[ { "uniprot_canonical_ac": "Q9SA08-1", "uniprot_ac": "Q9SA08", "uniprot_id": "Q9SA08_ARATH", "mass": { "chemical_mass": 76895.0, "monoisotopic_mass": 76895.0 }, "refseq": {}, "gene_names": [ { "name": "F28K20.8", "type": "synonym", "evidence": [ { "id": "Q9SA08", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SA08" } ] }, { "name": "F28K20_8", "type": "synonym", "evidence": [ { "id": "Q9SA08", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SA08" } ] } ], "protein_names": [ { "name": "K-box region protein (DUF1985)", "type": "synonym", "evidence": [ { "id": "Q9SA08", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SA08/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9SA08", "url": "https://www.uniprot.org/uniprotkb/Q9SA08" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9SA08", "locus": {} } ], "crossref": [ { "id": "AT1G31150", "url": "https://bar.utoronto.ca/thalemine/portal.do?externalids=AT1G31150", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "840000", "url": "https://www.ncbi.nlm.nih.gov/gene/840000", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR002487", "url": "https://www.ebi.ac.uk/interpro/entry/IPR002487", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR015410", "url": "https://www.ebi.ac.uk/interpro/entry/IPR015410", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT1G31150", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT1G31150", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "QLMAFQC", "url": "https://omabrowser.org/oma/group/QLMAFQC/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A1P8AQ83", "url": "https://www.orthodb.org/?gene=A0A1P8AQ83", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "Q9SA08", "url": "https://www.orthodb.org/?gene=Q9SA08", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR48449", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR48449", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR48449:SF1", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR48449:SF1", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF01486", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF01486", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF09331", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF09331", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "AT1G31150", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT1G31150", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "A0A1P8AQ83", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AQ83", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A1P8AQ83-1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AQ83-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9SA08", "url": "https://www.uniprot.org/uniprotkb/Q9SA08", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9SA08-1", "url": "https://www.uniprot.org/uniprotkb/Q9SA08-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MNQIKDPNPNLPERLFAVDCYPDKARLNIYSRPEYLGTIANLLKGSEEWERIKSSQFGKLFEFPVARCSHSGKLIHGLLSRQVVTKKKHELWFVFGGHPIRFSIREFHIVTGLRCGKLPTEDEVKKHQDSKYLSVWNRLFGEKRMVTIGDVLEMLQKKKLSSWKKLCLALIVIVDGVVVCNDQSFVTLDFVEMLNDIDFFLEYPWGRKAFLATIRRFGPPKDAPNPLGKLKKRLKQKTSACYGFPLALQLQVFESIPVILERIKDPNDLRDFTERSSEGLSIAFLLRKSYILDAEVDDKLVVAHTLEPKGMINESELVWETEVSDPKVDYILRLINEGHCFKPFEWPHLKAANQEVNIPDIDGDSLEDVTDVSQARPKKPLTRSSKKEKEVVKPPSIHKHTSQEKIKAKVHVGGESNDPGYVTLAYLNDMKEWILKQNQDLRNKIREDVKEIVVGPKSPAGGASNLRQSNRLNTNSKGKTDASPPKKTGNTETRKRKRKQVEVHSLSSGSESAGDIEGEEDVQSTWKEDGNAPSSGTFDECDDYGGALKITQEGDVMQEESDFDHCSSNCTKMKESMMREIENLELKLQLYGGHGLNNLTYDELLHFEHQLESSLHIARAHKQEQQQQQTDKLKENLMVCQRHEDDDIMHRQVKKENPPAFFSSSRRHNQPQD", "length": 673, "header": "tr|Q9SA08-1|Q9SA08_ARATH Isoform 1 of K-box region protein (DUF1985) OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SA08-1" }, "isoforms": [ { "isoform_ac": "A0A1P8AQ83-1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AQ83/entry", "sequence": { "sequence": "MNQIKDPNPNLPERLFAVDCYPDKARLNIYSRPEYLGTIANLLKGSEEWERIKSSQFGKLFEFPVARCSHSGKLIHGLLSRQVVTKKKHELWFVFGGHPIRFSIREFHIVTGLRCGKLPTEDEVKKHQDSKYLSVWNRLFGEKRMVTIGDVLEMLQKKKLSSWKKLCLALIVIVDGVVVCNDQSFVTLDFVEMLNDIDFFLEYPWGRKAFLATIRRFGPPKDAPNPLGKLKKRLKQKTSACYGFPLALQLQVFESIPVILERIKDPNDLRDFTERSSEGLSIAFLLRKSYILDAEVDDKLVVAHTLEPKGMINESELVWETEVSDPKVDYILRLINEGHCFKPFEWPHLKAANQEVNIPDIDGDSLEDVTDVSQARPKKPLTRSSKKEKEVVKPPSIHKHTSQEKIKAKVHVGGESNDPGYVTLAYLNDMKEWILKQNQDLRNKIREDVKEIVVGPKSPAGGASNLRQSNRLNTNSKGKTDASPPKKTGNTETRKRKRKQVEVHSLSSGSESAGDIEGEEDVQSTWKEDGNAPSSGTFDECDDYGGALKITQEGDVMQEESDFDHCSSNCTKMKESMMREIENLELKLQLYGGHGLNNLTYDELLHFEHQLESSLHIARAHKF", "length": 623, "header": "tr|A0A1P8AQ83-1|A0A1P8AQ83_ARATH Computationally mapped isoform of K-box region protein (DUF1985) OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SA08-1" }, "locus": { "chromosome": "1", "start_pos": 11119865, "end_pos": 11122667, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT1G31150.2", "url": "https://www.ensemblgenomes.org/id/AT1G31150.2" }, { "database": "Ensembl Peptide", "id": "AT1G31150.2", "url": "https://www.ensemblgenomes.org/id/AT1G31150.2" } ] } }, { "isoform_ac": "Q9SA08-1", "url": "https://www.uniprot.org/uniprotkb/Q9SA08/entry", "sequence": { "sequence": "MNQIKDPNPNLPERLFAVDCYPDKARLNIYSRPEYLGTIANLLKGSEEWERIKSSQFGKLFEFPVARCSHSGKLIHGLLSRQVVTKKKHELWFVFGGHPIRFSIREFHIVTGLRCGKLPTEDEVKKHQDSKYLSVWNRLFGEKRMVTIGDVLEMLQKKKLSSWKKLCLALIVIVDGVVVCNDQSFVTLDFVEMLNDIDFFLEYPWGRKAFLATIRRFGPPKDAPNPLGKLKKRLKQKTSACYGFPLALQLQVFESIPVILERIKDPNDLRDFTERSSEGLSIAFLLRKSYILDAEVDDKLVVAHTLEPKGMINESELVWETEVSDPKVDYILRLINEGHCFKPFEWPHLKAANQEVNIPDIDGDSLEDVTDVSQARPKKPLTRSSKKEKEVVKPPSIHKHTSQEKIKAKVHVGGESNDPGYVTLAYLNDMKEWILKQNQDLRNKIREDVKEIVVGPKSPAGGASNLRQSNRLNTNSKGKTDASPPKKTGNTETRKRKRKQVEVHSLSSGSESAGDIEGEEDVQSTWKEDGNAPSSGTFDECDDYGGALKITQEGDVMQEESDFDHCSSNCTKMKESMMREIENLELKLQLYGGHGLNNLTYDELLHFEHQLESSLHIARAHKQEQQQQQTDKLKENLMVCQRHEDDDIMHRQVKKENPPAFFSSSRRHNQPQD", "length": 673, "header": "tr|Q9SA08-1|Q9SA08_ARATH Isoform 1 of K-box region protein (DUF1985) OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SA08-1" }, "locus": { "chromosome": "1", "start_pos": 11119827, "end_pos": 11122675, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT1G31150.1", "url": "https://www.ensemblgenomes.org/id/AT1G31150.1" }, { "database": "Ensembl Peptide", "id": "AT1G31150.1", "url": "https://www.ensemblgenomes.org/id/AT1G31150.1" } ] } } ], "glycosylation": [], "phosphorylation": [ { "start_pos": 458, "end_pos": 458, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SA08", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SA08" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ], "site_lbl": "Ser458" } ], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of 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D, Yu G, Fraser C M, Venter J C, Davis R W", "evidence": [ { "database": "UniProtKB", "id": "Q9SA08", "url": "https://www.uniprot.org/uniprotkb/Q9SA08" } ], "reference": [ { "type": "PubMed", "id": "11130712", "url": "https://glygen.org/publication/PubMed/11130712" } ] }, { "title": "Quantitative phosphoproteomics of the ataxia telangiectasia-mutated (ATM) and ataxia telangiectasia-mutated and rad3-related (ATR) dependent DNA damage response in Arabidopsis thaliana.", "journal": "Molecular & cellular proteomics : MCP", "date": "2015-03", "authors": "Roitinger Elisabeth, Hofer Manuel, K\u00f6cher Thomas, Pichler Peter, Novatchkova Maria, Yang Jianhua, Schl\u00f6gelhofer Peter, Mechtler Karl", "evidence": [ { "database": "iPTMnet", "id": "Q9SA08", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SA08" } ], "reference": [ { "type": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9SA08", "url": "https://www.uniprot.org/uniprotkb/Q9SA08" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT1G31150", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT1G31150", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "DNA-binding transcription factor activity", "id": "GO:0003700", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003700", "evidence": [ { "database": "UniProtKB", "id": "Q9SA08", "url": "https://www.uniprot.org/uniprotkb/Q9SA08" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q9SA08", "url": "https://www.uniprot.org/uniprotkb/Q9SA08" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 313, "end_pos": 315, "annotation": "n_glycosylation_sequon" }, { "start_pos": 569, "end_pos": 571, "annotation": "n_glycosylation_sequon" }, { "start_pos": 598, "end_pos": 600, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "Q9SA08", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SA08" }, { "id": "PS51297", "database": "PROSITE", "url": "https://prosite.expasy.org/PS51297" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "K-box", "eco_id": "ECO_0000259", "start_pos": 567, "end_pos": 659, "start_aa": "Ser", "end_aa": "Pro", "glycosite_overlap": [] } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [ 458 ], "sequon_annotation_sites": [ { "start_pos": 313, "end_pos": 315 }, { "start_pos": 569, "end_pos": 571 }, { "start_pos": 598, "end_pos": 600 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 } ], "sort_fields": [ "start_pos", "end_pos", "kinase_uniprot_canonical_ac", "kinase_gene_name", "residue", "comment", "site_lbl" ] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 3 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "Q9SA13-1", "uniprot_ac": "Q9SA13", "uniprot_id": "Q9SA13_ARATH", "mass": { "chemical_mass": 13493.0, "monoisotopic_mass": 13493.0 }, "refseq": { "ac": "NP_001321341", "name": "cytochrome C oxidase biogenesis Cmc1-like protein", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001321341" }, "gene_names": [], "protein_names": [ { "name": "Cytochrome C oxidase biogenesis Cmc1-like protein", "type": "synonym", "evidence": [ { "id": "Q9SA13", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SA13/entry#names_and_taxonomy" } ] }, { "name": "cytochrome C oxidase biogenesis Cmc1-like protein", "type": "synonym", "evidence": [ { "id": "NP_001321341", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001321341" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9SA13", "url": "https://www.uniprot.org/uniprotkb/Q9SA13" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9SA13", "locus": {} } ], "crossref": [ { "id": "840005", "url": "https://www.ncbi.nlm.nih.gov/gene/840005", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "ath:AT1G31175", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT1G31175", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "NALRECH", "url": "https://omabrowser.org/oma/group/NALRECH/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "NP_001321341", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001321341", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT1G31175", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT1G31175", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9SA13", "url": "https://www.uniprot.org/uniprotkb/Q9SA13", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": 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{ "title": "Targeted quantitative phosphoproteomics approach for the detection of phospho-tyrosine signaling in plants.", "journal": "Journal of proteome research", "date": "2012-01-01", "authors": "Mithoe Sharon C, Boersema Paul J, Berke Lidija, Snel Berend, Heck Albert J R, Menke Frank L H", "evidence": [ { "database": "iPTMnet", "id": "Q9SA13", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SA13" } ], "reference": [ { "type": "PubMed", "id": "22074104", "url": "https://glygen.org/publication/PubMed/22074104" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9SA13", "url": "https://www.uniprot.org/uniprotkb/Q9SA13" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": 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"sequence": { "sequence": "MAADVSSLVRILSRFKDDRTVVKDSTGPRSTVALMTRDLLGIGGCVGGGGGGDEQSLELDLDVQVPNGWEKRLDLKSGKVYLQQQCNSTSSSSSSHHHHHHHEDQTNQTVPRFQDLNVPPISDKFPAKPLLSLFDDDDDTSLELKLVPSSISRPLPPPLSSFSPNQSLSYLSSVCTLDKVKLALERAEKDTKKRQSPEDDGVYDGTASATVAASQVAAGCPGCLSYVFVAKNNPKCPRCHSFVPLPAMKKPKIDLNISM", "length": 259, "header": "tr|Q9SA48-1|Q9SA48_ARATH Isoform 1 of Filamentous hemagglutinin transporter OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9SA48-1" }, "isoforms": [ { "isoform_ac": "Q9SA48-1", "url": "https://www.uniprot.org/uniprotkb/Q9SA48/entry", "sequence": { "sequence": "MAADVSSLVRILSRFKDDRTVVKDSTGPRSTVALMTRDLLGIGGCVGGGGGGDEQSLELDLDVQVPNGWEKRLDLKSGKVYLQQQCNSTSSSSSSHHHHHHHEDQTNQTVPRFQDLNVPPISDKFPAKPLLSLFDDDDDTSLELKLVPSSISRPLPPPLSSFSPNQSLSYLSSVCTLDKVKLALERAEKDTKKRQSPEDDGVYDGTASATVAASQVAAGCPGCLSYVFVAKNNPKCPRCHSFVPLPAMKKPKIDLNISM", "length": 259, "header": "tr|Q9SA48-1|Q9SA48_ARATH Isoform 1 of Filamentous hemagglutinin transporter OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 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"https://www.uniprot.org/uniprotkb/Q9SA95-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MSTTIRFLRIVTSRAMSSSWSCNKCTFLNSASQKLNCMICLAPVSLPSLSPPPPSLSISANDEAKWACKACTFLNTYKNSICDVCGTRSPTSSLLGFQDLTDSGLESNDADSSVGSVFFPLRRCIKRKAMDDDVVEVDGASVVCSESQGVMKKNKEIETKGVASDSGTPLTCLKILSYNVWFREDLELNLRMRAIGHLIQLHSPHLICFQEVTPEIYDIFRKSNWWKAYSCSVSVDVAVSRGYYCMLLSKLGVKSFSSKSFGNSIMGRELSIAEVEVPGRKPLVFATSHLESPCPGPPKWDQMFSRERVEQAKEAIEILRPNANVIFGGDMNWCDKLDGKFPLPDKWVDVWEVLKPGDLGFTYDTKANPMLSGNRALQKRLDRILCRLDDYKLGGIEMVGKEAIPGLSYVKEKKVRGDIKKLELPVLPSDHFGLLVTLSPK", "length": 441, "header": "tr|Q9SA95-1|Q9SA95_ARATH Isoform 1 of Endonuclease/exonuclease/phosphatase family protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SA95-1" }, "isoforms": [ { "isoform_ac": "Q9SA95-1", "url": "https://www.uniprot.org/uniprotkb/Q9SA95/entry", "sequence": { "sequence": 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Lee J M, Lenz C A, Li J H, Li Y, Lin X, Liu S X, Liu Z A, Luros J S, Maiti R, Marziali A, Militscher J, Miranda M, Nguyen M, Nierman W C, Osborne B I, Pai G, Peterson J, Pham P K, Rizzo M, Rooney T, Rowley D, Sakano H, Salzberg S L, Schwartz J R, Shinn P, Southwick A M, Sun H, Tallon L J, Tambunga G, Toriumi M J, Town C D, Utterback T, Van Aken S, Vaysberg M, Vysotskaia V S, Walker M, Wu D, Yu G, Fraser C M, Venter J C, Davis R W", "evidence": [ { "database": "UniProtKB", "id": "Q9SA95", "url": "https://www.uniprot.org/uniprotkb/Q9SA95" } ], "reference": [ { "type": "PubMed", "id": "11130712", "url": "https://glygen.org/publication/PubMed/11130712" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9SA95", "url": 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Southwick A M, Sun H, Tallon L J, Tambunga G, Toriumi M J, Town C D, Utterback T, Van Aken S, Vaysberg M, Vysotskaia V S, Walker M, Wu D, Yu G, Fraser C M, Venter J C, Davis R W", "evidence": [ { "database": "UniProtKB", "id": "Q9SAC4", "url": "https://www.uniprot.org/uniprotkb/Q9SAC4" } ], "reference": [ { "type": "PubMed", "id": "11130712", "url": "https://glygen.org/publication/PubMed/11130712" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9SAC4", "url": "https://www.uniprot.org/uniprotkb/Q9SAC4" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT1G10780", "name": "", "url": 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Goldsmith A D, Haas B, Hansen N F, Hughes B, Huizar L, Hunter J L, Jenkins J, Johnson-Hopson C, Khan S, Khaykin E, Kim C J, Koo H L, Kremenetskaia I, Kurtz D B, Kwan A, Lam B, Langin-Hooper S, Lee A, Lee J M, Lenz C A, Li J H, Li Y, Lin X, Liu S X, Liu Z A, Luros J S, Maiti R, Marziali A, Militscher J, Miranda M, Nguyen M, Nierman W C, Osborne B I, Pai G, Peterson J, Pham P K, Rizzo M, Rooney T, Rowley D, Sakano H, Salzberg S L, Schwartz J R, Shinn P, Southwick A M, Sun H, Tallon L J, Tambunga G, Toriumi M J, Town C D, Utterback T, Van Aken S, Vaysberg M, Vysotskaia V S, Walker M, Wu D, Yu G, Fraser C M, Venter J C, Davis R W", "evidence": [ { "database": "UniProtKB", "id": "Q9SAE0", "url": "https://www.uniprot.org/uniprotkb/Q9SAE0" } ], "reference": [ { "type": "PubMed", "id": "11130712", "url": "https://glygen.org/publication/PubMed/11130712" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", 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"MTEENDYGGNQKILHQGSGTIPALADEELMGDDDEYDDLYSDVNVGESFFQAHNQPQPPAQVNTSNASLQAQNSHVAAEPRMGIVSGGTVEGKYRNDGGHNGISGPDTRSDVYPQASSFGAKGLNIDIQSNKIAQQGSTTVVLNNHGFSGNAVNVPEMPVHNSYGAPPQGAQQIPVSQMSVNPNVMMNKSPTQSFVVDNGNTMLFVGELHWWTTDAEIESVLSQYGRVKEIKFFDERVSGKSKGYCQVEFYDSAAAAACKEGMNGFIFNGKACVVAFASPETLKQMGANFTGRNQGQNQIQNRRPLNEGMGRGNNNNNNMNTQNGDGGRNYGRGGFARGGQGMGNRGGAWGGAMRGRGVNNMASGSGAGPYGPGLAGPAFGGMMHPQGMMGAGGFDPTFMGRGAGYGGYSGIAYPGMPHSYPGVNAMGMVGIAPHVNPAFFGTGMGTMGSSGMNGVHAAAMWSEANGGGGEEGGSEYGGYEDETQEKEEKPSRDKERATTERDWSENSGDRRHKSHREEKDSHREYKQQRDRDSDEFDRGQSSLKSRSRSRMSEDDHRSRSRDADYGKRRRGD", "length": 573, "header": "tr|Q9SAF2-1|Q9SAF2_ARATH Isoform 1 of RNA-binding (RRM/RBD/RNP motifs) family protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SAF2-1" }, "isoforms": [ { "isoform_ac": "Q9SAF2-1", "url": "https://www.uniprot.org/uniprotkb/Q9SAF2/entry", "sequence": { "sequence": "MTEENDYGGNQKILHQGSGTIPALADEELMGDDDEYDDLYSDVNVGESFFQAHNQPQPPAQVNTSNASLQAQNSHVAAEPRMGIVSGGTVEGKYRNDGGHNGISGPDTRSDVYPQASSFGAKGLNIDIQSNKIAQQGSTTVVLNNHGFSGNAVNVPEMPVHNSYGAPPQGAQQIPVSQMSVNPNVMMNKSPTQSFVVDNGNTMLFVGELHWWTTDAEIESVLSQYGRVKEIKFFDERVSGKSKGYCQVEFYDSAAAAACKEGMNGFIFNGKACVVAFASPETLKQMGANFTGRNQGQNQIQNRRPLNEGMGRGNNNNNNMNTQNGDGGRNYGRGGFARGGQGMGNRGGAWGGAMRGRGVNNMASGSGAGPYGPGLAGPAFGGMMHPQGMMGAGGFDPTFMGRGAGYGGYSGIAYPGMPHSYPGVNAMGMVGIAPHVNPAFFGTGMGTMGSSGMNGVHAAAMWSEANGGGGEEGGSEYGGYEDETQEKEEKPSRDKERATTERDWSENSGDRRHKSHREEKDSHREYKQQRDRDSDEFDRGQSSLKSRSRSRMSEDDHRSRSRDADYGKRRRGD", "length": 573, "header": "tr|Q9SAF2-1|Q9SAF2_ARATH Isoform 1 of RNA-binding (RRM/RBD/RNP motifs) family protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SAF2-1" }, "locus": { "chromosome": "1", "start_pos": 4498764, "end_pos": 4501624, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT1G13190.1", "url": "https://www.ensemblgenomes.org/id/AT1G13190.1" }, { "database": "Ensembl Peptide", "id": "AT1G13190.1", "url": "https://www.ensemblgenomes.org/id/AT1G13190.1" } ] } } ], "glycosylation": [], "phosphorylation": [ { "start_pos": 505, "end_pos": 505, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SAF2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SAF2" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ], "site_lbl": "Ser505" }, { "start_pos": 508, "end_pos": 508, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SAF2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SAF2" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ], "site_lbl": "Ser508" }, { "start_pos": 534, "end_pos": 534, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SAF2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SAF2" }, { "database": "PubMed", "id": "19376835", "url": "https://glygen.org/publication/PubMed/19376835" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ], "site_lbl": "Ser534" }, { "start_pos": 553, "end_pos": 553, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SAF2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SAF2" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ], "site_lbl": "Ser553" } ], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Theologis A, Ecker J R, Palm C J, Federspiel N A, Kaul S, White O, Alonso J, Altafi H, Araujo R, Bowman C L, Brooks S Y, Buehler E, Chan A, Chao Q, Chen H, Cheuk R F, Chin C W, Chung M K, Conn L, Conway A B, Conway A R, Creasy T H, Dewar K, Dunn P, Etgu P, Feldblyum T V, Feng J, Fong B, Fujii C Y, Gill J E, Goldsmith A D, Haas B, Hansen N F, Hughes B, Huizar L, Hunter J L, Jenkins J, Johnson-Hopson C, Khan S, Khaykin E, Kim C J, Koo H L, Kremenetskaia I, Kurtz D B, Kwan A, Lam B, Langin-Hooper S, Lee A, Lee J M, Lenz C A, Li J H, Li Y, Lin X, Liu S X, Liu Z A, Luros J S, Maiti R, Marziali A, Militscher J, Miranda M, Nguyen M, Nierman W C, Osborne B I, Pai G, Peterson J, Pham P K, Rizzo M, Rooney T, Rowley D, Sakano H, Salzberg S L, Schwartz J R, Shinn P, Southwick A M, Sun H, Tallon L J, Tambunga G, Toriumi M J, Town C D, Utterback T, Van Aken S, Vaysberg M, Vysotskaia V S, Walker M, Wu D, Yu G, Fraser C M, Venter J C, Davis R W", "evidence": [ { "database": "UniProtKB", "id": "Q9SAF2", "url": "https://www.uniprot.org/uniprotkb/Q9SAF2" } ], "reference": [ { "type": "PubMed", "id": "11130712", "url": "https://glygen.org/publication/PubMed/11130712" } ] }, { "title": "Large-scale Arabidopsis phosphoproteome profiling reveals novel chloroplast kinase substrates and phosphorylation networks.", "journal": "Plant physiology", "date": "2009-06", "authors": "Reiland Sonja, Messerli Ga\u00eblle, Baerenfaller Katja, Gerrits Bertran, Endler Anne, Grossmann Jonas, Gruissem Wilhelm, Baginsky Sacha", "evidence": [ { "database": "iPTMnet", "id": "Q9SAF2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SAF2" } ], "reference": [ { "type": "PubMed", "id": "19376835", "url": "https://glygen.org/publication/PubMed/19376835" } ] }, { "title": "Comparative large-scale characterisation of plant vs. mammal proteins reveals similar and idiosyncratic N-alpha acetylation features.", "journal": "Mol. Cell. Proteomics", "date": "2012", "authors": "Bienvenut WV, Sumpton D, Martinez A, Lilla S, Espagne C, Meinnel T, Giglione C", "evidence": [ { "database": "UniProtKB", "id": "Q9SAF2", "url": "https://www.uniprot.org/uniprotkb/Q9SAF2" } ], "reference": [ { "type": "PubMed", "id": "22223895", "url": "https://glygen.org/publication/PubMed/22223895" } ] }, { "title": "Genetics and phosphoproteomics reveal a protein phosphorylation network in the abscisic acid signaling pathway in Arabidopsis thaliana.", "journal": "Science signaling", "date": "2013-04-09", "authors": "Umezawa Taishi, Sugiyama Naoyuki, Takahashi Fuminori, Anderson Jeffrey C, Ishihama Yasushi, Peck Scott C, Shinozaki Kazuo", "evidence": [ { "database": "iPTMnet", "id": "Q9SAF2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SAF2" } ], "reference": [ { "type": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" } ] }, { "title": "Quantitative phosphoproteomics of the ataxia telangiectasia-mutated (ATM) and ataxia telangiectasia-mutated and rad3-related (ATR) dependent DNA damage response in Arabidopsis thaliana.", "journal": "Molecular & cellular proteomics : MCP", "date": "2015-03", "authors": "Roitinger Elisabeth, Hofer Manuel, K\u00f6cher Thomas, Pichler Peter, Novatchkova Maria, Yang Jianhua, Schl\u00f6gelhofer Peter, Mechtler Karl", "evidence": [ { "database": "iPTMnet", "id": "Q9SAF2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SAF2" } ], "reference": [ { "type": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9SAF2", "url": "https://www.uniprot.org/uniprotkb/Q9SAF2" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] }, { "title": "Capturing the phosphorylation and protein interaction landscape of the plant TOR kinase.", "journal": "Nature plants", "date": "2019-03", "authors": "Van Leene Jelle, Han Chao, Gadeyne Astrid, Eeckhout Dominique, Matthijs Caroline, Cannoot Bernard, De Winne Nancy, Persiau Geert, Van De Slijke Eveline, Van de Cotte Brigitte, Stes Elisabeth, Van Bel Michiel, Storme Veronique, Impens Francis, Gevaert Kris, Vandepoele Klaas, De Smet Ive, De Jaeger Geert", "evidence": [ { "database": "iPTMnet", "id": "Q9SAF2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SAF2" } ], "reference": [ { "type": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ], "pathway": [ { "id": "ath:AT1G13190", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT1G13190", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "mRNA binding", "id": "GO:0003729", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003729", "evidence": [ { "database": "UniProtKB", "id": "Q9SAF2", "url": "https://www.uniprot.org/uniprotkb/Q9SAF2" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q9SAF2", "url": "https://www.uniprot.org/uniprotkb/Q9SAF2" } ], "pmid": "" }, { "name": "mRNA cleavage and polyadenylation specificity factor complex", "id": "GO:0005847", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005847", "evidence": [ { "database": "UniProtKB", "id": "Q9SAF2", "url": "https://www.uniprot.org/uniprotkb/Q9SAF2" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "mRNA alternative polyadenylation", "id": "GO:0110104", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0110104", "evidence": [ { "database": "UniProtKB", "id": "Q9SAF2", "url": "https://www.uniprot.org/uniprotkb/Q9SAF2" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 188, "end_pos": 190, "annotation": "n_glycosylation_sequon" }, { "start_pos": 289, "end_pos": 291, "annotation": "n_glycosylation_sequon" }, { "start_pos": 63, "end_pos": 65, "annotation": "n_glycosylation_sequon" }, { "start_pos": 66, "end_pos": 68, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "Q9SAF2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SAF2" }, { "id": "PS50102", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50102" } ], "ann_type": "Domain_Extent_Annotation", 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"phosphorylation", "table_stats": [ { "field": "total", "count": 4 }, { "field": "total_sites", "count": 4 } ], "sort_fields": [ "start_pos", "end_pos", "kinase_uniprot_canonical_ac", "kinase_gene_name", "residue", "comment", "site_lbl" ] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 7 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "Q9SAF4-1", "uniprot_ac": "Q9SAF4", "uniprot_id": "FBK3_ARATH", "mass": { "chemical_mass": 50874.0, "monoisotopic_mass": 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"https://alphafold.ebi.ac.uk/entry/Q9SAF4", "database": "AlphaFoldDB", "categories": [] }, { "id": "AT1G13200", "url": "https://bar.utoronto.ca/thalemine/portal.do?externalids=AT1G13200", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "cd22157", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd22157", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "837880", "url": "https://www.ncbi.nlm.nih.gov/gene/837880", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR001810", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001810", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR006527", "url": "https://www.ebi.ac.uk/interpro/entry/IPR006527", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR011043", "url": "https://www.ebi.ac.uk/interpro/entry/IPR011043", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR015915", "url": "https://www.ebi.ac.uk/interpro/entry/IPR015915", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR017451", "url": "https://www.ebi.ac.uk/interpro/entry/IPR017451", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036047", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036047", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR050796", "url": "https://www.ebi.ac.uk/interpro/entry/IPR050796", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT1G13200", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT1G13200", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "VCIYMSG", "url": "https://omabrowser.org/oma/group/VCIYMSG/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR31672", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31672", "database": 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"url": "https://www.uniprot.org/uniprotkb/Q9SAF4-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MKDAEKREVIASSSLQRKRNRGRRLRKRRRRNEKRVLMVPSSLPNDVLEEIFLRFPVKALIRLKSLSKQWRSTIESRSFEERHLTIAKKAFVDHPKVMLVGEEDPIRGTGIRPDTDIGFRLFCLESASLLSFTRLNFPQGFFNWIYISESCDGLFCIHSPKSHSVYVVNPATRWLRLLPPAGFQILIHKFNPTEREWNVVMKSIFHLAFVKATDYKLVWLYNCDKYIVDASSPNVGVTKCEIFDFRKNAWRYLACTPSHQIFYYQKPASANGSVYWFTEPYNERIEVVAFDIQTETFRLLPKINPAIAGSDPHHIDMCTLDNSLCMSKREKDTMIQDIWRLKPSEDTWEKIFSIDLVSCPSSRTEKRDQFDWSKKDRVEPATPVAVCKNKKILLSHRYSRGLVKYDPLTKSIDFFSGHPTAYRKVIYFQSLISHL", "length": 435, "header": "sp|Q9SAF4-1|FBK3_ARATH Isoform 1 of Putative F-box/kelch-repeat protein At1g13200 OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9SAF4-1" }, "isoforms": [ { "isoform_ac": "Q9SAF4-1", "url": "https://www.uniprot.org/uniprotkb/Q9SAF4/entry#Q9SAF4-1", "sequence": { "sequence": 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"glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9SAG2", "locus": {} } ], "crossref": [ { "id": "AT1G80980", "url": "https://bar.utoronto.ca/thalemine/portal.do?externalids=AT1G80980", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "844438", "url": "https://www.ncbi.nlm.nih.gov/gene/844438", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "ath:AT1G80980", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT1G80980", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "HEPGHES", "url": "https://omabrowser.org/oma/group/HEPGHES/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR36339", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR36339", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR36339:SF2", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR36339:SF2", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "AT1G80980", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT1G80980", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9SAG2", "url": "https://www.uniprot.org/uniprotkb/Q9SAG2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9SAG2-1", "url": "https://www.uniprot.org/uniprotkb/Q9SAG2-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MIRGRGSWSGLSTRLKLYRTRRFCTKGENKLEKTESSVAHHSETESSVSRYDETYKKLDKLDFVTAAKILFTEPPKKNKFGFDWHVVQFIIVCLPSVAVYLVAQYARRKMKIMDAELGEKKRKEEEKKEKEEAEQKALQVEAATKSHEELMEMRQRLGKIEETIKEIVLETKKPSGNAPTKTQEDQSTKLSPKEVSQPEKEHKGNVQKPGDGPH", "length": 214, "header": "tr|Q9SAG2-1|Q9SAG2_ARATH Isoform 1 of Stress response NST1-like protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SAG2-1" }, "isoforms": [ { "isoform_ac": "Q9SAG2-1", "url": "https://www.uniprot.org/uniprotkb/Q9SAG2/entry", "sequence": { "sequence": "MIRGRGSWSGLSTRLKLYRTRRFCTKGENKLEKTESSVAHHSETESSVSRYDETYKKLDKLDFVTAAKILFTEPPKKNKFGFDWHVVQFIIVCLPSVAVYLVAQYARRKMKIMDAELGEKKRKEEEKKEKEEAEQKALQVEAATKSHEELMEMRQRLGKIEETIKEIVLETKKPSGNAPTKTQEDQSTKLSPKEVSQPEKEHKGNVQKPGDGPH", "length": 214, "header": "tr|Q9SAG2-1|Q9SAG2_ARATH Isoform 1 of Stress response NST1-like protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SAG2-1" }, "locus": { "chromosome": "1", "start_pos": 30422050, "end_pos": 30424152, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT1G80980.2", "url": "https://www.ensemblgenomes.org/id/AT1G80980.2" }, { "database": "Ensembl Peptide", "id": "AT1G80980.2", "url": "https://www.ensemblgenomes.org/id/AT1G80980.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Theologis A, Ecker J R, Palm C J, Federspiel N A, Kaul S, White O, Alonso J, Altafi H, Araujo R, Bowman C L, Brooks S Y, Buehler E, Chan A, Chao Q, Chen H, Cheuk R F, Chin C W, Chung M K, Conn L, Conway A B, Conway A R, Creasy T H, Dewar K, Dunn P, Etgu P, Feldblyum T V, Feng J, Fong B, Fujii C Y, Gill J E, Goldsmith A D, Haas B, Hansen N F, Hughes B, Huizar L, Hunter J L, Jenkins J, Johnson-Hopson C, Khan S, Khaykin E, Kim C J, Koo H L, Kremenetskaia I, Kurtz D B, Kwan A, Lam B, Langin-Hooper S, Lee A, Lee J M, Lenz C A, Li J H, Li Y, Lin X, Liu S X, Liu Z A, Luros J S, Maiti R, Marziali A, Militscher J, Miranda M, Nguyen M, Nierman W C, Osborne B I, Pai G, Peterson J, Pham P K, Rizzo M, Rooney T, Rowley D, Sakano H, Salzberg S L, Schwartz J R, Shinn P, Southwick A M, Sun H, Tallon L J, Tambunga G, Toriumi M J, Town C D, Utterback T, Van Aken S, Vaysberg M, Vysotskaia V S, Walker M, Wu D, Yu G, Fraser C M, Venter J C, Davis R W", "evidence": [ { "database": "UniProtKB", "id": "Q9SAG2", "url": "https://www.uniprot.org/uniprotkb/Q9SAG2" } ], "reference": [ { "type": "PubMed", "id": "11130712", "url": "https://glygen.org/publication/PubMed/11130712" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9SAG2", "url": "https://www.uniprot.org/uniprotkb/Q9SAG2" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT1G80980", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT1G80980", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "Q9SAG2", "url": "https://www.uniprot.org/uniprotkb/Q9SAG2" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": 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"categories": [ "Enzyme and Pathway" ] }, { "id": "LNTWIQS", "url": "https://omabrowser.org/oma/group/LNTWIQS/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR32153", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR32153", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00646", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00646", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PR:Q9SAG4", "url": "https://proconsortium.org/cgi-bin/entry_pro?id=PR:Q9SAG4", "database": "PRO", "categories": [ "Protein" ] }, { "id": "NP_178211", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_178211", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT1G80960", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT1G80960", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "A0A1P8AVU7", "url": 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"categories": [ "Protein" ] } ], "sequence": { "sequence": "MERSSSSSSSSCDKVWNLGLPYPTFTLANDDKPYLITVSDDHSVKVKNVDWISKLPDDVLLIILSRLSTEEAIRTSVVSKRWEHVWNQMSHLVFDMRKNIINSNNTLDGSNPVATLITQVINNHRGHLESCVIIHVPYQGGNGMLNSWIRLLSCVKRTKVLTLRYHYGTWDRKFKTFNFSPDSLSHPSLMSLSLHSYFLESSHPLRNCSNLRTLKLLSIVAPEIGVFNRVLASCPCLEVLVLGICCFKKSRVPLKIENKKLKLLQVSSLERIDAIEVSTTSLDILAIIDICCRRDDLSLQSPQLQFNRNFWVLGPYVPHISYNISEEKSIGNEEFVNTIYGELLRPFANLYVALSVSVDLMNPTEVERLRQVLGLWTRKILELEIIFKDNNGPREENKSWDKKLWEDNNKKDPFPNAKFRVDTVWMYNFSGSEEEFALMTCLIRQGTVVEKMMIKTSTFPARKRLKIEAAVAKLQALQTKLTIKCF", "length": 486, "header": "sp|Q9SAG4-1|FB93_ARATH Isoform 1 of F-box protein At1g80960 OS=Arabidopsis thaliana OX=3702 GN= PE=2 SV=3 CANONICAL=Q9SAG4-1" }, "isoforms": [ { "isoform_ac": "A0A1P8AVU7-1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AVU7/entry", "sequence": { "sequence": "MERSSSSSSSSCDKVWNLGLPYPTFTLANDDKPYLITVSDDHSVKVKNVDWISKLPDDVLLIILSRLSTEEAIRTSVVSKRWEHVWNQMSHLVFDMRKNIINSNNTLDGSNPVATLITQVINNHRGHLESCVIIHVPYQGGNGMLNSWIRLLSCVKRTKVLTLRYHYGTWDRKFKTFNFSPDSLSHPSLMSLSLHSYFLESSHPLRNCSNLRTLKLLSIVAPEIGVFNRVLASCPCLEVLVLGICCFKKSRVPLKIENKKLKLLQVSSLERIDAIEVSTTSLDILAIIDICCRRDDLSLQSPQLQFNRNFWVLGPYVPHISYNISEEKSIGNEEFVNTIYGELLRPFANLYVALSVSVDLMNPTEVERLRQVLGLWTRKILELEIIFKVCAYIRSS", "length": 396, "header": "tr|A0A1P8AVU7-1|A0A1P8AVU7_ARATH Computationally mapped isoform of F-box and Leucine Rich Repeat domains containing protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9SAG4-1" }, "locus": { "chromosome": "1", "start_pos": 30415987, "end_pos": 30418340, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT1G80960.5", "url": "https://www.ensemblgenomes.org/id/AT1G80960.5" }, { "database": "Ensembl Peptide", "id": "AT1G80960.5", "url": "https://www.ensemblgenomes.org/id/AT1G80960.5" } ] } }, { "isoform_ac": "A0A1P8AVZ7-1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AVZ7/entry", "sequence": { "sequence": "MVSSDQVKNVDWISKLPDDVLLIILSRLSTEEAIRTSVVSKRWEHVWNQMSHLVFDMRKNIINSNNTLDGSNPVATLITQVINNHRGHLESCVIIHVPYQGGNGMLNSWIRLLSCVKRTKVLTLRYHYGTWDRKFKTFNFSPDSLSHPSLMSLSLHSYFLESSHPLRNCSNLRTLKLLSIVAPEIGVFNRVLASCPCLEVLVLGICCFKKSRVPLKIENKKLKLLQVSSLERIDAIEVSTTSLDILAIIDICCRRDDLSLQSPQLQFNRNFWVLGPYVPHISYNISEEKSIGNEEFVNTIYGELLRPFANLYVALSVSVDLMNPTEVERLRQVLGLWTRKILELEIIFKDNNGPREENKSWDKKLWEDNNKKDPFPNAKFRVDTVWMYNFSGSEEEFALMTCLIRQGTVVEKMMIKTSTFPARKRLKIEAAVAKLQALQTKLTIKCF", "length": 447, "header": "tr|A0A1P8AVZ7-1|A0A1P8AVZ7_ARATH Computationally mapped isoform of F-box and Leucine Rich Repeat domains containing protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9SAG4-1" }, "locus": { "chromosome": "1", "start_pos": 30416608, "end_pos": 30418380, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT1G80960.6", "url": "https://www.ensemblgenomes.org/id/AT1G80960.6" }, { "database": "Ensembl Peptide", "id": "AT1G80960.6", "url": "https://www.ensemblgenomes.org/id/AT1G80960.6" } ] } }, { "isoform_ac": "F4HVT7-1", "url": "https://www.uniprot.org/uniprotkb/F4HVT7/entry", "sequence": { "sequence": "MERSSSSSSSSCDKVWNLGLPYPTFTLANDDKPYLITVSDDHSVKVKNVDWISKLPDDVLLIILSRLSTEEAIRTSVVSKRWEHVWNQMSHLVFDMRKNIINSNNTLDGSNPVATLITQVINNHRGHLESCVIIHVPYQGGNGMLNSWIRLLSCVKRTKVLTLRYHYGTWDRKFKTFNFSPDSLSHPSLMSLSLHSYFLESSHPLRNCSNLRTLKLLSIVAPEIGVFNRVLASCPCLEVLVLGICCFKKSRVPLKIENKKLKLLQVSSLERIDAIEVSTTSLDILAIIDICCRRDDLSLQSPQLQFNRNFWVLGPYVPHISYNISEEKSIGNEEFVNTIYEVERLRQVLGLWTRKILELEIIFKDNNGPREENKSWDKKLWEDNNKKDPFPNAKFRVDTVWMYNFSGSEEEFALMTCLIRQGTVVEKMMIKTSTFPARKRLKIEAAVAKLQALQTKLTIKCF", "length": 462, "header": "tr|F4HVT7-1|F4HVT7_ARATH Computationally mapped isoform of F-box and Leucine Rich Repeat domains containing protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9SAG4-1" }, "locus": { "chromosome": "1", "start_pos": 30415836, "end_pos": 30418291, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT1G80960.3", "url": "https://www.ensemblgenomes.org/id/AT1G80960.3" }, { "database": "Ensembl Peptide", "id": "AT1G80960.3", "url": "https://www.ensemblgenomes.org/id/AT1G80960.3" } ] } }, { "isoform_ac": "Q9SAG4-1", "url": "https://www.uniprot.org/uniprotkb/Q9SAG4/entry#Q9SAG4-1", "sequence": { "sequence": "MERSSSSSSSSCDKVWNLGLPYPTFTLANDDKPYLITVSDDHSVKVKNVDWISKLPDDVLLIILSRLSTEEAIRTSVVSKRWEHVWNQMSHLVFDMRKNIINSNNTLDGSNPVATLITQVINNHRGHLESCVIIHVPYQGGNGMLNSWIRLLSCVKRTKVLTLRYHYGTWDRKFKTFNFSPDSLSHPSLMSLSLHSYFLESSHPLRNCSNLRTLKLLSIVAPEIGVFNRVLASCPCLEVLVLGICCFKKSRVPLKIENKKLKLLQVSSLERIDAIEVSTTSLDILAIIDICCRRDDLSLQSPQLQFNRNFWVLGPYVPHISYNISEEKSIGNEEFVNTIYGELLRPFANLYVALSVSVDLMNPTEVERLRQVLGLWTRKILELEIIFKDNNGPREENKSWDKKLWEDNNKKDPFPNAKFRVDTVWMYNFSGSEEEFALMTCLIRQGTVVEKMMIKTSTFPARKRLKIEAAVAKLQALQTKLTIKCF", "length": 486, "header": "sp|Q9SAG4-1|FB93_ARATH Isoform 1 of F-box protein At1g80960 OS=Arabidopsis thaliana OX=3702 GN= PE=2 SV=3 CANONICAL=Q9SAG4-1" }, "locus": { "chromosome": "1", "start_pos": 30415123, "end_pos": 30418380, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT1G80960.1", "url": "https://www.ensemblgenomes.org/id/AT1G80960.1" }, { "database": "Ensembl Peptide", "id": "AT1G80960.1", "url": "https://www.ensemblgenomes.org/id/AT1G80960.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Theologis A, Ecker J R, Palm C J, Federspiel N A, Kaul S, White O, Alonso J, Altafi H, Araujo R, Bowman C L, Brooks S Y, Buehler E, Chan A, Chao Q, Chen H, Cheuk R F, Chin C W, Chung M K, Conn L, Conway A B, Conway A R, Creasy T H, Dewar K, Dunn P, Etgu P, Feldblyum T V, Feng J, Fong B, Fujii C Y, Gill J E, Goldsmith A D, Haas B, Hansen N F, Hughes B, Huizar L, Hunter J L, Jenkins J, Johnson-Hopson C, Khan S, Khaykin E, Kim C J, Koo H L, Kremenetskaia I, Kurtz D B, Kwan A, Lam B, Langin-Hooper S, Lee A, Lee J M, Lenz C A, Li J H, Li Y, Lin X, Liu S X, Liu Z A, Luros J S, Maiti R, Marziali A, Militscher J, Miranda M, Nguyen M, Nierman W C, Osborne B I, Pai G, Peterson J, Pham P K, Rizzo M, Rooney T, Rowley D, Sakano H, Salzberg S L, Schwartz J R, Shinn P, Southwick A M, Sun H, Tallon L J, Tambunga G, Toriumi M J, Town C D, Utterback T, Van Aken S, Vaysberg M, Vysotskaia V S, Walker M, Wu D, Yu G, Fraser C M, Venter J C, Davis R W", "evidence": [ { "database": "UniProtKB", "id": "Q9SAG4", "url": "https://www.uniprot.org/uniprotkb/Q9SAG4" } ], "reference": [ { "type": "PubMed", "id": "11130712", "url": "https://glygen.org/publication/PubMed/11130712" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9SAG4", "url": "https://www.uniprot.org/uniprotkb/Q9SAG4" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT1G80960", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT1G80960", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q9SAG4", "url": "https://www.uniprot.org/uniprotkb/Q9SAG4" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 104, "end_pos": 106, "annotation": "n_glycosylation_sequon" }, { "start_pos": 178, "end_pos": 180, "annotation": "n_glycosylation_sequon" }, { "start_pos": 207, "end_pos": 209, "annotation": "n_glycosylation_sequon" }, { "start_pos": 323, "end_pos": 325, "annotation": "n_glycosylation_sequon" }, { "start_pos": 397, "end_pos": 399, "annotation": "n_glycosylation_sequon" }, { "start_pos": 428, "end_pos": 430, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-Q9SAG4-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 486, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-Q9SAG4-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/Q9SAG4" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "Q9SAG4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SAG4" }, { "id": "PRU00080", "database": "PROSITE", "url": "https://prosite.expasy.org/PRU00080" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "F-box", "eco_id": "ECO_0000255", "start_pos": 49, "end_pos": 97, "start_aa": "Val", "end_aa": "Arg", "glycosite_overlap": [] } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 104, "end_pos": 106 }, { "start_pos": 178, "end_pos": 180 }, { "start_pos": 207, "end_pos": 209 }, { "start_pos": 323, "end_pos": 325 }, { "start_pos": 397, "end_pos": 399 }, { "start_pos": 428, "end_pos": 430 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": 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"total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "Q9SAG7-1", "uniprot_ac": "Q9SAG7", "uniprot_id": "Q9SAG7_ARATH", "mass": { "chemical_mass": 104017.0, "monoisotopic_mass": 104017.0 }, "refseq": {}, "gene_names": [ { "name": "F23A5.29", "type": "synonym", "evidence": [ { "id": "Q9SAG7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SAG7" } ] }, { "name": "F23A5_29", "type": "synonym", "evidence": [ { "id": "Q9SAG7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SAG7" } ] } ], "protein_names": [ { "name": "MIF4G domain-containing protein / MA3 domain-containing protein", "type": "synonym", "evidence": [ { "id": "Q9SAG7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SAG7/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9SAG7", "url": "https://www.uniprot.org/uniprotkb/Q9SAG7" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9SAG7", "locus": {} } ], "crossref": [ { "id": "AT1G80930", "url": "https://bar.utoronto.ca/thalemine/portal.do?externalids=AT1G80930", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "844433", "url": "https://www.ncbi.nlm.nih.gov/gene/844433", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "Q9SAG7", "url": "https://www.ebi.ac.uk/intact/interactors/id:Q9SAG7*", "database": "IntAct", "categories": [ "Other" ] }, { "id": "IPR003890", "url": "https://www.ebi.ac.uk/interpro/entry/IPR003890", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR003891", "url": "https://www.ebi.ac.uk/interpro/entry/IPR003891", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR016024", "url": "https://www.ebi.ac.uk/interpro/entry/IPR016024", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR050781", "url": "https://www.ebi.ac.uk/interpro/entry/IPR050781", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT1G80930", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT1G80930", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "ILTEDMR", "url": "https://omabrowser.org/oma/group/ILTEDMR/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR18034", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR18034", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR18034:SF3", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR18034:SF3", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF02847", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF02847", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF02854", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF02854", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "AT1G80930", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT1G80930", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9SAG7", "url": "https://www.uniprot.org/uniprotkb/Q9SAG7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9SAG7-1", "url": "https://www.uniprot.org/uniprotkb/Q9SAG7-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MGRHGSSSDEEERVRRRDRRRRERSPDVRRSRTETDDVARRVRVSDDEDRKSSRRDLEIGGTVADGEGRRGDKVRRKETSDDEELARRSRKDRKEANSGSEDDRGKRIEVDSDGDGERRVNKGRNTDRVRADTSSDEEDDLKGNKKEPMEVDDDYGRRGRRRSPKVMEKQGRERSHRGSRVIADKPSDEEDDRQRSRGGRRESQRKRRDHRASDDDEEGEIRSERRGKEKNDRGSEGLLKRDRRERDLTDGHENGSRRRESERKDRSRRDDGVRDEKERRHNDKYDDSQRDKLRKEDSRKREEKKIEVPKPKLAELNPSENNAMALGKTGGVYIPPFKLARMMKEVEDKSSVEYQRLTWDALRKSINGLVNKVNASNIKNIIPELFAENLIRGRGLFCRSCMKSQMASPGFTDVFAALVAVINAKFPEVAELLLKRVVLQLKRAYKRNDKPQLLAAVKFIAHLVNQQVAEEIIALELVTILLGDPTDDSVEVAVGFVTECGAMLQDVSPRGLNGIFERFRGILHEGEIDKRVQYLIESLFATRKAKFQGHPAVRPELDLVEEKYSHDLSLDHEIDPETALDIFKPDPDFVENEKKYEALKKELLGDEESEDEDGSDASSEDNDEEEDESDEEDEEQMRIRDETETNLVNLRRTIYLTIMSSVDFEEAGHKLLKIKLEPGQEMELCIMLLECCSQERTYLRYYGLLGQRFCMINKIHQENFEKCFVQQYSMIHRLETNKLRNVAKFFAHLLGTDALPWHVLAYIRLTEEDTTSSSRIFIKILFQELSEHLGIRLLNERLQDPTMQESLESIFPKDNPKNTRFAINFFTSIGLGGITENLREYLKNMPSLIMQRQKQVAESESGSSSGSDSSDSESESESGSSSSSSSDESDREKRKRRRRS", "length": 900, "header": "tr|Q9SAG7-1|Q9SAG7_ARATH Isoform 1 of MIF4G domain-containing protein / MA3 domain-containing protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SAG7-1" }, "isoforms": [ { "isoform_ac": "Q9SAG7-1", "url": "https://www.uniprot.org/uniprotkb/Q9SAG7/entry", "sequence": { "sequence": 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Huizar L, Hunter J L, Jenkins J, Johnson-Hopson C, Khan S, Khaykin E, Kim C J, Koo H L, Kremenetskaia I, Kurtz D B, Kwan A, Lam B, Langin-Hooper S, Lee A, Lee J M, Lenz C A, Li J H, Li Y, Lin X, Liu S X, Liu Z A, Luros J S, Maiti R, Marziali A, Militscher J, Miranda M, Nguyen M, Nierman W C, Osborne B I, Pai G, Peterson J, Pham P K, Rizzo M, Rooney T, Rowley D, Sakano H, Salzberg S L, Schwartz J R, Shinn P, Southwick A M, Sun H, Tallon L J, Tambunga G, Toriumi M J, Town C D, Utterback T, Van Aken S, Vaysberg M, Vysotskaia V S, Walker M, Wu D, Yu G, Fraser C M, Venter J C, Davis R W", "evidence": [ { "database": "UniProtKB", "id": "Q9SAG7", "url": "https://www.uniprot.org/uniprotkb/Q9SAG7" } ], "reference": [ { "type": "PubMed", "id": "11130712", "url": "https://glygen.org/publication/PubMed/11130712" } ] }, { "title": "Site-specific phosphorylation profiling of Arabidopsis proteins by mass spectrometry and peptide chip analysis.", "journal": "J. Proteome Res.", "date": "2008", "authors": "de la Fuente van Bentem Sergio, Anrather Dorothea, Dohnal Ilse, Roitinger Elisabeth, Csaszar Edina, Joore Jos, Buijnink Joshua, Carreri Alessandro, Forzani Celine, Lorkovic Zdravko J, Barta Andrea, Lecourieux David, Verhounig Andreas, Jonak Claudia, Hirt Heribert", "evidence": [ { "database": "UniProtKB", "id": "Q9SAG7", "url": "https://www.uniprot.org/uniprotkb/Q9SAG7" } ], "reference": [ { "type": "PubMed", "id": "18433157", "url": "https://glygen.org/publication/PubMed/18433157" } ] }, { "title": "Large-scale phosphorylation mapping reveals the extent of tyrosine phosphorylation in Arabidopsis.", "journal": "Molecular systems biology", "date": "2008", "authors": "Sugiyama Naoyuki, Nakagami Hirofumi, Mochida Keiichi, Daudi Arsalan, Tomita Masaru, Shirasu Ken, Ishihama Yasushi", "evidence": [ { "database": "iPTMnet", "id": "Q9SAG7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SAG7" } ], "reference": [ { "type": "PubMed", "id": "18463617", "url": "https://glygen.org/publication/PubMed/18463617" } ] }, { "title": "Phosphoproteomic analysis of nuclei-enriched fractions from Arabidopsis thaliana.", "journal": "J. Proteomics", "date": "2009", "authors": "Jones Alexandra M E, MacLean Daniel, Studholme David J, Serna-Sanz Antonio, Andreasson Erik, Rathjen John P, Peck Scott C", "evidence": [ { "database": "UniProtKB", "id": "Q9SAG7", "url": "https://www.uniprot.org/uniprotkb/Q9SAG7" } ], "reference": [ { "type": "PubMed", "id": "19245862", "url": "https://glygen.org/publication/PubMed/19245862" } ] }, { "title": "Large-scale Arabidopsis phosphoproteome profiling reveals novel chloroplast kinase substrates and phosphorylation networks.", "journal": "Plant Physiol.", "date": "2009", "authors": "Reiland Sonja, Messerli Ga\u00eblle, Baerenfaller Katja, Gerrits Bertran, Endler Anne, Grossmann Jonas, Gruissem Wilhelm, Baginsky Sacha", "evidence": [ { "database": "UniProtKB", "id": "Q9SAG7", "url": "https://www.uniprot.org/uniprotkb/Q9SAG7" }, { "database": "iPTMnet", "id": "Q9SAG7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SAG7" } ], "reference": [ { "type": "PubMed", "id": "19376835", "url": "https://glygen.org/publication/PubMed/19376835" } ] }, { "title": "Large-scale comparative phosphoproteomics identifies conserved phosphorylation sites in plants.", "journal": "Plant physiology", "date": "2010-07", "authors": "Nakagami Hirofumi, Sugiyama Naoyuki, Mochida Keiichi, Daudi Arsalan, Yoshida Yuko, Toyoda Tetsuro, Tomita Masaru, Ishihama Yasushi, Shirasu Ken", "evidence": [ { "database": "iPTMnet", "id": "Q9SAG7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SAG7" } ], "reference": [ { "type": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" } ] }, { "title": "Comparative phosphoproteome profiling reveals a function of the STN8 kinase in fine-tuning of cyclic electron flow (CEF).", "journal": "Proceedings of the National Academy of Sciences of the United States of America", "date": "2011-08-02", "authors": "Reiland Sonja, Finazzi Giovanni, Endler Anne, Willig Adrian, Baerenfaller Katja, Grossmann Jonas, Gerrits Bertran, Rutishauser Dorothea, Gruissem Wilhelm, Rochaix Jean-David, Baginsky Sacha", "evidence": [ { "database": "iPTMnet", "id": "Q9SAG7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SAG7" } ], "reference": [ { "type": "PubMed", "id": "21768351", "url": "https://glygen.org/publication/PubMed/21768351" } ] }, { "title": "Quantitative phosphoproteome profiling of iron-deficient Arabidopsis roots.", "journal": "Plant physiology", "date": "2012-05", "authors": "Lan Ping, Li Wenfeng, Wen Tuan-Nan, Schmidt Wolfgang", "evidence": [ { "database": "iPTMnet", "id": "Q9SAG7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SAG7" } ], "reference": [ { "type": "PubMed", "id": "22438062", "url": "https://glygen.org/publication/PubMed/22438062" } ] }, { "title": "Characterization of the phosphoproteome of mature Arabidopsis pollen.", "journal": "The Plant journal : for cell and molecular biology", "date": "2012-10", "authors": "Mayank Pururawa, Grossman Jonas, Wuest Samuel, Boisson-Dernier Aur\u00e9lien, Roschitzki Bernd, Nanni Paolo, N\u00fchse Thomas, Grossniklaus Ueli", "evidence": [ { "database": "iPTMnet", "id": "Q9SAG7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SAG7" } ], "reference": [ { "type": "PubMed", "id": "22631563", "url": "https://glygen.org/publication/PubMed/22631563" } ] }, { "title": "A large-scale protein phosphorylation analysis reveals novel phosphorylation motifs and phosphoregulatory networks in Arabidopsis.", "journal": "Journal of proteomics", "date": "2013-01-14", "authors": "Wang Xu, Bian Yangyang, Cheng Kai, Gu Li-Fei, Ye Mingliang, Zou Hanfa, Sun Samuel Sai-Ming, He Jun-Xian", "evidence": [ { "database": "iPTMnet", "id": "Q9SAG7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SAG7" } ], "reference": [ { "type": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" } ] }, { "title": "Quantitative phosphoproteomics after auxin-stimulated lateral root induction identifies an SNX1 protein phosphorylation site required for growth.", "journal": "Molecular & cellular proteomics : MCP", "date": "2013-05", "authors": "Zhang Hongtao, Zhou Houjiang, Berke Lidija, Heck Albert J R, Mohammed Shabaz, Scheres Ben, Menke Frank L H", "evidence": [ { "database": "iPTMnet", "id": "Q9SAG7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SAG7" } ], "reference": [ { "type": "PubMed", "id": "23328941", "url": "https://glygen.org/publication/PubMed/23328941" } ] }, { "title": "Genetics and phosphoproteomics reveal a protein phosphorylation network in the abscisic acid signaling pathway in Arabidopsis thaliana.", "journal": "Science signaling", "date": "2013-04-09", "authors": "Umezawa Taishi, Sugiyama Naoyuki, Takahashi Fuminori, Anderson Jeffrey C, Ishihama Yasushi, Peck Scott C, Shinozaki Kazuo", "evidence": [ { "database": "iPTMnet", "id": "Q9SAG7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SAG7" } ], "reference": [ { "type": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" } ] }, { "title": "Quantitative measurement of phosphoproteome response to osmotic stress in arabidopsis based on Library-Assisted eXtracted Ion Chromatogram (LAXIC).", "journal": "Molecular & cellular proteomics : MCP", "date": "2013-08", "authors": "Xue Liang, Wang Pengcheng, Wang Lianshui, Renzi Emily, Radivojac Predrag, Tang Haixu, Arnold Randy, Zhu Jian-Kang, Tao W Andy", "evidence": [ { "database": "iPTMnet", "id": "Q9SAG7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SAG7" } ], "reference": [ { "type": "PubMed", "id": "23660473", "url": "https://glygen.org/publication/PubMed/23660473" } ] }, { "title": "Quantitative phosphoproteomics identifies SnRK2 protein kinase substrates and reveals the effectors of abscisic acid action.", "journal": "Proceedings of the National Academy of Sciences of the United States of America", "date": "2013-07-02", "authors": "Wang Pengcheng, Xue Liang, Batelli Giorgia, Lee Shinyoung, Hou Yueh-Ju, Van Oosten Michael J, Zhang Huiming, Tao W Andy, Zhu Jian-Kang", "evidence": [ { "database": "iPTMnet", "id": "Q9SAG7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SAG7" } ], "reference": [ { "type": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" } ] }, { "title": "Stable isotope metabolic labeling-based quantitative phosphoproteomic analysis of Arabidopsis mutants reveals ethylene-regulated time-dependent phosphoproteins and putative substrates of constitutive triple response 1 kinase.", "journal": "Molecular & cellular proteomics : MCP", "date": "2013-12", "authors": "Yang Zhu, Guo Guangyu, Zhang Manyu, Liu Claire Y, Hu Qin, Lam Henry, Cheng Han, Xue Yu, Li Jiayang, Li Ning", "evidence": [ { "database": "iPTMnet", "id": "Q9SAG7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SAG7" } ], "reference": [ { "type": "PubMed", "id": "24043427", "url": "https://glygen.org/publication/PubMed/24043427" } ] }, { "title": "Quantitative phosphoproteomics of the ataxia telangiectasia-mutated (ATM) and ataxia telangiectasia-mutated and rad3-related (ATR) dependent DNA damage response in Arabidopsis thaliana.", "journal": "Molecular & cellular proteomics : MCP", "date": "2015-03", "authors": "Roitinger Elisabeth, Hofer Manuel, K\u00f6cher Thomas, Pichler Peter, Novatchkova Maria, Yang Jianhua, Schl\u00f6gelhofer Peter, Mechtler Karl", "evidence": [ { "database": "iPTMnet", "id": "Q9SAG7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SAG7" } ], "reference": [ { "type": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] }, { "title": "Quantitative Circadian Phosphoproteomic Analysis of Arabidopsis Reveals Extensive Clock Control of Key Components in Physiological, Metabolic, and Signaling Pathways.", "journal": "Molecular & cellular proteomics : MCP", "date": "2015-08", "authors": "Choudhary Mani Kant, Nomura Yuko, Wang Lei, Nakagami Hirofumi, Somers David E", "evidence": [ { "database": "iPTMnet", "id": "Q9SAG7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SAG7" } ], "reference": [ { "type": "PubMed", "id": "26091701", "url": "https://glygen.org/publication/PubMed/26091701" } ] }, { "title": "Integrating Phosphoproteomics and Bioinformatics to Study Brassinosteroid-Regulated Phosphorylation Dynamics in Arabidopsis.", "journal": "BMC genomics", "date": "2015-07-18", "authors": "Lin Li-Ling, Hsu Chia-Lang, Hu Chia-Wei, Ko Shiao-Yun, Hsieh Hsu-Liang, Huang Hsuan-Cheng, Juan Hsueh-Fen", "evidence": [ { "database": "iPTMnet", "id": "Q9SAG7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SAG7" } ], "reference": [ { "type": "PubMed", "id": "26187819", "url": "https://glygen.org/publication/PubMed/26187819" } ] }, { "title": "Early nitrogen-deprivation responses in Arabidopsis roots reveal distinct differences on transcriptome and (phospho-) proteome levels between nitrate and ammonium nutrition.", "journal": "The Plant journal : for cell and molecular biology", "date": "2016-12", "authors": "Menz Jochen, Li Zhi, Schulze Waltraud X, Ludewig Uwe", "evidence": [ { "database": "iPTMnet", "id": "Q9SAG7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SAG7" } ], "reference": [ { "type": "PubMed", "id": "27419465", "url": "https://glygen.org/publication/PubMed/27419465" } ] }, { "title": "Comprehensive Analysis of the Membrane Phosphoproteome Regulated by Oligogalacturonides in Arabidopsis thaliana.", "journal": "Frontiers in plant science", "date": "2016", "authors": "Mattei Benedetta, Spinelli Francesco, Pontiggia Daniela, De Lorenzo Giulia", "evidence": [ { "database": "iPTMnet", "id": "Q9SAG7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SAG7" } ], "reference": [ { "type": "PubMed", "id": "27532006", "url": "https://glygen.org/publication/PubMed/27532006" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9SAG7", "url": "https://www.uniprot.org/uniprotkb/Q9SAG7" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] }, { "title": "Quantitative Phosphoproteomic Analysis Reveals Shared and Specific Targets of Arabidopsis Mitogen-Activated Protein Kinases (MAPKs) MPK3, MPK4, and MPK6.", "journal": "Molecular & cellular proteomics : MCP", "date": "2018-01", "authors": "Rayapuram Naganand, Bigeard Jean, Alhoraibi Hanna, Bonhomme Ludovic, Hesse Anne-Marie, Vinh Jo\u00eblle, Hirt Heribert, Pflieger Delphine", "evidence": [ { "database": "iPTMnet", "id": "Q9SAG7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SAG7" } ], "reference": [ { "type": "PubMed", "id": "29167316", "url": "https://glygen.org/publication/PubMed/29167316" } ] }, { "title": "Capturing the phosphorylation and protein interaction landscape of the plant TOR kinase.", "journal": "Nature plants", "date": "2019-03", "authors": "Van Leene Jelle, Han Chao, Gadeyne Astrid, Eeckhout Dominique, Matthijs Caroline, Cannoot Bernard, De Winne Nancy, Persiau Geert, Van De Slijke Eveline, Van de Cotte Brigitte, Stes Elisabeth, Van Bel Michiel, Storme Veronique, Impens Francis, Gevaert Kris, Vandepoele Klaas, De Smet Ive, De Jaeger Geert", "evidence": [ { "database": "iPTMnet", "id": "Q9SAG7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SAG7" } ], "reference": [ { "type": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ], "pathway": [ { "id": "ath:AT1G80930", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT1G80930", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A4X1TWU8-1", "protein_name": "Pre-mRNA-splicing factor CWC22 homolog", "gene_name": "CWC22", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MKSSVAQIKHSSSHDRRENYNSYQRTSSPEDRYPEQERSPRDRDYFDHSRSDYEHSRRGRSYDGGMESRSRDREKRRERDVDRKRSRKSPSPGRRSPEPSVTQSSSTQDEPNSKKKKEELDPLLTRTGGAYIPPAKLRMMQEQITDKNSLAYQRMSWEALKKSINGLINKVNISNIGIIIQELLQENIVRGRGLLSRSVLQAQSASPIFTHVYAALVAIINSKFPQIGELILKRLILNFRKGYRRNDKPLCLTASKFVAHLINQNVAHEVLCLEMLTLLLERPTDDSVEVAIGFLKECGLKLTQVSPRGINAIFERLRNILHESEIDKRVQYMIEVMFAVRKDGFKDHPVILEGLDLVEEDDQFTHMLPLEDDYNPEDVLNVFKMDPNFMENEEKYKAIKKEILDEGDSDSNTDQDAGSSEEEEEEEEEEGEEDEEGQKVTIHDKTEINLVSFRRTIYLAIQSSLDFEECAHKLLKMEFPESQTKELCNMILDCCAQQRTYEKFFGLLAGRFCMLKKEYMESFESIFKEQYDTIHRLETNKLRNVAKMFAHLLYTDSLPWSVLECIKLSEETTTSSSRIFVKIFFQELCEYMGLPKLNARLKDETLQPFFEGLLPRDNPRNTRFAINFFTSIGLGGLTDELREHLKNTPKVIVAQKPDVEPNKSSPSSSSSGSSSSSSDSESSASDSDSSDSSSESSSEESDSSSTSSQSSSSAKDVRKKGQGNPRSKEVDKLIRRQQTNDRKQEERRPEPRHQETRTERERRSEKPRDRDSRDPATKHSSDRGVPSERNSYSRAMNDRDYEMHIDVEHKHRDPKKKRGERRNSFSENEHRHRNRDSENFTRKERSNSREKSKKHSGSRSDEDRYQNGAERRWEKSSRYSEQSRESKKNQDRRKEKSPTKQKK", "length": 903 }, "evidence": [ { "id": "Q9SAG7", "url": "https://omabrowser.org/oma/group/Q9SAG7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8C2MGD7-1", "protein_name": "Pre-mRNA-splicing factor CWC22 homolog", "gene_name": "Cwc22", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MKSSVAPMKHSSGHDRRESHNSYHRNSSPEDRYAEQERSPRDRDYSDYSRSDYERSRRGYSYDDSVESRSRDREKRRERERDVDRKRSRKSPSPGRRSPERAVTQSSTQEEPSMKKKKDEQDPLLTRTGGAYIPPAKLRMMQEQITDKNSLAYQRMSWEALKKSINGLINKVNISNISIIIQELLQENIVRGRGLLSRSVLQAQSASPIFTHVYAALVAIINSKFPQIGELILKRLILNFRKGYRRNDKQLCLTASKFVAHLINQNVAHEVLCLEMLTLLLERPTDDSVEVAIGFLKECGLKLTQVSPRGINAIFERLRNILHESEIDKRVQYMIEVMFAVRKDGFKDHPVILEGLDLVEEDDQFTHMLPLEDDYNPEDVLNVFKMDPNFMENEEKYKAIKKEILDEGDSDSNTDQEAGSSEDEEEEEEEEEGEEEEGGQKVTIHDKTEINLVSFRRTIYLAIQSSLDFEECAHKLLKMEFAESQTKELCNMILDCCAQQRTYEKFFGLLAGRFCMLKKEYMESFESIFKEQYDTIHRLETNKLRNVAKMFAHLLYTDSLPWSVLECIKLSEETTTSSSRIFVKIFFQELCEYMGLPKLNARLKDETLQPFFEGLLPRDNPRNTRFAINFFTSIGLGGLTDELREHLKNTPKVIVAQKPEGEQKKPPLTSSSSASSSESDSSESDSDSSESSSDSSSEGSDSSSSSSQSSASAKDTRKKKRGKARSEEVEKVVRGQQTRDRRREGGREEQRHQEGRTDRERSDRHRAQNSRNADCRDPLAKYMTDRSLPSQENSYSRVGNGRDQDMHRELEDKHGELKKKRRERRDSFSENEKQRTRNQDSESVRRKHRSKSRERSRKHSGHKSDDDRYQNGAERRWEKSTRYSEHSRESKRNQDRRREKSPTRQK", "length": 906 }, "evidence": [ { "id": "Q9SAG7", "url": "https://omabrowser.org/oma/group/Q9SAG7/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0A8I6GJW5-1", "protein_name": "Pre-mRNA-splicing factor CWC22 homolog", "gene_name": "Cwc22", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MKSSMAHMKQSSGHDRRESHNSYHRRSSSPEDRYTEQDRSPRDRDYSDYSRSDYERSRRGYSYDDSMESRSRDREKRRERERDADHRKRSRKSPSPERRSPDRGVSQSSTQEEPTSKKKKDEQDPLLTRTGGAYIPPAKLRMMQEQITDKNSLAYQRMSWEALKKSINGLINKVNISNISIIIQELLQENIVRGRGLLSRSVLQAQSASPIFTHVYAALVAIINSKFPQIGELILKRLILNFRKGYRRNDKQLCLTASKFVAHLINQNVAHEVLCLEMLTLLLERPTDDSVEVAIGFLKECGLKLTQVSPRGINAIFERLRNILHESEIDKRVQYMIEVMFAVRKDGFKDHPVILEGLDLVEEDDQFTHMLPLEDDYNPEDVLNVFKMDPNFMENEEKYKVIKKEILDEGDSDSNTDQEAGSSEDEEEDEEEEEGEEEEGGQKVTIHDKTEINLVSFRRTIYLAIQSSLDFEECAHKLLKMEFAESQTKELCNMILDCCAQQRTYEKFFGLLAGRFCMLKKEYMESFESIFKEQYDTIHRLETNKLRNVAKMFAHLLYTDSLPWSVLECIKLSEETTTSSSRIFVKIFFQELCEYMGLPKLNARLKDETLQPFFEGLLPRDNPRNTRFAINFFTSIGLGGLTDELREHLKNTPKVIVAQKPDAEQKKPVLTSSSSESSSGSDSSDSDSDSSESSSESSSEASDSSSSSSQSSASAKGSRKKRQGKARGEEVDKLARSHQARDRRREGGREDQRHQEGRTERARSERHRAQHSRDADWRDPPAKHMEDRSHENSYNRVGNGREQGSHREPEDRHGEPRKKRRERRDSFSENEKQRARNQDSDNVRRKDGSKSRERSRKHSGHKGDDDDRYQNGAERRWEKPSRYAEHSRESKRSQDRRREKSPTKHK", "length": 906 }, "evidence": [ { "id": "Q9SAG7", "url": "https://omabrowser.org/oma/group/Q9SAG7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8V1ACT5-1", "protein_name": "Pre-mRNA-splicing factor CWC22 homolog", "gene_name": "CWC22", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MKSRVTQINHGSSHERKERYSPRHRSLTPEDRDVERDRSRSPRRRRYSDDSRYDQEYSRREYYDDRSSEGRRMERGRDRYYEKWEERDYDRRRKRRLSSPDHRSPERSTVQGSNTHEEATSKKKKEEVDPILTRTGGAYIPPAKLRMMQEQITDKNSLAYQRMSWEALKKSINGLVNKVNVSNIENIIYELLQENIVRGRGLLSRSILQAQGASPIFTHVYAALVAIINSKFPNIGELILKRLILNFRKGYRRNDKQLCLTSSKFVAHLMNQNVAHEVLCLEMLTLLLERPTDDSIEVAIGFLKESGLKLTEVSPRGINAIFDRLRHILHESKIDMRVQYMIEVMFAVRKDGFKDHPIIPEGLDLVEEEDQFTHMLPLEDEYNPEDVLNVFKMDPNFMENEEKYKALKKEILDEGDSESEPDQEAGSSDEEEEEDEEEDEDGQKVTVHDKTEINLVSFRRTIYLAIQSSLDFEECAHKLLKMDFPESQTKELCNMILDCCAQQRTYEKFFGLLAGRFCMLKKEYMESFEAIFKEQYDTIHRLETNKLRNVAKMFAHLLYTDSIPWSVLECIILSEETTTSSSRIFVKIFFQELSEYMGLPNLNARLKDITLQPFFEGLLPRDNPRNTRFAINFFTSIGLGGLTDELREHLKNAPKMIMTQKQDVESSDSSSSSETDSSSDSDSDSSSSSSESSSSSDSSSSSSDSSDSDASKAKKRRTQKKNRESDKASRKKQEKKRKSLEKKTGRRRQEDRSDSESKSERNHRNLREAHRRDDTSKYHHRDESNGRDDYEAYRRDDVSKYHQRDESNGRDNYHSGRDRDHERSKDLENKHSNSKLKKAERRASFSDDESYRHGSRDNGHRSRKRERSKSGERSYNKSSPREEEEDHRYRNGSERLREKYNHYSDQYRESRKHEDRRRENSPHRRK", "length": 926 }, "evidence": [ { "id": "Q9SAG7", "url": "https://omabrowser.org/oma/group/Q9SAG7/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A2AK42-1", "protein_name": "Pre-mRNA-splicing factor CWC22 homolog", "gene_name": "Cwc22rt5", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKSSVAHMKQSSGHNRRETHSSYCRSSSPEDRYTEQERFPRDRDYSDYSRSDYERSRRGYSYDDSMESRSRDREKRRERERDADHRKRPWKSPSPDRSPARGIRQSSPQEEPTWKKKKDELDPLLTRTGGAYIPPAKLRMMQEQITDKSSLAYQRMSWEALKKSINGLINKVNISNISIIIQELLQENIVRGRGLLSRSVLQAQSASPIFTHVYAALVAIINSKFPQIGELILKRLILNFRKGYRRNDKQLCLTASKFVAHLINQNVAHEVLCLEMLTLLLERPTDDSVEVAIGFLKECGLKLAQVSPRGINAIFERLRNILHESEIDKRVQYMIEVMFAVRKDGFKDHPVILEGLDLVEEDDQFTHMLPLEDDYNPEDVLNVFKMDPNFMENEEKYKAIKKEILDEGDSDSNTDQGAGSSEDEEEEEEEEEEEEEEGEDEEGGQKVTIHDKTEINLVSFRRTIYLAIQSSLDFEECAHKLLKMEFAESQTKELCNMILDCCAQQRTYENFFGLLAGRFCMLEKEYMESFESIFKEQYDTIHRLETNKLRNVAKVFAHLLYTDSLPWSVLECIKLSEETTTSSSRIFVKIFFQELCEYMGLPKLNARLKDETLQPFFEGLLPRDNPRNTRFAINFFTSIGLGGLTDELREHLKNTPKVIVAQKPEAEQKKTALTSSSSESSSASDSSDSDSDSSESSSESSSEASDSSSSSSTQSSTSAKGTRKKRQGKARGEEVDKLARGHQALERRQGGREDQRHQEGRTERARSERHRAQNSRDADWRDSLAKHIDDRSHENSHSRVGNGREQGSHREPEDRHGEPKKKQREKRFFL", "length": 830 }, "evidence": [ { "id": "Q9SAG7", "url": "https://omabrowser.org/oma/group/Q9SAG7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "F1MWG3-1", "protein_name": "Pre-mRNA-splicing factor CWC22 homolog", "gene_name": "CWC22", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MKSSVAQIKHSSGHDRRENYNSYQRTSSPEDRYIEQERSPRDRGYFDSSRSDYERSRRERSYDSSMESRSRDREKRRERDVDRKRSRKSPSPGRRSPEPSVTQSSSAQDEPTAKKKKEELDPLLTRTGGAYIPPAKLRMMQEQITDKNSLAYQRMSWEALKKSINGLINKVNISNIGIIIQELLQENIVRGRGLLSRSVLQAQSASPIFTHVYAALVAIINSKFPQIGELILKRLILNFRKGYRRNDKPLCLTASKFVAHLINQNVAHEVLCLEMLTLLLERPTDDSVEVAIGFLKECGLKLTQVSPRGINAIFERLRNILHESEIDKRVQYMIEVMFAVRKDGFKDHPVILEGLDLVEEDDQFTHMLPLEDDYNPEDVLNVFKMDPNFMENEEKYRAIKKEILDEGDSDSNTDQDAGSSEEEEEEEEEEGEEDEEGQKVTIHDKTEINLVSFRRTIYLAIQSSLDFEECAHKLLKMEFPESQTKELCNMILDCCAQQRTYEKFFGLLAGRFCMLKKEYMESFESIFKEQYDTIHRLETNKLRNVAKMFAHLLYTDSLPWSVLECIKLSEETTTSSSRIFVKIFFQELCEYMGLPKLNARLKDETLQPFFEGLLPRDNPRNTRFAINFFTSIGLGGLTDELREHLKNTPKVIVAQKPDVEPDKSSSSSSSSESSSSESDSSASDSDSSDSSSESSSEESDSSSTSSQSSASAKNVRKKGHGNHRSKEVDKLIRKQEINDRKQEERRPEHRHQETRTERERRSEKPRERDSRGSGTTYTSDRGIPSARNSCSRAVHDRDQEARVDLARNHGDPEKKRERRNSFSENEHRHRNRDSENFRRRDRSKSREKNKKHSGSRSEDDRYQNGAERQWEKPSRYSEQSGESKKSQDRRREKSPTKQKK", "length": 900 }, "evidence": [ { "id": "Q9SAG7", "url": "https://omabrowser.org/oma/group/Q9SAG7/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "P53333-1", "protein_name": "Pre-mRNA-splicing factor CWC22", "gene_name": "CWC22", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MSTATIQDEDIKFQRENWEMIRSHVSPIISNLTMDNLQESHRDLFQVNILIGRNIICKNVVDFTLNKQNGRLIPALSALIALLNSDIPDIGETLAKELMLMFVQQFNRKDYVSCGNILQCLSILFLYDVIHEIVILQILLLLLEKNSLRLVIAVMKICGWKLALVSKKTHDMIWEKLRYILQTQELSSTLRESLETLFEIRQKDYKSGSQGLFILDPTSYTVHTHSYIVSDEDEANKELGNFEKCENFNELTMAFDTLRQKLLINNTSDTNEGSNSQLQIYDMTSTNDVEFKKKIYLVLKSSLSGDEAAHKLLKLKIANNLKKSVVDIIIKSSLQESTFSKFYSILSERMITFHRSWQTAYNETFEQNYTQDIEDYETDQLRILGKFWGHLISYEFLPMDCLKIIKLTEEESCPQGRIFIKFLFQELVNELGLDELQLRLNSSKLDGMFPLEGDAEHIRYSINFFTAIGLGLLTEDMRSRLTIIQEVEDAEEEEKKLREEEELEKLRKKARESQPTQGPKIHESRLFLQKDTRENSRSRSPFTVETRKRARSRTPPRGSRNHRNRSRTPPARRQRHR", "length": 577 }, "evidence": [ { "id": "Q9SAG7", "url": "https://omabrowser.org/oma/group/Q9SAG7/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "Q9HCG8-1", "protein_name": "Pre-mRNA-splicing factor CWC22 homolog", "gene_name": "CWC22", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MKSSVAQIKPSSGHDRRENLNSYQRNSSPEDRYEEQERSPRDRDYFDYSRSDYEHSRRGRSYDSSMESRNRDREKRRERERDTDRKRSRKSPSPGRRNPETSVTQSSSAQDEPATKKKKDELDPLLTRTGGAYIPPAKLRMMQEQITDKNSLAYQRMSWEALKKSINGLINKVNISNISIIIQELLQENIVRGRGLLSRSVLQAQSASPIFTHVYAALVAIINSKFPQIGELILKRLILNFRKGYRRNDKQLCLTASKFVAHLINQNVAHEVLCLEMLTLLLERPTDDSVEVAIGFLKECGLKLTQVSPRGINAIFERLRNILHESEIDKRVQYMIEVMFAVRKDGFKDHPIILEGLDLVEEDDQFTHMLPLEDDYNPEDVLNVFKMDPNFMENEEKYKAIKKEILDEGDTDSNTDQDAGSSEEDEEEEEEEGEEDEEGQKVTIHDKTEINLVSFRRTIYLAIQSSLDFEECAHKLLKMEFPESQTKELCNMILDCCAQQRTYEKFFGLLAGRFCMLKKEYMESFEGIFKEQYDTIHRLETNKLRNVAKMFAHLLYTDSLPWSVLECIKLSEETTTSSSRIFVKIFFQELCEYMGLPKLNARLKDETLQPFFEGLLPRDNPRNTRFAINFFTSIGLGGLTDELREHLKNTPKVIVAQKPDVEQNKSSPSSSSSASSSSESDSSDSDSDSSDSSSESSSEESDSSSISSHSSASANDVRKKGHGKTRSKEVDKLIRNQQTNDRKQKERRQEHGHQETRTERERRSEKHRDQNSSGSNWRDPITKYTSDKDVPSERNNYSRVANDRDQEMHIDLENKHGDPKKKRGERRNSFSENEKHTHRIKDSENFRRKDRSKSKEMNRKHSGSRSDEDRYQNGAERRWEKSSRYSEQSRESKKNQDRRREKSPAKQK", "length": 908 }, "evidence": [ { "id": "Q9SAG7", "url": "https://omabrowser.org/oma/group/Q9SAG7/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "RNA binding", "id": "GO:0003723", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003723", "evidence": [ { "database": "UniProtKB", "id": "Q9SAG7", "url": "https://www.uniprot.org/uniprotkb/Q9SAG7" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q9SAG7", "url": "https://www.uniprot.org/uniprotkb/Q9SAG7" } ], "pmid": "" }, { "name": "catalytic step 2 spliceosome", "id": "GO:0071013", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0071013", "evidence": [ { "database": "UniProtKB", "id": "Q9SAG7", "url": "https://www.uniprot.org/uniprotkb/Q9SAG7" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 2, "go_terms": [ { "name": "regulation of translation", "id": "GO:0006417", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006417", "evidence": [ { "database": "UniProtKB", "id": "Q9SAG7", "url": "https://www.uniprot.org/uniprotkb/Q9SAG7" } ], "pmid": "" }, { "name": "mRNA splicing, via spliceosome", "id": "GO:0000398", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000398", "evidence": [ { "database": "UniProtKB", "id": "Q9SAG7", "url": "https://www.uniprot.org/uniprotkb/Q9SAG7" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 254, "end_pos": 256, "annotation": "n_glycosylation_sequon" }, { "start_pos": 374, "end_pos": 376, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "Q9SAG7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SAG7" }, { "id": "PS51366", "database": "PROSITE", "url": "https://prosite.expasy.org/PS51366" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "MI", "eco_id": "ECO_0000259", "start_pos": 649, "end_pos": 765, "start_aa": "Asn", "end_aa": "Leu", "glycosite_overlap": [] } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [ 6, 7, 8, 25, 31, 45, 79, 80, 98, 100, 112, 133, 134, 135, 187, 213, 223, 235 ], "sequon_annotation_sites": [ { "start_pos": 254, "end_pos": 256 }, { "start_pos": 374, "end_pos": 376 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 18 }, { "field": "total_sites", "count": 18 } ], "sort_fields": [ "start_pos", "end_pos", "kinase_uniprot_canonical_ac", "kinase_gene_name", "residue", "comment", "site_lbl" ] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 23 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "Q9SAH1-1", "uniprot_ac": "Q9SAH1", "uniprot_id": "Q9SAH1_ARATH", "mass": { "chemical_mass": 8809.0, "monoisotopic_mass": 8809.0 }, "refseq": { "ac": "NP_178204", "name": "GAG1At protein", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_178204" }, "gene_names": [ { "name": "OEP92", "type": "recommended", "evidence": [ { "id": "Q9SAH1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SAH1" } ] }, { "name": "F23A5.25", "type": "synonym", "evidence": [ { "id": "NP_178204", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_178204" }, { "id": "Q9SAH1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SAH1" } ] }, { "name": "F23A5_25", "type": "synonym", "evidence": [ { "id": "NP_178204", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_178204" }, { "id": "Q9SAH1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SAH1" } ] } ], "protein_names": [ { "name": "GAG1At protein", "type": "synonym", "evidence": [ { "id": "NP_178204", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_178204" }, { "id": "Q9SAH1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SAH1/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9SAH1", "url": "https://www.uniprot.org/uniprotkb/Q9SAH1" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "OEP92", "url": "https://www.uniprot.org/uniprotkb/Q9SAH1", "locus": {} } ], "crossref": [ { "id": "844429", "url": "https://www.ncbi.nlm.nih.gov/gene/844429", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "Q9SAH1", "url": "https://www.ebi.ac.uk/intact/interactors/id:Q9SAH1*", "database": "IntAct", "categories": [ "Other" ] }, { "id": "ath:AT1G80890", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT1G80890", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "VKHQSHE", "url": "https://omabrowser.org/oma/group/VKHQSHE/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "Q9SAH1", "url": "https://www.orthodb.org/?gene=Q9SAH1", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR35990", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR35990", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR35990:SF1", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR35990:SF1", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "NP_178204", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_178204", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT1G80890", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT1G80890", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9SAH1", "url": "https://www.uniprot.org/uniprotkb/Q9SAH1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9SAH1-1", "url": "https://www.uniprot.org/uniprotkb/Q9SAH1-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MGNESKSNLGGGGIRAKMEHYVYSGEKKHVLAGIGIISIIFGIPWYLMNQGSKHRSHQDYLEKADKARKARLSSSSSSDK", "length": 80, "header": "tr|Q9SAH1-1|Q9SAH1_ARATH Isoform 1 of GAG1At protein OS=Arabidopsis thaliana OX=3702 GN=OEP92 PE=1 SV=1 CANONICAL=Q9SAH1-1" }, "isoforms": [ { "isoform_ac": "Q9SAH1-1", "url": "https://www.uniprot.org/uniprotkb/Q9SAH1/entry", "sequence": { "sequence": "MGNESKSNLGGGGIRAKMEHYVYSGEKKHVLAGIGIISIIFGIPWYLMNQGSKHRSHQDYLEKADKARKARLSSSSSSDK", "length": 80, "header": "tr|Q9SAH1-1|Q9SAH1_ARATH Isoform 1 of GAG1At protein OS=Arabidopsis thaliana OX=3702 GN=OEP92 PE=1 SV=1 CANONICAL=Q9SAH1-1" }, "locus": { "chromosome": "1", "start_pos": 30397128, "end_pos": 30398210, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT1G80890.1", "url": "https://www.ensemblgenomes.org/id/AT1G80890.1" }, { "database": "Ensembl Peptide", "id": "AT1G80890.1", "url": "https://www.ensemblgenomes.org/id/AT1G80890.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Theologis A, Ecker J R, Palm C J, Federspiel N A, Kaul S, White O, Alonso J, Altafi H, Araujo R, Bowman C L, Brooks S Y, Buehler E, Chan A, Chao Q, Chen H, Cheuk R F, Chin C W, Chung M K, Conn L, Conway A B, Conway A R, Creasy T H, Dewar K, Dunn P, Etgu P, Feldblyum T V, Feng J, Fong B, Fujii C Y, Gill J E, Goldsmith A D, Haas B, Hansen N F, Hughes B, Huizar L, Hunter J L, Jenkins J, Johnson-Hopson C, Khan S, Khaykin E, Kim C J, Koo H L, Kremenetskaia I, Kurtz D B, Kwan A, Lam B, Langin-Hooper S, Lee A, Lee J M, Lenz C A, Li J H, Li Y, Lin X, Liu S X, Liu Z A, Luros J S, Maiti R, Marziali A, Militscher J, Miranda M, Nguyen M, Nierman W C, Osborne B I, Pai G, Peterson J, Pham P K, Rizzo M, Rooney T, Rowley D, Sakano H, Salzberg S L, Schwartz J R, Shinn P, Southwick A M, Sun H, Tallon L J, Tambunga G, Toriumi M J, Town C D, Utterback T, Van Aken S, Vaysberg M, Vysotskaia V S, Walker M, Wu D, Yu G, Fraser C M, Venter J C, Davis R W", "evidence": [ { "database": "UniProtKB", "id": "Q9SAH1", "url": "https://www.uniprot.org/uniprotkb/Q9SAH1" } ], "reference": [ { "type": "PubMed", "id": "11130712", "url": "https://glygen.org/publication/PubMed/11130712" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9SAH1", "url": "https://www.uniprot.org/uniprotkb/Q9SAH1" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT1G80890", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT1G80890", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q9SAH1", "url": "https://www.uniprot.org/uniprotkb/Q9SAH1" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 3, "end_pos": 5, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], 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Lenz C A, Li J H, Li Y, Lin X, Liu S X, Liu Z A, Luros J S, Maiti R, Marziali A, Militscher J, Miranda M, Nguyen M, Nierman W C, Osborne B I, Pai G, Peterson J, Pham P K, Rizzo M, Rooney T, Rowley D, Sakano H, Salzberg S L, Schwartz J R, Shinn P, Southwick A M, Sun H, Tallon L J, Tambunga G, Toriumi M J, Town C D, Utterback T, Van Aken S, Vaysberg M, Vysotskaia V S, Walker M, Wu D, Yu G, Fraser C M, Venter J C, Davis R W", "evidence": [ { "database": "UniProtKB", "id": "Q9SAH6", "url": "https://www.uniprot.org/uniprotkb/Q9SAH6" } ], "reference": [ { "type": "PubMed", "id": "11130712", "url": "https://glygen.org/publication/PubMed/11130712" } ] }, { "title": "Quantitative phosphoproteomics of the ataxia telangiectasia-mutated (ATM) and ataxia telangiectasia-mutated and rad3-related (ATR) dependent DNA damage response in Arabidopsis thaliana.", "journal": "Molecular & cellular proteomics : MCP", "date": "2015-03", "authors": "Roitinger Elisabeth, Hofer Manuel, K\u00f6cher Thomas, Pichler 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Araujo R, Bowman C L, Brooks S Y, Buehler E, Chan A, Chao Q, Chen H, Cheuk R F, Chin C W, Chung M K, Conn L, Conway A B, Conway A R, Creasy T H, Dewar K, Dunn P, Etgu P, Feldblyum T V, Feng J, Fong B, Fujii C Y, Gill J E, Goldsmith A D, Haas B, Hansen N F, Hughes B, Huizar L, Hunter J L, Jenkins J, Johnson-Hopson C, Khan S, Khaykin E, Kim C J, Koo H L, Kremenetskaia I, Kurtz D B, Kwan A, Lam B, Langin-Hooper S, Lee A, Lee J M, Lenz C A, Li J H, Li Y, Lin X, Liu S X, Liu Z A, Luros J S, Maiti R, Marziali A, Militscher J, Miranda M, Nguyen M, Nierman W C, Osborne B I, Pai G, Peterson J, Pham P K, Rizzo M, Rooney T, Rowley D, Sakano H, Salzberg S L, Schwartz J R, Shinn P, Southwick A M, Sun H, Tallon L J, Tambunga G, Toriumi M J, Town C D, Utterback T, Van Aken S, Vaysberg M, Vysotskaia V S, Walker M, Wu D, Yu G, Fraser C M, Venter J C, Davis R W", "evidence": [ { "database": "UniProtKB", "id": "Q9SAU9", "url": "https://www.uniprot.org/uniprotkb/Q9SAU9" } ], "reference": [ { "type": "PubMed", "id": "11130712", "url": "https://glygen.org/publication/PubMed/11130712" } ] }, { "title": "Large-scale phosphorylation mapping reveals the extent of tyrosine phosphorylation in Arabidopsis.", "journal": "Molecular systems biology", "date": "2008", "authors": "Sugiyama Naoyuki, Nakagami Hirofumi, Mochida Keiichi, Daudi Arsalan, Tomita Masaru, Shirasu Ken, Ishihama Yasushi", "evidence": [ { "database": "iPTMnet", "id": "Q9SAU9", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SAU9" } ], "reference": [ { "type": "PubMed", "id": "18463617", "url": "https://glygen.org/publication/PubMed/18463617" } ] }, { "title": "Large-scale comparative phosphoproteomics identifies conserved phosphorylation sites in plants.", "journal": "Plant physiology", "date": "2010-07", "authors": "Nakagami Hirofumi, Sugiyama Naoyuki, Mochida Keiichi, Daudi Arsalan, Yoshida Yuko, Toyoda Tetsuro, Tomita Masaru, Ishihama Yasushi, Shirasu Ken", "evidence": [ { "database": "iPTMnet", "id": 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thaliana OX=3702 GN=APPB1 PE=1 SV=1 CANONICAL=Q9SB59-1" }, "locus": { "chromosome": "4", "start_pos": 12717788, "end_pos": 12719287, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT4G24640.1", "url": "https://www.ensemblgenomes.org/id/AT4G24640.1" }, { "database": "Ensembl Peptide", "id": "AT4G24640.1", "url": "https://www.ensemblgenomes.org/id/AT4G24640.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "1999", "authors": "Mayer K, Sch\u00fcller C, Wambutt R, Murphy G, Volckaert G, Pohl T, D\u00fcsterh\u00f6ft A, Stiekema W, Entian K D, Terryn N, Harris B, Ansorge W, Brandt P, Grivell L, Rieger M, Weichselgartner M, de Simone V, Obermaier B, Mache R, M\u00fcller M, Kreis M, Delseny M, Puigdomenech P, Watson M, Schmidtheini T, Reichert B, Portatelle D, Perez-Alonso M, Boutry M, Bancroft I, 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G, Ramsperger U, Hilbert H, Braun M, Holzer E, Brandt A, Peters S, van Staveren M, Dirske W, Mooijman P, Klein Lankhorst R, Rose M, Hauf J, K\u00f6tter P, Berneiser S, Hempel S, Feldpausch M, Lamberth S, Van den Daele H, De Keyser A, Buysshaert C, Gielen J, Villarroel R, De Clercq R, Van Montagu M, Rogers J, Cronin A, Quail M, Bray-Allen S, Clark L, Doggett J, Hall S, Kay M, Lennard N, McLay K, Mayes R, Pettett A, Rajandream M A, Lyne M, Benes V, Rechmann S, Borkova D, Bl\u00f6cker H, Scharfe M, Grimm M, L\u00f6hnert T H, Dose S, de Haan M, Maarse A, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Fartmann B, Granderath K, Dauner D, Herzl A, Neumann S, Argiriou A, Vitale D, Liguori R, Piravandi E, Massenet O, Quigley F, Clabauld G, M\u00fcndlein A, Felber R, Schnabl S, Hiller R, Schmidt W, Lecharny A, Aubourg S, Chefdor F, Cooke R, Berger C, Montfort A, Casacuberta E, Gibbons T, Weber N, Vandenbol M, Bargues M, Terol J, Torres A, Perez-Perez A, Purnelle B, Bent E, Johnson S, 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"id": "Q9SB65", "url": "https://www.uniprot.org/uniprotkb/Q9SB65" } ], "reference": [ { "type": "PubMed", "id": "10617198", "url": "https://glygen.org/publication/PubMed/10617198" } ] }, { "title": "Targeted quantitative phosphoproteomics approach for the detection of phospho-tyrosine signaling in plants.", "journal": "Journal of proteome research", "date": "2012-01-01", "authors": "Mithoe Sharon C, Boersema Paul J, Berke Lidija, Snel Berend, Heck Albert J R, Menke Frank L H", "evidence": [ { "database": "iPTMnet", "id": "Q9SB65", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SB65" } ], "reference": [ { "type": "PubMed", "id": "22074104", "url": "https://glygen.org/publication/PubMed/22074104" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": 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Hempel S, Feldpausch M, Lamberth S, Van den Daele H, De Keyser A, Buysshaert C, Gielen J, Villarroel R, De Clercq R, Van Montagu M, Rogers J, Cronin A, Quail M, Bray-Allen S, Clark L, Doggett J, Hall S, Kay M, Lennard N, McLay K, Mayes R, Pettett A, Rajandream M A, Lyne M, Benes V, Rechmann S, Borkova D, Bl\u00f6cker H, Scharfe M, Grimm M, L\u00f6hnert T H, Dose S, de Haan M, Maarse A, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Fartmann B, Granderath K, Dauner D, Herzl A, Neumann S, Argiriou A, Vitale D, Liguori R, Piravandi E, Massenet O, Quigley F, Clabauld G, M\u00fcndlein A, Felber R, Schnabl S, Hiller R, Schmidt W, Lecharny A, Aubourg S, Chefdor F, Cooke R, Berger C, Montfort A, Casacuberta E, Gibbons T, Weber N, Vandenbol M, Bargues M, Terol J, Torres A, Perez-Perez A, Purnelle B, Bent E, Johnson S, Tacon D, Jesse T, Heijnen L, Schwarz S, Scholler P, Heber S, Francs P, Bielke C, Frishman D, Haase D, Lemcke K, Mewes H W, Stocker S, Zaccaria P, Bevan M, Wilson R K, de la Bastide M, Habermann K, Parnell L, Dedhia N, Gnoj L, Schutz K, Huang E, Spiegel L, Sehkon M, Murray J, Sheet P, Cordes M, Abu-Threideh J, Stoneking T, Kalicki J, Graves T, Harmon G, Edwards J, Latreille P, Courtney L, Cloud J, Abbott A, Scott K, Johnson D, Minx P, Bentley D, Fulton B, Miller N, Greco T, Kemp K, Kramer J, Fulton L, Mardis E, Dante M, Pepin K, Hillier L, Nelson J, Spieth J, Ryan E, Andrews S, Geisel C, Layman D, Du H, Ali J, Berghoff A, Jones K, Drone K, Cotton M, Joshu C, Antonoiu B, Zidanic M, Strong C, Sun H, Lamar B, Yordan C, Ma P, Zhong J, Preston R, Vil D, Shekher M, Matero A, Shah R, Swaby I K, O'Shaughnessy A, Rodriguez M, Hoffmann J, Till S, Granat S, Shohdy N, Hasegawa A, Hameed A, Lodhi M, Johnson A, Chen E, Marra M, Martienssen R, McCombie W R", "evidence": [ { "database": "UniProtKB", "id": "Q9SB70", "url": "https://www.uniprot.org/uniprotkb/Q9SB70" } ], "reference": [ { "type": "PubMed", "id": "10617198", "url": 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"MTDGFRYNGFSGIAYPFWLSSPPPPTPPHHPASAPPFQQSNPVESYDPAKEVFDPMMLYHDSYQRSPANWSNNPSYRENSRSQTPSSSFYADNTQHGNSGLRGEDSSYKDMLSPSGFYSSRESSSDFVSLPPTENFSERQRLNFEPTYSSATLAPVSSYADMLIRNSQDSFFTPIASSGVYSSSNAVDEKRPGYYFLGSDRSETMNVVSASRVEPYMCDTDCNPSFPMPNFITQALFDGSQTGLRVGDGRSFPSNSDVCSHAPQNFLGAQSSLQSSSVEPVNFDVLLGYGEATGHIKPLPENPNLPYPVVGSQGSRSPRSSYPLPSIINSSVSLIKDEVEGSGVSSLYQRPYTLVADSENGVSESSLKNATEDLNCHEPRSWSHFMVTSEGPSAPTMFSMGSESGGPSAPTMKADNENAQSAGNYKPPFEGSTTQPSEDVPTNQESCNLQKQTFDIMDRDKKIRSLTDVGLDLSSRSNADDVSTGRSPERHFCDQGDFPSPTSYPRVSSVVNAMHNLSEVLVYECFNNGSWLKLEQLENLDKVVDNLTKCLKKITDNKTTAGEATLPTQSMHVTCPNVVDLHEAATGVAKDFQRFSVKPLDSFGVKEPVDKNEMTQSIKNILASNFPDGEENHPQTLLYKNLWLETEAALCSTTCMARYHRIKNEIGNLKLNNKEISADAVSFMQEPSLNTQKSVPIMNANADKDTPESIIKHGSNCGKNAATMSHDASESSRINSDPVDAVLSVMSRSFTGGLEQTIRGNLRPDDATFAKIPDAIWQETSASTTENKHREVIDRFQILKEQETERKLKSQKLPDSDIDVIDRFQILKQQETNRKLKAQKCPETKKGDQEDKLEGSVMANMGRSSDVSDVMDRFQILKRREAEQVKKSLNSMDVDSDSENDQPQKRDHLWSDSLFPIRGHSQRETCAADTEQSASGKGYESPTSDWEHVIKDD", "length": 953, "header": "tr|Q9SCK9-1|Q9SCK9_ARATH Isoform 1 of Uncharacterized protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SCK9-1" }, "isoforms": [ { "isoform_ac": "Q9SCK9-1", "url": "https://www.uniprot.org/uniprotkb/Q9SCK9/entry", "sequence": { "sequence": "MTDGFRYNGFSGIAYPFWLSSPPPPTPPHHPASAPPFQQSNPVESYDPAKEVFDPMMLYHDSYQRSPANWSNNPSYRENSRSQTPSSSFYADNTQHGNSGLRGEDSSYKDMLSPSGFYSSRESSSDFVSLPPTENFSERQRLNFEPTYSSATLAPVSSYADMLIRNSQDSFFTPIASSGVYSSSNAVDEKRPGYYFLGSDRSETMNVVSASRVEPYMCDTDCNPSFPMPNFITQALFDGSQTGLRVGDGRSFPSNSDVCSHAPQNFLGAQSSLQSSSVEPVNFDVLLGYGEATGHIKPLPENPNLPYPVVGSQGSRSPRSSYPLPSIINSSVSLIKDEVEGSGVSSLYQRPYTLVADSENGVSESSLKNATEDLNCHEPRSWSHFMVTSEGPSAPTMFSMGSESGGPSAPTMKADNENAQSAGNYKPPFEGSTTQPSEDVPTNQESCNLQKQTFDIMDRDKKIRSLTDVGLDLSSRSNADDVSTGRSPERHFCDQGDFPSPTSYPRVSSVVNAMHNLSEVLVYECFNNGSWLKLEQLENLDKVVDNLTKCLKKITDNKTTAGEATLPTQSMHVTCPNVVDLHEAATGVAKDFQRFSVKPLDSFGVKEPVDKNEMTQSIKNILASNFPDGEENHPQTLLYKNLWLETEAALCSTTCMARYHRIKNEIGNLKLNNKEISADAVSFMQEPSLNTQKSVPIMNANADKDTPESIIKHGSNCGKNAATMSHDASESSRINSDPVDAVLSVMSRSFTGGLEQTIRGNLRPDDATFAKIPDAIWQETSASTTENKHREVIDRFQILKEQETERKLKSQKLPDSDIDVIDRFQILKQQETNRKLKAQKCPETKKGDQEDKLEGSVMANMGRSSDVSDVMDRFQILKRREAEQVKKSLNSMDVDSDSENDQPQKRDHLWSDSLFPIRGHSQRETCAADTEQSASGKGYESPTSDWEHVIKDD", "length": 953, "header": "tr|Q9SCK9-1|Q9SCK9_ARATH Isoform 1 of Uncharacterized protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SCK9-1" }, "locus": { "chromosome": "3", "start_pos": 18344738, "end_pos": 18348730, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G49490.1", "url": "https://www.ensemblgenomes.org/id/AT3G49490.1" }, { "database": "Ensembl Peptide", "id": "AT3G49490.1", "url": "https://www.ensemblgenomes.org/id/AT3G49490.1" } ] } } ], "glycosylation": [ { "glytoucan_ac": "G49108TO", "type": "O-linked", "subtype": "O-GlcNAcylation", "prediction_tool_list": [], "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "S", "relation": "attached", "comment": "O-GlcNAcylation", "icn3d_view": {}, "start_pos": 177, "start_aa": "Ser", "end_pos": 177, "end_aa": "Ser", "residue": "Ser", "site_lbl": "Ser177", "evidence": [ { "id": "28154133", "database": "PubMed", "url": "https://glygen.org/publication/PubMed/28154133" }, { "id": "Q9SCK9", "database": "O-GlcNAc Atlas", "url": "https://oglcnac.org/atlas/detail/Q9SCK9" } ], "filter_code": "000000000000000100000.xxxxxxx.00000001000000.xxxxxxx.xxxxxxxxxx.xxxxxxxxxxxxxxxxxx.xxxxx.01000" }, { "glytoucan_ac": "G49108TO", "type": "O-linked", "subtype": "O-GlcNAcylation", "prediction_tool_list": [], "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "S", "relation": "attached", "comment": "O-GlcNAcylation", "icn3d_view": {}, "start_pos": 178, "start_aa": "Ser", "end_pos": 178, "end_aa": "Ser", "residue": "Ser", "site_lbl": "Ser178", "evidence": [ { "id": "28154133", "database": "PubMed", "url": "https://glygen.org/publication/PubMed/28154133" }, { "id": "Q9SCK9", "database": "O-GlcNAc Atlas", "url": "https://oglcnac.org/atlas/detail/Q9SCK9" } ], "filter_code": "000000000000000100000.xxxxxxx.00000001000000.xxxxxxx.xxxxxxxxxx.xxxxxxxxxxxxxxxxxx.xxxxx.01000" }, { "glytoucan_ac": "G49108TO", "type": "O-linked", "subtype": "O-GlcNAcylation", "prediction_tool_list": [], "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "S", "relation": "attached", "comment": "O-GlcNAcylation", "icn3d_view": {}, "start_pos": 182, "start_aa": "Ser", "end_pos": 182, "end_aa": "Ser", "residue": "Ser", "site_lbl": "Ser182", "evidence": [ { "id": "28154133", "database": "PubMed", "url": "https://glygen.org/publication/PubMed/28154133" }, { "id": "Q9SCK9", "database": "O-GlcNAc Atlas", "url": "https://oglcnac.org/atlas/detail/Q9SCK9" } ], "filter_code": "000000000000000100000.xxxxxxx.00000001000000.xxxxxxx.xxxxxxxxxx.xxxxxxxxxxxxxxxxxx.xxxxx.01000" }, { "glytoucan_ac": "G49108TO", "type": "O-linked", "subtype": "O-GlcNAcylation", "prediction_tool_list": [], "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "S", "relation": "attached", "comment": "O-GlcNAcylation", "icn3d_view": {}, "start_pos": 183, "start_aa": "Ser", "end_pos": 183, "end_aa": "Ser", "residue": "Ser", "site_lbl": "Ser183", "evidence": [ { "id": "28154133", "database": "PubMed", "url": "https://glygen.org/publication/PubMed/28154133" }, { "id": "Q9SCK9", "database": "O-GlcNAc Atlas", "url": "https://oglcnac.org/atlas/detail/Q9SCK9" } ], "filter_code": "000000000000000100000.xxxxxxx.00000001000000.xxxxxxx.xxxxxxxxxx.xxxxxxxxxxxxxxxxxx.xxxxx.01000" }, { "glytoucan_ac": "G49108TO", "type": "O-linked", "subtype": "O-GlcNAcylation", "prediction_tool_list": [], "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "S", "relation": "attached", "comment": "O-GlcNAcylation", "icn3d_view": {}, "start_pos": 184, "start_aa": "Ser", "end_pos": 184, "end_aa": "Ser", "residue": "Ser", "site_lbl": "Ser184", "evidence": [ { "id": "28154133", "database": "PubMed", "url": "https://glygen.org/publication/PubMed/28154133" }, { "id": "Q9SCK9", "database": "O-GlcNAc Atlas", "url": "https://oglcnac.org/atlas/detail/Q9SCK9" } ], "filter_code": "000000000000000100000.xxxxxxx.00000001000000.xxxxxxx.xxxxxxxxxx.xxxxxxxxxxxxxxxxxx.xxxxx.01000" }, { "glytoucan_ac": "", "type": "O-linked", "subtype": "other", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 26, "start_aa": "Thr", "end_pos": 26, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr26", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ], "filter_code": "000000000000000010000.00000000001000.0.01000" }, { "glytoucan_ac": "G49108TO", "type": "O-linked", "subtype": "O-GlcNAcylation", 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484, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr484", "evidence": [ { "id": "28154133", "database": "PubMed", "url": "https://glygen.org/publication/PubMed/28154133" }, { "id": "Q9SCK9", "database": "O-GlcNAc Atlas", "url": "https://oglcnac.org/atlas/detail/Q9SCK9" } ], "filter_code": "000000000000000010000.xxxxxxx.00000001000000.xxxxxxx.xxxxxxxxxx.xxxxxxxxxxxxxxxxxx.xxxxx.01010" }, { "glytoucan_ac": "G49108TO", "type": "O-linked", "subtype": "O-GlcNAcylation", "prediction_tool_list": [], "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "S", "relation": "attached", "comment": "O-GlcNAcylation", "icn3d_view": {}, "start_pos": 487, "start_aa": "Ser", "end_pos": 487, "end_aa": "Ser", "residue": "Ser", "site_lbl": "Ser487", "evidence": [ { "id": "28154133", "database": "PubMed", "url": "https://glygen.org/publication/PubMed/28154133" }, { "id": "Q9SCK9", "database": "O-GlcNAc Atlas", "url": 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"MMKKRKRKVSKENVALTISSSVGEYGENSGTLPTDLMVEILSRVPAKSAARFRCVSNDWNSLLRSPYLTNLFLKRSSARPHLLITFQAEGKWSFFSSPEYLISDQNSNLVVVDNHMDVPKDYSFGVCVPVCGLMCTSNEWVLSRKRDARMMICNPSTGQFKSLPKVRSCRGNVITYIGYNPIEKQYKVLCMTIREKPFKFKAEEHQVLTLGTGKLKWRMLECSVDHYPYYHGSICINGVLFYLAMKSESKEYMTVSFHMKDENFMFIPNQDLLSTLINYKGRLGGIRHKSFGFMDGGDVGFELWILDVVNQEWIRSIHVLPPMWKDVVGETRVYFVGIIGSCEVVFSPFVKSNPFYIFHLDMKSNSITRVEIKGTGPLEGQAVYTFVNHIENVNLIM", "length": 397, "header": "sp|Q9SCL2-1|FB197_ARATH Isoform 1 of F-box protein At3g49450 OS=Arabidopsis thaliana OX=3702 GN= PE=2 SV=1 CANONICAL=Q9SCL2-1" }, "isoforms": [ { "isoform_ac": "Q9SCL2-1", "url": "https://www.uniprot.org/uniprotkb/Q9SCL2/entry#Q9SCL2-1", "sequence": { "sequence": 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P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9SCL2", "url": "https://www.uniprot.org/uniprotkb/Q9SCL2" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9SCL2", "url": "https://www.uniprot.org/uniprotkb/Q9SCL2" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G49450", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G49450", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": {}, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-Q9SCL2-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 397, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-Q9SCL2-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/Q9SCL2" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "Q9SCL2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SCL2" }, { "id": "PRU00080", "database": "PROSITE", "url": "https://prosite.expasy.org/PRU00080" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "F-box", "eco_id": "ECO_0000255", "start_pos": 26, "end_pos": 75, "start_aa": "Gly", "end_aa": "Arg", "glycosite_overlap": [] } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { 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"count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "Q9SCM7-1", "uniprot_ac": "Q9SCM7", "uniprot_id": "Q9SCM7_ARATH", "mass": { "chemical_mass": 9963.0, "monoisotopic_mass": 9963.0 }, "refseq": { "ac": "NP_001319780", "name": "uncharacterized protein", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001319780" }, "gene_names": [], "protein_names": [ { "name": 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Annotation" ] }, { "id": "ath:AT3G57450", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G57450", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "HKAPNGY", "url": "https://omabrowser.org/oma/group/HKAPNGY/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "Q9SCM7", "url": "https://www.orthodb.org/?gene=Q9SCM7", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR33983", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR33983", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR33983:SF1", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR33983:SF1", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "NP_001319780", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001319780", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G57450", "url": 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"https://www.uniprot.org/uniprotkb/Q9SCQ4/entry", "sequence": { "sequence": "MAISPTMMLNANYPFFMSAFGSDDNNDESDNQFDFNISRELLLNPKDIMRGEMIGEGGNSIVYKGRLKNIVPVAVKIVQPGKTSAVSIQDKQQFQKEVLVLSSMKHENIVRFVGACIEPQLMIVTELVRGGTLQRFMLNSRPSPLDLKVSLSFALDISRAMEYLHSKGIIHRDLNPRNVLVTGDMKHVKLADFGLAREKTLGGMTCEAGTYRWMAPEVCSREPLRIGEKKHYDQKIDVYSFALIFWSLLTNKTPFSEIPSISIPYFVNQGKRPSLSNIPDEVVPILECCWAADSKTRLEFKDITISLESLLKRFCSERSNNEITITEDEAYDDEIEELETTWLLPKRYIKLKKPKKIKQNVMKKILPFFKKFISSKW", "length": 377, "header": "tr|Q9SCQ4-1|Q9SCQ4_ARATH Isoform 1 of Protein kinase superfamily protein OS=Arabidopsis thaliana OX=3702 GN=PEG7 PE=4 SV=1 CANONICAL=Q9SCQ4-1" }, "locus": { "chromosome": "3", "start_pos": 18847519, "end_pos": 18849430, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G50720.1", "url": "https://www.ensemblgenomes.org/id/AT3G50720.1" }, { "database": "Ensembl Peptide", "id": "AT3G50720.1", "url": "https://www.ensemblgenomes.org/id/AT3G50720.1" } ] } } ], "glycosylation": [], 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"https://www.ensemblgenomes.org/id/AT3G50710.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, 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"PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9SCQ5", "url": "https://www.uniprot.org/uniprotkb/Q9SCQ5" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G50710", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G50710", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q9SCQ5", "url": 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"total", "count": 2 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "Q9SCR1-1", "uniprot_ac": "Q9SCR1", "uniprot_id": "Q9SCR1_ARATH", "mass": { "chemical_mass": 18604.0, "monoisotopic_mass": 18604.0 }, "refseq": { "ac": "NP_190633", "name": "uncharacterized protein", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_190633" }, "gene_names": [], "protein_names": [ { "name": "Uncharacterized protein", "type": "synonym", "evidence": [ { "id": "Q9SCR1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SCR1/entry#names_and_taxonomy" } ] }, { "name": "uncharacterized protein", "type": "synonym", "evidence": [ { "id": "NP_190633", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_190633" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9SCR1", "url": "https://www.uniprot.org/uniprotkb/Q9SCR1" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9SCR1", "locus": {} } ], "crossref": [ { "id": "824227", "url": "https://www.ncbi.nlm.nih.gov/gene/824227", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "ath:AT3G50640", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G50640", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "MARLEMH", "url": "https://omabrowser.org/oma/group/MARLEMH/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "Q9SCR1", "url": "https://www.orthodb.org/?gene=Q9SCR1", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR31722", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31722", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR31722:SF50", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31722:SF50", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "NP_190633", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_190633", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G50640", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G50640", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9SCR1", "url": "https://www.uniprot.org/uniprotkb/Q9SCR1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9SCR1-1", "url": "https://www.uniprot.org/uniprotkb/Q9SCR1-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": 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"database": "Ensembl Peptide", "id": "AT3G50640.1", "url": "https://www.ensemblgenomes.org/id/AT3G50640.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, 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Classification" ] }, { "id": "Q9SCT5", "url": "https://www.orthodb.org/?gene=Q9SCT5", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR11480", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR11480", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR11480:SF3", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR11480:SF3", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF03489", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF03489", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF05184", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF05184", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_190741", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_190741", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G51730", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G51730", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9SCT5", "url": "https://www.uniprot.org/uniprotkb/Q9SCT5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9SCT5-1", "url": "https://www.uniprot.org/uniprotkb/Q9SCT5-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MGLKAGTFVLLLLGLILVSDARSFVDSTISEKVSNKEDVCTLCEEYVTDALSYLEKNVTQAEIIEDLHDRCSQLRGYSQQCISLVDYYVPLFFLQLESFQPHYFCKRMNLCGKVVALVEEARQDSCGVCHRTVSEILIKLQDPDTQLDIVELLIKGCKSLKNYEKKCKTLVFEYGPLILVNAEEFLVKNDVCTLLRACPPEKSVLRQPELADS", "length": 213, "header": "tr|Q9SCT5-1|Q9SCT5_ARATH Isoform 1 of Pulmonary surfactant-associated protein B OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SCT5-1" }, "isoforms": [ { "isoform_ac": "Q9SCT5-1", "url": "https://www.uniprot.org/uniprotkb/Q9SCT5/entry", "sequence": { "sequence": "MGLKAGTFVLLLLGLILVSDARSFVDSTISEKVSNKEDVCTLCEEYVTDALSYLEKNVTQAEIIEDLHDRCSQLRGYSQQCISLVDYYVPLFFLQLESFQPHYFCKRMNLCGKVVALVEEARQDSCGVCHRTVSEILIKLQDPDTQLDIVELLIKGCKSLKNYEKKCKTLVFEYGPLILVNAEEFLVKNDVCTLLRACPPEKSVLRQPELADS", "length": 213, "header": "tr|Q9SCT5-1|Q9SCT5_ARATH Isoform 1 of Pulmonary surfactant-associated protein B OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SCT5-1" }, "locus": { "chromosome": "3", "start_pos": 19186666, "end_pos": 19188733, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G51730.1", "url": "https://www.ensemblgenomes.org/id/AT3G51730.1" }, { "database": "Ensembl Peptide", "id": "AT3G51730.1", "url": "https://www.ensemblgenomes.org/id/AT3G51730.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9SCT5", "url": "https://www.uniprot.org/uniprotkb/Q9SCT5" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9SCT5", "url": "https://www.uniprot.org/uniprotkb/Q9SCT5" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G51730", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G51730", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "Q54SX7-1", "protein_name": "Saposin B-type domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKFLFKLAIIALASVSVVRANEECFVCTELVNFAEDFVEKNSSIVYVEGELEKVCKFAPSEYQATCDSLVTAYGAELVQLLINKEPASTVCNQIDLCTSSSAEELTGGVECTICDFALKEVEGFLQNSETETEILTQVDKACDLFGGLKSTCVSLANSYIPQLISALENNQNPDTICAEIKACPSSSSERMIKKNF", "length": 196 }, "evidence": [ { "id": "Q9SCT5", "url": "https://omabrowser.org/oma/group/Q9SCT5/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 3, "go_terms": [ { "name": "extracellular space", "id": "GO:0005615", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005615", "evidence": [ { "database": "UniProtKB", "id": "Q9SCT5", "url": "https://www.uniprot.org/uniprotkb/Q9SCT5" } ], "pmid": "" }, { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "Q9SCT5", "url": "https://www.uniprot.org/uniprotkb/Q9SCT5" } ], "pmid": "" }, { "name": "plant-type vacuole", "id": "GO:0000325", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000325", "evidence": [ { "database": "UniProtKB", "id": "Q9SCT5", "url": "https://www.uniprot.org/uniprotkb/Q9SCT5" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 2, "go_terms": [ { "name": "proteolysis", "id": "GO:0006508", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006508", "evidence": [ { "database": 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"database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SCT5" }, { "id": "PS50015", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50015" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Saposin B-type", "eco_id": "ECO_0000259", "start_pos": 36, "end_pos": 115, "start_aa": "Lys", "end_aa": "Val", "glycosite_overlap": [] } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 57, "end_pos": 59 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": 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"Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_190739", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_190739", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G51710", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G51710", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9SCT7", "url": "https://www.uniprot.org/uniprotkb/Q9SCT7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9SCT7-1", "url": "https://www.uniprot.org/uniprotkb/Q9SCT7-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MMMKFYTFTFLICLFSKLQGHCKSDISLGNSLTLTSPLEYTPGFMGKAYIIETESSSTREPGFKAALTMESSDKDDGRYLCSLQIFLGDVRVWSSGHYSKMYVSSKCIIELTKDGDLRLKSSYKHVGWRSGTSGQGVERLEIQSTGNLVLVDAKNLIKWQSFNFPTDVMLSGQRLDVATQLTSFPNDSTLFYSFEVLRDKIALFLNLNKLKYSYWEYKPREKNTTVNFVRLGLKGLDLFDDNSRIIGRIEQPLIRFLALGNRTGNLGLYSYKPEKGKFEATFQAVSDTCDLPVACKPYGICTFSKSCSCIKVVSNGYCSSINGEEAVSVKRLCDHEMVELNGVTTVLRNGTQVRNISKERCEELCKKDCECGAASYSVSEESCVMYGIVMGVKQIERVSGLSYMVKIPKGVRLSDEKSNVRKWVVGLVGGIDGFVILLLISGFAFYFIRKRRKSLLLPPPPPPPPPLSQQPANTDS", "length": 476, "header": "tr|Q9SCT7-1|Q9SCT7_ARATH Isoform 1 of D-mannose binding lectin protein with Apple-like carbohydrate-binding domain-containing protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SCT7-1" }, "isoforms": [ { "isoform_ac": "Q9SCT7-1", "url": "https://www.uniprot.org/uniprotkb/Q9SCT7/entry", "sequence": { "sequence": "MMMKFYTFTFLICLFSKLQGHCKSDISLGNSLTLTSPLEYTPGFMGKAYIIETESSSTREPGFKAALTMESSDKDDGRYLCSLQIFLGDVRVWSSGHYSKMYVSSKCIIELTKDGDLRLKSSYKHVGWRSGTSGQGVERLEIQSTGNLVLVDAKNLIKWQSFNFPTDVMLSGQRLDVATQLTSFPNDSTLFYSFEVLRDKIALFLNLNKLKYSYWEYKPREKNTTVNFVRLGLKGLDLFDDNSRIIGRIEQPLIRFLALGNRTGNLGLYSYKPEKGKFEATFQAVSDTCDLPVACKPYGICTFSKSCSCIKVVSNGYCSSINGEEAVSVKRLCDHEMVELNGVTTVLRNGTQVRNISKERCEELCKKDCECGAASYSVSEESCVMYGIVMGVKQIERVSGLSYMVKIPKGVRLSDEKSNVRKWVVGLVGGIDGFVILLLISGFAFYFIRKRRKSLLLPPPPPPPPPLSQQPANTDS", "length": 476, "header": "tr|Q9SCT7-1|Q9SCT7_ARATH Isoform 1 of D-mannose binding lectin protein with Apple-like carbohydrate-binding domain-containing protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SCT7-1" }, "locus": { "chromosome": "3", "start_pos": 19182289, "end_pos": 19184152, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G51710.1", "url": "https://www.ensemblgenomes.org/id/AT3G51710.1" }, { "database": "Ensembl Peptide", "id": "AT3G51710.1", "url": "https://www.ensemblgenomes.org/id/AT3G51710.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9SCT7", "url": "https://www.uniprot.org/uniprotkb/Q9SCT7" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9SCT7", "url": "https://www.uniprot.org/uniprotkb/Q9SCT7" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G51710", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G51710", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "carbohydrate binding", "id": "GO:0030246", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030246", "evidence": [ { "database": "UniProtKB", "id": "Q9SCT7", "url": "https://www.uniprot.org/uniprotkb/Q9SCT7" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 186, "end_pos": 188, "annotation": "n_glycosylation_sequon" }, { "start_pos": 223, "end_pos": 225, "annotation": "n_glycosylation_sequon" }, { "start_pos": 261, "end_pos": 263, "annotation": "n_glycosylation_sequon" }, { "start_pos": 349, "end_pos": 351, "annotation": "n_glycosylation_sequon" }, { "start_pos": 355, "end_pos": 357, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "Q9SCT7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SCT7" }, { "id": "PS50948", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50948" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Apple", "eco_id": "ECO_0000259", "start_pos": 333, "end_pos": 408, "start_aa": "Cys", "end_aa": "Pro", "glycosite_overlap": [] }, { "evidence": [ { "id": "Q9SCT7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SCT7" }, { "id": "PS50927", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50927" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Bulb-type lectin", "eco_id": "ECO_0000259", "start_pos": 47, "end_pos": 163, "start_aa": "Lys", "end_aa": "Asn", "glycosite_overlap": [] } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 186, "end_pos": 188 }, { "start_pos": 223, "end_pos": 225 }, { "start_pos": 261, "end_pos": 263 }, { "start_pos": 349, "end_pos": 351 }, { "start_pos": 355, "end_pos": 357 } ] }, "class_list": [], 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"total", "count": 2 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "Q9SCT8-1", "uniprot_ac": "Q9SCT8", "uniprot_id": "Q9SCT8_ARATH", "mass": { "chemical_mass": 39253.0, "monoisotopic_mass": 39253.0 }, "refseq": { "ac": "NP_190738", "name": "PIF1 helicase", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_190738" }, "gene_names": [], "protein_names": [ { "name": "PIF1 helicase", "type": "synonym", "evidence": [ { "id": "NP_190738", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_190738" }, { "id": "Q9SCT8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SCT8/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9SCT8", "url": "https://www.uniprot.org/uniprotkb/Q9SCT8" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9SCT8", "locus": {} } ], "crossref": [ { "id": "AT3G51700", "url": "https://bar.utoronto.ca/thalemine/portal.do?externalids=AT3G51700", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "824333", "url": "https://www.ncbi.nlm.nih.gov/gene/824333", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR003871", "url": "https://www.ebi.ac.uk/interpro/entry/IPR003871", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR027417", "url": "https://www.ebi.ac.uk/interpro/entry/IPR027417", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR049163", "url": "https://www.ebi.ac.uk/interpro/entry/IPR049163", "database": "InterPro", "categories": [ "Protein 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"https://www.ncbi.nlm.nih.gov/protein/NP_190738", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G51700", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G51700", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9SCT8", "url": "https://www.uniprot.org/uniprotkb/Q9SCT8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9SCT8-1", "url": "https://www.uniprot.org/uniprotkb/Q9SCT8-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MALIDIHSSPASLDEIKPWKINMHIVRTWKGNDKESGNSIDMVLLDSSGTKIHTTIDEAFTKWITNIGGENINKPNDGETKIDIHEDLLITECKDPIKTIVDEVYGESFTESYNPDFYQERAILCHTNDVADEINDYMLSQLQGEETKCYGADTIYPTHASPNDKMLYPLEFLNSIKIPGFPDFKLRLKVGAPVMLLRDLAPYGWLRKGTRLQITRVETFVLEAMIITGNNHGEKVLIPRIPSDLREAKFPIKMRRRQFPVKLAFAMTIDESQRQTLSKVGIYLPRQLLFHGQRYVAISKVKSRAGLKVLITDKDGKPDQEETKNVVFKELFTEHLSEPLVNMC", "length": 344, "header": "tr|Q9SCT8-1|Q9SCT8_ARATH Isoform 1 of PIF1 helicase OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9SCT8-1" }, "isoforms": [ { "isoform_ac": "Q9SCT8-1", "url": "https://www.uniprot.org/uniprotkb/Q9SCT8/entry", "sequence": { "sequence": "MALIDIHSSPASLDEIKPWKINMHIVRTWKGNDKESGNSIDMVLLDSSGTKIHTTIDEAFTKWITNIGGENINKPNDGETKIDIHEDLLITECKDPIKTIVDEVYGESFTESYNPDFYQERAILCHTNDVADEINDYMLSQLQGEETKCYGADTIYPTHASPNDKMLYPLEFLNSIKIPGFPDFKLRLKVGAPVMLLRDLAPYGWLRKGTRLQITRVETFVLEAMIITGNNHGEKVLIPRIPSDLREAKFPIKMRRRQFPVKLAFAMTIDESQRQTLSKVGIYLPRQLLFHGQRYVAISKVKSRAGLKVLITDKDGKPDQEETKNVVFKELFTEHLSEPLVNMC", "length": 344, "header": "tr|Q9SCT8-1|Q9SCT8_ARATH Isoform 1 of PIF1 helicase OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9SCT8-1" }, "locus": { "chromosome": "3", "start_pos": 19179266, "end_pos": 19181189, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G51700.1", "url": "https://www.ensemblgenomes.org/id/AT3G51700.1" }, { "database": "Ensembl Peptide", "id": "AT3G51700.1", "url": "https://www.ensemblgenomes.org/id/AT3G51700.1" } ] } } ], "glycosylation": [], "phosphorylation": [ { "start_pos": 47, "end_pos": 47, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SCT8", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SCT8" } ], "site_lbl": "Ser47" } ], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9SCT8", "url": "https://www.uniprot.org/uniprotkb/Q9SCT8" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9SCT8", "url": "https://www.uniprot.org/uniprotkb/Q9SCT8" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G51700", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G51700", "resource": "KEGG Pathway" 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"https://www.ebi.ac.uk/interpro/entry/pfam/PF01582", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF07725", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF07725", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF23282", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF23282", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF23286", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF23286", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_190724", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_190724", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G51560", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G51560", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9SCZ3", "url": "https://www.uniprot.org/uniprotkb/Q9SCZ3", "database": "UniProtKB", 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"length": 1253, "header": "tr|Q9SCZ3-1|Q9SCZ3_ARATH Isoform 1 of Disease resistance protein (TIR-NBS-LRR class) family OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9SCZ3-1" }, "locus": { "chromosome": "3", "start_pos": 19121687, "end_pos": 19125913, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G51560.1", "url": "https://www.ensemblgenomes.org/id/AT3G51560.1" }, { "database": "Ensembl Peptide", "id": "AT3G51560.1", "url": "https://www.ensemblgenomes.org/id/AT3G51560.1" } ] } } ], "glycosylation": [], "phosphorylation": [ { "start_pos": 246, "end_pos": 246, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SCZ3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SCZ3" } ], "site_lbl": "Ser246" }, { "start_pos": 247, "end_pos": 247, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SCZ3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SCZ3" } ], "site_lbl": "Ser247" }, { "start_pos": 249, "end_pos": 249, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Thr", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SCZ3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SCZ3" } ], "site_lbl": "Thr249" }, { "start_pos": 901, "end_pos": 901, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Tyr", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SCZ3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SCZ3" }, { "database": "PubMed", "id": "19253305", "url": "https://glygen.org/publication/PubMed/19253305" } ], "site_lbl": "Tyr901" } ], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9SCZ3", "url": "https://www.uniprot.org/uniprotkb/Q9SCZ3" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Phosphoproteomic analysis of ethylene-regulated protein phosphorylation in etiolated seedlings of Arabidopsis mutant ein2 using two-dimensional separations coupled with a hybrid quadrupole time-of-flight mass spectrometer.", "journal": "Proteomics", "date": "2009-03", "authors": "Li Hao, Wong Wai Shing, Zhu Lin, Guo Hong Wei, Ecker Joseph, Li Ning", "evidence": [ { "database": "iPTMnet", "id": "Q9SCZ3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SCZ3" } ], "reference": [ { "type": "PubMed", "id": "19253305", "url": "https://glygen.org/publication/PubMed/19253305" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9SCZ3", "url": "https://www.uniprot.org/uniprotkb/Q9SCZ3" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G51560", "name": "", "url": 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"kinase_uniprot_canonical_ac", "kinase_gene_name", "residue", "comment", "site_lbl" ] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 3 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "Q9SCZ5-1", "uniprot_ac": "Q9SCZ5", "uniprot_id": "Q9SCZ5_ARATH", "mass": { "chemical_mass": 47254.0, "monoisotopic_mass": 47254.0 }, "refseq": { "ac": "NP_190722", "name": "mucin-5AC-like protein", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_190722" }, "gene_names": [ { "name": "BPP7", "type": "recommended", "evidence": [ { "id": "Q9SCZ5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SCZ5" } ] } ], "protein_names": [ { "name": "Mucin-5AC-like protein", "type": "synonym", "evidence": [ { "id": "Q9SCZ5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SCZ5/entry#names_and_taxonomy" } ] }, { "name": "mucin-5AC-like protein", "type": "synonym", "evidence": [ { "id": "NP_190722", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_190722" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9SCZ5", "url": "https://www.uniprot.org/uniprotkb/Q9SCZ5" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "BPP7", "url": "https://www.uniprot.org/uniprotkb/Q9SCZ5", "locus": {} } ], "crossref": [ { "id": "AT3G51540", "url": "https://bar.utoronto.ca/thalemine/portal.do?externalids=AT3G51540", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "824317", "url": "https://www.ncbi.nlm.nih.gov/gene/824317", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "ath:AT3G51540", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G51540", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "KIHANEP", "url": "https://omabrowser.org/oma/group/KIHANEP/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "NP_190722", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_190722", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G51540", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G51540", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "A0A1I9LNE4", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LNE4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A1I9LNE4-1", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LNE4-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A1I9LNE5", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LNE5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A1I9LNE5-1", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LNE5-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A1I9LNE6", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LNE6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A1I9LNE6-1", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LNE6-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9SCZ5", "url": "https://www.uniprot.org/uniprotkb/Q9SCZ5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9SCZ5-1", "url": "https://www.uniprot.org/uniprotkb/Q9SCZ5-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MSDRSLKKSLPGKSNRQADENLDLFSVNRGTSLDVLIKPGRHSFQQAKVAKHGPDDDNNHNIHANEPLYTIAEVPLGDLSRLVLEARNTTSKLQSITTTRVPLRSESDPSSRPTRSGSTIRPSNIPTIRSSSVPKKTTTTQIQASASVSSPKRTVSRSLTPSSRKTPSPTSTPSRISTTTSTTPSFKTAGDAQRSRSLTPRAKPQIAANASSRTNVRSSSVTSRPDRSTTVSATPRTPPRLKETVTLAFGRPVGHVNSPKRNTSPDVTRTRPKGRSASPSLIPTFSGTSHTTTTPKSIKPSATVADSTRPGRKLSRASVQMAINHLDLARNGKVSTHTFSSPMLYPHSIRSSSSGLRKPCGSSEGSCSSSNHEEEDGRSLTKEGNNTENKNDSARYDALLNVKDVKDTNWLLNIDDESPQSLIFDNAFDSPPDLFSPL", "length": 438, "header": "tr|Q9SCZ5-1|Q9SCZ5_ARATH Isoform 1 of Mucin-5AC-like protein OS=Arabidopsis thaliana OX=3702 GN=BPP7 PE=4 SV=1 CANONICAL=Q9SCZ5-1" }, "isoforms": [ { "isoform_ac": "A0A1I9LNE4-1", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LNE4/entry", "sequence": { "sequence": "MSDRSLKKSLPGKSNRQADENLDLFSVNRGTSLDGRHSFQQAKVAKHGPDDDNNHNIHANEPLYTIAEVPLGDLSRLVLEARNTTSKLQSITTTRVPLRSESDPSSRPTRSGSTIRPSNIPTIRSSSVPKKTTTTQIQASASVSSPKRTVSRSLTPSSRKTPSPTSTPSRISTTTSTTPSFKTAGDAQRSRSLTPRAKPQIAANASSRTNVRSSSVTSRPDRSTTVSATPRTPPRLKETVTLAFGRPVGHVNSPKRNTSPDVTRTRPKGRSASPSLIPTFSGTSHTTTTPKSIKPSATVADSTRPGRKLSRASVQMAINHLDLARNGKVSTHTFSSPMLYPHSIRSSSSGLRKPCGSSEGSCSSSNHEEEDGRSLTKEGNNTENKNDSARYDALLNVKDVKDTNWLLNIDDESPQSLIFDNAFDSPPDLFSPL", "length": 433, "header": "tr|A0A1I9LNE4-1|A0A1I9LNE4_ARATH Computationally mapped isoform of Mucin-5AC-like protein OS=Arabidopsis thaliana OX=3702 GN=BPP7 PE=4 SV=1 CANONICAL=Q9SCZ5-1" }, "locus": { "chromosome": "3", "start_pos": 19115224, "end_pos": 19117319, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G51540.3", "url": "https://www.ensemblgenomes.org/id/AT3G51540.3" }, { "database": "Ensembl Peptide", "id": "AT3G51540.3", "url": "https://www.ensemblgenomes.org/id/AT3G51540.3" } ] } }, { "isoform_ac": "A0A1I9LNE5-1", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LNE5/entry", "sequence": { "sequence": "MDLMMTIITIYMQMNQVPLGDLSRLVLEARNTTSKLQSITTTRVPLRSESDPSSRPTRSGSTIRPSNIPTIRSSSVPKKTTTTQIQASASVSSPKRTVSRSLTPSSRKTPSPTSTPSRISTTTSTTPSFKTAGDAQRSRSLTPRAKPQIAANASSRTNVRSSSVTSRPDRSTTVSATPRTPPRLKETVTLAFGRPVGHVNSPKRNTSPDVTRTRPKGRSASPSLIPTFSGTSHTTTTPKSIKPSATVADSTRPGRKLSRASVQMAINHLDLARNGKVSTHTFSSPMLYPHSIRSSSSGLRKPCGSSEGSCSSSNHEEEDGRSLTKEGNNTENKNDSARYDALLNVKDVKDTNWLLNIDDESPQSLIFDNAFDSPPDLFSPL", "length": 381, "header": "tr|A0A1I9LNE5-1|A0A1I9LNE5_ARATH Computationally mapped isoform of Mucin-5AC-like protein OS=Arabidopsis thaliana OX=3702 GN=BPP7 PE=4 SV=1 CANONICAL=Q9SCZ5-1" }, "locus": { "chromosome": "3", "start_pos": 19115184, "end_pos": 19117461, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G51540.2", "url": "https://www.ensemblgenomes.org/id/AT3G51540.2" }, { "database": "Ensembl Peptide", "id": "AT3G51540.2", "url": "https://www.ensemblgenomes.org/id/AT3G51540.2" } ] } }, { "isoform_ac": "A0A1I9LNE6-1", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LNE6/entry", "sequence": { "sequence": "MSDRSLKKSLPGKSNRQADENLDLFSVNRGTSLDVLIKPGRHSFQQAKVAKHGPDDDNNHNIHANEPLYTIAEVPLGDLSRLVLEARNTTSKLQSITTTRVPLRSESDPSSRPTRSGSTIRPSNIPTIRSSSVPKKTTTTQIQASASVSSPKRTVSRSLTPSSRKTPSPTSTPSRISTTTSTTPSFKTAGDAQRSRSLTPRAKPQIAANASSRTNVRSSSVTSRPDRSTTVSATPRTPPRLKETVTLAFGRPVGHVNSPKRNTSPDVTRTRPKGRSASPSLIPTFSGTSHTTTTPKSIKPSATVADSTRPGRKLSRASVQMAINHLVITFSCHYLIIAKYFCHL", "length": 344, "header": "tr|A0A1I9LNE6-1|A0A1I9LNE6_ARATH Computationally mapped isoform of Mucin-5AC-like protein OS=Arabidopsis thaliana OX=3702 GN=BPP7 PE=4 SV=1 CANONICAL=Q9SCZ5-1" }, "locus": { "chromosome": "3", "start_pos": 19115225, "end_pos": 19117410, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G51540.4", "url": "https://www.ensemblgenomes.org/id/AT3G51540.4" }, { "database": "Ensembl Peptide", "id": "AT3G51540.4", "url": "https://www.ensemblgenomes.org/id/AT3G51540.4" } ] } }, { "isoform_ac": "Q9SCZ5-1", "url": "https://www.uniprot.org/uniprotkb/Q9SCZ5/entry", "sequence": { "sequence": "MSDRSLKKSLPGKSNRQADENLDLFSVNRGTSLDVLIKPGRHSFQQAKVAKHGPDDDNNHNIHANEPLYTIAEVPLGDLSRLVLEARNTTSKLQSITTTRVPLRSESDPSSRPTRSGSTIRPSNIPTIRSSSVPKKTTTTQIQASASVSSPKRTVSRSLTPSSRKTPSPTSTPSRISTTTSTTPSFKTAGDAQRSRSLTPRAKPQIAANASSRTNVRSSSVTSRPDRSTTVSATPRTPPRLKETVTLAFGRPVGHVNSPKRNTSPDVTRTRPKGRSASPSLIPTFSGTSHTTTTPKSIKPSATVADSTRPGRKLSRASVQMAINHLDLARNGKVSTHTFSSPMLYPHSIRSSSSGLRKPCGSSEGSCSSSNHEEEDGRSLTKEGNNTENKNDSARYDALLNVKDVKDTNWLLNIDDESPQSLIFDNAFDSPPDLFSPL", "length": 438, "header": "tr|Q9SCZ5-1|Q9SCZ5_ARATH Isoform 1 of Mucin-5AC-like protein OS=Arabidopsis thaliana OX=3702 GN=BPP7 PE=4 SV=1 CANONICAL=Q9SCZ5-1" }, "locus": { "chromosome": "3", "start_pos": 19115184, "end_pos": 19117461, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G51540.1", "url": "https://www.ensemblgenomes.org/id/AT3G51540.1" }, { "database": "Ensembl Peptide", "id": "AT3G51540.1", "url": "https://www.ensemblgenomes.org/id/AT3G51540.1" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "other", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 172, "start_aa": "Thr", "end_pos": 172, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr172", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ], "filter_code": "000000000000000010000.00000000001000.0.01000" } ], "phosphorylation": [ { "start_pos": 130, "end_pos": 130, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SCZ5", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SCZ5" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" } ], "site_lbl": "Ser130" }, { "start_pos": 137, "end_pos": 137, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Thr", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SCZ5", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SCZ5" }, { "database": "PubMed", "id": "27532006", "url": "https://glygen.org/publication/PubMed/27532006" } ], "site_lbl": "Thr137" }, { "start_pos": 138, "end_pos": 138, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Thr", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SCZ5", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SCZ5" }, { "database": "PubMed", "id": "27532006", "url": "https://glygen.org/publication/PubMed/27532006" } ], "site_lbl": "Thr138" }, { "start_pos": 234, "end_pos": 234, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Thr", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SCZ5", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SCZ5" }, { "database": "PubMed", "id": "28011693", "url": "https://glygen.org/publication/PubMed/28011693" } ], "site_lbl": "Thr234" } ], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9SCZ5", "url": "https://www.uniprot.org/uniprotkb/Q9SCZ5" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "A large-scale protein phosphorylation analysis reveals novel phosphorylation motifs and phosphoregulatory networks in Arabidopsis.", "journal": "Journal of proteomics", "date": "2013-01-14", "authors": "Wang Xu, Bian Yangyang, Cheng Kai, Gu Li-Fei, Ye Mingliang, Zou Hanfa, Sun Samuel Sai-Ming, He Jun-Xian", "evidence": [ { "database": "iPTMnet", "id": "Q9SCZ5", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SCZ5" } ], "reference": [ { "type": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" } ] }, { "title": "Comprehensive Analysis of the Membrane Phosphoproteome Regulated by Oligogalacturonides in Arabidopsis thaliana.", "journal": "Frontiers in plant science", "date": "2016", "authors": "Mattei Benedetta, Spinelli Francesco, Pontiggia Daniela, De Lorenzo Giulia", "evidence": [ { "database": "iPTMnet", "id": "Q9SCZ5", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SCZ5" } ], "reference": [ { "type": "PubMed", "id": "27532006", "url": "https://glygen.org/publication/PubMed/27532006" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9SCZ5", "url": "https://www.uniprot.org/uniprotkb/Q9SCZ5" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] }, { "title": "Protein Phosphatase 2Cs and Microtubule-Associated Stress Protein 1 Control Microtubule Stability, Plant Growth, and Drought Response.", "journal": "The Plant cell", "date": "2017-01", "authors": "Bhaskara Govinal Badiger, Wen Tuan-Nan, Nguyen Thao Thi, Verslues Paul E", "evidence": [ { "database": "iPTMnet", "id": "Q9SCZ5", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SCZ5" } ], "reference": [ { "type": "PubMed", "id": "28011693", "url": "https://glygen.org/publication/PubMed/28011693" } ] } ], "pathway": [ { "id": "ath:AT3G51540", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G51540", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 3, "go_terms": [ { "name": "cortical microtubule", "id": "GO:0055028", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0055028", "evidence": [ { "database": "UniProtKB", "id": "Q9SCZ5", "url": "https://www.uniprot.org/uniprotkb/Q9SCZ5" } ], "pmid": "" }, { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", 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[ "Protein Classification" ] }, { "id": "PTHR36042", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR36042", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR36042:SF1", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR36042:SF1", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "NP_190719", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_190719", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G51510", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G51510", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9SCZ8", "url": "https://www.uniprot.org/uniprotkb/Q9SCZ8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9SCZ8-1", "url": "https://www.uniprot.org/uniprotkb/Q9SCZ8-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": 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"https://www.uniprot.org/uniprotkb/Q9SD09-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MAASYHVRSSSLPARLHPHGLNQIQQLLNKLRADDNNSLSLLSNLYDSVSHLFNDSPSSLLVPHHSFFTHLLDLSLLHLDLCSKLRDITCRIKDCLRDLRSAFRRRRHSGDSTIRCHVKAFIRSRKAVHKDIAKLLLLLKQTGLSSSESSHPLITLLQQVCSQTCQTFRTVLLSLSTAVPKPRPSKWALVTKLVIKNVTSTSGQVRTGHRNEFQMMDEELRRFSMAEEIKKDRIKSMITNLDKVDVAVEDLEESLERLYRRMIQARVSLLNILSLHI", "length": 277, "header": "tr|Q9SD09-1|Q9SD09_ARATH Isoform 1 of Uncharacterized protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9SD09-1" }, "isoforms": [ { "isoform_ac": "Q9SD09-1", "url": "https://www.uniprot.org/uniprotkb/Q9SD09/entry", "sequence": { "sequence": "MAASYHVRSSSLPARLHPHGLNQIQQLLNKLRADDNNSLSLLSNLYDSVSHLFNDSPSSLLVPHHSFFTHLLDLSLLHLDLCSKLRDITCRIKDCLRDLRSAFRRRRHSGDSTIRCHVKAFIRSRKAVHKDIAKLLLLLKQTGLSSSESSHPLITLLQQVCSQTCQTFRTVLLSLSTAVPKPRPSKWALVTKLVIKNVTSTSGQVRTGHRNEFQMMDEELRRFSMAEEIKKDRIKSMITNLDKVDVAVEDLEESLERLYRRMIQARVSLLNILSLHI", "length": 277, "header": 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"11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9SD09", "url": "https://www.uniprot.org/uniprotkb/Q9SD09" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G51400", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G51400", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "Q9SD09", "url": 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"UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9SD45-1", "url": "https://www.uniprot.org/uniprotkb/Q9SD45-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MTSSVREKKIKTNGIWLNVAEKGDEEGPLVLLLHGFPETWYSWRHQIDFLSSHGYHVVAPDLRGYGDSDSLPSHESYTVSHLVADVIGLLDHYGTTQAFVAGHDWGAIIGWCLCLFRPDRVKGFISLSVPYFPRDPKLKPSDFFKIFGDGLYITQFQKPGRAEAAFAKHDCLSVMKKFLLITRTDYLVAPPDTEIIDHLEIPSTIPDWITEEEIQVYAEKFQRSGFTGPLNYYRSMDMNWEILAPWQDSKIVVPTKFIAGDKDIGYEGPNGTMEYVKGEVFKIVVPNLEIVVIEGGHHFIQQEKSEQVSQEILSFLNKLSKTE", "length": 323, "header": "tr|Q9SD45-1|Q9SD45_ARATH Isoform 1 of soluble epoxide hydrolase OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SD45-1" }, "isoforms": [ { "isoform_ac": "Q9SD45-1", "url": "https://www.uniprot.org/uniprotkb/Q9SD45/entry", "sequence": { "sequence": "MTSSVREKKIKTNGIWLNVAEKGDEEGPLVLLLHGFPETWYSWRHQIDFLSSHGYHVVAPDLRGYGDSDSLPSHESYTVSHLVADVIGLLDHYGTTQAFVAGHDWGAIIGWCLCLFRPDRVKGFISLSVPYFPRDPKLKPSDFFKIFGDGLYITQFQKPGRAEAAFAKHDCLSVMKKFLLITRTDYLVAPPDTEIIDHLEIPSTIPDWITEEEIQVYAEKFQRSGFTGPLNYYRSMDMNWEILAPWQDSKIVVPTKFIAGDKDIGYEGPNGTMEYVKGEVFKIVVPNLEIVVIEGGHHFIQQEKSEQVSQEILSFLNKLSKTE", "length": 323, "header": "tr|Q9SD45-1|Q9SD45_ARATH Isoform 1 of soluble epoxide hydrolase OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SD45-1" }, "locus": { "chromosome": "3", "start_pos": 18945025, "end_pos": 18946621, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G51000.1", "url": "https://www.ensemblgenomes.org/id/AT3G51000.1" }, { "database": "Ensembl Peptide", "id": "AT3G51000.1", "url": "https://www.ensemblgenomes.org/id/AT3G51000.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [ "enzyme" ], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9SD45", "url": "https://www.uniprot.org/uniprotkb/Q9SD45" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9SD45", "url": "https://www.uniprot.org/uniprotkb/Q9SD45" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G51000", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G51000", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A0R4ILH2-1", "protein_name": "Epoxide hydrolase 4", "gene_name": "ephx4", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MARLLHNLLLLTVGLTLKIRVMGYWSLIYGYCALCTGVALIKLGWNIILRPSTTFQWTVREIPPSCLNDTSLGTHCYVRIKESGLRFHYVAAGERGKPLMLFLHGFPEFWFSWRHQLREFKSEFRVVAVDMRGYGESDLPSSTESYRLDYLVTDIKDIVEYLGYNRCFLVGHDWGGIIAWLCAIHYPEMVTKLIVLNSPHPCVFTDYALRHPSQMLKSSYYFFFQLPYFPELMLSINDFKALKSLFTSRSTGISCKGRWLTTEDLEAYLYALSQPGALTGALNYFRNVFSVLPLSHSEVKSPVLLLWGERDAFLEQDMAEACRLYIRNLFRLNIISGASHWLQQDQPDIVNKLIWTFIKEGEGRKNYRNL", "length": 370 }, "evidence": [ { "id": "Q9SD45", "url": "https://omabrowser.org/oma/group/Q9SD45/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q9SD45", "url": "https://www.uniprot.org/uniprotkb/Q9SD45" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "hydrolase activity", "id": "GO:0016787", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016787", "evidence": [ { "database": "UniProtKB", "id": "Q9SD45", "url": "https://www.uniprot.org/uniprotkb/Q9SD45" } ], "pmid": "" }, { "name": "epoxide hydrolase activity", "id": "GO:0004301", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004301", "evidence": [ { "database": "UniProtKB", "id": "Q9SD45", "url": "https://www.uniprot.org/uniprotkb/Q9SD45" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 270, "end_pos": 272, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [ { "id": "19037", "name": "", "equation": "an epoxide + H2O = an ethanediol", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [ "Q9FY49-1", "F4JKY6-1", "Q9M9W5-1", "O48789-1", "O81299-1", "Q9SD45-1" ], "evidence": [ { "id": "19037", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/19037" } ] }, { "id": "81855", "name": "", "equation": "(24S)-24,25-epoxycucurbitadienol + H2O = (24R)-24,25-dihydroxycucurbitadienol", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [ "Q9M9W5-1", "F4JKY6-1", "O48789-1", "O81299-1", "Q9SD45-1" ], "evidence": [ { "id": "81855", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/81855" } ] } ], "reaction_participants": [], "reaction_enzymes": [ { "uniprot_ac": "F4JKY6", "gene_name": "DL4016C", "activity": [ { "ec_number": "3.3.2.10", "activity": "an epoxide + H2O = an ethanediol.", "evidence": [ { "id": "F4JKY6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4JKY6" } ] }, { "ec_number": "3.3.2.10", "activity": "", "evidence": [ { "id": "F4JKY6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4JKY6" } ] } ] }, { "uniprot_ac": "O48789", "gene_name": "", "activity": [ { "ec_number": "3.3.2.10", "activity": "an epoxide + H2O = an ethanediol.", "evidence": [ { 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"database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FY49" } ] } ] }, { "uniprot_ac": "Q9M9W5", "gene_name": "ATEH1", "activity": [ { "ec_number": "3.3.2.10", "activity": "an epoxide + H2O = an ethanediol.", "evidence": [ { "id": "Q9M9W5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9M9W5" } ] }, { "ec_number": "3.3.2.10", "activity": "", "evidence": [ { "id": "Q9M9W5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9M9W5" } ] } ] }, { "uniprot_ac": "Q9SD45", "gene_name": "", "activity": [ { "ec_number": "3.3.2.10", "activity": "an epoxide + H2O = an ethanediol.", "evidence": [ { "id": "Q9SD45", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SD45" } ] }, { "ec_number": "3.3.2.10", "activity": "", "evidence": [ { "id": "Q9SD45", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SD45" } ] } ] } ], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "Q9SD45", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SD45" }, { "id": "PF00561", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00561" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "AB hydrolase-1", "eco_id": "ECO_0000259", "start_pos": 28, "end_pos": 176, "start_aa": "Pro", "end_aa": "Lys", "glycosite_overlap": [] } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [ { "ec_number": "3.3.2.10", "ec_name": "an epoxide + H2O = an ethanediol.", "evidence": [ { "id": "3.3.2.10", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/?query=ec:3.3.2.10" }, { "id": "3.3.2.10", "database": "BRENDA Enzymes", "url": "https://www.brenda-enzymes.org/enzyme.php?ecno=3.3.2.10" } ] } ], "cluster_types": [ { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 270, "end_pos": 272 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": 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"total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "Q9SD48-1", "uniprot_ac": "Q9SD48", "uniprot_id": "Q9SD48_ARATH", "mass": { "chemical_mass": 54806.0, "monoisotopic_mass": 54806.0 }, "refseq": { "ac": "NP_190309", "name": "transmembrane protein, putative (DUF247)", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_190309" }, "gene_names": [], "protein_names": [ { "name": "Transmembrane protein, putative (DUF247)", "type": "synonym", "evidence": [ { "id": "Q9SD48", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SD48/entry#names_and_taxonomy" } ] }, { "name": "transmembrane protein, putative (DUF247)", "type": "synonym", "evidence": [ { "id": "NP_190309", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_190309" } ] } ], 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"https://omabrowser.org/oma/group/CSINRAF/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR26312", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR26312", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR26312:SF212", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR26312:SF212", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "NP_190292", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_190292", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G47080", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G47080", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9SD65", "url": "https://www.uniprot.org/uniprotkb/Q9SD65", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9SD65-1", "url": "https://www.uniprot.org/uniprotkb/Q9SD65-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MEVKVATTTSFHWSGRHTAIPQCPSFSQTLTSSKRRRSRGIAGDVSVGGGSLRLKPSTFLGTQSGKLHRSKSCELWQFSNSTTKKIRTDVKKKHNPLRRVCSASSGFFSSDEAFSVKMQELASQFRNAGDEEEEENKQKSEAVDNDNDSNNHRFGSLKLLQESVPGLASLEAPWAEMVNHSSIERKANSVDLPLSLRIIKRKLQEEALKKASATTYCSINRAFSSMVFMIEELHSFALQTRVGVLKQVKKEMHASLLWIFQRVFSQTPTLMVYVMILLANYTVHSVASNLPIAASPPVVNKGPDQTQQRIDFSSLKESTKLDGSKWLGSINFDKVSHLPRHRDSVSGEGMREEEVSLWNSMVEEADQMQDSSVDRDMRLRLVSPITARIELDDYANYTRTELLYKIGLAQEPDNHLLLANYAQFLYLVTQDHERAENCFKKAIESEDVDAETYSKYAIFLWKVRNDLWAAEENFLEAISADPTNSFYAANYANFLWNTGGEETCFPLEDSTQEMV", "length": 515, "header": "tr|Q9SD65-1|Q9SD65_ARATH Isoform 1 of Tetratricopeptide repeat (TPR)-like superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SD65-1" }, "isoforms": [ { "isoform_ac": "Q9SD65-1", "url": "https://www.uniprot.org/uniprotkb/Q9SD65/entry", "sequence": { "sequence": "MEVKVATTTSFHWSGRHTAIPQCPSFSQTLTSSKRRRSRGIAGDVSVGGGSLRLKPSTFLGTQSGKLHRSKSCELWQFSNSTTKKIRTDVKKKHNPLRRVCSASSGFFSSDEAFSVKMQELASQFRNAGDEEEEENKQKSEAVDNDNDSNNHRFGSLKLLQESVPGLASLEAPWAEMVNHSSIERKANSVDLPLSLRIIKRKLQEEALKKASATTYCSINRAFSSMVFMIEELHSFALQTRVGVLKQVKKEMHASLLWIFQRVFSQTPTLMVYVMILLANYTVHSVASNLPIAASPPVVNKGPDQTQQRIDFSSLKESTKLDGSKWLGSINFDKVSHLPRHRDSVSGEGMREEEVSLWNSMVEEADQMQDSSVDRDMRLRLVSPITARIELDDYANYTRTELLYKIGLAQEPDNHLLLANYAQFLYLVTQDHERAENCFKKAIESEDVDAETYSKYAIFLWKVRNDLWAAEENFLEAISADPTNSFYAANYANFLWNTGGEETCFPLEDSTQEMV", "length": 515, "header": "tr|Q9SD65-1|Q9SD65_ARATH Isoform 1 of Tetratricopeptide repeat (TPR)-like superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SD65-1" }, "locus": { "chromosome": "3", "start_pos": 17338102, "end_pos": 17340543, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G47080.1", "url": "https://www.ensemblgenomes.org/id/AT3G47080.1" }, { "database": "Ensembl Peptide", "id": "AT3G47080.1", "url": "https://www.ensemblgenomes.org/id/AT3G47080.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9SD65", "url": "https://www.uniprot.org/uniprotkb/Q9SD65" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9SD65", "url": "https://www.uniprot.org/uniprotkb/Q9SD65" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G47080", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G47080", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q9SD65", "url": "https://www.uniprot.org/uniprotkb/Q9SD65" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 147, "end_pos": 149, "annotation": "n_glycosylation_sequon" }, { "start_pos": 179, "end_pos": 181, "annotation": "n_glycosylation_sequon" }, { "start_pos": 280, "end_pos": 282, "annotation": "n_glycosylation_sequon" }, { "start_pos": 396, "end_pos": 398, "annotation": "n_glycosylation_sequon" }, { "start_pos": 80, "end_pos": 82, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 147, "end_pos": 149 }, { "start_pos": 179, "end_pos": 181 }, { "start_pos": 280, "end_pos": 282 }, { "start_pos": 396, "end_pos": 398 }, { "start_pos": 80, "end_pos": 82 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { 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"AT3G47030.1", "url": "https://www.ensemblgenomes.org/id/AT3G47030.1" }, { "database": "Ensembl Peptide", "id": "AT3G47030.1", "url": "https://www.ensemblgenomes.org/id/AT3G47030.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, 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Yoshihide, Johnson-Hopson Chanda, Hsuan Vickie W, Iida Kei, Karnes Meagan, Khan Shehnaz, Koesema Eric, Ishida Junko, Jiang Paul X, Jones Ted, Kawai Jun, Kamiya Asako, Meyers Cristina, Nakajima Maiko, Narusaka Mari, Seki Motoaki, Sakurai Tetsuya, Satou Masakazu, Tamse Racquel, Vaysberg Maria, Wallender Erika K, Wong Cecilia, Yamamura Yuki, Yuan Shiaulou, Shinozaki Kazuo, Davis Ronald W, Theologis Athanasios, Ecker Joseph R", "evidence": [ { "database": "UniProtKB", "id": "Q9SD70", "url": "https://www.uniprot.org/uniprotkb/Q9SD70" } ], "reference": [ { "type": "PubMed", "id": "14593172", "url": "https://glygen.org/publication/PubMed/14593172" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9SD70", "url": 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Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, 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0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 4 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "Q9SD86-1", "uniprot_ac": "Q9SD86", "uniprot_id": "Q9SD86_ARATH", "mass": { "chemical_mass": 164361.0, "monoisotopic_mass": 164361.0 }, "refseq": { "ac": "NP_001331534", "name": "dentin sialophosphoprotein-like protein", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001331534" }, "gene_names": [ { "name": "F13G24.2", "type": "synonym", "evidence": [ { "id": "NP_001331534", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001331534" }, { "id": "Q9SD86", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SD86" } ] } ], "protein_names": [ { "name": "Dentin sialophosphoprotein-like protein", "type": "synonym", "evidence": [ { "id": "Q9SD86", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SD86/entry#names_and_taxonomy" } ] }, { "name": "dentin sialophosphoprotein-like protein", "type": "synonym", "evidence": [ { "id": "NP_001331534", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001331534" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9SD86", "url": "https://www.uniprot.org/uniprotkb/Q9SD86" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9SD86", "locus": {} } ], "crossref": [ { "id": "AT5G07980", "url": "https://bar.utoronto.ca/thalemine/portal.do?externalids=AT5G07980", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "830692", "url": "https://www.ncbi.nlm.nih.gov/gene/830692", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "ath:AT5G07980", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT5G07980", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "Q9SD86", "url": "https://oglcnac.org/atlas/detail/Q9SD86", "database": "O-GlcNAc Atlas", "categories": [ "Glycoproteomics" ] }, { "id": "SWANELG", "url": "https://omabrowser.org/oma/group/SWANELG/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR31267", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31267", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR31267:SF7", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31267:SF7", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "NP_001331534", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001331534", "database": "RefSeq", "categories": 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"MPGNEFGERTHNFFGQEGLSQDQHQSQVVDGSWSSFSNGLVGNQRQIDPSLTADLKSYRTQQPVDPERGQSSNSQHGLNFTQQPMRSEYSRSVLQEPQQPTNGYMHGNLGLQTMPNEANVLGMDVESSRDKLSERGFTPDLHKIPTRFEMGESPVNYDFFGGQQQSNTQLPGMLQPLPRQQVSFNDMQLLKQQVMVKQMHEYQMQQQLQKQRLEARQLNSLNRNAVNGSCVSDNQSHMINGIPLQNASSNWLQPDLMTGNTNWMHRGISPAVQGSSSGLMITPDHGQANLMAQQFEPSLYGMPVSGTNAPHNAFSSSQMNRLAAQHGSANRTSSVTNQPTSFLNQGDVQDSHMLPRSTYPEKLLFSQTSVPSSNSMPNFESLQEDDSRERNISVQAKFGQMEGSGPSEQSFIKAPENINALQKSTALDPTEEKILFGSDDNLWEAFGNSTDMSLTGNLMSSSSDLFDGCPSLQSGSWSALMQSAVAETSSDDAGVHEWANNSTGPHANFHRGNMAQDLGAKTSNTLSGRVHSDSTRTAVQHLQDRGNSVADNGLLENSMAQRNLMAENIFHSSSSGVDGQNNSCSIRKNEGVEDRLGIWKAASNPNLVALKEQNPSMQRTSYGFGIAGAGNDSRHLDNNSLEKAIPHLNSRDGSQILESYSSNNAGSNEMVNTRDLSTLPGGKETQSGHVGVRPSIPRKFQYHPMGNIDVTDEPCRGKVSRFGQSQSLGQPAMNTLTDKGHVSQNDLNRTNKAFKGMGPENSPSTSASADRSVDRCNQVNSASSRLELLHKVDPSPENSSETNVTGIHEANAFADYGGQFRHNQASASQGFNLQLAPPSQLAPSPDNMQFFRNSLQPLNSFHTGPEKGGTSQSRFAPWGSNQSFHQSTHQGPFPGILGGSNMTSGFPYSRGYHQNQQMAVGTRQSAAINSVNSSSELSTPAVKERDESSDFDQRGHSAEGFRMLSASQPLVASSSPQQNSSSGMMSDPPAGISAPQLRFWNQPLPQSDILRPHPSPGNNMAVSFSRQEKTNQLSSQNGDVSLSGRDIVNMHELQSKDMGAKQTSNVASMFSKMVQSNNQSFGRSLPSNNFPKDSLRHDEQMAGSGEGDAPKMTVKRVENSAIDPQKVAPKGEQQSPSKSDSLVRDGLNHRESVNHMPYFGQNVTQSFSTKNHSASVGADHQQISPQMAPSWYSQYGTFKNGLVQPVNDTGRFTPLKIGEQSSNVGSSVDGTHSVQLSQHFKMQQMSGSTLGAEIPSSESLPHGATEQLLKVNKPKKRKTATSELIPWNKEVMQGHQRLKTLGEAEVDWARATNRFAEKVEFETLLEDSPPIKSKRRLVYTTQLMQQLCSPPPARVISLVASSNYEFVAYTAARGALGDACSSSSTDRSEGFWPPNISNPLSERTKTEKISDQYISKAAEDFISRTRKLETDFARLENGTTIPDLRVEVQDLEKFAVINRFAKFHPPSMDRTLNSVRINPQRYVTVAPMPQNIPDRVQCLSL", "length": 1501, "header": "tr|Q9SD86-1|Q9SD86_ARATH Isoform 1 of Dentin sialophosphoprotein-like protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SD86-1" }, "isoforms": [ { "isoform_ac": "Q9SD86-1", "url": "https://www.uniprot.org/uniprotkb/Q9SD86/entry", "sequence": { "sequence": "MPGNEFGERTHNFFGQEGLSQDQHQSQVVDGSWSSFSNGLVGNQRQIDPSLTADLKSYRTQQPVDPERGQSSNSQHGLNFTQQPMRSEYSRSVLQEPQQPTNGYMHGNLGLQTMPNEANVLGMDVESSRDKLSERGFTPDLHKIPTRFEMGESPVNYDFFGGQQQSNTQLPGMLQPLPRQQVSFNDMQLLKQQVMVKQMHEYQMQQQLQKQRLEARQLNSLNRNAVNGSCVSDNQSHMINGIPLQNASSNWLQPDLMTGNTNWMHRGISPAVQGSSSGLMITPDHGQANLMAQQFEPSLYGMPVSGTNAPHNAFSSSQMNRLAAQHGSANRTSSVTNQPTSFLNQGDVQDSHMLPRSTYPEKLLFSQTSVPSSNSMPNFESLQEDDSRERNISVQAKFGQMEGSGPSEQSFIKAPENINALQKSTALDPTEEKILFGSDDNLWEAFGNSTDMSLTGNLMSSSSDLFDGCPSLQSGSWSALMQSAVAETSSDDAGVHEWANNSTGPHANFHRGNMAQDLGAKTSNTLSGRVHSDSTRTAVQHLQDRGNSVADNGLLENSMAQRNLMAENIFHSSSSGVDGQNNSCSIRKNEGVEDRLGIWKAASNPNLVALKEQNPSMQRTSYGFGIAGAGNDSRHLDNNSLEKAIPHLNSRDGSQILESYSSNNAGSNEMVNTRDLSTLPGGKETQSGHVGVRPSIPRKFQYHPMGNIDVTDEPCRGKVSRFGQSQSLGQPAMNTLTDKGHVSQNDLNRTNKAFKGMGPENSPSTSASADRSVDRCNQVNSASSRLELLHKVDPSPENSSETNVTGIHEANAFADYGGQFRHNQASASQGFNLQLAPPSQLAPSPDNMQFFRNSLQPLNSFHTGPEKGGTSQSRFAPWGSNQSFHQSTHQGPFPGILGGSNMTSGFPYSRGYHQNQQMAVGTRQSAAINSVNSSSELSTPAVKERDESSDFDQRGHSAEGFRMLSASQPLVASSSPQQNSSSGMMSDPPAGISAPQLRFWNQPLPQSDILRPHPSPGNNMAVSFSRQEKTNQLSSQNGDVSLSGRDIVNMHELQSKDMGAKQTSNVASMFSKMVQSNNQSFGRSLPSNNFPKDSLRHDEQMAGSGEGDAPKMTVKRVENSAIDPQKVAPKGEQQSPSKSDSLVRDGLNHRESVNHMPYFGQNVTQSFSTKNHSASVGADHQQISPQMAPSWYSQYGTFKNGLVQPVNDTGRFTPLKIGEQSSNVGSSVDGTHSVQLSQHFKMQQMSGSTLGAEIPSSESLPHGATEQLLKVNKPKKRKTATSELIPWNKEVMQGHQRLKTLGEAEVDWARATNRFAEKVEFETLLEDSPPIKSKRRLVYTTQLMQQLCSPPPARVISLVASSNYEFVAYTAARGALGDACSSSSTDRSEGFWPPNISNPLSERTKTEKISDQYISKAAEDFISRTRKLETDFARLENGTTIPDLRVEVQDLEKFAVINRFAKFHPPSMDRTLNSVRINPQRYVTVAPMPQNIPDRVQCLSL", "length": 1501, "header": "tr|Q9SD86-1|Q9SD86_ARATH Isoform 1 of Dentin sialophosphoprotein-like protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SD86-1" }, "locus": { "chromosome": "5", "start_pos": 2549038, "end_pos": 2555724, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT5G07980.1", "url": "https://www.ensemblgenomes.org/id/AT5G07980.1" }, { "database": "Ensembl Peptide", "id": "AT5G07980.1", "url": "https://www.ensemblgenomes.org/id/AT5G07980.1" } ] } } ], "glycosylation": [ { "glytoucan_ac": "G49108TO", "type": "O-linked", "subtype": "O-GlcNAcylation", "prediction_tool_list": [], "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "T", "relation": "attached", "comment": "O-GlcNAcylation", "icn3d_view": {}, "start_pos": 1164, "start_aa": "Thr", "end_pos": 1164, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr1164", "evidence": [ { "id": "28154133", "database": "PubMed", "url": "https://glygen.org/publication/PubMed/28154133" }, { "id": "Q9SD86", "database": "O-GlcNAc Atlas", "url": "https://oglcnac.org/atlas/detail/Q9SD86" } ], "filter_code": "000000000000000010000.xxxxxxx.00000001000000.xxxxxxx.xxxxxxxxxx.xxxxxxxxxxxxxxxxxx.xxxxx.01000" }, { "glytoucan_ac": "G49108TO", "type": "O-linked", "subtype": "O-GlcNAcylation", "prediction_tool_list": [], "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "S", "relation": "attached", "comment": "O-GlcNAcylation", "icn3d_view": {}, "start_pos": 1173, "start_aa": "Ser", "end_pos": 1173, "end_aa": "Ser", "residue": "Ser", "site_lbl": "Ser1173", "evidence": [ { "id": "28154133", "database": "PubMed", "url": "https://glygen.org/publication/PubMed/28154133" }, { "id": "Q9SD86", "database": "O-GlcNAc Atlas", "url": "https://oglcnac.org/atlas/detail/Q9SD86" } ], "filter_code": "000000000000000100000.xxxxxxx.00000001000000.xxxxxxx.xxxxxxxxxx.xxxxxxxxxxxxxxxxxx.xxxxx.01000" }, { "glytoucan_ac": "G49108TO", "type": "O-linked", "subtype": "O-GlcNAcylation", "prediction_tool_list": [], "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "S", "relation": "attached", "comment": "O-GlcNAcylation", "icn3d_view": {}, "start_pos": 1175, "start_aa": "Ser", "end_pos": 1175, "end_aa": "Ser", "residue": "Ser", "site_lbl": "Ser1175", "evidence": [ { "id": "28154133", "database": "PubMed", "url": "https://glygen.org/publication/PubMed/28154133" }, { "id": "Q9SD86", "database": "O-GlcNAc Atlas", "url": "https://oglcnac.org/atlas/detail/Q9SD86" } ], "filter_code": "000000000000000100000.xxxxxxx.00000001000000.xxxxxxx.xxxxxxxxxx.xxxxxxxxxxxxxxxxxx.xxxxx.01000" }, { "glytoucan_ac": "", "type": "O-linked", "subtype": "other", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 1484, "start_aa": "Thr", "end_pos": 1484, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr1484", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ], "filter_code": "000000000000000010000.00000000001000.0.01000" }, { "glytoucan_ac": "G49108TO", "type": "O-linked", "subtype": "O-GlcNAcylation", "prediction_tool_list": [], "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "T", "relation": "attached", "comment": "O-GlcNAcylation", "icn3d_view": {}, "start_pos": 620, "start_aa": "Thr", "end_pos": 620, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr620", "evidence": [ { "id": "28154133", "database": "PubMed", "url": "https://glygen.org/publication/PubMed/28154133" }, { "id": "Q9SD86", "database": "O-GlcNAc Atlas", "url": "https://oglcnac.org/atlas/detail/Q9SD86" } ], "filter_code": "000000000000000010000.xxxxxxx.00000001000000.xxxxxxx.xxxxxxxxxx.xxxxxxxxxxxxxxxxxx.xxxxx.01000" }, { "glytoucan_ac": "G49108TO", "type": "O-linked", "subtype": "O-GlcNAcylation", "prediction_tool_list": [], "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "S", "relation": "attached", "comment": "O-GlcNAcylation", "icn3d_view": {}, "start_pos": 621, "start_aa": "Ser", "end_pos": 621, "end_aa": "Ser", "residue": "Ser", "site_lbl": "Ser621", "evidence": [ { "id": "28154133", "database": "PubMed", "url": "https://glygen.org/publication/PubMed/28154133" }, { "id": "Q9SD86", "database": "O-GlcNAc Atlas", "url": "https://oglcnac.org/atlas/detail/Q9SD86" } ], "filter_code": "000000000000000100000.xxxxxxx.00000001000000.xxxxxxx.xxxxxxxxxx.xxxxxxxxxxxxxxxxxx.xxxxx.01000" }, { "glytoucan_ac": "G49108TO", "type": "O-linked", "subtype": "O-GlcNAcylation", 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"end_aa": "Ser", "residue": "Ser", "site_lbl": "Ser72", "evidence": [ { "id": "28154133", "database": "PubMed", "url": "https://glygen.org/publication/PubMed/28154133" }, { "id": "Q9SD86", "database": "O-GlcNAc Atlas", "url": "https://oglcnac.org/atlas/detail/Q9SD86" } ], "filter_code": "000000000000000100000.xxxxxxx.00000001000000.xxxxxxx.xxxxxxxxxx.xxxxxxxxxxxxxxxxxx.xxxxx.01000" }, { "glytoucan_ac": "G49108TO", "type": "O-linked", "subtype": "O-GlcNAcylation", "prediction_tool_list": [], "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "S", "relation": "attached", "comment": "O-GlcNAcylation", "icn3d_view": {}, "start_pos": 74, "start_aa": "Ser", "end_pos": 74, "end_aa": "Ser", "residue": "Ser", "site_lbl": "Ser74", "evidence": [ { "id": "28154133", "database": "PubMed", "url": "https://glygen.org/publication/PubMed/28154133" }, { "id": "Q9SD86", "database": "O-GlcNAc Atlas", "url": "https://oglcnac.org/atlas/detail/Q9SD86" } ], "filter_code": "000000000000000100000.xxxxxxx.00000001000000.xxxxxxx.xxxxxxxxxx.xxxxxxxxxxxxxxxxxx.xxxxx.01000" }, { "glytoucan_ac": "G49108TO", "type": "O-linked", "subtype": "O-GlcNAcylation", "prediction_tool_list": [], "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "T", "relation": "attached", "comment": "O-GlcNAcylation", "icn3d_view": {}, "start_pos": 81, "start_aa": "Thr", "end_pos": 81, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr81", "evidence": [ { "id": "28154133", "database": "PubMed", "url": "https://glygen.org/publication/PubMed/28154133" }, { "id": "Q9SD86", "database": "O-GlcNAc Atlas", "url": "https://oglcnac.org/atlas/detail/Q9SD86" } ], "filter_code": "000000000000000010000.xxxxxxx.00000001000000.xxxxxxx.xxxxxxxxxx.xxxxxxxxxxxxxxxxxx.xxxxx.01000" }, { "glytoucan_ac": "G49108TO", "type": "O-linked", "subtype": "O-GlcNAcylation", "prediction_tool_list": [], "site_category": 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"length": 1097, "header": "tr|Q9SD87-1|Q9SD87_ARATH Isoform 1 of Dentin sialophosphoprotein-like protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SD87-1" }, "isoforms": [ { "isoform_ac": "Q9SD87-1", "url": "https://www.uniprot.org/uniprotkb/Q9SD87/entry", "sequence": { "sequence": 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"length": 1097, "header": "tr|Q9SD87-1|Q9SD87_ARATH Isoform 1 of Dentin sialophosphoprotein-like protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SD87-1" }, "locus": { "chromosome": "5", "start_pos": 2543742, "end_pos": 2548829, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT5G07970.2", "url": "https://www.ensemblgenomes.org/id/AT5G07970.2" }, { "database": "Ensembl Peptide", "id": "AT5G07970.2", "url": "https://www.ensemblgenomes.org/id/AT5G07970.2" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "other", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 1080, "start_aa": "Thr", "end_pos": 1080, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr1080", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ], "filter_code": "000000000000000010000.00000000001000.0.01000" }, { "glytoucan_ac": "", "type": "O-linked", "subtype": "other", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 308, "start_aa": "Thr", "end_pos": 308, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr308", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ], "filter_code": "000000000000000010000.00000000001000.0.01000" }, { "glytoucan_ac": "G49108TO", "type": "O-linked", "subtype": "O-GlcNAcylation", "prediction_tool_list": [], "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "", "relation": "attached", "comment": "O-GlcNAcylation", "icn3d_view": {}, "evidence": [ { "id": "28154133", "database": "PubMed", "url": "https://glygen.org/publication/PubMed/28154133" }, { "id": "Q9SD87", "database": "O-GlcNAc Database", "url": "https://www.oglcnac.mcw.edu/search/?query_protein=Q9SD87" } ], "filter_code": "000000000000000000000.xxxxxxx.00000001000000.xxxxxxx.xxxxxxxxxx.xxxxxxxxxxxxxxxxxx.xxxxx.01000" } ], "phosphorylation": [ { "start_pos": 523, "end_pos": 523, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SD87", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SD87" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ], "site_lbl": "Ser523" }, { "start_pos": 699, "end_pos": 699, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SD87", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SD87" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ], "site_lbl": "Ser699" }, { "start_pos": 722, "end_pos": 722, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SD87", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SD87" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ], "site_lbl": "Ser722" }, { "start_pos": 726, "end_pos": 726, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SD87", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SD87" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ], "site_lbl": "Ser726" } ], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_reported_with_glycan", "glycoprotein_predicted" ], "publication": [ { "title": "Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Tabata S, Kaneko T, Nakamura Y, Kotani H, Kato T, Asamizu E, Miyajima N, Sasamoto S, Kimura T, Hosouchi T, Kawashima K, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Naruo K, Okumura S, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Sato S, de la Bastide M, Huang E, Spiegel L, Gnoj L, O'Shaughnessy A, Preston R, Habermann K, Murray J, Johnson D, Rohlfing T, Nelson J, Stoneking T, Pepin K, Spieth J, Sekhon M, Armstrong J, Becker M, Belter E, Cordum H, Cordes M, Courtney L, Courtney W, Dante M, Du H, Edwards J, Fryman J, Haakensen B, Lamar E, Latreille P, Leonard S, Meyer R, Mulvaney E, Ozersky P, Riley A, Strowmatt C, Wagner-McPherson C, Wollam A, Yoakum M, Bell M, Dedhia N, Parnell L, Shah R, Rodriguez M, See L H, Vil D, Baker J, Kirchoff K, Toth K, King L, Bahret A, Miller B, Marra M, Martienssen R, McCombie W R, Wilson R K, Murphy G, Bancroft I, Volckaert G, Wambutt R, D\u00fcsterh\u00f6ft A, Stiekema W, Pohl T, Entian K D, Terryn N, Hartley N, Bent E, Johnson S, Langham S A, McCullagh B, Robben J, Grymonprez B, Zimmermann W, Ramsperger U, Wedler H, Balke K, Wedler E, Peters S, van Staveren M, Dirkse W, Mooijman P, Lankhorst R K, Weitzenegger T, Bothe G, Rose M, Hauf J, Berneiser S, Hempel S, Feldpausch M, Lamberth S, Villarroel R, Gielen J, Ardiles W, Bents O, Lemcke K, Kolesov G, Mayer K, Rudd S, Schoof H, Schueller C, Zaccaria P, Mewes H W, Bevan M, Fransz P, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9SD87", "url": "https://www.uniprot.org/uniprotkb/Q9SD87" } ], "reference": [ { "type": "PubMed", "id": "11130714", "url": "https://glygen.org/publication/PubMed/11130714" } ] }, { "title": "Quantitative phosphoproteomics of the ataxia telangiectasia-mutated (ATM) and ataxia telangiectasia-mutated and rad3-related (ATR) dependent DNA damage response in Arabidopsis thaliana.", "journal": "Molecular & cellular proteomics : MCP", "date": "2015-03", "authors": "Roitinger Elisabeth, Hofer Manuel, K\u00f6cher Thomas, Pichler Peter, Novatchkova Maria, Yang Jianhua, Schl\u00f6gelhofer Peter, Mechtler Karl", "evidence": [ { "database": "iPTMnet", "id": "Q9SD87", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SD87" } ], "reference": [ { "type": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9SD87", "url": "https://www.uniprot.org/uniprotkb/Q9SD87" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] }, { "title": "Proteomic analysis reveals O-GlcNAc modification on proteins with key regulatory functions in Arabidopsis.", "journal": "Proceedings of the National Academy of Sciences of the United States of America", "date": "2017-02-21", "authors": "Xu Shou-Ling, Chalkley Robert J, Maynard Jason C, Wang Wenfei, Ni Weimin, Jiang Xiaoyue, Shin Kihye, Cheng Ling, Savage Dasha, H\u00fchmer Andreas F R, Burlingame Alma L, Wang Zhi-Yong", "evidence": [ { "database": "O-GlcNAc Database", "id": "Q9SD87", "url": "https://www.oglcnac.mcw.edu/search/?query_protein=Q9SD87" } ], "reference": [ { "type": "PubMed", "id": "28154133", "url": "https://glygen.org/publication/PubMed/28154133" } ] } ], "pathway": [ { "id": "ath:AT5G07970", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT5G07970", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q9SD87", "url": "https://www.uniprot.org/uniprotkb/Q9SD87" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 227, "end_pos": 229, "annotation": "n_glycosylation_sequon" }, { "start_pos": 234, "end_pos": 236, "annotation": "n_glycosylation_sequon" }, { "start_pos": 331, "end_pos": 333, "annotation": "n_glycosylation_sequon" }, { "start_pos": 345, "end_pos": 347, "annotation": "n_glycosylation_sequon" }, { "start_pos": 388, "end_pos": 390, "annotation": "n_glycosylation_sequon" }, { "start_pos": 445, "end_pos": 447, "annotation": "n_glycosylation_sequon" }, { "start_pos": 576, "end_pos": 578, "annotation": "n_glycosylation_sequon" }, { "start_pos": 645, "end_pos": 647, "annotation": "n_glycosylation_sequon" }, { "start_pos": 671, "end_pos": 673, "annotation": "n_glycosylation_sequon" 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{ "name": "MTERF7", "url": "https://www.uniprot.org/uniprotkb/Q9SD94", "locus": {} } ], "crossref": [ { "id": "830684", "url": "https://www.ncbi.nlm.nih.gov/gene/830684", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "Q9SD94", "url": "https://www.ebi.ac.uk/intact/interactors/id:Q9SD94*", "database": "IntAct", "categories": [ "Other" ] }, { "id": "IPR003690", "url": "https://www.ebi.ac.uk/interpro/entry/IPR003690", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR038538", "url": "https://www.ebi.ac.uk/interpro/entry/IPR038538", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT5G07900", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT5G07900", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "WIFLEDH", "url": "https://omabrowser.org/oma/group/WIFLEDH/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "Q9SD94", "url": "https://www.orthodb.org/?gene=Q9SD94", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR13068", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR13068", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR13068:SF133", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR13068:SF133", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF02536", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF02536", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_568185", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_568185", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT5G07900", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT5G07900", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9SD94", "url": "https://www.uniprot.org/uniprotkb/Q9SD94", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9SD94-1", "url": "https://www.uniprot.org/uniprotkb/Q9SD94-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MAVAIPQATSLTNLVFLTKLIPRGSFTTILPKHHRKPIFVFSLQTQFSSPVTTLTSKNPKDDEQQQKLSFTLNYLIDSCGLSPDSATVASRKLLLDSPERPNTVLNLLRDHGFTTAQISSLVKKRPVLLLANAESVLLPKLSFFLSIGVSKSLLARTLASDPTILTRSLVNQLIPSYNFLKSVLDSDEKIVAALRRTTWVFLEDHTKNLVPNINYMAETGVPEKCIKLLLTHFPEAVMQKNHEFQAIAKQAQEMGFNPQKSTFVLAIHALSGKGNKSIWDKCFEVYQRWGWSEDDIMCAFKKHPHCMMLSERKINRTMEYFVNEMNMAPRSIAQCPVVLFFSLEKRIIPRCSVTKVLVSNGLVKEDWSLTSLLVPVEKVFLEKLVIKYEEELPELMNLYLGCTKL", "length": 405, "header": "tr|Q9SD94-1|Q9SD94_ARATH Isoform 1 of Mitochondrial transcription termination factor family protein OS=Arabidopsis thaliana OX=3702 GN=MTERF7 PE=1 SV=1 CANONICAL=Q9SD94-1" }, "isoforms": [ { "isoform_ac": "Q9SD94-1", "url": "https://www.uniprot.org/uniprotkb/Q9SD94/entry", "sequence": { "sequence": "MAVAIPQATSLTNLVFLTKLIPRGSFTTILPKHHRKPIFVFSLQTQFSSPVTTLTSKNPKDDEQQQKLSFTLNYLIDSCGLSPDSATVASRKLLLDSPERPNTVLNLLRDHGFTTAQISSLVKKRPVLLLANAESVLLPKLSFFLSIGVSKSLLARTLASDPTILTRSLVNQLIPSYNFLKSVLDSDEKIVAALRRTTWVFLEDHTKNLVPNINYMAETGVPEKCIKLLLTHFPEAVMQKNHEFQAIAKQAQEMGFNPQKSTFVLAIHALSGKGNKSIWDKCFEVYQRWGWSEDDIMCAFKKHPHCMMLSERKINRTMEYFVNEMNMAPRSIAQCPVVLFFSLEKRIIPRCSVTKVLVSNGLVKEDWSLTSLLVPVEKVFLEKLVIKYEEELPELMNLYLGCTKL", "length": 405, "header": "tr|Q9SD94-1|Q9SD94_ARATH Isoform 1 of Mitochondrial transcription termination factor family protein OS=Arabidopsis thaliana OX=3702 GN=MTERF7 PE=1 SV=1 CANONICAL=Q9SD94-1" }, "locus": { "chromosome": "5", "start_pos": 2520164, "end_pos": 2521546, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT5G07900.1", "url": "https://www.ensemblgenomes.org/id/AT5G07900.1" }, { "database": "Ensembl Peptide", "id": "AT5G07900.1", "url": "https://www.ensemblgenomes.org/id/AT5G07900.1" } ] } } ], "glycosylation": [], "phosphorylation": [], 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Miller B, Marra M, Martienssen R, McCombie W R, Wilson R K, Murphy G, Bancroft I, Volckaert G, Wambutt R, D\u00fcsterh\u00f6ft A, Stiekema W, Pohl T, Entian K D, Terryn N, Hartley N, Bent E, Johnson S, Langham S A, McCullagh B, Robben J, Grymonprez B, Zimmermann W, Ramsperger U, Wedler H, Balke K, Wedler E, Peters S, van Staveren M, Dirkse W, Mooijman P, Lankhorst R K, Weitzenegger T, Bothe G, Rose M, Hauf J, Berneiser S, Hempel S, Feldpausch M, Lamberth S, Villarroel R, Gielen J, Ardiles W, Bents O, Lemcke K, Kolesov G, Mayer K, Rudd S, Schoof H, Schueller C, Zaccaria P, Mewes H W, Bevan M, Fransz P, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9SD94", "url": "https://www.uniprot.org/uniprotkb/Q9SD94" } ], "reference": [ { "type": "PubMed", "id": "11130714", "url": "https://glygen.org/publication/PubMed/11130714" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9SD94", "url": "https://www.uniprot.org/uniprotkb/Q9SD94" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT5G07900", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT5G07900", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "nucleic acid binding", "id": "GO:0003676", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003676", "evidence": [ { "database": "UniProtKB", "id": "Q9SD94", "url": "https://www.uniprot.org/uniprotkb/Q9SD94" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 2, "go_terms": [ { "name": "DNA-templated transcription termination", "id": "GO:0006353", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006353", "evidence": [ { "database": "UniProtKB", "id": "Q9SD94", "url": "https://www.uniprot.org/uniprotkb/Q9SD94" } ], "pmid": "" }, { "name": "chloroplast organization", "id": "GO:0009658", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009658", "evidence": [ { "database": "UniProtKB", "id": "Q9SD94", "url": "https://www.uniprot.org/uniprotkb/Q9SD94" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "chloroplast", "id": "GO:0009507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009507", "evidence": [ { "database": "UniProtKB", "id": "Q9SD94", "url": "https://www.uniprot.org/uniprotkb/Q9SD94" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 275, "end_pos": 277, "annotation": "n_glycosylation_sequon" }, { "start_pos": 315, "end_pos": 317, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], 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"Q9SD97", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SD97" } ] } ], "protein_names": [ { "name": "HXXXD-type acyl-transferase family protein", "type": "synonym", "evidence": [ { "id": "Q9SD97", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SD97/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9SD97", "url": "https://www.uniprot.org/uniprotkb/Q9SD97" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9SD97", "locus": {} } ], "crossref": [ { "id": "830680", "url": "https://www.ncbi.nlm.nih.gov/gene/830680", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR023213", "url": 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"https://www.uniprot.org/uniprotkb/Q9SDA2", "locus": {} } ], "crossref": [ { "id": "830675", "url": "https://www.ncbi.nlm.nih.gov/gene/830675", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR012417", "url": "https://www.ebi.ac.uk/interpro/entry/IPR012417", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT5G07820", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT5G07820", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "DANPMEI", "url": "https://omabrowser.org/oma/group/DANPMEI/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "Q9SDA2", "url": "https://www.orthodb.org/?gene=Q9SDA2", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR33349", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR33349", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR33349:SF11", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR33349:SF11", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF07839", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF07839", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "AT5G07820", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT5G07820", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9SDA2", "url": "https://www.uniprot.org/uniprotkb/Q9SDA2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9SDA2-1", "url": "https://www.uniprot.org/uniprotkb/Q9SDA2-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MSEENISQVDDKCCLDDANPMEISVETIPVVDEEVQGDDDVLHPAAETNHASLKRYSTRVLDKKTGKAQVQTRYRGNQTSSTHDLCKHGKRREEDLVIKPWKVAKKKNVDSGDLGKGETLRKSLGNVSKPDKSSLQAAKREAAGEVVKSCDGLHVKKSETKSTSPSVSPVVRTVKKTNLVVNKASRISQNKSPKEDLSKNLKNKEKGKIVEPVRCDDVLEKTDLEVKKVSRISENKSSKEDTLKNKEKAKIDEPVRCDDVLEKTSLDAQKVSRISENKNSKEERLKNLKNKEKTNIDEPVRPDDAVEKTLYVVESSVEKKKKKMSTKSVKISETQQSSEKKIIRSTGKKSLSLLPSLPPPSEVVTGSDPRPIRQTTSRSKTSLPEKKQSGSANLVTNPKPESKIRPKRIGLKVTPPPPPTKQQMNFKKGKVLEPKPEDSTTTSIKFKKIVVQEPKLRTSDVNKKKKSLKDKREGVGKINGEGKREKVVLRHRKVEVKKKLQTLFNNVIEETVNKLEEVRKSKVKALVGAFETVISLQDNNRTSQKKKIQSKSTSSQVVEGC", "length": 561, "header": "tr|Q9SDA2-1|Q9SDA2_ARATH Isoform 1 of Plant calmodulin-binding protein-like protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SDA2-1" }, "isoforms": [ { "isoform_ac": "Q9SDA2-1", "url": "https://www.uniprot.org/uniprotkb/Q9SDA2/entry", "sequence": { "sequence": "MSEENISQVDDKCCLDDANPMEISVETIPVVDEEVQGDDDVLHPAAETNHASLKRYSTRVLDKKTGKAQVQTRYRGNQTSSTHDLCKHGKRREEDLVIKPWKVAKKKNVDSGDLGKGETLRKSLGNVSKPDKSSLQAAKREAAGEVVKSCDGLHVKKSETKSTSPSVSPVVRTVKKTNLVVNKASRISQNKSPKEDLSKNLKNKEKGKIVEPVRCDDVLEKTDLEVKKVSRISENKSSKEDTLKNKEKAKIDEPVRCDDVLEKTSLDAQKVSRISENKNSKEERLKNLKNKEKTNIDEPVRPDDAVEKTLYVVESSVEKKKKKMSTKSVKISETQQSSEKKIIRSTGKKSLSLLPSLPPPSEVVTGSDPRPIRQTTSRSKTSLPEKKQSGSANLVTNPKPESKIRPKRIGLKVTPPPPPTKQQMNFKKGKVLEPKPEDSTTTSIKFKKIVVQEPKLRTSDVNKKKKSLKDKREGVGKINGEGKREKVVLRHRKVEVKKKLQTLFNNVIEETVNKLEEVRKSKVKALVGAFETVISLQDNNRTSQKKKIQSKSTSSQVVEGC", "length": 561, "header": "tr|Q9SDA2-1|Q9SDA2_ARATH Isoform 1 of Plant calmodulin-binding protein-like protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SDA2-1" }, "locus": { "chromosome": "5", "start_pos": 2498550, "end_pos": 2501253, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT5G07820.1", "url": "https://www.ensemblgenomes.org/id/AT5G07820.1" }, { "database": "Ensembl Peptide", "id": "AT5G07820.1", "url": "https://www.ensemblgenomes.org/id/AT5G07820.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Tabata S, Kaneko T, Nakamura Y, Kotani H, Kato T, Asamizu E, Miyajima N, Sasamoto S, Kimura T, Hosouchi T, Kawashima K, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Naruo K, Okumura S, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Sato S, de la Bastide M, Huang E, Spiegel L, Gnoj L, O'Shaughnessy A, Preston R, Habermann K, Murray J, Johnson D, Rohlfing T, Nelson J, Stoneking T, Pepin K, Spieth J, Sekhon M, Armstrong J, Becker M, Belter E, Cordum H, Cordes M, Courtney L, Courtney W, Dante M, Du H, Edwards J, Fryman J, Haakensen B, Lamar E, Latreille P, Leonard S, Meyer R, Mulvaney E, Ozersky P, Riley A, Strowmatt C, Wagner-McPherson C, Wollam A, Yoakum M, Bell M, Dedhia N, Parnell L, Shah R, Rodriguez M, See L H, Vil D, Baker J, Kirchoff K, Toth K, King L, Bahret A, Miller B, Marra M, Martienssen R, McCombie W R, Wilson R K, Murphy G, Bancroft I, Volckaert G, Wambutt R, D\u00fcsterh\u00f6ft A, Stiekema W, Pohl T, Entian K D, Terryn N, Hartley N, Bent E, Johnson S, Langham S A, McCullagh B, Robben J, Grymonprez B, Zimmermann W, Ramsperger U, Wedler H, Balke K, Wedler E, Peters S, van Staveren M, Dirkse W, Mooijman P, Lankhorst R K, Weitzenegger T, Bothe G, Rose M, Hauf J, Berneiser S, Hempel S, Feldpausch M, Lamberth S, Villarroel R, Gielen J, Ardiles W, Bents O, Lemcke K, Kolesov G, Mayer K, Rudd S, Schoof H, Schueller C, Zaccaria P, Mewes H W, Bevan M, Fransz P, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9SDA2", "url": "https://www.uniprot.org/uniprotkb/Q9SDA2" } ], "reference": [ { "type": "PubMed", "id": "11130714", "url": "https://glygen.org/publication/PubMed/11130714" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9SDA2", "url": "https://www.uniprot.org/uniprotkb/Q9SDA2" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT5G07820", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT5G07820", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "calmodulin binding", "id": "GO:0005516", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005516", "evidence": [ { "database": "UniProtKB", "id": "Q9SDA2", "url": "https://www.uniprot.org/uniprotkb/Q9SDA2" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "Q9SDA2", "url": "https://www.uniprot.org/uniprotkb/Q9SDA2" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 126, "end_pos": 128, "annotation": "n_glycosylation_sequon" }, { "start_pos": 190, "end_pos": 192, "annotation": "n_glycosylation_sequon" }, { "start_pos": 235, "end_pos": 237, "annotation": "n_glycosylation_sequon" }, { "start_pos": 540, "end_pos": 542, "annotation": "n_glycosylation_sequon" }, { "start_pos": 5, "end_pos": 7, "annotation": "n_glycosylation_sequon" }, { "start_pos": 77, "end_pos": 79, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "Q9SDA2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SDA2" }, { "id": "SM01054", "database": "SMART", "url": "http://smart.embl.de/smart/do_annotation.pl?DOMAIN=SM01054" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Calmodulin-binding", "eco_id": "ECO_0000259", "start_pos": 420, "end_pos": 535, "start_aa": "Thr", "end_aa": "Ser", "glycosite_overlap": [] } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 126, "end_pos": 128 }, { "start_pos": 190, "end_pos": 192 }, { "start_pos": 235, "end_pos": 237 }, { "start_pos": 540, "end_pos": 542 }, { "start_pos": 5, "end_pos": 7 }, { "start_pos": 77, "end_pos": 79 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": 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"tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "Q9SF07-1", "uniprot_ac": "Q9SF07", "uniprot_id": "Q9SF07_ARATH", "mass": { "chemical_mass": 72577.0, "monoisotopic_mass": 72577.0 }, "refseq": {}, "gene_names": [ { "name": "F26K24.21", "type": "synonym", "evidence": [ { "id": "Q9SF07", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SF07" } ] } ], "protein_names": [ { "name": "Glutaredoxin-like protein", "type": "synonym", "evidence": [ { "id": "Q9SF07", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SF07/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9SF07", "url": "https://www.uniprot.org/uniprotkb/Q9SF07" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9SF07", "locus": {} } ], "crossref": [ { "id": "AT3G11920", "url": "https://bar.utoronto.ca/thalemine/portal.do?externalids=AT3G11920", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "cd03027", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd03027", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "cd04371", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd04371", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "820365", "url": "https://www.ncbi.nlm.nih.gov/gene/820365", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR000591", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000591", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR002109", "url": "https://www.ebi.ac.uk/interpro/entry/IPR002109", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR006869", "url": "https://www.ebi.ac.uk/interpro/entry/IPR006869", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036249", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036249", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036388", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036388", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036390", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036390", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT3G11920", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G11920", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "KMLKWIM", "url": "https://omabrowser.org/oma/group/KMLKWIM/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR46361", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR46361", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR46361:SF1", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR46361:SF1", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00462", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00462", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF00610", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00610", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF04784", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF04784", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "AT3G11920", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G11920", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9SF07", "url": "https://www.uniprot.org/uniprotkb/Q9SF07", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9SF07-1", "url": "https://www.uniprot.org/uniprotkb/Q9SF07-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MRFEESKNNCQNPRKSEKVTNGKSYTISSDIVSPPYSNSNPISDHVHPATPIPEAVSQSPMKEISIDDPYLPPHPQLPKLEPPRGRRVSLEELLHPKEKFTGDLMKFIRQSGNAISKRISVLLENDDDDDSIDDVTEFKISGVKVLVKMKNEEEIKGRITFFSRSNCRDSTAVRLFLRERGFDFSEINIDVYSSREKELVERTGSSQVPQIFFNEKHFGGLMALNSLRNSGEFDRRVKEFLKEKCCGDAPLPVMYGFDEESNNKDVVVVVDEMMRFVRVLRQKLPIKDRLMKMKIVKNCFSGAEMVEILIDYLDCGRKKAVEIGKRLAEKHFIHHVFGENEFEDGNHYYRFLEHEPFVSKCYNFRGSTNDMEPQSAAIVGQKLFKIMTAILESYSSNDHTSVDYMRISQSEEFRRYLNLAQDFHRLNLVELSTEEKLAFFLNLYNAMVIHALISIGRPEGLIARRSFFTDFQYVVGGYSYSLSSIRNDILRRGRKPSYPFIRPPFNNGKTRHELGLLKLNPLVHFGLCDGTKSSPVVRFFTPQGVEAELKRAAREFFQNGGIEVVLDKRTIHLSRIIKWYKEDFSEEKKMLKWIMGYIDSNDAGLLTHLLGDGGGSFNIVYQDYDWSTNN", "length": 630, "header": "tr|Q9SF07-1|Q9SF07_ARATH Isoform 1 of Glutaredoxin-like protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9SF07-1" }, "isoforms": [ { "isoform_ac": "Q9SF07-1", "url": "https://www.uniprot.org/uniprotkb/Q9SF07/entry", "sequence": { "sequence": "MRFEESKNNCQNPRKSEKVTNGKSYTISSDIVSPPYSNSNPISDHVHPATPIPEAVSQSPMKEISIDDPYLPPHPQLPKLEPPRGRRVSLEELLHPKEKFTGDLMKFIRQSGNAISKRISVLLENDDDDDSIDDVTEFKISGVKVLVKMKNEEEIKGRITFFSRSNCRDSTAVRLFLRERGFDFSEINIDVYSSREKELVERTGSSQVPQIFFNEKHFGGLMALNSLRNSGEFDRRVKEFLKEKCCGDAPLPVMYGFDEESNNKDVVVVVDEMMRFVRVLRQKLPIKDRLMKMKIVKNCFSGAEMVEILIDYLDCGRKKAVEIGKRLAEKHFIHHVFGENEFEDGNHYYRFLEHEPFVSKCYNFRGSTNDMEPQSAAIVGQKLFKIMTAILESYSSNDHTSVDYMRISQSEEFRRYLNLAQDFHRLNLVELSTEEKLAFFLNLYNAMVIHALISIGRPEGLIARRSFFTDFQYVVGGYSYSLSSIRNDILRRGRKPSYPFIRPPFNNGKTRHELGLLKLNPLVHFGLCDGTKSSPVVRFFTPQGVEAELKRAAREFFQNGGIEVVLDKRTIHLSRIIKWYKEDFSEEKKMLKWIMGYIDSNDAGLLTHLLGDGGGSFNIVYQDYDWSTNN", "length": 630, "header": "tr|Q9SF07-1|Q9SF07_ARATH Isoform 1 of Glutaredoxin-like protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9SF07-1" }, "locus": { "chromosome": "3", "start_pos": 3772311, "end_pos": 3774887, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G11920.1", "url": "https://www.ensemblgenomes.org/id/AT3G11920.1" }, { "database": "Ensembl Peptide", "id": "AT3G11920.1", "url": "https://www.ensemblgenomes.org/id/AT3G11920.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9SF07", "url": "https://www.uniprot.org/uniprotkb/Q9SF07" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9SF07", "url": "https://www.uniprot.org/uniprotkb/Q9SF07" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G11920", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G11920", "resource": "KEGG Pathway" } ], "orthologs": [], 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"database": "PROSITE", "url": "https://prosite.expasy.org/PS50186" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "DEP", "eco_id": "ECO_0000259", "start_pos": 280, "end_pos": 353, "start_aa": "Leu", "end_aa": "Glu", "glycosite_overlap": [] } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], 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"https://www.ncbi.nlm.nih.gov/protein/NP_001326444" }, "gene_names": [], "protein_names": [ { "name": "Sterile alpha motif (SAM) domain-containing protein", "type": "synonym", "evidence": [ { "id": "NP_001326444", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001326444" }, { "id": "Q9SF10", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SF10/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9SF10", "url": "https://www.uniprot.org/uniprotkb/Q9SF10" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9SF10", "locus": {} } ], "crossref": [ { "id": "AT3G11890", "url": "https://bar.utoronto.ca/thalemine/portal.do?externalids=AT3G11890", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "cd09487", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd09487", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "820362", "url": "https://www.ncbi.nlm.nih.gov/gene/820362", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR001660", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001660", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR013761", "url": "https://www.ebi.ac.uk/interpro/entry/IPR013761", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT3G11890", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G11890", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "RTGHNKP", "url": "https://omabrowser.org/oma/group/RTGHNKP/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR10627", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR10627", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR10627:SF68", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR10627:SF68", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF07647", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF07647", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_001326444", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001326444", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G11890", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G11890", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9SF10", "url": "https://www.uniprot.org/uniprotkb/Q9SF10", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9SF10-1", "url": "https://www.uniprot.org/uniprotkb/Q9SF10-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MAKLRPRQLELSKTVPSKLGFDGEEDAWVFVKKQKIFIVLPSLPLPQQQHFTLEKPAISPQLEAGFRESMEVTQDSTFVHTVVPSLPLPETPQSQAELRDALADTHFTTPVPTVVVPALPLPEQFILHKPETSHSQVQFRDCIANTHKTTPLHTVVHSLPVTEHSTLQKPTSSQSQVELRESIADTHGTTPLQTEISSLPLPQHFVLQKPATSQSQADTHETTLLHTILPSLPVPELCTLQKPATSQSQAELRANTRKATLVHAAAMPSLPVPEHYSLQKPSTSQSQAELRAKTRKATLVHAAAIPSLPVPEHYSLLKPSTSQSQAEVRTLTHKATHVHTAMPSLSVTEHCTLQKPATSQSQAETSRVQTVEPEACPDFTSVDKPEIVMSRSLTTRKAPAPKRSLQESRKNQDRRVEIHRRRAGHKPIRFPRVMCSSVVMDNEKLRVLNLEKKVEKAGGLNEWVGSIGLGREFERMLRGQRMSKFQMANLTMEKLKQMGALAVGPRRKLIHAIGCVYHPHCLRASFN", "length": 527, "header": "tr|Q9SF10-1|Q9SF10_ARATH Isoform 1 of Sterile alpha motif (SAM) domain-containing protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SF10-1" }, "isoforms": [ { "isoform_ac": "Q9SF10-1", "url": "https://www.uniprot.org/uniprotkb/Q9SF10/entry", "sequence": { "sequence": "MAKLRPRQLELSKTVPSKLGFDGEEDAWVFVKKQKIFIVLPSLPLPQQQHFTLEKPAISPQLEAGFRESMEVTQDSTFVHTVVPSLPLPETPQSQAELRDALADTHFTTPVPTVVVPALPLPEQFILHKPETSHSQVQFRDCIANTHKTTPLHTVVHSLPVTEHSTLQKPTSSQSQVELRESIADTHGTTPLQTEISSLPLPQHFVLQKPATSQSQADTHETTLLHTILPSLPVPELCTLQKPATSQSQAELRANTRKATLVHAAAMPSLPVPEHYSLQKPSTSQSQAELRAKTRKATLVHAAAIPSLPVPEHYSLLKPSTSQSQAEVRTLTHKATHVHTAMPSLSVTEHCTLQKPATSQSQAETSRVQTVEPEACPDFTSVDKPEIVMSRSLTTRKAPAPKRSLQESRKNQDRRVEIHRRRAGHKPIRFPRVMCSSVVMDNEKLRVLNLEKKVEKAGGLNEWVGSIGLGREFERMLRGQRMSKFQMANLTMEKLKQMGALAVGPRRKLIHAIGCVYHPHCLRASFN", "length": 527, "header": "tr|Q9SF10-1|Q9SF10_ARATH Isoform 1 of Sterile alpha motif (SAM) domain-containing protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SF10-1" }, "locus": { "chromosome": "3", "start_pos": 3755542, "end_pos": 3757809, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G11890.5", "url": "https://www.ensemblgenomes.org/id/AT3G11890.5" }, { "database": "Ensembl Peptide", "id": "AT3G11890.5", "url": "https://www.ensemblgenomes.org/id/AT3G11890.5" } ] } } ], "glycosylation": [], "phosphorylation": [ { "start_pos": 173, "end_pos": 173, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SF10", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SF10" } ], "site_lbl": "Ser173" }, { "start_pos": 246, "end_pos": 246, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SF10", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SF10" } ], "site_lbl": "Ser246" }, { "start_pos": 359, "end_pos": 359, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SF10", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SF10" } ], "site_lbl": "Ser359" }, { "start_pos": 59, "end_pos": 59, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SF10", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SF10" } ], "site_lbl": "Ser59" } ], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , 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"https://www.ensemblgenomes.org/id/AT3G11880.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, 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"field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "Q9SF13-1", "uniprot_ac": "Q9SF13", "uniprot_id": "Q9SF13_ARATH", "mass": { "chemical_mass": 28828.0, "monoisotopic_mass": 28828.0 }, "refseq": { "ac": "NP_187792", "name": "sterile alpha motif (SAM) domain protein", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_187792" }, "gene_names": [], "protein_names": [ { "name": "Sterile alpha motif (SAM) domain protein", "type": "synonym", "evidence": [ { "id": "Q9SF13", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SF13/entry#names_and_taxonomy" } ] }, { "name": "sterile alpha motif (SAM) domain protein", "type": "synonym", "evidence": [ { "id": "NP_187792", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_187792" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9SF13", "url": "https://www.uniprot.org/uniprotkb/Q9SF13" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9SF13", "locus": {} } ], "crossref": [ { "id": "AT3G11860", "url": "https://bar.utoronto.ca/thalemine/portal.do?externalids=AT3G11860", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "820359", "url": "https://www.ncbi.nlm.nih.gov/gene/820359", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "ath:AT3G11860", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G11860", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "WGEARSK", "url": "https://omabrowser.org/oma/group/WGEARSK/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "NP_187792", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_187792", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G11860", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G11860", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9SF13", "url": "https://www.uniprot.org/uniprotkb/Q9SF13", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9SF13-1", "url": "https://www.uniprot.org/uniprotkb/Q9SF13-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MGTVDIFNGYKMYKWGEARSKRGEEIATMDVIIRQLELSKAGPSKLGFDGEEDAWVFVKKQRLFIVSPSLPLPQQQHFTLEKPAISPQLEAGFRESMEVTQDSTFVHTVVPSLPLPEHFIRHKPETSESQAELRDVLADPHKTTHKPASSQSQVEFRDVMEDTHGTTPLQTEMSSLPLPQHFVLQKPAGTSQSKADTRKATLVHTVMPSLPVPEHYILQFVFNNISEKNMIYEFLISFLFQTFKYYLQYDKD", "length": 252, "header": "tr|Q9SF13-1|Q9SF13_ARATH Isoform 1 of Sterile alpha motif (SAM) domain protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9SF13-1" }, "isoforms": [ { "isoform_ac": "Q9SF13-1", "url": "https://www.uniprot.org/uniprotkb/Q9SF13/entry", "sequence": { "sequence": "MGTVDIFNGYKMYKWGEARSKRGEEIATMDVIIRQLELSKAGPSKLGFDGEEDAWVFVKKQRLFIVSPSLPLPQQQHFTLEKPAISPQLEAGFRESMEVTQDSTFVHTVVPSLPLPEHFIRHKPETSESQAELRDVLADPHKTTHKPASSQSQVEFRDVMEDTHGTTPLQTEMSSLPLPQHFVLQKPAGTSQSKADTRKATLVHTVMPSLPVPEHYILQFVFNNISEKNMIYEFLISFLFQTFKYYLQYDKD", "length": 252, "header": "tr|Q9SF13-1|Q9SF13_ARATH Isoform 1 of Sterile alpha motif (SAM) domain protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9SF13-1" }, "locus": { "chromosome": "3", "start_pos": 3744816, "end_pos": 3746850, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G11860.1", "url": "https://www.ensemblgenomes.org/id/AT3G11860.1" }, { "database": "Ensembl Peptide", "id": "AT3G11860.1", "url": "https://www.ensemblgenomes.org/id/AT3G11860.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9SF13", "url": "https://www.uniprot.org/uniprotkb/Q9SF13" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9SF13", "url": "https://www.uniprot.org/uniprotkb/Q9SF13" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G11860", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G11860", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "Q9SF13", "url": "https://www.uniprot.org/uniprotkb/Q9SF13" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 224, "end_pos": 226, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 224, "end_pos": 226 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": 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"count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "Q9SF14-1", "uniprot_ac": "Q9SF14", "uniprot_id": "Q9SF14_ARATH", "mass": { "chemical_mass": 57773.0, "monoisotopic_mass": 57773.0 }, "refseq": { "ac": "NP_187791", "name": "myosin-binding protein (Protein of unknown function, DUF593)", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_187791" }, "gene_names": [ { "name": "MYOB8", "type": "recommended", "evidence": [ { "id": "Q9SF14", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SF14" } ] } ], "protein_names": [ { "name": "GTD-binding domain-containing protein", "type": "recommended", "evidence": [ { "id": "Q9SF14", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SF14/entry#names_and_taxonomy" } ] }, { "name": "myosin-binding protein (Protein of unknown function, DUF593)", "type": "synonym", "evidence": [ { "id": "NP_187791", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_187791" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9SF14", "url": "https://www.uniprot.org/uniprotkb/Q9SF14" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "MYOB8", "url": "https://www.uniprot.org/uniprotkb/Q9SF14", "locus": {} } ], "crossref": [ { "id": "AT3G11850", "url": "https://bar.utoronto.ca/thalemine/portal.do?externalids=AT3G11850", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "820358", "url": "https://www.ncbi.nlm.nih.gov/gene/820358", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "Q9SF14", "url": "https://www.ebi.ac.uk/intact/interactors/id:Q9SF14*", "database": "IntAct", "categories": [ "Other" ] }, { "id": "IPR007656", "url": "https://www.ebi.ac.uk/interpro/entry/IPR007656", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT3G11850", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G11850", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "IKCCDCG", "url": "https://omabrowser.org/oma/group/IKCCDCG/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR31422", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31422", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR31422:SF28", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31422:SF28", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF04576", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF04576", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_187791", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_187791", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G11850", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G11850", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9SF14", "url": "https://www.uniprot.org/uniprotkb/Q9SF14", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9SF14-1", "url": "https://www.uniprot.org/uniprotkb/Q9SF14-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MESPIKCCDCGCDCCSSSPGSWIRSVKKRRHDELQTEKRFSIPELDDLDMFSNPRVQIENECELLRETVSNQQQTIQDLYHELEQERIASSTAADETVKMIQTLEREKAKIDLELKQLQRSVDETLNYENQEIEALENMVYQRDQTIQALTFETQAYKHRMMSFGLTEAEADGERSLLSRNPSMIDFSSEYDCPTQDYPPLKCNINENQDPLEADIYVADDENYPPADSPHGRVHLKTLDRRLSQMETNPSFTQLNRGRDVSEKGMVGESPRRQRHFRRISPTGSSSSHLGASKELRPDVFVDSPRSQSYSSKKMEDVSYTENNNAKDDLSEIGDDMSDRVYTIDSVHHSSVAHSGGVAEQKIEDGASDGNVVFPREHTDLGDPDITKLYMRLQALEADRESMKHALLSMRTEKAQMVLLKEIAQHLSKEVVPQRRLPLRKASIAGPLTFTPVFKWITSFVSWKRKARRSKYMYGMSGNNIGLQMLLEKVPRSRKWRCLRSTQV", "length": 504, "header": "tr|Q9SF14-1|Q9SF14_ARATH Isoform 1 of GTD-binding domain-containing protein OS=Arabidopsis thaliana OX=3702 GN=MYOB8 PE=1 SV=1 CANONICAL=Q9SF14-1" }, "isoforms": [ { "isoform_ac": "Q9SF14-1", "url": "https://www.uniprot.org/uniprotkb/Q9SF14/entry", "sequence": { "sequence": "MESPIKCCDCGCDCCSSSPGSWIRSVKKRRHDELQTEKRFSIPELDDLDMFSNPRVQIENECELLRETVSNQQQTIQDLYHELEQERIASSTAADETVKMIQTLEREKAKIDLELKQLQRSVDETLNYENQEIEALENMVYQRDQTIQALTFETQAYKHRMMSFGLTEAEADGERSLLSRNPSMIDFSSEYDCPTQDYPPLKCNINENQDPLEADIYVADDENYPPADSPHGRVHLKTLDRRLSQMETNPSFTQLNRGRDVSEKGMVGESPRRQRHFRRISPTGSSSSHLGASKELRPDVFVDSPRSQSYSSKKMEDVSYTENNNAKDDLSEIGDDMSDRVYTIDSVHHSSVAHSGGVAEQKIEDGASDGNVVFPREHTDLGDPDITKLYMRLQALEADRESMKHALLSMRTEKAQMVLLKEIAQHLSKEVVPQRRLPLRKASIAGPLTFTPVFKWITSFVSWKRKARRSKYMYGMSGNNIGLQMLLEKVPRSRKWRCLRSTQV", "length": 504, "header": "tr|Q9SF14-1|Q9SF14_ARATH Isoform 1 of GTD-binding domain-containing protein OS=Arabidopsis thaliana OX=3702 GN=MYOB8 PE=1 SV=1 CANONICAL=Q9SF14-1" }, "locus": { "chromosome": "3", "start_pos": 3738897, "end_pos": 3741662, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G11850.1", "url": "https://www.ensemblgenomes.org/id/AT3G11850.1" }, { "database": "Ensembl Peptide", "id": "AT3G11850.1", "url": 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"database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MVVKMMKWRPWPPLVTRKYEVKLSVKKLEGWDLVREGVPEKDRLTVEIRWKGPKATLGSLRRSVKRNFTKEAVGESDVVSWEDEEFQSLCSLTSYKDSLFYPWEITFSVFTNGMKQGQKNKAPVVGTAFLNLAEYACVTDKKEFDINIPLTLSACVASETHPLLFVSLSLLELRTTPETSDSAAQTAVVPLPLPSPSPQQPTETHSVEKEDVSAIKAGLRKVKIFTEFVSTRKAKKACREEEGRFSSFESSESLDDFETDFDEGKEELMSMRKSFSYGPLSYANGVGTSLNCGAKVSDEDEDWVYYSHRKSDVGAGCSDAEDSAAGLVYEASLLPRRSILPWRKRKLSFRSPKSKGEPLLKKDNGEEGGDDIDFDRRQLSSDEAHPPFGSKIDEDSSANPRTSFSEFGEDSFAIGSWEEKEVISRDGHMKLQTSVFLASIDQRSERAAGESACTALVAVIADWFQKNGNLMPIKSQFDSLIREGSLEWRNLCENETYMQKFPDKHFDLDTVLQAKIRPLTVIPGKSFVGFFHPDGMINEGRFEFLQGAMSFDSIWAEIISLEESSANGDSYDDDSPPHVYIVSWNDHFFVLKVEKEAYYIIDTLGERLYEGCDQAYVLKFDHKTVIHKILHTEEAGSESEPESEILSRGKESCKEYIKNFLAAIPIRELQEDIKKGLASTAPVHHRLQIEFHYTTNAEITSL", "length": 702, "header": "tr|Q9SF22-1|Q9SF22_ARATH Isoform 1 of Structural maintenance of chromosomes flexible hinge domain protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SF22-1" }, 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PE=1 SV=1 CANONICAL=Q9SF22-1" }, "locus": { "chromosome": "3", "start_pos": 3717894, "end_pos": 3721251, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G11760.1", "url": "https://www.ensemblgenomes.org/id/AT3G11760.1" }, { "database": "Ensembl Peptide", "id": "AT3G11760.1", "url": "https://www.ensemblgenomes.org/id/AT3G11760.1" } ] } } ], "glycosylation": [], "phosphorylation": [ { "start_pos": 380, "end_pos": 380, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SF22", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SF22" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ], "site_lbl": "Ser380" }, { "start_pos": 609, "end_pos": 609, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Tyr", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SF22", "url": 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Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9SF22", "url": "https://www.uniprot.org/uniprotkb/Q9SF22" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Quantitative phosphoproteomics of the ataxia telangiectasia-mutated (ATM) and ataxia telangiectasia-mutated and rad3-related (ATR) dependent DNA damage response in Arabidopsis thaliana.", "journal": "Molecular & cellular proteomics : MCP", "date": "2015-03", "authors": "Roitinger Elisabeth, Hofer Manuel, K\u00f6cher Thomas, Pichler Peter, Novatchkova Maria, Yang Jianhua, Schl\u00f6gelhofer Peter, Mechtler Karl", "evidence": [ { "database": "iPTMnet", "id": "Q9SF22", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SF22" } ], "reference": [ { "type": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9SF22", "url": "https://www.uniprot.org/uniprotkb/Q9SF22" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G11760", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G11760", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q9SF22", "url": "https://www.uniprot.org/uniprotkb/Q9SF22" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 494, "end_pos": 496, "annotation": "n_glycosylation_sequon" }, { "start_pos": 67, "end_pos": 69, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], 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"table_stats": [ { "field": "total", "count": 3 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "Q9SF24-1", "uniprot_ac": "Q9SF24", "uniprot_id": "LOR10_ARATH", "mass": { "chemical_mass": 22013.0, "monoisotopic_mass": 22013.0 }, "refseq": { "ac": "NP_187780", "name": "LURP-one-like protein (DUF567)", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_187780" }, "gene_names": [ { "name": "F26K24.3", "type": "synonym", "evidence": [ { "id": "Q9SF24", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SF24" } ] } ], "protein_names": [ { "name": "Protein LURP-one-related 10", "type": "recommended", "evidence": [ { "id": "Q9SF24", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SF24/entry#names_and_taxonomy" } ] }, { "name": "LURP-one-like protein (DUF567)", "type": "synonym", "evidence": [ { "id": "NP_187780", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_187780" } ] } ], "function": [ { "annotation": "Might be related to the phospholipid scramblase and tubby-like superfamily of membrane tethered transcription factors.", "evidence": [ { "database": "UniProtKB", "id": "Q9SF24", "url": "https://www.uniprot.org/uniprotkb/Q9SF24#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9SF24", "url": "https://www.uniprot.org/uniprotkb/Q9SF24" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9SF24", "locus": {} } ], "crossref": [ { "id": "Q9SF24", "url": "https://alphafold.ebi.ac.uk/entry/Q9SF24", "database": "AlphaFoldDB", "categories": [] }, { "id": "AT3G11740", "url": "https://bar.utoronto.ca/thalemine/portal.do?externalids=AT3G11740", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "820346", "url": "https://www.ncbi.nlm.nih.gov/gene/820346", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR007612", "url": "https://www.ebi.ac.uk/interpro/entry/IPR007612", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR025659", "url": "https://www.ebi.ac.uk/interpro/entry/IPR025659", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR038595", "url": "https://www.ebi.ac.uk/interpro/entry/IPR038595", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT3G11740", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G11740", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "AKMHREH", "url": "https://omabrowser.org/oma/group/AKMHREH/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "Q9SF24", "url": "https://www.orthodb.org/?gene=Q9SF24", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR31087", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31087", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR31087:SF155", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31087:SF155", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF04525", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF04525", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PR:Q9SF24", "url": "https://proconsortium.org/cgi-bin/entry_pro?id=PR:Q9SF24", "database": "PRO", "categories": [ "Protein" ] }, { "id": "NP_187780", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_187780", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G11740", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G11740", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9SF24", "url": "https://www.uniprot.org/uniprotkb/Q9SF24", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9SF24-1", "url": "https://www.uniprot.org/uniprotkb/Q9SF24-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MAIVSPNFCAPYPIELGIVRKVMTLTDGNFAVTDVNGNLLFKVKEPLFSISDKRILLDAYDTPILTLRENKVSLHDRWLVYRGKSTDQSDLLYTLKRSSMIQIMKPKLDIFLAHNKEMKICDFHVKGSWIDRSCVVYAGKSDAIVAQMHKKHTAQSILIGKSNFSVTVYPNVDFAFIVSLIVILDDINREDSED", "length": 194, "header": "sp|Q9SF24-1|LOR10_ARATH Isoform 1 of Protein LURP-one-related 10 OS=Arabidopsis thaliana OX=3702 GN= PE=2 SV=2 CANONICAL=Q9SF24-1" }, "isoforms": [ { "isoform_ac": "Q9SF24-1", "url": "https://www.uniprot.org/uniprotkb/Q9SF24/entry#Q9SF24-1", "sequence": { "sequence": "MAIVSPNFCAPYPIELGIVRKVMTLTDGNFAVTDVNGNLLFKVKEPLFSISDKRILLDAYDTPILTLRENKVSLHDRWLVYRGKSTDQSDLLYTLKRSSMIQIMKPKLDIFLAHNKEMKICDFHVKGSWIDRSCVVYAGKSDAIVAQMHKKHTAQSILIGKSNFSVTVYPNVDFAFIVSLIVILDDINREDSED", "length": 194, "header": "sp|Q9SF24-1|LOR10_ARATH Isoform 1 of Protein LURP-one-related 10 OS=Arabidopsis thaliana OX=3702 GN= PE=2 SV=2 CANONICAL=Q9SF24-1" }, "locus": { "chromosome": "3", "start_pos": 3712360, "end_pos": 3713537, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G11740.1", "url": "https://www.ensemblgenomes.org/id/AT3G11740.1" }, { "database": "Ensembl Peptide", "id": "AT3G11740.1", "url": "https://www.ensemblgenomes.org/id/AT3G11740.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9SF24", "url": "https://www.uniprot.org/uniprotkb/Q9SF24" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Whole genome sequence comparisons and 'full-length' cDNA sequences: a combined approach to evaluate and improve Arabidopsis genome annotation.", "journal": "Genome Res.", "date": "2004", "authors": "Castelli Vanina, Aury Jean-Marc, Jaillon Olivier, Wincker Patrick, Clepet Christian, Menard Manuella, Cruaud Corinne, Qu\u00e9tier Francis, Scarpelli Claude, Sch\u00e4chter Vincent, Temple Gary, Caboche Michel, Weissenbach Jean, Salanoubat Marcel", "evidence": [ { "database": "UniProtKB", "id": "Q9SF24", "url": "https://www.uniprot.org/uniprotkb/Q9SF24" } ], "reference": [ { "type": "PubMed", "id": "14993207", "url": "https://glygen.org/publication/PubMed/14993207" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9SF24", "url": "https://www.uniprot.org/uniprotkb/Q9SF24" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G11740", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G11740", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": {}, "pro_annotation": [], "site_annotation": [ { "start_pos": 163, "end_pos": 165, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-Q9SF24-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 194, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-Q9SF24-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/Q9SF24" } ], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 163, "end_pos": 165 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 3 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "Q9SF34-1", "uniprot_ac": "Q9SF34", "uniprot_id": "Q9SF34_ARATH", "mass": { "chemical_mass": 59538.0, "monoisotopic_mass": 59538.0 }, "refseq": { "ac": "NP_001030665", "name": "alpha/beta-Hydrolases superfamily protein", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001030665" }, "gene_names": [], "protein_names": [ { "name": "Alpha/beta-Hydrolases superfamily protein", "type": "synonym", "evidence": [ { "id": "Q9SF34", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SF34/entry#names_and_taxonomy" } ] }, { "name": "alpha/beta-Hydrolases superfamily protein", "type": "synonym", "evidence": [ { "id": "NP_001030665", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001030665" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9SF34", "url": "https://www.uniprot.org/uniprotkb/Q9SF34" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9SF34", "locus": {} } ], "crossref": [ { "id": "AT3G09690", "url": "https://bar.utoronto.ca/thalemine/portal.do?externalids=AT3G09690", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "820126", "url": "https://www.ncbi.nlm.nih.gov/gene/820126", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "Q9SF34", "url": "https://www.ebi.ac.uk/intact/interactors/id:Q9SF34*", "database": "IntAct", "categories": [ "Other" ] }, { "id": "IPR000073", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000073", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR029058", "url": "https://www.ebi.ac.uk/interpro/entry/IPR029058", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT3G09690", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G09690", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "LDMQYLA", "url": "https://omabrowser.org/oma/group/LDMQYLA/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR45763", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR45763", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR45763:SF8", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR45763:SF8", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00561", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00561", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_001030665", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001030665", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G09690", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G09690", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9SF34", "url": "https://www.uniprot.org/uniprotkb/Q9SF34", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9SF34-1", "url": "https://www.uniprot.org/uniprotkb/Q9SF34-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MEEMRRGVPTWQDELASLMDGGLQYDGSPIDLTADTESRSKSSGFESGSGSESVESLKDQVTGFMKSWGEMLMDLAIGCKDVVQQMVVTDDSFVVRKLRKPAAKVSKKLSFLNEYLPEDRDPVHAWPVIFFVFLLALTALSFSSDHDRSVPLLKKIRLHPTSASRVQLPDGRYLAYQELGVSADRARHSLIVPHSFLSSRLAGIPGVKESLLKDYGVRLVSYDLPGFGESDPHRARNLSSSASDMIDLAAALGIVDKFWLLGYSSGSVHAWAAMRYFPDQIAGVAMVAPMINPYEPSMTKEEMAKTWEQWQRKRKFMYFLARRWPSLLPFSYRRSFLSGNLEPLDKWMSVSLGEKDKLVTADPVFEDLYQRNVEESVRQGTAKPFVEEAALQVSNWGFSLPEFHMQKKCRTNGVLSWLMSMYSESECELIGFRKPIHIWQGMDDRVTPPSVTDYISRVIPEATVHRLPNEGHFSYFYLCDECHTQIFSAIFGEPKGPVELLEQRTETHRPDQPKTGLSDSSSLPKSK", "length": 527, "header": "tr|Q9SF34-1|Q9SF34_ARATH Isoform 1 of Alpha/beta-Hydrolases superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SF34-1" }, "isoforms": [ { "isoform_ac": "Q9SF34-1", "url": "https://www.uniprot.org/uniprotkb/Q9SF34/entry", "sequence": { "sequence": 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"IPR026960", "url": "https://www.ebi.ac.uk/interpro/entry/IPR026960", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036397", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036397", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR044730", "url": "https://www.ebi.ac.uk/interpro/entry/IPR044730", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR052929", "url": "https://www.ebi.ac.uk/interpro/entry/IPR052929", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT3G09510", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G09510", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "LASFPWI", "url": "https://omabrowser.org/oma/group/LASFPWI/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR47074", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR47074", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR47074:SF78", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR47074:SF78", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF13456", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF13456", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF13966", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF13966", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_187562", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_187562", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G09510", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G09510", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9SF52", "url": "https://www.uniprot.org/uniprotkb/Q9SF52", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9SF52-1", "url": "https://www.uniprot.org/uniprotkb/Q9SF52-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MKARYFKDVSILDAKVRKQQSYGWASLLDGIALLKKGTRHLIGDGQNIRIGLDNIVDSHPPRPLNTEETYKEMTINNLFERKGSYYFWDDSKISQFVDQSDHGFIHRIYLAKSKKPDKIIWNYNTTGEYTVRSGYWLLTHDPSTNIPAINPPHGSIDLKTRIWNLPIMPKLKHFLWRALSQALATTERLTTRGMRIDPSCPRCHRENESINHALFTCPFATMAWRLSDSSLIRNQLMSNDFEENISNILNFVQDTTMSDFHKLLPVWLIWRIWKARNNVVFNKFRESPSKTVLSAKAETHDWLNATQSHKKTPSPTRQIAENKIEWRNPPATYVKCNFDAGFDVQKLEATGGWIIRNHYGTPISWGSMKLAHTSNPLEAETKALLAALQQTWIRGYTQVFMEGDCQTLINLINGISFHSSLANHLEDISFWANKFASIQFGFIRRKGNKLAHVLAKYGCTYSTFYSGSGSLPIWLDRYFCNDSN", "length": 484, "header": "tr|Q9SF52-1|Q9SF52_ARATH Isoform 1 of Ribonuclease H-like superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9SF52-1" }, "isoforms": [ { "isoform_ac": "Q9SF52-1", "url": "https://www.uniprot.org/uniprotkb/Q9SF52/entry", "sequence": { "sequence": "MKARYFKDVSILDAKVRKQQSYGWASLLDGIALLKKGTRHLIGDGQNIRIGLDNIVDSHPPRPLNTEETYKEMTINNLFERKGSYYFWDDSKISQFVDQSDHGFIHRIYLAKSKKPDKIIWNYNTTGEYTVRSGYWLLTHDPSTNIPAINPPHGSIDLKTRIWNLPIMPKLKHFLWRALSQALATTERLTTRGMRIDPSCPRCHRENESINHALFTCPFATMAWRLSDSSLIRNQLMSNDFEENISNILNFVQDTTMSDFHKLLPVWLIWRIWKARNNVVFNKFRESPSKTVLSAKAETHDWLNATQSHKKTPSPTRQIAENKIEWRNPPATYVKCNFDAGFDVQKLEATGGWIIRNHYGTPISWGSMKLAHTSNPLEAETKALLAALQQTWIRGYTQVFMEGDCQTLINLINGISFHSSLANHLEDISFWANKFASIQFGFIRRKGNKLAHVLAKYGCTYSTFYSGSGSLPIWLDRYFCNDSN", "length": 484, "header": "tr|Q9SF52-1|Q9SF52_ARATH Isoform 1 of Ribonuclease H-like superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9SF52-1" }, "locus": { "chromosome": "3", "start_pos": 2921804, "end_pos": 2923258, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G09510.1", "url": "https://www.ensemblgenomes.org/id/AT3G09510.1" }, { "database": "Ensembl Peptide", "id": "AT3G09510.1", "url": "https://www.ensemblgenomes.org/id/AT3G09510.1" } ] } } ], 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Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9SF52", "url": "https://www.uniprot.org/uniprotkb/Q9SF52" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9SF52", "url": "https://www.uniprot.org/uniprotkb/Q9SF52" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G09510", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G09510", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 3, "go_terms": [ { "name": "RNA-directed DNA polymerase activity", "id": "GO:0003964", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003964", "evidence": [ { "database": "UniProtKB", "id": "Q9SF52", "url": "https://www.uniprot.org/uniprotkb/Q9SF52" } ], "pmid": "" }, { "name": "nucleic acid binding", "id": "GO:0003676", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003676", "evidence": [ { "database": "UniProtKB", "id": "Q9SF52", "url": "https://www.uniprot.org/uniprotkb/Q9SF52" } ], "pmid": "" }, { "name": "RNA-DNA hybrid ribonuclease activity", "id": "GO:0004523", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004523", "evidence": [ { "database": "UniProtKB", "id": "Q9SF52", "url": "https://www.uniprot.org/uniprotkb/Q9SF52" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 124, "end_pos": 126, "annotation": "n_glycosylation_sequon" }, { "start_pos": 207, "end_pos": 209, "annotation": "n_glycosylation_sequon" }, { "start_pos": 244, "end_pos": 246, "annotation": "n_glycosylation_sequon" }, { "start_pos": 304, "end_pos": 306, "annotation": "n_glycosylation_sequon" }, { "start_pos": 481, "end_pos": 483, "annotation": "n_glycosylation_sequon" } ], 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"end_aa": "Trp", "glycosite_overlap": [] } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 124, "end_pos": 126 }, { "start_pos": 207, "end_pos": 209 }, { "start_pos": 244, "end_pos": 246 }, { "start_pos": 304, "end_pos": 306 }, { "start_pos": 481, "end_pos": 483 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { 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"count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "Q9SF87-1", "uniprot_ac": "Q9SF87", "uniprot_id": "Q9SF87_ARATH", "mass": { "chemical_mass": 84222.0, "monoisotopic_mass": 84222.0 }, "refseq": { "ac": "NP_566359", "name": "D111/G-patch domain-containing protein", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_566359" }, "gene_names": [], "protein_names": [ { "name": "D111/G-patch domain-containing protein", "type": "synonym", "evidence": [ { "id": "NP_566359", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_566359" }, { "id": "Q9SF87", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SF87/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9SF87", "url": "https://www.uniprot.org/uniprotkb/Q9SF87" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9SF87", "locus": {} } ], "crossref": [ { "id": "820143", "url": "https://www.ncbi.nlm.nih.gov/gene/820143", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR000467", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000467", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT3G09850", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G09850", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "TFEMHTK", "url": "https://omabrowser.org/oma/group/TFEMHTK/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "Q9SF87", "url": "https://www.orthodb.org/?gene=Q9SF87", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR47423", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR47423", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR47423:SF2", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR47423:SF2", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF01585", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF01585", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_566359", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_566359", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G09850", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G09850", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9SF87", "url": "https://www.uniprot.org/uniprotkb/Q9SF87", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9SF87-1", "url": "https://www.uniprot.org/uniprotkb/Q9SF87-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MRGGGRRRSNGGGSSGKNKAKSPGQSTRTNHNSAAGSSSGGRHRRQNNTTLFVEGGILSDYRKDPNFSTPSRGGSSSGKGLRSRSIERVKASASTSGPRKCSGNTYVYQYPSIDFEEGLDRRSGVESDQMNESPLVLGKSEATQIVAFLDQTPSSSKGIKVSYDYEYEPSYVLGDDSHKGLGFCDDSDATPSGSLSIPKALGDQGGSFSHEEEGDAVDESGGNDDELMPDVVKTPKRRNSGFISIGGMKLYTEDVSGEESDGEEEMNDDDDDESGDEGSSGSSELSESDSSEDMFGSYSEIDDDVAKDYLEGIGGSEIMLDAHWLAEQSLDKLDLSSDDSSSSDSSDRKTRKLTGIRLQKASMEYGKKKTTRSGYSGHGKSTNPLAMDDLMFVKDPRSLSGKKNKKKEVAKFPQSWPSRAPKSKNSRSFPGENKKHRKEYIALKRRERMLQRGVDLADINSQLENFVLENVDMHCFQRMHNRDCSQVRRLADVYRLSSSCNGSGKKSFVTVTRTYQTCMPSASDKLRIEKLIGAGDEDCDFAVSGGVKGKSGSLDRKKAKDSAKKRPTREERERNKSNGKKSSYADQPVSFVSSGIIDSEIAVAKTSVEKVAKEVAETTPGTSNGADIGAFEVHTRGFGSKMMAKMGFIDGGGLGKDGKGIAQPIEAVQRPKSLGLGLDFSIDTEDPSPSSNNNNNAKRNRSSSSGKHGKRITHDNGASGSGRIRDKRLGAFEQHTTGFGSRMMARMGFVEGSGLGRESQGIVNPLVAVRRPRARGIGAEG", "length": 781, "header": "tr|Q9SF87-1|Q9SF87_ARATH Isoform 1 of D111/G-patch domain-containing protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SF87-1" }, "isoforms": [ { "isoform_ac": "Q9SF87-1", "url": "https://www.uniprot.org/uniprotkb/Q9SF87/entry", "sequence": { "sequence": "MRGGGRRRSNGGGSSGKNKAKSPGQSTRTNHNSAAGSSSGGRHRRQNNTTLFVEGGILSDYRKDPNFSTPSRGGSSSGKGLRSRSIERVKASASTSGPRKCSGNTYVYQYPSIDFEEGLDRRSGVESDQMNESPLVLGKSEATQIVAFLDQTPSSSKGIKVSYDYEYEPSYVLGDDSHKGLGFCDDSDATPSGSLSIPKALGDQGGSFSHEEEGDAVDESGGNDDELMPDVVKTPKRRNSGFISIGGMKLYTEDVSGEESDGEEEMNDDDDDESGDEGSSGSSELSESDSSEDMFGSYSEIDDDVAKDYLEGIGGSEIMLDAHWLAEQSLDKLDLSSDDSSSSDSSDRKTRKLTGIRLQKASMEYGKKKTTRSGYSGHGKSTNPLAMDDLMFVKDPRSLSGKKNKKKEVAKFPQSWPSRAPKSKNSRSFPGENKKHRKEYIALKRRERMLQRGVDLADINSQLENFVLENVDMHCFQRMHNRDCSQVRRLADVYRLSSSCNGSGKKSFVTVTRTYQTCMPSASDKLRIEKLIGAGDEDCDFAVSGGVKGKSGSLDRKKAKDSAKKRPTREERERNKSNGKKSSYADQPVSFVSSGIIDSEIAVAKTSVEKVAKEVAETTPGTSNGADIGAFEVHTRGFGSKMMAKMGFIDGGGLGKDGKGIAQPIEAVQRPKSLGLGLDFSIDTEDPSPSSNNNNNAKRNRSSSSGKHGKRITHDNGASGSGRIRDKRLGAFEQHTTGFGSRMMARMGFVEGSGLGRESQGIVNPLVAVRRPRARGIGAEG", "length": 781, "header": "tr|Q9SF87-1|Q9SF87_ARATH Isoform 1 of D111/G-patch domain-containing protein OS=Arabidopsis thaliana 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"glytoucan_ac": "", "type": "O-linked", "subtype": "other", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 69, "start_aa": "Thr", "end_pos": 69, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr69", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ], "filter_code": "000000000000000010000.00000000001000.0.01000" } ], "phosphorylation": [ { "start_pos": 187, "end_pos": 187, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SF87", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SF87" }, { "database": "PubMed", "id": "18463617", "url": "https://glygen.org/publication/PubMed/18463617" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ], "site_lbl": "Ser187" }, { "start_pos": 22, "end_pos": 22, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SF87", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SF87" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ], "site_lbl": "Ser22" }, { "start_pos": 240, "end_pos": 240, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SF87", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SF87" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ], "site_lbl": "Ser240" }, { "start_pos": 244, "end_pos": 244, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SF87", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SF87" } ], "site_lbl": "Ser244" }, { "start_pos": 415, "end_pos": 415, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SF87", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SF87" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ], "site_lbl": "Ser415" } ], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9SF87", "url": "https://www.uniprot.org/uniprotkb/Q9SF87" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Large-scale phosphorylation mapping reveals the extent of tyrosine phosphorylation in Arabidopsis.", "journal": "Molecular systems biology", "date": "2008", "authors": "Sugiyama Naoyuki, Nakagami Hirofumi, Mochida Keiichi, Daudi Arsalan, Tomita Masaru, Shirasu Ken, Ishihama Yasushi", "evidence": [ { "database": "iPTMnet", "id": "Q9SF87", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SF87" } ], "reference": [ { "type": "PubMed", "id": "18463617", "url": "https://glygen.org/publication/PubMed/18463617" } ] }, { "title": "Large-scale comparative phosphoproteomics identifies conserved phosphorylation sites in plants.", "journal": "Plant physiology", "date": "2010-07", "authors": "Nakagami Hirofumi, Sugiyama Naoyuki, Mochida Keiichi, Daudi Arsalan, Yoshida Yuko, Toyoda Tetsuro, Tomita Masaru, Ishihama Yasushi, Shirasu Ken", "evidence": [ { "database": "iPTMnet", "id": "Q9SF87", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SF87" } ], "reference": [ { "type": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" } ] }, { "title": "Quantitative phosphoproteomics identifies SnRK2 protein kinase substrates and reveals the effectors of abscisic acid action.", "journal": "Proceedings of the National Academy of Sciences of the United States of America", "date": "2013-07-02", "authors": "Wang Pengcheng, Xue Liang, Batelli Giorgia, Lee Shinyoung, Hou Yueh-Ju, Van Oosten Michael J, Zhang Huiming, Tao W Andy, Zhu Jian-Kang", "evidence": [ { "database": "iPTMnet", "id": "Q9SF87", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SF87" } ], "reference": [ { "type": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" } ] }, { "title": "Quantitative phosphoproteomics of the ataxia telangiectasia-mutated (ATM) and ataxia telangiectasia-mutated and rad3-related (ATR) dependent DNA damage response in Arabidopsis thaliana.", "journal": "Molecular & cellular proteomics : MCP", "date": "2015-03", "authors": "Roitinger Elisabeth, Hofer Manuel, K\u00f6cher Thomas, Pichler Peter, Novatchkova Maria, Yang Jianhua, Schl\u00f6gelhofer Peter, Mechtler Karl", "evidence": [ { "database": 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Van De Slijke Eveline, Van de Cotte Brigitte, Stes Elisabeth, Van Bel Michiel, Storme Veronique, Impens Francis, Gevaert Kris, Vandepoele Klaas, De Smet Ive, De Jaeger Geert", "evidence": [ { "database": "iPTMnet", "id": "Q9SF87", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SF87" } ], "reference": [ { "type": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ], "pathway": [ { "id": "ath:AT3G09850", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G09850", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q9SF87", "url": "https://www.uniprot.org/uniprotkb/Q9SF87" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "nucleic acid binding", 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Classification" ] }, { "id": "PTHR28525", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR28525", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR28525:SF1", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR28525:SF1", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF10247", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF10247", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_566324", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_566324", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G07910", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G07910", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9SFC3", "url": "https://www.uniprot.org/uniprotkb/Q9SFC3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9SFC3-1", "url": 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Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9SFC3", "url": 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"MASEKSFKKRKITDDVDGVGVGGGLESLPEDIIADIFSRLPISSIARLMFVCRSWRSVLTQHGRLSSSSSSPTKPCLLLHCDSPIRNGLHFLDLSEEEKRIKTKKFTLRFASSMPEFDVVGSCNGLLCLSDSLYNDSLYLYNPFTTNSLELPECSNKYHDQELVFGFGFHEMTKEYKVLKIVYFRGSSSNNNGIYRGRGRIQYKQSEVQILTLSSKTTDQSLSWRSLGKAPYKFVKRSSEALVNGRLHFVTRPRRHVPDRKFVSFDLEDEEFKEIPKPDCGGLNRTNHRLVNLKGCLCAVVYGNYGKLDIWVMKTYGVKESWGKEYSIGTYLPKGLKQNLDRPMWIWKNAENGKVVRVLCLLENGEILLEYKSRVLVAYDPKLGKFKDLLFHGLPNWFHTVVHAGTLSWFDTPLDLW", "length": 417, "header": "sp|Q9SFC7-1|FB135_ARATH Isoform 1 of F-box protein At3g07870 OS=Arabidopsis thaliana OX=3702 GN= PE=2 SV=1 CANONICAL=Q9SFC7-1" }, "isoforms": [ { "isoform_ac": "Q9SFC7-1", "url": "https://www.uniprot.org/uniprotkb/Q9SFC7/entry#Q9SFC7-1", "sequence": { "sequence": "MASEKSFKKRKITDDVDGVGVGGGLESLPEDIIADIFSRLPISSIARLMFVCRSWRSVLTQHGRLSSSSSSPTKPCLLLHCDSPIRNGLHFLDLSEEEKRIKTKKFTLRFASSMPEFDVVGSCNGLLCLSDSLYNDSLYLYNPFTTNSLELPECSNKYHDQELVFGFGFHEMTKEYKVLKIVYFRGSSSNNNGIYRGRGRIQYKQSEVQILTLSSKTTDQSLSWRSLGKAPYKFVKRSSEALVNGRLHFVTRPRRHVPDRKFVSFDLEDEEFKEIPKPDCGGLNRTNHRLVNLKGCLCAVVYGNYGKLDIWVMKTYGVKESWGKEYSIGTYLPKGLKQNLDRPMWIWKNAENGKVVRVLCLLENGEILLEYKSRVLVAYDPKLGKFKDLLFHGLPNWFHTVVHAGTLSWFDTPLDLW", "length": 417, "header": "sp|Q9SFC7-1|FB135_ARATH Isoform 1 of F-box protein At3g07870 OS=Arabidopsis thaliana OX=3702 GN= PE=2 SV=1 CANONICAL=Q9SFC7-1" }, "locus": { "chromosome": "3", "start_pos": 2510570, "end_pos": 2512479, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G07870.1", "url": "https://www.ensemblgenomes.org/id/AT3G07870.1" }, { "database": "Ensembl Peptide", "id": "AT3G07870.1", "url": "https://www.ensemblgenomes.org/id/AT3G07870.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9SFC7", "url": "https://www.uniprot.org/uniprotkb/Q9SFC7" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Empirical analysis of transcriptional activity in the Arabidopsis genome.", "journal": "Science", "date": "2003", "authors": "Yamada Kayoko, Lim Jun, Dale Joseph M, Chen Huaming, Shinn Paul, Palm Curtis J, Southwick Audrey M, Wu Hank C, Kim Christopher, Nguyen Michelle, Pham Paul, Cheuk Rosa, Karlin-Newmann George, Liu Shirley X, Lam Bao, Sakano Hitomi, Wu Troy, Yu Guixia, Miranda Molly, Quach Hong L, Tripp Matthew, Chang Charlie H, Lee Jeong M, Toriumi Mitsue, Chan Marie M H, Tang Carolyn C, Onodera Courtney S, Deng Justine M, Akiyama Kenji, Ansari Yasser, Arakawa Takahiro, Banh Jenny, Banno Fumika, Bowser Leah, Brooks Shelise, Carninci Piero, Chao Qimin, Choy Nathan, Enju Akiko, Goldsmith Andrew D, Gurjal Mani, Hansen Nancy F, Hayashizaki Yoshihide, Johnson-Hopson Chanda, Hsuan Vickie W, Iida Kei, Karnes Meagan, Khan Shehnaz, Koesema Eric, Ishida Junko, Jiang Paul X, Jones Ted, Kawai Jun, Kamiya Asako, Meyers Cristina, Nakajima Maiko, Narusaka Mari, Seki Motoaki, Sakurai Tetsuya, Satou Masakazu, Tamse Racquel, Vaysberg Maria, Wallender Erika K, Wong Cecilia, Yamamura Yuki, Yuan Shiaulou, Shinozaki Kazuo, Davis Ronald W, Theologis Athanasios, Ecker Joseph R", "evidence": [ { "database": "UniProtKB", "id": "Q9SFC7", "url": "https://www.uniprot.org/uniprotkb/Q9SFC7" } ], "reference": [ { "type": "PubMed", "id": "14593172", "url": "https://glygen.org/publication/PubMed/14593172" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9SFC7", "url": "https://www.uniprot.org/uniprotkb/Q9SFC7" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G07870", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G07870", "resource": "KEGG 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Liu Z A, Luros J S, Maiti R, Marziali A, Militscher J, Miranda M, Nguyen M, Nierman W C, Osborne B I, Pai G, Peterson J, Pham P K, Rizzo M, Rooney T, Rowley D, Sakano H, Salzberg S L, Schwartz J R, Shinn P, Southwick A M, Sun H, Tallon L J, Tambunga G, Toriumi M J, Town C D, Utterback T, Van Aken S, Vaysberg M, Vysotskaia V S, Walker M, Wu D, Yu G, Fraser C M, Venter J C, Davis R W", "evidence": [ { "database": "UniProtKB", "id": "Q9SFD9", "url": "https://www.uniprot.org/uniprotkb/Q9SFD9" } ], "reference": [ { "type": "PubMed", "id": "11130712", "url": "https://glygen.org/publication/PubMed/11130712" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9SFD9", "url": "https://www.uniprot.org/uniprotkb/Q9SFD9" } ], "reference": 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"tr|Q9SFF1-1|Q9SFF1_ARATH Isoform 1 of SKU5 similar 7 OS=Arabidopsis thaliana OX=3702 GN=SKS7 PE=3 SV=1 CANONICAL=Q9SFF1-1" }, "isoforms": [ { "isoform_ac": "Q9SFF1-1", "url": "https://www.uniprot.org/uniprotkb/Q9SFF1/entry", "sequence": { "sequence": "MKVKSMNTRAMITTLLFLISLAFAEDPYRFFEWHVTYGNISPLGVAQQGILINGKFPGPDIISITNDNLIINVFNHLDEPFLLSWNGIRNWKNSFQDGVYGTMCPIPPGKNYTYALQVKDQIGSFYYFPSLGFHKAAGGFGGIRISSRALIPVPFPTPADDYTLLVGDWYKTNHKDLKAQLDNGGKLPLPDGILINGRSSGATLNIEPGKTYRLRISNVGLQNSLNFRIQNHTMKLVEVEGRYTIQNLFSSLDVHVGQSYSVLITADQPAKDYYVVVSSRFTSKILTTTGVLHYSNSVAPVSGPIPDGPIKLSWSFNQARAIRTNLTASGPRPNPQGSYRYGVINITRTIRLANNLGHIEGKQRYAVNSASFYPADTPLKLVDYFKIDGVYKPGSISDQPTNGAIFPTTSVMQADFRAFVEVIFENSEDIVQSWHLDGYSFYVVGMELGKWSPASRKVYNLNDAILRCTIQVYPRSWTAIYIALDNVGMWNMRSEIWERQYLGQQFYMRVYTTSTSLRDEYLIPKNALLCGRASSSHR", "length": 538, "header": "tr|Q9SFF1-1|Q9SFF1_ARATH Isoform 1 of SKU5 similar 7 OS=Arabidopsis thaliana OX=3702 GN=SKS7 PE=3 SV=1 CANONICAL=Q9SFF1-1" }, "locus": { "chromosome": "1", "start_pos": 7671028, "end_pos": 7674215, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT1G21860.1", "url": "https://www.ensemblgenomes.org/id/AT1G21860.1" }, { "database": "Ensembl Peptide", "id": "AT1G21860.1", "url": "https://www.ensemblgenomes.org/id/AT1G21860.1" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "other", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 157, "start_aa": "Thr", "end_pos": 157, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr157", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ], "filter_code": "000000000000000010000.00000000001000.0.01000" } ], "phosphorylation": [ { "start_pos": 341, "end_pos": 341, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Tyr", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SFF1", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SFF1" } ], "site_lbl": "Tyr341" } ], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Theologis A, Ecker J R, Palm C J, Federspiel N A, Kaul S, White O, Alonso J, Altafi H, Araujo R, Bowman C L, Brooks S Y, Buehler E, Chan A, Chao Q, Chen H, Cheuk R F, Chin C W, Chung M K, Conn L, Conway A B, Conway A R, Creasy T H, Dewar K, Dunn P, Etgu P, Feldblyum T V, Feng J, Fong B, Fujii C Y, Gill J E, Goldsmith A D, Haas B, Hansen N F, Hughes B, Huizar L, Hunter J L, Jenkins J, Johnson-Hopson C, Khan S, Khaykin E, Kim C J, Koo H L, Kremenetskaia I, Kurtz D B, Kwan A, Lam B, Langin-Hooper S, Lee A, Lee J M, Lenz C A, Li J H, Li Y, Lin X, Liu S X, Liu Z A, Luros J S, Maiti R, Marziali A, Militscher J, Miranda M, Nguyen M, Nierman W C, Osborne B I, Pai G, Peterson J, Pham P K, Rizzo M, Rooney T, Rowley D, Sakano H, Salzberg S L, Schwartz J R, Shinn P, Southwick A M, Sun H, Tallon L J, Tambunga G, Toriumi M J, Town C D, Utterback T, Van Aken S, Vaysberg M, Vysotskaia V S, Walker M, Wu D, Yu G, Fraser C M, Venter J C, Davis R W", "evidence": [ { "database": "UniProtKB", "id": "Q9SFF1", "url": "https://www.uniprot.org/uniprotkb/Q9SFF1" } ], "reference": [ { "type": "PubMed", "id": "11130712", "url": "https://glygen.org/publication/PubMed/11130712" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9SFF1", "url": "https://www.uniprot.org/uniprotkb/Q9SFF1" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT1G21860", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT1G21860", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "extracellular region", "id": "GO:0005576", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005576", "evidence": [ { "database": "UniProtKB", "id": "Q9SFF1", "url": "https://www.uniprot.org/uniprotkb/Q9SFF1" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "oxidoreductase activity", "id": "GO:0016491", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016491", "evidence": [ { "database": "UniProtKB", "id": "Q9SFF1", "url": "https://www.uniprot.org/uniprotkb/Q9SFF1" } ], "pmid": "" }, { "name": "copper ion binding", "id": "GO:0005507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005507", "evidence": [ { "database": "UniProtKB", "id": "Q9SFF1", "url": "https://www.uniprot.org/uniprotkb/Q9SFF1" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 111, "end_pos": 113, "annotation": "n_glycosylation_sequon" }, { "start_pos": 231, "end_pos": 233, "annotation": "n_glycosylation_sequon" }, { "start_pos": 325, "end_pos": 327, "annotation": "n_glycosylation_sequon" }, { "start_pos": 345, "end_pos": 347, "annotation": "n_glycosylation_sequon" }, { "start_pos": 39, "end_pos": 41, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "Q9SFF1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SFF1" }, { "id": "PF07732", "database": "Pfam", "url": 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"kinase_uniprot_canonical_ac", "kinase_gene_name", "residue", "comment", "site_lbl" ] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "Q9SFF2-1", "uniprot_ac": "Q9SFF2", "uniprot_id": "Q9SFF2_ARATH", "mass": { "chemical_mass": 61376.0, "monoisotopic_mass": 61376.0 }, "refseq": { "ac": "NP_173603", "name": "SKU5 similar 8", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_173603" }, 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Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9SFG2", "url": "https://www.uniprot.org/uniprotkb/Q9SFG2" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9SFG2", "url": "https://www.uniprot.org/uniprotkb/Q9SFG2" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G05980", "name": "", "url": 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"A0A1I9LQ51", "url": "https://www.orthodb.org/?gene=A0A1I9LQ51", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "Q9LYL8", "url": "https://www.orthodb.org/?gene=Q9LYL8", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR35740", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR35740", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR35740:SF1", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR35740:SF1", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF25220", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF25220", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PR:Q9LYL8", "url": "https://proconsortium.org/cgi-bin/entry_pro?id=PR:Q9LYL8", "database": "PRO", "categories": [ "Protein" ] }, { "id": "NP_191184", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_191184", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G56250", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G56250", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "A0A1I9LQ50", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LQ50", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A1I9LQ50-1", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LQ50-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A1I9LQ51", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LQ51", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A1I9LQ51-1", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LQ51-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9LYL8", "url": "https://www.uniprot.org/uniprotkb/Q9LYL8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9LYL8-1", "url": "https://www.uniprot.org/uniprotkb/Q9LYL8-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9LYL8-2", "url": "https://www.uniprot.org/uniprotkb/Q9LYL8-2", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MEAPRSVGGRIQRKPLADCTNTVSRSSQQSSSSVKFANPSLTSSLKRLVEQTTLKEKPKDVNTSATAPEIASRPITTDVRPVTRRMSADLASPASAPSRPQTSRSDMGVSDKDFTEPWSVYTVRRKASGQKRSKDASSSTSAAARIRLDLSSSSGKKTRQASENKKKTLKVAPKKRQRTVKQEKEDPVSAACQDYIEKQKAYFAEIDAFELPVEEVSNSDSD", "length": 222, "header": "sp|Q9LYL8-1|SORIN_ARATH Isoform 1 of Sororin-like protein OS=Arabidopsis thaliana OX=3702 GN=SORORIN PE=3 SV=1 CANONICAL=Q9LYL8-1" }, "isoforms": [ { "isoform_ac": "A0A1I9LQ50-1", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LQ50/entry", "sequence": { "sequence": "MNHPKIPTPGKQMEAPRSVGGRIQRKPLADCTNTVSRSSQQSSSSVKFANPSLTSSLKRLVEQTTLKEKPKDVNTSATAPEIASRPITTDVRPVTRRMSADLASPASAPSRPQTSRSDMGVSDKDFTEPWSVYTVRRKASGQKRSKDASSSTSAAARIRLDLSSSSGKKTRQASENKKKTLKVAPKKRQRTVKQEKEDPVSAACQDYIEKQKAYFAEIDAFELPVEEWENVLGST", "length": 235, "header": "tr|A0A1I9LQ50-1|A0A1I9LQ50_ARATH Computationally mapped isoform of Sororin C-terminal region domain-containing protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LYL8-1" }, "locus": { "chromosome": "3", "start_pos": 20866008, "end_pos": 20868044, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G56250.4", "url": "https://www.ensemblgenomes.org/id/AT3G56250.4" }, { "database": "Ensembl Peptide", "id": "AT3G56250.4", "url": "https://www.ensemblgenomes.org/id/AT3G56250.4" } ] } }, { "isoform_ac": "A0A1I9LQ51-1", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LQ51/entry", "sequence": { "sequence": "MNHPKIPTPGKQMEAPRSVGGRIQRKPLADCTNTVSRSSQQSSSSVKFANPSLTSSLKRLVEQTTLKEKPKDVNTSATAPEIASRPITTDVRPVTRRMSADLASPASAPSRPQTSRSDMGVSDKDFTEPWSVYTVRRKASGQKRSKDASSSTSAAARIRLDLSSSSGKKTRQASENKKKTLKVAPKKRQRTVKQEKEDPVSAACQDYIEKQKAYFAEIDAFELPVEEVRPRLRDKLYTYIHTPITITLSVQ", "length": 251, "header": "tr|A0A1I9LQ51-1|A0A1I9LQ51_ARATH Computationally mapped isoform of Sororin C-terminal region domain-containing protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9LYL8-1" }, "locus": { "chromosome": "3", "start_pos": 20866003, "end_pos": 20868156, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G56250.3", "url": "https://www.ensemblgenomes.org/id/AT3G56250.3" }, { "database": "Ensembl Peptide", "id": "AT3G56250.3", "url": "https://www.ensemblgenomes.org/id/AT3G56250.3" } ] } }, { "isoform_ac": "Q9LYL8-1", "url": "https://www.uniprot.org/uniprotkb/Q9LYL8/entry#Q9LYL8-1", "sequence": { "sequence": "MEAPRSVGGRIQRKPLADCTNTVSRSSQQSSSSVKFANPSLTSSLKRLVEQTTLKEKPKDVNTSATAPEIASRPITTDVRPVTRRMSADLASPASAPSRPQTSRSDMGVSDKDFTEPWSVYTVRRKASGQKRSKDASSSTSAAARIRLDLSSSSGKKTRQASENKKKTLKVAPKKRQRTVKQEKEDPVSAACQDYIEKQKAYFAEIDAFELPVEEVSNSDSD", "length": 222, "header": "sp|Q9LYL8-1|SORIN_ARATH Isoform 1 of Sororin-like protein OS=Arabidopsis thaliana OX=3702 GN=SORORIN PE=3 SV=1 CANONICAL=Q9LYL8-1" }, "locus": { "chromosome": "3", "start_pos": 20866120, "end_pos": 20867840, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G56250.1", "url": "https://www.ensemblgenomes.org/id/AT3G56250.1" }, { "database": "Ensembl Peptide", "id": "AT3G56250.1", "url": "https://www.ensemblgenomes.org/id/AT3G56250.1" } ] } }, { "isoform_ac": "Q9LYL8-2", "url": "https://www.uniprot.org/uniprotkb/Q9LYL8/entry#Q9LYL8-2", "sequence": { "sequence": "MNHPKIPTPGKQMEAPRSVGGRIQRKPLADCTNTVSRSSQQSSSSVKFANPSLTSSLKRLVEQTTLKEKPKDVNTSATAPEIASRPITTDVRPVTRRMSADLASPASAPSRPQTSRSDMGVSDKDFTEPWSVYTVRRKASGQKRSKDASSSTSAAARIRLDLSSSSGKKTRQASENKKKTLKVAPKKRQRTVKQEKEDPVSAACQDYIEKQKAYFAEIDAFELPVEEVSNSDSD", "length": 234, "header": "sp|Q9LYL8-2|SORIN_ARATH Isoform 2 of Sororin-like protein OS=Arabidopsis thaliana OX=3702 GN=SORORIN PE=3 SV=1 CANONICAL=Q9LYL8-1" }, "locus": {} } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9LYL8", "url": "https://www.uniprot.org/uniprotkb/Q9LYL8" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9LYL8", "url": "https://www.uniprot.org/uniprotkb/Q9LYL8" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] }, { "title": "Sororin is an evolutionary conserved antagonist of WAPL.", "journal": "Nature communications", "date": "2024-06-03", "authors": "Prus\u00e9n Mota Ignacio, Galova Marta, Schleiffer Alexander, Nguyen Tan-Trung, Kovacikova Ines, Farias Saad Carolina, Litos Gabriele, Nishiyama Tomoko, Gregan Juraj, Peters Jan-Michael, Schl\u00f6gelhofer Peter", "evidence": [ { "database": "UniProtKB", "id": "Q9LYL8", "url": "https://www.uniprot.org/uniprotkb/Q9LYL8" } ], "reference": [ { "type": "PubMed", "id": "38830897", "url": "https://glygen.org/publication/PubMed/38830897" } ] } ], "pathway": [ { "id": "ath:AT3G56250", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G56250", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q9LYL8", "url": "https://www.uniprot.org/uniprotkb/Q9LYL8" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 4, "go_terms": [ { "name": "cell division", "id": "GO:0051301", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0051301", "evidence": [ { "database": "UniProtKB", "id": "Q9LYL8", "url": "https://www.uniprot.org/uniprotkb/Q9LYL8" } ], "pmid": "" }, { "name": "mitotic sister chromatid cohesion", "id": "GO:0007064", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007064", "evidence": [ { "database": "UniProtKB", "id": "Q9LYL8", "url": "https://www.uniprot.org/uniprotkb/Q9LYL8" } ], "pmid": "" }, { "name": "regulation of sister chromatid cohesion", "id": "GO:0007063", "url": 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"lectin_list": [], "domain_list": [ { "evidence": [ { "id": "Q9LYL8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LYL8" }, { "id": "PRU00768", "database": "PROSITE", "url": "https://prosite.expasy.org/PRU00768" } ], "ann_type": "Motif_Annotation", "uniprotkb_annotation": "Nuclear localization signal", "eco_id": "ECO_0000255", "start_pos": 155, "end_pos": 162, "start_aa": "Gly", "end_aa": "Ser", "glycosite_overlap": [] } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 62, "end_pos": 64 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", 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"uniprot_ac": "Q9M265", "uniprot_id": "Q9M265_ARATH", "mass": { "chemical_mass": 30872.0, "monoisotopic_mass": 30872.0 }, "refseq": { "ac": "NP_191759", "name": "S-adenosyl-L-methionine-dependent methyltransferases superfamily protein", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_191759" }, "gene_names": [], "protein_names": [ { "name": "S-adenosyl-L-methionine-dependent methyltransferases superfamily protein", "type": "synonym", "evidence": [ { "id": "NP_191759", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_191759" }, { "id": "Q9M265", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9M265/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9M265", "url": "https://www.uniprot.org/uniprotkb/Q9M265" } ], "common_name": 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"https://www.genome.jp/dbget-bin/www_bget?ath:AT3G62000", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "VCFEGVF", "url": "https://omabrowser.org/oma/group/VCFEGVF/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "F4IX20", "url": "https://www.orthodb.org/?gene=F4IX20", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "Q9M265", "url": "https://www.orthodb.org/?gene=Q9M265", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR10509", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR10509", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR10509:SF14", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR10509:SF14", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF01596", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF01596", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_191759", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_191759", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G62000", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G62000", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "F4IX20", "url": "https://www.uniprot.org/uniprotkb/F4IX20", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F4IX20-1", "url": "https://www.uniprot.org/uniprotkb/F4IX20-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9M265", "url": "https://www.uniprot.org/uniprotkb/Q9M265", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9M265-1", "url": "https://www.uniprot.org/uniprotkb/Q9M265-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MSTGLALNRCSVSVCRTAVTLLNRPTVSVARSLKFSRRLIGNCSIAPADPYVVADDDKYGNKQVISLTPRLYDYVLSNVREPKILRQLREETSKMRGSQMQVSPDQAQLLAMLVQMLAAERCIEVGVYTGYSSLAVALVLPESGCLVACERDSNSLEVAKRYYELAGVSHKVNVKQGLAAESLKSMIQNGEGASYDFAFVDADKRMYQDYFELLLQLVRVGGVIVMDNVLWHGRVSDPMVNDAKTISIRNFNKKLMDDKRVSISMVPIGDGMTICRKR", "length": 278, "header": "tr|Q9M265-1|Q9M265_ARATH Isoform 1 of S-adenosyl-L-methionine-dependent methyltransferases superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9M265-1" }, "isoforms": [ { "isoform_ac": "F4IX20-1", "url": "https://www.uniprot.org/uniprotkb/F4IX20/entry", "sequence": { "sequence": "MSTGLALNRCSVSVCRTAVTLLNRPTVSVARSLKFSRRLIGNCSIAPADPYVVADDDKYGNKQVISLTPRLYDYVLSNVREPKILRQLREETSKMRGSQMQVSPDQAQLLAMLVQMLAAERCIEVGVYTGYSSLAVALVLPESGCLVACERDSNSLEVAKRYYELAGVSHKVNVKQGLAAESLKSMIQNGEGASYDFAFVDADKRMYQDYFELLLQLVRVGGVIVMDNVLWHGRVSDPMVNDAKTISIRNFNKKLMDDKRVSISMVSTDRRWHDDMPQEIVIRKNQLGHSEPDPREKSFKHERISMKPRYTCFRIGNHFFCSESILTNTSKTHLLGMVTTNACTFVKLFNSF", "length": 352, "header": "tr|F4IX20-1|F4IX20_ARATH Computationally mapped isoform of S-adenosyl-L-methionine-dependent methyltransferases superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9M265-1" }, "locus": { "chromosome": "3", "start_pos": 22959053, "end_pos": 22961321, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G62000.2", "url": "https://www.ensemblgenomes.org/id/AT3G62000.2" }, { "database": "Ensembl Peptide", "id": "AT3G62000.2", "url": "https://www.ensemblgenomes.org/id/AT3G62000.2" } ] } }, { "isoform_ac": "Q9M265-1", "url": "https://www.uniprot.org/uniprotkb/Q9M265/entry", "sequence": { "sequence": "MSTGLALNRCSVSVCRTAVTLLNRPTVSVARSLKFSRRLIGNCSIAPADPYVVADDDKYGNKQVISLTPRLYDYVLSNVREPKILRQLREETSKMRGSQMQVSPDQAQLLAMLVQMLAAERCIEVGVYTGYSSLAVALVLPESGCLVACERDSNSLEVAKRYYELAGVSHKVNVKQGLAAESLKSMIQNGEGASYDFAFVDADKRMYQDYFELLLQLVRVGGVIVMDNVLWHGRVSDPMVNDAKTISIRNFNKKLMDDKRVSISMVPIGDGMTICRKR", "length": 278, "header": "tr|Q9M265-1|Q9M265_ARATH Isoform 1 of S-adenosyl-L-methionine-dependent methyltransferases superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9M265-1" }, "locus": { "chromosome": "3", "start_pos": 22959085, "end_pos": 22961209, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G62000.1", "url": "https://www.ensemblgenomes.org/id/AT3G62000.1" }, { "database": "Ensembl Peptide", "id": "AT3G62000.1", "url": "https://www.ensemblgenomes.org/id/AT3G62000.1" } ] } } ], "glycosylation": [], "phosphorylation": [ { "start_pos": 74, "end_pos": 74, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Tyr", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9M265", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9M265" } ], "site_lbl": "Tyr74" } ], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9M265", "url": "https://www.uniprot.org/uniprotkb/Q9M265" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9M265", "url": "https://www.uniprot.org/uniprotkb/Q9M265" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G62000", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G62000", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A287A5M5-1", "protein_name": "Catechol-O-methyltransferase domain containing 1", "gene_name": "COMTD1", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MTQPVPRLSVPAALALGSAALGAAFASGLFLGRRFPPRRSRQEKRLLPPEDSPLWQYLLSRSLREHPALRSLRLLTLEQPQGDSMMTCEQAQLLANLARLIKAKKALDLGTFTGYSALALALALPPAGRVVTCEVDAGPPELGRPLWRQAEEEHKIDLRLKPALETLDELLAAGEAGTFDVAVVDADKENCTAYYERCLQLLRPGGVLAVLNVLCHGEVLQPQPQDKVVQCVRNLNERILRDARVHISLLPLGDGLTLAFKI", "length": 262 }, "evidence": [ { "id": "Q9M265", "url": "https://omabrowser.org/oma/group/Q9M265/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "Q86IC8-1", "protein_name": "Probable caffeoyl-CoA O-methyltransferase 2", "gene_name": "omt6", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MEQKTAPTQYEVKVQYNNSILNYAIDHSDQLTDIQKELIQFTKENIERHIMLTQAEQCSFFKLLIQVLNAKKTIDIGVFTGLSSLTAALAMGDEGRVVACDVSTEYTQHALKFWAKAGVDHKINLKIQPASKTLQELIDQGEENTYDFVFIDADKTGYDTYYELSLKLIRKGGIIAIDNVLQHGRVADPNANVEPNLVAIRALNDKILADKRVTKSLLPIADGITLITKIN", "length": 231 }, "evidence": [ { "id": "Q9M265", "url": "https://omabrowser.org/oma/group/Q9M265/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q86VU5-1", "protein_name": "Catechol O-methyltransferase domain-containing protein 1", "gene_name": "COMTD1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MTQPVPRLSVPAALALGSAALGAAFATGLFLGRRCPPWRGRREQCLLPPEDSRLWQYLLSRSMREHPALRSLRLLTLEQPQGDSMMTCEQAQLLANLARLIQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETLDELLAAGEAGTFDVAVVDADKENCSAYYERCLQLLRPGGILAVLRVLWRGKVLQPPKGDVAAECVRNLNERIRRDVRVYISLLPLGDGLTLAFKI", "length": 262 }, "evidence": [ { "id": "Q9M265", "url": "https://omabrowser.org/oma/group/Q9M265/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "Q9M265", "url": "https://www.uniprot.org/uniprotkb/Q9M265" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "S-adenosylmethionine-dependent methyltransferase activity", "id": "GO:0008757", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008757", "evidence": [ { "database": "UniProtKB", "id": "Q9M265", "url": "https://www.uniprot.org/uniprotkb/Q9M265" } ], "pmid": "" }, { "name": "O-methyltransferase activity", "id": "GO:0008171", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008171", "evidence": [ { "database": "UniProtKB", "id": "Q9M265", "url": "https://www.uniprot.org/uniprotkb/Q9M265" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "methylation", "id": "GO:0032259", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0032259", "evidence": [ { "database": "UniProtKB", "id": "Q9M265", "url": "https://www.uniprot.org/uniprotkb/Q9M265" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 42, "end_pos": 44, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [ 74 ], "sequon_annotation_sites": [ { "start_pos": 42, "end_pos": 44 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 } ], "sort_fields": [ "start_pos", "end_pos", "kinase_uniprot_canonical_ac", "kinase_gene_name", "residue", "comment", "site_lbl" ] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "Q9SF20-1", "uniprot_ac": "Q9SF20", "uniprot_id": "Q9SF20_ARATH", "mass": { "chemical_mass": 16805.0, "monoisotopic_mass": 16805.0 }, "refseq": { "ac": "NP_566400", "name": "MD-2-related lipid recognition domain-containing protein / ML domain-containing protein", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_566400" }, "gene_names": [], "protein_names": [ { "name": "MD-2-related lipid recognition domain-containing protein / ML domain-containing protein", "type": "synonym", "evidence": [ { "id": "NP_566400", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_566400" }, { "id": "Q9SF20", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SF20/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9SF20", "url": "https://www.uniprot.org/uniprotkb/Q9SF20" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9SF20", "locus": {} } ], "crossref": [ { "id": "AT3G11780", "url": "https://bar.utoronto.ca/thalemine/portal.do?externalids=AT3G11780", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "cd00917", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd00917", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "820352", "url": "https://www.ncbi.nlm.nih.gov/gene/820352", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR003172", "url": "https://www.ebi.ac.uk/interpro/entry/IPR003172", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR014756", "url": "https://www.ebi.ac.uk/interpro/entry/IPR014756", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR033917", "url": "https://www.ebi.ac.uk/interpro/entry/IPR033917", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR039670", "url": "https://www.ebi.ac.uk/interpro/entry/IPR039670", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT3G11780", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G11780", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "RYCDKKA", "url": "https://omabrowser.org/oma/group/RYCDKKA/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "F4J7G5", "url": "https://www.orthodb.org/?gene=F4J7G5", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "Q9SF20", "url": "https://www.orthodb.org/?gene=Q9SF20", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR11306", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR11306", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR11306:SF39", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR11306:SF39", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF02221", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF02221", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_566400", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_566400", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G11780", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G11780", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "F4J7G5", "url": "https://www.uniprot.org/uniprotkb/F4J7G5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F4J7G5-1", "url": "https://www.uniprot.org/uniprotkb/F4J7G5-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9SF20", "url": "https://www.uniprot.org/uniprotkb/Q9SF20", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9SF20-1", "url": "https://www.uniprot.org/uniprotkb/Q9SF20-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MSKFTGFSSLAISYFLLVSTIVAATDVHYCDNNEEYEVKVQGVDITPYPIARGEPATFRISANTDTEISSGKLVIEVSYFGWHIHSETHDLCDETSCPVAIGDFLVAHSQVLPGYTPPGSYSLKMKMLDGRKKELTCIKFSFDIGFGSSVADM", "length": 153, "header": "tr|Q9SF20-1|Q9SF20_ARATH Isoform 1 of MD-2-related lipid recognition domain-containing protein / ML domain-containing protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SF20-1" }, "isoforms": [ { "isoform_ac": "F4J7G5-1", "url": "https://www.uniprot.org/uniprotkb/F4J7G5/entry", "sequence": { "sequence": "MSKFTGFSSLAISYFLLVSTIVAATDVHYCDNNEEYEVKVQGVDITPYPIARGEPATFRISANTDTEISSGKLVIEVSYFGWHIHSETHDLCDETSCPVAIGDFLVAHSQVLPGYTPPTEKRFNLVSIAYYEFHVEGSYSLKMKMLDGRKKELTCIKFSFDIGFGSSVADM", "length": 171, "header": "tr|F4J7G5-1|F4J7G5_ARATH Computationally mapped isoform of MD-2-related lipid recognition domain-containing protein / ML domain-containing protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SF20-1" }, "locus": { "chromosome": "3", "start_pos": 3724136, "end_pos": 3725593, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G11780.2", "url": "https://www.ensemblgenomes.org/id/AT3G11780.2" }, { "database": "Ensembl Peptide", "id": "AT3G11780.2", "url": "https://www.ensemblgenomes.org/id/AT3G11780.2" } ] } }, { "isoform_ac": "Q9SF20-1", "url": "https://www.uniprot.org/uniprotkb/Q9SF20/entry", "sequence": { "sequence": "MSKFTGFSSLAISYFLLVSTIVAATDVHYCDNNEEYEVKVQGVDITPYPIARGEPATFRISANTDTEISSGKLVIEVSYFGWHIHSETHDLCDETSCPVAIGDFLVAHSQVLPGYTPPGSYSLKMKMLDGRKKELTCIKFSFDIGFGSSVADM", "length": 153, "header": "tr|Q9SF20-1|Q9SF20_ARATH Isoform 1 of MD-2-related lipid recognition domain-containing protein / ML domain-containing protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SF20-1" }, "locus": { "chromosome": "3", "start_pos": 3723894, "end_pos": 3725618, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G11780.1", "url": "https://www.ensemblgenomes.org/id/AT3G11780.1" }, { "database": "Ensembl Peptide", "id": "AT3G11780.1", "url": "https://www.ensemblgenomes.org/id/AT3G11780.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9SF20", "url": "https://www.uniprot.org/uniprotkb/Q9SF20" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9SF20", "url": "https://www.uniprot.org/uniprotkb/Q9SF20" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G11780", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G11780", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Biological Process", "total": 2, "go_terms": [ { "name": "intracellular sterol transport", "id": "GO:0032366", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0032366", "evidence": [ { 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"categories": [ "Protein Classification" ] }, { "id": "830687", "url": "https://www.ncbi.nlm.nih.gov/gene/830687", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR000504", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000504", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR007201", "url": "https://www.ebi.ac.uk/interpro/entry/IPR007201", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR012677", "url": "https://www.ebi.ac.uk/interpro/entry/IPR012677", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR035979", "url": "https://www.ebi.ac.uk/interpro/entry/IPR035979", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "RRKIHYQ", "url": "https://omabrowser.org/oma/group/RRKIHYQ/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PF04059", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF04059", "database": 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"MASSDDPAPENNHVSVLARQARNPPTHFFFPHNPSPRTYYFSAPPQIYFISDIYLPPPPSIWVYYPLWYINPNPNVYESTQELPQRYSPNPSQEMTLPPTSSRRVFGRRSYELCEKVTWRTSIKPEVESNGDHITTVMLRNIPNRYTREMMIQFMDKHCEEANKSGKNEEFTISAYDFIYLPIDFRTTMNKGYAFVNFTNAKAVSKFKAACNNKPWCHFYSKKELEITYARIQANELVKRFQHMTYPEEAYSAVCFSPARSGGKDTVQTTMVGKCNEPVCSV", "length": 282, "header": "tr|Q9SD91-1|Q9SD91_ARATH Isoform 1 of MEI2 C-terminal RRM only like 2 OS=Arabidopsis thaliana OX=3702 GN=MCT2 PE=4 SV=1 CANONICAL=Q9SD91-1" }, "isoforms": [ { "isoform_ac": "F4K9I2-1", "url": "https://www.uniprot.org/uniprotkb/F4K9I2/entry", "sequence": { "sequence": "MASSDDPAPENNHVSVLARQARNPPTHFFFPHNPSPRTYYFSAPPQIYFISDIYLPPPPSIWVYYPLWYINPNPNVYESTQELPQRYSPNPSQEMTLPPTSSRRVFGRRSYELCEKVTWRTSIKPEVESNGDHITTVMLRNIPNRYTREMMIQFMDKHCEEANKSGKNEEFTISAYDFIYLPIDFRTTMNKGYAFVNFTNAKAVSKFKAACNNKPWCHFYSKKELEITYARIQANELVKRFQHMTYPEEAYSAVCFSPARSGGKDTVQTTMVGKCNEPDGKEKTQTPNQIQVKF", "length": 294, "header": "tr|F4K9I2-1|F4K9I2_ARATH Computationally mapped isoform of MEI2 C-terminal RRM only like 2 OS=Arabidopsis thaliana OX=3702 GN=MCT2 PE=4 SV=1 CANONICAL=Q9SD91-1" }, "locus": { "chromosome": "5", "start_pos": 2530834, "end_pos": 2532742, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT5G07930.3", "url": "https://www.ensemblgenomes.org/id/AT5G07930.3" }, { "database": "Ensembl Peptide", "id": "AT5G07930.3", "url": "https://www.ensemblgenomes.org/id/AT5G07930.3" } ] } }, { "isoform_ac": "Q9SD91-1", "url": "https://www.uniprot.org/uniprotkb/Q9SD91/entry", "sequence": { "sequence": "MASSDDPAPENNHVSVLARQARNPPTHFFFPHNPSPRTYYFSAPPQIYFISDIYLPPPPSIWVYYPLWYINPNPNVYESTQELPQRYSPNPSQEMTLPPTSSRRVFGRRSYELCEKVTWRTSIKPEVESNGDHITTVMLRNIPNRYTREMMIQFMDKHCEEANKSGKNEEFTISAYDFIYLPIDFRTTMNKGYAFVNFTNAKAVSKFKAACNNKPWCHFYSKKELEITYARIQANELVKRFQHMTYPEEAYSAVCFSPARSGGKDTVQTTMVGKCNEPVCSV", "length": 282, "header": "tr|Q9SD91-1|Q9SD91_ARATH Isoform 1 of MEI2 C-terminal RRM only like 2 OS=Arabidopsis thaliana OX=3702 GN=MCT2 PE=4 SV=1 CANONICAL=Q9SD91-1" }, "locus": { "chromosome": 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"https://www.ebi.ac.uk/interpro/entry/IPR023210", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036812", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036812", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR044485", "url": "https://www.ebi.ac.uk/interpro/entry/IPR044485", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT2G21260", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT2G21260", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "MHSPMGI", "url": "https://omabrowser.org/oma/group/MHSPMGI/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A1P8B1D1", "url": "https://www.orthodb.org/?gene=A0A1P8B1D1", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "Q9SJV1", "url": "https://www.orthodb.org/?gene=Q9SJV1", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR43827", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR43827", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR43827:SF3", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR43827:SF3", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00248", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00248", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "AT2G21260", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT2G21260", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "A0A1P8B1D1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B1D1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A1P8B1D1-1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B1D1-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9SJV1", "url": "https://www.uniprot.org/uniprotkb/Q9SJV1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9SJV1-1", "url": "https://www.uniprot.org/uniprotkb/Q9SJV1-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MEITLNSGFKMPIIGLGVWRMEKEELRDLIIDAIKIGYRHLDCAANYKNEAEVGEALTEAFTTGLVKREDLFITTKLWSSDHGHVIEACKDSLKKLQLDYLDLFLVHIPIATKHTGIGTTDSALGDDGVLDIDTTISLETTWHDMEKLVSMGLVRSIGISNYDVFLTRDCLAYSKIKPAVNQIETHPYFQRDSLVKFCQKHGICVTAHTPLGGATANAEWFGTVSCLDDPVLKDVAEKYKQTVAQIVLRWGIQRNTVVIPKTSKPERLEENFQVFDFQLSKEDMEVIKSMERNYRTHQTAKFWGIELYA", "length": 309, "header": "tr|Q9SJV1-1|Q9SJV1_ARATH Isoform 1 of NAD(P)-linked oxidoreductase superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SJV1-1" }, "isoforms": [ { "isoform_ac": "A0A1P8B1D1-1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B1D1/entry", "sequence": { "sequence": "MLSVLVLQLWSSDHGHVIEACKDSLKKLQLDYLDLFLVHIPIATKHTGIGTTDSALGDDGVLDIDTTISLETTWHDMEKLVSMGLVRSIGISNYDVFLTRDCLAYSKIKPAVNQIETHPYFQRDSLVKFCQKHGICVTAHTPLGGATANAEWFGTVSCLDDPVLKDVAEKYKQTVAQIVLRWGIQRNTVVIPKTSKPERLEENFQVFDFQLSKEDMEVIKSMERNYRTHQTAKFWGIELYA", "length": 241, "header": "tr|A0A1P8B1D1-1|Q9SJV1_ARATH Computationally mapped isoform of NAD(P)-linked oxidoreductase superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SJV1-1" }, "locus": { "chromosome": "2", "start_pos": 9105583, "end_pos": 9107380, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT2G21260.2", "url": "https://www.ensemblgenomes.org/id/AT2G21260.2" }, { "database": "Ensembl Peptide", "id": "AT2G21260.2", "url": "https://www.ensemblgenomes.org/id/AT2G21260.2" } ] } }, { "isoform_ac": "Q9SJV1-1", "url": "https://www.uniprot.org/uniprotkb/Q9SJV1/entry", "sequence": { "sequence": "MEITLNSGFKMPIIGLGVWRMEKEELRDLIIDAIKIGYRHLDCAANYKNEAEVGEALTEAFTTGLVKREDLFITTKLWSSDHGHVIEACKDSLKKLQLDYLDLFLVHIPIATKHTGIGTTDSALGDDGVLDIDTTISLETTWHDMEKLVSMGLVRSIGISNYDVFLTRDCLAYSKIKPAVNQIETHPYFQRDSLVKFCQKHGICVTAHTPLGGATANAEWFGTVSCLDDPVLKDVAEKYKQTVAQIVLRWGIQRNTVVIPKTSKPERLEENFQVFDFQLSKEDMEVIKSMERNYRTHQTAKFWGIELYA", "length": 309, "header": "tr|Q9SJV1-1|Q9SJV1_ARATH Isoform 1 of NAD(P)-linked oxidoreductase superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SJV1-1" }, "locus": { "chromosome": "2", "start_pos": 9105583, "end_pos": 9107380, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT2G21260.1", "url": "https://www.ensemblgenomes.org/id/AT2G21260.1" }, { "database": "Ensembl Peptide", "id": "AT2G21260.1", "url": "https://www.ensemblgenomes.org/id/AT2G21260.1" } ] } } ], "glycosylation": [], "phosphorylation": [ { "start_pos": 256, "end_pos": 256, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Thr", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SJV1", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SJV1" } ], "site_lbl": "Thr256" } ], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "1999", "authors": "Lin X, Kaul S, Rounsley S, Shea T P, Benito M I, Town C D, Fujii C Y, Mason T, Bowman C L, Barnstead M, Feldblyum T V, Buell C R, Ketchum K A, Lee J, Ronning C M, Koo H L, Moffat K S, Cronin L A, Shen M, Pai G, Van Aken S, Umayam L, Tallon L J, Gill J E, Adams M D, Carrera A J, Creasy T H, Goodman H M, Somerville C R, Copenhaver G P, Preuss D, Nierman W C, White O, Eisen J A, Salzberg S L, Fraser C M, Venter J C", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8B1D1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B1D1" } ], "reference": [ { "type": "PubMed", "id": "10617197", "url": "https://glygen.org/publication/PubMed/10617197" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8B1D1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B1D1" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT2G21260", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT2G21260", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 3, "go_terms": [ { "name": "oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor", "id": "GO:0016616", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016616", "evidence": [ { "database": "UniProtKB", "id": "Q9SJV1", "url": "https://www.uniprot.org/uniprotkb/Q9SJV1" } ], "pmid": "" }, { "name": "aldose reductase (NADPH) activity", "id": "GO:0004032", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004032", "evidence": [ { "database": "UniProtKB", "id": "Q9SJV1", "url": "https://www.uniprot.org/uniprotkb/Q9SJV1" } ], "pmid": "" }, { "name": "aldose-6-phosphate reductase (NADPH) activity", "id": "GO:0047641", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0047641", "evidence": [ { "database": "UniProtKB", "id": "Q9SJV1", "url": "https://www.uniprot.org/uniprotkb/Q9SJV1" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 3, "go_terms": [ { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "Q9SJV1", "url": "https://www.uniprot.org/uniprotkb/Q9SJV1" } ], "pmid": "" }, { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "Q9SJV1", "url": "https://www.uniprot.org/uniprotkb/Q9SJV1" } ], "pmid": "" }, { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "Q9SJV1", "url": "https://www.uniprot.org/uniprotkb/Q9SJV1" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "Q9SJV1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SJV1" }, { "id": "PF00248", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00248" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "NADP-dependent oxidoreductase", "eco_id": "ECO_0000259", "start_pos": 14, "end_pos": 290, "start_aa": "Ile", "end_aa": "Met", "glycosite_overlap": [] } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [ 256 ], "sequon_annotation_sites": [] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 } ], "sort_fields": [ "start_pos", "end_pos", "kinase_uniprot_canonical_ac", "kinase_gene_name", "residue", "comment", "site_lbl" ] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "Q9SJ16-1", "uniprot_ac": "Q9SJ16", "uniprot_id": "Q9SJ16_ARATH", "mass": { "chemical_mass": 65590.0, "monoisotopic_mass": 65590.0 }, "refseq": {}, "gene_names": [ { "name": "F7D8.15", "type": "synonym", "evidence": [ { "id": "Q9SJ16", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SJ16" } ] }, { "name": "F7D8_15", "type": "synonym", "evidence": [ { "id": "Q9SJ16", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SJ16" } ] } ], "protein_names": [ { "name": "Cysteine/Histidine-rich C1 domain family protein", "type": "synonym", "evidence": [ { "id": "Q9SJ16", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SJ16/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9SJ16", "url": "https://www.uniprot.org/uniprotkb/Q9SJ16" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9SJ16", "locus": {} } ], "crossref": [ { "id": "AT2G21830", "url": "https://bar.utoronto.ca/thalemine/portal.do?externalids=AT2G21830", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "816719", "url": "https://www.ncbi.nlm.nih.gov/gene/816719", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "Q9SJ16", "url": "https://www.ebi.ac.uk/intact/interactors/id:Q9SJ16*", "database": "IntAct", "categories": [ "Other" ] }, { "id": "IPR001965", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001965", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR002219", "url": "https://www.ebi.ac.uk/interpro/entry/IPR002219", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR004146", "url": "https://www.ebi.ac.uk/interpro/entry/IPR004146", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR046349", "url": "https://www.ebi.ac.uk/interpro/entry/IPR046349", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR053192", "url": "https://www.ebi.ac.uk/interpro/entry/IPR053192", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT2G21830", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT2G21830", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "SHCGEIC", "url": "https://omabrowser.org/oma/group/SHCGEIC/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR32410", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR32410", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR32410:SF203", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR32410:SF203", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF03107", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF03107", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "AT2G21830", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT2G21830", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "A0A1P8B1Q5", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B1Q5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A1P8B1Q5-1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B1Q5-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9SJ16", "url": "https://www.uniprot.org/uniprotkb/Q9SJ16", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9SJ16-1", "url": "https://www.uniprot.org/uniprotkb/Q9SJ16-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MGKLEHFSHSCPLTSPEIVAEGICNICFQDQVVEYACKPCNFDICKTCSKLPQKVSHGFHSDHPLEFSLFQYDRKPGYIVCSCCGNMSSCSFYECKECEIYLDLGCALLKNVFTGWDVREMLHYSHEHLLRRCKPGQDARGSCLLCELPLSPSSICYGCVYCYSFLHERCLDLPTEIRHPVHLEHPLRRLDYIRSGGRTFCGACREKIDSVPFGCLECGFYIHMRCADSFLRCLMHESHEHKLFYVSSNAKEHFGRNNCCQICLGAVVSSLDSYYHCIECELEFHFECLGISKTISKRSCHIHPLVCKRVREEDDSLEYCGVCETLIHAGHHVYSCEECDFLGHIECILREKEPSPLYLKDLYSCVEDVKRATNQEDYETNKVMVHDINHNHVVTSIDMCELEGKEHCHICEKEILGNPWKCETCNFVTHNFCVELGKPSRHRFHWNHLLTLMPKPVATDMTSCKSCREDIKGFNLFCRICNFIIHVSCAMKGKRFLGMTGPKVVGTWRGRCLGGKHRMVQVMFPRSYQKVCIICHERVLGKAVSCMECETIYHLRCIDRHRIKDRDSS", "length": 569, "header": "tr|Q9SJ16-1|Q9SJ16_ARATH Isoform 1 of Cysteine/Histidine-rich C1 domain family protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=2 CANONICAL=Q9SJ16-1" }, "isoforms": [ { "isoform_ac": "A0A1P8B1Q5-1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B1Q5/entry", "sequence": { "sequence": "MGKLEHFSHSCPLTSPEIVAEGICNICFQDQVVEYACKPCNFDICKTCSKLPQKVSHGFHSDHPLEFSLFQYDRKPGYIVCSCCGNMSSCSFYECKECEIYLDLGCALLKNVFTGWDVREMLHYSHEHLLRRCKPGQDARGSCLLCELPLSPSSICYGCVYCYSFLHERCLDLPTEIRHPVHLEHPLRRLDYIRSGGRTFCGACREKIDSVPFGCLECGFYIHMRCADSFLRCLMHESHEHKLFYVSSNAKEHFGRNNCCQICLGAVVSSLDSYYHCIECELEFHFECLGISKTISKRSCHIHPLVCKRVREEDDSLEYCGVCETLIHAGHHVYSCEECDFLGHIECILREKEPSPLYLKDLYSCVEDVKRATNQEDYETNKVMVHDINHNHVVTSIDMCELEGKEHCHICEKEILGNPWKCETCNFVTHNFCVELGKPSRHRFHWNHLLTLMPKPVATDMTSCKSCREDIKGTESRWNLERTLFGRQA", "length": 489, "header": "tr|A0A1P8B1Q5-1|Q9SJ16_ARATH Computationally mapped isoform of Cysteine/Histidine-rich C1 domain family protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SJ16-1" }, "locus": { "chromosome": "2", "start_pos": 9303713, "end_pos": 9306025, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT2G21830.2", "url": "https://www.ensemblgenomes.org/id/AT2G21830.2" }, { "database": "Ensembl Peptide", "id": "AT2G21830.2", "url": "https://www.ensemblgenomes.org/id/AT2G21830.2" } ] } }, { "isoform_ac": "Q9SJ16-1", "url": "https://www.uniprot.org/uniprotkb/Q9SJ16/entry", "sequence": { "sequence": "MGKLEHFSHSCPLTSPEIVAEGICNICFQDQVVEYACKPCNFDICKTCSKLPQKVSHGFHSDHPLEFSLFQYDRKPGYIVCSCCGNMSSCSFYECKECEIYLDLGCALLKNVFTGWDVREMLHYSHEHLLRRCKPGQDARGSCLLCELPLSPSSICYGCVYCYSFLHERCLDLPTEIRHPVHLEHPLRRLDYIRSGGRTFCGACREKIDSVPFGCLECGFYIHMRCADSFLRCLMHESHEHKLFYVSSNAKEHFGRNNCCQICLGAVVSSLDSYYHCIECELEFHFECLGISKTISKRSCHIHPLVCKRVREEDDSLEYCGVCETLIHAGHHVYSCEECDFLGHIECILREKEPSPLYLKDLYSCVEDVKRATNQEDYETNKVMVHDINHNHVVTSIDMCELEGKEHCHICEKEILGNPWKCETCNFVTHNFCVELGKPSRHRFHWNHLLTLMPKPVATDMTSCKSCREDIKGFNLFCRICNFIIHVSCAMKGKRFLGMTGPKVVGTWRGRCLGGKHRMVQVMFPRSYQKVCIICHERVLGKAVSCMECETIYHLRCIDRHRIKDRDSS", "length": 569, "header": "tr|Q9SJ16-1|Q9SJ16_ARATH Isoform 1 of Cysteine/Histidine-rich C1 domain family protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=2 CANONICAL=Q9SJ16-1" }, "locus": { "chromosome": "2", "start_pos": 9303713, "end_pos": 9306025, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT2G21830.1", "url": "https://www.ensemblgenomes.org/id/AT2G21830.1" }, { "database": "Ensembl Peptide", "id": "AT2G21830.1", "url": "https://www.ensemblgenomes.org/id/AT2G21830.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "1999", "authors": "Lin X, Kaul S, Rounsley S, Shea T P, Benito M I, Town C D, Fujii C Y, Mason T, Bowman C L, Barnstead M, Feldblyum T V, Buell C R, Ketchum K A, Lee J, Ronning C M, Koo H L, Moffat K S, Cronin L A, Shen M, Pai G, Van Aken S, Umayam L, Tallon L J, Gill J E, Adams M D, Carrera A J, Creasy T H, Goodman H M, Somerville C R, Copenhaver G P, Preuss D, Nierman W C, White O, Eisen J A, Salzberg S L, Fraser C M, Venter J C", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8B1Q5", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B1Q5" } ], "reference": [ { "type": "PubMed", "id": "10617197", "url": "https://glygen.org/publication/PubMed/10617197" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8B1Q5", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B1Q5" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT2G21830", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT2G21830", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "zinc ion binding", "id": "GO:0008270", "url": 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"https://bar.utoronto.ca/thalemine/portal.do?externalids=AT2G16660", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "cd17354", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd17354", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "816167", "url": "https://www.ncbi.nlm.nih.gov/gene/816167", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR010658", "url": "https://www.ebi.ac.uk/interpro/entry/IPR010658", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036259", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036259", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR056555", "url": "https://www.ebi.ac.uk/interpro/entry/IPR056555", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT2G16660", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT2G16660", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "PDGLGCY", "url": "https://omabrowser.org/oma/group/PDGLGCY/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A1P8B299", "url": "https://www.orthodb.org/?gene=A0A1P8B299", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "Q9SLF1", "url": "https://www.orthodb.org/?gene=Q9SLF1", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR21576", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR21576", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR21576:SF78", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR21576:SF78", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF06813", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF06813", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF23262", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF23262", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "AT2G16660", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT2G16660", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "A0A1P8B299", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B299", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A1P8B299-1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B299-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9SLF1", "url": "https://www.uniprot.org/uniprotkb/Q9SLF1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9SLF1-1", "url": "https://www.uniprot.org/uniprotkb/Q9SLF1-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MGFQRSISSSSALKWLGFVTAVWVQSISGNNYTFSNYSGALKSLMNLNQLELNNLSVAKDVGKAFGILAGLASDRLPTPVILLIGCFEGLLGYGVQWLVVSRTIQPIPYWQMCIFLCMGGNSTTWMNTAVLVTCIRNFRRNRGPVSGILKGYVGLSTAIFTDLCTALFSNDPASFLVLLAVVPFAVCLTAVFFLREIPPASSAAEENEETRYFTIFNIVAVVVAVYLQSYDIIGIKTGVFSVAFASILLFLLASPIAIPFHSFIKSLNYGEQDDLEGRIQEPLLRSEIAAAEKEVIVVAAVAAEEEEKKRKKPVLGEDHTIMEAVLTVDFWVLFVSFLCGVGTGLAVMNNMGQIGLALGYTNVSIFVSMTSIWGFFGRILSGTLSEYFLKKAGTPRPLWNAASQILMAVGYILMALAVPNSLYIGSMVVGVCYGVRLAITVPTASELFGLKYYGLIYNILVLNLPLGSFLFSGLLAGFLYDAEATPTPGGGNTCVGAHCYRLIFIVMALASVIGVGLDLVLAYRTKEIYAKIHASKKSKKSGGSLS", "length": 546, "header": "tr|Q9SLF1-1|Q9SLF1_ARATH Isoform 1 of Major facilitator superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SLF1-1" }, "isoforms": [ { "isoform_ac": "A0A1P8B299-1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B299/entry", "sequence": { "sequence": "MGFQRSISSSSALKWLGFVTAVWVQSISGNNYTFSNYSGALKSLMNLNQLELNNLSVAKDVGKAFGILAGLASDRLPTPVILLIGCFEGLLGYGVQWLVVSRTIQPIPYWQMCIFLCMGGNSTTWMNTAVLVTCIRNFRRNRGPVSGILKGYVGLSTAIFTDLCTALFSNDPASFLVLLAVVPFAVCLTAVFFLREIPPASSAAEENEETRYFTIFNIVAVVVAVYLQSYDIIGIKTGVFSVAFASILLFLLASPIAIPFHSFIKSLNYGEQDDLEGRIQEPLLRSEIAAAEKEVIVVAAVAAEEEEKKRKKPVLGEDHTIMEAVLTVDFWVLFVSFLCGVGTGLAVMNNMGQIGLALGYTNVSIFVSMTSIWGFFGRILSGTLSEYFLK", "length": 390, "header": "tr|A0A1P8B299-1|Q9SLF1_ARATH Computationally mapped isoform of Major facilitator superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SLF1-1" }, "locus": { "chromosome": "2", "start_pos": 7218706, "end_pos": 7221814, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT2G16660.2", "url": "https://www.ensemblgenomes.org/id/AT2G16660.2" }, { "database": "Ensembl Peptide", "id": "AT2G16660.2", "url": "https://www.ensemblgenomes.org/id/AT2G16660.2" } ] } }, { "isoform_ac": "Q9SLF1-1", "url": "https://www.uniprot.org/uniprotkb/Q9SLF1/entry", "sequence": { "sequence": "MGFQRSISSSSALKWLGFVTAVWVQSISGNNYTFSNYSGALKSLMNLNQLELNNLSVAKDVGKAFGILAGLASDRLPTPVILLIGCFEGLLGYGVQWLVVSRTIQPIPYWQMCIFLCMGGNSTTWMNTAVLVTCIRNFRRNRGPVSGILKGYVGLSTAIFTDLCTALFSNDPASFLVLLAVVPFAVCLTAVFFLREIPPASSAAEENEETRYFTIFNIVAVVVAVYLQSYDIIGIKTGVFSVAFASILLFLLASPIAIPFHSFIKSLNYGEQDDLEGRIQEPLLRSEIAAAEKEVIVVAAVAAEEEEKKRKKPVLGEDHTIMEAVLTVDFWVLFVSFLCGVGTGLAVMNNMGQIGLALGYTNVSIFVSMTSIWGFFGRILSGTLSEYFLKKAGTPRPLWNAASQILMAVGYILMALAVPNSLYIGSMVVGVCYGVRLAITVPTASELFGLKYYGLIYNILVLNLPLGSFLFSGLLAGFLYDAEATPTPGGGNTCVGAHCYRLIFIVMALASVIGVGLDLVLAYRTKEIYAKIHASKKSKKSGGSLS", "length": 546, "header": "tr|Q9SLF1-1|Q9SLF1_ARATH Isoform 1 of Major facilitator superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SLF1-1" }, "locus": { "chromosome": "2", "start_pos": 7218654, "end_pos": 7221890, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT2G16660.1", "url": "https://www.ensemblgenomes.org/id/AT2G16660.1" }, { "database": "Ensembl Peptide", "id": "AT2G16660.1", "url": "https://www.ensemblgenomes.org/id/AT2G16660.1" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "other", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 487, "start_aa": "Thr", "end_pos": 487, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr487", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ], "filter_code": "000000000000000010000.00000000001000.0.01000" } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "1999", "authors": "Lin X, Kaul S, Rounsley S, Shea T P, Benito M I, Town C D, Fujii C Y, Mason T, Bowman C L, Barnstead M, Feldblyum T V, Buell C R, Ketchum K A, Lee J, Ronning C M, Koo H L, Moffat K S, Cronin L A, Shen M, Pai G, Van Aken S, Umayam L, Tallon L J, Gill J E, Adams M D, Carrera A J, Creasy T H, Goodman H M, Somerville C R, Copenhaver G P, Preuss D, Nierman W C, White O, Eisen J A, Salzberg S L, Fraser C M, Venter J C", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8B299", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B299" } ], "reference": [ { "type": "PubMed", "id": "10617197", "url": "https://glygen.org/publication/PubMed/10617197" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8B299", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B299" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT2G16660", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT2G16660", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "Q54L13-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MSDTINSSNGNNNNELTDSNYSITKEEEDSLKNSIDNVNININDDQDDDNTRYLKKRNKKKIEKEKGLHRFYKPPHIIKNKRTQRTISFVWGVLTILISGTLYGFSVISNEVRDRLDYSQTDIGLAISLGDVGIYIGLTVGYFFDLFGPFYTSLLATVLYIIGYMGVWGILKGTIINNVYLLSFFLFLVGQASHATFTASIVPNVHNYTIKHRGKIGGILVGMFALSSGIFGIIYKSTFKKNNDVEGYLLFLAILLSSVAFISAFIVRVVKVEGVEEPEIQSDSDDADQLDNSIDKKEQKLSDQFNQSTEDLTISGNSITNGGNIGIDEENGTSSSGSGSSSDNNKGSGDLNSSDVNMQKKGGKLKTLINNITNNNNSLDSSSYKLLNKIEDFDEVAAIGADLDVERNPNYLDGRRDISGLKLLKQWEFWLMWIIYFFAAGTSLMFLNNIAVMAQAFNRPSSIHSDLVIIFACSNLTGRAGNGLLSDFISKKYSRFWCVVLSSFILSLTHLIISFELDALFYPATIITGIGYGGMVSIMVSLTSLRFGPRRFGINFGFLAISSASASLAFSTFSSKIYDSLSVDGEKCHGTHCFRTCFILSFVFNLVCIFIGMFIIFKHRRNQLRGK", "length": 627 }, "evidence": [ { "id": "Q9SLF1", "url": "https://omabrowser.org/oma/group/Q9SLF1/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "Q9SLF1", "url": "https://www.uniprot.org/uniprotkb/Q9SLF1" } ], "pmid": "" }, { "name": "chloroplast", "id": "GO:0009507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009507", "evidence": [ { "database": "UniProtKB", "id": "Q9SLF1", "url": "https://www.uniprot.org/uniprotkb/Q9SLF1" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 121, "end_pos": 123, "annotation": "n_glycosylation_sequon" }, { "start_pos": 31, "end_pos": 33, "annotation": "n_glycosylation_sequon" }, { "start_pos": 362, "end_pos": 364, "annotation": "n_glycosylation_sequon" }, { "start_pos": 36, "end_pos": 38, "annotation": "n_glycosylation_sequon" }, { "start_pos": 54, "end_pos": 56, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], 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"sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "Q9SLC7-1", "uniprot_ac": "Q9SLC7", "uniprot_id": "Q9SLC7_ARATH", "mass": { "chemical_mass": 74212.0, "monoisotopic_mass": 74212.0 }, "refseq": { "ac": "NP_001031531", "name": "nucleolar protein gar2-like protein", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001031531" }, "gene_names": [ { "name": "MHK10.4", "type": "recommended", "evidence": [ { "id": "Q9SLC7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SLC7" } ] }, { "name": "MHK10.4", "type": "synonym", "evidence": [ { "id": "NP_001031531", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001031531" } ] }, { "name": "MHK10_4", "type": "synonym", "evidence": [ { "id": "NP_001031531", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001031531" }, { "id": "Q9SLC7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SLC7" } ] } ], "protein_names": [ { "name": "Nucleolar protein gar2-like protein", "type": "synonym", "evidence": [ { "id": "Q9SLC7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SLC7/entry#names_and_taxonomy" } ] }, { "name": "nucleolar protein gar2-like protein", "type": "synonym", "evidence": [ { "id": "NP_001031531", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001031531" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9SLC7", "url": "https://www.uniprot.org/uniprotkb/Q9SLC7" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "MHK10.4", "url": "https://www.uniprot.org/uniprotkb/Q9SLC7", "locus": {} } ], "crossref": [ { "id": "AT2G42320", "url": "https://bar.utoronto.ca/thalemine/portal.do?externalids=AT2G42320", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "818833", "url": "https://www.ncbi.nlm.nih.gov/gene/818833", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR021827", "url": "https://www.ebi.ac.uk/interpro/entry/IPR021827", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT2G42320", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT2G42320", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "IAHFTAQ", "url": "https://omabrowser.org/oma/group/IAHFTAQ/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR31344", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31344", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR31344:SF11", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31344:SF11", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "NP_001031531", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001031531", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT2G42320", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT2G42320", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "A0A1P8B2E0", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B2E0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A1P8B2E0-1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B2E0-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9SLC7", "url": "https://www.uniprot.org/uniprotkb/Q9SLC7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9SLC7-1", "url": "https://www.uniprot.org/uniprotkb/Q9SLC7-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MKARTTNNVVQSKRSTKSVRKDQKLQKTNSQKKTEQEKHKDLDTKEESSNISTVASDSTIQSDPSESYETVDVRYLDDDNGVIASADAHQESDSSSVVDKTEKEHNLSGSICDLEKDVDEQECKDANIDKDAREGISADVWEDASNGALSAGSENEAADVTENNGGNFEDGSSEEKIERLETRIEKLEEELREVAALEISLYSVVPDHCSSAHKLHTPARRISRIYIHACKHFTQGKRATIARNSVSGLVLVAKSCGNDVSRLTFWLSNIIALRQIISQAFGRSRITQISEPNESGNSDSGKKTNLRWKNGFQQLLEDWQETETFTTALEKIEFWVFSRIVESVWWQVFTPHMQSPEDDSSASKSNGKLMGPSLGDQNQGTFSISLWKNAFRDALQRICPMRGAGHECGCLPVLARMVMDKCIGRFDVAMFNAILRESEHQIPTDPVSDPILDSKVLPIPAGDLSFGSGAQLKNAIGNWSRCLTEMFGMNSDDSSAKEKRNSEDDHVESKAFVLLNELSDLLMLPKDMLMEISIREEICPSISLPLIKRILCNFTPDEFCPDQVPGAVLEELNAAESIGDRKLSEASFPYAASSVSYMPPSTMDIAEKVAEASAKLSRNVSMIQRKGYTSDEELEELDSPLTSIVDKASDFTGSATSNARYKLLRQVWV", "length": 669, "header": "tr|Q9SLC7-1|Q9SLC7_ARATH Isoform 1 of Nucleolar protein gar2-like protein OS=Arabidopsis thaliana OX=3702 GN=MHK10.4 PE=1 SV=1 CANONICAL=Q9SLC7-1" }, "isoforms": [ { "isoform_ac": "A0A1P8B2E0-1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B2E0/entry", "sequence": { "sequence": "MKARTTNNVVQSKRSTKSVRKDQKLQKTNSQKKTEQEKHKDLDTKEESSNISTVASDSTIQSDPSESYETVDVRYLDDDNGVIASADAHQESDSSSVVDKTEKEHNLSGSICDLEKDVDEQECKDANIDKDAREGISADVWEDASNGALSAGSENEAADVTENNGGNFEDGSSEEKIERLETRIEKLEEELREVAALEISLYSVVPDHCSSAHKLHTPARRISRIYIHACKHFTQGKRATIARNSVSGLVLVAKSCGNDVSRLTFWLSNIIALRQIISQAFGRSRITQISEPNESGNSDSGKKTNLRWKNGFQQLLEDWQETETFTTALEKIEFWVFSRIVESVWWQVFTPHMQSPEDDSSASKSNGKLMGPSLGDQNQGTFSISLWKNAFRDALQRICPMRGAGHECGCLPVLARMVMDKCIGRFDVAMFNAILRESEHQIPTDPVSDPILDSKVLPIPAGDLSFGSGAQLKNAFPCRLAIGLDASLKCLA", "length": 492, "header": "tr|A0A1P8B2E0-1|Q9SLC7_ARATH Computationally mapped isoform of Nucleolar protein gar2-like protein OS=Arabidopsis thaliana OX=3702 GN=MHK10.4 PE=1 SV=1 CANONICAL=Q9SLC7-1" }, "locus": { "chromosome": "2", "start_pos": 17627467, "end_pos": 17629936, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT2G42320.3", "url": "https://www.ensemblgenomes.org/id/AT2G42320.3" }, { "database": "Ensembl Peptide", "id": "AT2G42320.3", "url": "https://www.ensemblgenomes.org/id/AT2G42320.3" } ] } }, { "isoform_ac": "Q9SLC7-1", "url": "https://www.uniprot.org/uniprotkb/Q9SLC7/entry", "sequence": { "sequence": "MKARTTNNVVQSKRSTKSVRKDQKLQKTNSQKKTEQEKHKDLDTKEESSNISTVASDSTIQSDPSESYETVDVRYLDDDNGVIASADAHQESDSSSVVDKTEKEHNLSGSICDLEKDVDEQECKDANIDKDAREGISADVWEDASNGALSAGSENEAADVTENNGGNFEDGSSEEKIERLETRIEKLEEELREVAALEISLYSVVPDHCSSAHKLHTPARRISRIYIHACKHFTQGKRATIARNSVSGLVLVAKSCGNDVSRLTFWLSNIIALRQIISQAFGRSRITQISEPNESGNSDSGKKTNLRWKNGFQQLLEDWQETETFTTALEKIEFWVFSRIVESVWWQVFTPHMQSPEDDSSASKSNGKLMGPSLGDQNQGTFSISLWKNAFRDALQRICPMRGAGHECGCLPVLARMVMDKCIGRFDVAMFNAILRESEHQIPTDPVSDPILDSKVLPIPAGDLSFGSGAQLKNAIGNWSRCLTEMFGMNSDDSSAKEKRNSEDDHVESKAFVLLNELSDLLMLPKDMLMEISIREEICPSISLPLIKRILCNFTPDEFCPDQVPGAVLEELNAAESIGDRKLSEASFPYAASSVSYMPPSTMDIAEKVAEASAKLSRNVSMIQRKGYTSDEELEELDSPLTSIVDKASDFTGSATSNARYKLLRQVWV", "length": 669, "header": "tr|Q9SLC7-1|Q9SLC7_ARATH Isoform 1 of Nucleolar protein gar2-like protein OS=Arabidopsis thaliana OX=3702 GN=MHK10.4 PE=1 SV=1 CANONICAL=Q9SLC7-1" }, "locus": { "chromosome": "2", "start_pos": 17627962, "end_pos": 17630797, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT2G42320.1", "url": "https://www.ensemblgenomes.org/id/AT2G42320.1" }, { "database": "Ensembl Peptide", "id": "AT2G42320.1", "url": "https://www.ensemblgenomes.org/id/AT2G42320.1" } ] } } ], "glycosylation": [], "phosphorylation": [ { "start_pos": 110, "end_pos": 110, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "A0A1P8B2E0", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A0A1P8B2E0" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "iPTMnet", "id": "Q9SLC7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SLC7" } ], "site_lbl": "Ser110" }, { "start_pos": 617, "end_pos": 617, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SLC7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SLC7" } ], "site_lbl": "Ser617" }, { "start_pos": 621, "end_pos": 621, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SLC7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SLC7" } ], "site_lbl": "Ser621" }, { "start_pos": 628, "end_pos": 628, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Tyr", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SLC7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SLC7" } ], "site_lbl": "Tyr628" }, { "start_pos": 629, "end_pos": 629, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Thr", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SLC7", "url": 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"MEVKESKIDMDDSVNKEIGELPKDMPCTSNYEDHSFHNHVEEDVTEDLPCGGDDIDADASIKKEVAEFDEDEVDILECNDNIEIQVSGCDDGTDGYSSSFGGTDSEHENDQEVDSMICNETSLPLWVRKRKLTDHWRRFVQPTLMWRCKWIELKYKELQNQAQKYDKEVEEYYQAKKLELENVKSEELGVKALPPLPCYTQKTRLMKRKTRKRVEETADVTSYASNHNLFSYYDCRKSLADIALNDNSRNLDKKNKSAKDETAFSEETPPLEFREGDAYLEQILLKIEAAKSEARNLKIRVDKVLSENPSIFPLANTVNPLGAADVYTSSEQQKPLLAIKNEDEKSIISEEKPVKSASVSSHHVSPEDDETTDILLSEILASKRREGKSIIPDKNLVKTEQASIEEGPSRPVRKRTPRNREIITKEESNPKRRRVSREKPKSNAVMASRFSNRKRKRGKRRSGSAGLRRRS", "length": 471, "header": "tr|Q9SZU4-1|Q9SZU4_ARATH Isoform 1 of Uncharacterized protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SZU4-1" }, "isoforms": [ { "isoform_ac": "A0A1P8B3M2-1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B3M2/entry", "sequence": { "sequence": "MEVKESKIDMDDSVNKEIGELPKDMPCTSNYEDHSFHNHVEEDVTEDLPCGGDDIDADASIKKEVAEFDEDEVDILECNDNIEIQVSGCDDGTDGYSSSFGGTDSEHENDQEVDSMICNETSLPLWVRKRKLTDHWRRFVQPTLMWRCKWIELKYKELQNQAQKYDKEVEEYYQAKKLELENVKSEELGVKALPPLPCYTQKTRLMKRKTRKRVEETADVTSYASNHNLFSYYDCRKSLADIALNDNSRNLDKKNKSAKDETAFSEETPPLEFREGDAYLEQILLKIEAAKSEARNLKIRVDKVLSENPSIFPLANTVNPLGAADVYTSSEQQKPLLAIKNEDEKSIISEEKPVKSASVSSHHVSPEDDETTDILLSEILASKRREGKSIIPDKNLVKTEQASIEEGPSRPVSFPLTQCNFAKPFWSHMPF", "length": 431, "header": "tr|A0A1P8B3M2-1|Q9SZU4_ARATH Computationally mapped isoform of Uncharacterized protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SZU4-1" }, "locus": { "chromosome": "4", "start_pos": 17601204, "end_pos": 17604086, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT4G37440.3", "url": "https://www.ensemblgenomes.org/id/AT4G37440.3" }, { "database": "Ensembl Peptide", "id": "AT4G37440.3", "url": "https://www.ensemblgenomes.org/id/AT4G37440.3" } ] } }, { "isoform_ac": "A8MRY2-1", "url": "https://www.uniprot.org/uniprotkb/A8MRY2/entry", "sequence": { "sequence": "MEVKESKIDMDDSVNKEIGELPKDMPCTSNYEDHSFHNHVEEDVTEDLPCGGDDIDADASIKKEVAEFDEDEVDILECNDNIEIQVSGCDDGTDGYSSSFGGTDSEHENDQEVDSMICNETSLPLWVRKRKLTDHWRRFVQPTLMWRCKWIELKYKELQNQAQKYDKEVEEYYQAKKLELENVKSEELGVKALPPLPCYTQKTRLMKRKTRKRVEETADVTSYASNHNLFSYYDCRKSLADIALNDNSRNLDKKNKSAKDETAFSEETPPLEFREGDAYLEQILLKIEAAKSEARNLKIRVDKVLSENPSIFPLANTVNPLGAADVYTSSEQQKPLLAIKNEDEKSIISEEKPVKSASVSSHHVSPEDDETTDILLSEILASKRREGKSIIPDKNLVKTEQASIEEGPSRPVRKEHRAIVKSLRRKRVTQRGVGFQERSQSLML", "length": 444, "header": "tr|A8MRY2-1|Q9SZU4_ARATH Computationally mapped isoform of Uncharacterized protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SZU4-1" }, "locus": { "chromosome": "4", "start_pos": 17601222, "end_pos": 17604086, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT4G37440.2", "url": "https://www.ensemblgenomes.org/id/AT4G37440.2" }, { "database": "Ensembl Peptide", "id": "AT4G37440.2", "url": "https://www.ensemblgenomes.org/id/AT4G37440.2" } ] } }, { "isoform_ac": "Q9SZU4-1", "url": "https://www.uniprot.org/uniprotkb/Q9SZU4/entry", "sequence": { "sequence": "MEVKESKIDMDDSVNKEIGELPKDMPCTSNYEDHSFHNHVEEDVTEDLPCGGDDIDADASIKKEVAEFDEDEVDILECNDNIEIQVSGCDDGTDGYSSSFGGTDSEHENDQEVDSMICNETSLPLWVRKRKLTDHWRRFVQPTLMWRCKWIELKYKELQNQAQKYDKEVEEYYQAKKLELENVKSEELGVKALPPLPCYTQKTRLMKRKTRKRVEETADVTSYASNHNLFSYYDCRKSLADIALNDNSRNLDKKNKSAKDETAFSEETPPLEFREGDAYLEQILLKIEAAKSEARNLKIRVDKVLSENPSIFPLANTVNPLGAADVYTSSEQQKPLLAIKNEDEKSIISEEKPVKSASVSSHHVSPEDDETTDILLSEILASKRREGKSIIPDKNLVKTEQASIEEGPSRPVRKRTPRNREIITKEESNPKRRRVSREKPKSNAVMASRFSNRKRKRGKRRSGSAGLRRRS", "length": 471, "header": "tr|Q9SZU4-1|Q9SZU4_ARATH Isoform 1 of Uncharacterized protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SZU4-1" }, "locus": { "chromosome": "4", "start_pos": 17601185, "end_pos": 17604086, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT4G37440.1", "url": "https://www.ensemblgenomes.org/id/AT4G37440.1" }, { "database": "Ensembl Peptide", "id": "AT4G37440.1", "url": "https://www.ensemblgenomes.org/id/AT4G37440.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "1999", "authors": "Mayer K, Sch\u00fcller C, Wambutt R, Murphy G, Volckaert G, Pohl T, D\u00fcsterh\u00f6ft A, Stiekema W, Entian K D, Terryn N, Harris B, Ansorge W, Brandt P, Grivell L, Rieger M, Weichselgartner M, de Simone V, Obermaier B, Mache R, M\u00fcller M, Kreis M, Delseny M, Puigdomenech P, Watson M, Schmidtheini T, Reichert B, Portatelle D, Perez-Alonso M, Boutry M, Bancroft I, Vos P, Hoheisel J, Zimmermann W, Wedler H, Ridley P, Langham S A, McCullagh B, Bilham L, Robben J, Van der Schueren J, Grymonprez B, Chuang Y J, Vandenbussche F, Braeken M, Weltjens I, Voet M, Bastiaens I, Aert R, Defoor E, Weitzenegger T, Bothe G, Ramsperger U, Hilbert H, Braun M, Holzer E, Brandt A, Peters S, van Staveren M, Dirske W, Mooijman P, Klein Lankhorst R, Rose M, Hauf J, K\u00f6tter P, Berneiser S, Hempel S, Feldpausch M, Lamberth S, Van den Daele H, De Keyser A, Buysshaert C, Gielen J, Villarroel R, De Clercq R, Van Montagu M, Rogers J, Cronin A, Quail M, Bray-Allen S, Clark L, Doggett J, Hall S, Kay M, Lennard N, McLay K, Mayes R, Pettett A, Rajandream M A, Lyne M, Benes V, Rechmann S, Borkova D, Bl\u00f6cker H, Scharfe M, Grimm M, L\u00f6hnert T H, Dose S, de Haan M, Maarse A, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Fartmann B, Granderath K, Dauner D, Herzl A, Neumann S, Argiriou A, Vitale D, Liguori R, Piravandi E, Massenet O, Quigley F, Clabauld G, M\u00fcndlein A, Felber R, Schnabl S, Hiller R, Schmidt W, Lecharny A, Aubourg S, Chefdor F, Cooke R, Berger C, Montfort A, Casacuberta E, Gibbons T, Weber N, Vandenbol M, Bargues M, Terol J, Torres A, Perez-Perez A, Purnelle B, Bent E, Johnson S, Tacon D, Jesse T, Heijnen L, Schwarz S, Scholler P, Heber S, Francs P, Bielke C, Frishman D, Haase D, Lemcke K, Mewes H W, Stocker S, Zaccaria P, Bevan M, Wilson R K, de la Bastide M, Habermann K, Parnell L, Dedhia N, Gnoj L, Schutz K, Huang E, Spiegel L, Sehkon M, Murray J, Sheet P, Cordes M, Abu-Threideh J, Stoneking T, Kalicki J, Graves T, Harmon G, Edwards J, Latreille P, Courtney L, Cloud J, Abbott A, Scott K, Johnson D, Minx P, Bentley D, Fulton B, Miller N, Greco T, Kemp K, Kramer J, Fulton L, Mardis E, Dante M, Pepin K, Hillier L, Nelson J, Spieth J, Ryan E, Andrews S, Geisel C, Layman D, Du H, Ali J, Berghoff A, Jones K, Drone K, Cotton M, Joshu C, Antonoiu B, Zidanic M, Strong C, Sun H, Lamar B, Yordan C, Ma P, Zhong J, Preston R, Vil D, Shekher M, Matero A, Shah R, Swaby I K, O'Shaughnessy A, Rodriguez M, Hoffmann J, Till S, Granat S, Shohdy N, Hasegawa A, Hameed A, Lodhi M, Johnson A, Chen E, Marra M, Martienssen R, McCombie W R", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8B3M2", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B3M2" } ], "reference": [ { "type": "PubMed", "id": "10617198", "url": "https://glygen.org/publication/PubMed/10617198" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8B3M2", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B3M2" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT4G37440", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT4G37440", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q9SZU4", "url": "https://www.uniprot.org/uniprotkb/Q9SZU4" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 119, "end_pos": 121, "annotation": "n_glycosylation_sequon" }, { "start_pos": 255, "end_pos": 257, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 119, "end_pos": 121 }, { "start_pos": 255, "end_pos": 257 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "Q9SST1-1", "uniprot_ac": "Q9SST1", "uniprot_id": "Q9SST1_ARATH", "mass": { "chemical_mass": 81270.0, "monoisotopic_mass": 81270.0 }, "refseq": { "ac": "NP_192701", "name": "transmembrane protein (DUF616)", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_192701" }, "gene_names": [ { "name": "T25P22.70", "type": "synonym", "evidence": [ { "id": "NP_192701", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_192701" }, { "id": "Q9SST1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SST1" } ] }, { "name": "T25P22_70", "type": "synonym", "evidence": [ { "id": "NP_192701", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_192701" }, { "id": "Q9SST1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SST1" } ] } ], "protein_names": [ { "name": "Transmembrane protein (DUF616)", "type": "synonym", "evidence": [ { "id": "Q9SST1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SST1/entry#names_and_taxonomy" } ] }, { "name": "transmembrane protein (DUF616)", "type": "synonym", "evidence": [ { "id": "NP_192701", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_192701" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9SST1", "url": "https://www.uniprot.org/uniprotkb/Q9SST1" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9SST1", "locus": {} } ], "crossref": [ { "id": "AT4G09630", "url": "https://bar.utoronto.ca/thalemine/portal.do?externalids=AT4G09630", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "826549", "url": "https://www.ncbi.nlm.nih.gov/gene/826549", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR006852", "url": "https://www.ebi.ac.uk/interpro/entry/IPR006852", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR048354", "url": "https://www.ebi.ac.uk/interpro/entry/IPR048354", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT4G09630", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT4G09630", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "DNHRHNE", "url": "https://omabrowser.org/oma/group/DNHRHNE/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR12956", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12956", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR12956:SF24", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12956:SF24", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF04765", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF04765", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_192701", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_192701", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT4G09630", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT4G09630", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "A0A1P8B3Q2", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B3Q2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A1P8B3Q2-1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B3Q2-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9SST1", "url": "https://www.uniprot.org/uniprotkb/Q9SST1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9SST1-1", "url": "https://www.uniprot.org/uniprotkb/Q9SST1-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MAQYRQSGTERFLGGRSGYNPYVNGGASSDHVAIGIRNGGGSNFGVVTQHGKASRWRRSTRLDRNRRCGVGSLVFVLCVVLVVCVSAYYYFSGYTNFGKDDKGIDTAEGDFLTNVSRTDPLKILKFGHGSVLHGRDSRDWDKDDRRRDEDYNEDDVEDKSVVEERSVSEVKKDVSLRNPLKGSDWKGVGFYNEAGRDELKKYEVEYQASLVKGGQSLKENDGHHQPFDTESNEDDSIDSHDTQGDEYVDMGHDGDENEESHKDNHKHNEDGAEESHKDSHRHNEDGAEESHKETASVFLHSTTKHQKIEKVHGATSKRSRGKSSLLSGKSGKTSQTDAKRRARSHRFSGVSCEMKLLNSSQQIQEPLKTQNFAAPSLQYIQMEDKPDGEEQWEPKFAGHQSLQEREDSFLVQEQKIHCGFVKAPEGLPSTGFDLTEDDANYISKCHIAVISCIFGNSDRLRHPANKMVSSLSRKDVCFVVFVDEITMQTLSAEGQVPDGAGFVGLWKLVVVRNLPYTDMRRVGKIPKLLPHRLFTSARYSIWLDSKLRLQLDPLVILEYFLWREGHEYAISNHYDRHCLWEEVAQNKKLNKYNHTVIDQQFEFYQSDGLTRFNASDPHKLLPSNVPEGSFIVREHTPMSNLFSCLWFNEVERFTPRDQLSFAYTYQKLTRMNPDTPFNLHMFKDCERRKITKLFRHRSEEKRNLIQAATTQ", "length": 711, "header": "tr|Q9SST1-1|Q9SST1_ARATH Isoform 1 of Transmembrane protein (DUF616) OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SST1-1" }, "isoforms": [ { "isoform_ac": "A0A1P8B3Q2-1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B3Q2/entry", "sequence": { "sequence": "MAQYRQSGTERFLGGRSGYNPYVNGGASSDHVAIGIRNGGGSNFGVVTQHGKASRWRRSTRLDRNRRCGVGSLVFVLCVVLVVCVSAYYYFSGYTNFGKDDKGIDTAEGDFLTNVSRTDPLKILKFGHGSVLHGRDSRDWDKDDRRRDEDYNEDDVEDKSVVEERSVSEVKKDVSLRNPLKGSDWKGVGFYNEAGRDELKKYEVEYQASLVKGGQSLKENDGHHQPFDTESNEDDSIDSHDTQGDEYVDMGHDGDENEESHKDNHKHNEDGAEESHKETASVFLHSTTKHQKIEKVHGATSKRSRGKSSLLSGKSGKTSQTDAKRRARSHRFSGVSCEMKLLNSSQQIQEPLKTQNFAAPSLQYIQMEDKPDGEEQWEPKFAGHQSLQEREDSFLVQEQKIHCGFVKAPEGLPSTGFDLTEDDANYISKCHIAVISCIFGNSDRLRHPANKMVSSLSRKDVCFVVFVDEITMQTLSAEGQVPDGAGFVGLWKLVVVRNLPYTDMRRVGKIPKLLPHRLFTSARYSIWLDSKLRLQLDPLVILEYFLWREGHEYAISNHYDRHCLWEEVAQNKKLNKYNHTVIDQQFEFYQSDGLTRFNASDPHKLLPSNVPEGSFIVREHTPMSNLFSCLWFNEVERFTPRDQLSFAYTYQKLTRMNPDTPFNLHMFKDCERRKITKLFRHRSEEKRNLIQAATTQ", "length": 696, "header": "tr|A0A1P8B3Q2-1|Q9SST1_ARATH Computationally mapped isoform of Transmembrane protein (DUF616) OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SST1-1" }, "locus": { "chromosome": "4", "start_pos": 6083709, "end_pos": 6088134, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT4G09630.2", "url": "https://www.ensemblgenomes.org/id/AT4G09630.2" }, { "database": "Ensembl Peptide", "id": "AT4G09630.2", "url": "https://www.ensemblgenomes.org/id/AT4G09630.2" } ] } }, { "isoform_ac": "Q9SST1-1", "url": "https://www.uniprot.org/uniprotkb/Q9SST1/entry", "sequence": { "sequence": "MAQYRQSGTERFLGGRSGYNPYVNGGASSDHVAIGIRNGGGSNFGVVTQHGKASRWRRSTRLDRNRRCGVGSLVFVLCVVLVVCVSAYYYFSGYTNFGKDDKGIDTAEGDFLTNVSRTDPLKILKFGHGSVLHGRDSRDWDKDDRRRDEDYNEDDVEDKSVVEERSVSEVKKDVSLRNPLKGSDWKGVGFYNEAGRDELKKYEVEYQASLVKGGQSLKENDGHHQPFDTESNEDDSIDSHDTQGDEYVDMGHDGDENEESHKDNHKHNEDGAEESHKDSHRHNEDGAEESHKETASVFLHSTTKHQKIEKVHGATSKRSRGKSSLLSGKSGKTSQTDAKRRARSHRFSGVSCEMKLLNSSQQIQEPLKTQNFAAPSLQYIQMEDKPDGEEQWEPKFAGHQSLQEREDSFLVQEQKIHCGFVKAPEGLPSTGFDLTEDDANYISKCHIAVISCIFGNSDRLRHPANKMVSSLSRKDVCFVVFVDEITMQTLSAEGQVPDGAGFVGLWKLVVVRNLPYTDMRRVGKIPKLLPHRLFTSARYSIWLDSKLRLQLDPLVILEYFLWREGHEYAISNHYDRHCLWEEVAQNKKLNKYNHTVIDQQFEFYQSDGLTRFNASDPHKLLPSNVPEGSFIVREHTPMSNLFSCLWFNEVERFTPRDQLSFAYTYQKLTRMNPDTPFNLHMFKDCERRKITKLFRHRSEEKRNLIQAATTQ", "length": 711, "header": "tr|Q9SST1-1|Q9SST1_ARATH Isoform 1 of Transmembrane protein (DUF616) OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SST1-1" }, "locus": { "chromosome": "4", "start_pos": 6083585, "end_pos": 6088134, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT4G09630.1", "url": "https://www.ensemblgenomes.org/id/AT4G09630.1" }, { "database": "Ensembl Peptide", "id": "AT4G09630.1", "url": "https://www.ensemblgenomes.org/id/AT4G09630.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "1999", "authors": "Mayer K, Sch\u00fcller C, Wambutt R, Murphy G, Volckaert G, Pohl T, D\u00fcsterh\u00f6ft A, Stiekema W, Entian K D, Terryn N, Harris B, Ansorge W, Brandt P, Grivell L, Rieger M, Weichselgartner M, de Simone V, Obermaier B, Mache R, M\u00fcller M, Kreis M, Delseny M, Puigdomenech P, Watson M, Schmidtheini T, Reichert B, Portatelle D, Perez-Alonso M, Boutry M, Bancroft I, Vos P, Hoheisel J, Zimmermann W, Wedler H, Ridley P, Langham S A, McCullagh B, Bilham L, Robben J, Van der Schueren J, Grymonprez B, Chuang Y J, Vandenbussche F, Braeken M, Weltjens I, Voet M, Bastiaens I, Aert R, Defoor E, Weitzenegger T, Bothe G, Ramsperger U, Hilbert H, Braun M, Holzer E, Brandt A, Peters S, van Staveren M, Dirske W, Mooijman P, Klein Lankhorst R, Rose M, Hauf J, K\u00f6tter P, Berneiser S, Hempel S, Feldpausch M, Lamberth S, Van den Daele H, De Keyser A, Buysshaert C, Gielen J, Villarroel R, De Clercq R, Van Montagu M, Rogers J, Cronin A, Quail M, Bray-Allen S, Clark L, Doggett J, Hall S, Kay M, Lennard N, McLay K, Mayes R, Pettett A, Rajandream M A, Lyne M, Benes V, Rechmann S, Borkova D, Bl\u00f6cker H, Scharfe M, Grimm M, L\u00f6hnert T H, Dose S, de Haan M, Maarse A, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Fartmann B, Granderath K, Dauner D, Herzl A, Neumann S, Argiriou A, Vitale D, Liguori R, Piravandi E, Massenet O, Quigley F, Clabauld G, M\u00fcndlein A, Felber R, Schnabl S, Hiller R, Schmidt W, Lecharny A, Aubourg S, Chefdor F, Cooke R, Berger C, Montfort A, Casacuberta E, Gibbons T, Weber N, Vandenbol M, Bargues M, Terol J, Torres A, Perez-Perez A, Purnelle B, Bent E, Johnson S, Tacon D, Jesse T, Heijnen L, Schwarz S, Scholler P, Heber S, Francs P, Bielke C, Frishman D, Haase D, Lemcke K, Mewes H W, Stocker S, Zaccaria P, Bevan M, Wilson R K, de la Bastide M, Habermann K, Parnell L, Dedhia N, Gnoj L, Schutz K, Huang E, Spiegel L, Sehkon M, Murray J, Sheet P, Cordes M, Abu-Threideh J, Stoneking T, Kalicki J, Graves T, Harmon G, Edwards J, Latreille P, Courtney L, Cloud J, Abbott A, Scott K, Johnson D, Minx P, Bentley D, Fulton B, Miller N, Greco T, Kemp K, Kramer J, Fulton L, Mardis E, Dante M, Pepin K, Hillier L, Nelson J, Spieth J, Ryan E, Andrews S, Geisel C, Layman D, Du H, Ali J, Berghoff A, Jones K, Drone K, Cotton M, Joshu C, Antonoiu B, Zidanic M, Strong C, Sun H, Lamar B, Yordan C, Ma P, Zhong J, Preston R, Vil D, Shekher M, Matero A, Shah R, Swaby I K, O'Shaughnessy A, Rodriguez M, Hoffmann J, Till S, Granat S, Shohdy N, Hasegawa A, Hameed A, Lodhi M, Johnson A, Chen E, Marra M, Martienssen R, McCombie W R", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8B3Q2", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B3Q2" } ], "reference": [ { "type": "PubMed", "id": "10617198", "url": "https://glygen.org/publication/PubMed/10617198" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8B3Q2", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B3Q2" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT4G09630", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT4G09630", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q9SST1", "url": "https://www.uniprot.org/uniprotkb/Q9SST1" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 114, "end_pos": 116, "annotation": "n_glycosylation_sequon" }, { "start_pos": 358, "end_pos": 360, "annotation": "n_glycosylation_sequon" }, { "start_pos": 593, "end_pos": 595, "annotation": "n_glycosylation_sequon" }, { "start_pos": 613, "end_pos": 615, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "Q9SST1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SST1" }, { "id": "PF04765", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF04765" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "TOD1/MUCI70 glycosyltransferase-like", "eco_id": "ECO_0000259", "start_pos": 377, "end_pos": 696, "start_aa": "Leu", "end_aa": "His", "glycosite_overlap": [] } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 114, "end_pos": 116 }, { "start_pos": 358, "end_pos": 360 }, { "start_pos": 593, "end_pos": 595 }, { "start_pos": 613, "end_pos": 615 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "Q9STM8-1", "uniprot_ac": "Q9STM8", "uniprot_id": "Q9STM8_ARATH", "mass": { "chemical_mass": 57333.0, "monoisotopic_mass": 57333.0 }, "refseq": { "ac": "NP_192580", "name": "Proline-rich extensin-like family protein", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_192580" }, "gene_names": [ { "name": "EXT7", "type": "recommended", "evidence": [ { "id": "Q9STM8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9STM8" } ] }, { "name": "T28D5.90", "type": "synonym", "evidence": [ { "id": "NP_192580", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_192580" }, { "id": "Q9STM8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9STM8" } ] }, { "name": "T28D5_90", "type": "synonym", "evidence": [ { "id": "NP_192580", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_192580" }, { "id": "Q9STM8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9STM8" } ] } ], "protein_names": [ { "name": "Proline-rich extensin-like family protein", "type": "synonym", "evidence": [ { "id": "NP_192580", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_192580" }, { "id": "Q9STM8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9STM8/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9STM8", "url": "https://www.uniprot.org/uniprotkb/Q9STM8" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "EXT7", "url": "https://www.uniprot.org/uniprotkb/Q9STM8", "locus": {} } ], "crossref": [ { "id": "AT4G08400", "url": "https://bar.utoronto.ca/thalemine/portal.do?externalids=AT4G08400", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "826398", "url": "https://www.ncbi.nlm.nih.gov/gene/826398", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR006706", "url": "https://www.ebi.ac.uk/interpro/entry/IPR006706", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT4G08400", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT4G08400", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "PPWRWSQ", "url": "https://omabrowser.org/oma/group/PPWRWSQ/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR36586", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR36586", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR36586:SF47", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR36586:SF47", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF04554", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF04554", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_192580", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_192580", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT4G08400", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT4G08400", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "A0A1P8B3U5", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B3U5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A1P8B3U5-1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B3U5-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A1P8B3U6", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B3U6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A1P8B3U6-1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B3U6-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9STM8", "url": "https://www.uniprot.org/uniprotkb/Q9STM8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9STM8-1", "url": "https://www.uniprot.org/uniprotkb/Q9STM8-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MGVIRTSRTMGLGQCMVYVVVLSAIAATVTSYPYTSPQTPHYNSPSHEHKIPKYTPHPKPSIYSSSPPPSYYSPSPKVDYKSPPPSYVYSSPPPPYYSPSPKVDYKSLPPPYVYSSPPPPYYSPSPKVNYKSPPPPYVYSSPPPPYYSPSPKGDYKSPPPPYVYSSPPPPYYSPSPKVDYKSPPPPYVYSSPPPPYYSPTPKVDYKSPPPPYVYSSPPPPYYSPSPKVDYKSPPPPYVYSSPPPPYYSPSPKVNYKSPPPPYYRSPPPPYYSPSPKVDYKSPPPPYVYSSPPPPYYSPSPKVDYKSPPPPYVYSSPPPPYYSPTPKVDYKSPPPPYVYSSPPPPYYSPSPKVDYKSPPPPYVYSSPPPPYYSPSPKVDYKSPPPPYVYNSPPPPYYSPSPKVDYKSPPPPYIYNSPPPPYYSPSPKVNYKTPPPPYVYSSPPPPYYSPSPKVNYKSPPPPYVYSSPPPPYYSPSPNVDYKSPPPPYVYSSPPTPYYSPSSKVTYKSPPPPYVY", "length": 513, "header": "tr|Q9STM8-1|Q9STM8_ARATH Isoform 1 of Proline-rich extensin-like family protein OS=Arabidopsis thaliana OX=3702 GN=EXT7 PE=4 SV=1 CANONICAL=Q9STM8-1" }, "isoforms": [ { "isoform_ac": "A0A1P8B3U5-1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B3U5/entry", "sequence": { "sequence": "MGVIRTSRTMGLGQCMVYVVVLSAIAATVTSYPYTSPQTPHYNSPSHEHKIPKYTPHPKPSIYSSSPPPSYYSPSPKVDYKSPPPPYVYSSPPPPYYSPTPKVDYKSPPPPYVYSSPPPPYYSPSPKVDYKSPPPPYVYSSPPPPYYSPSPKVNYKSPPPPYYRSPPPPYYSPSPKVDYKSPPPPYVYSSPPPPYYSPSPKVDYKSPPPPYVYSSPPPPYYSPTPKVDYKSPPPPYVYSSPPPPYYSPSPKVDYKSPPPPYVYSSPPPPYYSPSPKVDYKSPPPPYVYNSPPPPYYSPSPKVDYKSPPPPYIYNSPPPPYYSPSPKVNYKTPPPPYVYSSPPPPYYSPSPKVNYKSPPPPYVYSSPPPPYYSPSPNVDYKSPPPPYVYSSPPTPYYSPSSKVTYKSPPPPYVY", "length": 413, "header": "tr|A0A1P8B3U5-1|Q9STM8_ARATH Computationally mapped isoform of Proline-rich extensin-like family protein OS=Arabidopsis thaliana OX=3702 GN=EXT7 PE=4 SV=1 CANONICAL=Q9STM8-1" }, "locus": { "chromosome": "4", "start_pos": 5323800, "end_pos": 5325374, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT4G08400.2", "url": "https://www.ensemblgenomes.org/id/AT4G08400.2" }, { "database": "Ensembl Peptide", "id": "AT4G08400.2", "url": "https://www.ensemblgenomes.org/id/AT4G08400.2" } ] } }, { "isoform_ac": "A0A1P8B3U6-1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B3U6/entry", "sequence": { "sequence": "MGVIRTSRTMGLGQCMVYVVVLSAIAATVTSYPYTSPQTPHYNSPSHEHKIPKYTPHPKPSIYSSSPPPSYYSPSPKVNYKSPPPPYVYSSPPPPYYSPSPNVDYKSPPPPYVYSSPPTPYYSPSSKVTYKSPPPPYVY", "length": 139, "header": "tr|A0A1P8B3U6-1|Q9STM8_ARATH Computationally mapped isoform of Proline-rich extensin-like family protein OS=Arabidopsis thaliana OX=3702 GN=EXT7 PE=4 SV=1 CANONICAL=Q9STM8-1" }, "locus": { "chromosome": "4", "start_pos": 5323800, "end_pos": 5325363, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT4G08400.3", "url": "https://www.ensemblgenomes.org/id/AT4G08400.3" }, { "database": "Ensembl Peptide", "id": "AT4G08400.3", "url": "https://www.ensemblgenomes.org/id/AT4G08400.3" } ] } }, { "isoform_ac": "Q9STM8-1", "url": "https://www.uniprot.org/uniprotkb/Q9STM8/entry", "sequence": { "sequence": "MGVIRTSRTMGLGQCMVYVVVLSAIAATVTSYPYTSPQTPHYNSPSHEHKIPKYTPHPKPSIYSSSPPPSYYSPSPKVDYKSPPPSYVYSSPPPPYYSPSPKVDYKSLPPPYVYSSPPPPYYSPSPKVNYKSPPPPYVYSSPPPPYYSPSPKGDYKSPPPPYVYSSPPPPYYSPSPKVDYKSPPPPYVYSSPPPPYYSPTPKVDYKSPPPPYVYSSPPPPYYSPSPKVDYKSPPPPYVYSSPPPPYYSPSPKVNYKSPPPPYYRSPPPPYYSPSPKVDYKSPPPPYVYSSPPPPYYSPSPKVDYKSPPPPYVYSSPPPPYYSPTPKVDYKSPPPPYVYSSPPPPYYSPSPKVDYKSPPPPYVYSSPPPPYYSPSPKVDYKSPPPPYVYNSPPPPYYSPSPKVDYKSPPPPYIYNSPPPPYYSPSPKVNYKTPPPPYVYSSPPPPYYSPSPKVNYKSPPPPYVYSSPPPPYYSPSPNVDYKSPPPPYVYSSPPTPYYSPSSKVTYKSPPPPYVY", "length": 513, "header": "tr|Q9STM8-1|Q9STM8_ARATH Isoform 1 of Proline-rich extensin-like family protein OS=Arabidopsis thaliana OX=3702 GN=EXT7 PE=4 SV=1 CANONICAL=Q9STM8-1" }, "locus": { "chromosome": "4", "start_pos": 5323606, "end_pos": 5325372, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT4G08400.1", "url": "https://www.ensemblgenomes.org/id/AT4G08400.1" }, { "database": "Ensembl Peptide", "id": "AT4G08400.1", "url": "https://www.ensemblgenomes.org/id/AT4G08400.1" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "other", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 200, "start_aa": "Thr", "end_pos": 200, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr200", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ], "filter_code": "000000000000000010000.00000000001000.0.01000" }, { "glytoucan_ac": "", "type": "O-linked", "subtype": "other", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 324, "start_aa": "Thr", "end_pos": 324, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr324", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ], "filter_code": "000000000000000010000.00000000001000.0.01000" } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "1999", "authors": "Mayer K, Sch\u00fcller C, Wambutt R, Murphy G, Volckaert G, Pohl T, D\u00fcsterh\u00f6ft A, Stiekema W, Entian K D, Terryn N, Harris B, Ansorge W, Brandt P, Grivell L, Rieger M, Weichselgartner M, de Simone V, Obermaier B, Mache R, M\u00fcller M, Kreis M, Delseny M, Puigdomenech P, Watson M, Schmidtheini T, Reichert B, Portatelle D, Perez-Alonso M, Boutry M, Bancroft I, Vos P, Hoheisel J, Zimmermann W, Wedler H, Ridley P, Langham S A, McCullagh B, Bilham L, Robben J, Van der Schueren J, Grymonprez B, Chuang Y J, Vandenbussche F, Braeken M, Weltjens I, Voet M, Bastiaens I, Aert R, Defoor E, Weitzenegger T, Bothe G, Ramsperger U, Hilbert H, Braun M, Holzer E, Brandt A, Peters S, van Staveren M, Dirske W, Mooijman P, Klein Lankhorst R, Rose M, Hauf J, K\u00f6tter P, Berneiser S, Hempel S, Feldpausch M, Lamberth S, Van den Daele H, De Keyser A, Buysshaert C, Gielen J, Villarroel R, De Clercq R, Van Montagu M, Rogers J, Cronin A, Quail M, Bray-Allen S, Clark L, Doggett J, Hall S, Kay M, Lennard N, McLay K, Mayes R, Pettett A, Rajandream M A, Lyne M, Benes V, Rechmann S, Borkova D, Bl\u00f6cker H, Scharfe M, Grimm M, L\u00f6hnert T H, Dose S, de Haan M, Maarse A, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Fartmann B, Granderath K, Dauner D, Herzl A, Neumann S, Argiriou A, Vitale D, Liguori R, Piravandi E, Massenet O, Quigley F, Clabauld G, M\u00fcndlein A, Felber R, Schnabl S, Hiller R, Schmidt W, Lecharny A, Aubourg S, Chefdor F, Cooke R, Berger C, Montfort A, Casacuberta E, Gibbons T, Weber N, Vandenbol M, Bargues M, Terol J, Torres A, Perez-Perez A, Purnelle B, Bent E, Johnson S, Tacon D, Jesse T, Heijnen L, Schwarz S, Scholler P, Heber S, Francs P, Bielke C, Frishman D, Haase D, Lemcke K, Mewes H W, Stocker S, Zaccaria P, Bevan M, Wilson R K, de la Bastide M, Habermann K, Parnell L, Dedhia N, Gnoj L, Schutz K, Huang E, Spiegel L, Sehkon M, Murray J, Sheet P, Cordes M, Abu-Threideh J, Stoneking T, Kalicki J, Graves T, Harmon G, Edwards J, Latreille P, Courtney L, Cloud J, Abbott A, Scott K, Johnson D, Minx P, Bentley D, Fulton B, Miller N, Greco T, Kemp K, Kramer J, Fulton L, Mardis E, Dante M, Pepin K, Hillier L, Nelson J, Spieth J, Ryan E, Andrews S, Geisel C, Layman D, Du H, Ali J, Berghoff A, Jones K, Drone K, Cotton M, Joshu C, Antonoiu B, Zidanic M, Strong C, Sun H, Lamar B, Yordan C, Ma P, Zhong J, Preston R, Vil D, Shekher M, Matero A, Shah R, Swaby I K, O'Shaughnessy A, Rodriguez M, Hoffmann J, Till S, Granat S, Shohdy N, Hasegawa A, Hameed A, Lodhi M, Johnson A, Chen E, Marra M, Martienssen R, McCombie W R", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8B3U5", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B3U5" } ], "reference": [ { "type": "PubMed", "id": "10617198", "url": "https://glygen.org/publication/PubMed/10617198" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8B3U5", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B3U5" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT4G08400", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT4G08400", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "structural constituent of cell wall", "id": "GO:0005199", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005199", "evidence": [ { "database": "UniProtKB", "id": "Q9STM8", "url": "https://www.uniprot.org/uniprotkb/Q9STM8" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "plant-type cell wall organization", "id": "GO:0009664", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009664", "evidence": [ { "database": "UniProtKB", "id": "Q9STM8", "url": "https://www.uniprot.org/uniprotkb/Q9STM8" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "Q9STM8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9STM8" }, { "id": "PF04554", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF04554" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Extensin", "eco_id": "ECO_0000259", "start_pos": 87, "end_pos": 136, "start_aa": "Tyr", "end_aa": "Pro", "glycosite_overlap": [] } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [ 200, 324 ], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 2 }, { "field": "total_sites", "count": 2 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 2 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": 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"end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "Q9T0B0-1", "uniprot_ac": "Q9T0B0", "uniprot_id": "FB335_ARATH", "mass": { "chemical_mass": 14067.0, "monoisotopic_mass": 14067.0 }, "refseq": {}, "gene_names": [ { "name": "T32A16.130", "type": "synonym", "evidence": [ { "id": "Q9T0B0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9T0B0" } ] }, { "name": "T32A16_130", "type": "synonym", "evidence": [ { "id": "Q9T0B0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9T0B0" } ] } ], "protein_names": [ { "name": "Probable F-box protein At4g23960", "type": "recommended", "evidence": [ { "id": "Q9T0B0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9T0B0/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9T0B0", "url": "https://www.uniprot.org/uniprotkb/Q9T0B0" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9T0B0", "locus": {} } ], "crossref": [ { "id": "Q9T0B0", "url": "https://alphafold.ebi.ac.uk/entry/Q9T0B0", "database": "AlphaFoldDB", "categories": [] }, { "id": "AT4G23960", "url": "https://bar.utoronto.ca/thalemine/portal.do?externalids=AT4G23960", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "cd22117", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd22117", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "828496", "url": "https://www.ncbi.nlm.nih.gov/gene/828496", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR001810", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001810", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR032710", "url": "https://www.ebi.ac.uk/interpro/entry/IPR032710", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036047", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036047", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR037401", "url": "https://www.ebi.ac.uk/interpro/entry/IPR037401", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR044260", "url": "https://www.ebi.ac.uk/interpro/entry/IPR044260", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT4G23960", "url": 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"database": "PRO", "categories": [ "Protein" ] }, { "id": "AT4G23960", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT4G23960", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "A0A1P8B3V7", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B3V7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A1P8B3V7-1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B3V7-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9T0B0", "url": "https://www.uniprot.org/uniprotkb/Q9T0B0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9T0B0-1", "url": "https://www.uniprot.org/uniprotkb/Q9T0B0-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MIEQLFPEVTCYALRYLDYSSLCQLSMTSSSMRKTANDDVLWRALYFQEFTEETNGGTPVNGWKAFFAVTKQVMTVNDKFFSILDSRSLPRMTSLWLNSDYVKCFNGSGELFTGYLLTYPLL", "length": 122, "header": "sp|Q9T0B0-1|FB335_ARATH Isoform 1 of Probable F-box protein At4g23960 OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9T0B0-1" }, "isoforms": [ { "isoform_ac": "A0A1P8B3V7-1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B3V7/entry", "sequence": { "sequence": "MIEQLFPEVTCYALRYLDYSSLCQLSMTSSSMRKTANDDVLWRALYFQEFTEETNGGTPVNGWKAFFAVTKQVMTVNDKFFSILDSRSLPRMTSLWLNSDYVKCFNGSGELFTGFDAVMQRWDFCFDNWEIGFPTYVIESRTRILSSVAWVSTIALHHIGQFNITNVFELHNGRWLMVHHHSSIIPTNGVEN", "length": 192, "header": "tr|A0A1P8B3V7-1|FB335_ARATH Computationally mapped isoform of Probable F-box protein At4g23960 OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9T0B0-1" }, "locus": { "chromosome": "4", "start_pos": 12444765, "end_pos": 12445904, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT4G23960.2", "url": "https://www.ensemblgenomes.org/id/AT4G23960.2" }, { "database": "Ensembl Peptide", "id": "AT4G23960.2", "url": "https://www.ensemblgenomes.org/id/AT4G23960.2" } ] } }, { "isoform_ac": "Q9T0B0-1", "url": "https://www.uniprot.org/uniprotkb/Q9T0B0/entry#Q9T0B0-1", "sequence": { "sequence": "MIEQLFPEVTCYALRYLDYSSLCQLSMTSSSMRKTANDDVLWRALYFQEFTEETNGGTPVNGWKAFFAVTKQVMTVNDKFFSILDSRSLPRMTSLWLNSDYVKCFNGSGELFTGYLLTYPLL", "length": 122, "header": "sp|Q9T0B0-1|FB335_ARATH Isoform 1 of Probable F-box protein At4g23960 OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9T0B0-1" }, "locus": { "chromosome": "4", "start_pos": 12444765, "end_pos": 12445323, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT4G23960.1", "url": "https://www.ensemblgenomes.org/id/AT4G23960.1" }, { "database": "Ensembl Peptide", "id": "AT4G23960.1", "url": "https://www.ensemblgenomes.org/id/AT4G23960.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "1999", "authors": "Mayer K, Sch\u00fcller C, Wambutt R, Murphy G, Volckaert G, Pohl T, D\u00fcsterh\u00f6ft A, Stiekema W, Entian K D, Terryn N, Harris B, Ansorge W, Brandt P, Grivell L, Rieger M, Weichselgartner M, de Simone V, Obermaier B, Mache R, M\u00fcller M, Kreis M, Delseny M, Puigdomenech P, Watson M, Schmidtheini T, Reichert B, Portatelle D, Perez-Alonso M, Boutry M, Bancroft I, Vos P, Hoheisel J, Zimmermann W, Wedler H, Ridley P, Langham S A, McCullagh B, Bilham L, Robben J, Van der Schueren J, Grymonprez B, Chuang Y J, Vandenbussche F, Braeken M, Weltjens I, Voet M, Bastiaens I, Aert R, Defoor E, Weitzenegger T, Bothe G, Ramsperger U, Hilbert H, Braun M, Holzer E, Brandt A, Peters S, van Staveren M, Dirske W, Mooijman P, Klein Lankhorst R, Rose M, Hauf J, K\u00f6tter P, Berneiser S, Hempel S, Feldpausch M, Lamberth S, Van den Daele H, De Keyser A, Buysshaert C, Gielen J, Villarroel R, De Clercq R, Van Montagu M, Rogers J, Cronin A, Quail M, Bray-Allen S, Clark L, Doggett J, Hall S, Kay M, Lennard N, McLay K, Mayes R, Pettett A, Rajandream M A, Lyne M, Benes V, Rechmann S, Borkova D, Bl\u00f6cker H, Scharfe M, Grimm M, L\u00f6hnert T H, Dose S, de Haan M, Maarse A, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Fartmann B, Granderath K, Dauner D, Herzl A, Neumann S, Argiriou A, Vitale D, Liguori R, Piravandi E, Massenet O, Quigley F, Clabauld G, M\u00fcndlein A, Felber R, Schnabl S, Hiller R, Schmidt W, Lecharny A, Aubourg S, Chefdor F, Cooke R, Berger C, Montfort A, Casacuberta E, Gibbons T, Weber N, Vandenbol M, Bargues M, Terol J, Torres A, Perez-Perez A, Purnelle B, Bent E, Johnson S, Tacon D, Jesse T, Heijnen L, Schwarz S, Scholler P, Heber S, Francs P, Bielke C, Frishman D, Haase D, Lemcke K, Mewes H W, Stocker S, Zaccaria P, Bevan M, Wilson R K, de la Bastide M, Habermann K, Parnell L, Dedhia N, Gnoj L, Schutz K, Huang E, Spiegel L, Sehkon M, Murray J, Sheet P, Cordes M, Abu-Threideh J, Stoneking T, Kalicki J, Graves T, Harmon G, Edwards J, Latreille P, Courtney L, Cloud J, Abbott A, Scott K, Johnson D, Minx P, Bentley D, Fulton B, Miller N, Greco T, Kemp K, Kramer J, Fulton L, Mardis E, Dante M, Pepin K, Hillier L, Nelson J, Spieth J, Ryan E, Andrews S, Geisel C, Layman D, Du H, Ali J, Berghoff A, Jones K, Drone K, Cotton M, Joshu C, Antonoiu B, Zidanic M, Strong C, Sun H, Lamar B, Yordan C, Ma P, Zhong J, Preston R, Vil D, Shekher M, Matero A, Shah R, Swaby I K, O'Shaughnessy A, Rodriguez M, Hoffmann J, Till S, Granat S, Shohdy N, Hasegawa A, Hameed A, Lodhi M, Johnson A, Chen E, Marra M, Martienssen R, McCombie W R", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8B3V7", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B3V7" } ], "reference": [ { "type": "PubMed", "id": "10617198", "url": "https://glygen.org/publication/PubMed/10617198" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8B3V7", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B3V7" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT4G23960", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT4G23960", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "Q9T0B0", "url": "https://www.uniprot.org/uniprotkb/Q9T0B0" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 106, "end_pos": 108, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-Q9T0B0-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 122, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-Q9T0B0-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/Q9T0B0" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "Q9T0B0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9T0B0" }, { "id": "PRU00080", "database": "PROSITE", "url": "https://prosite.expasy.org/PRU00080" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "F-box", "eco_id": "ECO_0000255", "start_pos": 1, "end_pos": 45, "start_aa": "Met", "end_aa": "Leu", "glycosite_overlap": [] } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 106, "end_pos": 108 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "Q9SU31-1", "uniprot_ac": "Q9SU31", "uniprot_id": "Q9SU31_ARATH", "mass": { "chemical_mass": 52065.0, "monoisotopic_mass": 52065.0 }, "refseq": {}, "gene_names": [ { "name": "T1P17.130", "type": "synonym", "evidence": [ { "id": "Q9SU31", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SU31" } ] }, { "name": "T1P17_130", "type": "synonym", "evidence": [ { "id": "Q9SU31", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SU31" } ] } ], "protein_names": [ { "name": "Uncharacterized protein", "type": "synonym", "evidence": [ { "id": "Q9SU31", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SU31/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9SU31", "url": "https://www.uniprot.org/uniprotkb/Q9SU31" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9SU31", "locus": {} } ], "crossref": [ { "id": "AT4G12540", "url": "https://bar.utoronto.ca/thalemine/portal.do?externalids=AT4G12540", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "826866", "url": "https://www.ncbi.nlm.nih.gov/gene/826866", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "ath:AT4G12540", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT4G12540", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "PSSEYNC", "url": "https://omabrowser.org/oma/group/PSSEYNC/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR37238", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR37238", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR37238:SF1", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR37238:SF1", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "AT4G12540", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT4G12540", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "A0A1P8B408", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B408", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A1P8B408-1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B408-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A1P8B412", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B412", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A1P8B412-1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B412-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A1P8B435", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B435", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A1P8B435-1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B435-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9SU31", "url": "https://www.uniprot.org/uniprotkb/Q9SU31", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9SU31-1", "url": "https://www.uniprot.org/uniprotkb/Q9SU31-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MEPYITRRDTVNQVLHAEEEEEYNDCELDQLFLVHSDIRSVLLQIDELVVEATKRKTVSKHGLIEVESFRTVLSDMLSSLKVSFLLHLLFLNLFLRMQPWFPRLQEAMSDFQLLPEDQEEQSLMSTNEEEDLFDVESPEPTQFEPLVSPSPLVHWRGDHNADKGRQLFLLTPLPLGKSEFLKHQNASKLTAKRIFPDTVANEPLEASKETSDDVLGGESLKTAGLGKSLVHAMDFSENLVEYKPCSSPVLRRKILSELLMTPCLKLSPPKSCTMFKPVPESSQLGKQGACKSTCSELGSSGIEKTDNLCSKYPELLGIQHAPITRKTDLESSPVWWFSPPKTCVLMEPVNEKKPIDETGGSFDVPNIIPEAKHTTEGSMSMVVESTPLFKEPESIMTRNRTKAGESTLKKELWTRFEEATIHDSRFNSMTTTTTVRGNNKKCFMEMLEEVSGNEEDHELSV", "length": 461, "header": "tr|Q9SU31-1|Q9SU31_ARATH Isoform 1 of Uncharacterized protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SU31-1" }, "isoforms": [ { "isoform_ac": "A0A1P8B408-1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B408/entry", "sequence": { "sequence": "MEPYITRRDTEEEEEYNDCELDQLFLVHSDIRSVLLQIDELVVEATKRKTVSKHGLIEVESFRTVLSDMLSSLKPWFPRLQEAMSDFQLLPEDQEEQSLMSTNEEEDLFDVESPEPTQFEPLVSPSPLVHWRGDHNADKGRQLFLLTPLPLGKSEFLKHQNASKLTAKRIFPDTVANEPLEASKETSDDVLGGESLKTAGLGKSLVHAMDFSENLVEYKPCSSPVLRRKILSELLMTPCLKLSPPKSCTMFKPVPESSQLGKQGACKSTCSELGSSGIEKTDNLCSKYPELLGIQHAPITRKTDLESSPVWWFSPPKTCVLMEPVNEKKPIDETGGSFDVPNIIPEAKHTTEGSMSMVVESTPLFKEPESIMTRNRTKAGESTLKKELWTRFEEATIHDSRFNSMTTTTTVRGNNKKCFMEMLEEVSGNEEDHELSV", "length": 437, "header": "tr|A0A1P8B408-1|Q9SU31_ARATH Computationally mapped isoform of Uncharacterized protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SU31-1" }, "locus": { "chromosome": "4", "start_pos": 7429705, "end_pos": 7432027, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT4G12540.3", "url": "https://www.ensemblgenomes.org/id/AT4G12540.3" }, { "database": "Ensembl Peptide", "id": "AT4G12540.3", "url": "https://www.ensemblgenomes.org/id/AT4G12540.3" } ] } }, { "isoform_ac": "A0A1P8B412-1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B412/entry", "sequence": { "sequence": "MEPYITRRDTVNQVLHAEEEEEYNDCELDQLFLVHSDIRSVLLQIDELVVEATKRKTVSKHGLIEVESFRTVLSDMLSSLKPWFPRLQEAMSDFQLLPEDQEEQSLMSTNEEEDLFDVESPEPTQFEPLVSPSPLVHWRGDHNADKGRQLFLLTPLPLGKSEFLKHQNASKLTAKRIFPDTVANEPLEASKETSDDVLGGESLKTAGLGKSLVHAMDFSENLVEYKPCSSPVLRRKILSELLMTPCLKLSPPKSCTMFKPVPESSQLGKQGACKSTCSELGSSGIEKTDNLCSKYPELLGIQHAPITRKTDLESSPVWWFSPPKTCVLMEPVNEKKPIDETGGSFDVPNIIPEAKHTTEGSMSMVVESTPLFKEPESIMTRNRTKAGESTLKKELWTRFEEATIHDSRFNSMTTTTTVRGNNKKCFMEMLEEVSGNEEDHELSV", "length": 444, "header": "tr|A0A1P8B412-1|Q9SU31_ARATH Computationally mapped isoform of Uncharacterized protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SU31-1" }, "locus": { "chromosome": "4", "start_pos": 7429753, "end_pos": 7431602, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT4G12540.5", "url": "https://www.ensemblgenomes.org/id/AT4G12540.5" }, { "database": "Ensembl Peptide", "id": "AT4G12540.5", "url": "https://www.ensemblgenomes.org/id/AT4G12540.5" } ] } }, { "isoform_ac": "A0A1P8B435-1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B435/entry", "sequence": { "sequence": "MQKKKKNTMIVNWINSSLCILILDLFFSRNHILECQIDELVVEATKRKTVSKHGLIEVESFRTVLSDMLSSLKPWFPRLQEAMSDFQLLPEDQEEQSLMSTNEEEDLFDVESPEPTQFEPLVSPSPLVHWRGDHNADKGRQLFLLTPLPLGKSEFLKHQNASKLTAKRIFPDTVANEPLEASKETSDDVLGGESLKTAGLGKSLVHAMDFSENLVEYKPCSSPVLRRKILSELLMTPCLKLSPPKSCTMFKPVPESSQLGKQGACKSTCSELGSSGIEKTDNLCSKYPELLGIQHAPITRKTDLESSPVWWFSPPKTCVLMEPVNEKKPIDETGGSFDVPNIIPEAKHTTEGSMSMVVESTPLFKEPESIMTRNRTKAGESTLKKELWTRFEEATIHDSRFNSMTTTTTVRGNNKKCFMEMLEEVSGNEEDHELSV", "length": 436, "header": "tr|A0A1P8B435-1|Q9SU31_ARATH Computationally mapped isoform of Uncharacterized protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SU31-1" }, "locus": { "chromosome": "4", "start_pos": 7429713, "end_pos": 7432012, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT4G12540.4", "url": "https://www.ensemblgenomes.org/id/AT4G12540.4" }, { "database": "Ensembl Peptide", "id": "AT4G12540.4", "url": "https://www.ensemblgenomes.org/id/AT4G12540.4" } ] } }, { "isoform_ac": "Q9SU31-1", "url": "https://www.uniprot.org/uniprotkb/Q9SU31/entry", "sequence": { "sequence": "MEPYITRRDTVNQVLHAEEEEEYNDCELDQLFLVHSDIRSVLLQIDELVVEATKRKTVSKHGLIEVESFRTVLSDMLSSLKVSFLLHLLFLNLFLRMQPWFPRLQEAMSDFQLLPEDQEEQSLMSTNEEEDLFDVESPEPTQFEPLVSPSPLVHWRGDHNADKGRQLFLLTPLPLGKSEFLKHQNASKLTAKRIFPDTVANEPLEASKETSDDVLGGESLKTAGLGKSLVHAMDFSENLVEYKPCSSPVLRRKILSELLMTPCLKLSPPKSCTMFKPVPESSQLGKQGACKSTCSELGSSGIEKTDNLCSKYPELLGIQHAPITRKTDLESSPVWWFSPPKTCVLMEPVNEKKPIDETGGSFDVPNIIPEAKHTTEGSMSMVVESTPLFKEPESIMTRNRTKAGESTLKKELWTRFEEATIHDSRFNSMTTTTTVRGNNKKCFMEMLEEVSGNEEDHELSV", "length": 461, "header": "tr|Q9SU31-1|Q9SU31_ARATH Isoform 1 of Uncharacterized protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SU31-1" }, "locus": { "chromosome": "4", "start_pos": 7429876, "end_pos": 7432004, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT4G12540.1", "url": "https://www.ensemblgenomes.org/id/AT4G12540.1" }, { "database": "Ensembl Peptide", "id": "AT4G12540.1", "url": "https://www.ensemblgenomes.org/id/AT4G12540.1" } ] } } ], "glycosylation": [], "phosphorylation": [ { "start_pos": 338, "end_pos": 338, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SU31", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SU31" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ], "site_lbl": "Ser338" } ], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "1999", "authors": "Mayer K, Sch\u00fcller C, Wambutt R, Murphy G, Volckaert G, Pohl T, D\u00fcsterh\u00f6ft A, Stiekema W, Entian K D, Terryn N, Harris B, Ansorge W, Brandt P, Grivell L, Rieger M, Weichselgartner M, de Simone V, Obermaier B, Mache R, M\u00fcller M, Kreis M, Delseny M, Puigdomenech P, Watson M, Schmidtheini T, Reichert B, Portatelle D, Perez-Alonso M, Boutry M, Bancroft I, Vos P, Hoheisel J, Zimmermann W, Wedler H, Ridley P, Langham S A, McCullagh B, Bilham L, Robben J, Van der Schueren J, Grymonprez B, Chuang Y J, Vandenbussche F, Braeken M, Weltjens I, Voet M, Bastiaens I, Aert R, Defoor E, Weitzenegger T, Bothe G, Ramsperger U, Hilbert H, Braun M, Holzer E, Brandt A, Peters S, van Staveren M, Dirske W, Mooijman P, Klein Lankhorst R, Rose M, Hauf J, K\u00f6tter P, Berneiser S, Hempel S, Feldpausch M, Lamberth S, Van den Daele H, De Keyser A, Buysshaert C, Gielen J, Villarroel R, De Clercq R, Van Montagu M, Rogers J, Cronin A, Quail M, Bray-Allen S, Clark L, Doggett J, Hall S, Kay M, Lennard N, McLay K, Mayes R, Pettett A, Rajandream M A, Lyne M, Benes V, Rechmann S, Borkova D, Bl\u00f6cker H, Scharfe M, Grimm M, L\u00f6hnert T H, Dose S, de Haan M, Maarse A, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Fartmann B, Granderath K, Dauner D, Herzl A, Neumann S, Argiriou A, Vitale D, Liguori R, Piravandi E, Massenet O, Quigley F, Clabauld G, M\u00fcndlein A, Felber R, Schnabl S, Hiller R, Schmidt W, Lecharny A, Aubourg S, Chefdor F, Cooke R, Berger C, Montfort A, Casacuberta E, Gibbons T, Weber N, Vandenbol M, Bargues M, Terol J, Torres A, Perez-Perez A, Purnelle B, Bent E, Johnson S, Tacon D, Jesse T, Heijnen L, Schwarz S, Scholler P, Heber S, Francs P, Bielke C, Frishman D, Haase D, Lemcke K, Mewes H W, Stocker S, Zaccaria P, Bevan M, Wilson R K, de la Bastide M, Habermann K, Parnell L, Dedhia N, Gnoj L, Schutz K, Huang E, Spiegel L, Sehkon M, Murray J, Sheet P, Cordes M, Abu-Threideh J, Stoneking T, Kalicki J, Graves T, Harmon G, Edwards J, Latreille P, Courtney L, Cloud J, Abbott A, Scott K, Johnson D, Minx P, Bentley D, Fulton B, Miller N, Greco T, Kemp K, Kramer J, Fulton L, Mardis E, Dante M, Pepin K, Hillier L, Nelson J, Spieth J, Ryan E, Andrews S, Geisel C, Layman D, Du H, Ali J, Berghoff A, Jones K, Drone K, Cotton M, Joshu C, Antonoiu B, Zidanic M, Strong C, Sun H, Lamar B, Yordan C, Ma P, Zhong J, Preston R, Vil D, Shekher M, Matero A, Shah R, Swaby I K, O'Shaughnessy A, Rodriguez M, Hoffmann J, Till S, Granat S, Shohdy N, Hasegawa A, Hameed A, Lodhi M, Johnson A, Chen E, Marra M, Martienssen R, McCombie W R", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8B408", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B408" } ], "reference": [ { "type": "PubMed", "id": "10617198", "url": "https://glygen.org/publication/PubMed/10617198" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8B408", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B408" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] }, { "title": "Capturing the phosphorylation and protein interaction landscape of the plant TOR kinase.", "journal": "Nature plants", "date": "2019-03", "authors": "Van Leene Jelle, Han Chao, Gadeyne Astrid, Eeckhout Dominique, Matthijs Caroline, Cannoot Bernard, De Winne Nancy, Persiau Geert, Van De Slijke Eveline, Van de Cotte Brigitte, Stes Elisabeth, Van Bel Michiel, Storme Veronique, Impens Francis, Gevaert Kris, Vandepoele Klaas, De Smet Ive, De Jaeger Geert", "evidence": [ { "database": "iPTMnet", "id": "Q9SU31", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SU31" } ], "reference": [ { "type": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ], "pathway": [ { "id": "ath:AT4G12540", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT4G12540", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q9SU31", "url": "https://www.uniprot.org/uniprotkb/Q9SU31" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 185, "end_pos": 187, "annotation": "n_glycosylation_sequon" }, { "start_pos": 399, "end_pos": 401, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [ 338 ], "sequon_annotation_sites": [ { "start_pos": 185, "end_pos": 187 }, { "start_pos": 399, "end_pos": 401 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 } ], "sort_fields": [ "start_pos", "end_pos", "kinase_uniprot_canonical_ac", "kinase_gene_name", "residue", "comment", "site_lbl" ] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 3 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "Q9STM7-1", "uniprot_ac": "Q9STM7", "uniprot_id": "Q9STM7_ARATH", "mass": { "chemical_mass": 79135.0, "monoisotopic_mass": 79135.0 }, "refseq": { "ac": "NP_192581", "name": "Proline-rich extensin-like family protein", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_192581" }, "gene_names": [ { "name": "EXT8", "type": "recommended", "evidence": [ { "id": "Q9STM7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9STM7" } ] }, { "name": "T28D5.100", "type": "synonym", "evidence": [ { "id": "NP_192581", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_192581" }, { "id": "Q9STM7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9STM7" } ] }, { "name": "T28D5_100", "type": "synonym", "evidence": [ { "id": "NP_192581", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_192581" }, { "id": "Q9STM7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9STM7" } ] } ], "protein_names": [ { "name": "Proline-rich extensin-like family protein", "type": "synonym", "evidence": [ { "id": "NP_192581", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_192581" }, { "id": "Q9STM7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9STM7/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9STM7", "url": "https://www.uniprot.org/uniprotkb/Q9STM7" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "EXT8", "url": "https://www.uniprot.org/uniprotkb/Q9STM7", "locus": {} } ], "crossref": [ { "id": "AT4G08410", "url": "https://bar.utoronto.ca/thalemine/portal.do?externalids=AT4G08410", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "826400", "url": "https://www.ncbi.nlm.nih.gov/gene/826400", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR006706", "url": "https://www.ebi.ac.uk/interpro/entry/IPR006706", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT4G08410", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT4G08410", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "PIVDYKS", "url": "https://omabrowser.org/oma/group/PIVDYKS/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR36586", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR36586", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR36586:SF47", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR36586:SF47", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF04554", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF04554", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PR:Q9STM7", "url": "https://proconsortium.org/cgi-bin/entry_pro?id=PR:Q9STM7", "database": "PRO", "categories": [ "Protein" ] }, { "id": "NP_192581", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_192581", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT4G08410", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT4G08410", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "A0A1P8B4B8", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B4B8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A1P8B4B8-1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B4B8-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9STM7", "url": "https://www.uniprot.org/uniprotkb/Q9STM7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9STM7-1", "url": "https://www.uniprot.org/uniprotkb/Q9STM7-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MFMIKYNIKPKQRKKIVAMGVIRTSRTMGLGQCMVYVVVLSAIAATVTSYPYTSPQTPHYNSPSHEHKIPKYTPHPKPSIYSSSPPPSYYSPSPKVDYKSPPPSYVYSSPPPPYYSPSPKVDYKSLPPPYVYSSPPPPYYSPSPKVNYKSPPPPYVYSSPPPPYYSPSPKGDYKSPPPPYVYSSPPPPYYSPSPKVDYKSPPPPYVYSSPPPPYYSPTPKVDYKSPPPPYVYSSPPPPYYSPSPKVDYKSPPPPYVYSSPPPPYYSPSPKVNYKSPPPPYVYGSPPPPYYSPSPKVDYKSPPPPYVYSSPPPPYYSPSPKVNYKSPPPPYVYGSPPPPYYSPSPKVDYKSPPPPYVYSSPPPPYYSPSPKVDYKSPPPPYVYSSTPPPYYSPSPKVDYKSPPPPYVYSSPPPPYYSPSPKVDYKSPPPPYIYSSTPLPYYSPSPKVDYKSPPPPYVYSSPPPPYYSPSPKVDYKPPPPPYVYSSPPPPYYSPSPKVDYKSPPPPYVYSFPPPPYYSPSPKVDYKSPPPPYVYSSPPPPYYSPSPKVNYKSPPPPYVYSSPPPPYYSPSPKVEYKSPPPPYIYSSPPPPYYAPSPKVDYKSPPPPYVYSSPPPPYYSPSPKVDYKSPPPPYVYSSPPPPYYSPSPKVNYKSPPPPYVYSSPPPPYYSPSPKVDYKSSPPQYVYSSPPTPYYSPSPKVTYKSPPPPYVY", "length": 707, "header": "tr|Q9STM7-1|Q9STM7_ARATH Isoform 1 of Proline-rich extensin-like family protein OS=Arabidopsis thaliana OX=3702 GN=EXT8 PE=4 SV=1 CANONICAL=Q9STM7-1" }, "isoforms": [ { "isoform_ac": "A0A1P8B4B8-1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B4B8/entry", "sequence": { "sequence": "MFMIKYNIKPKQRKKIVAMGVIRTSRTMGLGQCMVYVVVLSAIAATVTSYPYTSPQTPHYNSPSHEHKIPKYTPHPKPSIYSSSPPPSYYSPSPKVNYKSPPPPYVYSSPPPPYYSPSPKVDYKSSPPQYVYSSPPTPYYSPSPKVTYKSPPPPYVY", "length": 157, "header": "tr|A0A1P8B4B8-1|Q9STM7_ARATH Computationally mapped isoform of Proline-rich extensin-like family protein OS=Arabidopsis thaliana OX=3702 GN=EXT8 PE=4 SV=1 CANONICAL=Q9STM7-1" }, "locus": { "chromosome": "4", "start_pos": 5338819, "end_pos": 5341209, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT4G08410.2", "url": "https://www.ensemblgenomes.org/id/AT4G08410.2" }, { "database": "Ensembl Peptide", "id": "AT4G08410.2", "url": "https://www.ensemblgenomes.org/id/AT4G08410.2" } ] } }, { "isoform_ac": "Q9STM7-1", "url": "https://www.uniprot.org/uniprotkb/Q9STM7/entry", "sequence": { "sequence": "MFMIKYNIKPKQRKKIVAMGVIRTSRTMGLGQCMVYVVVLSAIAATVTSYPYTSPQTPHYNSPSHEHKIPKYTPHPKPSIYSSSPPPSYYSPSPKVDYKSPPPSYVYSSPPPPYYSPSPKVDYKSLPPPYVYSSPPPPYYSPSPKVNYKSPPPPYVYSSPPPPYYSPSPKGDYKSPPPPYVYSSPPPPYYSPSPKVDYKSPPPPYVYSSPPPPYYSPTPKVDYKSPPPPYVYSSPPPPYYSPSPKVDYKSPPPPYVYSSPPPPYYSPSPKVNYKSPPPPYVYGSPPPPYYSPSPKVDYKSPPPPYVYSSPPPPYYSPSPKVNYKSPPPPYVYGSPPPPYYSPSPKVDYKSPPPPYVYSSPPPPYYSPSPKVDYKSPPPPYVYSSTPPPYYSPSPKVDYKSPPPPYVYSSPPPPYYSPSPKVDYKSPPPPYIYSSTPLPYYSPSPKVDYKSPPPPYVYSSPPPPYYSPSPKVDYKPPPPPYVYSSPPPPYYSPSPKVDYKSPPPPYVYSFPPPPYYSPSPKVDYKSPPPPYVYSSPPPPYYSPSPKVNYKSPPPPYVYSSPPPPYYSPSPKVEYKSPPPPYIYSSPPPPYYAPSPKVDYKSPPPPYVYSSPPPPYYSPSPKVDYKSPPPPYVYSSPPPPYYSPSPKVNYKSPPPPYVYSSPPPPYYSPSPKVDYKSSPPQYVYSSPPTPYYSPSPKVTYKSPPPPYVY", "length": 707, "header": "tr|Q9STM7-1|Q9STM7_ARATH Isoform 1 of Proline-rich extensin-like family protein OS=Arabidopsis thaliana OX=3702 GN=EXT8 PE=4 SV=1 CANONICAL=Q9STM7-1" }, "locus": { "chromosome": "4", "start_pos": 5338863, "end_pos": 5341209, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT4G08410.1", "url": "https://www.ensemblgenomes.org/id/AT4G08410.1" }, { "database": "Ensembl Peptide", "id": "AT4G08410.1", "url": "https://www.ensemblgenomes.org/id/AT4G08410.1" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "other", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 218, "start_aa": "Thr", "end_pos": 218, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr218", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ], "filter_code": "000000000000000010000.00000000001000.0.01000" } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "1999", "authors": "Mayer K, Sch\u00fcller C, Wambutt R, Murphy G, Volckaert G, Pohl T, D\u00fcsterh\u00f6ft A, Stiekema W, Entian K D, Terryn N, Harris B, Ansorge W, Brandt P, Grivell L, Rieger M, Weichselgartner M, de Simone V, Obermaier B, Mache R, M\u00fcller M, Kreis M, Delseny M, Puigdomenech P, Watson M, Schmidtheini T, Reichert B, Portatelle D, Perez-Alonso M, Boutry M, Bancroft I, Vos P, Hoheisel J, Zimmermann W, Wedler H, Ridley P, Langham S A, McCullagh B, Bilham L, Robben J, Van der Schueren J, Grymonprez B, Chuang Y J, Vandenbussche F, Braeken M, Weltjens I, Voet M, Bastiaens I, Aert R, Defoor E, Weitzenegger T, Bothe G, Ramsperger U, Hilbert H, Braun M, Holzer E, Brandt A, Peters S, van Staveren M, Dirske W, Mooijman P, Klein Lankhorst R, Rose M, Hauf J, K\u00f6tter P, Berneiser S, Hempel S, Feldpausch M, Lamberth S, Van den Daele H, De Keyser A, Buysshaert C, Gielen J, Villarroel R, De Clercq R, Van Montagu M, Rogers J, Cronin A, Quail M, Bray-Allen S, Clark L, Doggett J, Hall S, Kay M, Lennard N, McLay K, Mayes R, Pettett A, Rajandream M A, Lyne M, Benes V, Rechmann S, Borkova D, Bl\u00f6cker H, Scharfe M, Grimm M, L\u00f6hnert T H, Dose S, de Haan M, Maarse A, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Fartmann B, Granderath K, Dauner D, Herzl A, Neumann S, Argiriou A, Vitale D, Liguori R, Piravandi E, Massenet O, Quigley F, Clabauld G, M\u00fcndlein A, Felber R, Schnabl S, Hiller R, Schmidt W, Lecharny A, Aubourg S, Chefdor F, Cooke R, Berger C, Montfort A, Casacuberta E, Gibbons T, Weber N, Vandenbol M, Bargues M, Terol J, Torres A, Perez-Perez A, Purnelle B, Bent E, Johnson S, Tacon D, Jesse T, Heijnen L, Schwarz S, Scholler P, Heber S, Francs P, Bielke C, Frishman D, Haase D, Lemcke K, Mewes H W, Stocker S, Zaccaria P, Bevan M, Wilson R K, de la Bastide M, Habermann K, Parnell L, Dedhia N, Gnoj L, Schutz K, Huang E, Spiegel L, Sehkon M, Murray J, Sheet P, Cordes M, Abu-Threideh J, Stoneking T, Kalicki J, Graves T, Harmon G, Edwards J, Latreille P, Courtney L, Cloud J, Abbott A, Scott K, Johnson D, Minx P, Bentley D, Fulton B, Miller N, Greco T, Kemp K, Kramer J, Fulton L, Mardis E, Dante M, Pepin K, Hillier L, Nelson J, Spieth J, Ryan E, Andrews S, Geisel C, Layman D, Du H, Ali J, Berghoff A, Jones K, Drone K, Cotton M, Joshu C, Antonoiu B, Zidanic M, Strong C, Sun H, Lamar B, Yordan C, Ma P, Zhong J, Preston R, Vil D, Shekher M, Matero A, Shah R, Swaby I K, O'Shaughnessy A, Rodriguez M, Hoffmann J, Till S, Granat S, Shohdy N, Hasegawa A, Hameed A, Lodhi M, Johnson A, Chen E, Marra M, Martienssen R, McCombie W R", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8B4B8", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B4B8" } ], "reference": [ { "type": "PubMed", "id": "10617198", "url": "https://glygen.org/publication/PubMed/10617198" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8B4B8", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B4B8" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT4G08410", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT4G08410", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "structural constituent of cell wall", "id": "GO:0005199", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005199", "evidence": [ { "database": "UniProtKB", "id": "Q9STM7", "url": "https://www.uniprot.org/uniprotkb/Q9STM7" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "plant-type cell wall organization", "id": "GO:0009664", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009664", "evidence": [ { "database": "UniProtKB", "id": "Q9STM7", "url": "https://www.uniprot.org/uniprotkb/Q9STM7" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "Q9STM7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9STM7" }, { "id": "PF04554", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF04554" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Extensin", "eco_id": "ECO_0000259", "start_pos": 105, "end_pos": 154, "start_aa": "Tyr", "end_aa": "Pro", "glycosite_overlap": [] } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [ 218 ], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 1 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 1 }, { "field": "exact_o_linked_sites", "count": 1 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 1 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 1 }, { "field": "exact_o_linked_sites", "count": 1 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "Q9SUY0-1", "uniprot_ac": "Q9SUY0", "uniprot_id": "FB244_ARATH", "mass": { "chemical_mass": 46189.0, "monoisotopic_mass": 46189.0 }, "refseq": {}, "gene_names": [ { "name": "F7K2.3", "type": "synonym", "evidence": [ { "id": "Q9SUY0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SUY0" } ] }, { "name": "F7K2_3", "type": "synonym", "evidence": [ { "id": "Q9SUY0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SUY0" } ] } ], "protein_names": [ { "name": "F-box protein At4g22390", "type": "recommended", "evidence": [ { "id": "Q9SUY0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SUY0/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9SUY0", "url": "https://www.uniprot.org/uniprotkb/Q9SUY0" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9SUY0", "locus": {} } ], "crossref": [ { "id": "Q9SUY0", "url": "https://alphafold.ebi.ac.uk/entry/Q9SUY0", "database": "AlphaFoldDB", "categories": [] }, { "id": "AT4G22390", "url": "https://bar.utoronto.ca/thalemine/portal.do?externalids=AT4G22390", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "828334", "url": "https://www.ncbi.nlm.nih.gov/gene/828334", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR006527", "url": "https://www.ebi.ac.uk/interpro/entry/IPR006527", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR017451", "url": "https://www.ebi.ac.uk/interpro/entry/IPR017451", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR050796", "url": "https://www.ebi.ac.uk/interpro/entry/IPR050796", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT4G22390", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT4G22390", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "WILPRSE", "url": "https://omabrowser.org/oma/group/WILPRSE/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR31672", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31672", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR31672:SF13", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31672:SF13", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF07734", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF07734", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PR:Q9SUY0", "url": "https://proconsortium.org/cgi-bin/entry_pro?id=PR:Q9SUY0", "database": "PRO", "categories": [ "Protein" ] }, { "id": "AT4G22390", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT4G22390", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "A0A1P8B5B5", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B5B5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A1P8B5B5-1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B5B5-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9SUY0", "url": "https://www.uniprot.org/uniprotkb/Q9SUY0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9SUY0-1", "url": "https://www.uniprot.org/uniprotkb/Q9SUY0-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MAECPTDLINEMFLRLRATTLVKCRVLSKPCFSLIDSPEFVSSHLRRRLETGEHLMILLRGPRLLRTVELDSPENVSDIPHPLQAGGFTEVFGSFNGVIGLCNSPVDLAIFNPSTRKIHRLPIEPIDFPERDITREYVFYGLGYDSVGDDFKVVRIVQCKLKEGKKKFPCPVEVKVFSLKKNSWKRVCLMFEFQILWISYYYHLLPRRGYGVVVNNHLHWILPRRQGVIAFNAIIKYDLASDDIGVLSFPQELYIEDNMDIGVLDGCVCLMCYDEYSHVDVWVLKEYEDYKSWTKLYRVPKPESVESVEFIRPLICSKDRSKILLEINNAANLMWFDLESQSLTTAGIECDSSFTADILVSSLVLGCKGDPTQAQRSKDQKMMPKSTKRWDGFLSKGFKLKL", "length": 402, "header": "sp|Q9SUY0-1|FB244_ARATH Isoform 1 of F-box protein At4g22390 OS=Arabidopsis thaliana OX=3702 GN= PE=2 SV=3 CANONICAL=Q9SUY0-1" }, "isoforms": [ { "isoform_ac": "A0A1P8B5B5-1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B5B5/entry", "sequence": { "sequence": "MAECPTDLINEMFLRLRATTLVKCRVLSKPCFSLIDSPEFVSSHLRRRLETGEHLMILLRGPRLLRTVELDSPENVSDIPHPLQAGGFTEVFGSFNGVIGLCNSPVDLAIFNPSTRKIHRLPIEPIDFPERDITREYVFYGLGYDSVGDDFKVVRIVQCKLKEGKKKFPCPVEVKVFSLKKNSWKRVCLMFEFQILWISYYYHLLPRRGYGVVVNNHLHWILPRRQGVIAFNAIIKYDLASDDIGVLSFPQELYIEDNMDIGVLDGCVCLMCYDEYSHVDVWVLKEYEDYKSWTKLYRVPKPESVESVEFIRPLICSKDRSKILLEINNAANLMWFDLESQSLTTAGIECDSSFTADILVSSLVLGCKGDPTQAQRSKDQKMMPKSTKRDGFLSKGFKLKL", "length": 401, "header": "tr|A0A1P8B5B5-1|FB244_ARATH Computationally mapped isoform of F-box protein At4g22390 OS=Arabidopsis thaliana OX=3702 GN= PE=2 SV=1 CANONICAL=Q9SUY0-1" }, "locus": { "chromosome": "4", "start_pos": 11813313, "end_pos": 11815164, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT4G22390.2", "url": "https://www.ensemblgenomes.org/id/AT4G22390.2" }, { "database": "Ensembl Peptide", "id": "AT4G22390.2", "url": "https://www.ensemblgenomes.org/id/AT4G22390.2" } ] } }, { "isoform_ac": "Q9SUY0-1", "url": 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Hempel S, Feldpausch M, Lamberth S, Van den Daele H, De Keyser A, Buysshaert C, Gielen J, Villarroel R, De Clercq R, Van Montagu M, Rogers J, Cronin A, Quail M, Bray-Allen S, Clark L, Doggett J, Hall S, Kay M, Lennard N, McLay K, Mayes R, Pettett A, Rajandream M A, Lyne M, Benes V, Rechmann S, Borkova D, Bl\u00f6cker H, Scharfe M, Grimm M, L\u00f6hnert T H, Dose S, de Haan M, Maarse A, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Fartmann B, Granderath K, Dauner D, Herzl A, Neumann S, Argiriou A, Vitale D, Liguori R, Piravandi E, Massenet O, Quigley F, Clabauld G, M\u00fcndlein A, Felber R, Schnabl S, Hiller R, Schmidt W, Lecharny A, Aubourg S, Chefdor F, Cooke R, Berger C, Montfort A, Casacuberta E, Gibbons T, Weber N, Vandenbol M, Bargues M, Terol J, Torres A, Perez-Perez A, Purnelle B, Bent E, Johnson S, Tacon D, Jesse T, Heijnen L, Schwarz S, Scholler P, Heber S, Francs P, Bielke C, Frishman D, Haase D, Lemcke K, Mewes H W, Stocker S, Zaccaria P, Bevan M, Wilson R K, de la 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"https://glygen.org/publication/PubMed/10617198" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8B689", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B689" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT4G39600", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT4G39600", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q9SV98", "url": 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"database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT4G29950", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT4G29950", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "A0A1P8B6U2", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B6U2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A1P8B6U2-1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B6U2-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F4JPG6", "url": "https://www.uniprot.org/uniprotkb/F4JPG6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F4JPG6-1", "url": "https://www.uniprot.org/uniprotkb/F4JPG6-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9SZR5", "url": "https://www.uniprot.org/uniprotkb/Q9SZR5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9SZR5-1", "url": "https://www.uniprot.org/uniprotkb/Q9SZR5-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MVPSEIESLGDESDRRFANLRGLRWRVNLGVLPFQSSSIDDLRKATAESRRRYAALRRRLLIDPHLSKDVRNSPDLSIDNPLSQNPDSTWGRFFRNAELEKTLDQDLSRLYPEHWSYFQAPGCQGMLRRILLLWCLKHPEYGYRQGMHELLAPLLYVLHVDVDRLSEVRKSYEDHFIDRFDGLSFEERDITYNFEFKKFLEDFTDDEIGGIQGNSKKIKSLDELDPEIQSIVRLSDAYGAEGELGIVLSEKFMEHDAYCMFDALMNGVHGCVAMAGFFAYSPASGSHTGLPPVLEASTAFYHLLSFVDSSLHSHLVELGVEPQYFGLRWLRVLFGREFLLQDLLIVWDEIFSADNTTRTDADNNTNQSYKIFDSPRGALISGMAVSMILCLRSSLLATENAASCLQRLLNFPEKIDVRKIIEKAKSLQTLALDDDVRSSALSINDGFDQSISPAVPARTNSFPSGSTSPKSPLIITPQSYWEDQWRVLHKAAEEEKKSPSPIQKKKPWFRVKRLFRAESEPTHSAKSPNGKSEVKISSVARNLLEDFNRQLVSEPVEANPIDVVNNEDSSIRETEDINTDFETAAEESIVMEENSSDLFSDPNSPLRDSNYIENDSDSSNESNLFPDETVKDRETSVVDSPLSISSQPSMEFIVSLSKDQETSVVDSPLPVSSQPSIEFPVTQSNDEDNAADKSVANIKERSKVLPGKFQWFWKFGRNVTAEETRCNGVESSKSDLVCSSESHSLPQASSSGSKGDTDQNVMNTLKNLGNSMLEHIQVIESVFQQERGQVQAGLIENLSKNNLVEKGQVTAMTALKELRKISNLLLEM", "length": 828, "header": "tr|Q9SZR5-1|Q9SZR5_ARATH Isoform 1 of Ypt/Rab-GAP domain of gyp1p superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SZR5-1" }, "isoforms": [ { "isoform_ac": "A0A1P8B6U2-1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B6U2/entry", "sequence": { "sequence": "MLCCQSFLIWETLRDLSYLGLARDLIGSSNSINVLVLQCFCLCRYAALRRRLLIDPHLSKDVRNSPDLSIDNPLSQNPDSTWGRFFRNAELEKTLDQDLSRLYPEHWSYFQAPGCQGMLRRILLLWCLKHPEYGYRQGMHELLAPLLYVLHVDVDRLSEVRKSYEDHFIDRFDGLSFEERDITYNFEFKKFLEDFTDDEIGGIQGNSKKIKSLDELDPEIQSIVRLSDAYGAEGELGIVLSEKFMEHDAYCMFDALMNGVHGCVAMAGFFAYSPASGSHTGLPPVLEASTAFYHLLSFVDSSLHSHLVELGVEPQYFGLRWLRVLFGREFLLQDLLIVWDEIFSADNTTRTDADNNTNQSYKIFDSPRGALISGMAVSMILCLRSSLLATENAASCLQRLLNFPEKIDVRKIIEKAKSLQTLALDDDVRSSALSINDGFDQSISPAVPARTNSFPSGSTSPKSPLIITPQSYWEDQWRVLHKAAEEEKKSPSPIQKKKPWFRVKRLFRAESEPTHSAKSPNGKSEVKISSVARNLLEDFNRQLVSEPVEANPIDVVNNEDSSIRETEDINTDFETAAEESIVMEENSSDLFSDPNSPLRDSNYIENDSDSSNESNLFPDETVKDRETSVVDSPLSISSQPSMEFIVSLSKDQETSVVDSPLPVSSQPSIEFPVTQSNDEDNAADKSVANIKERSKVLPGKFQWFWKFGRNVTAEETRCNGVESSKSDLVCSSESHSLPQASSSGSKGDTDQNVMNTLKNLGNSMLEHIQVIESVFQQERGQVQAGLIENLSKNNLVEKGQVTAMTALKELRKISNLLLEM", "length": 820, "header": "tr|A0A1P8B6U2-1|Q9SZR5_ARATH Computationally mapped isoform of Ypt/Rab-GAP domain of gyp1p superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SZR5-1" }, "locus": { "chromosome": "4", "start_pos": 14657045, "end_pos": 14660370, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT4G29950.3", "url": "https://www.ensemblgenomes.org/id/AT4G29950.3" }, { "database": "Ensembl Peptide", "id": "AT4G29950.3", "url": "https://www.ensemblgenomes.org/id/AT4G29950.3" } ] } }, { "isoform_ac": "F4JPG6-1", "url": "https://www.uniprot.org/uniprotkb/F4JPG6/entry", "sequence": { "sequence": "MLRRILLLWCLKHPEYGYRQGMHELLAPLLYVLHVDVDRLSEVRKSYEDHFIDRFDGLSFEERDITYNFEFKKFLEDFTDDEIGGIQGNSKKIKSLDELDPEIQSIVRLSDAYGAEGELGIVLSEKFMEHDAYCMFDALMNGVHGCVAMAGFFAYSPASGSHTGLPPVLEASTAFYHLLSFVDSSLHSHLVELGVEPQYFGLRWLRVLFGREFLLQDLLIVWDEIFSADNTTRTDADNNTNQSYKIFDSPRGALISGMAVSMILCLRSSLLATENAASCLQRLLNFPEKIDVRKIIEKAKSLQTLALDDDVRSSALSINDGFDQSISPAVPARTNSFPSGSTSPKSPLIITPQSYWEDQWRVLHKAAEEEKKSPSPIQKKKPWFRVKRLFRAESEPTHSAKSPNGKSEVKISSVARNLLEDFNRQLVSEPVEANPIDVVNNEDSSIRETEDINTDFETAAEESIVMEENSSDLFSDPNSPLRDSNYIENDSDSSNESNLFPDETVKDRETSVVDSPLSISSQPSMEFIVSLSKDQETSVVDSPLPVSSQPSIEFPVTQSNDEDNAADKSVANIKERSKVLPGKFQWFWKFGRNVTAEETRCNGVESSKSDLVCSSESHSLPQASSSGSKGDTDQNVMNTLKNLGNSMLEHIQVIESVFQQERGQVQAGLIENLSKNNLVEKGQVTAMTALKELRKISNLLLEM", "length": 703, "header": "tr|F4JPG6-1|F4JPG6_ARATH Computationally mapped isoform of Ypt/Rab-GAP domain of gyp1p superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SZR5-1" }, "locus": { "chromosome": "4", "start_pos": 14657048, "end_pos": 14660573, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT4G29950.2", "url": "https://www.ensemblgenomes.org/id/AT4G29950.2" }, { "database": "Ensembl Peptide", "id": "AT4G29950.2", "url": "https://www.ensemblgenomes.org/id/AT4G29950.2" } ] } }, { "isoform_ac": "Q9SZR5-1", "url": "https://www.uniprot.org/uniprotkb/Q9SZR5/entry", "sequence": { "sequence": "MVPSEIESLGDESDRRFANLRGLRWRVNLGVLPFQSSSIDDLRKATAESRRRYAALRRRLLIDPHLSKDVRNSPDLSIDNPLSQNPDSTWGRFFRNAELEKTLDQDLSRLYPEHWSYFQAPGCQGMLRRILLLWCLKHPEYGYRQGMHELLAPLLYVLHVDVDRLSEVRKSYEDHFIDRFDGLSFEERDITYNFEFKKFLEDFTDDEIGGIQGNSKKIKSLDELDPEIQSIVRLSDAYGAEGELGIVLSEKFMEHDAYCMFDALMNGVHGCVAMAGFFAYSPASGSHTGLPPVLEASTAFYHLLSFVDSSLHSHLVELGVEPQYFGLRWLRVLFGREFLLQDLLIVWDEIFSADNTTRTDADNNTNQSYKIFDSPRGALISGMAVSMILCLRSSLLATENAASCLQRLLNFPEKIDVRKIIEKAKSLQTLALDDDVRSSALSINDGFDQSISPAVPARTNSFPSGSTSPKSPLIITPQSYWEDQWRVLHKAAEEEKKSPSPIQKKKPWFRVKRLFRAESEPTHSAKSPNGKSEVKISSVARNLLEDFNRQLVSEPVEANPIDVVNNEDSSIRETEDINTDFETAAEESIVMEENSSDLFSDPNSPLRDSNYIENDSDSSNESNLFPDETVKDRETSVVDSPLSISSQPSMEFIVSLSKDQETSVVDSPLPVSSQPSIEFPVTQSNDEDNAADKSVANIKERSKVLPGKFQWFWKFGRNVTAEETRCNGVESSKSDLVCSSESHSLPQASSSGSKGDTDQNVMNTLKNLGNSMLEHIQVIESVFQQERGQVQAGLIENLSKNNLVEKGQVTAMTALKELRKISNLLLEM", "length": 828, "header": "tr|Q9SZR5-1|Q9SZR5_ARATH Isoform 1 of Ypt/Rab-GAP domain of gyp1p superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SZR5-1" }, "locus": { "chromosome": "4", "start_pos": 14656954, "end_pos": 14660573, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT4G29950.1", "url": "https://www.ensemblgenomes.org/id/AT4G29950.1" }, { "database": "Ensembl Peptide", "id": "AT4G29950.1", "url": "https://www.ensemblgenomes.org/id/AT4G29950.1" } ] } } ], "glycosylation": [], "phosphorylation": [ { "start_pos": 461, "end_pos": 461, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SZR5", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SZR5" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ], "site_lbl": "Ser461" }, { "start_pos": 464, "end_pos": 464, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SZR5", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SZR5" }, { "database": "PubMed", "id": "23328941", "url": "https://glygen.org/publication/PubMed/23328941" } ], "site_lbl": "Ser464" }, { "start_pos": 466, "end_pos": 466, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SZR5", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SZR5" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "29654922", "url": "https://glygen.org/publication/PubMed/29654922" } ], "site_lbl": "Ser466" }, { "start_pos": 471, "end_pos": 471, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SZR5", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SZR5" }, { "database": "PubMed", "id": "29654922", "url": "https://glygen.org/publication/PubMed/29654922" } ], "site_lbl": "Ser471" }, { "start_pos": 500, "end_pos": 500, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SZR5", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SZR5" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ], "site_lbl": "Ser500" }, { "start_pos": 527, "end_pos": 527, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SZR5", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SZR5" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ], "site_lbl": "Ser527" }, { "start_pos": 537, "end_pos": 537, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SZR5", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SZR5" }, { "database": "PubMed", "id": "29654922", "url": "https://glygen.org/publication/PubMed/29654922" } ], "site_lbl": "Ser537" } ], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "1999", "authors": "Mayer K, Sch\u00fcller C, Wambutt R, Murphy G, Volckaert G, Pohl T, D\u00fcsterh\u00f6ft A, Stiekema W, Entian K D, Terryn N, Harris B, Ansorge W, Brandt P, Grivell L, Rieger M, Weichselgartner M, de Simone V, Obermaier B, Mache R, M\u00fcller M, Kreis M, Delseny M, Puigdomenech P, Watson M, Schmidtheini T, Reichert B, Portatelle D, Perez-Alonso M, Boutry M, Bancroft I, Vos P, Hoheisel J, Zimmermann W, Wedler H, Ridley P, Langham S A, McCullagh B, Bilham L, Robben J, Van der Schueren J, Grymonprez B, Chuang Y J, Vandenbussche F, Braeken M, Weltjens I, Voet M, Bastiaens I, Aert R, Defoor E, Weitzenegger T, Bothe G, Ramsperger U, Hilbert H, Braun M, Holzer E, Brandt A, Peters S, van Staveren M, Dirske W, Mooijman P, Klein Lankhorst R, Rose M, Hauf J, K\u00f6tter P, Berneiser S, Hempel S, Feldpausch M, Lamberth S, Van den Daele H, De Keyser A, Buysshaert C, Gielen J, Villarroel R, De Clercq R, Van Montagu M, Rogers J, Cronin A, Quail M, Bray-Allen S, Clark L, Doggett J, Hall S, Kay M, Lennard N, McLay K, Mayes R, Pettett A, Rajandream M A, Lyne M, Benes V, Rechmann S, Borkova D, Bl\u00f6cker H, Scharfe M, Grimm M, L\u00f6hnert T H, Dose S, de Haan M, Maarse A, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Fartmann B, Granderath K, Dauner D, Herzl A, Neumann S, Argiriou A, Vitale D, Liguori R, Piravandi E, Massenet O, Quigley F, Clabauld G, M\u00fcndlein A, Felber R, Schnabl S, Hiller R, Schmidt W, Lecharny A, Aubourg S, Chefdor F, Cooke R, Berger C, Montfort A, Casacuberta E, Gibbons T, Weber N, Vandenbol M, Bargues M, Terol J, Torres A, Perez-Perez A, Purnelle B, Bent E, Johnson S, Tacon D, Jesse T, Heijnen L, Schwarz S, Scholler P, Heber S, Francs P, Bielke C, Frishman D, Haase D, Lemcke K, Mewes H W, Stocker S, Zaccaria P, Bevan M, Wilson R K, de la Bastide M, Habermann K, Parnell L, Dedhia N, Gnoj L, Schutz K, Huang E, Spiegel L, Sehkon M, Murray J, Sheet P, Cordes M, Abu-Threideh J, Stoneking T, Kalicki J, Graves T, Harmon G, Edwards J, Latreille P, Courtney L, Cloud J, Abbott A, Scott K, Johnson D, Minx P, Bentley D, Fulton B, Miller N, Greco T, Kemp K, Kramer J, Fulton L, Mardis E, Dante M, Pepin K, Hillier L, Nelson J, Spieth J, Ryan E, Andrews S, Geisel C, Layman D, Du H, Ali J, Berghoff A, Jones K, Drone K, Cotton M, Joshu C, Antonoiu B, Zidanic M, Strong C, Sun H, Lamar B, Yordan C, Ma P, Zhong J, Preston R, Vil D, Shekher M, Matero A, Shah R, Swaby I K, O'Shaughnessy A, Rodriguez M, Hoffmann J, Till S, Granat S, Shohdy N, Hasegawa A, Hameed A, Lodhi M, Johnson A, Chen E, Marra M, Martienssen R, McCombie W R", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8B6U2", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B6U2" } ], "reference": [ { "type": "PubMed", "id": "10617198", "url": "https://glygen.org/publication/PubMed/10617198" } ] }, { "title": "Quantitative phosphoproteomics after auxin-stimulated lateral root induction identifies an SNX1 protein phosphorylation site required for growth.", "journal": "Molecular & cellular proteomics : MCP", "date": "2013-05", "authors": "Zhang Hongtao, Zhou Houjiang, Berke Lidija, Heck Albert J R, Mohammed Shabaz, Scheres Ben, Menke Frank L H", "evidence": [ { "database": "iPTMnet", "id": "Q9SZR5", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SZR5" } ], "reference": [ { "type": "PubMed", "id": "23328941", "url": "https://glygen.org/publication/PubMed/23328941" } ] }, { "title": "Quantitative phosphoproteomics of the ataxia telangiectasia-mutated (ATM) and ataxia telangiectasia-mutated and rad3-related (ATR) dependent DNA damage response in Arabidopsis thaliana.", "journal": "Molecular & cellular proteomics : MCP", "date": "2015-03", "authors": "Roitinger Elisabeth, Hofer Manuel, K\u00f6cher Thomas, Pichler Peter, Novatchkova Maria, Yang Jianhua, Schl\u00f6gelhofer Peter, Mechtler Karl", "evidence": [ { "database": "iPTMnet", "id": "Q9SZR5", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SZR5" } ], "reference": [ { "type": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8B6U2", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B6U2" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] }, { "title": "Comparative qualitative phosphoproteomics analysis identifies shared phosphorylation motifs and associated biological processes in evolutionary divergent plants.", "journal": "Journal of proteomics", "date": "2018-06-15", "authors": "Al-Momani Shireen, Qi Da, Ren Zhe, Jones Andrew R", "evidence": [ { "database": "iPTMnet", "id": "Q9SZR5", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SZR5" } ], "reference": [ { "type": "PubMed", "id": "29654922", "url": "https://glygen.org/publication/PubMed/29654922" } ] } ], "pathway": [ { "id": "ath:AT4G29950", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT4G29950", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "GTPase activator activity", "id": "GO:0005096", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005096", "evidence": [ { "database": "UniProtKB", "id": "Q9SZR5", "url": "https://www.uniprot.org/uniprotkb/Q9SZR5" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 5, "go_terms": [ { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "Q9SZR5", "url": "https://www.uniprot.org/uniprotkb/Q9SZR5" } ], "pmid": "" }, { "name": "Golgi apparatus", "id": "GO:0005794", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005794", "evidence": [ { "database": "UniProtKB", "id": "Q9SZR5", "url": "https://www.uniprot.org/uniprotkb/Q9SZR5" } ], "pmid": "" }, { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "Q9SZR5", "url": "https://www.uniprot.org/uniprotkb/Q9SZR5" } ], "pmid": "" }, { "name": "endosome membrane", "id": "GO:0010008", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010008", "evidence": [ { "database": "UniProtKB", "id": "Q9SZR5", "url": 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"https://www.ebi.ac.uk/interpro/entry/IPR050796", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT4G33160", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT4G33160", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "PTHR31672", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31672", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR31672:SF7", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31672:SF7", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00646", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00646", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF03478", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF03478", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PR:Q9SMZ3", "url": "https://proconsortium.org/cgi-bin/entry_pro?id=PR:Q9SMZ3", "database": "PRO", "categories": [ "Protein" ] }, { "id": "NP_001320121", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001320121", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT4G33160", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT4G33160", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "A0A1P8B768", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B768", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A1P8B768-1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B768-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9SMZ3", "url": "https://www.uniprot.org/uniprotkb/Q9SMZ3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9SMZ3-1", "url": "https://www.uniprot.org/uniprotkb/Q9SMZ3-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MPSSATSTYLLSLKQVSLTASSPLLLQLKDRFFHQPKLLNMGFSTGKRKSRDEEEDRVSFFASEFPMDDLNDDVLERVLSWLPTSCFFRMSSVCKRWKSSQTSKSFKLACSQIPTRDPWFFMIDNDSNSSSFVFDSTENSWKNLNRRDFLHHHRQDFIPVASSGGLLCYRCSISGDFLLRNPLTGSSRDIPSQDNNNNKPLQAVAMTTTTVTPSSYTLVTISGEIPNLSFKIYESNADSWSKDQELESVKNNDSSLHDDYDTDSGTVYFLSKQGNVVVASNNLQRSPSKQYSSVITVTDEAEIVYFLSSYGTIVACDLTKRCFTELPKLLPPFLEYSIDLVECEGTMYVILLSEFFESASLRIWRLDNNREWVQVGMLPPALSHELYGKKGDINCVGGAGNKILVCFNASPPEVYCRYFVYDLVAEEWNELPKCFKDGEAVDFVSALSFQPRIEATV", "length": 457, "header": "sp|Q9SMZ3-1|FBX13_ARATH Isoform 1 of F-box only protein 13 OS=Arabidopsis thaliana OX=3702 GN=FBX13 PE=2 SV=2 CANONICAL=Q9SMZ3-1" }, "isoforms": [ { "isoform_ac": "A0A1P8B768-1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B768/entry", "sequence": { "sequence": "MFTGYSFGFGDSSEEEVAQHTIFPFLLVSLSPQEYLLCRGLSTLFDRGAQEASLLSLSLSSMPSSATSTYLLSLKQVSLTASSPLLLQLKDRFFHQPKLLNMGFSTGKRKSRDEEEDRVSFFASEFPMDDLNDDVLERVLSWLPTSCFFRMSSVCKRWKSSQTSKSFKLACSQIPTRDPWFFMIDNDSNSSSFVFDSTENSWKNLNRRDFLHHHRQDFIPVASSGGLLCYRCSISGDFLLRNPLTGSSRDIPSQDNNNNKPLQAVAMTTTTVTPSSYTLVTISGEIPNLSFKIYESNADSWSKDQELESVKNNDSSLHDDYDTDSGTVYFLSKQGNVVVASNNLQRSPSKQYSSVITVTDEAEIVYFLSSYGTIVACDLTKRCFTELPKLLPPFLEYSIDLVECEGTMYVILLSEFFESASLRIWRLDNNREWVQVGMLPPALSHELYGKKGDINCVGGAGNKILVCFNASPPEVYCRYFVYDLVAEEWNELPKCFKDGEAVDFVSALSFQPRIEATV", "length": 518, "header": "tr|A0A1P8B768-1|FBX13_ARATH Computationally mapped isoform of F-box only protein 13 OS=Arabidopsis thaliana OX=3702 GN=FBX13 PE=2 SV=1 CANONICAL=Q9SMZ3-1" }, "locus": { "chromosome": "4", "start_pos": 15993957, "end_pos": 15995655, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT4G33160.2", "url": "https://www.ensemblgenomes.org/id/AT4G33160.2" }, { "database": "Ensembl Peptide", "id": "AT4G33160.2", "url": "https://www.ensemblgenomes.org/id/AT4G33160.2" } ] } }, { "isoform_ac": "Q9SMZ3-1", "url": "https://www.uniprot.org/uniprotkb/Q9SMZ3/entry#Q9SMZ3-1", "sequence": { "sequence": "MPSSATSTYLLSLKQVSLTASSPLLLQLKDRFFHQPKLLNMGFSTGKRKSRDEEEDRVSFFASEFPMDDLNDDVLERVLSWLPTSCFFRMSSVCKRWKSSQTSKSFKLACSQIPTRDPWFFMIDNDSNSSSFVFDSTENSWKNLNRRDFLHHHRQDFIPVASSGGLLCYRCSISGDFLLRNPLTGSSRDIPSQDNNNNKPLQAVAMTTTTVTPSSYTLVTISGEIPNLSFKIYESNADSWSKDQELESVKNNDSSLHDDYDTDSGTVYFLSKQGNVVVASNNLQRSPSKQYSSVITVTDEAEIVYFLSSYGTIVACDLTKRCFTELPKLLPPFLEYSIDLVECEGTMYVILLSEFFESASLRIWRLDNNREWVQVGMLPPALSHELYGKKGDINCVGGAGNKILVCFNASPPEVYCRYFVYDLVAEEWNELPKCFKDGEAVDFVSALSFQPRIEATV", "length": 457, "header": "sp|Q9SMZ3-1|FBX13_ARATH Isoform 1 of F-box only protein 13 OS=Arabidopsis thaliana OX=3702 GN=FBX13 PE=2 SV=2 CANONICAL=Q9SMZ3-1" }, "locus": { "chromosome": "4", "start_pos": 15994019, "end_pos": 15995685, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT4G33160.1", "url": "https://www.ensemblgenomes.org/id/AT4G33160.1" }, { "database": "Ensembl Peptide", "id": "AT4G33160.1", "url": "https://www.ensemblgenomes.org/id/AT4G33160.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "1999", "authors": "Mayer K, Sch\u00fcller C, Wambutt R, Murphy G, Volckaert G, Pohl T, D\u00fcsterh\u00f6ft A, Stiekema W, Entian K D, Terryn N, Harris B, Ansorge W, Brandt P, Grivell L, Rieger M, Weichselgartner M, de Simone V, Obermaier B, Mache R, M\u00fcller M, Kreis M, Delseny M, Puigdomenech P, Watson M, Schmidtheini T, Reichert B, Portatelle D, Perez-Alonso M, Boutry M, Bancroft I, Vos P, Hoheisel J, Zimmermann W, Wedler H, Ridley P, Langham S A, McCullagh B, Bilham L, Robben J, Van der Schueren J, Grymonprez B, Chuang Y J, Vandenbussche F, Braeken M, Weltjens I, Voet M, Bastiaens I, Aert R, Defoor E, Weitzenegger T, Bothe G, Ramsperger U, Hilbert H, Braun M, Holzer E, Brandt A, Peters S, van Staveren M, Dirske W, Mooijman P, Klein Lankhorst R, Rose M, Hauf J, K\u00f6tter P, Berneiser S, Hempel S, Feldpausch M, Lamberth S, Van den Daele H, De Keyser A, Buysshaert C, Gielen J, Villarroel R, De Clercq R, Van Montagu M, Rogers J, Cronin A, Quail M, Bray-Allen S, Clark L, Doggett J, Hall S, Kay M, Lennard N, McLay K, Mayes R, Pettett A, Rajandream M A, Lyne M, Benes V, Rechmann S, Borkova D, Bl\u00f6cker H, Scharfe M, Grimm M, L\u00f6hnert T H, Dose S, de Haan M, Maarse A, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Fartmann B, Granderath K, Dauner D, Herzl A, Neumann S, Argiriou A, Vitale D, Liguori R, Piravandi E, Massenet O, Quigley F, Clabauld G, M\u00fcndlein A, Felber R, Schnabl S, Hiller R, Schmidt W, Lecharny A, Aubourg S, Chefdor F, Cooke R, Berger C, Montfort A, Casacuberta E, Gibbons T, Weber N, Vandenbol M, Bargues M, Terol J, Torres A, Perez-Perez A, Purnelle B, Bent E, Johnson S, Tacon D, Jesse T, Heijnen L, Schwarz S, Scholler P, Heber S, Francs P, Bielke C, Frishman D, Haase D, Lemcke K, Mewes H W, Stocker S, Zaccaria P, Bevan M, Wilson R K, de la Bastide M, Habermann K, Parnell L, Dedhia N, Gnoj L, Schutz K, Huang E, Spiegel L, Sehkon M, Murray J, Sheet P, Cordes M, Abu-Threideh J, Stoneking T, Kalicki J, Graves T, Harmon G, Edwards J, Latreille P, Courtney L, Cloud J, Abbott A, Scott K, Johnson D, Minx P, Bentley D, Fulton B, Miller N, Greco T, Kemp K, Kramer J, Fulton L, Mardis E, Dante M, Pepin K, Hillier L, Nelson J, Spieth J, Ryan E, Andrews S, Geisel C, Layman D, Du H, Ali J, Berghoff A, Jones K, Drone K, Cotton M, Joshu C, Antonoiu B, Zidanic M, Strong C, Sun H, Lamar B, Yordan C, Ma P, Zhong J, Preston R, Vil D, Shekher M, Matero A, Shah R, Swaby I K, O'Shaughnessy A, Rodriguez M, Hoffmann J, Till S, Granat S, Shohdy N, Hasegawa A, Hameed A, Lodhi M, Johnson A, Chen E, Marra M, Martienssen R, McCombie W R", "evidence": [ { 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"header": "tr|Q9SZW6-1|Q9SZW6_ARATH Isoform 1 of DUF630 family protein (DUF630 and DUF632) OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SZW6-1" }, "isoforms": [ { "isoform_ac": "A0A1P8B7X7-1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B7X7/entry", "sequence": { "sequence": "MGCSHSKFDDDEAVQICKDRKRFIKQAVEHRTGFASGHIAYIQSLRKVSDALREYIEGDEPHEFMLDTCVTPVKRMSSSGGFIEISPPSKMVQSEAESKLNVNSYLMASGSRPVRVEEKPPRSPETFQVETYGADSFFGMNMNMNSPGLGSHNIPPPSPQNSQWDFFWNPFSALDQYGYSYDNQNGMDDDMRRLRRVREEEGIPDLEEDEYVKFEDHHNMKATEDFNGGKMYQEDKVEHVNEEFTDSGCKIENESDKNCNGTQERRSLEVSRGGTTGHVVGVTSDDGKGETPGFTVYLNRRPTSMAEVIKDLEDQFAIICTAGKEVSGLLEASRVQYTSSNELSAMTMLNPVALFRSGGSSRSSSSSRFLISSSGGSRASEFESSSEFSEESCMLSGSHQSTLDRLYAWEKKLYDEVKSGDRIRIAYEKKCLVLRNQDVKGADSSAVDKTRATIRDLHTQIKVSIHSIESISERIETLRDQELLPQLLELVQGYAKTSFLFPENICFSLTDNGILQISSDVESDGRVSPDTEANIGRSQTITCNHTF", "length": 547, "header": "tr|A0A1P8B7X7-1|Q9SZW6_ARATH Computationally mapped isoform of DUF630 family protein (DUF630 and DUF632) OS=Arabidopsis thaliana 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Weber N, Vandenbol M, Bargues M, Terol J, Torres A, Perez-Perez A, Purnelle B, Bent E, Johnson S, Tacon D, Jesse T, Heijnen L, Schwarz S, Scholler P, Heber S, Francs P, Bielke C, Frishman D, Haase D, Lemcke K, Mewes H W, Stocker S, Zaccaria P, Bevan M, Wilson R K, de la Bastide M, Habermann K, Parnell L, Dedhia N, Gnoj L, Schutz K, Huang E, Spiegel L, Sehkon M, Murray J, Sheet P, Cordes M, Abu-Threideh J, Stoneking T, Kalicki J, Graves T, Harmon G, Edwards J, Latreille P, Courtney L, Cloud J, Abbott A, Scott K, Johnson D, Minx P, Bentley D, Fulton B, Miller N, Greco T, Kemp K, Kramer J, Fulton L, Mardis E, Dante M, Pepin K, Hillier L, Nelson J, Spieth J, Ryan E, Andrews S, Geisel C, Layman D, Du H, Ali J, Berghoff A, Jones K, Drone K, Cotton M, Joshu C, Antonoiu B, Zidanic M, Strong C, Sun H, Lamar B, Yordan C, Ma P, Zhong J, Preston R, Vil D, Shekher M, Matero A, Shah R, Swaby I K, O'Shaughnessy A, Rodriguez M, Hoffmann J, Till S, Granat S, Shohdy N, Hasegawa A, Hameed A, Lodhi M, Johnson A, Chen E, Marra M, Martienssen R, McCombie W R", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8B7X7", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B7X7" } ], "reference": [ { "type": "PubMed", "id": "10617198", "url": "https://glygen.org/publication/PubMed/10617198" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8B7X7", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B7X7" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT4G30130", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT4G30130", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { 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"tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "Q9STP7-1", "uniprot_ac": "Q9STP7", "uniprot_id": "Q9STP7_ARATH", "mass": { "chemical_mass": 40913.0, "monoisotopic_mass": 40913.0 }, "refseq": {}, "gene_names": [ { "name": "T27E11.30", "type": "synonym", "evidence": [ { "id": "Q9STP7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9STP7" } ] }, { "name": "T27E11_30", "type": "synonym", "evidence": [ { "id": "Q9STP7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9STP7" } ] } ], "protein_names": [ { "name": "Calcium-binding EF hand family protein", "type": "synonym", "evidence": [ { "id": "Q9STP7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9STP7/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9STP7", "url": "https://www.uniprot.org/uniprotkb/Q9STP7" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9STP7", "locus": {} } ], "crossref": [ { "id": "AT4G27790", "url": "https://bar.utoronto.ca/thalemine/portal.do?externalids=AT4G27790", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "828892", "url": "https://www.ncbi.nlm.nih.gov/gene/828892", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR002048", "url": "https://www.ebi.ac.uk/interpro/entry/IPR002048", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR011992", "url": "https://www.ebi.ac.uk/interpro/entry/IPR011992", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR018247", "url": "https://www.ebi.ac.uk/interpro/entry/IPR018247", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT4G27790", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT4G27790", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "FEADVDH", "url": "https://omabrowser.org/oma/group/FEADVDH/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A1P8B806", "url": "https://www.orthodb.org/?gene=A0A1P8B806", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "Q9STP7", "url": "https://www.orthodb.org/?gene=Q9STP7", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR10827", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR10827", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR10827:SF98", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR10827:SF98", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF13202", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF13202", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF13499", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF13499", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "AT4G27790", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT4G27790", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "A0A1P8B806", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B806", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A1P8B806-1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B806-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9STP7", "url": "https://www.uniprot.org/uniprotkb/Q9STP7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9STP7-1", "url": "https://www.uniprot.org/uniprotkb/Q9STP7-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MAKVVVYTILTATIIFLILLAHKKQNQTQSIEGLITRRIGRRLEMPVFDPLVTRIERLSHEKEAGTKTVEAAKEEKDDMFEEYFAQERRLNTTMRIKFLFPLLDASPRDGFVSLKELQTWMMQQTEDNMVYRTAKELELQDKDKDGVITFEEYLPQFSKQDIEKNEKGHGEAGWWMEQFKNSDFDHNGSLDIEEFNNFLHPEDSRNGDTQRWVLKERMTGMDTNGDGKLEYKEFVKNAYEMYKEFAKFEKEEDENVPTPQLLFAEMDRDKDRFLVADELRPILQYLQPGEMSYAKFYSTFLCHEADEDKDGKLSLEEMLHHEDVFYKAVHHEDLDDEDYFDHDEL", "length": 345, "header": "tr|Q9STP7-1|Q9STP7_ARATH Isoform 1 of Calcium-binding EF hand family protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9STP7-1" }, "isoforms": [ { "isoform_ac": "A0A1P8B806-1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B806/entry", "sequence": { "sequence": "MAKVVVYTILTATIIFLILLAHKKQNQTQSIEGLITRRIGRRLEMPVFDPLVTRIERLSHEKEAGTKTVEAAKEEKDDMFEEYFAQERRLNTTMRIKFLFPLLDASPRDGFVSLKELQTWMMQQTEDNMVYRTAKELELQDKDKDGVITFEEYLPQFSKQDIEKNEKGHGEAGWWMEQFKNSDFDHNGSLDIEEFNNFLHPEDSRNGDTQRWVLKERMTGMDTNGDGKLEYKEFVKNAYEMYKEFAKFEKEEDENVPTPQLLFAEMDRDKDRFLVADELRPILQYLQPGEMSYAKFYSTFLCHEVSLSQPKS", "length": 312, "header": "tr|A0A1P8B806-1|Q9STP7_ARATH Computationally mapped isoform of Calcium-binding EF hand family protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9STP7-1" }, "locus": { "chromosome": "4", "start_pos": 13850011, "end_pos": 13851272, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT4G27790.2", "url": "https://www.ensemblgenomes.org/id/AT4G27790.2" }, { "database": "Ensembl Peptide", "id": "AT4G27790.2", "url": "https://www.ensemblgenomes.org/id/AT4G27790.2" } ] } }, { "isoform_ac": "Q9STP7-1", "url": "https://www.uniprot.org/uniprotkb/Q9STP7/entry", "sequence": { "sequence": "MAKVVVYTILTATIIFLILLAHKKQNQTQSIEGLITRRIGRRLEMPVFDPLVTRIERLSHEKEAGTKTVEAAKEEKDDMFEEYFAQERRLNTTMRIKFLFPLLDASPRDGFVSLKELQTWMMQQTEDNMVYRTAKELELQDKDKDGVITFEEYLPQFSKQDIEKNEKGHGEAGWWMEQFKNSDFDHNGSLDIEEFNNFLHPEDSRNGDTQRWVLKERMTGMDTNGDGKLEYKEFVKNAYEMYKEFAKFEKEEDENVPTPQLLFAEMDRDKDRFLVADELRPILQYLQPGEMSYAKFYSTFLCHEADEDKDGKLSLEEMLHHEDVFYKAVHHEDLDDEDYFDHDEL", "length": 345, "header": "tr|Q9STP7-1|Q9STP7_ARATH Isoform 1 of Calcium-binding EF hand family protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9STP7-1" }, "locus": { "chromosome": "4", "start_pos": 13849949, "end_pos": 13851973, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT4G27790.1", "url": "https://www.ensemblgenomes.org/id/AT4G27790.1" }, { "database": "Ensembl Peptide", "id": "AT4G27790.1", "url": "https://www.ensemblgenomes.org/id/AT4G27790.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "1999", "authors": "Mayer K, Sch\u00fcller C, Wambutt R, Murphy G, Volckaert G, Pohl T, D\u00fcsterh\u00f6ft A, Stiekema W, Entian K D, Terryn N, Harris B, Ansorge W, Brandt P, Grivell L, Rieger M, Weichselgartner M, de Simone V, Obermaier B, Mache R, M\u00fcller M, Kreis M, Delseny M, Puigdomenech P, Watson M, Schmidtheini T, Reichert B, Portatelle D, Perez-Alonso M, Boutry M, Bancroft I, Vos P, Hoheisel J, Zimmermann W, Wedler H, Ridley P, Langham S A, McCullagh B, Bilham L, Robben J, Van der Schueren J, Grymonprez B, Chuang Y J, Vandenbussche F, Braeken M, Weltjens I, Voet M, Bastiaens I, Aert R, Defoor E, Weitzenegger T, Bothe G, Ramsperger U, Hilbert H, Braun M, Holzer E, Brandt A, Peters S, van Staveren M, Dirske W, Mooijman P, Klein Lankhorst R, Rose M, Hauf J, K\u00f6tter P, Berneiser S, Hempel S, Feldpausch M, Lamberth S, Van den Daele H, De Keyser A, Buysshaert C, Gielen J, Villarroel R, De Clercq R, Van Montagu M, Rogers J, Cronin A, Quail M, Bray-Allen S, Clark L, Doggett J, Hall S, Kay M, Lennard N, McLay K, Mayes R, Pettett A, Rajandream M A, Lyne M, Benes V, Rechmann S, Borkova D, Bl\u00f6cker H, Scharfe M, Grimm M, L\u00f6hnert T H, Dose S, de Haan M, Maarse A, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Fartmann B, Granderath K, Dauner D, Herzl A, Neumann S, Argiriou A, Vitale D, Liguori R, Piravandi E, Massenet O, Quigley F, Clabauld G, M\u00fcndlein A, Felber R, Schnabl S, Hiller R, Schmidt W, Lecharny A, Aubourg S, Chefdor F, Cooke R, Berger C, Montfort A, Casacuberta E, Gibbons T, Weber N, Vandenbol M, Bargues M, Terol J, Torres A, Perez-Perez A, Purnelle B, Bent E, Johnson S, Tacon D, Jesse T, Heijnen L, Schwarz S, Scholler P, Heber S, Francs P, Bielke C, Frishman D, Haase D, Lemcke K, Mewes H W, Stocker S, Zaccaria P, Bevan M, Wilson R K, de la Bastide M, Habermann K, Parnell L, Dedhia N, Gnoj L, Schutz K, Huang E, Spiegel L, Sehkon M, Murray J, Sheet P, Cordes M, Abu-Threideh J, Stoneking T, Kalicki J, Graves T, Harmon G, Edwards J, Latreille P, Courtney L, Cloud J, Abbott A, Scott K, Johnson D, Minx P, Bentley D, Fulton B, Miller N, Greco T, Kemp K, Kramer J, Fulton L, Mardis E, Dante M, Pepin K, Hillier L, Nelson J, Spieth J, Ryan E, Andrews S, Geisel C, Layman D, Du H, Ali J, Berghoff A, Jones K, Drone K, Cotton M, Joshu C, Antonoiu B, Zidanic M, Strong C, Sun H, Lamar B, Yordan C, Ma P, Zhong J, Preston R, Vil D, Shekher M, Matero A, Shah R, Swaby I K, O'Shaughnessy A, Rodriguez M, Hoffmann J, Till S, Granat S, Shohdy N, Hasegawa A, Hameed A, Lodhi M, Johnson A, Chen E, Marra M, Martienssen R, McCombie W R", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8B806", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B806" } ], "reference": [ { "type": "PubMed", "id": "10617198", "url": "https://glygen.org/publication/PubMed/10617198" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8B806", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B806" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT4G27790", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT4G27790", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A3L7IID9-1", "protein_name": "Calumenin", "gene_name": "Calu", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MDLRQFLLCLSLCTAFALSKPTEKKDRVHHEPQLSDKVHNDAQNFDYDHDAFLGAEEAKTFDQLTPEESKERLGKIVSKIDGDKDGFVTVDELKGWIKFAQKRWIHEDVERQWKGHDLNEDGLVSWEEYKNATYGYALDDPDPDDGFNYKQMMVRDERRFKMADKDGDLIATKEEFTAFLHPEEYDYMKDIVVQETMEDIDKNADGFIDLEEYIGDMYSHDGNADEPEWVKTEREQFVEFRDKNRDGKMDKEETKDWILPSDYDHAEAEARHLVYESDQNKDGKLTKEEIVDKYDLFVGSQATDFGEALVRHDEF", "length": 315 }, "evidence": [ { "id": "Q9STP7", "url": "https://omabrowser.org/oma/group/Q9STP7/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0AAA9TZ84-1", "protein_name": "Calumenin", "gene_name": "CALU", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "TKESDLVIMDLRQFLMCLSLCTAFALSKPTEKKDRVHHEPQLSDKVHNDAQSFDYDHDAFLGAEEAKTFDQLTPEESKERLGMIVDKIDADKDGFVTEGELKSWIKHAQKKYIYDNVENQWQEFDLNQDGLISWDEYRNVTYGTYLDDPDPDDGFNYKQMMVRDERRFKMADKDGDLIATKEEFTAFLHPEEYDYMKDIVVQETMEDIDKNADGFIDLEEYIGDMYSHDGNADEPEWVKTEREQFVEFRDKNRDGKMDKEETKDWILPSDYDHAEAEARHLVYESDQNKDGKLTKEEIVDKYDLFVGSQATDFGEALVRHDEF", "length": 323 }, "evidence": [ { "id": "Q9STP7", "url": "https://omabrowser.org/oma/group/Q9STP7/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "O35887-1", "protein_name": "Calumenin", "gene_name": "Calu", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDLRQFLMCLSLCTAFALSKPTEKKDRVHHEPQLSDKVHNDAQNFDYDHDAFLGAEEAKSFDQLTPEESKERLGKIVSKIDDDKDGFVTVDELKGWIKFAQKRWIHEDVERQWKGHDLNEDGLVSWEEYKNATYGYVLDDPDPDDGFNYKQMMVRDERRFKMADKDGDLIATKEEFTAFLHPEEYDYMKDIVVQETMEDIDKNADGFIDLEEYIGDMYSHDGNADEPEWVKTEREQFVEFRDKNRDGKMDKEETKDWILPSDYDHAEAEARHLVYESDQNKDGKLTKEEIVDKYDLFVGSQATDFGEALVRHDEF", "length": 315 }, "evidence": [ { "id": "Q9STP7", "url": "https://omabrowser.org/oma/group/Q9STP7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "O43852-1", "protein_name": "Calumenin", "gene_name": "CALU", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MDLRQFLMCLSLCTAFALSKPTEKKDRVHHEPQLSDKVHNDAQSFDYDHDAFLGAEEAKTFDQLTPEESKERLGKIVSKIDGDKDGFVTVDELKDWIKFAQKRWIYEDVERQWKGHDLNEDGLVSWEEYKNATYGYVLDDPDPDDGFNYKQMMVRDERRFKMADKDGDLIATKEEFTAFLHPEEYDYMKDIVVQETMEDIDKNADGFIDLEEYIGDMYSHDGNTDEPEWVKTEREQFVEFRDKNRDGKMDKEETKDWILPSDYDHAEAEARHLVYESDQNKDGKLTKEEIVDKYDLFVGSQATDFGEALVRHDEF", "length": 315 }, "evidence": [ { "id": "Q9STP7", "url": "https://omabrowser.org/oma/group/Q9STP7/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q6IQP3-1", "protein_name": "Calumenin-A", "gene_name": "calua", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MEIRPLLMCFALCVVYATSKPTEKKDRVHHDAPLSSKEHDDGTNFEYDHDAFLGEEEAKTFDDLTPEESKNRLGKIVEKIDADEDGFVTEAELKAWIKKAQKKYIYDNVERQWKDFDLNNDRMISWEEYKNVTYGTYLDDPEPDDGYNYKQMMARDERRFKMADGNGDHIADKEEFTAFLHPEEYEHMKDIVVLETMEDIDKNGDGFIDLEEYIGDMYNHEDEMDEPEWVATEREQFSEFRDKNKDGKMDREETMDWILPADYDHAEAEAKHLVYESDTNKDGKLTKEEILNKYDLFVGSQATDFGEALVRHDEF", "length": 315 }, "evidence": [ { "id": "Q9STP7", "url": "https://omabrowser.org/oma/group/Q9STP7/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q9W0H8-1", "protein_name": "Reticulocalbin-3", "gene_name": "scf", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": 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"AT4G13330.2", "url": "https://www.ensemblgenomes.org/id/AT4G13330.2" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "other", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 246, "start_aa": "Thr", "end_pos": 246, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr246", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ], "filter_code": "000000000000000010000.00000000001000.0.01000" } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "1999", "authors": "Mayer K, Sch\u00fcller C, Wambutt R, Murphy G, Volckaert G, Pohl T, D\u00fcsterh\u00f6ft A, Stiekema W, Entian K D, Terryn N, Harris B, Ansorge W, Brandt P, Grivell L, Rieger M, Weichselgartner M, de Simone V, Obermaier B, Mache R, M\u00fcller M, Kreis M, Delseny M, Puigdomenech P, Watson M, Schmidtheini T, Reichert B, Portatelle D, Perez-Alonso M, Boutry M, Bancroft I, Vos P, Hoheisel J, Zimmermann W, Wedler H, Ridley P, Langham S A, McCullagh B, Bilham L, Robben J, Van der Schueren J, Grymonprez B, Chuang Y J, Vandenbussche F, Braeken M, Weltjens I, Voet M, Bastiaens I, Aert R, Defoor E, Weitzenegger T, Bothe G, Ramsperger U, Hilbert H, Braun M, Holzer E, Brandt A, Peters S, van Staveren M, Dirske W, Mooijman P, Klein Lankhorst R, Rose M, Hauf J, K\u00f6tter P, Berneiser S, Hempel S, Feldpausch M, Lamberth S, Van den Daele H, De Keyser A, Buysshaert C, Gielen J, Villarroel R, De Clercq R, Van Montagu M, Rogers J, Cronin A, Quail M, Bray-Allen S, Clark L, Doggett J, Hall S, Kay M, Lennard N, McLay K, Mayes R, Pettett A, Rajandream M A, Lyne M, Benes V, Rechmann S, Borkova D, Bl\u00f6cker H, Scharfe M, Grimm M, L\u00f6hnert T H, Dose S, de Haan M, Maarse A, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Fartmann B, Granderath K, Dauner D, Herzl A, Neumann S, Argiriou A, Vitale D, Liguori R, Piravandi E, Massenet O, Quigley F, Clabauld G, M\u00fcndlein A, Felber R, Schnabl S, Hiller R, Schmidt W, Lecharny A, Aubourg S, Chefdor F, Cooke R, Berger C, Montfort A, Casacuberta E, Gibbons T, Weber N, Vandenbol M, Bargues M, Terol J, Torres A, Perez-Perez A, Purnelle B, Bent E, Johnson S, Tacon D, Jesse T, Heijnen L, Schwarz S, Scholler P, Heber S, Francs P, Bielke C, Frishman D, Haase D, Lemcke K, Mewes H W, Stocker S, Zaccaria P, Bevan M, Wilson R K, de la Bastide M, Habermann K, Parnell L, Dedhia N, Gnoj L, Schutz K, Huang E, Spiegel L, Sehkon M, Murray J, Sheet P, Cordes M, Abu-Threideh J, Stoneking T, Kalicki J, Graves T, Harmon G, Edwards J, Latreille P, Courtney L, Cloud J, Abbott A, Scott K, Johnson D, Minx P, Bentley D, Fulton B, Miller N, Greco T, Kemp K, Kramer J, Fulton L, Mardis E, Dante M, Pepin K, Hillier L, Nelson J, Spieth J, Ryan E, Andrews S, Geisel C, Layman D, Du H, Ali J, Berghoff A, Jones K, Drone K, Cotton M, Joshu C, Antonoiu B, Zidanic M, Strong C, Sun H, Lamar B, Yordan C, Ma P, Zhong J, Preston R, Vil D, Shekher M, Matero A, Shah R, Swaby I K, O'Shaughnessy A, Rodriguez M, Hoffmann J, Till S, Granat S, Shohdy N, Hasegawa A, Hameed A, Lodhi M, Johnson A, Chen E, Marra M, Martienssen R, McCombie W R", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8B8V1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B8V1" } ], "reference": [ { "type": "PubMed", "id": "10617198", "url": "https://glygen.org/publication/PubMed/10617198" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town 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"https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT4G01960", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "A0A1P8B975", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B975", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A1P8B975-1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B975-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9SYJ3", "url": "https://www.uniprot.org/uniprotkb/Q9SYJ3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9SYJ3-1", "url": "https://www.uniprot.org/uniprotkb/Q9SYJ3-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MDQIVSGEEEDLDVDIEDGRFNETQEITTNLVSAEGDSENVLNHVWSGRLSFDGSEKSADDLVDPLMGEGKRRERSSQSLDLSDMKFDNDKFKKTRKPSKPPRPPKGPLLSANDQKLMREITELAMRKRARIERMKTLRRLKAAKSSSPCSSIFAMIVTVIFFVFLIFQGFFTSNASLNSDNSPAPNNSANNRMVSVQFYNEFAPRERIDPSPTTSFRYKRVSGADNEENTREVTR", "length": 236, "header": "tr|Q9SYJ3-1|Q9SYJ3_ARATH Isoform 1 of Transmembrane protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SYJ3-1" }, "isoforms": [ { "isoform_ac": "A0A1P8B975-1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B975/entry", "sequence": { "sequence": "MDQIVSGEEEDLDVDIEDGRFNETQEITTNLVSAEGDSENVLNHVWSGRLSFDGSEKSADDLVDPLMGEGKRRERSSQSLDLSDMKFDNDKFKKTRKPSKPPRPPKGPLLSANDQKLMREITELAMRKRARIERMKTLRRLKAAKSSSPCSSIFAMIVTVIFFVFLIFQGNHHWNQDLWSNVLLGLSFRFYVFARAC", "length": 197, "header": "tr|A0A1P8B975-1|Q9SYJ3_ARATH Computationally mapped isoform of Transmembrane protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SYJ3-1" }, "locus": { "chromosome": "4", "start_pos": 851053, "end_pos": 853238, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT4G01960.3", "url": "https://www.ensemblgenomes.org/id/AT4G01960.3" }, { "database": "Ensembl Peptide", "id": "AT4G01960.3", "url": "https://www.ensemblgenomes.org/id/AT4G01960.3" } ] } }, { "isoform_ac": "Q9SYJ3-1", "url": "https://www.uniprot.org/uniprotkb/Q9SYJ3/entry", "sequence": { "sequence": "MDQIVSGEEEDLDVDIEDGRFNETQEITTNLVSAEGDSENVLNHVWSGRLSFDGSEKSADDLVDPLMGEGKRRERSSQSLDLSDMKFDNDKFKKTRKPSKPPRPPKGPLLSANDQKLMREITELAMRKRARIERMKTLRRLKAAKSSSPCSSIFAMIVTVIFFVFLIFQGFFTSNASLNSDNSPAPNNSANNRMVSVQFYNEFAPRERIDPSPTTSFRYKRVSGADNEENTREVTR", "length": 236, "header": "tr|Q9SYJ3-1|Q9SYJ3_ARATH Isoform 1 of Transmembrane protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SYJ3-1" }, "locus": { "chromosome": "4", "start_pos": 850914, "end_pos": 853329, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT4G01960.2", "url": "https://www.ensemblgenomes.org/id/AT4G01960.2" }, { "database": "Ensembl Peptide", "id": "AT4G01960.2", "url": "https://www.ensemblgenomes.org/id/AT4G01960.2" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "other", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 214, "start_aa": "Thr", "end_pos": 214, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr214", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ], "filter_code": "000000000000000010000.00000000001000.0.01000" } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "1999", "authors": "Mayer K, Sch\u00fcller C, Wambutt R, Murphy G, Volckaert G, Pohl T, D\u00fcsterh\u00f6ft A, Stiekema W, Entian K D, Terryn N, Harris B, Ansorge W, Brandt P, Grivell L, Rieger M, Weichselgartner M, de Simone V, Obermaier B, Mache R, M\u00fcller M, Kreis M, Delseny M, Puigdomenech P, Watson M, Schmidtheini T, Reichert B, Portatelle D, Perez-Alonso M, Boutry M, Bancroft I, Vos P, Hoheisel J, Zimmermann W, Wedler H, Ridley P, Langham S A, McCullagh B, Bilham L, Robben J, Van der Schueren J, Grymonprez B, Chuang Y J, Vandenbussche F, Braeken M, Weltjens I, Voet M, Bastiaens I, Aert R, Defoor E, Weitzenegger T, Bothe G, Ramsperger U, Hilbert H, Braun M, Holzer E, Brandt A, Peters S, van Staveren M, Dirske W, Mooijman P, Klein Lankhorst R, Rose M, Hauf J, K\u00f6tter P, Berneiser S, Hempel S, Feldpausch M, Lamberth S, Van den Daele H, De Keyser A, Buysshaert C, Gielen J, Villarroel R, De Clercq R, Van Montagu M, Rogers J, Cronin A, Quail M, Bray-Allen S, Clark L, Doggett J, Hall S, Kay M, Lennard N, McLay K, Mayes R, Pettett A, Rajandream M A, Lyne M, Benes V, Rechmann S, Borkova D, Bl\u00f6cker H, Scharfe M, Grimm M, L\u00f6hnert T H, Dose S, de Haan M, Maarse A, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Fartmann B, Granderath K, Dauner D, Herzl A, Neumann S, Argiriou A, Vitale D, Liguori R, Piravandi E, Massenet O, Quigley F, Clabauld G, M\u00fcndlein A, Felber R, Schnabl S, Hiller R, Schmidt W, Lecharny A, Aubourg S, Chefdor F, Cooke R, Berger C, Montfort A, Casacuberta E, Gibbons T, Weber N, Vandenbol M, Bargues M, Terol J, Torres A, Perez-Perez A, Purnelle B, Bent E, Johnson S, Tacon D, Jesse T, Heijnen L, Schwarz S, Scholler P, Heber S, Francs P, Bielke C, Frishman D, Haase D, Lemcke K, Mewes H W, Stocker S, Zaccaria P, Bevan M, Wilson R K, de la Bastide M, Habermann K, Parnell L, Dedhia N, Gnoj L, Schutz K, Huang E, Spiegel L, Sehkon M, Murray J, Sheet P, Cordes M, Abu-Threideh J, Stoneking T, Kalicki J, Graves T, Harmon G, Edwards J, Latreille P, Courtney L, Cloud J, Abbott A, Scott K, Johnson D, Minx P, Bentley D, Fulton B, Miller N, Greco T, Kemp K, Kramer J, Fulton L, Mardis E, Dante M, Pepin K, Hillier L, Nelson J, Spieth J, Ryan E, Andrews S, Geisel C, Layman D, Du H, Ali J, Berghoff A, Jones K, Drone K, Cotton M, Joshu C, Antonoiu B, Zidanic M, Strong C, Sun H, Lamar B, Yordan C, Ma P, Zhong J, Preston R, Vil D, Shekher M, Matero A, Shah R, Swaby I K, O'Shaughnessy A, Rodriguez M, Hoffmann J, Till S, Granat S, Shohdy N, Hasegawa A, Hameed A, Lodhi M, Johnson A, Chen E, Marra M, Martienssen R, McCombie W R", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8B975", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B975" } ], "reference": [ { "type": "PubMed", "id": "10617198", "url": "https://glygen.org/publication/PubMed/10617198" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8B975", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B975" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": 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"MAEEQREISHENNVSLGSAETAIPLTNVSISPTKKEEQKTVYLVLFGRTIYVESSSLESEETVMPIVDVPKSPAKEDLTTHCSLDAESSEKGFPVDPYMGILGNNPNINSNVTCAGNKDLTEDIIKFKKMRSLSKEKIVEEKGTRVLTELPPYTWTIKKTLKESDINHQCRLLLNTTDAENHIMRHLPTDDQKKIQEGIGVDVKAYDHDTYTEHDMVFKRHVKTSKSYVFNGGWAKAFVGRRELKEGDKIGLFWAKKSQTFMSQEQQGTSPLNTDEALKSHHSFSQNPNYIESNLSRRYQTNFSLGSQRISGQFLMIPNPGFVDTSSMTNTHDTSLANFQTVPTTTNPKIILKEEKENEEEQQYWTIKKELTKSDACQRLTLSKSSVEEHILKHLLPEDSQKIDKGKPGITVKVYDNDTDTEHELCLAFQCSYVLKNGWVKTFVKRRGLEEGDMIGLFWECSTSKLHFSVLFRVNAKAPAAEEKEAY", "length": 487, "header": "sp|Q9SYL8-1|Y1786_ARATH Isoform 1 of Putative B3 domain-containing protein At1g78640 OS=Arabidopsis thaliana OX=3702 GN= PE=3 SV=1 CANONICAL=Q9SYL8-1" }, "isoforms": [ { "isoform_ac": "A0A2H1ZEG8-1", "url": "https://www.uniprot.org/uniprotkb/A0A2H1ZEG8/entry", "sequence": { "sequence": "MAEEQREISHENNVSLGSAETAIPLTNVSISPTKKEEQKTVYLVLFGRTIYVESSSLESEETVMPIVDVPKSPAKEDLTTHCSLDAESSEKGFPVDPYMGILGNNPNINSNVTCAGNKDLTEDIIKFKKMRSLSKEKIVEEKGTRVLTELPPYTWTIKKTLKESDINHQCRLLLNTTDAENHIMRHLPTDDQKKIQEGIGVDVKAYDHDTYTEHDMVFKRHVKTSKSYVFNGGWAKAFVGRRELKEGDKIGLFWGNVDSRIHFSVLERKIPN", "length": 272, "header": "tr|A0A2H1ZEG8-1|Y1786_ARATH Computationally mapped isoform of Putative B3 domain-containing protein At1g78640 OS=Arabidopsis thaliana OX=3702 GN= PE=3 SV=1 CANONICAL=Q9SYL8-1" }, "locus": { "chromosome": "1", "start_pos": 29581170, "end_pos": 29581988, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT1G78640.1", "url": "https://www.ensemblgenomes.org/id/AT1G78640.1" }, { "database": "Ensembl Peptide", "id": "AT1G78640.1", "url": "https://www.ensemblgenomes.org/id/AT1G78640.1" } ] } }, { "isoform_ac": "Q9SYL8-1", "url": "https://www.uniprot.org/uniprotkb/Q9SYL8/entry#Q9SYL8-1", "sequence": { "sequence": "MAEEQREISHENNVSLGSAETAIPLTNVSISPTKKEEQKTVYLVLFGRTIYVESSSLESEETVMPIVDVPKSPAKEDLTTHCSLDAESSEKGFPVDPYMGILGNNPNINSNVTCAGNKDLTEDIIKFKKMRSLSKEKIVEEKGTRVLTELPPYTWTIKKTLKESDINHQCRLLLNTTDAENHIMRHLPTDDQKKIQEGIGVDVKAYDHDTYTEHDMVFKRHVKTSKSYVFNGGWAKAFVGRRELKEGDKIGLFWAKKSQTFMSQEQQGTSPLNTDEALKSHHSFSQNPNYIESNLSRRYQTNFSLGSQRISGQFLMIPNPGFVDTSSMTNTHDTSLANFQTVPTTTNPKIILKEEKENEEEQQYWTIKKELTKSDACQRLTLSKSSVEEHILKHLLPEDSQKIDKGKPGITVKVYDNDTDTEHELCLAFQCSYVLKNGWVKTFVKRRGLEEGDMIGLFWECSTSKLHFSVLFRVNAKAPAAEEKEAY", "length": 487, "header": "sp|Q9SYL8-1|Y1786_ARATH Isoform 1 of Putative B3 domain-containing protein At1g78640 OS=Arabidopsis thaliana OX=3702 GN= PE=3 SV=1 CANONICAL=Q9SYL8-1" }, "locus": {} } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Theologis A, Ecker J R, Palm C J, Federspiel N A, Kaul S, White O, Alonso J, Altafi H, Araujo R, Bowman C L, Brooks S Y, Buehler E, Chan A, Chao Q, Chen H, Cheuk R F, Chin C W, Chung M K, Conn L, Conway A B, Conway A R, Creasy T H, Dewar K, Dunn P, Etgu P, Feldblyum T V, Feng J, Fong B, Fujii C Y, Gill J E, Goldsmith A D, Haas B, Hansen N F, Hughes B, Huizar L, Hunter J L, Jenkins J, Johnson-Hopson C, Khan S, Khaykin E, Kim C J, Koo H L, Kremenetskaia I, Kurtz D B, Kwan A, Lam B, Langin-Hooper S, Lee A, Lee J M, Lenz C A, Li J H, Li Y, Lin X, Liu S X, Liu Z A, Luros J S, Maiti R, Marziali A, Militscher J, Miranda M, Nguyen M, Nierman W C, Osborne B I, Pai G, Peterson J, Pham P K, Rizzo M, Rooney T, Rowley D, Sakano H, Salzberg S L, Schwartz J R, Shinn P, Southwick A M, Sun H, Tallon L J, Tambunga G, Toriumi M J, Town C D, Utterback T, Van Aken S, Vaysberg M, Vysotskaia V S, Walker M, Wu D, Yu G, Fraser C M, Venter J C, Davis R W", "evidence": [ { "database": "UniProtKB", "id": "A0A2H1ZEG8", "url": "https://www.uniprot.org/uniprotkb/A0A2H1ZEG8" } ], "reference": [ { "type": "PubMed", "id": "11130712", "url": "https://glygen.org/publication/PubMed/11130712" } ] }, { "title": "The plant B3 superfamily.", "journal": "Trends Plant Sci.", "date": "2008", "authors": "Swaminathan Kankshita, Peterson Kevin, Jack Thomas", "evidence": [ { "database": "UniProtKB", "id": "Q9SYL8", "url": "https://www.uniprot.org/uniprotkb/Q9SYL8" } ], "reference": [ { "type": "PubMed", "id": "18986826", "url": "https://glygen.org/publication/PubMed/18986826" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "A0A2H1ZEG8", "url": "https://www.uniprot.org/uniprotkb/A0A2H1ZEG8" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT1G78640", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT1G78640", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "DNA binding", "id": "GO:0003677", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003677", "evidence": [ { "database": "UniProtKB", "id": "Q9SYL8", "url": "https://www.uniprot.org/uniprotkb/Q9SYL8" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q9SYL8", "url": "https://www.uniprot.org/uniprotkb/Q9SYL8" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "DNA-templated transcription", "id": "GO:0006351", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006351", "evidence": [ { "database": "UniProtKB", "id": "Q9SYL8", "url": "https://www.uniprot.org/uniprotkb/Q9SYL8" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 111, "end_pos": 113, "annotation": "n_glycosylation_sequon" }, { "start_pos": 13, "end_pos": 15, "annotation": "n_glycosylation_sequon" }, { "start_pos": 175, "end_pos": 177, "annotation": "n_glycosylation_sequon" }, { "start_pos": 27, "end_pos": 29, "annotation": "n_glycosylation_sequon" }, { "start_pos": 294, "end_pos": 296, "annotation": "n_glycosylation_sequon" }, { "start_pos": 302, "end_pos": 304, "annotation": "n_glycosylation_sequon" }, { "start_pos": 417, "end_pos": 419, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-Q9SYL8-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 487, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-Q9SYL8-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/Q9SYL8" } ], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 111, "end_pos": 113 }, { "start_pos": 13, "end_pos": 15 }, { "start_pos": 175, "end_pos": 177 }, { "start_pos": 27, "end_pos": 29 }, { "start_pos": 294, "end_pos": 296 }, { "start_pos": 302, "end_pos": 304 }, { "start_pos": 417, "end_pos": 419 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { 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"Protein Classification" ] }, { "id": "IPR036047", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036047", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR050232", "url": "https://www.ebi.ac.uk/interpro/entry/IPR050232", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR053781", "url": "https://www.ebi.ac.uk/interpro/entry/IPR053781", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR055411", "url": "https://www.ebi.ac.uk/interpro/entry/IPR055411", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT3G49040", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G49040", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "NESEWWN", "url": "https://omabrowser.org/oma/group/NESEWWN/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR31900", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31900", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR31900:SF34", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31900:SF34", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00646", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00646", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF08387", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF08387", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF24758", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF24758", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PR:Q9SMU1", "url": "https://proconsortium.org/cgi-bin/entry_pro?id=PR:Q9SMU1", "database": "PRO", "categories": [ "Protein" ] }, { "id": "AT3G49040", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G49040", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "A0A2H1ZEK7", "url": "https://www.uniprot.org/uniprotkb/A0A2H1ZEK7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A2H1ZEK7-1", "url": "https://www.uniprot.org/uniprotkb/A0A2H1ZEK7-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9SMU1", "url": "https://www.uniprot.org/uniprotkb/Q9SMU1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9SMU1-1", "url": "https://www.uniprot.org/uniprotkb/Q9SMU1-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MEQLWLFENEDRISELHEALLVHIMSSLPTKTVVATSVLSKRWRHVWKTVQNLKFVSKYHQTFSEDVYRFFMLHKAPFLESLDLEFSNQLDASDLGILVGIAFARHVRNLVLDLDYYSNFSQLCAARFPSGLCIYDNNKTLETLTLKHSILLYFPYRVCLKSLRKLHLYKVHFYGKDSVYNLLCGCPSLRDLIVHRYRECMETFTIAVPSLERLTIEDSGFGYGCCYVINAPSLKYLNIRRFKYLNSCLIEKAPELAEAKVSDVSDIENENILESLTSAKRLSIHLSPLEWWNLLTFMLEASPKLQILKLTDLNMSSTKGNQIGQKWIQPKCVPECLLFHLETFVWTGYEWQRRDEKEVARYILRNTTSLKKATFSTKPIEPVKLKVFKKRREILNELASLGRASNPSDFVFESI", "length": 415, "header": "sp|Q9SMU1-1|FDL19_ARATH Isoform 1 of Putative F-box/FBD/LRR-repeat protein At3g49040 OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=2 CANONICAL=Q9SMU1-1" }, "isoforms": [ { "isoform_ac": "A0A2H1ZEK7-1", "url": "https://www.uniprot.org/uniprotkb/A0A2H1ZEK7/entry", "sequence": { "sequence": "MEQLCGGDCLRLFENEDRISELHEALLVHIMSSLPTKTVVATSVLSKRWRHVWKTVQNLKFVSKYHQTFSEDVYRFFMLHKAPFLESLDLEFSNQLDASDLGILVGIAFARHVRNLVLDLDYYSNFSQLCAARFPSGLCIYDNNKTLETLTLKHSILLYFPYRVCLKSLRKLHLYKVHFYGKDSVYNLLCGCPSLRDLIVHRYRECMETFTIAVPSLERLTIEDSGFGYGCCYVINAPSLKYLNIRRFKYLNSCLIEKAPELAEAKVSDVSDIENENILESLTSAKRLSIHLSPLEIKYPSGSIFHQLLSL", "length": 311, "header": "tr|A0A2H1ZEK7-1|FDL19_ARATH Computationally mapped isoform of Putative F-box/FBD/LRR-repeat protein At3g49040 OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9SMU1-1" }, "locus": { "chromosome": "3", "start_pos": 18177482, "end_pos": 18178839, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G49040.1", "url": "https://www.ensemblgenomes.org/id/AT3G49040.1" }, { "database": "Ensembl Peptide", "id": "AT3G49040.1", "url": "https://www.ensemblgenomes.org/id/AT3G49040.1" } ] } }, { "isoform_ac": "Q9SMU1-1", "url": "https://www.uniprot.org/uniprotkb/Q9SMU1/entry#Q9SMU1-1", "sequence": { "sequence": "MEQLWLFENEDRISELHEALLVHIMSSLPTKTVVATSVLSKRWRHVWKTVQNLKFVSKYHQTFSEDVYRFFMLHKAPFLESLDLEFSNQLDASDLGILVGIAFARHVRNLVLDLDYYSNFSQLCAARFPSGLCIYDNNKTLETLTLKHSILLYFPYRVCLKSLRKLHLYKVHFYGKDSVYNLLCGCPSLRDLIVHRYRECMETFTIAVPSLERLTIEDSGFGYGCCYVINAPSLKYLNIRRFKYLNSCLIEKAPELAEAKVSDVSDIENENILESLTSAKRLSIHLSPLEWWNLLTFMLEASPKLQILKLTDLNMSSTKGNQIGQKWIQPKCVPECLLFHLETFVWTGYEWQRRDEKEVARYILRNTTSLKKATFSTKPIEPVKLKVFKKRREILNELASLGRASNPSDFVFESI", "length": 415, "header": "sp|Q9SMU1-1|FDL19_ARATH Isoform 1 of Putative F-box/FBD/LRR-repeat protein At3g49040 OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=2 CANONICAL=Q9SMU1-1" }, "locus": {} } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, 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H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "A8MQJ2", "url": "https://www.uniprot.org/uniprotkb/A8MQJ2" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "A8MQJ2", "url": 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"https://www.uniprot.org/uniprotkb/Q9SLA6-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MFRRLILRQAAAVAAESKIACHHTVHGFEQRRGLHSRNEKAMEYVAKGWSAIKEVERVIDYCELNDRRLIPLLRGAKENFELALEADNLNTHARYWLSKLHLKYHVPGACKAVGAALLVEAADMGNADAQYELGCRLRVENDHVQSDQQAFHYIENAVDQLHPGALYLLGIVYLTGDCVKQDVDSAIWCFHRASEKGHAGAAIAYGSLLLRGVQVPESLTKLNVVGVSPPKRARKNLENPEMNPLEMAKEQFQIAARAGCDLGLKWLQRVEQEEKLLMREQDNECAYV", "length": 288, "header": "tr|Q9SLA6-1|Q9SLA6_ARATH Isoform 1 of Binding protein OS=Arabidopsis thaliana OX=3702 GN=ISE3 PE=1 SV=1 CANONICAL=Q9SLA6-1" }, "isoforms": [ { "isoform_ac": "A8MQN8-1", "url": "https://www.uniprot.org/uniprotkb/A8MQN8/entry", "sequence": { "sequence": "MIVVLFLSSGYWLSKLHLKYHVPGACKAVGAALLVEAADMGNADAQYELGCRLRVENDHVQSDQQAFHYIENAVDQLHPGALYLLGIVYLTGDCVKQDVDSAIWCFHRASEKGHAGAAIAYGSLLLRGVQVPESLTKLNVVGVSPPKRARKNLENPEMNPLEMAKEQFQIAARAGCDLGLKWLQRVEQEEKLLMREQDNECAYV", "length": 204, "header": "tr|A8MQN8-1|Q9SLA6_ARATH Computationally mapped isoform of Binding protein OS=Arabidopsis thaliana OX=3702 GN=ISE3 PE=1 SV=1 CANONICAL=Q9SLA6-1" }, "locus": { "chromosome": "2", "start_pos": 10885698, "end_pos": 10887921, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT2G25570.2", "url": "https://www.ensemblgenomes.org/id/AT2G25570.2" }, { "database": "Ensembl Peptide", "id": "AT2G25570.2", "url": "https://www.ensemblgenomes.org/id/AT2G25570.2" } ] } }, { "isoform_ac": "Q8RUZ7-1", "url": "https://www.uniprot.org/uniprotkb/Q8RUZ7/entry", "sequence": { "sequence": "METGDMKFAITTKIFSQTTYLPLSLNNTVCIINLRQQFKRYVIDKSNGSITFNGLYPGPPLPISQIRLNLLNYKFTPFHLFPLLDSRLHDPSLSKYIAEVITGQASLSVGFLQRLFMFVNVVLTQEVFSVIPVSCLPKEETQEVEDESTCPICLENFLNDYVNDEVFSVIPKCAVENLWNDNDKNQITTNCHIVCIGFIKDISSSG", "length": 206, "header": "tr|Q8RUZ7-1|Q8RUZ7_ARATH Computationally mapped isoform of C3HC4-type RING finger protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9SLA6-1" }, "locus": { "chromosome": "2", "start_pos": 10884062, "end_pos": 10885295, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT2G25565.1", "url": "https://www.ensemblgenomes.org/id/AT2G25565.1" }, { "database": "Ensembl Peptide", "id": "AT2G25565.1", "url": "https://www.ensemblgenomes.org/id/AT2G25565.1" } ] } }, { "isoform_ac": "Q9SLA6-1", "url": "https://www.uniprot.org/uniprotkb/Q9SLA6/entry", "sequence": { "sequence": "MFRRLILRQAAAVAAESKIACHHTVHGFEQRRGLHSRNEKAMEYVAKGWSAIKEVERVIDYCELNDRRLIPLLRGAKENFELALEADNLNTHARYWLSKLHLKYHVPGACKAVGAALLVEAADMGNADAQYELGCRLRVENDHVQSDQQAFHYIENAVDQLHPGALYLLGIVYLTGDCVKQDVDSAIWCFHRASEKGHAGAAIAYGSLLLRGVQVPESLTKLNVVGVSPPKRARKNLENPEMNPLEMAKEQFQIAARAGCDLGLKWLQRVEQEEKLLMREQDNECAYV", "length": 288, "header": "tr|Q9SLA6-1|Q9SLA6_ARATH Isoform 1 of Binding protein OS=Arabidopsis thaliana OX=3702 GN=ISE3 PE=1 SV=1 CANONICAL=Q9SLA6-1" }, "locus": { "chromosome": "2", "start_pos": 10885643, "end_pos": 10887979, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT2G25570.1", "url": "https://www.ensemblgenomes.org/id/AT2G25570.1" }, { "database": "Ensembl Peptide", "id": "AT2G25570.1", "url": "https://www.ensemblgenomes.org/id/AT2G25570.1" } ] } } ], "glycosylation": [], "phosphorylation": [ { "start_pos": 24, "end_pos": 24, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Thr", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SLA6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SLA6" } ], "site_lbl": "Thr24" } ], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "1999", "authors": "Lin X, Kaul S, Rounsley S, Shea T P, Benito M I, Town C D, Fujii C Y, Mason T, Bowman C L, Barnstead M, Feldblyum T V, Buell C R, Ketchum K A, Lee J, Ronning C M, Koo H L, Moffat K S, Cronin L A, Shen M, Pai G, Van Aken S, Umayam L, Tallon L J, Gill J E, Adams M D, Carrera A J, Creasy T H, Goodman H M, Somerville C R, Copenhaver G P, Preuss D, Nierman W C, White O, Eisen J A, Salzberg S L, Fraser C M, Venter J C", "evidence": [ { "database": "UniProtKB", "id": "A8MQN8", "url": "https://www.uniprot.org/uniprotkb/A8MQN8" } ], "reference": [ { "type": "PubMed", "id": "10617197", "url": "https://glygen.org/publication/PubMed/10617197" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "A8MQN8", "url": "https://www.uniprot.org/uniprotkb/A8MQN8" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT2G25565", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT2G25565", "resource": "KEGG Pathway" }, { "id": "ath:AT2G25570", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT2G25570", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "extracellular region", "id": "GO:0005576", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005576", "evidence": [ { "database": "UniProtKB", "id": "Q9SLA6", "url": "https://www.uniprot.org/uniprotkb/Q9SLA6" } ], "pmid": "" }, { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "Q9SLA6", "url": "https://www.uniprot.org/uniprotkb/Q9SLA6" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 2, "go_terms": [ { "name": "intercellular transport", "id": "GO:0010496", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010496", "evidence": [ { "database": "UniProtKB", "id": "Q9SLA6", "url": "https://www.uniprot.org/uniprotkb/Q9SLA6" } ], "pmid": "" }, { "name": "protein ubiquitination", "id": "GO:0016567", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016567", "evidence": [ { "database": "UniProtKB", "id": "Q9SLA6", "url": "https://www.uniprot.org/uniprotkb/Q9SLA6" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [ 24 ], "sequon_annotation_sites": [] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 } ], "sort_fields": [ "start_pos", "end_pos", "kinase_uniprot_canonical_ac", "kinase_gene_name", "residue", "comment", "site_lbl" ] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "Q9SL16-1", "uniprot_ac": "Q9SL16", "uniprot_id": "Q9SL16_ARATH", "mass": { "chemical_mass": 11817.0, "monoisotopic_mass": 11817.0 }, "refseq": {}, "gene_names": [ { "name": "T20G20.14", "type": "synonym", "evidence": [ { "id": "Q9SL16", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SL16" } ] }, { "name": "T20G20_14", "type": "synonym", "evidence": [ { "id": "Q9SL16", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SL16" } ] } ], "protein_names": [ { "name": "Glycine-rich protein family", "type": "synonym", "evidence": [ { "id": "Q9SL16", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SL16/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9SL16", "url": "https://www.uniprot.org/uniprotkb/Q9SL16" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9SL16", "locus": {} } ], "crossref": [ { "id": "AT2G05510", "url": "https://bar.utoronto.ca/thalemine/portal.do?externalids=AT2G05510", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "815100", "url": "https://www.ncbi.nlm.nih.gov/gene/815100", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR010800", "url": "https://www.ebi.ac.uk/interpro/entry/IPR010800", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR053373", "url": "https://www.ebi.ac.uk/interpro/entry/IPR053373", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT2G05510", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT2G05510", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "PTHR36732", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR36732", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR36732:SF1", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR36732:SF1", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF07172", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF07172", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "AT2G05510", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT2G05510", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "A8MQZ5", "url": "https://www.uniprot.org/uniprotkb/A8MQZ5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A8MQZ5-1", "url": "https://www.uniprot.org/uniprotkb/A8MQZ5-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "B3H6I3", "url": "https://www.uniprot.org/uniprotkb/B3H6I3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "B3H6I3-1", "url": "https://www.uniprot.org/uniprotkb/B3H6I3-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "B3H726", "url": "https://www.uniprot.org/uniprotkb/B3H726", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "B3H726-1", "url": "https://www.uniprot.org/uniprotkb/B3H726-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F4IHA2", "url": "https://www.uniprot.org/uniprotkb/F4IHA2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F4IHA2-1", "url": "https://www.uniprot.org/uniprotkb/F4IHA2-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F4IHA4", "url": "https://www.uniprot.org/uniprotkb/F4IHA4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F4IHA4-1", "url": "https://www.uniprot.org/uniprotkb/F4IHA4-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9SL16", "url": "https://www.uniprot.org/uniprotkb/Q9SL16", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9SL16-1", "url": "https://www.uniprot.org/uniprotkb/Q9SL16-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MASKALILLGLFAILLVVSEVSAARQSGMVKPESEATVQPEGYHGGHGGHGGGGHYGGGGHGHGGHNGGGGHGLDGYGGGHGGHYGGGGGHYGGGGGHGGGGHYGGGGHHGGGGHGLNEPVQTKPGV", "length": 127, "header": "tr|Q9SL16-1|Q9SL16_ARATH Isoform 1 of Glycine-rich protein family OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9SL16-1" }, "isoforms": [ { "isoform_ac": "A8MQZ5-1", "url": "https://www.uniprot.org/uniprotkb/A8MQZ5/entry", "sequence": { "sequence": "MVKPESEATVQPEGYHGGHGGHGGGGHYGGGGHGHGGHNGGGGHGLDGYGGGHGGHYGGGGGHYGGGGGHGGGGHYGGGGHHGGGGHGLNEPVQTKPGV", "length": 99, "header": "tr|A8MQZ5-1|Q9SL16_ARATH Computationally mapped isoform of Glycine-rich protein family OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9SL16-1" }, "locus": { "chromosome": "2", "start_pos": 2015706, "end_pos": 2016726, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT2G05510.4", "url": "https://www.ensemblgenomes.org/id/AT2G05510.4" }, { "database": "Ensembl Peptide", "id": "AT2G05510.4", "url": "https://www.ensemblgenomes.org/id/AT2G05510.4" } ] } }, { "isoform_ac": "B3H6I3-1", "url": "https://www.uniprot.org/uniprotkb/B3H6I3/entry", "sequence": { "sequence": "MASKALILLGLFAILLVVSEVSAARQSGMVKPESEATVQPEGYHGGHGGHYGGGGGHYGGGGGHGGGGHYGGGGHHGGGGHGLNEPVQTKPGV", "length": 93, "header": "tr|B3H6I3-1|Q9SL16_ARATH Computationally mapped isoform of Glycine-rich protein family OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9SL16-1" }, "locus": { "chromosome": "2", "start_pos": 2015706, "end_pos": 2016749, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT2G05510.6", "url": "https://www.ensemblgenomes.org/id/AT2G05510.6" }, { "database": "Ensembl Peptide", "id": "AT2G05510.6", "url": "https://www.ensemblgenomes.org/id/AT2G05510.6" } ] } }, { "isoform_ac": "B3H726-1", "url": "https://www.uniprot.org/uniprotkb/B3H726/entry", "sequence": { "sequence": "MASKALILLGLFAILLVVSEVSAARQSGMVKPESEATVQPEGYHGGHGGHGGGGHYGGGGHGHGGHNGGGGHGGGGHYGGGGHHGGGGHGLNEPVQTKPGV", "length": 101, "header": "tr|B3H726-1|Q9SL16_ARATH Computationally mapped isoform of Glycine-rich protein family OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9SL16-1" }, "locus": { "chromosome": "2", "start_pos": 2015706, "end_pos": 2016749, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT2G05510.5", "url": "https://www.ensemblgenomes.org/id/AT2G05510.5" }, { "database": "Ensembl Peptide", "id": "AT2G05510.5", "url": "https://www.ensemblgenomes.org/id/AT2G05510.5" } ] } }, { "isoform_ac": "F4IHA2-1", "url": "https://www.uniprot.org/uniprotkb/F4IHA2/entry", "sequence": { "sequence": "MASKALILLGLFAILLVVSEVSAARQSGMVKPESEATVQPEGYHGGHGGHGGGGHYGGGGHGHGGHNGGGGGGGHGGGGHYGGGGHHGGGGHGLNEPVQTKPGV", "length": 104, "header": "tr|F4IHA2-1|F4IHA2_ARATH Computationally mapped isoform of Glycine-rich protein family OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9SL16-1" }, "locus": { "chromosome": "2", "start_pos": 2015706, "end_pos": 2016726, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT2G05510.2", "url": "https://www.ensemblgenomes.org/id/AT2G05510.2" }, { "database": "Ensembl Peptide", "id": "AT2G05510.2", "url": "https://www.ensemblgenomes.org/id/AT2G05510.2" } ] } }, { "isoform_ac": "F4IHA4-1", "url": "https://www.uniprot.org/uniprotkb/F4IHA4/entry", "sequence": { "sequence": "MASKALILLGLFAILLVVSEVSAARQSGMVKPESEATVQPEGYHGGHGGHGGGGHYGGGGHGGGGHYGGGGHHGGGGHGLNEPVQTKPGV", "length": 90, "header": "tr|F4IHA4-1|F4IHA4_ARATH Computationally mapped isoform of Glycine-rich protein family OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9SL16-1" }, "locus": { "chromosome": "2", "start_pos": 2015706, "end_pos": 2016725, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT2G05510.3", "url": "https://www.ensemblgenomes.org/id/AT2G05510.3" }, { "database": "Ensembl Peptide", "id": "AT2G05510.3", "url": "https://www.ensemblgenomes.org/id/AT2G05510.3" } ] } }, { "isoform_ac": "Q9SL16-1", "url": "https://www.uniprot.org/uniprotkb/Q9SL16/entry", "sequence": { "sequence": "MASKALILLGLFAILLVVSEVSAARQSGMVKPESEATVQPEGYHGGHGGHGGGGHYGGGGHGHGGHNGGGGHGLDGYGGGHGGHYGGGGGHYGGGGGHGGGGHYGGGGHHGGGGHGLNEPVQTKPGV", "length": 127, "header": "tr|Q9SL16-1|Q9SL16_ARATH Isoform 1 of Glycine-rich protein family OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9SL16-1" }, "locus": { "chromosome": "2", "start_pos": 2015624, "end_pos": 2016772, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT2G05510.1", "url": "https://www.ensemblgenomes.org/id/AT2G05510.1" }, { "database": "Ensembl Peptide", "id": "AT2G05510.1", "url": "https://www.ensemblgenomes.org/id/AT2G05510.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "1999", "authors": "Lin X, Kaul S, Rounsley S, Shea T P, Benito M I, Town C D, Fujii C Y, Mason T, Bowman C L, Barnstead M, Feldblyum T V, Buell C R, Ketchum K A, Lee J, Ronning C M, Koo H L, Moffat K S, Cronin L A, Shen M, Pai G, Van Aken S, Umayam L, Tallon L J, Gill J E, Adams M D, Carrera A J, Creasy T H, Goodman H M, Somerville C R, Copenhaver G P, Preuss D, Nierman W C, White O, Eisen J A, Salzberg S L, Fraser C M, Venter J C", "evidence": [ { "database": "UniProtKB", "id": "A8MQZ5", "url": "https://www.uniprot.org/uniprotkb/A8MQZ5" } ], "reference": [ { "type": "PubMed", "id": "10617197", "url": "https://glygen.org/publication/PubMed/10617197" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "A8MQZ5", "url": "https://www.uniprot.org/uniprotkb/A8MQZ5" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT2G05510", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT2G05510", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": {}, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "Q9SL80-1", "uniprot_ac": "Q9SL80", "uniprot_id": "Q9SL80_ARATH", "mass": { "chemical_mass": 106351.0, "monoisotopic_mass": 106351.0 }, "refseq": {}, "gene_names": [ { "name": "T2G17.19", "type": "synonym", "evidence": [ { "id": "Q9SL80", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SL80" } ] }, { "name": "T2G17_19", "type": "synonym", "evidence": [ { "id": "Q9SL80", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SL80" } ] } ], "protein_names": [ { "name": "Gls protein (DUF810)", "type": "synonym", "evidence": [ { "id": "Q9SL80", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SL80/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9SL80", "url": "https://www.uniprot.org/uniprotkb/Q9SL80" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9SL80", "locus": {} } ], "crossref": [ { "id": "AT2G20010", "url": "https://bar.utoronto.ca/thalemine/portal.do?externalids=AT2G20010", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "816520", "url": "https://www.ncbi.nlm.nih.gov/gene/816520", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR008528", "url": "https://www.ebi.ac.uk/interpro/entry/IPR008528", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR014770", "url": "https://www.ebi.ac.uk/interpro/entry/IPR014770", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR014772", "url": "https://www.ebi.ac.uk/interpro/entry/IPR014772", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR057984", "url": "https://www.ebi.ac.uk/interpro/entry/IPR057984", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT2G20010", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT2G20010", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "A8MR32", "url": "https://www.orthodb.org/?gene=A8MR32", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "Q9SL80", "url": "https://www.orthodb.org/?gene=Q9SL80", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR31280", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31280", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR31280:SF16", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31280:SF16", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF25761", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF25761", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF27629", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF27629", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "AT2G20010", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT2G20010", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "A8MR32", "url": "https://www.uniprot.org/uniprotkb/A8MR32", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A8MR32-1", "url": "https://www.uniprot.org/uniprotkb/A8MR32-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9SL80", "url": "https://www.uniprot.org/uniprotkb/Q9SL80", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9SL80-1", "url": "https://www.uniprot.org/uniprotkb/Q9SL80-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MESLPSPFGDPAPNLSNSELRETAYEILVAACRSTGSRPLTYIPQSPKSDRSNGLTTASLSPSPSLHRSLTSTAASKVKKALGMKKRIGDGDGGAGESSSQPDRSKKSVTVGELVRVQMRISEQIDSRIRRALLRIASGQLGRRVEMMVLPLELLQQLKASDFPDQEEYESWQRRNLKLLEAGLILYPCVPLSKSDKSVQQLKQIIRSGLERPLDTGKITGETQNLRSLVMSLASRQNNNGIGSETCHWADGFPLNLRIYQMLLESCFDVNDELLIVEEVDEVLELIKKTWPVLGINQMIHNVCFLWVLVNRYVSTGQVENDLLVAAHNLILEIENDAMETNDPEYSKILSSVLSLVMDWGEKRLLAYHDTFNIDNVETLETTVSLGILVAKVLGEDISSEYRRKKKHVDSGRDRVDTYIRSSLRMAFQQTKRMVEHSKKSKSRQSTNNLPALAILAEDIGHLAFNEKAIFSPILKNWHPLAAGVAAATLHSCYGTELKKFVSGITELTPDAIRVLTAADKLEKDLVQIAVQDAVDSEDGGKSVIREMPPFEAEVVIGNLVKSWIKIRVDRLKEWIDRNLQQEVWNPRSNKLGIAPSAVDVLRMVDETLEAFFLLPILLHPVLLPELTSGLDKCMQHYVSKAKSSCGSRNTFLPVLPALTRCTVGSRLHGVFKKKEKPMVASHRRKSQLGTGNDSAEILQFCCRINTLQYIRTEIESSGRKTLNRLPESEVAALDAKGKIFEQSISYCSKGIQQLSEATAYKIVFHDLSNVLWDGLYLGEVPSSRIEPFLQELERCLEIISSSVHDRVRTRVISDIMRASFDGFLLVLLAGGPSRGFTIQDSAAVEEDFKFLCDLFWSNGDGLPLDLIEKVSTTVKSILPLLRTDTDSLIERFKAVCLENHGSDRGKLPLPPTSGPWSPTEPNTLLRVLCYRYDEPATKFLKKTYNLPRKLT", "length": 952, "header": "tr|Q9SL80-1|Q9SL80_ARATH Isoform 1 of Gls protein (DUF810) OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SL80-1" }, "isoforms": [ { "isoform_ac": "A8MR32-1", "url": "https://www.uniprot.org/uniprotkb/A8MR32/entry", "sequence": { "sequence": "MRISEQIDSRIRRALLRIASGQLGRRVEMMVLPLELLQQLKASDFPDQEEYESWQRRNLKLLEAGLILYPCVPLSKSDKSVQQLKQIIRSGLERPLDTGKITGETQNLRSLVMSLASRQNNNGIGSETCHWADGFPLNLRIYQMLLESCFDVNDELLIVEEVDEVLELIKKTWPVLGINQMIHNVCFLWVLVNRYVSTGQVENDLLVAAHNLILEIENDAMETNDPEYSKILSSVLSLVMDWGEKRLLAYHDTFNIDNVETLETTVSLGILVAKVLGEDISSEYRRKKKHVDSGRDRVDTYIRSSLRMAFQQTKRMVEHSKKSKSRQSTNNLPALAILAEDIGHLAFNEKAIFSPILKNWHPLAAGVAAATLHSCYGTELKKFVSGITELTPDAIRVLTAADKLEKDLVQIAVQDAVDSEDGGKSVIREMPPFEAEVVIGNLVKSWIKIRVDRLKEWIDRNLQQEVWNPRSNKLGIAPSAVDVLRMVDETLEAFFLLPILLHPVLLPELTSGLDKCMQHYVSKAKSSCGSRNTFLPVLPALTRCTVGSRLHGVFKKKEKPMVASHRRKSQLGTGNDSAEILQFCCRINTLQYIRTEIESSGRKTLNRLPESEVAALDAKGKIFEQSISYCSKGIQQLSEATAYKIVFHDLSNVLWDGLYLGEVPSSRIEPFLQELERCLEIISSSVHDRVRTRVISDIMRASFDGFLLVLLAGGPSRGFTIQDSAAVEEDFKFLCDLFWSNGDGLPLDLIEKVSTTVKSILPLLRTDTDSLIERFKAVCLENHGSDRGKLPLPPTSGPWSPTEPNTLLRVLCYRYDEPATKFLKKTYNLPRKLT", "length": 834, "header": "tr|A8MR32-1|Q9SL80_ARATH Computationally mapped isoform of Gls protein (DUF810) OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SL80-1" }, "locus": { "chromosome": "2", "start_pos": 8637747, "end_pos": 8641474, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT2G20010.1", "url": "https://www.ensemblgenomes.org/id/AT2G20010.1" }, { "database": "Ensembl Peptide", "id": "AT2G20010.1", "url": "https://www.ensemblgenomes.org/id/AT2G20010.1" } ] } }, { "isoform_ac": "Q9SL80-1", "url": "https://www.uniprot.org/uniprotkb/Q9SL80/entry", "sequence": { "sequence": "MESLPSPFGDPAPNLSNSELRETAYEILVAACRSTGSRPLTYIPQSPKSDRSNGLTTASLSPSPSLHRSLTSTAASKVKKALGMKKRIGDGDGGAGESSSQPDRSKKSVTVGELVRVQMRISEQIDSRIRRALLRIASGQLGRRVEMMVLPLELLQQLKASDFPDQEEYESWQRRNLKLLEAGLILYPCVPLSKSDKSVQQLKQIIRSGLERPLDTGKITGETQNLRSLVMSLASRQNNNGIGSETCHWADGFPLNLRIYQMLLESCFDVNDELLIVEEVDEVLELIKKTWPVLGINQMIHNVCFLWVLVNRYVSTGQVENDLLVAAHNLILEIENDAMETNDPEYSKILSSVLSLVMDWGEKRLLAYHDTFNIDNVETLETTVSLGILVAKVLGEDISSEYRRKKKHVDSGRDRVDTYIRSSLRMAFQQTKRMVEHSKKSKSRQSTNNLPALAILAEDIGHLAFNEKAIFSPILKNWHPLAAGVAAATLHSCYGTELKKFVSGITELTPDAIRVLTAADKLEKDLVQIAVQDAVDSEDGGKSVIREMPPFEAEVVIGNLVKSWIKIRVDRLKEWIDRNLQQEVWNPRSNKLGIAPSAVDVLRMVDETLEAFFLLPILLHPVLLPELTSGLDKCMQHYVSKAKSSCGSRNTFLPVLPALTRCTVGSRLHGVFKKKEKPMVASHRRKSQLGTGNDSAEILQFCCRINTLQYIRTEIESSGRKTLNRLPESEVAALDAKGKIFEQSISYCSKGIQQLSEATAYKIVFHDLSNVLWDGLYLGEVPSSRIEPFLQELERCLEIISSSVHDRVRTRVISDIMRASFDGFLLVLLAGGPSRGFTIQDSAAVEEDFKFLCDLFWSNGDGLPLDLIEKVSTTVKSILPLLRTDTDSLIERFKAVCLENHGSDRGKLPLPPTSGPWSPTEPNTLLRVLCYRYDEPATKFLKKTYNLPRKLT", "length": 952, "header": "tr|Q9SL80-1|Q9SL80_ARATH Isoform 1 of Gls protein (DUF810) OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SL80-1" }, "locus": { "chromosome": "2", "start_pos": 8637663, "end_pos": 8641631, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT2G20010.2", "url": "https://www.ensemblgenomes.org/id/AT2G20010.2" }, { "database": "Ensembl Peptide", "id": "AT2G20010.2", "url": "https://www.ensemblgenomes.org/id/AT2G20010.2" } ] } } ], "glycosylation": [], "phosphorylation": [ { "start_pos": 122, "end_pos": 122, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SL80", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SL80" }, { "database": "PubMed", "id": "27419465", "url": "https://glygen.org/publication/PubMed/27419465" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ], "site_lbl": "Ser122" }, { "start_pos": 46, "end_pos": 46, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SL80", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SL80" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ], "site_lbl": "Ser46" }, { "start_pos": 52, "end_pos": 52, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SL80", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SL80" }, { "database": "PubMed", "id": "23111157", "url": 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"https://www.ebi.ac.uk/interpro/entry/pfam/PF12906", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "AT3G06330", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G06330", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "A0A1I9LSQ6", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LSQ6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A1I9LSQ6-1", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LSQ6-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "B3H497", "url": "https://www.uniprot.org/uniprotkb/B3H497", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "B3H497-1", "url": "https://www.uniprot.org/uniprotkb/B3H497-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q2V3X9", "url": "https://www.uniprot.org/uniprotkb/Q2V3X9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q2V3X9-1", "url": "https://www.uniprot.org/uniprotkb/Q2V3X9-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9SQT6", "url": "https://www.uniprot.org/uniprotkb/Q9SQT6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9SQT6-1", "url": "https://www.uniprot.org/uniprotkb/Q9SQT6-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MKMQDSAAQEPEIAIIVGDSSSSSLHSSSQVTEKSTEDVPSCSHLDLSIQIPSRSLPFGNGRNPKGSLKSTPSFKSGTTSSPRGILRNLSLKKKVISQPESERSSLLSPGLMETAKKPNATGSTTSPYWKRCLSLPSRQAAKLSPVVSTQLSAGVPGDPPNKDYSRSLSMPGRNKVIVRSISFDNHKARVSSETSADQVSSVPPEETDEEIPEEEAVCRICLDVCEEGNTLKMECSCKGDLRLVHEACAMKWFSTKGTRTCDVCRQVVQNLPVTLVRVPTPNQQNNRRGSSQQNMPSQTVSAWQEFVVLVLISTVCYFFFLEQLLIRDLNKQAIYIAAPFSLTLGLLASIFAIVLAIREYIWTYAALEFALVGMLVHIFYATVRLSATYSILFAGILGFGIAVCLNSLYLHYFAWRVRVAQNSSPV", "length": 426, "header": "tr|Q9SQT6-1|Q9SQT6_ARATH Isoform 1 of RING/U-box superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SQT6-1" }, "isoforms": [ { "isoform_ac": "A0A1I9LSQ6-1", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LSQ6/entry", "sequence": { "sequence": "METAKKPNATGSTTSPYWKRCLSLPSRQAAKLSPVVSTQLSAGVPGDPPNKDYSRSLSMPGRNKVIVRSISFDNHKARVSSETSADQVSSVPPEETDEEIPEEEAVCRICLDVCEEGNTLKMECSCKGDLRLVHEACAMKWFSTKGTRTCDVCRQVVQNLPVTLVRVPTPNQQNNRRGSSQQNMPSQTVSAWQEFVVLVLISTVCYFFFLEQLLIRDLNKQAIYIAAPFSLTLGLLASIFAIVLAIREYIWTYAALEFALVGMLVHIFYATVRLSATYSILFAGILGFGIAVCLNSLYLHYFAWRVRVAQNSSPV", "length": 315, "header": "tr|A0A1I9LSQ6-1|A0A1I9LSQ6_ARATH Computationally mapped isoform of RING/U-box superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SQT6-1" }, "locus": { "chromosome": "3", "start_pos": 1917240, "end_pos": 1919925, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G06330.4", "url": "https://www.ensemblgenomes.org/id/AT3G06330.4" }, { "database": "Ensembl Peptide", "id": "AT3G06330.4", "url": "https://www.ensemblgenomes.org/id/AT3G06330.4" } ] } }, { "isoform_ac": "B3H497-1", "url": "https://www.uniprot.org/uniprotkb/B3H497/entry", "sequence": { "sequence": "MKMQDSAAQEPEIAIIVGDSSSSSLHSSSQVTEKSTEDVPSCSHLDLSIQIPSRSLPFGNGRNPKGSLKSTPSFKSGTTSSPRGILRNLSLKKKVISQPESERSSLLSPGLMETAKKPNATGSTTSPYWKRCLSLPSRQAAKLSPVVSTQLSAGVPGDPPNKDYSRSLSMPGRNKVIVRSISFDNHKARVSSETSADQVSSVPPEETDEEIPEEEAVCRICLDVCEEGNTLKMECSCKGDLRLVHEACAMKWFSTKGTRTCDVCRQVVQNLPVTLVRVPTPNQQNNRRGSSQQNMPSQTVSAWQEFVVLVLISTVCYFFFLEQLLIRDLNKQAIYIAAPFSLTLGLLASIFAIVLGIQNHSPS", "length": 363, "header": "tr|B3H497-1|Q9SQT6_ARATH Computationally mapped isoform of RING/U-box superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SQT6-1" }, "locus": { "chromosome": "3", "start_pos": 1917203, "end_pos": 1919984, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G06330.3", "url": "https://www.ensemblgenomes.org/id/AT3G06330.3" }, { "database": "Ensembl Peptide", "id": "AT3G06330.3", "url": "https://www.ensemblgenomes.org/id/AT3G06330.3" } ] } }, { "isoform_ac": "Q2V3X9-1", "url": "https://www.uniprot.org/uniprotkb/Q2V3X9/entry", "sequence": { "sequence": "MPGRNKVIVRSISFDNHKARVSSETSADQVSSVPPEETDEEIPEEEAVCRICLDVCEEGNTLKMECSCKGDLRLVHEACAMKWFSTKGTRTCDVCRQVVQNLPVTLVRVPTPNQQNNRRGSSQQNMPSQTVSAWQEFVVLVLISTVCYFFFLEQLLIRDLNKQAIYIAAPFSLTLGLLASIFAIVLAIREYIWTYAALEFALVGMLVHIFYATVRLSATYSILFAGILGFGIAVCLNSLYLHYFAWRVRVAQNSSPV", "length": 257, "header": "tr|Q2V3X9-1|Q9SQT6_ARATH Computationally mapped isoform of RING/U-box superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=2 CANONICAL=Q9SQT6-1" }, "locus": { "chromosome": "3", "start_pos": 1917607, "end_pos": 1919925, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G06330.2", "url": "https://www.ensemblgenomes.org/id/AT3G06330.2" }, { "database": "Ensembl Peptide", "id": "AT3G06330.2", "url": "https://www.ensemblgenomes.org/id/AT3G06330.2" } ] } }, { "isoform_ac": "Q9SQT6-1", "url": "https://www.uniprot.org/uniprotkb/Q9SQT6/entry", "sequence": { "sequence": "MKMQDSAAQEPEIAIIVGDSSSSSLHSSSQVTEKSTEDVPSCSHLDLSIQIPSRSLPFGNGRNPKGSLKSTPSFKSGTTSSPRGILRNLSLKKKVISQPESERSSLLSPGLMETAKKPNATGSTTSPYWKRCLSLPSRQAAKLSPVVSTQLSAGVPGDPPNKDYSRSLSMPGRNKVIVRSISFDNHKARVSSETSADQVSSVPPEETDEEIPEEEAVCRICLDVCEEGNTLKMECSCKGDLRLVHEACAMKWFSTKGTRTCDVCRQVVQNLPVTLVRVPTPNQQNNRRGSSQQNMPSQTVSAWQEFVVLVLISTVCYFFFLEQLLIRDLNKQAIYIAAPFSLTLGLLASIFAIVLAIREYIWTYAALEFALVGMLVHIFYATVRLSATYSILFAGILGFGIAVCLNSLYLHYFAWRVRVAQNSSPV", "length": 426, "header": "tr|Q9SQT6-1|Q9SQT6_ARATH Isoform 1 of RING/U-box superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SQT6-1" }, "locus": { "chromosome": "3", "start_pos": 1917131, "end_pos": 1919959, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G06330.1", "url": "https://www.ensemblgenomes.org/id/AT3G06330.1" }, { "database": "Ensembl Peptide", "id": "AT3G06330.1", "url": "https://www.ensemblgenomes.org/id/AT3G06330.1" } ] } } ], "glycosylation": [], "phosphorylation": [ { "start_pos": 108, "end_pos": 108, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SQT6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SQT6" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ], "site_lbl": "Ser108" }, { "start_pos": 121, "end_pos": 121, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Thr", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SQT6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SQT6" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ], "site_lbl": "Thr121" }, { "start_pos": 134, "end_pos": 134, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SQT6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SQT6" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "28011693", "url": "https://glygen.org/publication/PubMed/28011693" } ], "site_lbl": "Ser134" }, { "start_pos": 169, "end_pos": 169, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SQT6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SQT6" }, { "database": "PubMed", "id": "28011693", "url": "https://glygen.org/publication/PubMed/28011693" } ], "site_lbl": "Ser169" }, { "start_pos": 182, "end_pos": 182, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SQT6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SQT6" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "28011693", "url": "https://glygen.org/publication/PubMed/28011693" } ], "site_lbl": "Ser182" }, { "start_pos": 423, "end_pos": 423, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SQT6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SQT6" }, { "database": "PubMed", "id": "28011693", "url": "https://glygen.org/publication/PubMed/28011693" } ], "site_lbl": "Ser423" }, { "start_pos": 424, "end_pos": 424, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SQT6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SQT6" }, { "database": "PubMed", "id": "28011693", "url": "https://glygen.org/publication/PubMed/28011693" } ], "site_lbl": "Ser424" }, { "start_pos": 67, "end_pos": 67, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SQT6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SQT6" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ], "site_lbl": "Ser67" }, { "start_pos": 71, "end_pos": 71, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Thr", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SQT6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SQT6" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ], "site_lbl": "Thr71" } ], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "B3H497", "url": "https://www.uniprot.org/uniprotkb/B3H497" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "A large-scale protein phosphorylation analysis reveals novel phosphorylation motifs and phosphoregulatory networks in Arabidopsis.", "journal": "Journal of proteomics", "date": "2013-01-14", "authors": "Wang Xu, Bian Yangyang, Cheng Kai, Gu Li-Fei, Ye Mingliang, Zou Hanfa, Sun Samuel Sai-Ming, He Jun-Xian", "evidence": [ { "database": "iPTMnet", "id": "Q9SQT6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SQT6" } ], "reference": [ { "type": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" } ] }, { "title": "Quantitative phosphoproteomics of the ataxia telangiectasia-mutated (ATM) and ataxia telangiectasia-mutated and rad3-related (ATR) dependent DNA damage response in Arabidopsis thaliana.", "journal": "Molecular & cellular proteomics : MCP", "date": "2015-03", "authors": "Roitinger Elisabeth, Hofer Manuel, K\u00f6cher Thomas, Pichler Peter, Novatchkova Maria, Yang Jianhua, Schl\u00f6gelhofer Peter, Mechtler Karl", "evidence": [ { "database": "iPTMnet", "id": "Q9SQT6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SQT6" } ], "reference": [ { "type": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "B3H497", "url": "https://www.uniprot.org/uniprotkb/B3H497" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] }, { "title": "Protein Phosphatase 2Cs and Microtubule-Associated Stress Protein 1 Control Microtubule Stability, Plant Growth, and Drought Response.", "journal": "The Plant cell", "date": "2017-01", "authors": "Bhaskara Govinal Badiger, Wen Tuan-Nan, Nguyen Thao Thi, Verslues Paul E", "evidence": [ { "database": "iPTMnet", "id": "Q9SQT6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SQT6" } ], "reference": [ { "type": "PubMed", "id": "28011693", "url": "https://glygen.org/publication/PubMed/28011693" } ] } ], "pathway": [ { "id": "ath:AT3G06330", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G06330", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "zinc ion binding", "id": "GO:0008270", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008270", "evidence": [ { "database": "UniProtKB", "id": "Q9SQT6", "url": "https://www.uniprot.org/uniprotkb/Q9SQT6" } ], "pmid": "" }, { "name": "ubiquitin-protein transferase activity", "id": "GO:0004842", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004842", "evidence": [ { "database": "UniProtKB", "id": "Q9SQT6", "url": "https://www.uniprot.org/uniprotkb/Q9SQT6" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "Q9SQT6", "url": "https://www.uniprot.org/uniprotkb/Q9SQT6" } ], "pmid": "" }, { "name": "chloroplast", "id": "GO:0009507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009507", "evidence": [ { "database": "UniProtKB", "id": "Q9SQT6", "url": "https://www.uniprot.org/uniprotkb/Q9SQT6" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 119, "end_pos": 121, "annotation": "n_glycosylation_sequon" }, { "start_pos": 422, "end_pos": 424, "annotation": "n_glycosylation_sequon" }, { "start_pos": 88, "end_pos": 90, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "Q9SQT6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SQT6" }, { "id": "PS51292", "database": "PROSITE", "url": "https://prosite.expasy.org/PS51292" } ], "ann_type": "Domain_Extent_Annotation", 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"Organism-specific" ] }, { "id": "B3H5I1", "url": "https://www.uniprot.org/uniprotkb/B3H5I1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "B3H5I1-1", "url": "https://www.uniprot.org/uniprotkb/B3H5I1-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9XIH1", "url": "https://www.uniprot.org/uniprotkb/Q9XIH1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9XIH1-1", "url": "https://www.uniprot.org/uniprotkb/Q9XIH1-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MSDDEDLDLSLRLYTQPKKTVNEKNGLVPQRQEEQGEVMQLLTSDPPQNTQPSPPQPNDMTSFANGTNHVIVPTQALEQAVPPPNVSVRTPLPYQPSEEVLPPPQLNQVATVALATPRRGRPPGGQARRNSKRPVAGVERNVGDREIVPPYPWATKKPGKIQSFRDLSSNNINVISGQVHCKTCDRTDTVEYNLEEKFSELYGYIKVNKEEMRHRAPGSWSTPKLIPCRTCKSEMKPVMSERKEEINWLFLLLGQMLGCCTLDQLRYFCQLNSKHRTGSKDRVVYITYLSLCKQLDPEGPFNL", "length": 303, "header": "tr|Q9XIH1-1|Q9XIH1_ARATH Isoform 1 of DUF7086 domain-containing protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9XIH1-1" }, "isoforms": [ { "isoform_ac": "B3H5I1-1", "url": "https://www.uniprot.org/uniprotkb/B3H5I1/entry", "sequence": { "sequence": "MSDDEDLDLSLRLYTQPKKTVNEKNGLVPQRQEEQGEVMQLLTSDPPQNTQPSPPQPNDMTSFANGTNHVIVPTQALEQAVPPPNVSVRTPLPYQPSEEVLPPPQLNQVATVALATPRRGRPPGGQARRNSKRPVAGVERNVGDREIVPPYPWATKKPGKIQSFRDLSSNNINVISGQVHCKTCDRTDTVEYNLEEKFSELYGYIKVNKEEMRHRAPGSWSTPKLIPCRTCKSEMKPVMSERKEEINWLFLLLGQMLGCCTLDQLSSTPKDHLTCDL", "length": 277, "header": "tr|B3H5I1-1|Q9XIH1_ARATH Computationally mapped isoform of DUF7086 domain-containing protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9XIH1-1" }, "locus": { "chromosome": "2", "start_pos": 7020486, "end_pos": 7021601, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT2G16190.2", "url": "https://www.ensemblgenomes.org/id/AT2G16190.2" }, { "database": "Ensembl Peptide", "id": "AT2G16190.2", "url": "https://www.ensemblgenomes.org/id/AT2G16190.2" } ] } }, { "isoform_ac": "Q9XIH1-1", "url": 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Classification" ] }, { "id": "PTHR46929", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR46929", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR46929:SF28", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR46929:SF28", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF12776", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF12776", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "AT2G24960", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT2G24960", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "B3H6H6", "url": "https://www.uniprot.org/uniprotkb/B3H6H6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "B3H6H6-1", "url": "https://www.uniprot.org/uniprotkb/B3H6H6-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9SK37", "url": 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"MSNQTTCNDRTRTYWTPTMERFFIDLMLEHLHRGNRTGHTFNKQAWNEMLTVFNSKFGSQYDKDVLKSRYTNLWKQYNDVKCLLDHGGFVWDQTHQTVIGDDSLWSLYLKAHPEARVYKTKPVLNFSDLCLIYGYTVADGRYSMSSHDLEIEDEINGESVVLSGKESSKTEWTLEMDQYFVEIMVDQIGRGNKTGNAFSKQAWIDMLVLFNARFSGQYGKRVLRHRYNKLLKYYKDMEAILKEDGFSWDETRLMISADDAVWDSYIKDHPLARTYRMKSLPSYNDLDTIFACQAEQGTDHRDDGSAAQTSETKASQEQNSDRTRIFWTPPMDYHLIDLLVEQVNNGNRVGQTFITSAWNEMVTAFNAKFGSQHNKDVLKNRYKHLRRLYNDIKFLLEQNGFSWDARRDMVIADDDIWNTYIQACHILFLFKISVICLCLQMKHVQAHPEARSYRVKTIPSYPNLCFIFGKETSDGRYTRLAQAFDPSPAETVRMNESGSTDGFKDTRSFQKVVYTSNEKNDYPCSNIGPPCIEWTRVMDHCLIDLMLEQVSRGNKIGETFTEQAWADMAESFNAKFGLQTDMFMLENRYILLMKERDDINNILNLDGFTWDVEKQTIVAEDEYWEAYIKEHPDATIYKGKTLDSYGNLCKLNEHLSQESFNCENLMIELENYGNEMEIVDDFSSPHKQQNKRPNPITPPLGIVVCKAQKTGVETRKPLCETEGDDDDCTKPMPQIEIYSRIGNALDALQALPDMDDELLLDACDLLEDERKAKTFLALDVSLRRKWLVRKLRPSANV", "length": 797, "header": "tr|Q9SK37-1|Q9SK37_ARATH Isoform 1 of Myb/SANT-like DNA-binding domain protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SK37-1" }, "isoforms": [ { "isoform_ac": "B3H6H6-1", "url": "https://www.uniprot.org/uniprotkb/B3H6H6/entry", "sequence": { "sequence": "MSNQTTCNDRTRTYWTPTMERFFIDLMLEHLHRGNRTGHTFNKQAWNEMLTVFNSKFGSQYDKDVLKSRYTNLWKQYNDVKCLLDHGGFVWDQTHQTVIGDDSLWSLYLKAHPEARVYKTKPVLNFSDLCLIYGYTVADGRYSMSSHDLEIEDEINGESVVLSGKESSKTEWTLEMDQYFVEIMVDQIGRGNKTGNAFSKQAWIDMLVLFNARFSGQYGKRVLRHRYNKLLKYYKDMEAILKEDGFSWDETRLMISADDAVWDSYIKDHPLARTYRMKSLPSYNDLDTIFACQAEQGTDHRDDGSAAQTSETKASQEQNSDRTRIFWTPPMDYHLIDLLVEQVNNGNRVGQTFITSAWNEMVTAFNAKFGSQHNKDVLKNRYKHLRRLYNDIKFLLEQNGFSWDARRDMVIADDDIWNTYIQAHPEARSYRVKTIPSYPNLCFIFGKETSDGRYTRLAQAFDPSPAETVRMNESGSTDGFKDTRSFQKVVYTSNEKNDYPCSNIGPPCIEWTRVMDHCLIDLMLEQVSRGNKIGETFTEQAWADMAESFNAKFGLQTDMFMLENRYILLMKERDDINNILNLDGFTWDVEKQTIVAEDEYWEAYIKEHPDATIYKGKTLDSYGNLCKLNEHLSQESFNCENLMIELENYGNEMEIVDDFSSPHKQQNKRPNPITPPLGIVVCKAQKTGVETRKPLCETEGDDDDCTKPMPQIEIYSRIGNALDALQALPDMDDELLLDACDLLEDERKAKTFLALDVSLRRKWLVRKLRPSANV", "length": 774, "header": "tr|B3H6H6-1|Q9SK37_ARATH Computationally mapped isoform of Myb/SANT-like DNA-binding domain protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SK37-1" }, "locus": { "chromosome": "2", "start_pos": 10617116, "end_pos": 10620034, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT2G24960.2", "url": "https://www.ensemblgenomes.org/id/AT2G24960.2" }, { "database": "Ensembl Peptide", "id": "AT2G24960.2", "url": "https://www.ensemblgenomes.org/id/AT2G24960.2" } ] } }, { "isoform_ac": "Q9SK37-1", "url": "https://www.uniprot.org/uniprotkb/Q9SK37/entry", "sequence": { "sequence": "MSNQTTCNDRTRTYWTPTMERFFIDLMLEHLHRGNRTGHTFNKQAWNEMLTVFNSKFGSQYDKDVLKSRYTNLWKQYNDVKCLLDHGGFVWDQTHQTVIGDDSLWSLYLKAHPEARVYKTKPVLNFSDLCLIYGYTVADGRYSMSSHDLEIEDEINGESVVLSGKESSKTEWTLEMDQYFVEIMVDQIGRGNKTGNAFSKQAWIDMLVLFNARFSGQYGKRVLRHRYNKLLKYYKDMEAILKEDGFSWDETRLMISADDAVWDSYIKDHPLARTYRMKSLPSYNDLDTIFACQAEQGTDHRDDGSAAQTSETKASQEQNSDRTRIFWTPPMDYHLIDLLVEQVNNGNRVGQTFITSAWNEMVTAFNAKFGSQHNKDVLKNRYKHLRRLYNDIKFLLEQNGFSWDARRDMVIADDDIWNTYIQACHILFLFKISVICLCLQMKHVQAHPEARSYRVKTIPSYPNLCFIFGKETSDGRYTRLAQAFDPSPAETVRMNESGSTDGFKDTRSFQKVVYTSNEKNDYPCSNIGPPCIEWTRVMDHCLIDLMLEQVSRGNKIGETFTEQAWADMAESFNAKFGLQTDMFMLENRYILLMKERDDINNILNLDGFTWDVEKQTIVAEDEYWEAYIKEHPDATIYKGKTLDSYGNLCKLNEHLSQESFNCENLMIELENYGNEMEIVDDFSSPHKQQNKRPNPITPPLGIVVCKAQKTGVETRKPLCETEGDDDDCTKPMPQIEIYSRIGNALDALQALPDMDDELLLDACDLLEDERKAKTFLALDVSLRRKWLVRKLRPSANV", "length": 797, "header": "tr|Q9SK37-1|Q9SK37_ARATH Isoform 1 of Myb/SANT-like DNA-binding domain protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SK37-1" }, "locus": { "chromosome": "2", "start_pos": 10617263, "end_pos": 10620034, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT2G24960.1", "url": "https://www.ensemblgenomes.org/id/AT2G24960.1" }, { "database": "Ensembl Peptide", "id": "AT2G24960.1", "url": "https://www.ensemblgenomes.org/id/AT2G24960.1" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "other", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 697, "start_aa": "Thr", "end_pos": 697, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr697", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ], "filter_code": "000000000000000010000.00000000001000.0.01000" } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "1999", "authors": "Lin X, Kaul S, Rounsley S, Shea T P, Benito M I, Town C D, Fujii C Y, Mason T, Bowman C L, Barnstead M, Feldblyum T V, Buell C R, Ketchum K A, Lee J, Ronning C M, Koo H L, Moffat K S, Cronin L A, Shen M, Pai G, Van Aken S, Umayam L, Tallon L J, Gill J E, Adams M D, Carrera A J, Creasy T H, Goodman H M, Somerville C R, Copenhaver G P, Preuss D, Nierman W C, White O, Eisen J A, Salzberg S L, Fraser C M, Venter J C", "evidence": [ { "database": "UniProtKB", "id": "B3H6H6", "url": "https://www.uniprot.org/uniprotkb/B3H6H6" } ], "reference": [ { "type": "PubMed", "id": "10617197", "url": "https://glygen.org/publication/PubMed/10617197" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "B3H6H6", "url": "https://www.uniprot.org/uniprotkb/B3H6H6" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT2G24960", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT2G24960", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "DNA binding", "id": "GO:0003677", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003677", "evidence": [ { "database": "UniProtKB", "id": "Q9SK37", "url": "https://www.uniprot.org/uniprotkb/Q9SK37" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q9SK37", "url": "https://www.uniprot.org/uniprotkb/Q9SK37" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 125, "end_pos": 127, "annotation": "n_glycosylation_sequon" }, { "start_pos": 192, "end_pos": 194, "annotation": "n_glycosylation_sequon" }, { "start_pos": 35, "end_pos": 37, "annotation": "n_glycosylation_sequon" }, { "start_pos": 3, "end_pos": 5, "annotation": "n_glycosylation_sequon" }, { "start_pos": 495, "end_pos": 497, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "Q9SK37", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SK37" }, { "id": "PF12776", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF12776" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Myb/SANT-like", "eco_id": "ECO_0000259", "start_pos": 14, "end_pos": 108, "start_aa": "Tyr", "end_aa": "Tyr", "glycosite_overlap": [] } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [ 697 ], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 125, "end_pos": 127 }, { "start_pos": 192, "end_pos": 194 }, { "start_pos": 35, "end_pos": 37 }, { "start_pos": 3, "end_pos": 5 }, { "start_pos": 495, "end_pos": 497 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 1 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { 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}, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 1 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 1 }, { "field": "exact_o_linked_sites", "count": 1 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", 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"MVLRFCCHLLTYSVSLLPPITMFFDGYHYHGTTFEQSYRCYPASFIDKPQLESGDKIIMPPSALDRLASLHIDYPMLFELRNAGIERVTHCGVLEFIAEEGMIYMPYWMMQNLLLQEGDIVRVRNVTLPKGTYVKLQPHTTDFLDISNPKAILETALRNYSCLTSGDSIMVPYNNKKYFIDIVETKPANAISIIETDCEVDFAPPLDYKEPERPTAPSAAKGPAKAEEVVDEPEPKFNPFTGSGRRLDGRPLAYEPAPASSSKGKQPVVANGNGQSSVASSSEKATRAQGKLVFGANGNRAPKEAAPKVGAAKETKKEEQEKKDEPKFQAFSGKKYSLRG", "length": 340, "header": "sp|Q9SJV0-1|UFD1B_ARATH Isoform 1 of Ubiquitin fusion degradation protein 1 B OS=Arabidopsis thaliana OX=3702 GN=UFD1B PE=1 SV=3 CANONICAL=Q9SJV0-1" }, "isoforms": [ { "isoform_ac": "Q9SJV0-1", "url": "https://www.uniprot.org/uniprotkb/Q9SJV0/entry#Q9SJV0-1", "sequence": { "sequence": "MVLRFCCHLLTYSVSLLPPITMFFDGYHYHGTTFEQSYRCYPASFIDKPQLESGDKIIMPPSALDRLASLHIDYPMLFELRNAGIERVTHCGVLEFIAEEGMIYMPYWMMQNLLLQEGDIVRVRNVTLPKGTYVKLQPHTTDFLDISNPKAILETALRNYSCLTSGDSIMVPYNNKKYFIDIVETKPANAISIIETDCEVDFAPPLDYKEPERPTAPSAAKGPAKAEEVVDEPEPKFNPFTGSGRRLDGRPLAYEPAPASSSKGKQPVVANGNGQSSVASSSEKATRAQGKLVFGANGNRAPKEAAPKVGAAKETKKEEQEKKDEPKFQAFSGKKYSLRG", "length": 340, "header": "sp|Q9SJV0-1|UFD1B_ARATH Isoform 1 of Ubiquitin fusion degradation protein 1 B OS=Arabidopsis thaliana OX=3702 GN=UFD1B PE=1 SV=3 CANONICAL=Q9SJV0-1" }, "locus": { "chromosome": "2", "start_pos": 9107546, "end_pos": 9110275, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT2G21270.1", "url": "https://www.ensemblgenomes.org/id/AT2G21270.1" }, { "database": "Ensembl Peptide", "id": "AT2G21270.1", "url": "https://www.ensemblgenomes.org/id/AT2G21270.1" } ] } }, { "isoform_ac": "Q9SJV0-2", "url": "https://www.uniprot.org/uniprotkb/Q9SJV0/entry#Q9SJV0-2", "sequence": { "sequence": "MFFDGYHYHGTTFEQSYRCYPASFIDKPQLESGDKIIMPPSALDRLASLHIDYPMLFELRNAGIERVTHCGVLEFIAEEGMIYMPYWMMQNLLLQEGDIVRVRNVTLPKGTYVKLQPHTTDFLDISNPKAILETALRNYSCLTSGDSIMVPYNNKKYFIDIVETKPANAISIIETDCEVDFAPPLDYKEPERPTAPSAAKGPAKAEEVVDEPEPKFNPFTGSGRRLDGRPLAYEPAPASSSKGKQPVVANGNGQSSVASSSEKATRAQGKLVFGANGNRAPKEAAPKVGAAKETKKEEQEKKDEPKFQAFSGKKYSLRG", "length": 319, "header": "sp|Q9SJV0-2|UFD1B_ARATH Isoform 2 of Ubiquitin fusion degradation protein 1 B OS=Arabidopsis thaliana OX=3702 GN=UFD1B PE=1 SV=3 CANONICAL=Q9SJV0-1" }, "locus": {} } ], "glycosylation": [], "phosphorylation": [ { "start_pos": 147, "end_pos": 147, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SJV0", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SJV0" }, { "database": "PubMed", "id": "18463617", "url": "https://glygen.org/publication/PubMed/18463617" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ], "site_lbl": "Ser147" }, { "start_pos": 243, "end_pos": 243, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SJV0", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SJV0" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" }, { "database": "PubMed", "id": "23660473", "url": "https://glygen.org/publication/PubMed/23660473" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ], "site_lbl": "Ser243" }, { "start_pos": 261, "end_pos": 261, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "Phosphoserine; by PI4KG4", "evidence": [ { "database": "UniProtKB", "id": "Q9SJV0", "url": "https://www.uniprot.org/uniprotkb/Q9SJV0" } ], "site_lbl": "Ser261" }, { "start_pos": 27, "end_pos": 27, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Tyr", "comment": "Phosphotyrosine; by PI4KG4", "evidence": [ { "database": "UniProtKB", "id": "Q9SJV0", "url": "https://www.uniprot.org/uniprotkb/Q9SJV0" } ], "site_lbl": "Tyr27" }, { "start_pos": 315, "end_pos": 315, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Thr", "comment": "Phosphothreonine; by PI4KG4", "evidence": [ { "database": "UniProtKB", "id": "Q9SJV0", "url": "https://www.uniprot.org/uniprotkb/Q9SJV0" } ], "site_lbl": "Thr315" }, { "start_pos": 32, "end_pos": 32, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Thr", "comment": "Phosphothreonine; by PI4KG4", "evidence": [ { "database": "UniProtKB", "id": "Q9SJV0", "url": "https://www.uniprot.org/uniprotkb/Q9SJV0" } ], "site_lbl": "Thr32" }, { "start_pos": 332, "end_pos": 332, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "Phosphoserine; by PI4KG4", "evidence": [ { "database": "UniProtKB", "id": "Q9SJV0", "url": "https://www.uniprot.org/uniprotkb/Q9SJV0" }, { "database": "iPTMnet", "id": "Q9SJV0", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SJV0" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ], "site_lbl": "Ser332" }, { "start_pos": 33, "end_pos": 33, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Thr", "comment": "Phosphothreonine; by PI4KG4", "evidence": [ { "database": "UniProtKB", "id": "Q9SJV0", "url": "https://www.uniprot.org/uniprotkb/Q9SJV0" } ], "site_lbl": "Thr33" } ], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "1999", "authors": "Lin X, Kaul S, Rounsley S, Shea T P, Benito M I, Town C D, Fujii C Y, Mason T, Bowman C L, Barnstead M, Feldblyum T V, Buell C R, Ketchum K A, Lee J, Ronning C M, Koo H L, Moffat K S, Cronin L A, Shen M, Pai G, Van Aken S, Umayam L, Tallon L J, Gill J E, Adams M D, Carrera A J, Creasy T H, Goodman H M, Somerville C R, Copenhaver G P, Preuss D, Nierman W C, White O, Eisen J A, Salzberg S L, Fraser C M, Venter J C", "evidence": [ { "database": "UniProtKB", "id": "Q9SJV0", "url": "https://www.uniprot.org/uniprotkb/Q9SJV0" } ], "reference": [ { "type": "PubMed", "id": "10617197", "url": "https://glygen.org/publication/PubMed/10617197" } ] }, { "title": "Characterization of a new family of protein kinases from Arabidopsis containing phosphoinositide 3/4-kinase and ubiquitin-like domains.", "journal": "Biochem. J.", "date": "2008", "authors": "Galv\u00e3o Rafaelo M, Kota Uma, Soderblom Erik J, Goshe Michael B, Boss Wendy F", "evidence": [ { "database": "UniProtKB", "id": "Q9SJV0", "url": "https://www.uniprot.org/uniprotkb/Q9SJV0" } ], "reference": [ { "type": "PubMed", "id": "17880284", "url": "https://glygen.org/publication/PubMed/17880284" } ] }, { "title": "Analysis of multiple occurrences of alternative splicing events in Arabidopsis thaliana using novel sequenced full-length cDNAs.", "journal": "DNA Res.", "date": "2009", "authors": "Iida Kei, Fukami-Kobayashi Kaoru, Toyoda Atsushi, Sakaki Yoshiyuki, Kobayashi Masatomo, Seki Motoaki, Shinozaki Kazuo", "evidence": [ { "database": "UniProtKB", "id": "Q9SJV0", "url": "https://www.uniprot.org/uniprotkb/Q9SJV0" } ], "reference": [ { "type": "PubMed", "id": "19423640", "url": "https://glygen.org/publication/PubMed/19423640" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9SJV0", "url": "https://www.uniprot.org/uniprotkb/Q9SJV0" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] }, { "title": "The CDC48 complex mediates ubiquitin-dependent degradation of intra-chloroplast proteins in plants.", "journal": "Cell reports", "date": "2022-04-12", "authors": "Li Jialong, Yuan Jiarui, Li Yuhong, Sun Huilun, Ma Tingting, Huai Junling, Yang Wenqiang, Zhang Wenhao, Lin Rongcheng", "evidence": [ { "database": "UniProtKB", "id": "Q9SJV0", "url": "https://www.uniprot.org/uniprotkb/Q9SJV0" } ], "reference": [ { "type": "PubMed", "id": "35417702", "url": "https://glygen.org/publication/PubMed/35417702" } ] } ], "pathway": [ { "id": "ath:AT2G21270", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT2G21270", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 3, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q9SJV0", "url": "https://www.uniprot.org/uniprotkb/Q9SJV0" } ], "pmid": "" }, { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "Q9SJV0", "url": "https://www.uniprot.org/uniprotkb/Q9SJV0" } ], "pmid": "" }, { "name": "chloroplast outer membrane", "id": "GO:0009707", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009707", "evidence": [ { "database": "UniProtKB", "id": "Q9SJV0", "url": "https://www.uniprot.org/uniprotkb/Q9SJV0" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 4, "go_terms": [ { "name": "proteasomal protein catabolic process", 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"https://www.uniprot.org/uniprotkb/Q1PF83" } ], "reference": [ { "type": "PubMed", "id": "10617197", "url": "https://glygen.org/publication/PubMed/10617197" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q1PF83", "url": "https://www.uniprot.org/uniprotkb/Q1PF83" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT2G10930", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT2G10930", "resource": "KEGG Pathway" }, { "id": "ath:AT2G10931", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT2G10931", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": 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192, "header": "tr|Q3EBM1-1|Q9SJR4_ARATH Computationally mapped isoform of Transcriptional activator (DUF662) OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SJR4-1" }, "locus": { "chromosome": "2", "start_pos": 15278517, "end_pos": 15280703, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT2G36410.2", "url": "https://www.ensemblgenomes.org/id/AT2G36410.2" }, { "database": "Ensembl Peptide", "id": "AT2G36410.2", "url": "https://www.ensemblgenomes.org/id/AT2G36410.2" } ] } }, { "isoform_ac": "Q9SJR4-1", "url": "https://www.uniprot.org/uniprotkb/Q9SJR4/entry", "sequence": { "sequence": "MTQSQTNDGAGAGAVTTVESVPPQPQSQPQPQPQQQSNEMVLHTGSLSFSSHMSREDEEMTRSALSAFRAKEDEIEKRRMEVRERIQAQLGRVEQETKRLSTIREELESMADPMRKEVSVVRKKIDSVNKELKPLGSTVQKKEREYKEALDTFNEKNREKVQLITKLMEMEQLVGESEKLRMIKLEELSKSIETV", "length": 195, "header": "tr|Q9SJR4-1|Q9SJR4_ARATH Isoform 1 of Transcriptional activator (DUF662) OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=2 CANONICAL=Q9SJR4-1" }, "locus": { "chromosome": "2", "start_pos": 15278769, "end_pos": 15280726, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT2G36410.1", "url": "https://www.ensemblgenomes.org/id/AT2G36410.1" }, { "database": "Ensembl Peptide", "id": "AT2G36410.1", "url": "https://www.ensemblgenomes.org/id/AT2G36410.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "1999", "authors": "Lin X, Kaul S, Rounsley S, Shea T P, Benito M I, Town C D, Fujii C Y, Mason T, Bowman C L, Barnstead M, Feldblyum T V, Buell C R, Ketchum K A, Lee J, Ronning C M, Koo H L, Moffat K S, Cronin L A, Shen M, Pai G, Van Aken S, Umayam L, Tallon L J, Gill J E, Adams M D, Carrera A J, Creasy T H, Goodman H M, Somerville C R, Copenhaver G P, Preuss D, Nierman W C, White O, Eisen J A, Salzberg S L, Fraser C M, Venter J C", "evidence": [ { "database": "UniProtKB", "id": "Q2V422", "url": "https://www.uniprot.org/uniprotkb/Q2V422" } ], "reference": [ { "type": "PubMed", "id": "10617197", "url": "https://glygen.org/publication/PubMed/10617197" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q2V422", "url": "https://www.uniprot.org/uniprotkb/Q2V422" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT2G36410", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT2G36410", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "sequence-specific DNA 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"https://www.ncbi.nlm.nih.gov/protein/NP_190775" }, "gene_names": [], "protein_names": [ { "name": "RNA/RNP complex-1-interacting phosphatase", "type": "synonym", "evidence": [ { "id": "NP_190775", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_190775" }, { "id": "Q9SUZ7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SUZ7/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9SUZ7", "url": "https://www.uniprot.org/uniprotkb/Q9SUZ7" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9SUZ7", "locus": {} } ], "crossref": [ { "id": "AT3G52070", "url": 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"Organism-specific" ] }, { "id": "Q3EAL3", "url": "https://www.uniprot.org/uniprotkb/Q3EAL3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q3EAL3-1", "url": "https://www.uniprot.org/uniprotkb/Q3EAL3-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9SUZ7", "url": "https://www.uniprot.org/uniprotkb/Q9SUZ7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9SUZ7-1", "url": "https://www.uniprot.org/uniprotkb/Q9SUZ7-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MAALSTTFYYHPLCTNHRTKRQASSRHGVRSMRVMSCRKQKLPEENEGVIQRTLRRMISEAGKIGKNLKPEKKKGDVKDLMLMSLSFAVYVYISQLLVCAYFSWQHLSFPKSSW", "length": 114, "header": "tr|Q9SUZ7-1|Q9SUZ7_ARATH Isoform 1 of RNA/RNP complex-1-interacting phosphatase OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SUZ7-1" }, "isoforms": [ { "isoform_ac": "Q3EAL3-1", "url": "https://www.uniprot.org/uniprotkb/Q3EAL3/entry", "sequence": { "sequence": "MAALSTTFYYHPLCTNHRTKRQASSRHGVRSMRVMSCRKQKLPEENEGVIQRTLRRMISEAGKIGKNLKPEKKKGDVKDLMLMSLSFAVYVYISQLLVCAYFSWQHLSFPKSS", "length": 113, "header": "tr|Q3EAL3-1|Q9SUZ7_ARATH Computationally mapped isoform of RNA/RNP complex-1-interacting phosphatase OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SUZ7-1" }, "locus": { "chromosome": "3", "start_pos": 19312753, "end_pos": 19313466, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G52070.2", "url": "https://www.ensemblgenomes.org/id/AT3G52070.2" }, { "database": "Ensembl Peptide", "id": "AT3G52070.2", "url": "https://www.ensemblgenomes.org/id/AT3G52070.2" } ] } }, { "isoform_ac": "Q9SUZ7-1", "url": "https://www.uniprot.org/uniprotkb/Q9SUZ7/entry", "sequence": { "sequence": "MAALSTTFYYHPLCTNHRTKRQASSRHGVRSMRVMSCRKQKLPEENEGVIQRTLRRMISEAGKIGKNLKPEKKKGDVKDLMLMSLSFAVYVYISQLLVCAYFSWQHLSFPKSSW", "length": 114, "header": "tr|Q9SUZ7-1|Q9SUZ7_ARATH Isoform 1 of RNA/RNP complex-1-interacting phosphatase OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SUZ7-1" }, "locus": { "chromosome": "3", "start_pos": 19312718, "end_pos": 19313224, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G52070.1", "url": "https://www.ensemblgenomes.org/id/AT3G52070.1" }, { "database": "Ensembl Peptide", "id": "AT3G52070.1", "url": "https://www.ensemblgenomes.org/id/AT3G52070.1" } ] } } ], "glycosylation": [], "phosphorylation": [ { "start_pos": 59, "end_pos": 59, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SUZ7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SUZ7" }, { "database": "PubMed", "id": "19376835", "url": "https://glygen.org/publication/PubMed/19376835" } ], "site_lbl": "Ser59" } ], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q3EAL3", "url": "https://www.uniprot.org/uniprotkb/Q3EAL3" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Large-scale Arabidopsis phosphoproteome profiling reveals novel chloroplast kinase substrates and phosphorylation networks.", "journal": "Plant physiology", "date": "2009-06", "authors": "Reiland Sonja, Messerli Ga\u00eblle, Baerenfaller Katja, Gerrits Bertran, Endler Anne, Grossmann Jonas, Gruissem Wilhelm, Baginsky Sacha", "evidence": [ { "database": "iPTMnet", "id": "Q9SUZ7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SUZ7" } ], "reference": [ { "type": "PubMed", "id": "19376835", "url": "https://glygen.org/publication/PubMed/19376835" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q3EAL3", "url": "https://www.uniprot.org/uniprotkb/Q3EAL3" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G52070", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G52070", 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[3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9SHT7", "locus": {} } ], "crossref": [ { "id": "AT2G05370", "url": "https://bar.utoronto.ca/thalemine/portal.do?externalids=AT2G05370", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "815085", "url": "https://www.ncbi.nlm.nih.gov/gene/815085", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR057297", "url": "https://www.ebi.ac.uk/interpro/entry/IPR057297", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR057298", "url": "https://www.ebi.ac.uk/interpro/entry/IPR057298", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT2G05370", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT2G05370", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "DNDPWIR", "url": "https://omabrowser.org/oma/group/DNDPWIR/", "database": "OMA", "categories": [ "Protein 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"Protein" ] } ], "sequence": { "sequence": "MKNLVVSQVTISGFGESTKTKELTDYLENKVGLLVWRCRLKTSWTPHGSYPNFEIIDTSNIPKFDCYERVVPHAFVHCDAHKSLMDAAEQSKLILGGQPLKFSLSSENPYTLNPYKLTGVSLEIGTLASSPRVWYRTADDDIYETSAVDLLDDNDPWIRTTDFTQSGAIRRCLGYRVFISPRDHNKWTKVLDYLKTQRVNTEHKDVMDFWY", "length": 211, "header": "tr|Q9SHT7-1|Q9SHT7_ARATH Isoform 1 of RNA-dependent RNA polymerase-like protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9SHT7-1" }, "isoforms": [ { "isoform_ac": "Q58G28-1", "url": "https://www.uniprot.org/uniprotkb/Q58G28/entry", "sequence": { "sequence": "MESEGNMKNLVVSQVTISGFGESTKTKELTDYLENKVGLLVWRCRLKTSWTPHGSYPNFEIIDTSNIPKFDCYERVVPHAFVHCDAHKSLMDAAEQSKLILGGQPLKFSLSSENPYTLNPYKLTGVSLEIGTVSQDDFFLFLI", "length": 143, "header": "tr|Q58G28-1|Q9SHT7_ARATH Computationally mapped isoform of RNA-dependent RNA polymerase-like protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9SHT7-1" }, "locus": { "chromosome": "2", "start_pos": 1960415, "end_pos": 1961840, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT2G05370.2", "url": "https://www.ensemblgenomes.org/id/AT2G05370.2" }, { "database": "Ensembl Peptide", "id": "AT2G05370.2", "url": "https://www.ensemblgenomes.org/id/AT2G05370.2" } ] } }, { "isoform_ac": "Q9SHT7-1", "url": "https://www.uniprot.org/uniprotkb/Q9SHT7/entry", "sequence": { "sequence": "MKNLVVSQVTISGFGESTKTKELTDYLENKVGLLVWRCRLKTSWTPHGSYPNFEIIDTSNIPKFDCYERVVPHAFVHCDAHKSLMDAAEQSKLILGGQPLKFSLSSENPYTLNPYKLTGVSLEIGTLASSPRVWYRTADDDIYETSAVDLLDDNDPWIRTTDFTQSGAIRRCLGYRVFISPRDHNKWTKVLDYLKTQRVNTEHKDVMDFWY", "length": 211, "header": "tr|Q9SHT7-1|Q9SHT7_ARATH Isoform 1 of RNA-dependent RNA polymerase-like protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9SHT7-1" }, "locus": { "chromosome": "2", "start_pos": 1960413, "end_pos": 1961425, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT2G05370.1", "url": "https://www.ensemblgenomes.org/id/AT2G05370.1" }, { "database": "Ensembl Peptide", "id": "AT2G05370.1", "url": "https://www.ensemblgenomes.org/id/AT2G05370.1" } ] } } ], "glycosylation": [], "phosphorylation": [ { "start_pos": 24, "end_pos": 24, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Thr", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SHT7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SHT7" } ], "site_lbl": "Thr24" }, { "start_pos": 26, "end_pos": 26, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Tyr", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SHT7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SHT7" } ], "site_lbl": "Tyr26" } ], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "1999", "authors": "Lin X, Kaul S, Rounsley S, Shea T P, Benito M I, Town C D, Fujii C Y, Mason T, Bowman C L, Barnstead M, Feldblyum T V, Buell C R, Ketchum K A, Lee J, Ronning C M, Koo H L, Moffat K S, Cronin L A, Shen M, Pai G, Van Aken S, Umayam L, Tallon L J, Gill J E, Adams M D, Carrera A J, Creasy T H, Goodman H M, Somerville C R, Copenhaver G P, Preuss D, Nierman W C, White O, Eisen J A, Salzberg S L, Fraser C M, Venter J C", "evidence": [ { "database": "UniProtKB", "id": "Q58G28", "url": "https://www.uniprot.org/uniprotkb/Q58G28" } ], "reference": [ { "type": "PubMed", "id": "10617197", "url": "https://glygen.org/publication/PubMed/10617197" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q58G28", "url": "https://www.uniprot.org/uniprotkb/Q58G28" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT2G05370", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT2G05370", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "RNA-directed RNA polymerase activity", "id": "GO:0003968", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003968", "evidence": [ { "database": "UniProtKB", "id": "Q9SHT7", "url": "https://www.uniprot.org/uniprotkb/Q9SHT7" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "Q9SHT7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SHT7" }, { "id": "PF24572", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF24572" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "RNA-dependent RNA polymerase 6-like RNA-binding", "eco_id": "ECO_0000259", "start_pos": 6, "end_pos": 102, "start_aa": "Val", "end_aa": "Phe", "glycosite_overlap": [] }, { "evidence": [ { "id": "Q9SHT7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SHT7" }, { "id": "PF24577", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF24577" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "RNA-dependent RNA polymerase 6-like second", "eco_id": "ECO_0000259", "start_pos": 126, "end_pos": 199, "start_aa": "Thr", "end_aa": "Val", "glycosite_overlap": [] } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [ 24, 26 ], "sequon_annotation_sites": [] }, 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"categories": [ "Protein" ] }, { "id": "Q9SGX2-1", "url": "https://www.uniprot.org/uniprotkb/Q9SGX2-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MNIINTGTVDNVEFSIQNLIKSWCRRRKWRQLCNFSPKQQQEELISINQQWRITLSNFLESYQVHLFTIFLLSLDIILTSLELSSSLLSCTSVKKTETENEWFRWGGTVILSILAVKSMALVVAMGKSFFKQPGCVMDGTLAIVALILQVLLEKKGTGFIVVVSLWRVLRVVETAFELSDEAIEVQIDGIISQFQALSKENRTLLETLAEKDEVIKMLEEELNRFKENGDIPFVKP", "length": 236, "header": "tr|Q9SGX2-1|Q9SGX2_ARATH Isoform 1 of Voltage-gated hydrogen channel 1 OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9SGX2-1" }, "isoforms": [ { "isoform_ac": "Q9SAC3-1", "url": "https://www.uniprot.org/uniprotkb/Q9SAC3/entry", "sequence": { "sequence": "MALVVAMGKSFFKQPGCVMDGTLAIVALILQVLLEKKGTGFIVVVSLWRVLRVVETAFELSDEAIEVQIDGIISQFQALSKENRTLLETLAEKDEVIKMLEEELNRFKENGDIPFVKP", "length": 118, "header": "tr|Q9SAC3-1|Q9SGX2_ARATH Computationally mapped isoform of Voltage-gated hydrogen channel 1 OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9SGX2-1" }, "locus": { "chromosome": "1", "start_pos": 3598079, "end_pos": 3598867, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT1G10800.1", "url": "https://www.ensemblgenomes.org/id/AT1G10800.1" }, { "database": "Ensembl Peptide", "id": "AT1G10800.1", "url": "https://www.ensemblgenomes.org/id/AT1G10800.1" } ] } }, { "isoform_ac": "Q9SGX2-1", "url": "https://www.uniprot.org/uniprotkb/Q9SGX2/entry", "sequence": { "sequence": "MNIINTGTVDNVEFSIQNLIKSWCRRRKWRQLCNFSPKQQQEELISINQQWRITLSNFLESYQVHLFTIFLLSLDIILTSLELSSSLLSCTSVKKTETENEWFRWGGTVILSILAVKSMALVVAMGKSFFKQPGCVMDGTLAIVALILQVLLEKKGTGFIVVVSLWRVLRVVETAFELSDEAIEVQIDGIISQFQALSKENRTLLETLAEKDEVIKMLEEELNRFKENGDIPFVKP", "length": 236, "header": "tr|Q9SGX2-1|Q9SGX2_ARATH Isoform 1 of Voltage-gated hydrogen channel 1 OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9SGX2-1" }, "locus": { "chromosome": "1", "start_pos": 3598069, "end_pos": 3598885, "strand": "+", "evidence": [ { "database": 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Liu S X, Liu Z A, Luros J S, Maiti R, Marziali A, Militscher J, Miranda M, Nguyen M, Nierman W C, Osborne B I, Pai G, Peterson J, Pham P K, Rizzo M, Rooney T, Rowley D, Sakano H, Salzberg S L, Schwartz J R, Shinn P, Southwick A M, Sun H, Tallon L J, Tambunga G, Toriumi M J, Town C D, Utterback T, Van Aken S, Vaysberg M, Vysotskaia V S, Walker M, Wu D, Yu G, Fraser C M, Venter J C, Davis R W", "evidence": [ { "database": "UniProtKB", "id": "Q9SAC3", "url": "https://www.uniprot.org/uniprotkb/Q9SAC3" } ], "reference": [ { "type": "PubMed", "id": "11130712", "url": "https://glygen.org/publication/PubMed/11130712" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9SAC3", "url": "https://www.uniprot.org/uniprotkb/Q9SAC3" } ], 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"locus": {} } ], "crossref": [ { "id": "AT3G10760", "url": "https://bar.utoronto.ca/thalemine/portal.do?externalids=AT3G10760", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "820245", "url": "https://www.ncbi.nlm.nih.gov/gene/820245", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "Q9SG82", "url": "https://www.ebi.ac.uk/intact/interactors/id:Q9SG82*", "database": "IntAct", "categories": [ "Other" ] }, { "id": "IPR001005", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001005", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR006447", "url": "https://www.ebi.ac.uk/interpro/entry/IPR006447", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR009057", "url": "https://www.ebi.ac.uk/interpro/entry/IPR009057", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR017930", "url": "https://www.ebi.ac.uk/interpro/entry/IPR017930", "database": 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"url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00249", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_187687", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_187687", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G10760", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G10760", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9SG82", "url": "https://www.uniprot.org/uniprotkb/Q9SG82", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9SG82-1", "url": "https://www.uniprot.org/uniprotkb/Q9SG82-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MREDDSDWFARWEEELPSPEELMPISQSLISPDLALAFDIRTPNHGNGNSNQPHHHHHHQTTPPTPSQLQLPSSQANSSAEFAADSADLGSGGAAGDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSSGGGAGSDPATDRLFASSPVPAHFLHPNRVPSSDHFMPSFVPIATLQQQQQMAAAAAAAAAANPHLQPPQFHRQIAAAHFGSPTNGGFSSPTSNGQFGSPTSNGFGSPTTNGKFDPSFLAVRQTQQQPIQRMSTPSLHSPVSNYVEDLESANANGGRTVLTLFPTRDD", "length": 335, "header": "tr|Q9SG82-1|Q9SG82_ARATH Isoform 1 of Homeodomain-like superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SG82-1" }, "isoforms": [ { "isoform_ac": "Q9SG82-1", "url": "https://www.uniprot.org/uniprotkb/Q9SG82/entry", "sequence": { "sequence": "MREDDSDWFARWEEELPSPEELMPISQSLISPDLALAFDIRTPNHGNGNSNQPHHHHHHQTTPPTPSQLQLPSSQANSSAEFAADSADLGSGGAAGDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSSGGGAGSDPATDRLFASSPVPAHFLHPNRVPSSDHFMPSFVPIATLQQQQQMAAAAAAAAAANPHLQPPQFHRQIAAAHFGSPTNGGFSSPTSNGQFGSPTSNGFGSPTTNGKFDPSFLAVRQTQQQPIQRMSTPSLHSPVSNYVEDLESANANGGRTVLTLFPTRDD", "length": 335, "header": "tr|Q9SG82-1|Q9SG82_ARATH Isoform 1 of Homeodomain-like superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SG82-1" }, "locus": { "chromosome": "3", "start_pos": 3369479, "end_pos": 3371575, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G10760.1", "url": "https://www.ensemblgenomes.org/id/AT3G10760.1" }, { "database": "Ensembl Peptide", "id": "AT3G10760.1", "url": "https://www.ensemblgenomes.org/id/AT3G10760.1" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "other", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 65, "start_aa": "Thr", "end_pos": 65, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr65", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ], "filter_code": "000000000000000010000.00000000001000.0.01000" } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, 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E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9SG83", "url": "https://www.uniprot.org/uniprotkb/Q9SG83" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "A large-scale protein phosphorylation analysis reveals novel phosphorylation motifs and phosphoregulatory networks in Arabidopsis.", "journal": "Journal of proteomics", "date": "2013-01-14", "authors": "Wang Xu, Bian Yangyang, Cheng Kai, Gu Li-Fei, Ye Mingliang, Zou Hanfa, Sun Samuel Sai-Ming, He Jun-Xian", "evidence": [ { "database": "iPTMnet", "id": "Q9SG83", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SG83" } ], "reference": [ { "type": "PubMed", "id": "23111157", "url": 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protein amino-terminal domain protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SGJ0-1" }, "locus": { "chromosome": "3", "start_pos": 288741, "end_pos": 292755, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G01810.2", "url": "https://www.ensemblgenomes.org/id/AT3G01810.2" }, { "database": "Ensembl Peptide", "id": "AT3G01810.2", "url": "https://www.ensemblgenomes.org/id/AT3G01810.2" } ] } } ], "glycosylation": [], "phosphorylation": [ { "start_pos": 170, "end_pos": 170, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SGJ0", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SGJ0" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ], "site_lbl": "Ser170" }, { "start_pos": 174, "end_pos": 174, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", 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"iPTMnet", "id": "Q9SGJ0", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SGJ0" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" } ], "site_lbl": "Ser742" }, { "start_pos": 873, "end_pos": 873, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Tyr", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SGJ0", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SGJ0" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" } ], "site_lbl": "Tyr873" }, { "start_pos": 874, "end_pos": 874, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Thr", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SGJ0", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SGJ0" }, { "database": "PubMed", "id": 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884, "end_pos": 884, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SGJ0", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SGJ0" }, { "database": "PubMed", "id": "26187819", "url": "https://glygen.org/publication/PubMed/26187819" } ], "site_lbl": "Ser884" } ], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9SGJ0", "url": "https://www.uniprot.org/uniprotkb/Q9SGJ0" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Quantitative phosphoproteomics of early elicitor signaling in Arabidopsis.", "journal": "Molecular & cellular proteomics : MCP", "date": "2007-07", "authors": "Benschop Joris J, Mohammed Shabaz, O'Flaherty Martina, Heck Albert J R, Slijper Monique, Menke Frank L H", "evidence": [ { "database": "iPTMnet", "id": "Q9SGJ0", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SGJ0" } ], "reference": [ { "type": "PubMed", "id": "17317660", "url": "https://glygen.org/publication/PubMed/17317660" } ] }, { "title": "Large-scale comparative phosphoproteomics identifies conserved phosphorylation sites in plants.", "journal": "Plant physiology", "date": "2010-07", "authors": "Nakagami Hirofumi, Sugiyama Naoyuki, Mochida Keiichi, Daudi Arsalan, Yoshida Yuko, Toyoda Tetsuro, Tomita Masaru, Ishihama Yasushi, Shirasu Ken", "evidence": [ { "database": "iPTMnet", "id": "Q9SGJ0", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SGJ0" } ], "reference": [ { "type": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" } ] }, { "title": "Comparative phosphoproteome profiling reveals a function of the STN8 kinase in fine-tuning of cyclic electron flow (CEF).", "journal": "Proceedings of the National Academy of Sciences of the United States of America", "date": "2011-08-02", "authors": "Reiland Sonja, Finazzi Giovanni, Endler Anne, Willig Adrian, Baerenfaller Katja, Grossmann Jonas, Gerrits Bertran, Rutishauser Dorothea, Gruissem Wilhelm, Rochaix Jean-David, Baginsky Sacha", "evidence": [ { "database": "iPTMnet", "id": "Q9SGJ0", "url": 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"database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9SGP9", "url": "https://www.uniprot.org/uniprotkb/Q9SGP9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9SGP9-1", "url": "https://www.uniprot.org/uniprotkb/Q9SGP9-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MVLPLMKLGTLAVKTISKPLASQLKHQAKVHPKFRQSIINFAQRNHRITTQMQRRIYGHATDVEIRPLDEEKAVQAAVDLIGEIFLFGVGGAVVVFEVQRSSRSEARKEEARKQELEELRIKDEELEKQVADLKSKLEELEQLAKARGLSGIFQLKPQPGTTASGKPDKSS", "length": 171, "header": "tr|Q9SGP9-1|Q9SGP9_ARATH Isoform 1 of Optic atrophy 3 protein (OPA3) OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SGP9-1" }, "isoforms": [ { "isoform_ac": "Q9SGP9-1", "url": "https://www.uniprot.org/uniprotkb/Q9SGP9/entry", "sequence": { "sequence": "MVLPLMKLGTLAVKTISKPLASQLKHQAKVHPKFRQSIINFAQRNHRITTQMQRRIYGHATDVEIRPLDEEKAVQAAVDLIGEIFLFGVGGAVVVFEVQRSSRSEARKEEARKQELEELRIKDEELEKQVADLKSKLEELEQLAKARGLSGIFQLKPQPGTTASGKPDKSS", "length": 171, "header": "tr|Q9SGP9-1|Q9SGP9_ARATH Isoform 1 of Optic atrophy 3 protein (OPA3) OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SGP9-1" }, "locus": { "chromosome": "1", "start_pos": 10023817, "end_pos": 10026311, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT1G28510.1", "url": "https://www.ensemblgenomes.org/id/AT1G28510.1" }, { "database": "Ensembl Peptide", "id": "AT1G28510.1", "url": "https://www.ensemblgenomes.org/id/AT1G28510.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Theologis A, Ecker J R, Palm C J, Federspiel N A, Kaul S, White O, Alonso J, Altafi H, Araujo R, Bowman C L, Brooks S Y, Buehler E, Chan A, Chao Q, Chen H, Cheuk R F, Chin C W, Chung M K, Conn L, Conway A B, Conway A R, Creasy T H, Dewar K, Dunn P, Etgu P, Feldblyum T V, Feng J, Fong B, Fujii C Y, Gill J E, Goldsmith A D, Haas B, Hansen N F, Hughes B, Huizar L, Hunter J L, Jenkins J, Johnson-Hopson C, Khan S, Khaykin E, Kim C J, Koo H L, Kremenetskaia I, Kurtz D B, Kwan A, Lam B, Langin-Hooper S, Lee A, Lee J M, Lenz C A, Li J H, Li Y, Lin X, Liu S X, Liu Z A, Luros J S, Maiti R, Marziali A, Militscher J, Miranda M, Nguyen M, Nierman W C, Osborne B I, Pai G, Peterson J, Pham P K, Rizzo M, Rooney T, Rowley D, Sakano H, Salzberg S L, Schwartz J R, Shinn P, Southwick A M, Sun H, Tallon L J, Tambunga G, Toriumi M J, Town C D, Utterback T, Van Aken S, Vaysberg M, Vysotskaia V S, Walker M, Wu D, Yu G, Fraser C M, Venter J C, Davis R W", "evidence": [ { "database": "UniProtKB", "id": "Q9SGP9", "url": "https://www.uniprot.org/uniprotkb/Q9SGP9" } ], "reference": [ { "type": "PubMed", "id": "11130712", "url": "https://glygen.org/publication/PubMed/11130712" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9SGP9", "url": "https://www.uniprot.org/uniprotkb/Q9SGP9" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT1G28510", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT1G28510", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A287B9I5-1", "protein_name": "Outer mitochondrial membrane lipid metabolism regulator OPA3", "gene_name": "OPA3", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MVVGAFPMAKLLYLGIRQVSKPLANRIKEAARRSEFFKTYICLPPAQLYHWVEMRTKMRIMGFRGTVIKPLNEEAAAELGAELLGEATIFIVGGGCLVLEYWRHQAQQRHKEEEQRAAWDAMRDEVGHLALAVEALQAQMQAAPPQGALEELKVQVQEVRSQLGARDPSSTSKAVSTSKE", "length": 180 }, "evidence": [ { "id": "Q9SGP9", "url": "https://omabrowser.org/oma/group/Q9SGP9/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8V0XZJ2-1", "protein_name": "Outer mitochondrial membrane lipid metabolism regulator OPA3", "gene_name": "OPA3", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MVAGAFPIAKLLTLGARQLSRPLAARIKAGARASPFFRTYICLPPAQLYHWVEMRAKMRIMGFRGAAVKPLNEEAAAELGAELLGEAIVFGVGGLCLYLEYSRQAGQARRREEEQAAALRDMAAALERMRGELDALLAERGGATPSPAPTQSPAPNPSPAPAAQLVPAH", "length": 169 }, "evidence": [ { "id": "Q9SGP9", "url": "https://omabrowser.org/oma/group/Q9SGP9/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "Q0KI22-1", "protein_name": "OPA3-like protein CG13603", "gene_name": "BcDNA:AT03227", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": 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{ "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], 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"https://www.ncbi.nlm.nih.gov/protein/NP_175998" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9SGT0", "url": "https://www.uniprot.org/uniprotkb/Q9SGT0" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9SGT0", "locus": {} } ], "crossref": [ { "id": "AT1G56020", "url": "https://bar.utoronto.ca/thalemine/portal.do?externalids=AT1G56020", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "842053", "url": "https://www.ncbi.nlm.nih.gov/gene/842053", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "ath:AT1G56020", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT1G56020", "database": "KEGG Pathway", 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"https://www.uniprot.org/uniprotkb/Q9SGT0-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MASACVKSAGVSPEKFSSYGWTSPRMSLTRDDNRRSSSVDKQQSDPLPEIQDPVVDFEFCLEDPVTMLSADELFSDGKLVPLKFSGPKTTTTTTSTTVNTTTTEPRGSPEVLKSCRRLEMEISDLFSPKAPRCTTRWRELLGLKRLVNAKEQEESIKASSSSSSTNPKTSSFKQFLHRGSKSSTAASSPLQKESDISESISVASSRLSLSSSSSSSHEIDDLPRLSLDLDKPSANPFAPSRTHSRNLNQPRIRLAKPRRNHPPSTPSVDGSSSSSACIESRGLTVTADSPRLNASGKIVFHGLERSSSSPGSFTGGPRMKQHHGMPRSYSANVRITPVLNVPVCSLKSGLFFGQLFSSSSSSSSSSPSPGNKSQLQSNGSKNRINRTRLEPKFEQLEK", "length": 398, "header": "tr|Q9SGT0-1|Q9SGT0_ARATH Isoform 1 of Serine/arginine repetitive matrix-like protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SGT0-1" }, "isoforms": [ { "isoform_ac": "Q9SGT0-1", "url": "https://www.uniprot.org/uniprotkb/Q9SGT0/entry", "sequence": { "sequence": "MASACVKSAGVSPEKFSSYGWTSPRMSLTRDDNRRSSSVDKQQSDPLPEIQDPVVDFEFCLEDPVTMLSADELFSDGKLVPLKFSGPKTTTTTTSTTVNTTTTEPRGSPEVLKSCRRLEMEISDLFSPKAPRCTTRWRELLGLKRLVNAKEQEESIKASSSSSSTNPKTSSFKQFLHRGSKSSTAASSPLQKESDISESISVASSRLSLSSSSSSSHEIDDLPRLSLDLDKPSANPFAPSRTHSRNLNQPRIRLAKPRRNHPPSTPSVDGSSSSSACIESRGLTVTADSPRLNASGKIVFHGLERSSSSPGSFTGGPRMKQHHGMPRSYSANVRITPVLNVPVCSLKSGLFFGQLFSSSSSSSSSSPSPGNKSQLQSNGSKNRINRTRLEPKFEQLEK", "length": 398, "header": "tr|Q9SGT0-1|Q9SGT0_ARATH Isoform 1 of Serine/arginine repetitive matrix-like protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SGT0-1" }, "locus": { "chromosome": "1", "start_pos": 20951856, "end_pos": 20953595, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT1G56020.1", "url": "https://www.ensemblgenomes.org/id/AT1G56020.1" }, { "database": "Ensembl Peptide", "id": "AT1G56020.1", "url": "https://www.ensemblgenomes.org/id/AT1G56020.1" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "other", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 265, "start_aa": "Thr", "end_pos": 265, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr265", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ], "filter_code": "000000000000000010000.00000000001000.0.01000" } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Theologis A, Ecker J R, Palm C J, Federspiel N A, Kaul S, White O, Alonso J, Altafi H, Araujo R, Bowman C L, Brooks S Y, Buehler E, Chan A, Chao Q, Chen H, Cheuk R F, Chin C W, Chung M K, Conn L, Conway A B, Conway A R, Creasy T H, Dewar K, Dunn P, Etgu P, Feldblyum T V, Feng J, Fong B, Fujii C Y, Gill J E, Goldsmith A D, Haas B, Hansen N F, Hughes B, Huizar L, Hunter J L, Jenkins J, Johnson-Hopson C, Khan S, Khaykin E, Kim C J, Koo H L, Kremenetskaia I, Kurtz D B, Kwan A, Lam B, Langin-Hooper S, Lee A, Lee J M, Lenz C A, Li J H, Li Y, Lin X, Liu S X, Liu Z A, Luros J S, Maiti R, Marziali A, Militscher J, Miranda M, Nguyen M, Nierman W C, Osborne B I, Pai G, Peterson J, Pham P K, Rizzo M, Rooney T, Rowley D, Sakano H, Salzberg S L, Schwartz J R, Shinn P, Southwick A M, Sun H, Tallon L J, Tambunga G, Toriumi M J, Town C D, Utterback T, Van Aken S, Vaysberg M, Vysotskaia V S, Walker M, Wu D, Yu G, Fraser C M, Venter J C, Davis R W", "evidence": [ { "database": "UniProtKB", "id": "Q9SGT0", "url": "https://www.uniprot.org/uniprotkb/Q9SGT0" } ], "reference": [ { "type": "PubMed", "id": "11130712", "url": "https://glygen.org/publication/PubMed/11130712" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9SGT0", "url": "https://www.uniprot.org/uniprotkb/Q9SGT0" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT1G56020", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT1G56020", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q9SGT0", "url": "https://www.uniprot.org/uniprotkb/Q9SGT0" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 293, "end_pos": 295, "annotation": "n_glycosylation_sequon" }, { "start_pos": 371, "end_pos": 373, "annotation": "n_glycosylation_sequon" }, { "start_pos": 378, "end_pos": 380, "annotation": "n_glycosylation_sequon" }, { "start_pos": 385, "end_pos": 387, "annotation": "n_glycosylation_sequon" }, { "start_pos": 99, "end_pos": 101, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [ 265 ], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 293, "end_pos": 295 }, { "start_pos": 371, "end_pos": 373 }, { "start_pos": 378, "end_pos": 380 }, { "start_pos": 385, "end_pos": 387 }, { "start_pos": 99, "end_pos": 101 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 1 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 1 }, { "field": "exact_o_linked_sites", "count": 1 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": 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isomerase D27 OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SGU7-1" }, "locus": { "chromosome": "1", "start_pos": 24035968, "end_pos": 24037401, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT1G64680.2", "url": "https://www.ensemblgenomes.org/id/AT1G64680.2" }, { "database": "Ensembl Peptide", "id": "AT1G64680.2", "url": "https://www.ensemblgenomes.org/id/AT1G64680.2" } ] } }, { "isoform_ac": "Q9SGU7-1", "url": "https://www.uniprot.org/uniprotkb/Q9SGU7/entry", "sequence": { "sequence": "MAAIASLQAVNLTFRRRSTRCGIAEPSGEPAPMGLKTRYEDGLVERVFMGLFARKMDKFGSKKKKDTKEKGFWEYDYESFVEVSKRVMQGRSRVQQQEAVREVLLSMLPPGAPEQFRKLFPPTKWAAEFNAALTVPFFHWLVGPSQVIEVEVNGVKQRSGVRIKKCRYLENSGCVGMCVNMCKIPTQDFFTNEFGLPLTMNPNYEDMSCEMIYGQAPPAFEEDVATKQPCLADICSMSNPSSPICPKLEA", "length": 250, "header": "tr|Q9SGU7-1|Q9SGU7_ARATH Isoform 1 of Beta-carotene isomerase D27 OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SGU7-1" }, "locus": { "chromosome": "1", "start_pos": 24035941, 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Langin-Hooper S, Lee A, Lee J M, Lenz C A, Li J H, Li Y, Lin X, Liu S X, Liu Z A, Luros J S, Maiti R, Marziali A, Militscher J, Miranda M, Nguyen M, Nierman W C, Osborne B I, Pai G, Peterson J, Pham P K, Rizzo M, Rooney T, Rowley D, Sakano H, Salzberg S L, Schwartz J R, Shinn P, Southwick A M, Sun H, Tallon L J, Tambunga G, Toriumi M J, Town C D, Utterback T, Van Aken S, Vaysberg M, Vysotskaia V S, Walker M, Wu D, Yu G, Fraser C M, Venter J C, Davis R W", "evidence": [ { "database": "UniProtKB", "id": "Q9SGU7", "url": "https://www.uniprot.org/uniprotkb/Q9SGU7" } ], "reference": [ { "type": "PubMed", "id": "11130712", "url": "https://glygen.org/publication/PubMed/11130712" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9SGU7", "url": "https://www.uniprot.org/uniprotkb/Q9SGU7" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT1G64680", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT1G64680", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 3, "go_terms": [ { "name": "iron ion binding", "id": "GO:0005506", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005506", "evidence": [ { "database": "UniProtKB", "id": "Q9SGU7", "url": "https://www.uniprot.org/uniprotkb/Q9SGU7" } ], "pmid": "" }, { "name": "carotenoid isomerase activity", "id": "GO:0046608", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046608", "evidence": [ { "database": "UniProtKB", "id": "Q9SGU7", "url": "https://www.uniprot.org/uniprotkb/Q9SGU7" } ], "pmid": "" }, { "name": "isomerase activity", "id": "GO:0016853", "url": 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"total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "Q9SGV6-1", "uniprot_ac": "Q9SGV6", "uniprot_id": "Q9SGV6_ARATH", "mass": { "chemical_mass": 36381.0, "monoisotopic_mass": 36381.0 }, "refseq": {}, "gene_names": [ { "name": "F1N19.16", "type": "synonym", "evidence": [ { "id": "Q9SGV6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SGV6" } ] }, { "name": "F1N19_16", "type": "synonym", "evidence": [ { "id": "Q9SGV6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SGV6" } ] } ], "protein_names": [ { "name": "NAD(P)-binding Rossmann-fold superfamily protein", "type": "synonym", "evidence": [ { "id": "Q9SGV6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SGV6/entry#names_and_taxonomy" } ] } ], "function": [], 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"Other" ] }, { "id": "AT1G64590", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT1G64590", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9SGV6", "url": "https://www.uniprot.org/uniprotkb/Q9SGV6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9SGV6-1", "url": "https://www.uniprot.org/uniprotkb/Q9SGV6-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MIETVKHLIGSGGPSGFGSRSTADHVTCNSDLRSLTAIITGATSGIGAETARVLAKRGARLVLPARSVKTAEETKARILSEFPDAEIIVMHLDLSSLTSVRRFVDDFESLNLPLNILINNAGKYAHKHALSEDGVEMTFATNYLGHFLLTKLLLKKMIETAAQTGVQGRIVNVTSVVHSWFSGDMLQYLADISRNNRNYDATRAYALSKLANVLHTVELSRLLHKMDANVTANCVHPGIVKTRLTRDREGVVTDLVFFLTSKLLKSVPQAAATTCYVATSPRLRNVCGKYFSDCNEARSSKSGSCNLKAQRLWTASDLLVSPPNSTTNLSHTSF", "length": 334, "header": "tr|Q9SGV6-1|Q9SGV6_ARATH Isoform 1 of NAD(P)-binding Rossmann-fold superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=3 SV=1 CANONICAL=Q9SGV6-1" }, 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{}, "start_pos": 297, "start_aa": "Thr", "end_pos": 297, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr297", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ], "filter_code": "000000000000000010000.00000000001000.0.01000" } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Theologis A, Ecker J R, Palm C J, Federspiel N A, Kaul S, White O, Alonso J, Altafi H, Araujo R, Bowman C L, Brooks S Y, Buehler E, Chan A, Chao Q, Chen H, Cheuk R F, Chin C W, Chung M K, Conn L, Conway A B, Conway A R, Creasy T H, Dewar K, Dunn P, Etgu P, Feldblyum T V, Feng J, Fong B, Fujii C Y, Gill J E, Goldsmith A D, Haas B, Hansen N F, Hughes B, Huizar L, Hunter J L, Jenkins J, Johnson-Hopson C, Khan S, Khaykin E, Kim C J, Koo H L, Kremenetskaia I, Kurtz D B, Kwan A, Lam B, Langin-Hooper S, Lee A, Lee J M, Lenz C A, Li J H, Li Y, Lin X, Liu S X, Liu Z A, Luros J S, Maiti R, Marziali A, Militscher J, Miranda M, Nguyen M, Nierman W C, Osborne B I, Pai G, Peterson J, Pham P K, Rizzo M, Rooney T, Rowley D, Sakano H, Salzberg S L, Schwartz J R, Shinn P, Southwick A M, Sun H, Tallon L J, Tambunga G, Toriumi M J, Town C D, Utterback T, Van Aken S, Vaysberg M, Vysotskaia V S, Walker M, Wu D, Yu G, Fraser C M, Venter J C, Davis R W", "evidence": [ { "database": "UniProtKB", "id": "Q9SGW9", "url": "https://www.uniprot.org/uniprotkb/Q9SGW9" } ], "reference": [ { "type": "PubMed", "id": "11130712", "url": "https://glygen.org/publication/PubMed/11130712" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9SGW9", "url": "https://www.uniprot.org/uniprotkb/Q9SGW9" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT1G64450", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT1G64450", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "extracellular region", "id": "GO:0005576", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005576", "evidence": [ { "database": "UniProtKB", "id": "Q9SGW9", "url": "https://www.uniprot.org/uniprotkb/Q9SGW9" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 62, "end_pos": 64, "annotation": "n_glycosylation_sequon" }, { "start_pos": 66, "end_pos": 68, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], 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"categories": [ "Protein Classification" ] }, { "id": "IPR018253", "url": "https://www.ebi.ac.uk/interpro/entry/IPR018253", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036869", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036869", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR050817", "url": "https://www.ebi.ac.uk/interpro/entry/IPR050817", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT1G77930", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT1G77930", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "DHRVNPM", "url": "https://omabrowser.org/oma/group/DHRVNPM/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR24074", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24074", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00226", "url": 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"MSNLRAICRPYSVFSSIVCCSRHQSRSLFRVSIKNVAFRNQSSNSSWFRSKNSNLWFRLNQRKTLVRASNWSQEKSPYDTLELDRNAEEEQIKVAYRRLAKFYHPDVYDGKGTLEEGETAEARFIKIQAAYELLMDSEKKVQYDMDNRVNPMKASQAWMEWLMKKRKAFDQRGDMAVAAWAEQQQLDINLRARRLSRSKVDPEEERKILEKEKKASRELFNSTLKRHTLVLKKRDLMRKKAEEDKKKLITQLLAAEGLELDTEAEEEEAAK", "length": 271, "header": "tr|Q9SH08-1|Q9SH08_ARATH Isoform 1 of Chaperone DnaJ-domain superfamily protein OS=Arabidopsis thaliana OX=3702 GN=DJC65 PE=1 SV=1 CANONICAL=Q9SH08-1" }, "isoforms": [ { "isoform_ac": "A0A1P8ASJ9-1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ASJ9/entry", "sequence": { "sequence": "MSNLRAICRPYSVFSSIVCCSRHQSRSLFRVSIKNVAFRNQSSNSSWFRSKNSNLWFRLNQRKTLVRASNWSQEKSPYDTLELDRNAEEEQIKVAYRRLAKFYHPDVYDGKGTLEEGETAEARFIKIQAAYELLMDSEKKVQYDMDNRVNPMKASQAWMEWLMKKRKAFDQRGDMAVAAWAEQQQLDINLRARRLSRSKVRNNVSF", "length": 206, "header": "tr|A0A1P8ASJ9-1|A0A1P8ASJ9_ARATH Computationally mapped isoform of Chaperone DnaJ-domain superfamily protein OS=Arabidopsis thaliana OX=3702 GN=DJC65 PE=1 SV=1 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S, Lee A, Lee J M, Lenz C A, Li J H, Li Y, Lin X, Liu S X, Liu Z A, Luros J S, Maiti R, Marziali A, Militscher J, Miranda M, Nguyen M, Nierman W C, Osborne B I, Pai G, Peterson J, Pham P K, Rizzo M, Rooney T, Rowley D, Sakano H, Salzberg S L, Schwartz J R, Shinn P, Southwick A M, Sun H, Tallon L J, Tambunga G, Toriumi M J, Town C D, Utterback T, Van Aken S, Vaysberg M, Vysotskaia V S, Walker M, Wu D, Yu G, Fraser C M, Venter J C, Davis R W", "evidence": [ { "database": "UniProtKB", "id": "Q9SH26", "url": "https://www.uniprot.org/uniprotkb/Q9SH26" } ], "reference": [ { "type": "PubMed", "id": "11130712", "url": "https://glygen.org/publication/PubMed/11130712" } ] }, { "title": "Genome-wide analysis of Arabidopsis pentatricopeptide repeat proteins reveals their essential role in organelle biogenesis.", "journal": "Plant Cell", "date": "2004", "authors": "Lurin Claire, Andr\u00e9s Charles, Aubourg S\u00e9bastien, Bellaoui Mohammed, Bitton Fr\u00e9d\u00e9rique, Bruy\u00e8re Cl\u00e9mence, Caboche Michel, Debast C\u00e9drig, Gualberto Jos\u00e9, Hoffmann Beate, Lecharny Alain, Le Ret Monique, Martin-Magniette Marie-Laure, Mireau Hakim, Peeters Nemo, Renou Jean-Pierre, Szurek Boris, Taconnat Ludivine, Small Ian", "evidence": [ { "database": "UniProtKB", "id": "Q9SH26", "url": "https://www.uniprot.org/uniprotkb/Q9SH26" } ], "reference": [ { "type": "PubMed", "id": "15269332", "url": "https://glygen.org/publication/PubMed/15269332" } ] }, { "title": "Integrating Phosphoproteomics and Bioinformatics to Study Brassinosteroid-Regulated Phosphorylation Dynamics in Arabidopsis.", "journal": "BMC genomics", "date": "2015-07-18", "authors": "Lin Li-Ling, Hsu Chia-Lang, Hu Chia-Wei, Ko Shiao-Yun, Hsieh Hsu-Liang, Huang Hsuan-Cheng, Juan Hsueh-Fen", "evidence": [ { "database": "iPTMnet", "id": "Q9SH26", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SH26" } ], "reference": [ { "type": "PubMed", "id": "26187819", "url": 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Militscher J, Miranda M, Nguyen M, Nierman W C, Osborne B I, Pai G, Peterson J, Pham P K, Rizzo M, Rooney T, Rowley D, Sakano H, Salzberg S L, Schwartz J R, Shinn P, Southwick A M, Sun H, Tallon L J, Tambunga G, Toriumi M J, Town C D, Utterback T, Van Aken S, Vaysberg M, Vysotskaia V S, Walker M, Wu D, Yu G, Fraser C M, Venter J C, Davis R W", "evidence": [ { "database": "UniProtKB", "id": "Q9SH64", "url": "https://www.uniprot.org/uniprotkb/Q9SH64" } ], "reference": [ { "type": "PubMed", "id": "11130712", "url": "https://glygen.org/publication/PubMed/11130712" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9SH64", "url": "https://www.uniprot.org/uniprotkb/Q9SH64" } ], "reference": [ { "type": "PubMed", "id": "27862469", 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"o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 1 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 1 }, { "field": "exact_o_linked_sites", "count": 1 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "Q9SI77-1", "uniprot_ac": "Q9SI77", "uniprot_id": "Q9SI77_ARATH", "mass": { "chemical_mass": 34032.0, "monoisotopic_mass": 34032.0 }, "refseq": {}, "gene_names": [ { "name": "F23N19.9", "type": "synonym", "evidence": [ { "id": "Q9SI77", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SI77" } ] }, { "name": "F23N19_9", "type": "synonym", "evidence": [ { "id": "Q9SI77", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SI77" } ] } ], "protein_names": [ { "name": "Terpenoid synthases superfamily protein", "type": "synonym", "evidence": [ { "id": "Q9SI77", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SI77/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9SI77", "url": "https://www.uniprot.org/uniprotkb/Q9SI77" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9SI77", "locus": {} } ], "crossref": [ { "id": "AT1G62730", "url": "https://bar.utoronto.ca/thalemine/portal.do?externalids=AT1G62730", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "842571", "url": "https://www.ncbi.nlm.nih.gov/gene/842571", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR002060", "url": "https://www.ebi.ac.uk/interpro/entry/IPR002060", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR008949", "url": "https://www.ebi.ac.uk/interpro/entry/IPR008949", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT1G62730", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT1G62730", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "MINAREQ", "url": "https://omabrowser.org/oma/group/MINAREQ/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A1P8AN01", "url": "https://www.orthodb.org/?gene=A0A1P8AN01", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "Q9SI77", "url": "https://www.orthodb.org/?gene=Q9SI77", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR21181", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR21181", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR21181:SF13", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR21181:SF13", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00494", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00494", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "AT1G62730", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT1G62730", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "A0A1P8AN01", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AN01", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A1P8AN01-1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AN01-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9SI77", "url": "https://www.uniprot.org/uniprotkb/Q9SI77", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9SI77-1", "url": "https://www.uniprot.org/uniprotkb/Q9SI77-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MNGGGSSSLRSALSYCVQQVRNYDYHHYLCLLELPTEMRKAAFALRAFNVETARAMDVASDPKIGLMRLLWWQEAIDKLYTKKPINHPAAQALSWAISEHNISKPWLKRSVDARIRDAQREVDDIPESIAELEKYAEDTVSTLLYNTLQAGGISSTTADHAASHIGKASGLVLLLKSLPYHCTRNRHQSYIPADLAEKHGLLVKQGGRLEILLDNDSREGLSNVVFEIASVANAHLLKARELAGKVPAEAKPVLLHSVPVQVLLDSLNKVQFDVFDPRIQRGVLGVPPLLFQFKLKWYSWRAMF", "length": 304, "header": "tr|Q9SI77-1|Q9SI77_ARATH Isoform 1 of Terpenoid synthases superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SI77-1" }, "isoforms": [ { "isoform_ac": "A0A1P8AN01-1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AN01/entry", "sequence": { "sequence": "MNGGGSSSLRSALSYCVQQVRNYDYHHYLCLLELPTEMRKAAFALRAFNVETARAMDVASDPKIGLMRLLWWQEAIDKLYTKKPINHPAAQALSWAISEHNISKPWLKRSVDARIRDAQREVDDIPESIAELEKYAEDTVSTLLYNTLQAGGISSTTADHAASHIDLAEKHGLLVKQGGRLEILLDNDSREGLSNVVFEIASVANAHLLKARELAGKVPAEAKPVLLHSVPVQVLLDSLNKVQFDVFDPRIQRGVLGVPPLLFQFKLKWYSWRAMF", "length": 276, "header": "tr|A0A1P8AN01-1|A0A1P8AN01_ARATH Computationally mapped isoform of Terpenoid synthases superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SI77-1" }, "locus": { "chromosome": "1", "start_pos": 23229204, "end_pos": 23230742, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT1G62730.2", "url": "https://www.ensemblgenomes.org/id/AT1G62730.2" }, { "database": "Ensembl Peptide", "id": "AT1G62730.2", "url": "https://www.ensemblgenomes.org/id/AT1G62730.2" } ] } }, { "isoform_ac": "Q9SI77-1", "url": "https://www.uniprot.org/uniprotkb/Q9SI77/entry", "sequence": { "sequence": "MNGGGSSSLRSALSYCVQQVRNYDYHHYLCLLELPTEMRKAAFALRAFNVETARAMDVASDPKIGLMRLLWWQEAIDKLYTKKPINHPAAQALSWAISEHNISKPWLKRSVDARIRDAQREVDDIPESIAELEKYAEDTVSTLLYNTLQAGGISSTTADHAASHIGKASGLVLLLKSLPYHCTRNRHQSYIPADLAEKHGLLVKQGGRLEILLDNDSREGLSNVVFEIASVANAHLLKARELAGKVPAEAKPVLLHSVPVQVLLDSLNKVQFDVFDPRIQRGVLGVPPLLFQFKLKWYSWRAMF", "length": 304, "header": "tr|Q9SI77-1|Q9SI77_ARATH Isoform 1 of Terpenoid synthases superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SI77-1" }, "locus": { "chromosome": "1", "start_pos": 23229059, "end_pos": 23230818, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT1G62730.1", "url": "https://www.ensemblgenomes.org/id/AT1G62730.1" }, { "database": "Ensembl Peptide", "id": "AT1G62730.1", "url": "https://www.ensemblgenomes.org/id/AT1G62730.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Theologis A, Ecker J R, Palm C J, Federspiel N A, Kaul S, White O, Alonso J, Altafi H, Araujo R, Bowman C L, Brooks S Y, Buehler E, Chan A, Chao Q, Chen H, Cheuk R F, Chin C W, Chung M K, Conn L, Conway A B, Conway A R, Creasy T H, Dewar K, Dunn P, Etgu P, Feldblyum T V, Feng J, Fong B, Fujii C Y, Gill J E, Goldsmith A D, Haas B, Hansen N F, Hughes B, Huizar L, Hunter J L, Jenkins J, Johnson-Hopson C, Khan S, Khaykin E, Kim C J, Koo H L, Kremenetskaia I, Kurtz D B, Kwan A, Lam B, Langin-Hooper S, Lee A, Lee J M, Lenz C A, Li J H, Li Y, Lin X, Liu S X, Liu Z A, Luros J S, Maiti R, Marziali A, Militscher J, Miranda M, Nguyen M, Nierman W C, Osborne B I, Pai G, Peterson J, Pham P K, Rizzo M, Rooney T, Rowley D, Sakano H, Salzberg S L, Schwartz J R, Shinn P, Southwick A M, Sun H, Tallon L J, Tambunga G, Toriumi M J, Town C D, Utterback T, Van Aken S, Vaysberg M, Vysotskaia V S, Walker M, Wu D, Yu G, Fraser C M, Venter J C, Davis R W", "evidence": [ { "database": "UniProtKB", "id": "Q9SI77", "url": "https://www.uniprot.org/uniprotkb/Q9SI77" } ], "reference": [ { "type": "PubMed", "id": "11130712", "url": "https://glygen.org/publication/PubMed/11130712" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9SI77", "url": "https://www.uniprot.org/uniprotkb/Q9SI77" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT1G62730", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT1G62730", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A1D5PQC5-1", "protein_name": "NADH dehydrogenase (ubiquinone) complex I, assembly factor 6", "gene_name": "NDUFAF6", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MAAATAAGGLRPVSFPRLLRAVGARGGLPWPRGGRAAAAGWSRPEPGGEAQYCAELLRKRDYEGFLCSLLLPAESRTSAFALRAFNVELAQIKDSITQKTTGLMRMQFWRKAVEDIYCDNPPHQPVAVALWRAVKRHNLSKMWFMKIIDEREKNLDDRAYRNIQELETYAENTQSALFYLTLEMLGVRDVHADHAASHIGKAQGIVTCLRATPYHCARRKVFLPMDICMLHGVSQEDFIRCKQEKHVRDVIYDIASQAHIHLEHARSFSKKVPVKAYPAFYYTVALDDYLYNIRKVDFNIFHPSLQKRNTLLPLYLYIRTWKKTY", "length": 325 }, "evidence": [ { "id": "Q9SI77", "url": "https://omabrowser.org/oma/group/Q9SI77/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A2AIL4-1", "protein_name": "NADH dehydrogenase (ubiquinone) complex I, assembly factor 6", "gene_name": "Ndufaf6", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MATSMLGSVRGPRPFGLANLFHRQPPRDAWERVRRLPGPSAVRRSVAAASGPGIPGSHLYCLELLRKRDYESYLCSLLFPAECQRSASALRAFNVELAQVKDSVSEKTIGLMRMQFWKKAVEDMYCDNPPHQPVAIELWKAVKKHNLTKRWLMRIIDEREKNLDDKAYRSMQELENYAENTQGSLLYLTLEVLGVKDLHADHAASHIGKAQGIVTCLRATPYHSSRRQVFLPMDVCVQHGVSQEDFLRRNQDKNVRDVVYDIASQAHLHLKHARSFHRSVPAEAFPAFLQTVSLEDYLKKIQRVDFDIFHPSLQQKNMLLPLSLYIQSWRKRY", "length": 333 }, "evidence": [ { "id": "Q9SI77", "url": "https://omabrowser.org/oma/group/Q9SI77/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A7YVD7-1", "protein_name": "NADH dehydrogenase (ubiquinone) complex I, assembly factor 6", "gene_name": "NDUFAF6", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MAASTLGSAWGPLRLGVPGLCRRRPPRGLWARARRLSEPVASGRSVAAGSGLGASGTDRYCLELLRKRDYEGYLCSLLLPAESRSSAFALRAFNVELAQIKDSVSEKTIGLMRMQFWKKTVDDIYSDNPPHQPVAIELWKAVRRHNLTKRWLMKIIDEREKNLDDKAYRNIQELENYAENTQSSLLYLTLEILGIKDLHADHAASHIGKAQGIVTCLRATPYHGSRRRVFLPMDICMLHGVSQEDFLRKSQDRNVRDVVYDVASQAHLHLKHARSFHRSIPVKAFPAFLQTVALEDYLKKIQQVDFDLFHPSLQRKNTLLPLSLYIQSWRKRY", "length": 333 }, "evidence": [ { "id": "Q9SI77", "url": "https://omabrowser.org/oma/group/Q9SI77/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "D3ZN43-1", "protein_name": "NADH dehydrogenase (ubiquinone) complex I, assembly factor 6", "gene_name": "Ndufaf6", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MATSMLGSVPGPRPFGLAGLFRRRPPRDPWERVRRLPRLSAVRRSVAAASGPGIPDSHLYCLELLRKRDYESYLCSLLFPAECQRSASALRAFNVELAQVKDSVSEKTIGLMRMQFWRKAVEDMFCDNPPHQPVAMELWKAVKRHNLTKRWLLRIIDEREKNLDDKAYRSIRELETYAENTQSSLLYLTLEVLGVKDVHADHAASHIGKAQGIVTCLRATPYHSSRRQVFLPMDVCVQHGVSQEDFLRRNQDKNVRDVVYDIASQAHLHLKHARSFHSRVPAEAFPAFLQTVSLEDYLKKIQRVDFDIFHPSLQQKNTLLPLSLYIQSWRKRY", "length": 333 }, "evidence": [ { "id": "Q9SI77", "url": "https://omabrowser.org/oma/group/Q9SI77/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "F1RY58-1", "protein_name": "NADH dehydrogenase (ubiquinone) complex I, assembly factor 6", "gene_name": "NDUFAF6", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MAASMLGSAWGPLRLGLPGLCRRRPPGGLWARARRLPGSAGSGRSVAAASGSGASGTDRYCMELLRKRDYEGYLCSLLFPAESRSSAFALRAFNVELAQVKDSVSEKTIGLMRMQFWKKTVDDIYCDSPPHQPVAIELWKAVKRHNLTKRWLMKIIDEREKNLDDKAYRNIQELENYAENTQSSLLYLTLEILGVKDLHADHAASHIGKAQGIVTCLRATPYHGSRRRVFLPMDICMLHGVSQEDFLRKSQDKNVRDVVYDIASQAHLHLKHARSFHKSVPAKAFPAFLQTVALEDYLKKIQQVDFDIFHPSLQQKNTLLPLSVYIQSWRKRY", "length": 333 }, "evidence": [ { "id": "Q9SI77", "url": "https://omabrowser.org/oma/group/Q9SI77/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "Q330K2-1", "protein_name": "NADH dehydrogenase (ubiquinone) complex I, assembly factor 6", "gene_name": "NDUFAF6", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MAASAHGSVWGPLRLGIPGLCCRRPPLGLYARMRRLPGPEVSGRSVAAASGPGAWGTDHYCLELLRKRDYEGYLCSLLLPAESRSSVFALRAFNVELAQVKDSVSEKTIGLMRMQFWKKTVEDIYCDNPPHQPVAIELWKAVKRHNLTKRWLMKIVDEREKNLDDKAYRNIKELENYAENTQSSLLYLTLEILGIKDLHADHAASHIGKAQGIVTCLRATPYHGSRRKVFLPMDICMLHGVSQEDFLRRNQDKNVRDVIYDIASQAHLHLKHARSFHKTVPVKAFPAFLQTVSLEDFLKKIQRVDFDIFHPSLQQKNTLLPLYLYIQSWRKTY", "length": 333 }, "evidence": [ { "id": "Q9SI77", "url": "https://omabrowser.org/oma/group/Q9SI77/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q54E48-1", "protein_name": "NADH dehydrogenase (ubiquinone) complex I, assembly factor 6 homolog", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIRNSGRILFNSLKNSNVKLINRNVIINSNIRLFSTSTNNTIKESVEKKAETISNKDNIASPSSKSIDVSDLAGNADYNFVFERIKTCDKENYINSLLISDPIARRVAYAIRAFNIETVANDHSPKSEKISRLRLSFWKDAINNIYNGKVYDQPLTRVLAQVIKEKKLTKTWFIKILNRREKDNQQVQIKDMEELEQYADDIHSSLMLLTLEGLGVKGNHDVEHCASHLGKAIGIMVLIRGTVYHLASRKTYIPVSLTTKYGINVESLYRGDPQIEKLQNAIYEMASCAKLHLDKAKQFRGKIPHPATEAFLSVSVVEDFLERLRKADFNIFEFPNTQQHPLLLIKLYKNKFFKQF", "length": 356 }, "evidence": [ { "id": "Q9SI77", "url": "https://omabrowser.org/oma/group/Q9SI77/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q9VYS5-1", "protein_name": "NADH dehydrogenase (ubiquinone) complex I, assembly factor 6 homolog", "gene_name": "sicily", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MRRLVRNWNCRLLFNAKSGQEIVSHAGIHQEAKTNAIPREKKVIEADKNGYGAKHCMSLVEKYDYENYLCTLLLPRELRRAAFALRAFNVEVSRSVSGHQIEPQIAKMRLKFWHDSIDKCFEPDSQRSYVEDQPVLRELKHTVGSRKLNKVYLRRLVTARERPPTHAFESIRELEEYTEQTFSSLLLLLLEVGGVRDLNADHAASHLGKAQGIATLLRSIPLAGRQQAPCIPLEVLVLHGVSQERIIRSKSDDKGVEDCIFDVASAANTHLKLARQLHDKVPPQVRKIFLSAVATDAYLERLRRANFLLTHKSCVGRDTLLPARLFWKSLLNRF", "length": 334 }, "evidence": [ { "id": "Q9SI77", "url": "https://omabrowser.org/oma/group/Q9SI77/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "Q9SI77", "url": "https://www.uniprot.org/uniprotkb/Q9SI77" } ], "pmid": "" }, { "name": "mitochondrial inner membrane", "id": "GO:0005743", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005743", "evidence": [ { "database": 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"MAKGDDNVQRKKNKVTRKKMSRKNDTATVSARIAAIIAAKKRRKSGKRSMCQGMCFTLPTLEDPFNERQGKADITKKKKKKKKVKSREDKKPSPMSIEGVEKMDGPPKFLMLNLNEIESSFRKDITYSEQHDKSLFTSSWGIEFWKCYSSGNDILDTSGMSSTVEQIAWIVSTAADAIARREKDEVEEEEELLGNSPFLLYLVPSQSKASQVRSVCKALKGIGIHTVSLHQGAPLDHQISGLKSVEPEFIVATPERLLEIVTLKGVDISNVSLLVIDELGSLCSGGYLNAVKSIKQAISSKHQTIVFNNSFSASIIPAVQSFLGGSVNRVTVNESVASQGSCITQTVSVCASEEKKLQKFAKHLDSSSSKLIYIVTKEESFKKIMAILKLKGISVSTSSDSKLSEVKKSRKPVAHLIDFEQLDTTVMRDSETVLLPDFFPSIEIYTQILTSMARESAHGVLHSYITEKDAASYQAGPLVNVLENCGQNVPDRWRNMDVAMSD", "length": 502, "header": "tr|Q9SIB5-1|Q9SIB5_ARATH Isoform 1 of P-loop containing nucleoside triphosphate hydrolases superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SIB5-1" }, "locus": { "chromosome": "2", "start_pos": 12251784, "end_pos": 12254872, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT2G28600.1", "url": "https://www.ensemblgenomes.org/id/AT2G28600.1" }, { "database": "Ensembl Peptide", "id": "AT2G28600.1", "url": 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"https://www.uniprot.org/uniprotkb/Q9SID9", "locus": {} } ], "crossref": [ { "id": "AT2G22270", "url": "https://bar.utoronto.ca/thalemine/portal.do?externalids=AT2G22270", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "816760", "url": "https://www.ncbi.nlm.nih.gov/gene/816760", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR025131", "url": "https://www.ebi.ac.uk/interpro/entry/IPR025131", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT2G22270", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT2G22270", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "FCGEENS", "url": "https://omabrowser.org/oma/group/FCGEENS/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A1P8AYM0", "url": "https://www.orthodb.org/?gene=A0A1P8AYM0", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "Q9SID9", "url": "https://www.orthodb.org/?gene=Q9SID9", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR31132", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31132", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR31132:SF15", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31132:SF15", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF13266", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF13266", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "AT2G22270", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT2G22270", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "A0A1P8AYM0", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AYM0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A1P8AYM0-1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AYM0-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9SID9", "url": "https://www.uniprot.org/uniprotkb/Q9SID9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9SID9-1", "url": "https://www.uniprot.org/uniprotkb/Q9SID9-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MEEERNNPHHSTADLLSWSEIRRPDYSTAANRSNQPSDGMNDVLGGGGQITNAETKSLNTNVSHRKNCSGHKLKEMTGSDIFSDDGKYDPNHQTRIHYHQDQLSQISFSGEENATTPMNGKDDPNHQTRIHYHQDQRSQISFSGEENVTPKKPTTLNEAAKQKELSRTVETQADSKCKKKQISNTKNKAMSGHDIFASPESQPRRLFGGATQSEVKGNKNTEESAPRSSRASVKTSNGQSSNRLFSEEHVVKSSKKIHNQKSQFQGLTSNGIFKSDKIPPGYSEKMQSSAKKREMSGHNIFADGKSEYRDYYGGARRPPGGESSISLV", "length": 328, "header": "tr|Q9SID9-1|Q9SID9_ARATH Isoform 1 of Hematological/neurological-like protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=2 CANONICAL=Q9SID9-1" }, "isoforms": [ { "isoform_ac": "A0A1P8AYM0-1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AYM0/entry", "sequence": { "sequence": "MNDVLGGGGQITNAETKSLNTNVSHRKNCSGHKLKEMTGSDIFSDDGKYDPNHQTRIHYHQDQLSQISFSGEENATTPMNGKDDPNHQTRIHYHQDQRSQISFSGEENVTPKKPTTLNEAAKQKELSRTVETQADSKCKKKQISNTKNKAMSGHDIFASPESQPRRLFGGATQSEVKGNKNTEESAPRSSRASVKTSNGQSSNRLFSEEHVVKSSKKIHNQKSQFQGLTSNGIFKSDKIPPGYSEKMQSSAKKREMSGHNIFADGKSEYRDYYGGARRPPGGESSISLV", "length": 289, "header": "tr|A0A1P8AYM0-1|A0A1P8AYM0_ARATH Computationally mapped isoform of Hematological/neurological-like protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SID9-1" }, "locus": { "chromosome": "2", "start_pos": 9463903, "end_pos": 9465522, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT2G22270.2", "url": "https://www.ensemblgenomes.org/id/AT2G22270.2" }, { "database": "Ensembl Peptide", "id": "AT2G22270.2", "url": "https://www.ensemblgenomes.org/id/AT2G22270.2" } ] } }, { "isoform_ac": "Q9SID9-1", "url": "https://www.uniprot.org/uniprotkb/Q9SID9/entry", "sequence": { "sequence": "MEEERNNPHHSTADLLSWSEIRRPDYSTAANRSNQPSDGMNDVLGGGGQITNAETKSLNTNVSHRKNCSGHKLKEMTGSDIFSDDGKYDPNHQTRIHYHQDQLSQISFSGEENATTPMNGKDDPNHQTRIHYHQDQRSQISFSGEENVTPKKPTTLNEAAKQKELSRTVETQADSKCKKKQISNTKNKAMSGHDIFASPESQPRRLFGGATQSEVKGNKNTEESAPRSSRASVKTSNGQSSNRLFSEEHVVKSSKKIHNQKSQFQGLTSNGIFKSDKIPPGYSEKMQSSAKKREMSGHNIFADGKSEYRDYYGGARRPPGGESSISLV", "length": 328, "header": "tr|Q9SID9-1|Q9SID9_ARATH Isoform 1 of Hematological/neurological-like protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=2 CANONICAL=Q9SID9-1" }, "locus": { "chromosome": "2", "start_pos": 9463592, "end_pos": 9465520, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT2G22270.1", "url": "https://www.ensemblgenomes.org/id/AT2G22270.1" }, { "database": "Ensembl Peptide", "id": "AT2G22270.1", "url": "https://www.ensemblgenomes.org/id/AT2G22270.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 2 of the plant 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"database": "UniProtKB", "id": "Q9SID9", "url": "https://www.uniprot.org/uniprotkb/Q9SID9" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT2G22270", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT2G22270", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q9SID9", "url": "https://www.uniprot.org/uniprotkb/Q9SID9" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 113, "end_pos": 115, "annotation": "n_glycosylation_sequon" }, { "start_pos": 147, "end_pos": 149, "annotation": "n_glycosylation_sequon" }, { "start_pos": 31, "end_pos": 33, "annotation": "n_glycosylation_sequon" }, { "start_pos": 61, "end_pos": 63, "annotation": "n_glycosylation_sequon" }, { "start_pos": 67, "end_pos": 69, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "Q9SID9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SID9" }, { "id": "PF13266", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF13266" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "DUF4057", "eco_id": "ECO_0000259", "start_pos": 108, "end_pos": 326, "start_aa": "Phe", "end_aa": "Ser", "glycosite_overlap": [] } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], 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CANONICAL=Q9SIH3-1" }, "locus": { "chromosome": "2", "start_pos": 15161702, "end_pos": 15162790, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT2G36110.1", "url": "https://www.ensemblgenomes.org/id/AT2G36110.1" }, { "database": "Ensembl Peptide", "id": "AT2G36110.1", "url": "https://www.ensemblgenomes.org/id/AT2G36110.1" } ] } } ], "glycosylation": [], "phosphorylation": [ { "start_pos": 43, "end_pos": 43, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SIH3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SIH3" } ], "site_lbl": "Ser43" } ], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "1999", "authors": "Lin X, Kaul S, Rounsley S, Shea T P, Benito M I, Town C D, Fujii C Y, Mason T, Bowman C L, Barnstead M, Feldblyum T V, Buell C R, 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"https://www.ebi.ac.uk/interpro/entry/pfam/PF01556", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_179646", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_179646", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT2G20560", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT2G20560", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9SIL3", "url": "https://www.uniprot.org/uniprotkb/Q9SIL3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9SIL3-1", "url": "https://www.uniprot.org/uniprotkb/Q9SIL3-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MGVDYYKVLQVDRSASDDDLKKAYRKLAMKWHPDKNPNNKKDAEAMFKQISEAYEVLSDPQKKAVYDQYGEEGLKGNVPPPDAGGATYFSTGDGPTSFRFNPRNADDIFAEFFGFSSPFGGGRGGTRFSSSMFGDNMFASFGEGGGGGGGSMHHGGARKAAPIENKLPCSLEDLYKGTTKKMRISREIADVSGKTMQVEEILTIDVKPGWKKGTKITFPEKGNEQPGVIPADLVFIIDEKPHPVFTREGNDLIVTQKISLVEALTGYTVNLTTLDGRRLTIPVTNVVHPEYEEVVPKEGMPLQKDQTKRGNLRIKFNIKFPTRLTSEQKTGVKKLLG", "length": 337, "header": "tr|Q9SIL3-1|Q9SIL3_ARATH Isoform 1 of DNAJ heat shock family protein OS=Arabidopsis thaliana OX=3702 GN=DNAJ PE=1 SV=1 CANONICAL=Q9SIL3-1" }, "isoforms": [ { "isoform_ac": "Q9SIL3-1", "url": "https://www.uniprot.org/uniprotkb/Q9SIL3/entry", "sequence": { "sequence": "MGVDYYKVLQVDRSASDDDLKKAYRKLAMKWHPDKNPNNKKDAEAMFKQISEAYEVLSDPQKKAVYDQYGEEGLKGNVPPPDAGGATYFSTGDGPTSFRFNPRNADDIFAEFFGFSSPFGGGRGGTRFSSSMFGDNMFASFGEGGGGGGGSMHHGGARKAAPIENKLPCSLEDLYKGTTKKMRISREIADVSGKTMQVEEILTIDVKPGWKKGTKITFPEKGNEQPGVIPADLVFIIDEKPHPVFTREGNDLIVTQKISLVEALTGYTVNLTTLDGRRLTIPVTNVVHPEYEEVVPKEGMPLQKDQTKRGNLRIKFNIKFPTRLTSEQKTGVKKLLG", "length": 337, "header": "tr|Q9SIL3-1|Q9SIL3_ARATH Isoform 1 of DNAJ heat shock family protein OS=Arabidopsis thaliana OX=3702 GN=DNAJ PE=1 SV=1 CANONICAL=Q9SIL3-1" }, "locus": { "chromosome": "2", "start_pos": 8848130, "end_pos": 8850111, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT2G20560.1", "url": "https://www.ensemblgenomes.org/id/AT2G20560.1" }, { "database": "Ensembl Peptide", "id": "AT2G20560.1", "url": "https://www.ensemblgenomes.org/id/AT2G20560.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "1999", "authors": "Lin X, Kaul S, Rounsley S, Shea T P, Benito M I, Town C D, Fujii C Y, Mason T, Bowman C L, Barnstead M, Feldblyum T V, Buell C R, Ketchum K A, Lee J, Ronning C M, Koo H L, Moffat K S, Cronin L A, Shen M, Pai G, Van Aken S, Umayam L, Tallon L J, Gill J E, Adams M D, Carrera A J, Creasy T H, Goodman H M, Somerville C R, Copenhaver G P, Preuss D, Nierman W C, White O, Eisen J A, Salzberg S L, Fraser C M, Venter J C", "evidence": [ { "database": "UniProtKB", "id": "Q9SIL3", "url": "https://www.uniprot.org/uniprotkb/Q9SIL3" } ], "reference": [ { "type": "PubMed", "id": "10617197", "url": "https://glygen.org/publication/PubMed/10617197" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9SIL3", "url": "https://www.uniprot.org/uniprotkb/Q9SIL3" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT2G20560", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT2G20560", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "Q9SIL3", "url": "https://www.uniprot.org/uniprotkb/Q9SIL3" } ], "pmid": "" }, { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "Q9SIL3", "url": "https://www.uniprot.org/uniprotkb/Q9SIL3" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "unfolded protein binding", "id": "GO:0051082", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0051082", "evidence": [ { "database": "UniProtKB", "id": "Q9SIL3", "url": "https://www.uniprot.org/uniprotkb/Q9SIL3" } ], "pmid": "" }, { "name": "protein-folding chaperone binding", "id": "GO:0051087", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0051087", "evidence": [ { "database": "UniProtKB", "id": "Q9SIL3", "url": "https://www.uniprot.org/uniprotkb/Q9SIL3" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "protein folding", "id": "GO:0006457", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006457", "evidence": [ { "database": "UniProtKB", "id": "Q9SIL3", "url": "https://www.uniprot.org/uniprotkb/Q9SIL3" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 270, "end_pos": 272, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "Q9SIL3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SIL3" }, { "id": "PS50076", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50076" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "J", "eco_id": "ECO_0000259", "start_pos": 4, "end_pos": 70, "start_aa": "Asp", "end_aa": "Gly", "glycosite_overlap": [] } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 270, "end_pos": 272 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { 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GN= PE=1 SV=1 CANONICAL=Q9SIL4-1" }, "locus": { "chromosome": "2", "start_pos": 8845802, "end_pos": 8847311, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT2G20550.2", "url": "https://www.ensemblgenomes.org/id/AT2G20550.2" }, { "database": "Ensembl Peptide", "id": "AT2G20550.2", "url": "https://www.ensemblgenomes.org/id/AT2G20550.2" } ] } } ], "glycosylation": [], "phosphorylation": [ { "start_pos": 40, "end_pos": 40, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SIL4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SIL4" }, { "database": "PubMed", "id": "23328941", "url": "https://glygen.org/publication/PubMed/23328941" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" } ], "site_lbl": "Ser40" }, { "start_pos": 41, "end_pos": 41, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SIL4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SIL4" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" }, { "database": "PubMed", "id": "23328941", "url": "https://glygen.org/publication/PubMed/23328941" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "26091701", "url": "https://glygen.org/publication/PubMed/26091701" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ], "site_lbl": "Ser41" }, { "start_pos": 79, "end_pos": 79, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SIL4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SIL4" }, { "database": "PubMed", "id": "22438062", "url": "https://glygen.org/publication/PubMed/22438062" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" }, { "database": "PubMed", "id": "24601666", "url": "https://glygen.org/publication/PubMed/24601666" }, { "database": "PubMed", "id": "29167316", "url": "https://glygen.org/publication/PubMed/29167316" } ], "site_lbl": "Ser79" }, { "start_pos": 81, "end_pos": 81, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SIL4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SIL4" }, { "database": "PubMed", "id": "29167316", "url": "https://glygen.org/publication/PubMed/29167316" } ], "site_lbl": "Ser81" } ], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "1999", "authors": "Lin X, Kaul S, Rounsley S, Shea T P, Benito M I, Town C D, Fujii C Y, Mason T, Bowman C L, Barnstead M, Feldblyum T V, Buell C R, Ketchum K A, Lee J, Ronning C M, Koo H L, Moffat K S, Cronin L A, Shen M, Pai G, Van Aken S, Umayam L, Tallon L J, Gill J E, Adams M D, Carrera A J, Creasy T H, Goodman H M, Somerville C R, Copenhaver G P, Preuss D, Nierman W C, White O, Eisen J A, Salzberg S L, Fraser C M, Venter J C", "evidence": [ { "database": "UniProtKB", "id": "Q9SIL4", "url": "https://www.uniprot.org/uniprotkb/Q9SIL4" } ], "reference": [ { "type": "PubMed", "id": "10617197", "url": "https://glygen.org/publication/PubMed/10617197" } ] }, { "title": "Phosphoproteomic analysis of nuclei-enriched fractions from Arabidopsis thaliana.", "journal": "J. Proteomics", "date": "2009", "authors": "Jones Alexandra M E, MacLean Daniel, Studholme David J, Serna-Sanz Antonio, Andreasson Erik, Rathjen John P, Peck Scott C", "evidence": [ { "database": "UniProtKB", "id": "Q9SIL4", "url": "https://www.uniprot.org/uniprotkb/Q9SIL4" } ], "reference": [ { "type": "PubMed", "id": "19245862", "url": "https://glygen.org/publication/PubMed/19245862" } ] }, { "title": "Large-scale comparative phosphoproteomics identifies conserved phosphorylation sites in plants.", "journal": "Plant physiology", "date": "2010-07", "authors": "Nakagami Hirofumi, Sugiyama Naoyuki, Mochida Keiichi, Daudi Arsalan, Yoshida Yuko, Toyoda Tetsuro, Tomita Masaru, Ishihama Yasushi, Shirasu Ken", "evidence": [ { "database": "iPTMnet", "id": "Q9SIL4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SIL4" } ], "reference": [ { "type": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" } ] }, { "title": "Quantitative phosphoproteome profiling of iron-deficient Arabidopsis roots.", "journal": "Plant physiology", "date": "2012-05", "authors": "Lan Ping, Li Wenfeng, Wen Tuan-Nan, Schmidt Wolfgang", "evidence": [ { "database": "iPTMnet", "id": "Q9SIL4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SIL4" } ], "reference": [ { "type": "PubMed", "id": "22438062", "url": "https://glygen.org/publication/PubMed/22438062" } ] }, { "title": "Quantitative phosphoproteomics after auxin-stimulated lateral root induction identifies an SNX1 protein phosphorylation site required for growth.", "journal": "Molecular & cellular proteomics : MCP", "date": "2013-05", "authors": "Zhang Hongtao, Zhou Houjiang, Berke Lidija, Heck Albert J R, Mohammed Shabaz, Scheres Ben, Menke Frank L H", "evidence": [ { "database": "iPTMnet", "id": "Q9SIL4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SIL4" } ], "reference": [ { "type": "PubMed", "id": "23328941", "url": "https://glygen.org/publication/PubMed/23328941" } ] }, { "title": "Genetics and phosphoproteomics reveal a protein phosphorylation network in the abscisic acid signaling pathway in Arabidopsis thaliana.", "journal": "Science signaling", "date": "2013-04-09", "authors": "Umezawa Taishi, Sugiyama Naoyuki, Takahashi Fuminori, Anderson Jeffrey C, Ishihama Yasushi, Peck Scott C, Shinozaki Kazuo", "evidence": [ { "database": "iPTMnet", "id": "Q9SIL4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SIL4" } ], "reference": [ { "type": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" } ] }, { "title": "Quantitative phosphoproteomics identifies SnRK2 protein kinase substrates and reveals the effectors of abscisic acid action.", "journal": "Proceedings of the National Academy of Sciences of the United States of America", "date": "2013-07-02", "authors": "Wang Pengcheng, Xue Liang, Batelli Giorgia, Lee Shinyoung, Hou Yueh-Ju, Van Oosten Michael J, Zhang Huiming, Tao W Andy, Zhu Jian-Kang", "evidence": [ { "database": "iPTMnet", "id": "Q9SIL4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SIL4" } ], "reference": [ { "type": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" } ] }, { "title": "Identification of novel PAMP-triggered phosphorylation and dephosphorylation events in Arabidopsis thaliana by quantitative phosphoproteomic analysis.", "journal": "Journal of proteome research", "date": "2014-04-04", "authors": "Rayapuram Naganand, Bonhomme Ludovic, Bigeard Jean, Haddadou Kahina, Przybylski C\u00e9dric, Hirt Heribert, Pflieger Delphine", "evidence": [ { "database": "iPTMnet", "id": "Q9SIL4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SIL4" } ], "reference": [ { "type": "PubMed", "id": "24601666", "url": "https://glygen.org/publication/PubMed/24601666" } ] }, { "title": "Quantitative Circadian Phosphoproteomic Analysis of Arabidopsis Reveals Extensive Clock Control of Key Components in Physiological, Metabolic, and Signaling Pathways.", "journal": "Molecular & cellular proteomics : MCP", "date": "2015-08", "authors": "Choudhary Mani Kant, Nomura Yuko, Wang Lei, Nakagami Hirofumi, Somers David E", "evidence": [ { "database": "iPTMnet", "id": "Q9SIL4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SIL4" } ], "reference": [ { "type": "PubMed", "id": "26091701", "url": "https://glygen.org/publication/PubMed/26091701" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9SIL4", "url": "https://www.uniprot.org/uniprotkb/Q9SIL4" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] }, { "title": "Quantitative Phosphoproteomic Analysis Reveals Shared and Specific Targets of Arabidopsis Mitogen-Activated Protein Kinases (MAPKs) MPK3, MPK4, and MPK6.", "journal": "Molecular & cellular proteomics : MCP", "date": "2018-01", "authors": "Rayapuram Naganand, Bigeard Jean, Alhoraibi Hanna, Bonhomme Ludovic, Hesse Anne-Marie, Vinh Jo\u00eblle, Hirt Heribert, Pflieger Delphine", "evidence": [ { "database": "iPTMnet", "id": "Q9SIL4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SIL4" } ], "reference": [ { "type": "PubMed", "id": "29167316", "url": "https://glygen.org/publication/PubMed/29167316" } ] }, { "title": "Capturing the phosphorylation and protein interaction landscape of the plant TOR kinase.", "journal": "Nature plants", "date": "2019-03", "authors": "Van Leene Jelle, Han Chao, Gadeyne Astrid, Eeckhout Dominique, Matthijs Caroline, Cannoot Bernard, De Winne Nancy, Persiau Geert, Van De Slijke Eveline, Van de Cotte Brigitte, Stes Elisabeth, Van Bel Michiel, Storme Veronique, Impens Francis, Gevaert Kris, Vandepoele Klaas, De Smet Ive, De Jaeger Geert", "evidence": [ { "database": "iPTMnet", "id": "Q9SIL4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SIL4" } ], "reference": [ { "type": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ], "pathway": [ { "id": "ath:AT2G20550", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT2G20550", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "Q9SIL4", "url": "https://www.uniprot.org/uniprotkb/Q9SIL4" } ], "pmid": "" }, { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "Q9SIL4", "url": 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"PTHR34775:SF4", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR34775:SF4", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "AT2G16270", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT2G16270", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9SIX2", "url": "https://www.uniprot.org/uniprotkb/Q9SIX2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9SIX2-1", "url": "https://www.uniprot.org/uniprotkb/Q9SIX2-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": 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"http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31496:SF3", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00249", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00249", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "AT2G40260", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT2G40260", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "A0A1P8AZW6", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AZW6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A1P8AZW6-1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AZW6-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9SIZ5", "url": "https://www.uniprot.org/uniprotkb/Q9SIZ5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9SIZ5-1", "url": "https://www.uniprot.org/uniprotkb/Q9SIZ5-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], 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"MNVKGLSIAHVKSHLQMYRSKKTDEPNEGDQGFSFEHGAGYTYNLSQLPMLQSFDQRPSSSLGYGGGSWTDHRRQIYRSPWRGLTTRENTRTRQTMFSSQPGERYHGVSNSILNDKNKTISFRINSHEGVHDNNGVAGAVPRIHRSFLEGMKTFNKSWGQSLSSNLKSSTATIPQDHIATTLNSYQWENAGVAEGSENVLKRKRLLFSDDCNKSDQDLDLSLSLKVPRTHDNLGECLLEDEVKEHDDHQDIKSLSLSLSSSGSSKLDRTIRKEDQTDHKKRKISVLASPLDLTL", "length": 294, "header": "tr|A0A1P8AZW6-1|A0A1P8AZW6_ARATH Computationally mapped isoform of Homeodomain-like superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9SIZ5-1" }, "locus": { "chromosome": "2", "start_pos": 16816530, "end_pos": 16818730, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT2G40260.2", "url": "https://www.ensemblgenomes.org/id/AT2G40260.2" }, { "database": "Ensembl Peptide", "id": "AT2G40260.2", "url": "https://www.ensemblgenomes.org/id/AT2G40260.2" } ] } }, { "isoform_ac": "Q9SIZ5-1", "url": "https://www.uniprot.org/uniprotkb/Q9SIZ5/entry", "sequence": { "sequence": "MRSSSQNSENSKTCLSNNIKATTKNEEDKDEEDDEEGEEDEEERSGDQSPSSNSYEEESGSHHHDQNKKNGGSVRPYNRSKTPRLRWTPELHICFLQAVERLGGPDRATPKLVLQLMNVKGLSIAHVKSHLQMYRSKKTDEPNEGDQGFSFEHGAGYTYNLSQLPMLQSFDQRPSSSLGYGGGSWTDHRRQIYRSPWRGLTTRENTRTRQTMFSSQPGERYHGVSNSILNDKNKTISFRINSHEGVHDNNGVAGAVPRIHRSFLEGMKTFNKSWGQSLSSNLKSSTATIPQDHIATTLNSYQWENAGVAEGSENVLKRKRLLFSDDCNKSDQDLDLSLSLKVPRTHDNLGECLLEDEVKEHDDHQDIKSLSLSLSSSGSSKLDRTIRKEDQTDHKKRKISVLASPLDLTL", "length": 410, "header": "tr|Q9SIZ5-1|Q9SIZ5_ARATH Isoform 1 of Homeodomain-like superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9SIZ5-1" }, "locus": { "chromosome": "2", "start_pos": 16816530, "end_pos": 16818730, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT2G40260.1", "url": "https://www.ensemblgenomes.org/id/AT2G40260.1" }, { "database": "Ensembl Peptide", "id": "AT2G40260.1", "url": "https://www.ensemblgenomes.org/id/AT2G40260.1" } ] } } ], "glycosylation": [], "phosphorylation": [ { "start_pos": 339, "end_pos": 339, 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"Q9SIZ5", "url": "https://www.uniprot.org/uniprotkb/Q9SIZ5" } ], "reference": [ { "type": "PubMed", "id": "10617197", "url": "https://glygen.org/publication/PubMed/10617197" } ] }, { "title": "Quantitative Circadian Phosphoproteomic Analysis of Arabidopsis Reveals Extensive Clock Control of Key Components in Physiological, Metabolic, and Signaling Pathways.", "journal": "Molecular & cellular proteomics : MCP", "date": "2015-08", "authors": "Choudhary Mani Kant, Nomura Yuko, Wang Lei, Nakagami Hirofumi, Somers David E", "evidence": [ { "database": "iPTMnet", "id": "Q9SIZ5", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SIZ5" } ], "reference": [ { "type": "PubMed", "id": "26091701", "url": "https://glygen.org/publication/PubMed/26091701" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9SIZ5", "url": "https://www.uniprot.org/uniprotkb/Q9SIZ5" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT2G40260", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT2G40260", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 3, "go_terms": [ { "name": "DNA binding", "id": "GO:0003677", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003677", "evidence": [ { "database": "UniProtKB", "id": "Q9SIZ5", "url": "https://www.uniprot.org/uniprotkb/Q9SIZ5" } ], "pmid": "" }, { "name": "DNA-binding transcription factor activity", "id": "GO:0003700", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003700", "evidence": [ { "database": "UniProtKB", "id": "Q9SIZ5", "url": "https://www.uniprot.org/uniprotkb/Q9SIZ5" } ], "pmid": 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"https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd10017", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "816728", "url": "https://www.ncbi.nlm.nih.gov/gene/816728", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR003340", "url": "https://www.ebi.ac.uk/interpro/entry/IPR003340", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR013187", "url": "https://www.ebi.ac.uk/interpro/entry/IPR013187", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR015300", "url": "https://www.ebi.ac.uk/interpro/entry/IPR015300", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR051442", "url": "https://www.ebi.ac.uk/interpro/entry/IPR051442", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT2G21920", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT2G21920", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "PTHR34269", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR34269", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR34269:SF15", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR34269:SF15", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF08268", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF08268", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PR:Q9SJ07", "url": "https://proconsortium.org/cgi-bin/entry_pro?id=PR:Q9SJ07", "database": "PRO", "categories": [ "Protein" ] }, { "id": "AT2G21920", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT2G21920", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9SJ07", "url": "https://www.uniprot.org/uniprotkb/Q9SJ07", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9SJ07-1", "url": "https://www.uniprot.org/uniprotkb/Q9SJ07-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MSFDVRSEKIDLIKGPELPDYNMFMSQKFTSYEGKLAILLTGNGDCSFYMWILEDAAKHEWSKKAYVVPDFFPLDPFVLLMQRANENDIVRTFHYDDRVGTSDAIVESTPASPPRHIMFSVIIRKDSPLRNLRGAKSIFKVSFTIILKTFIVKLIMMKDFQLDGDMIISKTLSRTDVDHHGRLFLPKNQVLSVLKKMRNVTKESLRKGIELEVVDIIENDSYSVILKSRNTTNDFVLASGWSIMKHSLDLQEGDDIKLFWDYLNYKFIILNFEYNLIP", "length": 278, "header": "sp|Q9SJ07-1|Y2192_ARATH Isoform 1 of Putative B3 domain-containing protein At2g21920 OS=Arabidopsis thaliana OX=3702 GN= PE=3 SV=1 CANONICAL=Q9SJ07-1" }, "isoforms": [ { "isoform_ac": "Q9SJ07-1", "url": "https://www.uniprot.org/uniprotkb/Q9SJ07/entry#Q9SJ07-1", "sequence": { "sequence": "MSFDVRSEKIDLIKGPELPDYNMFMSQKFTSYEGKLAILLTGNGDCSFYMWILEDAAKHEWSKKAYVVPDFFPLDPFVLLMQRANENDIVRTFHYDDRVGTSDAIVESTPASPPRHIMFSVIIRKDSPLRNLRGAKSIFKVSFTIILKTFIVKLIMMKDFQLDGDMIISKTLSRTDVDHHGRLFLPKNQVLSVLKKMRNVTKESLRKGIELEVVDIIENDSYSVILKSRNTTNDFVLASGWSIMKHSLDLQEGDDIKLFWDYLNYKFIILNFEYNLIP", "length": 278, "header": "sp|Q9SJ07-1|Y2192_ARATH Isoform 1 of Putative B3 domain-containing protein At2g21920 OS=Arabidopsis thaliana OX=3702 GN= PE=3 SV=1 CANONICAL=Q9SJ07-1" }, "locus": { "chromosome": "2", "start_pos": 9343410, "end_pos": 9347159, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT2G21920.1", "url": "https://www.ensemblgenomes.org/id/AT2G21920.1" }, { "database": "Ensembl Peptide", "id": "AT2G21920.1", "url": "https://www.ensemblgenomes.org/id/AT2G21920.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "1999", "authors": "Lin X, Kaul S, Rounsley S, Shea T P, Benito M I, Town C D, Fujii C Y, Mason T, Bowman C L, Barnstead M, Feldblyum T V, Buell C R, Ketchum K A, Lee J, Ronning C M, Koo H L, Moffat K S, Cronin L A, Shen M, Pai G, Van Aken S, Umayam L, Tallon L J, Gill J E, Adams M D, Carrera A J, Creasy T H, Goodman H M, Somerville C R, Copenhaver G P, Preuss D, Nierman W C, White O, Eisen J A, Salzberg S L, Fraser C M, Venter J C", "evidence": [ { "database": "UniProtKB", "id": "Q9SJ07", "url": "https://www.uniprot.org/uniprotkb/Q9SJ07" } ], "reference": [ { "type": "PubMed", "id": "10617197", "url": "https://glygen.org/publication/PubMed/10617197" } ] }, { "title": "The plant B3 superfamily.", "journal": "Trends Plant Sci.", "date": "2008", "authors": "Swaminathan Kankshita, Peterson Kevin, Jack Thomas", "evidence": [ { "database": "UniProtKB", "id": "Q9SJ07", "url": "https://www.uniprot.org/uniprotkb/Q9SJ07" } ], "reference": [ { "type": "PubMed", "id": "18986826", "url": "https://glygen.org/publication/PubMed/18986826" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9SJ07", "url": "https://www.uniprot.org/uniprotkb/Q9SJ07" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT2G21920", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT2G21920", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "DNA binding", "id": "GO:0003677", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003677", "evidence": [ { "database": "UniProtKB", "id": "Q9SJ07", "url": "https://www.uniprot.org/uniprotkb/Q9SJ07" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q9SJ07", "url": "https://www.uniprot.org/uniprotkb/Q9SJ07" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "DNA-templated transcription", "id": "GO:0006351", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006351", "evidence": [ { "database": "UniProtKB", "id": "Q9SJ07", "url": "https://www.uniprot.org/uniprotkb/Q9SJ07" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 199, "end_pos": 201, "annotation": "n_glycosylation_sequon" }, { "start_pos": 219, "end_pos": 221, "annotation": "n_glycosylation_sequon" }, { "start_pos": 230, "end_pos": 232, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], 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], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT2G04830", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT2G04830", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": {}, "pro_annotation": [], "site_annotation": [ { "start_pos": 89, "end_pos": 91, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "Q9SJ76", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SJ76" }, { "id": "PF03478", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF03478" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "KIB1-4 beta-propeller", "eco_id": "ECO_0000259", "start_pos": 1, "end_pos": 72, "start_aa": "Met", "end_aa": 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"Q9SJ78", "url": "https://www.uniprot.org/uniprotkb/Q9SJ78" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT2G04810", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT2G04810", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q9SJ78", "url": "https://www.uniprot.org/uniprotkb/Q9SJ78" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-Q9SJ78-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 397, "overlap": "1.0", "method": "AlphaFold", "type": 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Fujii C Y, Mason T, Bowman C L, Barnstead M, Feldblyum T V, Buell C R, Ketchum K A, Lee J, Ronning C M, Koo H L, Moffat K S, Cronin L A, Shen M, Pai G, Van Aken S, Umayam L, Tallon L J, Gill J E, Adams M D, Carrera A J, Creasy T H, Goodman H M, Somerville C R, Copenhaver G P, Preuss D, Nierman W C, White O, Eisen J A, Salzberg S L, Fraser C M, Venter J C", "evidence": [ { "database": "UniProtKB", "id": "Q9SJL5", "url": "https://www.uniprot.org/uniprotkb/Q9SJL5" } ], "reference": [ { "type": "PubMed", "id": "10617197", "url": "https://glygen.org/publication/PubMed/10617197" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9SJL5", "url": "https://www.uniprot.org/uniprotkb/Q9SJL5" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT2G36920", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT2G36920", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q9SJL5", "url": "https://www.uniprot.org/uniprotkb/Q9SJL5" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 125, "end_pos": 127, "annotation": "n_glycosylation_sequon" }, { "start_pos": 135, "end_pos": 137, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], 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{ "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { 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15451520, "end_pos": 15453819, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "AT2G36840", "url": "https://www.ensemblgenomes.org/id/AT2G36840" } ] } } ], "crossref": [ { "id": "Q9SJM1", "url": "https://alphafold.ebi.ac.uk/entry/Q9SJM1", "database": "AlphaFoldDB", "categories": [] }, { "id": "AT2G36840", "url": "https://bar.utoronto.ca/thalemine/portal.do?externalids=AT2G36840", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "cd04898", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd04898", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "818257", "url": "https://www.ncbi.nlm.nih.gov/gene/818257", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "Q9SJM1", "url": "https://www.ebi.ac.uk/intact/interactors/id:Q9SJM1*", "database": "IntAct", "categories": [ "Other" ] }, { "id": "IPR002912", "url": "https://www.ebi.ac.uk/interpro/entry/IPR002912", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR040217", "url": "https://www.ebi.ac.uk/interpro/entry/IPR040217", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR045865", "url": "https://www.ebi.ac.uk/interpro/entry/IPR045865", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR056805", "url": "https://www.ebi.ac.uk/interpro/entry/IPR056805", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR056816", "url": "https://www.ebi.ac.uk/interpro/entry/IPR056816", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT2G36840", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT2G36840", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "QIGDREW", "url": "https://omabrowser.org/oma/group/QIGDREW/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "Q9SJM1", "url": "https://www.orthodb.org/?gene=Q9SJM1", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR31096", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31096", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR31096:SF23", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31096:SF23", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF01842", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF01842", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF24914", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF24914", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF24926", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF24926", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF24931", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF24931", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PR:Q9SJM1", "url": "https://proconsortium.org/cgi-bin/entry_pro?id=PR:Q9SJM1", "database": "PRO", "categories": [ "Protein" ] }, { "id": "NP_030235", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_030235", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT2G36840", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT2G36840", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9SJM1", "url": "https://www.uniprot.org/uniprotkb/Q9SJM1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9SJM1-1", "url": "https://www.uniprot.org/uniprotkb/Q9SJM1-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MGILSDDVVIISQSEKEGDPSVITINCPDKTGLGCDLCRILLFFGLNIVRGDVSTDGKWCYLVFWVIGKPNTRWNLLKMRLVEASPSFSWAFGISRCYLSDSESQPPKLPDLFLLKLACSDRTGLLYDVTEVLYKLEINIEKVKISTTPDGKVMDLFFVTDTRELLGTVKRRNEVYEYLRDAIGDSMISYDIELVGPEITACSTSSSVAETLFSSDVSGEHSSGLHTSSNVSIAVDNSLSSAHTLIHITCQDHKGLLYDIMRTFKDFNIQISYGRFTIKLGKNCEIDLFIVQSDGRKILDSSKLNALITRLRAELQQPLRVVMMNRGPDTELLVTNPVELSGKGRPQVFHDIALALKKIDTCIFSAEIGRHVTGDREWEVYKVLINEEDSLPIPRSKIEEEVWKTLMGWE", "length": 410, "header": "sp|Q9SJM1-1|ACR10_ARATH Isoform 1 of ACT domain-containing protein ACR10 OS=Arabidopsis thaliana OX=3702 GN=ACR10 PE=2 SV=1 CANONICAL=Q9SJM1-1" }, "isoforms": [ { "isoform_ac": "Q9SJM1-1", "url": "https://www.uniprot.org/uniprotkb/Q9SJM1/entry#Q9SJM1-1", "sequence": { "sequence": "MGILSDDVVIISQSEKEGDPSVITINCPDKTGLGCDLCRILLFFGLNIVRGDVSTDGKWCYLVFWVIGKPNTRWNLLKMRLVEASPSFSWAFGISRCYLSDSESQPPKLPDLFLLKLACSDRTGLLYDVTEVLYKLEINIEKVKISTTPDGKVMDLFFVTDTRELLGTVKRRNEVYEYLRDAIGDSMISYDIELVGPEITACSTSSSVAETLFSSDVSGEHSSGLHTSSNVSIAVDNSLSSAHTLIHITCQDHKGLLYDIMRTFKDFNIQISYGRFTIKLGKNCEIDLFIVQSDGRKILDSSKLNALITRLRAELQQPLRVVMMNRGPDTELLVTNPVELSGKGRPQVFHDIALALKKIDTCIFSAEIGRHVTGDREWEVYKVLINEEDSLPIPRSKIEEEVWKTLMGWE", "length": 410, "header": "sp|Q9SJM1-1|ACR10_ARATH Isoform 1 of ACT domain-containing protein ACR10 OS=Arabidopsis thaliana OX=3702 GN=ACR10 PE=2 SV=1 CANONICAL=Q9SJM1-1" }, "locus": { "chromosome": "2", "start_pos": 15451520, "end_pos": 15453819, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT2G36840.1", "url": "https://www.ensemblgenomes.org/id/AT2G36840.1" }, { "database": "Ensembl Peptide", "id": "AT2G36840.1", "url": "https://www.ensemblgenomes.org/id/AT2G36840.1" } ] } } ], "glycosylation": [], "phosphorylation": [ { "start_pos": 168, "end_pos": 168, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Thr", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SJM1", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SJM1" }, { "database": "PubMed", "id": "22060019", "url": "https://glygen.org/publication/PubMed/22060019" } ], "site_lbl": "Thr168" } ], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "1999", "authors": "Lin X, Kaul S, Rounsley S, Shea T P, Benito M I, Town C D, Fujii C Y, Mason T, Bowman C L, Barnstead M, Feldblyum T V, Buell C R, Ketchum K A, Lee J, Ronning C M, Koo H L, Moffat K S, Cronin L A, Shen M, Pai G, Van Aken S, Umayam L, Tallon L J, Gill J E, Adams M D, Carrera A J, Creasy T H, Goodman H M, Somerville C R, Copenhaver G P, Preuss D, Nierman W C, White O, Eisen J A, Salzberg S L, Fraser C M, Venter J C", "evidence": [ { "database": "UniProtKB", "id": "Q9SJM1", "url": "https://www.uniprot.org/uniprotkb/Q9SJM1" } ], "reference": [ { "type": "PubMed", "id": "10617197", "url": "https://glygen.org/publication/PubMed/10617197" } ] }, { "title": "Empirical analysis of transcriptional activity in the Arabidopsis genome.", "journal": "Science", "date": "2003", "authors": "Yamada Kayoko, Lim Jun, Dale Joseph M, Chen Huaming, Shinn Paul, Palm Curtis J, Southwick Audrey M, Wu Hank C, Kim Christopher, Nguyen Michelle, Pham Paul, Cheuk Rosa, Karlin-Newmann George, Liu Shirley X, Lam Bao, Sakano Hitomi, Wu Troy, Yu Guixia, Miranda Molly, Quach Hong L, Tripp Matthew, Chang Charlie H, Lee Jeong M, Toriumi Mitsue, Chan Marie M H, Tang Carolyn C, Onodera Courtney S, Deng Justine M, Akiyama Kenji, Ansari Yasser, Arakawa Takahiro, Banh Jenny, Banno Fumika, Bowser Leah, Brooks Shelise, Carninci Piero, Chao Qimin, Choy Nathan, Enju Akiko, Goldsmith Andrew D, Gurjal Mani, Hansen Nancy F, Hayashizaki Yoshihide, Johnson-Hopson Chanda, Hsuan Vickie W, Iida Kei, Karnes Meagan, Khan Shehnaz, Koesema Eric, Ishida Junko, Jiang Paul X, Jones Ted, Kawai Jun, Kamiya Asako, Meyers Cristina, Nakajima Maiko, Narusaka Mari, Seki Motoaki, Sakurai Tetsuya, Satou Masakazu, Tamse Racquel, Vaysberg Maria, Wallender Erika K, Wong Cecilia, Yamamura Yuki, Yuan Shiaulou, Shinozaki Kazuo, Davis Ronald W, Theologis Athanasios, Ecker Joseph R", "evidence": [ { "database": "UniProtKB", "id": "Q9SJM1", "url": "https://www.uniprot.org/uniprotkb/Q9SJM1" } ], "reference": [ { "type": "PubMed", "id": "14593172", "url": "https://glygen.org/publication/PubMed/14593172" } ] }, { "title": "The ACR11 encodes a novel type of chloroplastic ACT domain repeat protein that is coordinately expressed with GLN2 in Arabidopsis.", "journal": "BMC plant biology", "date": "2011-08-24", "authors": "Sung Tzu-Ying, Chung Tsui-Yun, Hsu Chih-Ping, Hsieh Ming-Hsiun", "evidence": [ { "database": "UniProtKB", "id": "Q9SJM1", "url": "https://www.uniprot.org/uniprotkb/Q9SJM1" } ], 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"https://www.uniprot.org/uniprotkb/Q9SJN3-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MPQVDIEAFVSSVCIGGSDHRKIVCETLADDSTIPPYYNNSAVSPSDFPPESYFLSNDAQLEWLSDNAFFDRKDSQKGNSGILNSNPNSNPSSQRFLLKSKASIIGLPKPQKTCFNEAKQRRHAGKNRVILKRVGSRIKTDISLLEPSSPKVSCIGRVRSRRERSRRMHRQKSSRVEPVNRVKKPGFMASFRAIFRIKGGCKDVSARETHTSTRNTHDIRSRLPAEADEKSVFDGGEPVVPGLGGMTRFASGRRADLLGGGGC", "length": 263, "header": "tr|Q9SJN3-1|Q9SJN3_ARATH Isoform 1 of Uncharacterized protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SJN3-1" }, "isoforms": [ { "isoform_ac": "Q9SJN3-1", "url": "https://www.uniprot.org/uniprotkb/Q9SJN3/entry", "sequence": { "sequence": "MPQVDIEAFVSSVCIGGSDHRKIVCETLADDSTIPPYYNNSAVSPSDFPPESYFLSNDAQLEWLSDNAFFDRKDSQKGNSGILNSNPNSNPSSQRFLLKSKASIIGLPKPQKTCFNEAKQRRHAGKNRVILKRVGSRIKTDISLLEPSSPKVSCIGRVRSRRERSRRMHRQKSSRVEPVNRVKKPGFMASFRAIFRIKGGCKDVSARETHTSTRNTHDIRSRLPAEADEKSVFDGGEPVVPGLGGMTRFASGRRADLLGGGGC", "length": 263, "header": "tr|Q9SJN3-1|Q9SJN3_ARATH Isoform 1 of Uncharacterized protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SJN3-1" }, "locus": { "chromosome": "2", "start_pos": 15192480, "end_pos": 15193698, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT2G36220.1", "url": "https://www.ensemblgenomes.org/id/AT2G36220.1" }, { "database": "Ensembl Peptide", "id": "AT2G36220.1", "url": "https://www.ensemblgenomes.org/id/AT2G36220.1" } ] } } ], "glycosylation": [], "phosphorylation": [ { "start_pos": 103, "end_pos": 103, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SJN3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SJN3" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ], "site_lbl": "Ser103" }, { "start_pos": 148, "end_pos": 148, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", 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Mason T, Bowman C L, Barnstead M, Feldblyum T V, Buell C R, Ketchum K A, Lee J, Ronning C M, Koo H L, Moffat K S, Cronin L A, Shen M, Pai G, Van Aken S, Umayam L, Tallon L J, Gill J E, Adams M D, Carrera A J, Creasy T H, Goodman H M, Somerville C R, Copenhaver G P, Preuss D, Nierman W C, White O, Eisen J A, Salzberg S L, Fraser C M, Venter J C", "evidence": [ { "database": "UniProtKB", "id": "Q9SJN3", "url": "https://www.uniprot.org/uniprotkb/Q9SJN3" } ], "reference": [ { "type": "PubMed", "id": "10617197", "url": "https://glygen.org/publication/PubMed/10617197" } ] }, { "title": "A large-scale protein phosphorylation analysis reveals novel phosphorylation motifs and phosphoregulatory networks in Arabidopsis.", "journal": "Journal of proteomics", "date": "2013-01-14", "authors": "Wang Xu, Bian Yangyang, Cheng Kai, Gu Li-Fei, Ye Mingliang, Zou Hanfa, Sun Samuel Sai-Ming, He Jun-Xian", "evidence": [ { "database": "iPTMnet", "id": "Q9SJN3", "url": 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"authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9SJN3", "url": "https://www.uniprot.org/uniprotkb/Q9SJN3" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] }, { "title": "Protein Phosphatase 2Cs and Microtubule-Associated Stress Protein 1 Control Microtubule Stability, Plant Growth, and Drought Response.", "journal": "The Plant cell", "date": "2017-01", "authors": "Bhaskara Govinal Badiger, Wen Tuan-Nan, Nguyen Thao Thi, Verslues Paul E", "evidence": [ { "database": "iPTMnet", "id": "Q9SJN3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SJN3" } ], "reference": [ { "type": "PubMed", "id": "28011693", "url": "https://glygen.org/publication/PubMed/28011693" } ] } ], "pathway": [ { "id": "ath:AT2G36220", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT2G36220", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Biological Process", "total": 2, "go_terms": [ { "name": "cellular response to hypoxia", "id": "GO:0071456", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0071456", "evidence": [ { "database": "UniProtKB", "id": "Q9SJN3", "url": "https://www.uniprot.org/uniprotkb/Q9SJN3" } ], "pmid": "" }, { "name": "anaerobic respiration", "id": "GO:0009061", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009061", "evidence": [ { "database": "UniProtKB", "id": "Q9SJN3", "url": "https://www.uniprot.org/uniprotkb/Q9SJN3" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 39, "end_pos": 41, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [], 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] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9SJN9", "url": "https://www.uniprot.org/uniprotkb/Q9SJN9" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT2G15420", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT2G15420", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": {}, "pro_annotation": [], "site_annotation": [ { "start_pos": 741, "end_pos": 743, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [], 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"https://www.ncbi.nlm.nih.gov/protein/NP_181183" } ] } ], "protein_names": [ { "name": "Nucleolin-like protein", "type": "synonym", "evidence": [ { "id": "Q9SJR3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SJR3/entry#names_and_taxonomy" } ] }, { "name": "nucleolin-like protein", "type": "synonym", "evidence": [ { "id": "NP_181183", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_181183" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9SJR3", "url": "https://www.uniprot.org/uniprotkb/Q9SJR3" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "TRM27", "url": "https://www.uniprot.org/uniprotkb/Q9SJR3", "locus": { "chromosome": "CP002685.1", "start_pos": 15289107, "end_pos": 15286121, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "AT2G36420", "url": "https://www.ensemblgenomes.org/id/AT2G36420" } ] } } ], "crossref": [ { "id": "818216", "url": "https://www.ncbi.nlm.nih.gov/gene/818216", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "Q9SJR3", "url": "https://www.ebi.ac.uk/intact/interactors/id:Q9SJR3*", "database": "IntAct", "categories": [ "Other" ] }, { "id": "ath:AT2G36420", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT2G36420", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "CENSCFF", "url": "https://omabrowser.org/oma/group/CENSCFF/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "Q9SJR3", "url": "https://www.orthodb.org/?gene=Q9SJR3", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR33623", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR33623", "database": "PANTHER", 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"MAEKEKKKHLHEFLEDDQEPFHLNHYIGNLRSQMGCSDMRVKKRKSDNVATFPPGLFSCENSCFFAAHKSPDPRKSPLFELRSPGKKKIRDGRVFLQIPARTAAILLDAAARIQKQQSEKAKTNKARTRGNGFGMFGSVLKLLTYRITKPRLDNADGNAVSLERGSEPTSSSRRERIVEISDKCFCESPFHFVLQTTPSSSGHQTPHFTSTATSPARRSTEDEDSDETESLEKVRGQEEEDKEEEDKEQCSPVSVLDPLEEEEEDEDHHQHEPDPPNNLSCSFEIVQRAKRRLLKKLRRFEKLAGLDPVELEGKMSEEEDEEEEEYEESEEDDNIRIYDSDEEYEDVDEAMARESRCAEDEKRKKNDERQKKWRMMNAWRVGLGAEEDVDAVVRKDLREEAGEWTRHGGEVEEAVSDLEHSIFFVLIDEFSRELVSSFL", "length": 439, "header": "tr|Q9SJR3-1|Q9SJR3_ARATH Isoform 1 of Nucleolin-like protein OS=Arabidopsis thaliana OX=3702 GN=TRM27 PE=1 SV=1 CANONICAL=Q9SJR3-1" }, "isoforms": [ { "isoform_ac": "Q9SJR3-1", "url": "https://www.uniprot.org/uniprotkb/Q9SJR3/entry", "sequence": { "sequence": "MAEKEKKKHLHEFLEDDQEPFHLNHYIGNLRSQMGCSDMRVKKRKSDNVATFPPGLFSCENSCFFAAHKSPDPRKSPLFELRSPGKKKIRDGRVFLQIPARTAAILLDAAARIQKQQSEKAKTNKARTRGNGFGMFGSVLKLLTYRITKPRLDNADGNAVSLERGSEPTSSSRRERIVEISDKCFCESPFHFVLQTTPSSSGHQTPHFTSTATSPARRSTEDEDSDETESLEKVRGQEEEDKEEEDKEQCSPVSVLDPLEEEEEDEDHHQHEPDPPNNLSCSFEIVQRAKRRLLKKLRRFEKLAGLDPVELEGKMSEEEDEEEEEYEESEEDDNIRIYDSDEEYEDVDEAMARESRCAEDEKRKKNDERQKKWRMMNAWRVGLGAEEDVDAVVRKDLREEAGEWTRHGGEVEEAVSDLEHSIFFVLIDEFSRELVSSFL", "length": 439, "header": "tr|Q9SJR3-1|Q9SJR3_ARATH Isoform 1 of Nucleolin-like protein OS=Arabidopsis thaliana OX=3702 GN=TRM27 PE=1 SV=1 CANONICAL=Q9SJR3-1" }, "locus": { "chromosome": "2", "start_pos": 15286121, "end_pos": 15289107, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT2G36420.1", "url": "https://www.ensemblgenomes.org/id/AT2G36420.1" }, { "database": "Ensembl Peptide", "id": "AT2G36420.1", "url": "https://www.ensemblgenomes.org/id/AT2G36420.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": 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Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9SJR3", "url": "https://www.uniprot.org/uniprotkb/Q9SJR3" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT2G36420", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT2G36420", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": {}, "pro_annotation": [], "site_annotation": [ { "start_pos": 278, "end_pos": 280, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 278, "end_pos": 280 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 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"length": 1003, "header": "tr|Q9SJT4-1|Q9SJT4_ARATH Isoform 1 of RNA-binding (RRM/RBD/RNP motifs) family protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SJT4-1" }, "locus": { "chromosome": "2", "start_pos": 9173384, "end_pos": 9179166, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT2G21440.1", "url": "https://www.ensemblgenomes.org/id/AT2G21440.1" }, { "database": "Ensembl Peptide", "id": "AT2G21440.1", "url": "https://www.ensemblgenomes.org/id/AT2G21440.1" } ] } } ], "glycosylation": [], "phosphorylation": [ { "start_pos": 137, "end_pos": 137, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SJT4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SJT4" }, { "database": "PubMed", "id": "18463617", "url": "https://glygen.org/publication/PubMed/18463617" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ], "site_lbl": "Ser137" }, { "start_pos": 527, "end_pos": 527, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Thr", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SJT4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SJT4" }, { "database": "PubMed", "id": "22074104", "url": "https://glygen.org/publication/PubMed/22074104" } ], "site_lbl": "Thr527" }, { "start_pos": 533, "end_pos": 533, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SJT4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SJT4" }, { "database": "PubMed", "id": "22074104", "url": "https://glygen.org/publication/PubMed/22074104" } ], "site_lbl": "Ser533" }, { "start_pos": 534, "end_pos": 534, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SJT4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SJT4" }, { "database": "PubMed", "id": "22074104", "url": "https://glygen.org/publication/PubMed/22074104" } ], "site_lbl": "Ser534" }, { "start_pos": 620, "end_pos": 620, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SJT4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SJT4" } ], "site_lbl": "Ser620" } ], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "1999", "authors": "Lin X, Kaul S, Rounsley S, Shea T P, Benito M I, Town C D, Fujii C Y, Mason T, Bowman C L, Barnstead M, Feldblyum T V, Buell C R, Ketchum K A, Lee J, Ronning C M, Koo H L, Moffat K S, Cronin L A, Shen M, Pai G, Van Aken S, Umayam L, Tallon L J, Gill J E, Adams M D, Carrera A J, Creasy T H, Goodman H M, Somerville C R, Copenhaver G P, Preuss D, Nierman W C, White O, Eisen J A, Salzberg S L, Fraser C M, Venter J C", "evidence": [ { "database": "UniProtKB", "id": "Q9SJT4", "url": "https://www.uniprot.org/uniprotkb/Q9SJT4" } ], "reference": [ { "type": "PubMed", "id": "10617197", "url": "https://glygen.org/publication/PubMed/10617197" } ] }, { "title": "Large-scale phosphorylation mapping reveals the extent of tyrosine phosphorylation in Arabidopsis.", "journal": "Molecular systems biology", "date": "2008", "authors": "Sugiyama Naoyuki, Nakagami Hirofumi, Mochida Keiichi, Daudi Arsalan, Tomita Masaru, Shirasu Ken, Ishihama Yasushi", "evidence": [ { "database": "iPTMnet", "id": "Q9SJT4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SJT4" } ], "reference": [ { "type": "PubMed", "id": "18463617", "url": "https://glygen.org/publication/PubMed/18463617" } ] }, { "title": "Large-scale comparative phosphoproteomics identifies conserved phosphorylation sites in plants.", "journal": "Plant physiology", "date": "2010-07", "authors": "Nakagami Hirofumi, Sugiyama Naoyuki, Mochida Keiichi, Daudi Arsalan, Yoshida Yuko, Toyoda Tetsuro, Tomita Masaru, Ishihama Yasushi, Shirasu Ken", "evidence": [ { "database": "iPTMnet", "id": "Q9SJT4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SJT4" } ], "reference": [ { "type": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" } ] }, { "title": "Targeted quantitative phosphoproteomics approach for the detection of phospho-tyrosine signaling in plants.", "journal": "Journal of proteome research", "date": "2012-01-01", "authors": "Mithoe Sharon C, Boersema Paul J, Berke Lidija, Snel Berend, Heck Albert J R, Menke Frank L H", "evidence": [ { "database": "iPTMnet", "id": "Q9SJT4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SJT4" } ], 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Francis, Gevaert Kris, Vandepoele Klaas, De Smet Ive, De Jaeger Geert", "evidence": [ { "database": "iPTMnet", "id": "Q9SJT4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SJT4" } ], "reference": [ { "type": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ], "pathway": [ { "id": "ath:AT2G21440", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT2G21440", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "RNA binding", "id": "GO:0003723", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003723", "evidence": [ { "database": "UniProtKB", "id": "Q9SJT4", "url": "https://www.uniprot.org/uniprotkb/Q9SJT4" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": 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"categories": [ "Protein" ] }, { "id": "Q9SJV2-1", "url": "https://www.uniprot.org/uniprotkb/Q9SJV2-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MEITLNSGFKMPIVGLGVWRMEKEGIRDLILNAIKIGYRHLDCAADYRNETEVGDALTEAFKTGLVKREDLFITTKLWNSDHGHVIEACKDSLKKLQLDYLDLFLVHFPVATKHTGVGTTDSALGDDGVLDIDTTISLETTWHDMEKLVSMGLVRSIGISNYDVFLTRDCLAYSKIKPAVNQIETHPYFQRDSLVKFCQKHGICVTAHTPLGGATANAEWFGTVSCLDDPVLKDVAEKYKKTVAQVVLRWGIQRKTVVIPKTSKPARLEENFQVFDFELSKEDMEVIKSMERKYRTNQPAKFWNIDLYA", "length": 309, "header": "tr|Q9SJV2-1|Q9SJV2_ARATH Isoform 1 of NAD(P)-linked oxidoreductase superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SJV2-1" }, "isoforms": [ { "isoform_ac": "F4IGK5-1", "url": "https://www.uniprot.org/uniprotkb/F4IGK5/entry", "sequence": { "sequence": "MEITLNSGFKMPIVGLGVWRMEKEGIRDLILNAIKIGYRHLDCAADYRNETEVGDALTEAFKTGLVKREDLFITTKLWNSDHGHVIEACKDSLKKLQLDYLDLFLVHFPVATKHTGVGTTDSALGDDGVLDIDTTISLETTWHDMEKLVSMGLVRSIGISNYDVFLTRDCLAYSKIKPAVNQIETHPYFQRDSLVKFCQKHGICVTAHTPLGGATANAEWFGTVSCLDDPVLKVSPIL", "length": 238, "header": "tr|F4IGK5-1|F4IGK5_ARATH Computationally mapped isoform of NAD(P)-linked oxidoreductase superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SJV2-1" }, "locus": { "chromosome": "2", "start_pos": 9103181, "end_pos": 9105187, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT2G21250.2", "url": "https://www.ensemblgenomes.org/id/AT2G21250.2" }, { "database": "Ensembl Peptide", "id": "AT2G21250.2", "url": "https://www.ensemblgenomes.org/id/AT2G21250.2" } ] } }, { "isoform_ac": "Q9SJV2-1", "url": "https://www.uniprot.org/uniprotkb/Q9SJV2/entry", "sequence": { "sequence": "MEITLNSGFKMPIVGLGVWRMEKEGIRDLILNAIKIGYRHLDCAADYRNETEVGDALTEAFKTGLVKREDLFITTKLWNSDHGHVIEACKDSLKKLQLDYLDLFLVHFPVATKHTGVGTTDSALGDDGVLDIDTTISLETTWHDMEKLVSMGLVRSIGISNYDVFLTRDCLAYSKIKPAVNQIETHPYFQRDSLVKFCQKHGICVTAHTPLGGATANAEWFGTVSCLDDPVLKDVAEKYKKTVAQVVLRWGIQRKTVVIPKTSKPARLEENFQVFDFELSKEDMEVIKSMERKYRTNQPAKFWNIDLYA", "length": 309, "header": "tr|Q9SJV2-1|Q9SJV2_ARATH Isoform 1 of NAD(P)-linked oxidoreductase superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SJV2-1" }, "locus": { "chromosome": "2", "start_pos": 9103136, "end_pos": 9105187, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT2G21250.1", "url": "https://www.ensemblgenomes.org/id/AT2G21250.1" }, { "database": "Ensembl Peptide", "id": "AT2G21250.1", "url": "https://www.ensemblgenomes.org/id/AT2G21250.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "1999", "authors": "Lin X, Kaul S, Rounsley S, Shea T P, Benito M I, Town C D, Fujii C Y, Mason T, Bowman C L, Barnstead M, Feldblyum T V, Buell C R, Ketchum K A, Lee J, Ronning C M, Koo H L, Moffat K S, Cronin L A, Shen M, Pai G, Van Aken S, Umayam L, Tallon L J, Gill J E, Adams M D, Carrera A J, Creasy T H, Goodman H M, Somerville C R, Copenhaver G P, Preuss D, Nierman W C, White O, Eisen J A, Salzberg S L, Fraser C M, Venter J C", "evidence": [ { "database": "UniProtKB", "id": "Q9SJV2", "url": "https://www.uniprot.org/uniprotkb/Q9SJV2" } ], "reference": [ { "type": "PubMed", "id": "10617197", "url": "https://glygen.org/publication/PubMed/10617197" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9SJV2", "url": "https://www.uniprot.org/uniprotkb/Q9SJV2" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT2G21250", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT2G21250", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "G3GYP7-1", "protein_name": "Aldo-keto reductase family 1 member A1", "gene_name": "Akr1a1", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MASCVLLHTGQKMPLIGLGTWKSNPGQVKAAIKYALSVGYRHIDCAAVYGNEIEIGEALKENVGPGKAVPREELFVTSKLWNTKHHPEDVEAALRKTLADLQLEYLDLYLMHWPYAFERGDNPFPKNDDGTIRYDSTHYKETWKALEALVAKGLVKALGLSNFNSRQIDDILSVASVRPAVLQVECHPYLAQNELIAHCQARGLEVTAYSPLGSSDRAWRHPDEPVLLEEPVVLALAEKHGRSPAQILLRWQVQRKVVCIPKSITPSRILQNIQVFDFTFSPEEMKQLDALNKHWRYIVPMITVDGKSVPRDAGHPLYPFNDPY", "length": 324 }, "evidence": [ { "id": "Q9SJV2", "url": "https://omabrowser.org/oma/group/Q9SJV2/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "O70473-1", "protein_name": "Aldo-keto reductase family 1 member A1", "gene_name": "AKR1A1", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MASCVLLHTGQKMPLIGLGTWKSNPGQVKAAIKYALSVGYRHIDCAAVYGNEIEIGEALKENVGPGKAVPREELFVTSKLWNTKHHPEDVEAALRKTLADLQLEYLDLYLMHWPYAFERGDNPFPKNDDGTIRYDSTHYKETWKALEALVAKGLVKALGLSNFNSRQIDDILSVASVRPAVLQVECHPYLAQNELIAHCQARGLEVTAYSPLGSSDRAWRHPDEPVLLEEPVVLALAEKHGRSPAQILLRWQVQRKVVCIPKSITPSRILQNIQVFDFTFSPEEMKQLDALNKHWRYIVPMITVDGKSVPRDAGHPLYPFNDPY", "length": 324 }, "evidence": [ { "id": "Q9SJV2", "url": "https://omabrowser.org/oma/group/Q9SJV2/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "P14550-1", "protein_name": "Aldo-keto reductase family 1 member A1", "gene_name": "AKR1A1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MAASCVLLHTGQKMPLIGLGTWKSEPGQVKAAVKYALSVGYRHIDCAAIYGNEPEIGEALKEDVGPGKAVPREELFVTSKLWNTKHHPEDVEPALRKTLADLQLEYLDLYLMHWPYAFERGDNPFPKNADGTICYDSTHYKETWKALEALVAKGLVQALGLSNFNSRQIDDILSVASVRPAVLQVECHPYLAQNELIAHCQARGLEVTAYSPLGSSDRAWRDPDEPVLLEEPVVLALAEKYGRSPAQILLRWQVQRKVICIPKSITPSRILQNIKVFDFTFSPEEMKQLNALNKNWRYIVPMLTVDGKRVPRDAGHPLYPFNDPY", "length": 325 }, "evidence": [ { "id": "Q9SJV2", "url": "https://omabrowser.org/oma/group/Q9SJV2/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P51635-1", "protein_name": "Aldo-keto reductase family 1 member A1", "gene_name": "Akr1a1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MTASSVLLHTGQKMPLIGLGTWKSEPGQVKAAIKYALSVGYRHIDCASVYGNETEIGEALKESVGAGKAVPREELFVTSKLWNTKHHPEDVEPAVRKTLADLQLEYLDLYLMHWPYAFERGDNPFPKNADGTVKYDSTHYKETWKALEALVAKGLVKALGLSNFSSRQIDDVLSVASVRPAVLQVECHPYLAQNELIAHCQARGLEVTAYSPLGSSDRAWRHPDEPVLLEEPVVLALAEKHGRSPAQILLRWQVQRKVICIPKSITPSRILQNIQVFDFTFSPEEMKQLDALNKNWRYIVPMITVDGKRVPRDAGHPLYPFNDPY", "length": 325 }, "evidence": [ { "id": "Q9SJV2", "url": "https://omabrowser.org/oma/group/Q9SJV2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q3ZCJ2-1", "protein_name": "Aldo-keto reductase family 1 member A1", "gene_name": "AKR1A1", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MAASCILLHTGQKMPLIGLGTWKSDPGQVKAAIKYALSVGYRHIDCAAIYGNETEIGEALKENVGPGKLVPREELFVTSKLWNTKHHPEDVEPALRKTLADLQLEYLDLYLMHWPYAFERGDSPFPKNADGTIRYDSTHYKETWRALEALVAKGLVRALGLSNFNSRQIDDVLSVASVRPAVLQVECHPYLAQNELIAHCQARNLEVTAYSPLGSSDRAWRDPEEPVLLKEPVVLALAEKHGRSPAQILLRWQVQRKVSCIPKSVTPSRILENIQVFDFTFSPEEMKQLDALNKNLRFIVPMLTVDGKRVPRDAGHPLYPFNDPY", "length": 325 }, "evidence": [ { "id": "Q9SJV2", "url": "https://omabrowser.org/oma/group/Q9SJV2/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q5ZK84-1", "protein_name": "Aldo-keto reductase family 1 member A1", "gene_name": "AKR1A1", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MSAGCDFVALYNGQKIPLIGLGTWKSEPGQVKEAVKYALSVGYRHVDCAAAYSNEAEIGDAFQECVGPNKVIKREDLFVTSKLWNTKHHPEDVEPALRKTLADLKLDYLDLYLMHWPHAFERGDNLFPKNPDGTMRYDYTDYKDTWKAMEKLVEKGLAKAIGLSNFNSRQIDDVLSVATVKPAVLQVECHPYLAQNELIAHCQKRGLVVTAYSPLGSPDRMWKHPDEPVLLEEPGIKKLAEKYKKSPAQILLRWQAQRKVVTIPKSVTPARILQNLQVFDFSLTEEEMSHVGSLNKNWRYIVPMLTVNGKPVPRDAGHPNYPFNDPY", "length": 327 }, "evidence": [ { "id": "Q9SJV2", "url": "https://omabrowser.org/oma/group/Q9SJV2/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "Q9JII6-1", "protein_name": "Aldo-keto reductase family 1 member A1", "gene_name": "Akr1a1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MTASSVLLHTGQKMPLIGLGTWKSEPGQVKAAIKHALSAGYRHIDCASVYGNETEIGEALKESVGSGKAVPREELFVTSKLWNTKHHPEDVEPALRKTLADLQLEYLDLYLMHWPYAFERGDNPFPKNADGTVRYDSTHYKETWKALEVLVAKGLVKALGLSNFNSRQIDDVLSVASVRPAVLQVECHPYLAQNELIAHCHARGLEVTAYSPLGSSDRAWRHPDEPVLLEEPVVLALAEKHGRSPAQILLRWQVQRKVICIPKSINPSRILQNIQVFDFTFSPEEMKQLDALNKNWRYIVPMITVDGKRVPRDAGHPLYPFNDPY", "length": 325 }, "evidence": [ { "id": "Q9SJV2", "url": "https://omabrowser.org/oma/group/Q9SJV2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 3, "go_terms": [ { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "Q9SJV2", "url": "https://www.uniprot.org/uniprotkb/Q9SJV2" } ], "pmid": "" }, { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "Q9SJV2", "url": "https://www.uniprot.org/uniprotkb/Q9SJV2" } ], "pmid": "" }, { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "Q9SJV2", "url": "https://www.uniprot.org/uniprotkb/Q9SJV2" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 3, "go_terms": [ { "name": "aldose reductase (NADPH) activity", "id": "GO:0004032", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004032", "evidence": [ { "database": "UniProtKB", "id": "Q9SJV2", "url": "https://www.uniprot.org/uniprotkb/Q9SJV2" } ], "pmid": "" }, { "name": "aldose-6-phosphate reductase (NADPH) activity", "id": "GO:0047641", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0047641", "evidence": [ { "database": "UniProtKB", "id": "Q9SJV2", "url": "https://www.uniprot.org/uniprotkb/Q9SJV2" } ], "pmid": "" }, { "name": "oxidoreductase activity", "id": "GO:0016491", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016491", "evidence": [ { "database": "UniProtKB", "id": "Q9SJV2", "url": "https://www.uniprot.org/uniprotkb/Q9SJV2" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 49, "end_pos": 51, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "Q9SJV2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SJV2" }, { "id": "PF00248", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00248" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "NADP-dependent oxidoreductase", "eco_id": "ECO_0000259", "start_pos": 19, "end_pos": 290, "start_aa": "Trp", "end_aa": "Met", "glycosite_overlap": [] } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 49, "end_pos": 51 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "Q9SJV6-1", "uniprot_ac": "Q9SJV6", "uniprot_id": "Q9SJV6_ARATH", "mass": { "chemical_mass": 29005.0, "monoisotopic_mass": 29005.0 }, "refseq": {}, "gene_names": [ { "name": "F23H14.7", "type": "synonym", "evidence": [ { "id": "Q9SJV6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SJV6" } ] }, { "name": "F23H14_7", "type": "synonym", "evidence": [ { "id": "Q9SJV6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SJV6" } ] } ], "protein_names": [ { "name": "FAM133-like protein", "type": "synonym", "evidence": [ { "id": "Q9SJV6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SJV6/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9SJV6", "url": "https://www.uniprot.org/uniprotkb/Q9SJV6" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9SJV6", "locus": {} } ], "crossref": [ { "id": "814639", "url": "https://www.ncbi.nlm.nih.gov/gene/814639", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "ath:AT2G01100", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT2G01100", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "KHHKKRQ", "url": "https://omabrowser.org/oma/group/KHHKKRQ/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "Q9SJV6", "url": "https://www.orthodb.org/?gene=Q9SJV6", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR37715", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR37715", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR37715:SF1", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR37715:SF1", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "AT2G01100", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT2G01100", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9SJV6", "url": "https://www.uniprot.org/uniprotkb/Q9SJV6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9SJV6-1", "url": "https://www.uniprot.org/uniprotkb/Q9SJV6-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MDCKKFIQMVEEKKRRVLEKQEAPLKWEQKLEAAANAKADTETKVKRSKGPKRKQRAASESSSESDSSSEVRRKSRRSHNKHRRHAHSDSDDSDRRKEKKSRRQKRRSLSPSDDSTGDYESGSEDELRMKIKHHRRHKWHSSRKTCDDDSTEDVRRKHLKHHRRSEVVTSSDSEEESGRRRRGKYHRHNRGSASSSGSEEDSGKSMKRRQHKRHRLAESSSEEDGAMRRTRHHKHGRDSASESDGRR", "length": 247, "header": "tr|Q9SJV6-1|Q9SJV6_ARATH Isoform 1 of FAM133-like protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9SJV6-1" }, "isoforms": [ { "isoform_ac": "Q9SJV6-1", "url": "https://www.uniprot.org/uniprotkb/Q9SJV6/entry", "sequence": { "sequence": "MDCKKFIQMVEEKKRRVLEKQEAPLKWEQKLEAAANAKADTETKVKRSKGPKRKQRAASESSSESDSSSEVRRKSRRSHNKHRRHAHSDSDDSDRRKEKKSRRQKRRSLSPSDDSTGDYESGSEDELRMKIKHHRRHKWHSSRKTCDDDSTEDVRRKHLKHHRRSEVVTSSDSEEESGRRRRGKYHRHNRGSASSSGSEEDSGKSMKRRQHKRHRLAESSSEEDGAMRRTRHHKHGRDSASESDGRR", "length": 247, "header": "tr|Q9SJV6-1|Q9SJV6_ARATH Isoform 1 of FAM133-like protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9SJV6-1" }, "locus": { "chromosome": "2", "start_pos": 81440, "end_pos": 83217, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT2G01100.3", "url": "https://www.ensemblgenomes.org/id/AT2G01100.3" }, { "database": "Ensembl Peptide", "id": "AT2G01100.3", "url": "https://www.ensemblgenomes.org/id/AT2G01100.3" } ] } } ], "glycosylation": [], "phosphorylation": [ { "start_pos": 108, "end_pos": 108, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SJV6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SJV6" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ], "site_lbl": "Ser108" }, { "start_pos": 110, "end_pos": 110, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SJV6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SJV6" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ], "site_lbl": "Ser110" } ], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "1999", "authors": "Lin X, Kaul S, Rounsley S, Shea T P, Benito M I, Town C D, Fujii C Y, Mason T, Bowman C L, Barnstead M, Feldblyum T V, Buell C R, Ketchum K A, Lee J, Ronning C M, Koo H L, Moffat K S, Cronin L A, Shen M, Pai G, Van Aken S, Umayam L, Tallon L J, Gill J E, Adams M D, Carrera A J, Creasy T H, Goodman H M, Somerville C R, Copenhaver G P, Preuss D, Nierman W C, White O, Eisen J A, Salzberg S L, Fraser C M, Venter J C", "evidence": [ { "database": "UniProtKB", "id": "Q9SJV6", "url": "https://www.uniprot.org/uniprotkb/Q9SJV6" } ], "reference": [ { "type": "PubMed", "id": "10617197", "url": "https://glygen.org/publication/PubMed/10617197" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9SJV6", "url": "https://www.uniprot.org/uniprotkb/Q9SJV6" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] }, { "title": "Capturing the phosphorylation and protein interaction landscape of the plant TOR kinase.", "journal": "Nature plants", "date": "2019-03", "authors": "Van Leene Jelle, Han Chao, Gadeyne Astrid, Eeckhout Dominique, Matthijs Caroline, Cannoot Bernard, De Winne Nancy, Persiau Geert, Van De Slijke Eveline, Van de Cotte Brigitte, Stes Elisabeth, Van Bel Michiel, Storme Veronique, Impens Francis, Gevaert Kris, Vandepoele Klaas, De Smet Ive, De Jaeger Geert", "evidence": [ { "database": "iPTMnet", "id": "Q9SJV6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SJV6" } ], "reference": [ { "type": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ], "pathway": [ { "id": "ath:AT2G01100", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT2G01100", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0ABI0P349-1", "protein_name": "Protein SREK1IP1", "gene_name": "SREK1IP1", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "WFAPCVVYKTIPPETASAATWFRNLQGLLGPSVTVKPGCRGAGGRKTAPSLVLSSRPAGSERTLRSLGVLRPLLPTPWQFQPGLLSSGCNKDSVRAGCKKCGYPGHLTFECRNFLRVDPKRDIVLDVSSTSSEESDEENEELNKLQALQEKRINEEEEKKKAKSKEKIKLKKKRKRSYSSSSTEEDTSKQKKQKYQKKEKKKEKKSKSKKGKHHKKDKKKRKKEKHSSAPNSSEISKK", "length": 238 }, "evidence": [ { "id": "Q9SJV6", "url": "https://omabrowser.org/oma/group/Q9SJV6/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "G3HXH9-1", "protein_name": "Protein SREK1IP1", "gene_name": "Srek1ip1", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MAVPGCNKDNVRAGCKKCGYPGHLTFECRNFLRVDPKRDIVLDVSSTSSEDSDEENEELNKLQALQEKRINEEEEKKREKSKEKLKLKKKRKRSYSSSTEEDSSKQKKQKYQKKEKKKERKNKSKKGKHHKKEKKKRKKEKRSSPNRSEVTKK", "length": 153 }, "evidence": [ { "id": "Q9SJV6", "url": "https://omabrowser.org/oma/group/Q9SJV6/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "Q3B7G7-1", "protein_name": "Protein SREK1IP1", "gene_name": "srek1ip1", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MAAPGPNKDNIRAGCKRCGYPGHLTFECRNFLRVDPRKDIVLDVSSTSTEESDEEEQEALSKEKIFGSHSKGSQEDSRKEKHKKKSKERSRGKAKKRSYSSSDEEEDEMSKKKKKRKSNKKKGKKEKREKERKHKKKQKKKDTESSSSDSSSESSDTD", "length": 158 }, "evidence": [ { "id": "Q9SJV6", "url": "https://omabrowser.org/oma/group/Q9SJV6/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q4V9W2-1", "protein_name": "Protein SREK1IP1", "gene_name": "Srek1ip1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAVPGCNKDNVRAGCRKCGYPGHLTFECRNFLRVDPKRDIVLDVSSTSSEDSDEENEELNKLQALQEKRINEEEEKKKEKSREKIKLKKRRKRSYSSATEEDSAKQKKQKYQKKEKKKEKKNKSKKGKHHKKEKKKRKKEKRSSPYHSELTKK", "length": 153 }, "evidence": [ { "id": "Q9SJV6", "url": "https://omabrowser.org/oma/group/Q9SJV6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q5RJP9-1", "protein_name": "Protein SREK1IP1", "gene_name": "Srek1ip1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAVPGCNKDNVRAGCRKCGYPGHLTFECRNFLRVDPKRDIVLDVSSTSSEDSDEESEELNKLQALQEKRINEEEEKKKEKSREKIKLKKKRKRSNSSTTEEDSSKQKKQKYQKKEKKKEKKNKSKKGKHHKKEKKKRKKEKRSSPNRSEVTKK", "length": 153 }, "evidence": [ { "id": "Q9SJV6", "url": "https://omabrowser.org/oma/group/Q9SJV6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q8N9Q2-1", "protein_name": "Protein SREK1IP1", "gene_name": "SREK1IP1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MAVPGCNKDSVRAGCKKCGYPGHLTFECRNFLRVDPKRDIVLDVSSTSSEDSDEENEELNKLQALQEKRINEEEEKKKEKSKEKIKLKKKRKRSYSSSSTEEDTSKQKKQKYQKKEKKKEKKSKSKKGKHHKKEKKKRKKEKHSSTPNSSEFSRK", "length": 155 }, "evidence": [ { "id": "Q9SJV6", "url": "https://omabrowser.org/oma/group/Q9SJV6/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q9SJV6", "url": "https://www.uniprot.org/uniprotkb/Q9SJV6" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [ 108, 110 ], "sequon_annotation_sites": [] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 2 }, { "field": "total_sites", "count": 2 } ], "sort_fields": [ "start_pos", "end_pos", "kinase_uniprot_canonical_ac", "kinase_gene_name", "residue", "comment", "site_lbl" ] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 3 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "Q9SJV8-1", "uniprot_ac": "Q9SJV8", "uniprot_id": "Q9SJV8_ARATH", "mass": { "chemical_mass": 24764.0, "monoisotopic_mass": 24764.0 }, "refseq": {}, "gene_names": [ { "name": "F23H14.5", "type": "synonym", "evidence": [ { "id": "Q9SJV8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SJV8" } ] }, { "name": "F23H14_5", "type": "synonym", "evidence": [ { "id": "Q9SJV8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SJV8" } ] } ], "protein_names": [ { "name": "Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family", "type": "synonym", "evidence": [ { "id": "Q9SJV8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SJV8/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9SJV8", "url": "https://www.uniprot.org/uniprotkb/Q9SJV8" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9SJV8", "locus": {} } ], "crossref": [ { "id": "814636", "url": "https://www.ncbi.nlm.nih.gov/gene/814636", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR004864", "url": "https://www.ebi.ac.uk/interpro/entry/IPR004864", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR044839", "url": "https://www.ebi.ac.uk/interpro/entry/IPR044839", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT2G01080", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT2G01080", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "ESRFTIM", "url": "https://omabrowser.org/oma/group/ESRFTIM/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR31234", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31234", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR31234:SF8", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31234:SF8", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF03168", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF03168", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "AT2G01080", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT2G01080", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9SJV8", "url": "https://www.uniprot.org/uniprotkb/Q9SJV8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9SJV8-1", "url": "https://www.uniprot.org/uniprotkb/Q9SJV8-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MPPPPSSSRAGLNGDPIAAQNQQPYYRSYSSSSSASLKGCCCCLFLLFAFLALLVLAVVLIVILAVKPKKPQFDLQQVAVVYMGISNPSAVLDPTTASLSLTIRMLFTAVNPNKVGIRYGESSFTVMYKGMPLGRATVPGFYQDAHSTKNVEATISVDRVNLMQAHAADLVRDASLNDRVELTVRGDVGAKIRVMNFDSPGVQVSVNCGIGISPRKQALIYKQCGFDGLSV", "length": 231, "header": "tr|Q9SJV8-1|Q9SJV8_ARATH Isoform 1 of Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=2 CANONICAL=Q9SJV8-1" }, "isoforms": [ { "isoform_ac": "Q9SJV8-1", "url": "https://www.uniprot.org/uniprotkb/Q9SJV8/entry", "sequence": { "sequence": "MPPPPSSSRAGLNGDPIAAQNQQPYYRSYSSSSSASLKGCCCCLFLLFAFLALLVLAVVLIVILAVKPKKPQFDLQQVAVVYMGISNPSAVLDPTTASLSLTIRMLFTAVNPNKVGIRYGESSFTVMYKGMPLGRATVPGFYQDAHSTKNVEATISVDRVNLMQAHAADLVRDASLNDRVELTVRGDVGAKIRVMNFDSPGVQVSVNCGIGISPRKQALIYKQCGFDGLSV", "length": 231, "header": "tr|Q9SJV8-1|Q9SJV8_ARATH Isoform 1 of Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=2 CANONICAL=Q9SJV8-1" }, "locus": { "chromosome": "2", "start_pos": 77888, "end_pos": 79373, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT2G01080.1", "url": "https://www.ensemblgenomes.org/id/AT2G01080.1" }, { "database": "Ensembl Peptide", "id": "AT2G01080.1", "url": "https://www.ensemblgenomes.org/id/AT2G01080.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "1999", "authors": "Lin X, Kaul S, Rounsley S, Shea T P, Benito M I, Town C D, Fujii C Y, Mason T, Bowman C L, Barnstead M, Feldblyum T V, Buell C R, Ketchum K A, Lee J, Ronning C M, Koo H L, Moffat K S, Cronin L A, Shen M, Pai G, Van Aken S, Umayam L, Tallon L J, Gill J E, Adams M D, Carrera A J, Creasy T H, Goodman H M, Somerville C R, Copenhaver G P, Preuss D, Nierman W C, White O, Eisen J A, Salzberg S L, Fraser C M, Venter J C", "evidence": [ { "database": "UniProtKB", "id": "Q9SJV8", "url": "https://www.uniprot.org/uniprotkb/Q9SJV8" } ], "reference": [ { "type": "PubMed", "id": "10617197", "url": "https://glygen.org/publication/PubMed/10617197" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, 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"authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "Q9SK77-1", "uniprot_ac": "Q9SK77", "uniprot_id": "Q9SK77_ARATH", "mass": { "chemical_mass": 79599.0, "monoisotopic_mass": 79599.0 }, "refseq": { "ac": "NP_179614", "name": "GPI-anchored adhesin-like protein, putative (DUF3741)", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_179614" }, "gene_names": [ { "name": "TRM17", "type": "recommended", "evidence": [ { "id": "Q9SK77", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SK77" } ] }, { "name": "F11A3.21", "type": "synonym", "evidence": [ { "id": "NP_179614", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_179614" }, { "id": "Q9SK77", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SK77" } ] }, { "name": "F11A3_21", "type": "synonym", "evidence": [ { "id": "NP_179614", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_179614" }, { "id": "Q9SK77", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SK77" } ] }, { "name": "TON1 Recruiting Motif 17", "type": "synonym", "evidence": [ { "id": "NP_179614", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_179614" }, { "id": "Q9SK77", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SK77" } ] }, { "name": "TRM17", "type": "synonym", "evidence": [ { "id": "NP_179614", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_179614" } ] } ], "protein_names": [ { "name": "GPI-anchored adhesin-like protein, putative (DUF3741)", "type": "synonym", "evidence": [ { "id": "NP_179614", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_179614" }, { "id": "Q9SK77", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SK77/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9SK77", "url": "https://www.uniprot.org/uniprotkb/Q9SK77" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "TRM17", "url": "https://www.uniprot.org/uniprotkb/Q9SK77", "locus": { "chromosome": "CP002685.1", "start_pos": 8727626, "end_pos": 8730525, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "AT2G20240", "url": "https://www.ensemblgenomes.org/id/AT2G20240" } ] } } ], "crossref": [ { "id": "816543", "url": "https://www.ncbi.nlm.nih.gov/gene/816543", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR022212", "url": "https://www.ebi.ac.uk/interpro/entry/IPR022212", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR025486", "url": "https://www.ebi.ac.uk/interpro/entry/IPR025486", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT2G20240", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT2G20240", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "QETGWID", "url": "https://omabrowser.org/oma/group/QETGWID/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "Q9SK77", "url": "https://www.orthodb.org/?gene=Q9SK77", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR46634", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR46634", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR46634:SF9", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR46634:SF9", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF12552", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF12552", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF14309", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF14309", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_179614", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_179614", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT2G20240", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT2G20240", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9SK77", "url": "https://www.uniprot.org/uniprotkb/Q9SK77", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9SK77-1", "url": "https://www.uniprot.org/uniprotkb/Q9SK77-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MPDLRPGVFSKSKETSTESMKKLIAREMSKDVVEDRQSSNNVVAKLMGLETSAPRSRSKSSSRCSLTCVGSKEAGKHHREDETWDQKASNLSSKASMSDKQMDLVRRKFMEAKHLVTDDRLHRSSELQEALQVLSSNKDLFVKFLQESNSLFPQHLSDFQPVPPHPDAKRITVLRPSKAVGVQKCLAEDSKKPASLNQETGWIDAVQPTRIVVLKPSPGKSLDIKAIASSPPYFDEAGDAETREVAKEITRQIRETVEGHCRNETLSSSSSSVLSNGYMGDDCSLNRSNYEYLVGNITNSEIMSPSSRHSWDCANKFESPFSSSSLSRVSFSPDSSVYREAKKRLSERWAMMSLNGDTQQPKNFPKVSTALGEVLALSETKVPTGSSEETNKVKQETRRSISCIGSGLDQVESTSDSLNILERSRSVPEIRLNGGTSKAQAPQELTESRSLKSSWKVSSLFFFRNKKSNKDKTFAPSQLAIHRDAFQEQRIFTSEGDVENENQDQPSPVSVLQPAFEEECSGSVKPKTTQGEEMSLKSNLIDKSPPIGTIARILAWEDESYTDTSKPAMGIEEDEDWYGFIKTLLTASGFSGSDSLMTRWHSLESPLDPSLRDKFANKELIKRRKQRSNRKLVFDCVNAIITETTSTLAHTGLTKGFNMLEHVWTELQEWAVNDEVAGKMWSYGLQVEMNNLGIEIEVILLQELVEEAVFDLI", "length": 713, "header": "tr|Q9SK77-1|Q9SK77_ARATH Isoform 1 of GPI-anchored adhesin-like protein, putative (DUF3741) OS=Arabidopsis thaliana OX=3702 GN=TRM17 PE=1 SV=1 CANONICAL=Q9SK77-1" }, "isoforms": [ { "isoform_ac": "Q9SK77-1", "url": "https://www.uniprot.org/uniprotkb/Q9SK77/entry", "sequence": { "sequence": "MPDLRPGVFSKSKETSTESMKKLIAREMSKDVVEDRQSSNNVVAKLMGLETSAPRSRSKSSSRCSLTCVGSKEAGKHHREDETWDQKASNLSSKASMSDKQMDLVRRKFMEAKHLVTDDRLHRSSELQEALQVLSSNKDLFVKFLQESNSLFPQHLSDFQPVPPHPDAKRITVLRPSKAVGVQKCLAEDSKKPASLNQETGWIDAVQPTRIVVLKPSPGKSLDIKAIASSPPYFDEAGDAETREVAKEITRQIRETVEGHCRNETLSSSSSSVLSNGYMGDDCSLNRSNYEYLVGNITNSEIMSPSSRHSWDCANKFESPFSSSSLSRVSFSPDSSVYREAKKRLSERWAMMSLNGDTQQPKNFPKVSTALGEVLALSETKVPTGSSEETNKVKQETRRSISCIGSGLDQVESTSDSLNILERSRSVPEIRLNGGTSKAQAPQELTESRSLKSSWKVSSLFFFRNKKSNKDKTFAPSQLAIHRDAFQEQRIFTSEGDVENENQDQPSPVSVLQPAFEEECSGSVKPKTTQGEEMSLKSNLIDKSPPIGTIARILAWEDESYTDTSKPAMGIEEDEDWYGFIKTLLTASGFSGSDSLMTRWHSLESPLDPSLRDKFANKELIKRRKQRSNRKLVFDCVNAIITETTSTLAHTGLTKGFNMLEHVWTELQEWAVNDEVAGKMWSYGLQVEMNNLGIEIEVILLQELVEEAVFDLI", "length": 713, "header": "tr|Q9SK77-1|Q9SK77_ARATH Isoform 1 of GPI-anchored adhesin-like protein, putative (DUF3741) OS=Arabidopsis thaliana OX=3702 GN=TRM17 PE=1 SV=1 CANONICAL=Q9SK77-1" }, "locus": { "chromosome": "2", "start_pos": 8727626, "end_pos": 8730525, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT2G20240.1", "url": "https://www.ensemblgenomes.org/id/AT2G20240.1" }, { "database": "Ensembl Peptide", "id": "AT2G20240.1", "url": "https://www.ensemblgenomes.org/id/AT2G20240.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "1999", "authors": "Lin X, Kaul S, Rounsley S, Shea T P, Benito M I, Town C D, Fujii C Y, Mason T, Bowman C L, Barnstead M, Feldblyum T V, Buell C R, Ketchum K A, Lee J, Ronning C M, Koo H L, Moffat K S, Cronin L A, Shen M, Pai G, Van Aken S, Umayam L, Tallon L J, Gill J E, Adams M D, Carrera A J, Creasy T H, Goodman H M, Somerville C R, Copenhaver G P, Preuss D, Nierman W C, White O, Eisen J A, Salzberg S L, Fraser C M, Venter J C", "evidence": [ { "database": "UniProtKB", "id": "Q9SK77", "url": "https://www.uniprot.org/uniprotkb/Q9SK77" } ], "reference": [ { "type": "PubMed", "id": "10617197", "url": "https://glygen.org/publication/PubMed/10617197" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9SK77", "url": "https://www.uniprot.org/uniprotkb/Q9SK77" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT2G20240", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT2G20240", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q9SK77", "url": "https://www.uniprot.org/uniprotkb/Q9SK77" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 263, "end_pos": 265, "annotation": "n_glycosylation_sequon" }, { "start_pos": 286, "end_pos": 288, "annotation": "n_glycosylation_sequon" }, { "start_pos": 296, "end_pos": 298, "annotation": "n_glycosylation_sequon" }, { "start_pos": 90, "end_pos": 92, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "Q9SK77", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SK77" }, { "id": "PF12552", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF12552" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "DUF3741", "eco_id": "ECO_0000259", "start_pos": 92, "end_pos": 152, "start_aa": "Ser", "end_aa": "Phe", "glycosite_overlap": [] }, { "evidence": [ { "id": "Q9SK77", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SK77" }, { "id": "PF14309", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF14309" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "LONGIFOLIA 1/2-like C-terminal", "eco_id": "ECO_0000259", "start_pos": 579, "end_pos": 707, "start_aa": "Gly", "end_aa": "Glu", "glycosite_overlap": [] } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 263, "end_pos": 265 }, { "start_pos": 286, "end_pos": 288 }, { "start_pos": 296, "end_pos": 298 }, { "start_pos": 90, "end_pos": 92 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", 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"total", "count": 2 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "Q9SK85-1", "uniprot_ac": "Q9SK85", "uniprot_id": "Q9SK85_ARATH", "mass": { "chemical_mass": 53061.0, "monoisotopic_mass": 53061.0 }, "refseq": {}, "gene_names": [ { "name": "F12K8.23", "type": "synonym", "evidence": [ { "id": "Q9SK85", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SK85" } ] }, { "name": "F12K8_23", "type": "synonym", "evidence": [ { "id": "Q9SK85", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SK85" } ] } ], "protein_names": [ { "name": "Hydroxyproline-rich glycoprotein family protein", "type": "synonym", "evidence": [ { "id": "Q9SK85", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SK85/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9SK85", "url": "https://www.uniprot.org/uniprotkb/Q9SK85" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9SK85", "locus": {} } ], "crossref": [ { "id": "AT1G22420", "url": "https://bar.utoronto.ca/thalemine/portal.do?externalids=AT1G22420", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "838848", "url": "https://www.ncbi.nlm.nih.gov/gene/838848", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "ath:AT1G22420", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT1G22420", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "INGEQHW", "url": "https://omabrowser.org/oma/group/INGEQHW/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": 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Hydroxyproline-rich glycoprotein family protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9SK85-1" }, "isoforms": [ { "isoform_ac": "Q9SK85-1", "url": "https://www.uniprot.org/uniprotkb/Q9SK85/entry", "sequence": { "sequence": "MKTRNQKITNLPQSFSMDLDPNQTNNVSSERSKLKAKEPVILKIHKHHFKEMVHRLTGSTCGRRFDMLRPPPFVVNNSPPSASRITTQRPYRFPTVPTMTDPMITSTVESLNTRPPSPPSLPREKDSVEARVMEDDMNQEQLHGSMLPPLFVNGDECQQQESIPPPPVPANITPPPVPANITPPPVPTSAPFGFFEWVMSPDNLQTENIQQPPLPTTLPSGSLDWANSMTDLLSEGIPPPVQVTSPDESLYWQLPESLNGPLSPSLMLSPVQRSPENSLLGSVDLPNPLNNIRPENVPPQVSAASPLWSLDCPIQSENVLPLVSATSPLDWPNPQNNLQPENVPPLVPATSPSMSLDFPNFQNTPPQVLVTSSLDWPNPQNNLQPDNVLPVTSPLDWTPNQLENYVQLENVPPLVPENLPLDLPNPQNNLQPENVPPLVPETLPLMSVDLPNFQNTPPPVPVTSPLGNLEWPFHRSIYLT", "length": 480, "header": "tr|Q9SK85-1|Q9SK85_ARATH Isoform 1 of Hydroxyproline-rich glycoprotein family protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9SK85-1" }, "locus": { "chromosome": "1", "start_pos": 7916076, "end_pos": 7917518, "strand": "+", 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"categories": [ "Protein Classification" ] }, { "id": "PF06075", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF06075", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF21647", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF21647", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_180751", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_180751", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT2G31920", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT2G31920", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9SKA8", "url": "https://www.uniprot.org/uniprotkb/Q9SKA8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9SKA8-1", "url": "https://www.uniprot.org/uniprotkb/Q9SKA8-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MASLTPGVLSNLLNIAAGNSPSSPPLLSSHRSPLLQVIEIVPCLSDDQWRSEAFFVKVSDSLHAAYVAVSTGDDADLIRSDEIQLGQFIYICGGLHVEKGCPVPVIRGLKPVPKRRMCVGNPSDLYSSDLLLPFTQVSVSPTTTKKKNLVETRRLSLDSARRSCWDQTPPVTRRRDAALLLSSPRLKSKLVLNDKSLLKIESPSKYFNCGTSPALRNKNVVKPGSPISMASSPKDGIKSPISKHLNCETPALRSRYVVKPASPISVTRSPKDGIKSLSKAVTPPVALFKVPSSHMTWSDQRMSWSGLPKTIQLLGKEVSSHRQVAVSAAVSALEEASAMESVLFSLQAFAELCDSTKKLSTGQVVARFLDIYHNTQNTCKAVHRLLTQNRNNGSCRLVVNKNATSWVQAAVVTGFSQFNLFKEPGKKGDAADHHYIVMQNSSEKLNPKETTSSRTPSYKGAKPPATKHCSVSDRSSLEGKSSLKDSTSLADELVQVSSQWFLKYLENSLNKGSFLVKTEETNGKESLLVHLKALNHWLDDLNLNRTETNEKVEDLRKKLQRFLLEHIESVIGDTYNMKRKIINSI", "length": 585, "header": "sp|Q9SKA8-1|CORD7_ARATH Isoform 1 of Protein CORTICAL MICROTUBULE DISORDERING 7 OS=Arabidopsis thaliana OX=3702 GN=CORD7 PE=2 SV=1 CANONICAL=Q9SKA8-1" }, "isoforms": [ { "isoform_ac": "Q9SKA8-1", "url": "https://www.uniprot.org/uniprotkb/Q9SKA8/entry#Q9SKA8-1", "sequence": { "sequence": "MASLTPGVLSNLLNIAAGNSPSSPPLLSSHRSPLLQVIEIVPCLSDDQWRSEAFFVKVSDSLHAAYVAVSTGDDADLIRSDEIQLGQFIYICGGLHVEKGCPVPVIRGLKPVPKRRMCVGNPSDLYSSDLLLPFTQVSVSPTTTKKKNLVETRRLSLDSARRSCWDQTPPVTRRRDAALLLSSPRLKSKLVLNDKSLLKIESPSKYFNCGTSPALRNKNVVKPGSPISMASSPKDGIKSPISKHLNCETPALRSRYVVKPASPISVTRSPKDGIKSLSKAVTPPVALFKVPSSHMTWSDQRMSWSGLPKTIQLLGKEVSSHRQVAVSAAVSALEEASAMESVLFSLQAFAELCDSTKKLSTGQVVARFLDIYHNTQNTCKAVHRLLTQNRNNGSCRLVVNKNATSWVQAAVVTGFSQFNLFKEPGKKGDAADHHYIVMQNSSEKLNPKETTSSRTPSYKGAKPPATKHCSVSDRSSLEGKSSLKDSTSLADELVQVSSQWFLKYLENSLNKGSFLVKTEETNGKESLLVHLKALNHWLDDLNLNRTETNEKVEDLRKKLQRFLLEHIESVIGDTYNMKRKIINSI", "length": 585, "header": "sp|Q9SKA8-1|CORD7_ARATH Isoform 1 of Protein CORTICAL MICROTUBULE DISORDERING 7 OS=Arabidopsis thaliana OX=3702 GN=CORD7 PE=2 SV=1 CANONICAL=Q9SKA8-1" }, "locus": { "chromosome": "2", "start_pos": 13573668, "end_pos": 13576381, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT2G31920.1", "url": "https://www.ensemblgenomes.org/id/AT2G31920.1" }, { "database": "Ensembl Peptide", "id": "AT2G31920.1", "url": "https://www.ensemblgenomes.org/id/AT2G31920.1" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "other", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 282, "start_aa": "Thr", "end_pos": 282, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr282", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ], "filter_code": "000000000000000010000.00000000001000.0.01000" } ], "phosphorylation": [ { "start_pos": 182, "end_pos": 182, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SKA8", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SKA8" } ], "site_lbl": "Ser182" } ], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "1999", "authors": "Lin X, Kaul S, Rounsley S, Shea T P, Benito M I, Town C D, Fujii C Y, Mason T, Bowman C L, Barnstead M, Feldblyum T V, Buell C R, Ketchum K A, Lee J, Ronning C M, Koo H L, Moffat K S, Cronin L A, Shen M, Pai G, Van Aken S, Umayam L, Tallon L J, Gill J E, Adams M D, Carrera A J, Creasy T H, Goodman H M, Somerville C R, Copenhaver G P, Preuss D, Nierman W C, White O, Eisen J A, Salzberg S L, Fraser C M, Venter J C", "evidence": [ { "database": "UniProtKB", "id": "Q9SKA8", "url": "https://www.uniprot.org/uniprotkb/Q9SKA8" } ], "reference": [ { "type": "PubMed", "id": "10617197", "url": "https://glygen.org/publication/PubMed/10617197" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9SKA8", "url": "https://www.uniprot.org/uniprotkb/Q9SKA8" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] }, { "title": "CORTICAL MICROTUBULE DISORDERING1 is required for secondary cell wall patterning in xylem vessels.", "journal": "Plant Cell", "date": "2017", "authors": "Sasaki Takema, Fukuda Hiroo, Oda Yoshihisa", "evidence": [ { "database": "UniProtKB", "id": "Q9SKA8", "url": "https://www.uniprot.org/uniprotkb/Q9SKA8" } ], "reference": [ { "type": "PubMed", "id": "29133465", "url": "https://glygen.org/publication/PubMed/29133465" } ] } ], "pathway": [ { "id": "ath:AT2G31920", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT2G31920", "resource": "KEGG Pathway" } ], "orthologs": [], 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"UniProtKB", "id": "Q9SKA8", "url": "https://www.uniprot.org/uniprotkb/Q9SKA8" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "microtubule cytoskeleton organization", "id": "GO:0000226", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000226", "evidence": [ { "database": "UniProtKB", "id": "Q9SKA8", "url": "https://www.uniprot.org/uniprotkb/Q9SKA8" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 392, "end_pos": 394, "annotation": "n_glycosylation_sequon" }, { "start_pos": 402, "end_pos": 404, "annotation": "n_glycosylation_sequon" }, { "start_pos": 440, "end_pos": 442, "annotation": "n_glycosylation_sequon" }, { "start_pos": 544, "end_pos": 546, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-Q9SKA8-F1", "pdb_chain": "global", "start_pos": 1, 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"journal": "Molecular & cellular proteomics : MCP", "date": "2007-07", "authors": "Benschop Joris J, Mohammed Shabaz, O'Flaherty Martina, Heck Albert J R, Slijper Monique, Menke Frank L H", "evidence": [ { "database": "iPTMnet", "id": "Q9SKB8", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SKB8" } ], "reference": [ { "type": "PubMed", "id": "17317660", "url": "https://glygen.org/publication/PubMed/17317660" } ] }, { "title": "Large-scale Arabidopsis phosphoproteome profiling reveals novel chloroplast kinase substrates and phosphorylation networks.", "journal": "Plant physiology", "date": "2009-06", "authors": "Reiland Sonja, Messerli Ga\u00eblle, Baerenfaller Katja, Gerrits Bertran, Endler Anne, Grossmann Jonas, Gruissem Wilhelm, Baginsky Sacha", "evidence": [ { "database": "iPTMnet", "id": "Q9SKB8", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SKB8" } ], "reference": [ { "type": "PubMed", "id": "19376835", "url": 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phosphorylation analysis reveals novel phosphorylation motifs and phosphoregulatory networks in Arabidopsis.", "journal": "Journal of proteomics", "date": "2013-01-14", "authors": "Wang Xu, Bian Yangyang, Cheng Kai, Gu Li-Fei, Ye Mingliang, Zou Hanfa, Sun Samuel Sai-Ming, He Jun-Xian", "evidence": [ { "database": "iPTMnet", "id": "Q9SKH9", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SKH9" } ], "reference": [ { "type": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" } ] }, { "title": "Quantitative phosphoproteomics after auxin-stimulated lateral root induction identifies an SNX1 protein phosphorylation site required for growth.", "journal": "Molecular & cellular proteomics : MCP", "date": "2013-05", "authors": "Zhang Hongtao, Zhou Houjiang, Berke Lidija, Heck Albert J R, Mohammed Shabaz, Scheres Ben, Menke Frank L H", "evidence": [ { "database": "iPTMnet", "id": "Q9SKH9", "url": 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"2", "start_pos": 6615456, "end_pos": 6619074, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT2G15240.1", "url": "https://www.ensemblgenomes.org/id/AT2G15240.1" }, { "database": "Ensembl Peptide", "id": "AT2G15240.1", "url": "https://www.ensemblgenomes.org/id/AT2G15240.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "1999", "authors": "Lin X, Kaul S, Rounsley S, Shea T P, Benito M I, Town C D, Fujii C Y, Mason T, Bowman C L, Barnstead M, Feldblyum T V, Buell C R, Ketchum K A, Lee J, Ronning C M, Koo H L, Moffat K S, Cronin L A, Shen M, Pai G, Van Aken S, Umayam L, Tallon L J, Gill J E, Adams M D, Carrera A J, Creasy T H, Goodman H M, Somerville C R, Copenhaver G P, Preuss D, Nierman W C, White O, Eisen J A, Salzberg S L, Fraser C M, Venter J C", "evidence": [ { "database": "UniProtKB", "id": "Q9SKL4", "url": "https://www.uniprot.org/uniprotkb/Q9SKL4" } ], "reference": [ { "type": "PubMed", "id": "10617197", "url": "https://glygen.org/publication/PubMed/10617197" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9SKL4", "url": "https://www.uniprot.org/uniprotkb/Q9SKL4" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT2G15240", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT2G15240", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "O55227-1", "protein_name": "Protein unc-50 homolog", "gene_name": "Unc50", "tax_id": 10116, "organism": "Rattus norvegicus", 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"database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q53HI1-1", "protein_name": "Protein unc-50 homolog", "gene_name": "UNC50", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MLPSTSVNSLVQGNGVLNSRDAARHTAGAKRYKYLRRLFRFRQMDFEFAAWQMLYLFTSPQRVYRNFHYRKQTKDQWARDDPAFLVLLSIWLCVSTIGFGFVLDMGFFETIKLLLWVVLIDCVGVGLLIATLMWFISNKYLVKRQSRDYDVEWGYAFDVHLNAFYPLLVILHFIQLFFINHVILTDTFIGYLVGNTLWLVAVGYYIYVTFLGYSALPFLKNTVILLYPFAPLILLYGLSLALGWNFTHTLCSFYKYRVK", "length": 259 }, "evidence": [ { "id": "Q9SKL4", "url": "https://omabrowser.org/oma/group/Q9SKL4/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q54DD7-1", "protein_name": "Protein unc-50 homolog", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MLPISYTNLNSSRITRDGTASSASRYRRLIPEYFRRIFHYPQMDIEYTFWIMFYLCFNPSRVYRVTSWHKQTKNQWARDDPAFAVILVFFMAIASMSYAITFHFLSFLNVIKVMFWAVFVDFITVGLLIATIGWWVTNKFLRVSVHNHSVDQSVEWLYAFDIHCNSFFPLFIILYVVQFFLLPILLSNSLFAAILSNTLYIIGFSYYYYVTFLGYNALPFLQHTVVFLYPIGILFALYIVSVVMGKNLTVSIINFYFGFQL", "length": 261 }, "evidence": [ { "id": "Q9SKL4", "url": "https://omabrowser.org/oma/group/Q9SKL4/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q9CQ61-1", "protein_name": "Protein unc-50 homolog", "gene_name": "Unc50", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLPSTSLSSSMHGNGVLNSRDAARHTAGAKRYKYLRRLFRFRQMDFEFAAWQMLYLFTSPQRVYRNFHYRKQTKDQWARDDPAFLVLLSIWLCVSTIGFGFVLDMGFFETIKLLLWVVFIDCVGVGLLISTLMWFVSNKYLVKRQSRDYDVEWGYAFDVHLNAFYPLLVILHFIQLFFINHVILTDTFIGYLVGNTLWLIAVGYYIYVTFLGYSALPFLKNTVILLYPFAPLMVLYGLSLALGWNFTHTLCSFYKYRVK", "length": 259 }, "evidence": [ { "id": "Q9SKL4", "url": "https://omabrowser.org/oma/group/Q9SKL4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9VHN5-1", "protein_name": "Protein unc-50 homolog", "gene_name": "Unc50", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MTQYSHVKYTQSPTPSVVSGYSSASRLHSPLPPPANHRRDCLSATTKSYKYLRRLLKFNQMDFEFALWQMLYLFVAPQKVYRNFNYRKQTKSQFARDDPAFLVLLVVCLCVTSLGFAYVLGLSFWQSISFIFYVVFVDCIFVGIIIASFFWAVTNRYLRTNSLEPDIEWGYAFDVHLNAFFPPLMLLHFIQLFFYNWLISQTWFISRFLGNTFWLMGMGYYVYITFLGYNCIPHLKNTRIILIALPIIFLLFLVVTIIGWNATISFVNFYKYRVY", "length": 275 }, "evidence": [ { "id": "Q9SKL4", "url": "https://omabrowser.org/oma/group/Q9SKL4/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 3, "go_terms": [ { "name": "Golgi membrane", "id": "GO:0000139", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000139", "evidence": [ { "database": "UniProtKB", "id": "Q9SKL4", "url": 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"NP_178429", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_178429" }, { "id": "Q9SKM4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SKM4" } ] } ], "protein_names": [ { "name": "Toll-Interleukin-Resistance (TIR) domain family protein", "type": "synonym", "evidence": [ { "id": "NP_178429", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_178429" }, { "id": "Q9SKM4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SKM4/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9SKM4", "url": "https://www.uniprot.org/uniprotkb/Q9SKM4" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "ATTX12", "url": "https://www.uniprot.org/uniprotkb/Q9SKM4", "locus": {} } ], "crossref": [ { "id": "AT2G03300", "url": "https://bar.utoronto.ca/thalemine/portal.do?externalids=AT2G03300", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "814859", "url": "https://www.ncbi.nlm.nih.gov/gene/814859", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR000157", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000157", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR035897", "url": "https://www.ebi.ac.uk/interpro/entry/IPR035897", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT2G03300", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT2G03300", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "HEINFFV", "url": "https://omabrowser.org/oma/group/HEINFFV/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR32009", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR32009", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR32009:SF63", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR32009:SF63", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF01582", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF01582", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_178429", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_178429", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT2G03300", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT2G03300", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9SKM4", "url": "https://www.uniprot.org/uniprotkb/Q9SKM4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9SKM4-1", "url": "https://www.uniprot.org/uniprotkb/Q9SKM4-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MTFFSPTQVFLNYRGEQLRRSFVSHLIDAFERNEINFFVDKYEQRGKDLKNLFLRIQESKIALAIFSTRYTESSWCMDELVKIKKLADKRKLHVIPIFYKVKVEDVRKQTGEFGDNFWTLAKVSSGDQIKKWKEALECIPNKMGLSLGDKSDEADFIKEVVKAVQCVVATIGLEEEENHFGKKKRKDCKCELPDLKKSRTKKL", "length": 203, "header": "tr|Q9SKM4-1|Q9SKM4_ARATH Isoform 1 of Toll-Interleukin-Resistance (TIR) domain family protein OS=Arabidopsis thaliana OX=3702 GN=ATTX12 PE=4 SV=1 CANONICAL=Q9SKM4-1" }, "isoforms": [ { "isoform_ac": "Q9SKM4-1", "url": "https://www.uniprot.org/uniprotkb/Q9SKM4/entry", "sequence": { "sequence": "MTFFSPTQVFLNYRGEQLRRSFVSHLIDAFERNEINFFVDKYEQRGKDLKNLFLRIQESKIALAIFSTRYTESSWCMDELVKIKKLADKRKLHVIPIFYKVKVEDVRKQTGEFGDNFWTLAKVSSGDQIKKWKEALECIPNKMGLSLGDKSDEADFIKEVVKAVQCVVATIGLEEEENHFGKKKRKDCKCELPDLKKSRTKKL", "length": 203, "header": "tr|Q9SKM4-1|Q9SKM4_ARATH Isoform 1 of Toll-Interleukin-Resistance (TIR) domain family protein OS=Arabidopsis thaliana OX=3702 GN=ATTX12 PE=4 SV=1 CANONICAL=Q9SKM4-1" }, "locus": { "chromosome": "2", "start_pos": 1003468, "end_pos": 1004222, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT2G03300.1", "url": "https://www.ensemblgenomes.org/id/AT2G03300.1" }, { "database": "Ensembl Peptide", "id": "AT2G03300.1", "url": "https://www.ensemblgenomes.org/id/AT2G03300.1" } ] } } ], "glycosylation": [], "phosphorylation": [ { "start_pos": 151, "end_pos": 151, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SKM4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SKM4" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" } ], "site_lbl": "Ser151" } ], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "1999", "authors": "Lin X, Kaul S, Rounsley S, Shea T P, Benito M I, Town C D, Fujii C Y, Mason T, Bowman C L, Barnstead M, Feldblyum T V, Buell C R, Ketchum K A, Lee J, Ronning C M, Koo H L, Moffat K S, Cronin L A, Shen M, Pai G, Van Aken S, Umayam L, Tallon L J, Gill J E, Adams M D, Carrera A J, Creasy T H, Goodman H M, Somerville C R, Copenhaver G P, Preuss D, Nierman W C, White O, Eisen J A, Salzberg S L, Fraser C M, Venter J C", "evidence": [ { "database": "UniProtKB", "id": "Q9SKM4", "url": "https://www.uniprot.org/uniprotkb/Q9SKM4" } ], "reference": [ { "type": "PubMed", "id": "10617197", "url": "https://glygen.org/publication/PubMed/10617197" } ] }, { "title": "Genetics and phosphoproteomics reveal a protein phosphorylation network in the abscisic acid signaling pathway in Arabidopsis thaliana.", "journal": "Science signaling", "date": "2013-04-09", "authors": "Umezawa Taishi, Sugiyama Naoyuki, Takahashi Fuminori, Anderson Jeffrey C, Ishihama Yasushi, Peck Scott C, Shinozaki Kazuo", "evidence": [ { "database": "iPTMnet", "id": "Q9SKM4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SKM4" } ], "reference": [ { "type": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9SKM4", "url": "https://www.uniprot.org/uniprotkb/Q9SKM4" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT2G03300", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT2G03300", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q9SKM4", "url": "https://www.uniprot.org/uniprotkb/Q9SKM4" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "Q9SKM4", "url": "https://www.uniprot.org/uniprotkb/Q9SKM4" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 3, "go_terms": [ { "name": "defense response", "id": "GO:0006952", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006952", "evidence": [ { "database": "UniProtKB", "id": "Q9SKM4", "url": "https://www.uniprot.org/uniprotkb/Q9SKM4" } ], "pmid": "" }, { "name": "signal transduction", "id": "GO:0007165", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007165", "evidence": [ { "database": "UniProtKB", "id": "Q9SKM4", "url": "https://www.uniprot.org/uniprotkb/Q9SKM4" } ], "pmid": "" }, { "name": "positive regulation of cellular defense response", "id": "GO:0010186", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010186", "evidence": [ { "database": "UniProtKB", "id": "Q9SKM4", "url": "https://www.uniprot.org/uniprotkb/Q9SKM4" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "Q9SKM4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SKM4" }, { "id": "PS50104", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50104" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "TIR", "eco_id": "ECO_0000259", "start_pos": 5, "end_pos": 168, "start_aa": "Ser", "end_aa": "Val", "glycosite_overlap": [] } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [ 151 ], "sequon_annotation_sites": [] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 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"MQAVQKAPEGTPAAGGMFVVIVHSAEDVEGKHHTNPYVHIYFKGEERKTKHVKKNKDPKWNEEFSFMLEEPPIHEKMHVKVFSTSSRIVFVLRCASVEAAYVPFEGIKPRGAKLFSDGSACSKGFGDTTSFGDMALLGGMAIMLAHHDEGVLTCHVMVRESFEEINMAWRAWKLVRQGAGSSGSWFVRRRFVRELVRQEAVRQGAGLSGSRFVKEPVRQGAGSSGVGVWPLKSQGRPSDLRFFLKSTFSSFKFHDHYKIIK", "length": 261, "header": "tr|Q9SKQ7-1|Q9SKQ7_ARATH Isoform 1 of Calcium-dependent lipid-binding (CaLB domain) family protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=2 CANONICAL=Q9SKQ7-1" }, "isoforms": [ { "isoform_ac": "Q9SKQ7-1", "url": "https://www.uniprot.org/uniprotkb/Q9SKQ7/entry", "sequence": { "sequence": "MQAVQKAPEGTPAAGGMFVVIVHSAEDVEGKHHTNPYVHIYFKGEERKTKHVKKNKDPKWNEEFSFMLEEPPIHEKMHVKVFSTSSRIVFVLRCASVEAAYVPFEGIKPRGAKLFSDGSACSKGFGDTTSFGDMALLGGMAIMLAHHDEGVLTCHVMVRESFEEINMAWRAWKLVRQGAGSSGSWFVRRRFVRELVRQEAVRQGAGLSGSRFVKEPVRQGAGSSGVGVWPLKSQGRPSDLRFFLKSTFSSFKFHDHYKIIK", "length": 261, "header": "tr|Q9SKQ7-1|Q9SKQ7_ARATH Isoform 1 of Calcium-dependent lipid-binding (CaLB domain) family protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=2 CANONICAL=Q9SKQ7-1" }, "locus": { "chromosome": "2", "start_pos": 9026157, "end_pos": 9027310, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT2G21040.1", "url": "https://www.ensemblgenomes.org/id/AT2G21040.1" }, { "database": "Ensembl Peptide", "id": "AT2G21040.1", "url": "https://www.ensemblgenomes.org/id/AT2G21040.1" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "other", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 11, "start_aa": "Thr", "end_pos": 11, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr11", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ], "filter_code": "000000000000000010000.00000000001000.0.01000" } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "1999", "authors": "Lin X, Kaul S, Rounsley S, Shea T P, Benito M I, Town C D, Fujii C Y, Mason T, Bowman C L, Barnstead M, Feldblyum T V, Buell C R, Ketchum K A, Lee J, Ronning C M, Koo H L, Moffat K S, Cronin L A, Shen M, Pai G, Van Aken S, Umayam L, Tallon L J, Gill J E, Adams M D, Carrera A J, Creasy T H, Goodman H M, Somerville C R, Copenhaver G P, Preuss D, Nierman W C, White O, Eisen J A, Salzberg S L, Fraser C M, Venter J C", "evidence": [ { "database": "UniProtKB", "id": "Q9SKQ7", "url": "https://www.uniprot.org/uniprotkb/Q9SKQ7" } ], "reference": [ { "type": "PubMed", "id": "10617197", "url": "https://glygen.org/publication/PubMed/10617197" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9SKQ7", "url": "https://www.uniprot.org/uniprotkb/Q9SKQ7" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT2G21040", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT2G21040", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "endoplasmic reticulum", "id": "GO:0005783", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005783", "evidence": [ { "database": "UniProtKB", "id": "Q9SKQ7", "url": "https://www.uniprot.org/uniprotkb/Q9SKQ7" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "lipid binding", "id": "GO:0008289", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008289", "evidence": [ { "database": "UniProtKB", "id": "Q9SKQ7", "url": "https://www.uniprot.org/uniprotkb/Q9SKQ7" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "Q9SKQ7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SKQ7" }, { "id": "PS50004", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50004" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "C2", "eco_id": "ECO_0000259", "start_pos": 1, "end_pos": 117, "start_aa": "Met", "end_aa": "Asp", "glycosite_overlap": [] } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [ 11 ], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 1 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 1 }, { "field": "exact_o_linked_sites", "count": 1 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 1 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 1 }, { "field": "exact_o_linked_sites", "count": 1 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "Q9SKR5-1", "uniprot_ac": "Q9SKR5", "uniprot_id": "Q9SKR5_ARATH", "mass": { "chemical_mass": 84863.0, "monoisotopic_mass": 84863.0 }, "refseq": { "ac": "NP_001323930", "name": "phospholipase-like protein (PEARLI 4) family protein", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001323930" }, "gene_names": [ { "name": "PEARLI4", "type": "recommended", "evidence": [ { "id": "Q9SKR5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SKR5" } ] }, { "name": "F26H11.28", "type": "synonym", "evidence": [ { "id": "NP_001323930", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001323930" }, { "id": "Q9SKR5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SKR5" } ] }, { "name": "F26H11_28", "type": "synonym", "evidence": [ { "id": "NP_001323930", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001323930" }, { "id": "Q9SKR5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SKR5" } ] }, { "name": "pEARLI4", "type": "synonym", "evidence": [ { "id": "NP_001323930", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001323930" }, { "id": "Q9SKR5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SKR5" } ] } ], "protein_names": [ { "name": "Phospholipase-like protein (PEARLI 4) family protein", "type": "synonym", "evidence": [ { "id": "Q9SKR5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SKR5/entry#names_and_taxonomy" } ] }, { "name": "phospholipase-like protein (PEARLI 4) family protein", "type": "synonym", "evidence": [ { "id": "NP_001323930", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001323930" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9SKR5", "url": "https://www.uniprot.org/uniprotkb/Q9SKR5" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "PEARLI4", "url": "https://www.uniprot.org/uniprotkb/Q9SKR5", "locus": {} } ], "crossref": [ { "id": "AT2G20960", "url": "https://bar.utoronto.ca/thalemine/portal.do?externalids=AT2G20960", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "816630", "url": "https://www.ncbi.nlm.nih.gov/gene/816630", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR007942", "url": "https://www.ebi.ac.uk/interpro/entry/IPR007942", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT2G20960", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT2G20960", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "HEMSVME", "url": "https://omabrowser.org/oma/group/HEMSVME/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR35358", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR35358", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR35358:SF13", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR35358:SF13", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF05278", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF05278", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_001323930", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001323930", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT2G20960", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT2G20960", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "A0A1P8AYH5", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AYH5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A1P8AYH5-1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AYH5-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A1P8AYN4", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AYN4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A1P8AYN4-1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AYN4-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9SKR5", "url": "https://www.uniprot.org/uniprotkb/Q9SKR5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9SKR5-1", "url": "https://www.uniprot.org/uniprotkb/Q9SKR5-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MELVSGKVVPGCSNAGNPFHECTAICFERVNSPDVHKKEKKLFGFGKRTPSRDQTPPASPARGSRSPLASYFAKKKVESSAESSPSSYDHTNGNFLSRLSPLQGRKIEPSSNVDSLPVSPSLALYSGGDYFARRADQRGDEDDDVSPRPFGTQPKTPEHPLRTPQHRPRTPQHRSAHQEDAFSLETRPRTPERRSNTSDTRPRTPIHESAATGRRPQTPETRPRTPDHRYATYDNRPRTPIHESAATERRPQTPETRPRTPEHRSAIPDTRPRTPIHESAATGRRPQTPETRPRTAQRRGRSPEFMERSPGPRSKTPEPQPTYFEPSSRTPKQRSKTPEPSPRIPQTQPMSHRSLDNAALKMPRTVETRPRTPEHQPRTVETKPRIHESRPKTAVYGGRSPDHREKISQEMGQRSSHAYNYLGSKAESVYIEKNEESVLLFPELILSPQERPPSRLITLNHRGYETPNKQKEHCDEMDDSASTDDDKFSFVDDHDEHTVSIYAETTSKSGSSEQEEQHKANNEPPELPDESQSFSLAEISRMKGIITNNEIRDVMQSILSESYVSVGQYKVRASVSTTLQHILQKHGDIASGSKLQSLATRSYYLDMLASVVFELQTTPLKYLKESRVVEMVAIVKDIESVKIKAGWLKPVLEEIVEAVKHYDEHKMSVVEKEVWERDVLLAKQETEKQVKELGEKEKKIKEWRAKMTEMAAKLGDLDMKRARLHKSFTFLSSKVDKFQGKPLLQGIL", "length": 748, "header": "tr|Q9SKR5-1|Q9SKR5_ARATH Isoform 1 of Phospholipase-like protein (PEARLI 4) family protein OS=Arabidopsis thaliana OX=3702 GN=PEARLI4 PE=1 SV=1 CANONICAL=Q9SKR5-1" }, "isoforms": [ { "isoform_ac": "A0A1P8AYH5-1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AYH5/entry", "sequence": { "sequence": "MELVSGKVVPGCSNAGNPFHECTAICFERVNSPDVHKKEKKLFGFGKRTPSRDQTPPASPARGSRSPLASYFAKKKVESSAESSPSSYDHTNGNFLSRLSPLQGRKIEPSSNVDSLPVSPSLALYSGGDYFARRADQRGDEDDDVSPRPFGTQPKTPEHPLRTPQHRPRTPQHRSAHQEDAFSLETRPRTPERRSNTSDTRPRTPIHESAATGRRPQTPETRPRTPDHRYATYDNRPRTPIHESAATERRPQTPETRPRTAQRRGRSPEFMERSPGPRSKTPEPQPTYFEPSSRTPKQRSKTPEPSPRIPQTQPMSHRSLDNAALKMPRTVETRPRTPEHQPRTVETKPRIHESRPKTAVYGGRSPDHREKISQEMGQRSSHAYNYLGSKAESVYIEKNEESVLLFPELILSPQERPPSRLITLNHRGYETPNKQKEHCDEMDDSASTDDDKFSFVDDHDEHTVSIYAETTSKSGSSEQEEQHKANNEPPELPDESQSFSLAEISRMKGIITNNEIRDVMQSILSESYVSVGQYKVRASVSTTLQHILQKHGDIASGSKLQSLATRSYYLDMLASVVFELQTTPLKYLKESRVVEMVAIVKDIESVKIKAGWLKPVLEEIVEAVKHYDEHKMSVVEKEVWERDVLLAKQETEKQVKELGEKEKKIKEWRAKMTEMAAKLGDLDMKRARLHKSFTFLSSKVDKFQGKPLLQGIL", "length": 713, "header": "tr|A0A1P8AYH5-1|A0A1P8AYH5_ARATH Computationally mapped isoform of Phospholipase-like protein (PEARLI 4) family protein OS=Arabidopsis thaliana OX=3702 GN=PEARLI4 PE=1 SV=1 CANONICAL=Q9SKR5-1" }, "locus": { "chromosome": "2", "start_pos": 9006610, "end_pos": 9009794, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT2G20960.2", "url": "https://www.ensemblgenomes.org/id/AT2G20960.2" }, { "database": "Ensembl Peptide", "id": "AT2G20960.2", "url": "https://www.ensemblgenomes.org/id/AT2G20960.2" } ] } }, { "isoform_ac": "A0A1P8AYN4-1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AYN4/entry", "sequence": { "sequence": "MELVSGKVVPGCSNAGNPFHECTAICFERVNSPDVHKKEKKLFGFGKRTPSRDQTPPASPARGSRSPLASYFAKKKVESSAESSPSSYDHTNGNFLSRLSPLQGRKIEPSSNVDSLPVSPSLALYSGGDYFARRADQRGDEDDDVSPRPFGTQPKTPEHPLRTPQHRPRTPQHRSAHQEDAFSLETRPRTPEHRSAIPDTRPRTPIHESAATGRRPQTPETRPRTAQRRGRSPEFMERSPGPRSKTPEPQPTYFEPSSRTPKQRSKTPEPSPRIPQTQPMSHRSLDNAALKMPRTVETRPRTPEHQPRTVETKPRIHESRPKTAVYGGRSPDHREKISQEMGQRSSHAYNYLGSKAESVYIEKNEESVLLFPELILSPQERPPSRLITLNHRGYETPNKQKEHCDEMDDSASTDDDKFSFVDDHDEHTVSIYAETTSKSGSSEQEEQHKANNEPPELPDESQSFSLAEISRMKGIITNNEIRDVMQSILSESYVSVGQYKVRASVSTTLQHILQKHGDIASGSKLQSLATRSYYLDMLASVVFELQTTPLKYLKESRVVEMVAIVKDIESVKIKAGWLKPVLEEIVEAVKHYDEHKMSVVEKEVWERDVLLAKQETEKQVKELGEKEKKIKEWRAKMTEMAAKLGDLDMKRARLHKSFTFLSSKVDKFQGKPLLQGIL", "length": 678, "header": "tr|A0A1P8AYN4-1|A0A1P8AYN4_ARATH Computationally mapped isoform of Phospholipase-like protein (PEARLI 4) family protein OS=Arabidopsis thaliana OX=3702 GN=PEARLI4 PE=1 SV=1 CANONICAL=Q9SKR5-1" }, "locus": { "chromosome": "2", "start_pos": 9006610, "end_pos": 9009790, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT2G20960.3", "url": "https://www.ensemblgenomes.org/id/AT2G20960.3" }, { "database": "Ensembl Peptide", "id": "AT2G20960.3", "url": "https://www.ensemblgenomes.org/id/AT2G20960.3" } ] } }, { "isoform_ac": "Q9SKR5-1", "url": "https://www.uniprot.org/uniprotkb/Q9SKR5/entry", "sequence": { "sequence": "MELVSGKVVPGCSNAGNPFHECTAICFERVNSPDVHKKEKKLFGFGKRTPSRDQTPPASPARGSRSPLASYFAKKKVESSAESSPSSYDHTNGNFLSRLSPLQGRKIEPSSNVDSLPVSPSLALYSGGDYFARRADQRGDEDDDVSPRPFGTQPKTPEHPLRTPQHRPRTPQHRSAHQEDAFSLETRPRTPERRSNTSDTRPRTPIHESAATGRRPQTPETRPRTPDHRYATYDNRPRTPIHESAATERRPQTPETRPRTPEHRSAIPDTRPRTPIHESAATGRRPQTPETRPRTAQRRGRSPEFMERSPGPRSKTPEPQPTYFEPSSRTPKQRSKTPEPSPRIPQTQPMSHRSLDNAALKMPRTVETRPRTPEHQPRTVETKPRIHESRPKTAVYGGRSPDHREKISQEMGQRSSHAYNYLGSKAESVYIEKNEESVLLFPELILSPQERPPSRLITLNHRGYETPNKQKEHCDEMDDSASTDDDKFSFVDDHDEHTVSIYAETTSKSGSSEQEEQHKANNEPPELPDESQSFSLAEISRMKGIITNNEIRDVMQSILSESYVSVGQYKVRASVSTTLQHILQKHGDIASGSKLQSLATRSYYLDMLASVVFELQTTPLKYLKESRVVEMVAIVKDIESVKIKAGWLKPVLEEIVEAVKHYDEHKMSVVEKEVWERDVLLAKQETEKQVKELGEKEKKIKEWRAKMTEMAAKLGDLDMKRARLHKSFTFLSSKVDKFQGKPLLQGIL", "length": 748, "header": "tr|Q9SKR5-1|Q9SKR5_ARATH Isoform 1 of Phospholipase-like protein (PEARLI 4) family protein OS=Arabidopsis thaliana OX=3702 GN=PEARLI4 PE=1 SV=1 CANONICAL=Q9SKR5-1" }, "locus": { "chromosome": "2", "start_pos": 9006743, "end_pos": 9009777, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT2G20960.4", "url": "https://www.ensemblgenomes.org/id/AT2G20960.4" }, { "database": "Ensembl Peptide", "id": "AT2G20960.4", "url": "https://www.ensemblgenomes.org/id/AT2G20960.4" } ] } } ], "glycosylation": [ { "glytoucan_ac": "G49108TO", "type": "O-linked", "subtype": "O-GlcNAcylation", "prediction_tool_list": [], "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "", "relation": "attached", "comment": "O-GlcNAcylation", "icn3d_view": {}, "evidence": [ { "id": "28154133", "database": "PubMed", "url": "https://glygen.org/publication/PubMed/28154133" }, { "id": "Q9SKR5", "database": "O-GlcNAc Database", "url": "https://www.oglcnac.mcw.edu/search/?query_protein=Q9SKR5" } ], "filter_code": "000000000000000000000.xxxxxxx.00000001000000.xxxxxxx.xxxxxxxxxx.xxxxxxxxxxxxxxxxxx.xxxxx.01000" } ], "phosphorylation": [ { "start_pos": 100, 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abscisic acid signaling pathway in Arabidopsis thaliana.", "journal": "Science signaling", "date": "2013-04-09", "authors": "Umezawa Taishi, Sugiyama Naoyuki, Takahashi Fuminori, Anderson Jeffrey C, Ishihama Yasushi, Peck Scott C, Shinozaki Kazuo", "evidence": [ { "database": "iPTMnet", "id": "Q9SL91", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SL91" } ], "reference": [ { "type": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" } ] }, { "title": "Quantitative measurement of phosphoproteome response to osmotic stress in arabidopsis based on Library-Assisted eXtracted Ion Chromatogram (LAXIC).", "journal": "Molecular & cellular proteomics : MCP", "date": "2013-08", "authors": "Xue Liang, Wang Pengcheng, Wang Lianshui, Renzi Emily, Radivojac Predrag, Tang Haixu, Arnold Randy, Zhu Jian-Kang, Tao W Andy", "evidence": [ { "database": "iPTMnet", "id": "Q9SL91", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SL91" } ], 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Library-Assisted eXtracted Ion Chromatogram (LAXIC).", "journal": "Molecular & cellular proteomics : MCP", "date": "2013-08", "authors": "Xue Liang, Wang Pengcheng, Wang Lianshui, Renzi Emily, Radivojac Predrag, Tang Haixu, Arnold Randy, Zhu Jian-Kang, Tao W Andy", "evidence": [ { "database": "iPTMnet", "id": "Q9SL96", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SL96" } ], "reference": [ { "type": "PubMed", "id": "23660473", "url": "https://glygen.org/publication/PubMed/23660473" } ] }, { "title": "Quantitative phosphoproteomics identifies SnRK2 protein kinase substrates and reveals the effectors of abscisic acid action.", "journal": "Proceedings of the National Academy of Sciences of the United States of America", "date": "2013-07-02", "authors": "Wang Pengcheng, Xue Liang, Batelli Giorgia, Lee Shinyoung, Hou Yueh-Ju, Van Oosten Michael J, Zhang Huiming, Tao W Andy, Zhu Jian-Kang", "evidence": [ { "database": "iPTMnet", "id": "Q9SL96", "url": 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Lorenzo Giulia", "evidence": [ { "database": "iPTMnet", "id": "Q9SL96", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SL96" } ], "reference": [ { "type": "PubMed", "id": "27532006", "url": "https://glygen.org/publication/PubMed/27532006" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9SL96", "url": "https://www.uniprot.org/uniprotkb/Q9SL96" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] }, { "title": "Protein Phosphatase 2Cs and Microtubule-Associated Stress Protein 1 Control Microtubule Stability, Plant Growth, and Drought Response.", "journal": "The Plant cell", "date": "2017-01", "authors": "Bhaskara Govinal Badiger, Wen Tuan-Nan, 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"type": "synonym", "evidence": [ { "id": "Q9SLA4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SLA4" } ] }, { "name": "F3N11_4", "type": "synonym", "evidence": [ { "id": "Q9SLA4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SLA4" } ] } ], "protein_names": [ { "name": "Plant Tudor-like protein", "type": "synonym", "evidence": [ { "id": "Q9SLA4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SLA4/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9SLA4", "url": "https://www.uniprot.org/uniprotkb/Q9SLA4" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9SLA4", "locus": {} } ], "crossref": [ { "id": "AT2G25590", "url": "https://bar.utoronto.ca/thalemine/portal.do?externalids=AT2G25590", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "817098", "url": "https://www.ncbi.nlm.nih.gov/gene/817098", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR008395", "url": "https://www.ebi.ac.uk/interpro/entry/IPR008395", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR014002", "url": "https://www.ebi.ac.uk/interpro/entry/IPR014002", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT2G25590", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT2G25590", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "PTHR31917", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31917", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR31917:SF146", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31917:SF146", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF05641", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF05641", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "AT2G25590", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT2G25590", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9SLA4", "url": "https://www.uniprot.org/uniprotkb/Q9SLA4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9SLA4-1", "url": "https://www.uniprot.org/uniprotkb/Q9SLA4-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MRFRRGSRVEVFSIKEASYGVWRSAEIISGNGHTYNVRYYSFEIANNEVVEDRVPRKIIRPCPPQVDVDRWEAGELVEVLDNNISWKTATVLEVLSGRYYVVRLLGAKAELTVHKVYLRARQSWQDERWVMIGKETSVASLRVLKRPSPCDWAESAESCTRSPKKIRSLEEEGHQHRFASSSAQKVYNDSSERRGVELYVKASCNENKSGFRQMVRMVPTLVVVMLNLQKKHLDAEMKLGENIHYQPKDNHLQSAGWISLPTIANVTSRLWNCPCLFVGGICTVGLVIKIYRKVLNFYEIKAMTFQAELPSLKKLKRLREEEEALRIAMFLCHHYRFYIRLYSTLRKIIELNISDSLELMLIQNFMVVTKLMNNIMICINL", "length": 381, "header": "tr|Q9SLA4-1|Q9SLA4_ARATH Isoform 1 of Plant Tudor-like protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9SLA4-1" }, "isoforms": [ { "isoform_ac": "Q9SLA4-1", "url": "https://www.uniprot.org/uniprotkb/Q9SLA4/entry", "sequence": { "sequence": "MRFRRGSRVEVFSIKEASYGVWRSAEIISGNGHTYNVRYYSFEIANNEVVEDRVPRKIIRPCPPQVDVDRWEAGELVEVLDNNISWKTATVLEVLSGRYYVVRLLGAKAELTVHKVYLRARQSWQDERWVMIGKETSVASLRVLKRPSPCDWAESAESCTRSPKKIRSLEEEGHQHRFASSSAQKVYNDSSERRGVELYVKASCNENKSGFRQMVRMVPTLVVVMLNLQKKHLDAEMKLGENIHYQPKDNHLQSAGWISLPTIANVTSRLWNCPCLFVGGICTVGLVIKIYRKVLNFYEIKAMTFQAELPSLKKLKRLREEEEALRIAMFLCHHYRFYIRLYSTLRKIIELNISDSLELMLIQNFMVVTKLMNNIMICINL", "length": 381, "header": "tr|Q9SLA4-1|Q9SLA4_ARATH Isoform 1 of Plant Tudor-like protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9SLA4-1" }, "locus": { "chromosome": "2", "start_pos": 10890903, "end_pos": 10893772, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT2G25590.1", "url": "https://www.ensemblgenomes.org/id/AT2G25590.1" }, { "database": "Ensembl Peptide", "id": "AT2G25590.1", "url": "https://www.ensemblgenomes.org/id/AT2G25590.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "1999", "authors": "Lin X, Kaul S, Rounsley S, Shea T P, Benito M I, Town C D, Fujii C Y, Mason T, Bowman C L, Barnstead M, Feldblyum T V, Buell C R, Ketchum K A, Lee J, Ronning C M, Koo H L, Moffat K S, Cronin L A, Shen M, Pai G, Van Aken S, Umayam L, Tallon L J, Gill J E, Adams M D, Carrera A J, Creasy T H, Goodman H M, Somerville C R, Copenhaver G P, Preuss D, Nierman W C, White O, Eisen J A, Salzberg S L, Fraser C M, Venter J C", "evidence": [ { "database": "UniProtKB", "id": "Q9SLA4", "url": "https://www.uniprot.org/uniprotkb/Q9SLA4" } ], "reference": [ { "type": "PubMed", "id": "10617197", "url": "https://glygen.org/publication/PubMed/10617197" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9SLA4", "url": "https://www.uniprot.org/uniprotkb/Q9SLA4" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT2G25590", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT2G25590", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": {}, "pro_annotation": [], "site_annotation": [ { "start_pos": 188, "end_pos": 190, "annotation": "n_glycosylation_sequon" }, { "start_pos": 207, "end_pos": 209, "annotation": "n_glycosylation_sequon" }, { "start_pos": 265, "end_pos": 267, "annotation": "n_glycosylation_sequon" }, { "start_pos": 352, "end_pos": 354, "annotation": "n_glycosylation_sequon" }, { "start_pos": 83, "end_pos": 85, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], 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"title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "Q9SLC2-1", "uniprot_ac": "Q9SLC2", "uniprot_id": "Q9SLC2_ARATH", "mass": { "chemical_mass": 82431.0, "monoisotopic_mass": 82431.0 }, "refseq": { "ac": "NP_181766", "name": "uncharacterized protein", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_181766" }, "gene_names": [ { "name": "MHK10.9", "type": "recommended", "evidence": [ { "id": "Q9SLC2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SLC2" } ] }, { "name": "MHK10.9", "type": "synonym", "evidence": [ { "id": "NP_181766", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_181766" } ] }, { "name": "MHK10_9", "type": "synonym", "evidence": [ { "id": "NP_181766", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_181766" }, { "id": "Q9SLC2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SLC2" } ] } ], "protein_names": [ { 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"Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "818838", "url": "https://www.ncbi.nlm.nih.gov/gene/818838", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "ath:AT2G42370", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT2G42370", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "FRIMVNR", "url": "https://omabrowser.org/oma/group/FRIMVNR/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR35120", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR35120", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR35120:SF2", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR35120:SF2", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "NP_181766", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_181766", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT2G42370", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT2G42370", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9SLC2", "url": "https://www.uniprot.org/uniprotkb/Q9SLC2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9SLC2-1", "url": "https://www.uniprot.org/uniprotkb/Q9SLC2-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MDPPANPFASREQDTVTILRNLIKQATLEEEVSEASETHSVPNKIRILESVSDEMRKSQENGSDQKQLSEEDEIDILDSKAMSFSFSCHGGGPKRKKCNDKKRKQQEEKSKKKLKVLVETLKLVPFKPLKTLDFACYESLLKTLGLWDFVHLEFDQDMDYDLVAQLIASYSAGGKCSYINGSRIKLSRADLARSLKLPNKKERVVILDEDKEFLESDESISVVEDVISNWMLLHCDDAWMMPDEVVEWMKGIKKKQLDKLDWAGLMWFMVEKELKAEPPLGDCFYASHLQMVIRSQKIDLFKERDLKVKDDIAALNLGMDDGATDSKKENCVEESTTKLNLGQVIVSEMAATMELYHEEQAIDLEENKEQPMDLKEAKEEGDEMEWRQPYEKNGTRHRKVGENEILEDEIEKDGEKQEGGFLLFRNGKTLHQENLMLGDTSTLGYNSGLQVHGSSTCDFLAPRAVMHMVPGRSHFGNDNKREFGHENDISYHFDNPASTKRLKTPSWDDKPVPFDICMEQIKHLADKAKLSYVEKDQACGESNMREQMLQNELQRREDIIQQLHKESYEELHKKNVEIYKLENELRMMTSVLAWYQKALKESQKACRKHRKVCPLLDKPIYIDVKGTGGLVLSTAEIEKLRLKEEKEEGMRRVLIERQVKEVGSLWIKEYEVNLKKKVELLDGKLIGFQNKMKLLKETISRRESISARFDATSNT", "length": 715, "header": "tr|Q9SLC2-1|Q9SLC2_ARATH Isoform 1 of Uncharacterized protein OS=Arabidopsis thaliana OX=3702 GN=MHK10.9 PE=1 SV=1 CANONICAL=Q9SLC2-1" }, "isoforms": [ { "isoform_ac": "Q9SLC2-1", "url": "https://www.uniprot.org/uniprotkb/Q9SLC2/entry", "sequence": { "sequence": "MDPPANPFASREQDTVTILRNLIKQATLEEEVSEASETHSVPNKIRILESVSDEMRKSQENGSDQKQLSEEDEIDILDSKAMSFSFSCHGGGPKRKKCNDKKRKQQEEKSKKKLKVLVETLKLVPFKPLKTLDFACYESLLKTLGLWDFVHLEFDQDMDYDLVAQLIASYSAGGKCSYINGSRIKLSRADLARSLKLPNKKERVVILDEDKEFLESDESISVVEDVISNWMLLHCDDAWMMPDEVVEWMKGIKKKQLDKLDWAGLMWFMVEKELKAEPPLGDCFYASHLQMVIRSQKIDLFKERDLKVKDDIAALNLGMDDGATDSKKENCVEESTTKLNLGQVIVSEMAATMELYHEEQAIDLEENKEQPMDLKEAKEEGDEMEWRQPYEKNGTRHRKVGENEILEDEIEKDGEKQEGGFLLFRNGKTLHQENLMLGDTSTLGYNSGLQVHGSSTCDFLAPRAVMHMVPGRSHFGNDNKREFGHENDISYHFDNPASTKRLKTPSWDDKPVPFDICMEQIKHLADKAKLSYVEKDQACGESNMREQMLQNELQRREDIIQQLHKESYEELHKKNVEIYKLENELRMMTSVLAWYQKALKESQKACRKHRKVCPLLDKPIYIDVKGTGGLVLSTAEIEKLRLKEEKEEGMRRVLIERQVKEVGSLWIKEYEVNLKKKVELLDGKLIGFQNKMKLLKETISRRESISARFDATSNT", "length": 715, "header": "tr|Q9SLC2-1|Q9SLC2_ARATH Isoform 1 of Uncharacterized protein OS=Arabidopsis thaliana OX=3702 GN=MHK10.9 PE=1 SV=1 CANONICAL=Q9SLC2-1" }, "locus": { "chromosome": "2", "start_pos": 17643334, "end_pos": 17645533, "strand": "+", "evidence": [ { 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P K, Rizzo M, Rooney T, Rowley D, Sakano H, Salzberg S L, Schwartz J R, Shinn P, Southwick A M, Sun H, Tallon L J, Tambunga G, Toriumi M J, Town C D, Utterback T, Van Aken S, Vaysberg M, Vysotskaia V S, Walker M, Wu D, Yu G, Fraser C M, Venter J C, Davis R W", "evidence": [ { "database": "UniProtKB", "id": "Q9SLH9", "url": "https://www.uniprot.org/uniprotkb/Q9SLH9" } ], "reference": [ { "type": "PubMed", "id": "11130712", "url": "https://glygen.org/publication/PubMed/11130712" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9SLH9", "url": "https://www.uniprot.org/uniprotkb/Q9SLH9" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": 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G, Peterson J, Pham P K, Rizzo M, Rooney T, Rowley D, Sakano H, Salzberg S L, Schwartz J R, Shinn P, Southwick A M, Sun H, Tallon L J, Tambunga G, Toriumi M J, Town C D, Utterback T, Van Aken S, Vaysberg M, Vysotskaia V S, Walker M, Wu D, Yu G, Fraser C M, Venter J C, Davis R W", "evidence": [ { "database": "UniProtKB", "id": "Q9SLI0", "url": "https://www.uniprot.org/uniprotkb/Q9SLI0" } ], "reference": [ { "type": "PubMed", "id": "11130712", "url": "https://glygen.org/publication/PubMed/11130712" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9SLI0", "url": "https://www.uniprot.org/uniprotkb/Q9SLI0" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], 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Li-Fei, Ye Mingliang, Zou Hanfa, Sun Samuel Sai-Ming, He Jun-Xian", "evidence": [ { "database": "iPTMnet", "id": "Q9SLM4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SLM4" } ], "reference": [ { "type": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" } ] }, { "title": "Quantitative phosphoproteomics after auxin-stimulated lateral root induction identifies an SNX1 protein phosphorylation site required for growth.", "journal": "Molecular & cellular proteomics : MCP", "date": "2013-05", "authors": "Zhang Hongtao, Zhou Houjiang, Berke Lidija, Heck Albert J R, Mohammed Shabaz, Scheres Ben, Menke Frank L H", "evidence": [ { "database": "iPTMnet", "id": "Q9SLM4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SLM4" } ], "reference": [ { "type": "PubMed", "id": "23328941", "url": "https://glygen.org/publication/PubMed/23328941" } ] }, { "title": "Genetics and phosphoproteomics reveal a protein phosphorylation network in the abscisic acid signaling pathway in Arabidopsis thaliana.", "journal": "Science signaling", "date": "2013-04-09", "authors": "Umezawa Taishi, Sugiyama Naoyuki, Takahashi Fuminori, Anderson Jeffrey C, Ishihama Yasushi, Peck Scott C, Shinozaki Kazuo", "evidence": [ { "database": "iPTMnet", "id": "Q9SLM4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SLM4" } ], "reference": [ { "type": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" } ] }, { "title": "Quantitative measurement of phosphoproteome response to osmotic stress in arabidopsis based on Library-Assisted eXtracted Ion Chromatogram (LAXIC).", "journal": "Molecular & cellular proteomics : MCP", "date": "2013-08", "authors": "Xue Liang, Wang Pengcheng, Wang Lianshui, Renzi Emily, Radivojac Predrag, Tang Haixu, Arnold Randy, Zhu Jian-Kang, Tao W Andy", "evidence": [ { "database": "iPTMnet", "id": "Q9SLM4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SLM4" } ], "reference": [ { "type": "PubMed", "id": "23660473", "url": "https://glygen.org/publication/PubMed/23660473" } ] }, { "title": "Quantitative phosphoproteomics identifies SnRK2 protein kinase substrates and reveals the effectors of abscisic acid action.", "journal": "Proceedings of the National Academy of Sciences of the United States of America", "date": "2013-07-02", "authors": "Wang Pengcheng, Xue Liang, Batelli Giorgia, Lee Shinyoung, Hou Yueh-Ju, Van Oosten Michael J, Zhang Huiming, Tao W Andy, Zhu Jian-Kang", "evidence": [ { "database": "iPTMnet", "id": "Q9SLM4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SLM4" } ], "reference": [ { "type": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" } ] }, { "title": "Quantitative phosphoproteomics of the ataxia telangiectasia-mutated (ATM) and ataxia telangiectasia-mutated and rad3-related (ATR) dependent DNA damage response in Arabidopsis thaliana.", "journal": "Molecular & cellular proteomics : MCP", "date": "2015-03", "authors": "Roitinger Elisabeth, Hofer Manuel, K\u00f6cher Thomas, Pichler Peter, Novatchkova Maria, Yang Jianhua, Schl\u00f6gelhofer Peter, Mechtler Karl", "evidence": [ { "database": "iPTMnet", "id": "Q9SLM4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SLM4" } ], "reference": [ { "type": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] }, { "title": "Quantitative Circadian Phosphoproteomic Analysis of Arabidopsis Reveals Extensive Clock Control of Key Components in Physiological, Metabolic, and Signaling Pathways.", "journal": "Molecular & cellular proteomics : MCP", "date": "2015-08", "authors": "Choudhary Mani Kant, Nomura Yuko, Wang Lei, Nakagami Hirofumi, Somers David E", "evidence": [ { "database": "iPTMnet", "id": "Q9SLM4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SLM4" } ], "reference": [ { "type": "PubMed", "id": "26091701", "url": 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"categories": [ "Other" ] }, { "id": "ath:AT3G48550", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G48550", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "RRIDPTC", "url": "https://omabrowser.org/oma/group/RRIDPTC/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A1I9LLT9", "url": "https://www.orthodb.org/?gene=A0A1I9LLT9", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "Q9SMP3", "url": "https://www.orthodb.org/?gene=Q9SMP3", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR34946", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR34946", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR34946:SF2", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR34946:SF2", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "NP_190424", "url": 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"length": 158, "header": "tr|Q9SMP3-1|Q9SMP3_ARATH Isoform 1 of SHOOT GRAVITROPISM-like protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9SMP3-1" }, "isoforms": [ { "isoform_ac": "A0A1I9LLT9-1", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LLT9/entry", "sequence": { "sequence": "MAEQQDHHKELQLLPSPPSTESPVRKHRPTVITTDHHNNHHRSSSMIHHDLDLKLSISLSSISTAEELPNGGVEALKWQAAEQIRLAAIEKAYAERVRELTRREMEMAQSEFARARQGKKWRELRD", "length": 126, "header": "tr|A0A1I9LLT9-1|A0A1I9LLT9_ARATH Computationally mapped isoform of SHOOT GRAVITROPISM-like protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9SMP3-1" }, "locus": { "chromosome": "3", "start_pos": 17993999, "end_pos": 17994743, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G48550.2", "url": "https://www.ensemblgenomes.org/id/AT3G48550.2" }, { "database": "Ensembl Peptide", "id": "AT3G48550.2", "url": "https://www.ensemblgenomes.org/id/AT3G48550.2" } ] } }, { "isoform_ac": "Q9SMP3-1", "url": 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Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9SMP3", "url": "https://www.uniprot.org/uniprotkb/Q9SMP3" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, 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"NP_566907", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_566907", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G48510", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G48510", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9SMP6", "url": "https://www.uniprot.org/uniprotkb/Q9SMP6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9SMP6-1", "url": "https://www.uniprot.org/uniprotkb/Q9SMP6-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MDGRGGCCIARYAIGSGPYDLSKADRIMLRFRPIAPKPASPGGVNPVSSGDSGGGSSDVSFRSASRRKRKCHQLKENGGNAKRCTRRKTSDKPVVHGSANAVTLSLLPEKPIDLKAAVEKQKRQGPLWLSFKDGGGMLTPAYQTPEIVQRTVVISSCMTVERVTDAWIDGYGLGRSDEERKMNLVRDTCPGFISDGSGRVTWTNDAYRKMARDIIPVEEGAPEITSGDSFHVIVRLVMRERPMLTSPGFTCRMKLQYTCQNRERGSVTVPCDVWRMDVGGGFAWRLDVKAALCL", "length": 294, "header": "tr|Q9SMP6-1|Q9SMP6_ARATH Isoform 1 of AtIII18x5-like protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SMP6-1" }, "isoforms": [ { "isoform_ac": "Q9SMP6-1", "url": "https://www.uniprot.org/uniprotkb/Q9SMP6/entry", "sequence": { "sequence": "MDGRGGCCIARYAIGSGPYDLSKADRIMLRFRPIAPKPASPGGVNPVSSGDSGGGSSDVSFRSASRRKRKCHQLKENGGNAKRCTRRKTSDKPVVHGSANAVTLSLLPEKPIDLKAAVEKQKRQGPLWLSFKDGGGMLTPAYQTPEIVQRTVVISSCMTVERVTDAWIDGYGLGRSDEERKMNLVRDTCPGFISDGSGRVTWTNDAYRKMARDIIPVEEGAPEITSGDSFHVIVRLVMRERPMLTSPGFTCRMKLQYTCQNRERGSVTVPCDVWRMDVGGGFAWRLDVKAALCL", "length": 294, "header": "tr|Q9SMP6-1|Q9SMP6_ARATH Isoform 1 of AtIII18x5-like protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SMP6-1" }, "locus": { "chromosome": "3", "start_pos": 17967354, "end_pos": 17968590, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G48510.1", "url": "https://www.ensemblgenomes.org/id/AT3G48510.1" }, { "database": "Ensembl Peptide", "id": "AT3G48510.1", "url": "https://www.ensemblgenomes.org/id/AT3G48510.1" } ] } } ], "glycosylation": [], "phosphorylation": [ { "start_pos": 164, "end_pos": 164, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Thr", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SMP6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SMP6" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" } ], "site_lbl": "Thr164" }, { "start_pos": 268, "end_pos": 268, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Thr", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SMP6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SMP6" }, { "database": "PubMed", "id": "28011693", "url": "https://glygen.org/publication/PubMed/28011693" } ], "site_lbl": "Thr268" } ], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9SMP6", "url": "https://www.uniprot.org/uniprotkb/Q9SMP6" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Large-scale comparative phosphoproteomics identifies conserved phosphorylation sites in plants.", "journal": "Plant physiology", "date": "2010-07", "authors": "Nakagami Hirofumi, Sugiyama Naoyuki, Mochida Keiichi, Daudi Arsalan, Yoshida Yuko, Toyoda Tetsuro, Tomita Masaru, Ishihama Yasushi, Shirasu Ken", "evidence": [ { "database": "iPTMnet", "id": "Q9SMP6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SMP6" } ], "reference": [ { "type": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9SMP6", "url": "https://www.uniprot.org/uniprotkb/Q9SMP6" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] }, { "title": "Protein Phosphatase 2Cs and Microtubule-Associated Stress Protein 1 Control Microtubule Stability, Plant Growth, and Drought Response.", "journal": "The Plant cell", "date": "2017-01", "authors": "Bhaskara Govinal Badiger, Wen Tuan-Nan, Nguyen Thao Thi, Verslues Paul E", "evidence": [ { "database": "iPTMnet", "id": "Q9SMP6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SMP6" } ], "reference": [ { "type": "PubMed", "id": "28011693", "url": "https://glygen.org/publication/PubMed/28011693" } ] } ], "pathway": [ { "id": "ath:AT3G48510", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G48510", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q9SMP6", "url": "https://www.uniprot.org/uniprotkb/Q9SMP6" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 4, "go_terms": [ { "name": "negative regulation of DNA-templated transcription initiation", "id": "GO:2000143", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:2000143", "evidence": [ { "database": "UniProtKB", "id": "Q9SMP6", "url": "https://www.uniprot.org/uniprotkb/Q9SMP6" } ], "pmid": "" }, { "name": "seed dormancy process", "id": "GO:0010162", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010162", "evidence": [ { "database": "UniProtKB", "id": "Q9SMP6", "url": "https://www.uniprot.org/uniprotkb/Q9SMP6" } ], "pmid": "" }, { "name": "seed maturation", "id": "GO:0010431", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010431", "evidence": [ { "database": "UniProtKB", "id": "Q9SMP6", "url": "https://www.uniprot.org/uniprotkb/Q9SMP6" } ], "pmid": "" }, { "name": "release of seed from dormancy", "id": "GO:0048838", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0048838", "evidence": [ { "database": "UniProtKB", "id": "Q9SMP6", "url": "https://www.uniprot.org/uniprotkb/Q9SMP6" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], 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"date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "Q9SMQ3-1", "uniprot_ac": "Q9SMQ3", "uniprot_id": "Q9SMQ3_ARATH", "mass": { "chemical_mass": 70024.0, "monoisotopic_mass": 70024.0 }, "refseq": {}, "gene_names": [ { "name": "T5J17.190", "type": "synonym", "evidence": [ { "id": "Q9SMQ3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SMQ3" } ] }, { "name": "T5J17_190", "type": "synonym", "evidence": [ { "id": "Q9SMQ3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SMQ3" } ] } ], "protein_names": [ { "name": "Myosin heavy chain-related protein", "type": "synonym", "evidence": [ { "id": "Q9SMQ3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SMQ3/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9SMQ3", "url": "https://www.uniprot.org/uniprotkb/Q9SMQ3" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9SMQ3", "locus": {} } ], "crossref": [ { "id": "AT4G40020", "url": "https://bar.utoronto.ca/thalemine/portal.do?externalids=AT4G40020", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "830163", "url": "https://www.ncbi.nlm.nih.gov/gene/830163", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "ath:AT4G40020", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT4G40020", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "NHKVRDI", "url": "https://omabrowser.org/oma/group/NHKVRDI/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR35164", "url": 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"MGEVDEKPSIDVASPRYSSNKVADIGTELYKMKASLENRENEVVSLKQELLKKDIFIKNLEAAEKKLLDSFKDQSRELEETKALVEESKVEIASLKEKIDTSYNSQDSSEEDEDDSSVQDFDIESLKTEMESTKESLAQAHEAAQASSLKVSELLEEMKSVKNELKSATDAEMTNEKAMDDLALALKEVATDCSQTKEKLVIVETELEAARIESQQWKDKYEEVRKDAELLKNTSERLRIEAEESLLAWNGKESVFVTCIKRGEDEKNSLLDENNRLLEALVAAENLSKKAKEENHKVRDILKQAINEANVAKEAAGIARAENSNLKDALLDKEEELQFALKEIERVKVNEAVANDNIKKLKKMLSEIEVAMEEEKQRSLNRQESMPKEVVEVVEKKIEEKEKKEEKKENKKEKKESKKEKKEHSEKKEDKEKKEQTHQNFDKRMIGKTCSFSIMKLAHHNHNHKHNKETSEEETKNANGGNHQENSDESGEGNSPSSDSYLFKGSIFDIAETPHAQMHHKRRSSCTFLEEVETINPEDLENLDGNHLEEGELNDKGAVARKKKAFIRRFGDLLVRRKSLSFSHKKESSTDSQDKQQPQTPTSPSPPLPPMSPEP", "length": 615, "header": "tr|Q9SMQ3-1|Q9SMQ3_ARATH Isoform 1 of Myosin heavy chain-related protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SMQ3-1" }, "isoforms": [ { "isoform_ac": "Q9SMQ3-1", "url": "https://www.uniprot.org/uniprotkb/Q9SMQ3/entry", "sequence": { "sequence": "MGEVDEKPSIDVASPRYSSNKVADIGTELYKMKASLENRENEVVSLKQELLKKDIFIKNLEAAEKKLLDSFKDQSRELEETKALVEESKVEIASLKEKIDTSYNSQDSSEEDEDDSSVQDFDIESLKTEMESTKESLAQAHEAAQASSLKVSELLEEMKSVKNELKSATDAEMTNEKAMDDLALALKEVATDCSQTKEKLVIVETELEAARIESQQWKDKYEEVRKDAELLKNTSERLRIEAEESLLAWNGKESVFVTCIKRGEDEKNSLLDENNRLLEALVAAENLSKKAKEENHKVRDILKQAINEANVAKEAAGIARAENSNLKDALLDKEEELQFALKEIERVKVNEAVANDNIKKLKKMLSEIEVAMEEEKQRSLNRQESMPKEVVEVVEKKIEEKEKKEEKKENKKEKKESKKEKKEHSEKKEDKEKKEQTHQNFDKRMIGKTCSFSIMKLAHHNHNHKHNKETSEEETKNANGGNHQENSDESGEGNSPSSDSYLFKGSIFDIAETPHAQMHHKRRSSCTFLEEVETINPEDLENLDGNHLEEGELNDKGAVARKKKAFIRRFGDLLVRRKSLSFSHKKESSTDSQDKQQPQTPTSPSPPLPPMSPEP", "length": 615, "header": "tr|Q9SMQ3-1|Q9SMQ3_ARATH Isoform 1 of Myosin heavy chain-related protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SMQ3-1" }, "locus": { "chromosome": "4", "start_pos": 18553168, "end_pos": 18555355, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT4G40020.1", "url": 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D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, 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"https://www.ebi.ac.uk/interpro/entry/pfam/PF24758", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PR:Q9SMT9", "url": "https://proconsortium.org/cgi-bin/entry_pro?id=PR:Q9SMT9", "database": "PRO", "categories": [ "Protein" ] }, { "id": "NP_190471", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_190471", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G49020", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G49020", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9SMT9", "url": "https://www.uniprot.org/uniprotkb/Q9SMT9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9SMT9-1", "url": "https://www.uniprot.org/uniprotkb/Q9SMT9-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MEQKCKIGGEGLRNRGLVNEEDRISELPEALLLLILSSLPTETVIATSVLSKQWKSLWKLVPNLKFDSKYHYHYTFSDNVFRSLISHKAPVLDSLHLKVEDKDDALDVGILIGIAFSRHMRKFVLKITLLEESFVRFPSAWCSCNDTLEILELKYCILLDFPSLVCLKSLRKLYLYHVRFNDEESVCNLLCGCPSLEDLVVHRHSTTDVESYTIAVPSLQRLTIYDDYYGEGVGGYVINAPSLKYLNIDGFNGLEFCLIEKAPELVEAKISAVFEIANENIMDSLTSAKCLSLHLAPFKIKYPTGKIFYQLLSLELRAYSYEWWNLLWFMLDSSPKLQILKLVDPYQFPKEDCSVGWEWSRPKCVPECLLFHLETFVWTRYEWQREDEKAVATYILKNARCLKKATLSTKPIGSEELEKLGKRREMLNELATQASPSNSCNLVFESE", "length": 447, "header": "sp|Q9SMT9-1|FBD9_ARATH Isoform 1 of FBD-associated F-box protein At3g49020 OS=Arabidopsis thaliana OX=3702 GN= PE=2 SV=1 CANONICAL=Q9SMT9-1" }, "isoforms": [ { "isoform_ac": "Q9SMT9-1", "url": "https://www.uniprot.org/uniprotkb/Q9SMT9/entry#Q9SMT9-1", "sequence": { "sequence": "MEQKCKIGGEGLRNRGLVNEEDRISELPEALLLLILSSLPTETVIATSVLSKQWKSLWKLVPNLKFDSKYHYHYTFSDNVFRSLISHKAPVLDSLHLKVEDKDDALDVGILIGIAFSRHMRKFVLKITLLEESFVRFPSAWCSCNDTLEILELKYCILLDFPSLVCLKSLRKLYLYHVRFNDEESVCNLLCGCPSLEDLVVHRHSTTDVESYTIAVPSLQRLTIYDDYYGEGVGGYVINAPSLKYLNIDGFNGLEFCLIEKAPELVEAKISAVFEIANENIMDSLTSAKCLSLHLAPFKIKYPTGKIFYQLLSLELRAYSYEWWNLLWFMLDSSPKLQILKLVDPYQFPKEDCSVGWEWSRPKCVPECLLFHLETFVWTRYEWQREDEKAVATYILKNARCLKKATLSTKPIGSEELEKLGKRREMLNELATQASPSNSCNLVFESE", "length": 447, "header": "sp|Q9SMT9-1|FBD9_ARATH Isoform 1 of FBD-associated F-box protein At3g49020 OS=Arabidopsis thaliana OX=3702 GN= PE=2 SV=1 CANONICAL=Q9SMT9-1" }, "locus": { "chromosome": "3", "start_pos": 18169079, "end_pos": 18170660, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G49020.1", "url": "https://www.ensemblgenomes.org/id/AT3G49020.1" }, { "database": "Ensembl Peptide", "id": "AT3G49020.1", "url": "https://www.ensemblgenomes.org/id/AT3G49020.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9SMT9", "url": "https://www.uniprot.org/uniprotkb/Q9SMT9" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9SMT9", "url": "https://www.uniprot.org/uniprotkb/Q9SMT9" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G49020", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G49020", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q9SMT9", "url": "https://www.uniprot.org/uniprotkb/Q9SMT9" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 145, "end_pos": 147, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-Q9SMT9-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 447, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-Q9SMT9-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/Q9SMT9" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "Q9SMT9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SMT9" }, { "id": "PRU00080", "database": "PROSITE", "url": "https://prosite.expasy.org/PRU00080" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "F-box", "eco_id": "ECO_0000255", "start_pos": 21, "end_pos": 84, "start_aa": "Glu", "end_aa": "Leu", "glycosite_overlap": [] } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 145, "end_pos": 147 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "Q9SMU0-1", "uniprot_ac": "Q9SMU0", "uniprot_id": "FDL18_ARATH", "mass": { "chemical_mass": 50820.0, "monoisotopic_mass": 50820.0 }, "refseq": { "ac": "NP_190472", "name": "FBD, F-box and Leucine Rich Repeat domains containing protein", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_190472" }, "gene_names": [ { "name": "T2J13.130", "type": "synonym", "evidence": [ { "id": "Q9SMU0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SMU0" } ] } ], "protein_names": [ { "name": "Putative F-box/FBD/LRR-repeat protein At3g49030", "type": "recommended", "evidence": [ { "id": "Q9SMU0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SMU0/entry#names_and_taxonomy" } ] }, { "name": "FBD, F-box and Leucine Rich Repeat domains containing protein", "type": "synonym", "evidence": [ { "id": "NP_190472", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_190472" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9SMU0", "url": "https://www.uniprot.org/uniprotkb/Q9SMU0" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9SMU0", "locus": {} } ], "crossref": [ { "id": "Q9SMU0", "url": "https://alphafold.ebi.ac.uk/entry/Q9SMU0", "database": "AlphaFoldDB", "categories": [] }, { "id": "AT3G49030", "url": "https://bar.utoronto.ca/thalemine/portal.do?externalids=AT3G49030", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "cd22160", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd22160", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "824064", "url": "https://www.ncbi.nlm.nih.gov/gene/824064", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR001810", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001810", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR006566", "url": "https://www.ebi.ac.uk/interpro/entry/IPR006566", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR032675", "url": "https://www.ebi.ac.uk/interpro/entry/IPR032675", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036047", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036047", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR050232", "url": "https://www.ebi.ac.uk/interpro/entry/IPR050232", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR053781", "url": "https://www.ebi.ac.uk/interpro/entry/IPR053781", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR055411", "url": "https://www.ebi.ac.uk/interpro/entry/IPR055411", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT3G49030", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G49030", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "YRIEINT", "url": "https://omabrowser.org/oma/group/YRIEINT/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR31900", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31900", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR31900:SF34", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31900:SF34", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00646", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00646", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF08387", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF08387", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF24758", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF24758", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PR:Q9SMU0", "url": "https://proconsortium.org/cgi-bin/entry_pro?id=PR:Q9SMU0", "database": "PRO", "categories": [ "Protein" ] }, { "id": "NP_190472", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_190472", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G49030", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G49030", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "F4IWQ4", "url": "https://www.uniprot.org/uniprotkb/F4IWQ4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F4IWQ4-1", "url": "https://www.uniprot.org/uniprotkb/F4IWQ4-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9SMU0", "url": "https://www.uniprot.org/uniprotkb/Q9SMU0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9SMU0-1", "url": "https://www.uniprot.org/uniprotkb/Q9SMU0-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MEQQLKTDGLNLSIRDAVKEDRISELPEDLLLQILSDIPTENVIATSVLSKRWRSLWKMVPNLTFDFTFDPKYHQTFSENLYRSLTSHEASVLESLQLNFTRGIDGLNIGMWIATAYVRHVRKLVLVSFGDVRDKRARFRSALFNFNDTLDILEIQDYILLDLPSPVCLKSLRELRLYEVHFKDEASVCNLLCGCPSLEVLSVHRERNVDVETFTIVVPSLQRLTIYDFCIGGGKGGYVINAPSLKYLNIVGFEGLDFCLIENAPELVEAEISDVSHIANENILESLTSVKRLSLESPIKIKFPTGKVFDQLVYLDVLTKEREWWNLLSRMLESSPKLQILKLTGLSCIEKGLDGQNWNPPKCVPECLLFHLEKFLWTGYEWQRGDEKEVATYILENARLLKKATFSTKRIDLENLEKRREMLNELASVARASDSCHLVFHSI", "length": 443, "header": "sp|Q9SMU0-1|FDL18_ARATH Isoform 1 of Putative F-box/FBD/LRR-repeat protein At3g49030 OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9SMU0-1" }, "isoforms": [ { "isoform_ac": "F4IWQ4-1", "url": "https://www.uniprot.org/uniprotkb/F4IWQ4/entry", "sequence": { "sequence": "MEQQLKTDGLNLSIRDAVKEDRISELPEDLLLQILSDIPTENVIATSVLSKRWRSLWKMVPNLTFDFTFDPKYHQTFSENLYRSLTSHEASVLESLQLNFTRGIDGLNIGMWIATAYVRHVRKLVLVSFGDVRDKRARFRSALFNFNDTLDILEIQDYILLDLPSPVCLKSLRELRLYEVHFKDEASVCNLLCGCPSLEVLSVHRERNVDVETFTIVVPSLQRLTIYDFCIGGGKGGYVINAPSLKYLNIVGFEGLDFCLIENAPELVEAEISDVSHIANENILESLTSVKRLSLESPIKNSTLRYFFYFVLHKLPCSQLSCIEKGLDGQNWNPPKCVPECLLFHLEKFLWTGYEWQRGDEKEVATYILENARLLKKATFSTKRIDLENLEKRREMLNELASVARASDSCHLVFHSI", "length": 417, "header": "tr|F4IWQ4-1|F4IWQ4_ARATH Computationally mapped isoform of FBD, F-box and Leucine Rich Repeat domains containing protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SMU0-1" }, "locus": { "chromosome": "3", "start_pos": 18173087, "end_pos": 18174947, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G49030.2", "url": "https://www.ensemblgenomes.org/id/AT3G49030.2" }, { "database": "Ensembl Peptide", "id": "AT3G49030.2", "url": "https://www.ensemblgenomes.org/id/AT3G49030.2" } ] } }, { "isoform_ac": "Q9SMU0-1", "url": "https://www.uniprot.org/uniprotkb/Q9SMU0/entry#Q9SMU0-1", "sequence": { "sequence": "MEQQLKTDGLNLSIRDAVKEDRISELPEDLLLQILSDIPTENVIATSVLSKRWRSLWKMVPNLTFDFTFDPKYHQTFSENLYRSLTSHEASVLESLQLNFTRGIDGLNIGMWIATAYVRHVRKLVLVSFGDVRDKRARFRSALFNFNDTLDILEIQDYILLDLPSPVCLKSLRELRLYEVHFKDEASVCNLLCGCPSLEVLSVHRERNVDVETFTIVVPSLQRLTIYDFCIGGGKGGYVINAPSLKYLNIVGFEGLDFCLIENAPELVEAEISDVSHIANENILESLTSVKRLSLESPIKIKFPTGKVFDQLVYLDVLTKEREWWNLLSRMLESSPKLQILKLTGLSCIEKGLDGQNWNPPKCVPECLLFHLEKFLWTGYEWQRGDEKEVATYILENARLLKKATFSTKRIDLENLEKRREMLNELASVARASDSCHLVFHSI", "length": 443, "header": "sp|Q9SMU0-1|FDL18_ARATH Isoform 1 of Putative F-box/FBD/LRR-repeat protein At3g49030 OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9SMU0-1" }, "locus": { "chromosome": "3", "start_pos": 18173138, "end_pos": 18174769, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G49030.1", "url": "https://www.ensemblgenomes.org/id/AT3G49030.1" }, { "database": "Ensembl Peptide", "id": "AT3G49030.1", "url": "https://www.ensemblgenomes.org/id/AT3G49030.1" } ] } } ], "glycosylation": [], "phosphorylation": [ { "start_pos": 13, "end_pos": 13, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SMU0", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SMU0" } ], "site_lbl": "Ser13" }, { "start_pos": 393, "end_pos": 393, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Tyr", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SMU0", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SMU0" }, { "database": "PubMed", "id": "22060019", "url": "https://glygen.org/publication/PubMed/22060019" } ], "site_lbl": "Tyr393" }, { "start_pos": 7, "end_pos": 7, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Thr", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SMU0", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SMU0" } ], "site_lbl": "Thr7" } ], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9SMU0", "url": "https://www.uniprot.org/uniprotkb/Q9SMU0" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Nitrate and ammonium lead to distinct global dynamic phosphorylation patterns when resupplied to nitrogen-starved Arabidopsis seedlings.", "journal": "The Plant journal : for cell and molecular biology", "date": "2012-03", "authors": "Engelsberger Wolfgang R, Schulze Waltraud X", "evidence": [ { "database": "iPTMnet", "id": "Q9SMU0", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SMU0" } ], "reference": [ { "type": "PubMed", "id": "22060019", "url": "https://glygen.org/publication/PubMed/22060019" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9SMU0", "url": "https://www.uniprot.org/uniprotkb/Q9SMU0" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G49030", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G49030", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q9SMU0", "url": "https://www.uniprot.org/uniprotkb/Q9SMU0" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 11, "end_pos": 13, "annotation": "n_glycosylation_sequon" }, { "start_pos": 147, "end_pos": 149, "annotation": "n_glycosylation_sequon" }, { "start_pos": 62, "end_pos": 64, "annotation": "n_glycosylation_sequon" }, { "start_pos": 99, "end_pos": 101, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": 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"type": "synonym", "evidence": [ { "id": "Q9SMU2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SMU2/entry#names_and_taxonomy" } ] }, { "name": "alpha/beta-Hydrolases superfamily protein", "type": "synonym", "evidence": [ { "id": "NP_190474", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_190474" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9SMU2", "url": "https://www.uniprot.org/uniprotkb/Q9SMU2" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9SMU2", "locus": {} } ], "crossref": [ { "id": "AT3G49050", "url": "https://bar.utoronto.ca/thalemine/portal.do?externalids=AT3G49050", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "cd00519", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd00519", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "824066", "url": "https://www.ncbi.nlm.nih.gov/gene/824066", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR002921", "url": "https://www.ebi.ac.uk/interpro/entry/IPR002921", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR005592", "url": "https://www.ebi.ac.uk/interpro/entry/IPR005592", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR029058", "url": "https://www.ebi.ac.uk/interpro/entry/IPR029058", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT3G49050", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G49050", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "IRNPVWE", "url": "https://omabrowser.org/oma/group/IRNPVWE/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR46398", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR46398", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR46398:SF4", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR46398:SF4", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF01764", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF01764", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF03893", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF03893", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_190474", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_190474", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G49050", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G49050", 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CANONICAL=Q9SMU2-1" }, "isoforms": [ { "isoform_ac": "Q9SMU2-1", "url": "https://www.uniprot.org/uniprotkb/Q9SMU2/entry", "sequence": { "sequence": "MSILCGCCPLLECVYCLGCARWGYKRCLYTAGHDSEDWGLATTDEFEPVPRFCRYILAVYEDDIRNPLWEPPEGYGINPDWLLLKKTYEDTQGRAPAYILYLDHVHQDIVVAIRGLNLAKESDYAMLLDNKLGERKFDGGYVHNGLVKSAGYVLDEECKVLKELVKKYPSYTLTFAGHSLGSGVATMLALLVVRHPERLGNIDRKRVRCFAIAPARCMSLNLAVRYADVINSVILQDDFLPRTATPLEDIFKSVFCLPCLLCIRCMKDTCVPEQKMLKDPRRLYAPGRMYHIVERKPCRLGRYPPVVKTAVPVDGRFEHIVLSCNATSDHAIIWIEREAQRALNLMMENEKKMEIPEKQRMERQESLAREHNLEYRAALRRAVTLDVPHAESMAYEYGTFDKTQEDETEEEEVETEEEEEDTDSIAPMVGESSSSSSVKPTYRIRRNRRVSWDELIEHLFERDESGNLTFEKSDLPQ", "length": 477, "header": "tr|Q9SMU2-1|Q9SMU2_ARATH Isoform 1 of Alpha/beta-Hydrolases superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SMU2-1" }, "locus": { "chromosome": "3", "start_pos": 18180907, "end_pos": 18184048, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G49050.1", "url": 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Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9SMU2", "url": "https://www.uniprot.org/uniprotkb/Q9SMU2" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Quantitative phosphoproteomics of the ataxia telangiectasia-mutated (ATM) and ataxia telangiectasia-mutated and rad3-related (ATR) dependent DNA damage response in Arabidopsis thaliana.", "journal": "Molecular & cellular proteomics : MCP", "date": "2015-03", "authors": "Roitinger Elisabeth, Hofer Manuel, K\u00f6cher Thomas, Pichler Peter, Novatchkova Maria, Yang Jianhua, Schl\u00f6gelhofer Peter, 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"https://www.uniprot.org/uniprotkb/Q9SMW3#ptm_processing" }, { "id": "PRU00498", "database": "PROSITE-ProRule", "url": "https://prosite.expasy.org/rule/PRU00498" } ], "filter_code": "001000000000000000000.00010000000000.0.01000" }, { "glytoucan_ac": "", "type": "N-linked", "subtype": "other", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 348, "start_aa": "Asn", "end_pos": 348, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn348", "evidence": [ { "id": "Q9SMW3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SMW3#ptm_processing" }, { "id": "PRU00498", "database": "PROSITE-ProRule", "url": "https://prosite.expasy.org/rule/PRU00498" } ], "filter_code": "001000000000000000000.00010000000000.0.01000" }, { "glytoucan_ac": "", "type": "N-linked", "subtype": "other", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 419, "start_aa": "Asn", "end_pos": 419, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn419", "evidence": [ { "id": "Q9SMW3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SMW3#ptm_processing" }, { "id": "PRU00498", "database": "PROSITE-ProRule", "url": "https://prosite.expasy.org/rule/PRU00498" } ], "filter_code": "001000000000000000000.00010000000000.0.01000" }, { "glytoucan_ac": "", "type": "N-linked", "subtype": "other", "prediction_tool_list": [], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 59, "start_aa": "Asn", "end_pos": 59, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn59", "evidence": [ { "id": "Q9SMW3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SMW3#ptm_processing" }, { "id": "PRU00498", "database": "PROSITE-ProRule", "url": "https://prosite.expasy.org/rule/PRU00498" } ], "filter_code": "001000000000000000000.00010000000000.0.01000" } ], "phosphorylation": [], "glycation": [], "keywords": [ "enzyme", "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Theologis A, Ecker J R, Palm C J, Federspiel N A, Kaul S, White O, Alonso J, Altafi H, Araujo R, Bowman C L, Brooks S Y, Buehler E, Chan A, Chao Q, Chen H, Cheuk R F, Chin C W, Chung M K, Conn L, Conway A B, Conway A R, Creasy T H, Dewar K, Dunn P, Etgu P, Feldblyum T V, Feng J, Fong B, Fujii C Y, Gill J E, Goldsmith A D, Haas B, Hansen N F, Hughes B, Huizar L, Hunter J L, Jenkins J, Johnson-Hopson C, Khan S, Khaykin E, Kim C J, Koo H L, Kremenetskaia I, Kurtz D B, Kwan A, Lam B, Langin-Hooper S, Lee A, Lee J M, Lenz C A, Li J H, Li Y, Lin X, Liu S X, Liu Z A, Luros J S, Maiti R, Marziali A, Militscher J, Miranda M, Nguyen M, Nierman W C, Osborne B I, Pai G, Peterson J, Pham P K, Rizzo M, Rooney T, Rowley D, Sakano H, Salzberg S L, Schwartz J R, Shinn P, Southwick A M, Sun H, Tallon L J, Tambunga G, Toriumi M J, Town C D, Utterback T, Van Aken S, Vaysberg M, Vysotskaia V S, Walker M, Wu D, Yu G, Fraser C M, Venter J C, Davis R W", "evidence": [ { "database": "UniProtKB", "id": "Q9SMW3", "url": "https://www.uniprot.org/uniprotkb/Q9SMW3" } ], "reference": [ { "type": "PubMed", "id": "11130712", "url": "https://glygen.org/publication/PubMed/11130712" } ] }, { "title": "Functional annotation of a full-length Arabidopsis cDNA collection.", "journal": "Science", "date": "2002", "authors": "Seki Motoaki, Narusaka Mari, Kamiya Asako, Ishida Junko, Satou Masakazu, Sakurai Tetsuya, Nakajima Maiko, Enju Akiko, Akiyama Kenji, Oono Youko, Muramatsu Masami, Hayashizaki Yoshihide, Kawai Jun, Carninci Piero, Itoh Masayoshi, Ishii Yoshiyuki, Arakawa Takahiro, Shibata Kazuhiro, Shinagawa Akira, Shinozaki Kazuo", "evidence": [ { "database": "UniProtKB", "id": "Q9SMW3", "url": "https://www.uniprot.org/uniprotkb/Q9SMW3" } ], "reference": [ { "type": "PubMed", "id": "11910074", "url": "https://glygen.org/publication/PubMed/11910074" } ] }, { "title": "Empirical analysis of transcriptional activity in the Arabidopsis genome.", "journal": "Science", "date": "2003", "authors": "Yamada Kayoko, Lim Jun, Dale Joseph M, Chen Huaming, Shinn Paul, Palm Curtis J, Southwick Audrey M, Wu Hank C, Kim Christopher, Nguyen Michelle, Pham Paul, Cheuk Rosa, Karlin-Newmann George, Liu Shirley X, Lam Bao, Sakano Hitomi, Wu Troy, Yu Guixia, Miranda Molly, Quach Hong L, Tripp Matthew, Chang Charlie H, Lee Jeong M, Toriumi Mitsue, Chan Marie M H, Tang Carolyn C, Onodera Courtney S, Deng Justine M, Akiyama Kenji, Ansari Yasser, Arakawa Takahiro, Banh Jenny, Banno Fumika, Bowser Leah, Brooks Shelise, Carninci Piero, Chao Qimin, Choy Nathan, Enju Akiko, Goldsmith Andrew D, Gurjal Mani, Hansen Nancy F, Hayashizaki Yoshihide, Johnson-Hopson Chanda, Hsuan Vickie W, Iida Kei, Karnes Meagan, Khan Shehnaz, Koesema Eric, Ishida Junko, Jiang Paul X, Jones Ted, Kawai Jun, Kamiya Asako, Meyers Cristina, Nakajima Maiko, Narusaka Mari, Seki Motoaki, Sakurai Tetsuya, Satou Masakazu, Tamse Racquel, Vaysberg Maria, Wallender Erika K, Wong Cecilia, Yamamura Yuki, Yuan Shiaulou, Shinozaki Kazuo, Davis Ronald W, Theologis Athanasios, Ecker Joseph R", "evidence": [ { "database": "UniProtKB", "id": "Q9SMW3", "url": "https://www.uniprot.org/uniprotkb/Q9SMW3" } ], "reference": [ { "type": "PubMed", "id": "14593172", "url": "https://glygen.org/publication/PubMed/14593172" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes 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Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9SN03", "url": "https://www.uniprot.org/uniprotkb/Q9SN03" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Nitrate and ammonium lead to distinct global dynamic phosphorylation patterns when resupplied to nitrogen-starved Arabidopsis seedlings.", "journal": "The Plant journal : for cell and molecular biology", "date": "2012-03", "authors": "Engelsberger Wolfgang R, Schulze Waltraud X", "evidence": [ { "database": "iPTMnet", "id": "Q9SN03", "url": 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"GeneID", "categories": [ "Genome Annotation" ] }, { "id": "Q9SN06", "url": "https://www.ebi.ac.uk/intact/interactors/id:Q9SN06*", "database": "IntAct", "categories": [ "Other" ] }, { "id": "IPR004158", "url": "https://www.ebi.ac.uk/interpro/entry/IPR004158", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT3G50120", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G50120", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "WDIKFKD", "url": "https://omabrowser.org/oma/group/WDIKFKD/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR31170", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31170", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR31170:SF25", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31170:SF25", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF03140", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF03140", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_190581", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_190581", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G50120", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G50120", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9SN06", "url": "https://www.uniprot.org/uniprotkb/Q9SN06", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9SN06-1", "url": "https://www.uniprot.org/uniprotkb/Q9SN06-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MVAVFYKDMLSWYLLTLKIREKLETQNQESVLVNQDQNLPGLPEITRSDQDQNIHNNQQTQSDPAIYVIKESPKDSRDDWVISITDKLEQAHRDDDTTLWGKLCIYRVPYYLQENDNKSYFPQTVSLGPYHHGKKRLRSMDRHKWRAVNRVLKRTNQGIKMYIDAMRELEEKARACYEGPLSLSSNEFIEMLVLDGCFVLELFRGAVEGFTELGYARNDPVFAMRGSMHSIQRDMVMLENQLPLFVLNRLLELQLGTRNQTGLVAQLAIRFFDPLMPTDEPLTKSGQSKLENSLARDKSFDPFADMGELHCLDVFRRSLLRSSPKPEPRLTRKRWSRNTRVADKRRQQLIHCVTELKEAGIKFRRRKTDRFWDMQFKNGYLEIPRLLIHDGTKSLFLNLIAFEQCHIDSSNDITSYIIFMDNLIDSHEDVSYLHYCGIIEHWLGSDSEVADLFNRLCQEVVFDTEDSYLSRLSIEVNRYYDHKWNAWRATLKHKYFNNPWAIVSFCAAVILLVLTFSQSFYAVYAYYKPPS", "length": 531, "header": "tr|Q9SN06-1|Q9SN06_ARATH Isoform 1 of Transmembrane protein, putative (DUF247) OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SN06-1" }, "isoforms": [ { "isoform_ac": "Q9SN06-1", "url": "https://www.uniprot.org/uniprotkb/Q9SN06/entry", "sequence": { "sequence": "MVAVFYKDMLSWYLLTLKIREKLETQNQESVLVNQDQNLPGLPEITRSDQDQNIHNNQQTQSDPAIYVIKESPKDSRDDWVISITDKLEQAHRDDDTTLWGKLCIYRVPYYLQENDNKSYFPQTVSLGPYHHGKKRLRSMDRHKWRAVNRVLKRTNQGIKMYIDAMRELEEKARACYEGPLSLSSNEFIEMLVLDGCFVLELFRGAVEGFTELGYARNDPVFAMRGSMHSIQRDMVMLENQLPLFVLNRLLELQLGTRNQTGLVAQLAIRFFDPLMPTDEPLTKSGQSKLENSLARDKSFDPFADMGELHCLDVFRRSLLRSSPKPEPRLTRKRWSRNTRVADKRRQQLIHCVTELKEAGIKFRRRKTDRFWDMQFKNGYLEIPRLLIHDGTKSLFLNLIAFEQCHIDSSNDITSYIIFMDNLIDSHEDVSYLHYCGIIEHWLGSDSEVADLFNRLCQEVVFDTEDSYLSRLSIEVNRYYDHKWNAWRATLKHKYFNNPWAIVSFCAAVILLVLTFSQSFYAVYAYYKPPS", "length": 531, "header": "tr|Q9SN06-1|Q9SN06_ARATH Isoform 1 of Transmembrane protein, putative (DUF247) OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SN06-1" }, "locus": { "chromosome": "3", "start_pos": 18585000, "end_pos": 18587352, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G50120.1", "url": "https://www.ensemblgenomes.org/id/AT3G50120.1" }, { "database": "Ensembl Peptide", "id": "AT3G50120.1", "url": "https://www.ensemblgenomes.org/id/AT3G50120.1" } ] } } ], "glycosylation": [], "phosphorylation": [ { "start_pos": 48, "end_pos": 48, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SN06", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SN06" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" } ], "site_lbl": "Ser48" }, { "start_pos": 60, "end_pos": 60, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Thr", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SN06", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SN06" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" } ], "site_lbl": "Thr60" }, { "start_pos": 76, "end_pos": 76, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SN06", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SN06" } ], "site_lbl": "Ser76" } ], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9SN06", "url": "https://www.uniprot.org/uniprotkb/Q9SN06" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Large-scale comparative phosphoproteomics identifies conserved phosphorylation sites in plants.", "journal": "Plant physiology", "date": "2010-07", "authors": "Nakagami Hirofumi, Sugiyama Naoyuki, Mochida Keiichi, Daudi Arsalan, Yoshida Yuko, Toyoda Tetsuro, Tomita Masaru, Ishihama Yasushi, Shirasu Ken", "evidence": [ { "database": "iPTMnet", "id": "Q9SN06", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SN06" } ], "reference": [ { "type": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9SN06", "url": "https://www.uniprot.org/uniprotkb/Q9SN06" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G50120", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G50120", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "cell wall polysaccharide metabolic process", "id": "GO:0010383", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010383", "evidence": [ { "database": "UniProtKB", "id": "Q9SN06", "url": "https://www.uniprot.org/uniprotkb/Q9SN06" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 117, "end_pos": 119, "annotation": "n_glycosylation_sequon" }, { "start_pos": 259, "end_pos": 261, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [ 48, 60, 76 ], "sequon_annotation_sites": [ { "start_pos": 117, "end_pos": 119 }, { "start_pos": 259, "end_pos": 261 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": 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"total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 3 }, { "field": "total_sites", "count": 3 } ], "sort_fields": [ "start_pos", "end_pos", "kinase_uniprot_canonical_ac", "kinase_gene_name", "residue", "comment", "site_lbl" ] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 3 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "Q9SN15-1", "uniprot_ac": "Q9SN15", "uniprot_id": "Q9SN15_ARATH", "mass": { "chemical_mass": 57331.0, "monoisotopic_mass": 57331.0 }, "refseq": { "ac": "NP_190572", "name": "ARM-repeat/Tetratricopeptide repeat (TPR)-like protein", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_190572" }, "gene_names": [], "protein_names": [ { "name": "ARM-repeat/Tetratricopeptide repeat (TPR)-like protein", "type": "synonym", "evidence": [ { "id": "NP_190572", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_190572" }, { "id": "Q9SN15", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SN15/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9SN15", "url": "https://www.uniprot.org/uniprotkb/Q9SN15" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9SN15", "locus": {} } ], "crossref": [ { "id": "AT3G50030", "url": "https://bar.utoronto.ca/thalemine/portal.do?externalids=AT3G50030", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "824165", "url": "https://www.ncbi.nlm.nih.gov/gene/824165", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR011989", "url": "https://www.ebi.ac.uk/interpro/entry/IPR011989", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR011990", "url": "https://www.ebi.ac.uk/interpro/entry/IPR011990", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR016024", "url": "https://www.ebi.ac.uk/interpro/entry/IPR016024", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR058868", "url": "https://www.ebi.ac.uk/interpro/entry/IPR058868", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT3G50030", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G50030", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "FECMSKL", "url": "https://omabrowser.org/oma/group/FECMSKL/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR46578", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR46578", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR46578:SF4", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR46578:SF4", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF26524", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF26524", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_190572", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_190572", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G50030", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G50030", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9SN15", "url": "https://www.uniprot.org/uniprotkb/Q9SN15", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9SN15-1", "url": "https://www.uniprot.org/uniprotkb/Q9SN15-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MLKFDEPKCTNPSCFFCSMKDTNPFRRRSKLAAIFKEIPRTESKDHVLVLSGLWNIAMSEPDDPEFPSLGLFECMSKLIHKSIKNSVWLLKDQNIFIPYYAAHIIGSYVMNKEDLAAMAVDSKVFLVPALLELLRGKISWVEQRAAARALGHLASHEKSFEAVSLFEEEIVKLAMEIATNCLKNVYKSFLGVEDRGRLKYQSDLLTRGLGGFETENQKAEEWGIQLQCWSLFLLNCFASRVNRKSPGGLGLIKSLCKTELGRKRVSEVREVIERLCDLSRSSDDWKETALDTLLLLLKDSNVRVAQIVLQDYHKIKYSGLKMTTEEAHRSIENLWEIKVERKKKEKLMSETELEERRKMVKSLKKQGKKKFLKGFVKEAMEIYTVGIDLCPLDMLRDRVVLFSNRAQCYLLLKKVESAISDATRALCLSGVNNPHGKSLWRRSQAFDLKGSTRESLMDCLAFVDHRVKHSNTQRIPYYAAQMIRKQMSATCIFSGVVSNSR", "length": 501, "header": "tr|Q9SN15-1|Q9SN15_ARATH Isoform 1 of ARM-repeat/Tetratricopeptide repeat (TPR)-like protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SN15-1" }, "isoforms": [ { "isoform_ac": "Q9SN15-1", "url": 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"Ensembl Peptide", "id": "AT3G50030.1", "url": "https://www.ensemblgenomes.org/id/AT3G50030.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9SN15", "url": "https://www.uniprot.org/uniprotkb/Q9SN15" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9SN15", "url": "https://www.uniprot.org/uniprotkb/Q9SN15" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G50030", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G50030", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q9SN15", "url": "https://www.uniprot.org/uniprotkb/Q9SN15" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "Q9SN15", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SN15" }, { "id": "PF26524", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF26524" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "ARM repeat N-terminal plant", "eco_id": "ECO_0000259", "start_pos": 7, "end_pos": 241, "start_aa": "Pro", "end_aa": "Val", "glycosite_overlap": [] } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [], "sequence_features": { "n_linked_sites": [], "o_linked_sites": 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"tr|Q9SN16-1|Q9SN16_ARATH Isoform 1 of Serine protease inhibitor, potato inhibitor I-type family protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SN16-1" }, "locus": { "chromosome": "3", "start_pos": 18542060, "end_pos": 18542690, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G50020.1", "url": "https://www.ensemblgenomes.org/id/AT3G50020.1" }, { "database": "Ensembl Peptide", "id": "AT3G50020.1", "url": "https://www.ensemblgenomes.org/id/AT3G50020.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, 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"https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G50020", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G50020", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "serine-type endopeptidase inhibitor activity", "id": "GO:0004867", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004867", "evidence": [ { "database": "UniProtKB", "id": "Q9SN16", "url": "https://www.uniprot.org/uniprotkb/Q9SN16" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 2, "go_terms": [ { "name": "defense response", "id": "GO:0006952", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006952", "evidence": [ { "database": "UniProtKB", "id": "Q9SN16", "url": "https://www.uniprot.org/uniprotkb/Q9SN16" } ], "pmid": "" }, { "name": "response to wounding", "id": "GO:0009611", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009611", "evidence": [ { 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"Q9SN17", "url": "https://www.uniprot.org/uniprotkb/Q9SN17", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9SN17-1", "url": "https://www.uniprot.org/uniprotkb/Q9SN17-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MDPDPDSESELLSLLTQLMFVEYFNLYWDATPLLTELILLVSSMDLDSQPKPESEFMSLTTQAISLFNSMDLESQSKLLSDLMSMVFQNLSLFNSALDSEATTLFGKIISLVSSMDLTTEEKPESDELVLLIQEILSLVNSRDSDSQPKRLVELISFISQKISLIDETLEVKPEPELISLTHQILSLVVSMNSNSGEYISLCPQAQVKLENGRFRVLEDVSWRTNNKWHCLSVNWRTFKLSREEDTLHFICIGCNGDNHKEFNNVPVEINHPLHPNHSLQLVVLQEDSTRECYCCDEALSRILYYCSACDFAISILCARKPPVFLINHHRPEWHGHPLALFPRQAFLTCNLCALADPSSPIYMCPPCDFVTHLRCINLPRVIKISRHSHRIYFTSSFEKEGLSCGVCRRKINKLYGGYSCIKNGCWYAAHSRCATQKNVWDGVELEGVPEENEEEVDPPFATKGSGVIRHFTHRHLLRLDVDTGRDYDEDKLCNICITPIYFGNFYSCTPSCDYNLHETCANFPRKIDHPIHPHQLNLEAGYGDGEINEYECSVCPRKRTVGFLYRCRKCFYLHVQCAIASEPLDHPSHIHPLYLTSKPDEEQRKCSVCKKSGHCPTKETFNCIEECDFALCFECATLAQKVRYKHDKHVLTLSYGDKTSTMTYWCEICEERLNPKERFYSCDEYCCVTIHIECLVGVDFYMKPGSKWFNKYGAEVSVLPNNHHMSRPFCFICKKRCPHKTFFQCNGFEYCSRSCLLTKSKEVIYLGGH", "length": 769, "header": "tr|Q9SN17-1|Q9SN17_ARATH Isoform 1 of Cysteine/Histidine-rich C1 domain family protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9SN17-1" }, "isoforms": [ { "isoform_ac": "Q9SN17-1", "url": "https://www.uniprot.org/uniprotkb/Q9SN17/entry", "sequence": { "sequence": "MDPDPDSESELLSLLTQLMFVEYFNLYWDATPLLTELILLVSSMDLDSQPKPESEFMSLTTQAISLFNSMDLESQSKLLSDLMSMVFQNLSLFNSALDSEATTLFGKIISLVSSMDLTTEEKPESDELVLLIQEILSLVNSRDSDSQPKRLVELISFISQKISLIDETLEVKPEPELISLTHQILSLVVSMNSNSGEYISLCPQAQVKLENGRFRVLEDVSWRTNNKWHCLSVNWRTFKLSREEDTLHFICIGCNGDNHKEFNNVPVEINHPLHPNHSLQLVVLQEDSTRECYCCDEALSRILYYCSACDFAISILCARKPPVFLINHHRPEWHGHPLALFPRQAFLTCNLCALADPSSPIYMCPPCDFVTHLRCINLPRVIKISRHSHRIYFTSSFEKEGLSCGVCRRKINKLYGGYSCIKNGCWYAAHSRCATQKNVWDGVELEGVPEENEEEVDPPFATKGSGVIRHFTHRHLLRLDVDTGRDYDEDKLCNICITPIYFGNFYSCTPSCDYNLHETCANFPRKIDHPIHPHQLNLEAGYGDGEINEYECSVCPRKRTVGFLYRCRKCFYLHVQCAIASEPLDHPSHIHPLYLTSKPDEEQRKCSVCKKSGHCPTKETFNCIEECDFALCFECATLAQKVRYKHDKHVLTLSYGDKTSTMTYWCEICEERLNPKERFYSCDEYCCVTIHIECLVGVDFYMKPGSKWFNKYGAEVSVLPNNHHMSRPFCFICKKRCPHKTFFQCNGFEYCSRSCLLTKSKEVIYLGGH", "length": 769, "header": "tr|Q9SN17-1|Q9SN17_ARATH Isoform 1 of Cysteine/Histidine-rich C1 domain family protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9SN17-1" }, "locus": { "chromosome": "3", "start_pos": 18537058, "end_pos": 18539648, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G50010.1", "url": "https://www.ensemblgenomes.org/id/AT3G50010.1" }, { "database": "Ensembl Peptide", "id": "AT3G50010.1", "url": "https://www.ensemblgenomes.org/id/AT3G50010.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9SN17", "url": "https://www.uniprot.org/uniprotkb/Q9SN17" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9SN17", "url": "https://www.uniprot.org/uniprotkb/Q9SN17" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G50010", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G50010", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q9SN17", "url": "https://www.uniprot.org/uniprotkb/Q9SN17" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 276, "end_pos": 278, "annotation": "n_glycosylation_sequon" }, { "start_pos": 89, "end_pos": 91, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "Q9SN17", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SN17" }, { "id": "PF03107", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF03107" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "DC1", "eco_id": "ECO_0000259", "start_pos": 272, "end_pos": 318, "start_aa": "Pro", "end_aa": "Ala", "glycosite_overlap": [] }, { "evidence": [ { "id": "Q9SN17", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SN17" }, { "id": "PF22926", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF22926" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "DC1-like C-terminal", "eco_id": "ECO_0000259", "start_pos": 716, "end_pos": 756, "start_aa": "Val", "end_aa": "Leu", "glycosite_overlap": [] } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 276, "end_pos": 278 }, { "start_pos": 89, "end_pos": 91 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": 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"publication", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "Q9SN20-1", "uniprot_ac": "Q9SN20", "uniprot_id": "FB200_ARATH", "mass": { "chemical_mass": 44870.0, "monoisotopic_mass": 44870.0 }, "refseq": { "ac": "NP_190567", "name": "F-box and associated interaction domains-containing protein", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_190567" }, "gene_names": [ { "name": "F3A4.60", "type": "synonym", "evidence": [ { "id": "Q9SN20", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SN20" } ] } ], "protein_names": [ { "name": "Putative F-box protein At3g49980", "type": "recommended", "evidence": [ { "id": "Q9SN20", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SN20/entry#names_and_taxonomy" } ] }, { "name": "F-box and associated interaction domains-containing protein", "type": "synonym", "evidence": [ { "id": "NP_190567", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_190567" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9SN20", "url": "https://www.uniprot.org/uniprotkb/Q9SN20" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9SN20", "locus": {} } ], "crossref": [ { "id": "Q9SN20", "url": "https://alphafold.ebi.ac.uk/entry/Q9SN20", "database": "AlphaFoldDB", "categories": [] }, { "id": "AT3G49980", "url": "https://bar.utoronto.ca/thalemine/portal.do?externalids=AT3G49980", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "cd22157", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd22157", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "824160", "url": "https://www.ncbi.nlm.nih.gov/gene/824160", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR001810", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001810", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR006527", "url": "https://www.ebi.ac.uk/interpro/entry/IPR006527", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR011043", "url": "https://www.ebi.ac.uk/interpro/entry/IPR011043", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR017451", "url": "https://www.ebi.ac.uk/interpro/entry/IPR017451", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036047", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036047", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR050796", "url": "https://www.ebi.ac.uk/interpro/entry/IPR050796", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT3G49980", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G49980", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "ATHPIRW", "url": "https://omabrowser.org/oma/group/ATHPIRW/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR31672", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31672", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR31672:SF13", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31672:SF13", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00646", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00646", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF07734", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF07734", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PR:Q9SN20", "url": "https://proconsortium.org/cgi-bin/entry_pro?id=PR:Q9SN20", "database": "PRO", "categories": [ "Protein" ] }, { "id": "NP_190567", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_190567", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G49980", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G49980", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "A0A1I9LP00", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LP00", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A1I9LP00-1", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LP00-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9SN20", "url": "https://www.uniprot.org/uniprotkb/Q9SN20", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9SN20-1", "url": "https://www.uniprot.org/uniprotkb/Q9SN20-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MVLNLPQELLEEILCRVPATSLKQLRLTCKEWNRLFNDRTFSRKHFDKAPKQFLITVLEERCRLSSLSINLHSGFPSEEFTGELSPIDYHSNSSQVIIMKIFHCDGLFVCTILKDTRIVVWNPCTGQKKWIQTGENLDENGQDFVLGYYQDNKSSDKSYKILSYKGYNYGDQEFKIYDIKSNTWRNLDVTPIPGNYFTCSDYRVSLKGNTYWFAYDLKDEQLGLISFDYTTERFERLWLPFQCDISDHDYSLSVVGEEKLSVVLQLKDAPRREIWITNKMDDETKEMSWRKLFEVEVGTRYYMWSGRPFLVDEEKKIVVCCEKCQKKCQPVITVSMVEADSNATRVYFPVVTMTSYWPHFVDYVPSLIQIQQSEANEKELNS", "length": 382, "header": "sp|Q9SN20-1|FB200_ARATH Isoform 1 of Putative F-box protein At3g49980 OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9SN20-1" }, "isoforms": [ { "isoform_ac": "A0A1I9LP00-1", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LP00/entry", "sequence": { "sequence": "MMVLNLPQELLEEILCRVPATSLKQLRLTCKEWNRLFNDRTFSRKHFDKAPKQFLITVLEERCRLSSLSINLHSGFPSEEFTGELSPIDYHSNSSQVIIMKIFHCDGLFVCTILKDTRIVVWNPCTGQKKWIQTGENLDENGQDFVLGYYQDNKSSDKSYKILSYKGYNYGDQEFKIYDIKSNTWRNLDVTPIPGNYFTCSDYRVSLKGNTYWFAYDLKDEQLGLISFDYTTERFERLWLPFQCDISDHDYSLSVVGEEKLSVVLQLKDAPRREIWITNKMDDETKEMSWRKLFEVEVGTRYYMWSGRPFLVDEEKKIVVCCEKCQKKCQPVITVSMVEADSNATRVYFPVVTMTSYWPHFVDYVPSLIQIQQSEANEKELNS", "length": 383, "header": "tr|A0A1I9LP00-1|A0A1I9LP00_ARATH Computationally mapped isoform of F-box and associated interaction domains-containing protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9SN20-1" }, "locus": { "chromosome": "3", "start_pos": 18530290, "end_pos": 18531634, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G49980.2", "url": "https://www.ensemblgenomes.org/id/AT3G49980.2" }, { "database": "Ensembl Peptide", "id": "AT3G49980.2", "url": "https://www.ensemblgenomes.org/id/AT3G49980.2" } ] } }, { "isoform_ac": "Q9SN20-1", "url": "https://www.uniprot.org/uniprotkb/Q9SN20/entry#Q9SN20-1", "sequence": { "sequence": "MVLNLPQELLEEILCRVPATSLKQLRLTCKEWNRLFNDRTFSRKHFDKAPKQFLITVLEERCRLSSLSINLHSGFPSEEFTGELSPIDYHSNSSQVIIMKIFHCDGLFVCTILKDTRIVVWNPCTGQKKWIQTGENLDENGQDFVLGYYQDNKSSDKSYKILSYKGYNYGDQEFKIYDIKSNTWRNLDVTPIPGNYFTCSDYRVSLKGNTYWFAYDLKDEQLGLISFDYTTERFERLWLPFQCDISDHDYSLSVVGEEKLSVVLQLKDAPRREIWITNKMDDETKEMSWRKLFEVEVGTRYYMWSGRPFLVDEEKKIVVCCEKCQKKCQPVITVSMVEADSNATRVYFPVVTMTSYWPHFVDYVPSLIQIQQSEANEKELNS", "length": 382, "header": "sp|Q9SN20-1|FB200_ARATH Isoform 1 of Putative F-box protein At3g49980 OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9SN20-1" }, "locus": { "chromosome": "3", "start_pos": 18530329, "end_pos": 18531477, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G49980.1", "url": "https://www.ensemblgenomes.org/id/AT3G49980.1" }, { "database": "Ensembl Peptide", "id": "AT3G49980.1", "url": "https://www.ensemblgenomes.org/id/AT3G49980.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9SN20", "url": "https://www.uniprot.org/uniprotkb/Q9SN20" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9SN20", "url": "https://www.uniprot.org/uniprotkb/Q9SN20" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G49980", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G49980", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": {}, "pro_annotation": [], "site_annotation": [ { "start_pos": 152, "end_pos": 154, "annotation": "n_glycosylation_sequon" }, { "start_pos": 342, "end_pos": 344, "annotation": "n_glycosylation_sequon" }, { "start_pos": 92, "end_pos": 94, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-Q9SN20-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 382, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-Q9SN20-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/Q9SN20" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "Q9SN20", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SN20" }, { "id": "PRU00080", "database": "PROSITE", "url": "https://prosite.expasy.org/PRU00080" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "F-box", "eco_id": "ECO_0000255", "start_pos": 1, "end_pos": 49, "start_aa": "Met", "end_aa": "Ala", "glycosite_overlap": [] } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 152, "end_pos": 154 }, { "start_pos": 342, "end_pos": 344 }, { "start_pos": 92, "end_pos": 94 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "Q9SN25-1", "uniprot_ac": "Q9SN25", "uniprot_id": "Q9SN25_ARATH", "mass": { "chemical_mass": 84877.0, "monoisotopic_mass": 84877.0 }, "refseq": { "ac": "NP_001319892", "name": "TTF-type zinc finger protein with HAT dimerization domain-containing protein", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001319892" }, "gene_names": [ { "name": "T9A4.11", "type": "synonym", "evidence": [ { "id": "NP_001319892", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001319892" }, { "id": "Q9SN25", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SN25" } ] } ], "protein_names": [ { "name": "TTF-type zinc finger protein with HAT dimerization domain-containing protein", "type": "synonym", "evidence": [ { "id": "NP_001319892", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001319892" }, { "id": "Q9SN25", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SN25/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9SN25", "url": "https://www.uniprot.org/uniprotkb/Q9SN25" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9SN25", "locus": {} } ], "crossref": [ { "id": "AT4G10200", "url": "https://bar.utoronto.ca/thalemine/portal.do?externalids=AT4G10200", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "826611", "url": "https://www.ncbi.nlm.nih.gov/gene/826611", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR006580", "url": "https://www.ebi.ac.uk/interpro/entry/IPR006580", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR008906", "url": "https://www.ebi.ac.uk/interpro/entry/IPR008906", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR012337", "url": "https://www.ebi.ac.uk/interpro/entry/IPR012337", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR025398", "url": "https://www.ebi.ac.uk/interpro/entry/IPR025398", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT4G10200", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT4G10200", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "NMRGINK", "url": "https://omabrowser.org/oma/group/NMRGINK/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR45749", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR45749", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR45749:SF35", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR45749:SF35", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF05699", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF05699", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF14291", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF14291", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_001319892", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001319892", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT4G10200", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT4G10200", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9SN25", "url": "https://www.uniprot.org/uniprotkb/Q9SN25", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9SN25-1", "url": "https://www.uniprot.org/uniprotkb/Q9SN25-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MTKSLADSMLRYVKRSTPLKPNENPTSVENDKAEEICEDTDVNMNTIPECVYSGEKDELLEITDPANWKNIDRELRDFLVEKGPMKRVHEKYAFPKTAGIRRHFSHRYYKREMKNGDKQDRNWLLYSKVSDKVYCFCCKLFGRDQDAMQLSSTGFNDWRNIRIRLSQHETSHRHIVCMSKWMELELRLRKHLTIDKCLQKDINIEKNHWREVLLRIFSLVKNLAKQNLAFRGENEKIGQKNNGNFRVLLNRSATLIQSYESISDELKKVQLMIIKKIQEAKYFSVILDCTPDKSHKEQMSLIIRCVDVSMASTQVSEFFLTFVEVSDKSGEGLFELLCDTLVALNLNINDVRGQGYDNGCNMKGKHKGVQKKLLDINSRAFYTPCGCHSLNLPSHLKKRLNSLESFSGFTACFHHLQQGLKIRDALDYLAENCDDPKARSDADCLATSETHRIGGFEFLFGMVIWYNLLFTMNTVSKALQSENIDIELALVQLKGLVSYLQNYRETGFQEAKAEATLIAESMDIEPKFPVKRKRIIKRKRHFDEEMENDVETELLSEEENFKVRFEQFEEYGRIFRFLFDLRKLKSASDDGLKAACINLETSLKHGDSSDVDGNHLFLELKVLKELLPTEITKAIEVLNFLKKFEGCYPNTWIAFRVMLTVPVSVASAERSFSKLKLIKSYSRSTMSEERLNALAILSIERDLVGELDYISLMNDFAAKTARRSIFEIRDDDE", "length": 733, "header": "tr|Q9SN25-1|Q9SN25_ARATH Isoform 1 of TTF-type zinc finger protein with HAT dimerization domain-containing protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9SN25-1" }, "isoforms": [ { "isoform_ac": "Q9SN25-1", "url": "https://www.uniprot.org/uniprotkb/Q9SN25/entry", "sequence": { "sequence": "MTKSLADSMLRYVKRSTPLKPNENPTSVENDKAEEICEDTDVNMNTIPECVYSGEKDELLEITDPANWKNIDRELRDFLVEKGPMKRVHEKYAFPKTAGIRRHFSHRYYKREMKNGDKQDRNWLLYSKVSDKVYCFCCKLFGRDQDAMQLSSTGFNDWRNIRIRLSQHETSHRHIVCMSKWMELELRLRKHLTIDKCLQKDINIEKNHWREVLLRIFSLVKNLAKQNLAFRGENEKIGQKNNGNFRVLLNRSATLIQSYESISDELKKVQLMIIKKIQEAKYFSVILDCTPDKSHKEQMSLIIRCVDVSMASTQVSEFFLTFVEVSDKSGEGLFELLCDTLVALNLNINDVRGQGYDNGCNMKGKHKGVQKKLLDINSRAFYTPCGCHSLNLPSHLKKRLNSLESFSGFTACFHHLQQGLKIRDALDYLAENCDDPKARSDADCLATSETHRIGGFEFLFGMVIWYNLLFTMNTVSKALQSENIDIELALVQLKGLVSYLQNYRETGFQEAKAEATLIAESMDIEPKFPVKRKRIIKRKRHFDEEMENDVETELLSEEENFKVRFEQFEEYGRIFRFLFDLRKLKSASDDGLKAACINLETSLKHGDSSDVDGNHLFLELKVLKELLPTEITKAIEVLNFLKKFEGCYPNTWIAFRVMLTVPVSVASAERSFSKLKLIKSYSRSTMSEERLNALAILSIERDLVGELDYISLMNDFAAKTARRSIFEIRDDDE", "length": 733, "header": "tr|Q9SN25-1|Q9SN25_ARATH Isoform 1 of TTF-type zinc finger protein with HAT dimerization domain-containing protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9SN25-1" }, "locus": { "chromosome": "4", "start_pos": 6352957, "end_pos": 6355609, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT4G10200.1", "url": "https://www.ensemblgenomes.org/id/AT4G10200.1" }, { "database": "Ensembl Peptide", "id": "AT4G10200.1", "url": "https://www.ensemblgenomes.org/id/AT4G10200.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "1999", "authors": "Mayer K, Sch\u00fcller C, Wambutt R, Murphy G, Volckaert G, Pohl T, D\u00fcsterh\u00f6ft A, Stiekema W, Entian K D, Terryn N, Harris B, Ansorge W, Brandt P, Grivell L, Rieger M, Weichselgartner M, de Simone V, Obermaier B, Mache R, M\u00fcller M, Kreis M, Delseny M, Puigdomenech P, Watson M, Schmidtheini T, Reichert B, Portatelle D, Perez-Alonso M, Boutry M, Bancroft I, Vos P, Hoheisel J, Zimmermann W, Wedler H, Ridley P, Langham S A, McCullagh B, Bilham L, Robben J, Van der Schueren J, Grymonprez B, Chuang Y J, Vandenbussche F, Braeken M, Weltjens I, Voet M, Bastiaens I, Aert R, Defoor E, Weitzenegger T, Bothe G, Ramsperger U, Hilbert H, Braun M, Holzer E, Brandt A, Peters S, van Staveren M, Dirske W, Mooijman P, Klein Lankhorst R, Rose M, Hauf J, K\u00f6tter P, Berneiser S, Hempel S, Feldpausch M, Lamberth S, Van den Daele H, De Keyser A, Buysshaert C, Gielen J, Villarroel R, De Clercq R, Van Montagu M, Rogers J, Cronin A, Quail M, Bray-Allen S, Clark L, Doggett J, Hall S, Kay M, Lennard N, McLay K, Mayes R, Pettett A, Rajandream M A, Lyne M, Benes V, Rechmann S, Borkova D, Bl\u00f6cker H, Scharfe M, Grimm M, L\u00f6hnert T H, Dose S, de Haan M, Maarse A, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Fartmann B, Granderath K, Dauner D, Herzl A, Neumann S, Argiriou A, Vitale D, Liguori R, Piravandi E, Massenet O, Quigley F, Clabauld G, M\u00fcndlein A, Felber R, Schnabl S, Hiller R, Schmidt W, Lecharny A, Aubourg S, Chefdor F, Cooke R, Berger C, Montfort A, Casacuberta E, Gibbons T, Weber N, Vandenbol M, Bargues M, Terol J, Torres A, Perez-Perez A, Purnelle B, Bent E, Johnson S, Tacon D, Jesse T, Heijnen L, Schwarz S, Scholler P, Heber S, Francs P, Bielke C, Frishman D, Haase D, Lemcke K, Mewes H W, Stocker S, Zaccaria P, Bevan M, Wilson R K, de la Bastide M, Habermann K, Parnell L, Dedhia N, Gnoj L, Schutz K, Huang E, Spiegel L, Sehkon M, Murray J, Sheet P, Cordes M, Abu-Threideh J, Stoneking T, Kalicki J, Graves T, Harmon G, Edwards J, Latreille P, Courtney L, Cloud J, Abbott A, Scott K, Johnson D, Minx P, Bentley D, Fulton B, Miller N, Greco T, Kemp K, Kramer J, Fulton L, Mardis E, Dante M, Pepin K, Hillier L, Nelson J, Spieth J, Ryan E, Andrews S, Geisel C, Layman D, Du H, Ali J, Berghoff A, Jones K, Drone K, Cotton M, Joshu C, Antonoiu B, Zidanic M, Strong C, Sun H, Lamar B, Yordan C, Ma P, Zhong J, Preston R, Vil D, Shekher M, Matero A, Shah R, Swaby I K, O'Shaughnessy A, Rodriguez M, Hoffmann J, Till S, Granat S, Shohdy N, Hasegawa A, Hameed A, Lodhi M, Johnson A, Chen E, Marra M, Martienssen R, McCombie W R", "evidence": [ { "database": "UniProtKB", "id": "Q9SN25", "url": "https://www.uniprot.org/uniprotkb/Q9SN25" } ], "reference": [ { "type": "PubMed", "id": "10617198", "url": "https://glygen.org/publication/PubMed/10617198" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9SN25", "url": "https://www.uniprot.org/uniprotkb/Q9SN25" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT4G10200", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT4G10200", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q9SN25", "url": "https://www.uniprot.org/uniprotkb/Q9SN25" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "protein dimerization activity", "id": "GO:0046983", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046983", "evidence": [ { "database": "UniProtKB", "id": "Q9SN25", "url": "https://www.uniprot.org/uniprotkb/Q9SN25" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 250, "end_pos": 252, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "Q9SN25", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SN25" }, { "id": "SM00597", "database": "SMART", "url": "http://smart.embl.de/smart/do_annotation.pl?DOMAIN=SM00597" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "TTF-type", "eco_id": "ECO_0000259", "start_pos": 108, "end_pos": 193, "start_aa": "Tyr", "end_aa": "Thr", "glycosite_overlap": [] } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 250, "end_pos": 252 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "Q9SN29-1", "uniprot_ac": "Q9SN29", "uniprot_id": "Q9SN29_ARATH", "mass": { "chemical_mass": 19621.0, "monoisotopic_mass": 19621.0 }, "refseq": {}, "gene_names": [ { "name": "F28M11.60", "type": "synonym", "evidence": [ { "id": "Q9SN29", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SN29" } ] }, { "name": "F28M11_60", "type": "synonym", "evidence": [ { "id": "Q9SN29", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SN29" } ] } ], "protein_names": [ { "name": "Transmembrane protein", "type": "synonym", "evidence": [ { "id": "Q9SN29", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SN29/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9SN29", "url": "https://www.uniprot.org/uniprotkb/Q9SN29" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9SN29", "locus": {} } ], "crossref": [ { "id": "826605", "url": "https://www.ncbi.nlm.nih.gov/gene/826605", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "Q9SN29", "url": "https://www.ebi.ac.uk/intact/interactors/id:Q9SN29*", "database": "IntAct", "categories": [ "Other" ] }, { "id": "IPR018639", "url": "https://www.ebi.ac.uk/interpro/entry/IPR018639", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT4G10140", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT4G10140", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "CHAPTMM", "url": "https://omabrowser.org/oma/group/CHAPTMM/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "Q9SN29", "url": "https://www.orthodb.org/?gene=Q9SN29", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR35102", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR35102", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR35102:SF5", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR35102:SF5", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF09835", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF09835", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "AT4G10140", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT4G10140", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9SN29", "url": "https://www.uniprot.org/uniprotkb/Q9SN29", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9SN29-1", "url": "https://www.uniprot.org/uniprotkb/Q9SN29-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MGLSKGRLKAWFNKKITDPLLQILRRGTEPKQLAFSAALGITLGIFPICGVPVLLCGVAFALLGSSCHAPTVMLANIIATPVELALVVPFLRLGEKVTGGPHFPLTSDALKKVFTGQASQEVFLSIGNALLGWLVATPFFFITLYVVLLPCFTILVRKFGGVASTQKLPTSMETELNPKPRDA", "length": 183, "header": "tr|Q9SN29-1|Q9SN29_ARATH Isoform 1 of Transmembrane protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SN29-1" }, "isoforms": [ { "isoform_ac": "Q9SN29-1", "url": "https://www.uniprot.org/uniprotkb/Q9SN29/entry", "sequence": { "sequence": "MGLSKGRLKAWFNKKITDPLLQILRRGTEPKQLAFSAALGITLGIFPICGVPVLLCGVAFALLGSSCHAPTVMLANIIATPVELALVVPFLRLGEKVTGGPHFPLTSDALKKVFTGQASQEVFLSIGNALLGWLVATPFFFITLYVVLLPCFTILVRKFGGVASTQKLPTSMETELNPKPRDA", "length": 183, "header": "tr|Q9SN29-1|Q9SN29_ARATH Isoform 1 of Transmembrane protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SN29-1" }, "locus": { "chromosome": "4", "start_pos": 6322313, "end_pos": 6324694, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT4G10140.1", "url": "https://www.ensemblgenomes.org/id/AT4G10140.1" }, { "database": "Ensembl Peptide", "id": "AT4G10140.1", "url": "https://www.ensemblgenomes.org/id/AT4G10140.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "1999", "authors": "Mayer K, Sch\u00fcller C, Wambutt R, Murphy G, Volckaert G, Pohl T, D\u00fcsterh\u00f6ft A, Stiekema W, Entian K D, Terryn N, Harris B, Ansorge W, Brandt P, Grivell L, Rieger M, Weichselgartner M, de Simone V, Obermaier B, Mache R, M\u00fcller M, Kreis M, Delseny M, Puigdomenech P, Watson M, Schmidtheini T, Reichert B, Portatelle D, Perez-Alonso M, Boutry M, Bancroft I, Vos P, Hoheisel J, Zimmermann W, Wedler H, Ridley P, Langham S A, McCullagh B, Bilham L, Robben J, Van der Schueren J, Grymonprez B, Chuang Y J, Vandenbussche F, Braeken M, Weltjens I, Voet M, Bastiaens I, Aert R, Defoor E, Weitzenegger T, Bothe G, Ramsperger U, Hilbert H, Braun M, Holzer E, Brandt A, Peters S, van Staveren M, Dirske W, Mooijman P, Klein Lankhorst R, Rose M, Hauf J, K\u00f6tter P, Berneiser S, Hempel S, Feldpausch M, Lamberth S, Van den Daele H, De Keyser A, Buysshaert C, Gielen J, Villarroel R, De Clercq R, Van Montagu M, Rogers J, Cronin A, Quail M, Bray-Allen S, Clark L, Doggett J, Hall S, Kay M, Lennard N, McLay K, Mayes R, Pettett A, Rajandream M A, Lyne M, Benes V, Rechmann S, Borkova D, Bl\u00f6cker H, Scharfe M, Grimm M, L\u00f6hnert T H, Dose S, de Haan M, Maarse A, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Fartmann B, Granderath K, Dauner D, Herzl A, Neumann S, Argiriou A, Vitale D, Liguori R, Piravandi E, Massenet O, Quigley F, Clabauld G, M\u00fcndlein A, Felber R, Schnabl S, Hiller R, Schmidt W, Lecharny A, Aubourg S, Chefdor F, Cooke R, Berger C, Montfort A, Casacuberta E, Gibbons T, Weber N, Vandenbol M, Bargues M, Terol J, Torres A, Perez-Perez A, Purnelle B, 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"https://www.uniprot.org/uniprotkb/Q9SN53", "locus": {} } ], "crossref": [ { "id": "AT4G11020", "url": "https://bar.utoronto.ca/thalemine/portal.do?externalids=AT4G11020", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "826703", "url": "https://www.ncbi.nlm.nih.gov/gene/826703", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "ath:AT4G11020", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT4G11020", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "QKLCRRW", "url": "https://omabrowser.org/oma/group/QKLCRRW/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR35704", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR35704", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR35704:SF11", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR35704:SF11", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "NP_192840", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_192840", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT4G11020", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT4G11020", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9SN53", "url": "https://www.uniprot.org/uniprotkb/Q9SN53", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9SN53-1", "url": "https://www.uniprot.org/uniprotkb/Q9SN53-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MGNCLVGRNNENIAEEEEEKFEEVMKKDYKRKDRKLKIVLRRDELEKIILFQLNADGANKGGDAKLASFGVFLRELEAERLAGEAAAAVAKEEKSSRRLCRRWKPSLESVIEWPEEIVVNEIDENEEDNGAYNNDELNLGLNSQVLKMIYLSFIFCGQK", "length": 159, "header": "tr|Q9SN53-1|Q9SN53_ARATH Isoform 1 of Uncharacterized protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9SN53-1" }, "isoforms": [ { "isoform_ac": "Q9SN53-1", "url": "https://www.uniprot.org/uniprotkb/Q9SN53/entry", "sequence": { "sequence": "MGNCLVGRNNENIAEEEEEKFEEVMKKDYKRKDRKLKIVLRRDELEKIILFQLNADGANKGGDAKLASFGVFLRELEAERLAGEAAAAVAKEEKSSRRLCRRWKPSLESVIEWPEEIVVNEIDENEEDNGAYNNDELNLGLNSQVLKMIYLSFIFCGQK", "length": 159, "header": "tr|Q9SN53-1|Q9SN53_ARATH Isoform 1 of Uncharacterized protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9SN53-1" }, "locus": { "chromosome": "4", "start_pos": 6734689, "end_pos": 6736075, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT4G11020.1", "url": "https://www.ensemblgenomes.org/id/AT4G11020.1" }, { "database": "Ensembl Peptide", "id": "AT4G11020.1", "url": "https://www.ensemblgenomes.org/id/AT4G11020.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "1999", "authors": "Mayer K, Sch\u00fcller C, Wambutt R, Murphy G, Volckaert G, Pohl T, D\u00fcsterh\u00f6ft A, Stiekema W, Entian K D, Terryn N, Harris B, Ansorge W, Brandt P, Grivell L, Rieger M, Weichselgartner M, de Simone V, Obermaier B, Mache R, M\u00fcller M, Kreis M, Delseny M, Puigdomenech P, Watson M, Schmidtheini T, Reichert B, Portatelle D, Perez-Alonso M, Boutry M, Bancroft I, Vos P, Hoheisel J, Zimmermann W, Wedler H, Ridley P, Langham S A, McCullagh B, Bilham L, Robben J, Van der Schueren J, Grymonprez B, Chuang Y J, Vandenbussche F, Braeken M, Weltjens I, Voet M, Bastiaens I, Aert R, Defoor E, Weitzenegger T, Bothe G, Ramsperger U, Hilbert H, Braun M, Holzer E, Brandt A, Peters S, van Staveren M, Dirske W, Mooijman P, Klein Lankhorst R, Rose M, Hauf J, K\u00f6tter P, Berneiser S, Hempel S, Feldpausch M, Lamberth S, Van den Daele H, De Keyser A, Buysshaert C, Gielen J, Villarroel R, De Clercq R, Van Montagu M, Rogers J, Cronin A, Quail M, Bray-Allen S, Clark L, Doggett J, Hall S, Kay M, Lennard N, McLay K, Mayes R, Pettett A, Rajandream M A, Lyne M, Benes V, Rechmann S, Borkova D, Bl\u00f6cker H, Scharfe M, Grimm M, L\u00f6hnert T H, Dose S, de Haan M, Maarse A, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Fartmann B, Granderath K, Dauner D, Herzl A, Neumann S, Argiriou A, Vitale D, Liguori R, Piravandi E, Massenet O, Quigley F, Clabauld G, M\u00fcndlein A, Felber R, Schnabl S, Hiller R, Schmidt W, Lecharny A, Aubourg S, Chefdor F, Cooke R, Berger C, Montfort A, Casacuberta E, Gibbons T, Weber N, Vandenbol M, Bargues M, Terol J, Torres A, Perez-Perez A, Purnelle B, Bent E, Johnson S, Tacon D, Jesse T, Heijnen L, Schwarz S, Scholler P, Heber S, Francs P, Bielke C, Frishman D, Haase D, Lemcke K, Mewes H W, Stocker S, Zaccaria P, Bevan M, Wilson R K, de la Bastide M, Habermann K, Parnell L, Dedhia N, Gnoj L, Schutz K, Huang E, Spiegel L, Sehkon M, Murray J, Sheet P, Cordes M, Abu-Threideh J, Stoneking T, Kalicki J, Graves T, Harmon G, Edwards J, Latreille P, Courtney L, Cloud J, Abbott A, Scott K, Johnson D, Minx P, Bentley D, Fulton B, Miller N, Greco T, Kemp K, Kramer J, Fulton L, Mardis E, Dante M, Pepin K, Hillier L, Nelson J, Spieth J, Ryan E, Andrews S, Geisel C, Layman D, Du H, Ali J, Berghoff A, Jones K, Drone K, Cotton M, Joshu C, Antonoiu B, Zidanic M, Strong C, Sun H, Lamar B, Yordan C, Ma P, Zhong J, Preston R, Vil D, Shekher M, Matero A, Shah R, Swaby I K, O'Shaughnessy A, Rodriguez M, Hoffmann J, Till S, Granat S, Shohdy N, Hasegawa A, Hameed A, Lodhi M, Johnson A, Chen E, Marra M, Martienssen R, McCombie W R", "evidence": [ { "database": "UniProtKB", "id": "Q9SN53", "url": "https://www.uniprot.org/uniprotkb/Q9SN53" } ], "reference": [ { "type": "PubMed", "id": "10617198", "url": "https://glygen.org/publication/PubMed/10617198" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9SN53", "url": "https://www.uniprot.org/uniprotkb/Q9SN53" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT4G11020", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT4G11020", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q9SN53", "url": "https://www.uniprot.org/uniprotkb/Q9SN53" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "Q9SN57-1", "uniprot_ac": "Q9SN57", "uniprot_id": "Q9SN57_ARATH", "mass": { "chemical_mass": 24508.0, "monoisotopic_mass": 24508.0 }, "refseq": { "ac": "NP_001118964", "name": "ribosome maturation factor", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001118964" }, "gene_names": [ { "name": "UIEF1", "type": "recommended", "evidence": [ { "id": "Q9SN57", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SN57" } ] }, { "name": "F25I24.180", "type": "synonym", "evidence": [ { "id": "NP_001118964", "database": "RefSeq", "url": 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"evidence": [ { "database": "UniProtKB", "id": "Q9SN57", "url": "https://www.uniprot.org/uniprotkb/Q9SN57" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "UIEF1", "url": "https://www.uniprot.org/uniprotkb/Q9SN57", "locus": {} } ], "crossref": [ { "id": "AT4G10970", "url": "https://bar.utoronto.ca/thalemine/portal.do?externalids=AT4G10970", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "826698", "url": "https://www.ncbi.nlm.nih.gov/gene/826698", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "ath:AT4G10970", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT4G10970", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "NRVPNWK", "url": "https://omabrowser.org/oma/group/NRVPNWK/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR36048", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR36048", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR36048:SF1", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR36048:SF1", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "NP_001118964", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001118964", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT4G10970", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT4G10970", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "F4JN75", "url": "https://www.uniprot.org/uniprotkb/F4JN75", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F4JN75-1", "url": "https://www.uniprot.org/uniprotkb/F4JN75-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F4JN76", "url": "https://www.uniprot.org/uniprotkb/F4JN76", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F4JN76-1", "url": "https://www.uniprot.org/uniprotkb/F4JN76-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9SN57", "url": "https://www.uniprot.org/uniprotkb/Q9SN57", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9SN57-1", "url": "https://www.uniprot.org/uniprotkb/Q9SN57-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MATEKPITTETVALTEKKMDMSLDEIIKMEKSNTNVNKGKKQRVLNKKEKFSGAAKNSAVKAQRYMDSRSDVRQGAFAKKRSNFQGNQFPVTTTVARKAASATPRGRPYNGGRMTNTNQSRFIAPPAQNRASQRGFVGKQQQQQREKIVQQQANGGGGGQRQWPQTLDSRFANMKEERMRMRRFADNRSNVGNNGAGSHQQQRSMVPWVRRATRFPN", "length": 217, "header": "tr|Q9SN57-1|Q9SN57_ARATH Isoform 1 of Ribosome maturation factor OS=Arabidopsis thaliana OX=3702 GN=UIEF1 PE=1 SV=1 CANONICAL=Q9SN57-1" }, "isoforms": [ { "isoform_ac": "F4JN75-1", "url": "https://www.uniprot.org/uniprotkb/F4JN75/entry", "sequence": { "sequence": "MDMSLDEIIKMEKSNTNVNKGKKQRVLNKKEKFSGAAKNSAVKAQRYMDSRSDVRQGAFAKKRSNFQGNQFPVTTTVARKAASATPRGRPYNGGRMTNTNQSSWSIVGRLKWVDARFIAPPAQNRASQRGFVGKQQQQQREKIVQQQANGGGGGQRQWPQTLDSRFANMKEERMRMRRFADNRSNVGNNGAGSHQQQRSMVPWVRRATRFPN", "length": 212, "header": "tr|F4JN75-1|F4JN75_ARATH Computationally mapped isoform of Ribosome maturation factor OS=Arabidopsis thaliana OX=3702 GN=UIEF1 PE=1 SV=1 CANONICAL=Q9SN57-1" }, "locus": { "chromosome": "4", "start_pos": 6719718, "end_pos": 6721831, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT4G10970.5", "url": "https://www.ensemblgenomes.org/id/AT4G10970.5" }, { "database": "Ensembl Peptide", "id": "AT4G10970.5", "url": "https://www.ensemblgenomes.org/id/AT4G10970.5" } ] } }, { "isoform_ac": "F4JN76-1", "url": "https://www.uniprot.org/uniprotkb/F4JN76/entry", "sequence": { "sequence": "MDMSLDEIIKMEKSNTNVNKGKKQRVLNKKEKFSGAAKNSAVKAQRYMDSRSDVRQGAFAKKRSNFQGNQFPVTTTVARKAASATPRGRPYNGGRMTNTNQSSWSIVGRLKWVDARLLRQHEDSDAQIFMIEHATDHSSSCLLLIPDKVLKNYRETGVSVLVFFHSILHEPATYFLCTEGIRIMKFIAPPAQNRASQRGFVGKQQQQQREKIVQQQANGGGGGQRQWPQTLDSRFANMKEERMRMRRFADNRSNVGNNGAGSHQQQRSMVPWVRRATRFPN", "length": 281, "header": "tr|F4JN76-1|F4JN76_ARATH Computationally mapped isoform of Ribosome maturation factor OS=Arabidopsis thaliana OX=3702 GN=UIEF1 PE=1 SV=1 CANONICAL=Q9SN57-1" }, "locus": { "chromosome": "4", "start_pos": 6719718, "end_pos": 6721831, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT4G10970.6", "url": "https://www.ensemblgenomes.org/id/AT4G10970.6" }, { "database": "Ensembl Peptide", "id": "AT4G10970.6", "url": "https://www.ensemblgenomes.org/id/AT4G10970.6" } ] } }, { "isoform_ac": "Q9SN57-1", "url": "https://www.uniprot.org/uniprotkb/Q9SN57/entry", "sequence": { "sequence": "MATEKPITTETVALTEKKMDMSLDEIIKMEKSNTNVNKGKKQRVLNKKEKFSGAAKNSAVKAQRYMDSRSDVRQGAFAKKRSNFQGNQFPVTTTVARKAASATPRGRPYNGGRMTNTNQSRFIAPPAQNRASQRGFVGKQQQQQREKIVQQQANGGGGGQRQWPQTLDSRFANMKEERMRMRRFADNRSNVGNNGAGSHQQQRSMVPWVRRATRFPN", "length": 217, "header": "tr|Q9SN57-1|Q9SN57_ARATH Isoform 1 of Ribosome maturation factor OS=Arabidopsis thaliana OX=3702 GN=UIEF1 PE=1 SV=1 CANONICAL=Q9SN57-1" }, "locus": { "chromosome": "4", "start_pos": 6719438, "end_pos": 6722345, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT4G10970.1", "url": "https://www.ensemblgenomes.org/id/AT4G10970.1" }, { "database": "Ensembl Peptide", "id": "AT4G10970.1", "url": "https://www.ensemblgenomes.org/id/AT4G10970.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "1999", "authors": "Mayer K, Sch\u00fcller C, Wambutt R, Murphy G, Volckaert G, Pohl T, D\u00fcsterh\u00f6ft A, Stiekema W, Entian K D, Terryn N, Harris B, Ansorge W, Brandt P, Grivell L, Rieger M, Weichselgartner M, de Simone V, Obermaier B, Mache R, M\u00fcller M, Kreis M, Delseny M, Puigdomenech P, Watson M, Schmidtheini T, Reichert B, Portatelle D, Perez-Alonso M, Boutry M, Bancroft I, Vos P, Hoheisel J, Zimmermann W, Wedler H, Ridley P, Langham S A, McCullagh B, Bilham L, Robben J, Van der Schueren J, Grymonprez B, Chuang Y J, Vandenbussche F, Braeken M, Weltjens I, Voet M, Bastiaens I, Aert R, Defoor E, Weitzenegger T, Bothe G, Ramsperger U, Hilbert H, Braun M, Holzer E, Brandt A, Peters S, van Staveren M, Dirske W, Mooijman P, Klein Lankhorst R, Rose M, Hauf J, K\u00f6tter P, Berneiser S, Hempel S, Feldpausch M, Lamberth S, Van den Daele H, De Keyser A, Buysshaert C, Gielen J, Villarroel R, De Clercq R, Van Montagu M, Rogers J, Cronin A, Quail M, Bray-Allen S, Clark L, Doggett J, Hall S, Kay M, Lennard N, McLay K, Mayes R, Pettett A, Rajandream M A, Lyne M, Benes V, Rechmann S, Borkova D, Bl\u00f6cker H, Scharfe M, Grimm M, L\u00f6hnert T H, Dose S, de Haan M, Maarse A, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Fartmann B, Granderath K, Dauner D, Herzl A, Neumann S, Argiriou A, Vitale D, Liguori R, Piravandi E, Massenet O, Quigley F, Clabauld G, M\u00fcndlein A, Felber R, Schnabl S, Hiller R, Schmidt W, Lecharny A, Aubourg S, Chefdor F, Cooke R, Berger C, Montfort A, Casacuberta E, Gibbons T, Weber N, Vandenbol M, Bargues M, Terol J, Torres A, Perez-Perez A, Purnelle B, Bent E, Johnson S, Tacon D, Jesse T, Heijnen L, Schwarz S, Scholler P, Heber S, Francs P, Bielke C, Frishman D, Haase D, Lemcke K, Mewes H W, Stocker S, Zaccaria P, Bevan M, Wilson R K, de la Bastide M, Habermann K, Parnell L, Dedhia N, Gnoj L, Schutz K, Huang E, Spiegel L, Sehkon M, Murray J, Sheet P, Cordes M, Abu-Threideh J, Stoneking T, Kalicki J, Graves T, Harmon G, Edwards J, Latreille P, Courtney L, Cloud J, Abbott A, Scott K, Johnson D, Minx P, Bentley D, Fulton B, Miller N, Greco T, Kemp K, Kramer J, Fulton L, Mardis E, Dante M, Pepin K, Hillier L, Nelson J, Spieth J, Ryan E, Andrews S, Geisel C, Layman D, Du H, Ali J, Berghoff A, Jones K, Drone K, Cotton M, Joshu C, Antonoiu B, Zidanic M, Strong C, Sun H, Lamar B, Yordan C, Ma P, Zhong J, Preston R, Vil D, Shekher M, Matero A, Shah R, Swaby I K, O'Shaughnessy A, Rodriguez M, Hoffmann J, Till S, Granat S, Shohdy N, Hasegawa A, Hameed A, Lodhi M, Johnson A, Chen E, Marra M, Martienssen R, McCombie W R", "evidence": [ { "database": "UniProtKB", "id": "Q9SN57", "url": "https://www.uniprot.org/uniprotkb/Q9SN57" } ], "reference": [ { "type": "PubMed", "id": "10617198", "url": "https://glygen.org/publication/PubMed/10617198" } ] }, { "title": "Comparative large-scale characterisation of plant vs. mammal proteins reveals similar and idiosyncratic N-alpha acetylation features.", "journal": "Mol. Cell. Proteomics", "date": "2012", "authors": "Bienvenut WV, Sumpton D, Martinez A, Lilla S, Espagne C, Meinnel T, Giglione C", "evidence": [ { "database": "UniProtKB", "id": "Q9SN57", "url": "https://www.uniprot.org/uniprotkb/Q9SN57" } ], "reference": [ { "type": "PubMed", "id": "22223895", "url": "https://glygen.org/publication/PubMed/22223895" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9SN57", "url": "https://www.uniprot.org/uniprotkb/Q9SN57" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT4G10970", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT4G10970", "resource": "KEGG Pathway" } ], "orthologs": 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"length": 136, "header": "tr|Q9SN61-1|Q9SN61_ARATH Isoform 1 of Uncharacterized protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9SN61-1" }, "locus": { "chromosome": "4", "start_pos": 6696712, "end_pos": 6697455, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT4G10910.1", "url": "https://www.ensemblgenomes.org/id/AT4G10910.1" }, { "database": "Ensembl Peptide", "id": "AT4G10910.1", "url": "https://www.ensemblgenomes.org/id/AT4G10910.1" } ] } } ], "glycosylation": [], "phosphorylation": [ { "start_pos": 116, "end_pos": 116, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SN61", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SN61" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" } ], "site_lbl": "Ser116" }, { "start_pos": 120, "end_pos": 120, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SN61", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SN61" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" } ], "site_lbl": "Ser120" } ], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "1999", "authors": "Mayer K, Sch\u00fcller C, Wambutt R, Murphy G, Volckaert G, Pohl T, D\u00fcsterh\u00f6ft A, Stiekema W, Entian K D, Terryn N, Harris B, Ansorge W, Brandt P, Grivell L, Rieger M, Weichselgartner M, de Simone V, Obermaier B, Mache R, M\u00fcller M, Kreis M, Delseny M, Puigdomenech P, Watson M, Schmidtheini T, Reichert B, Portatelle D, Perez-Alonso M, Boutry M, Bancroft I, Vos P, Hoheisel J, Zimmermann W, Wedler H, Ridley P, Langham S A, McCullagh B, Bilham L, Robben J, Van der Schueren J, Grymonprez B, Chuang Y J, Vandenbussche F, Braeken M, Weltjens I, Voet M, Bastiaens I, Aert R, Defoor E, Weitzenegger T, Bothe G, Ramsperger U, Hilbert H, Braun M, Holzer E, Brandt A, Peters S, van Staveren M, Dirske W, Mooijman P, Klein Lankhorst R, Rose M, Hauf J, K\u00f6tter P, Berneiser S, Hempel S, Feldpausch M, Lamberth S, Van den Daele H, De Keyser A, Buysshaert C, Gielen J, Villarroel R, De Clercq R, Van Montagu M, Rogers J, Cronin A, Quail M, Bray-Allen S, Clark L, Doggett J, Hall S, Kay M, Lennard N, McLay K, Mayes R, Pettett A, Rajandream M A, Lyne M, Benes V, Rechmann S, Borkova D, Bl\u00f6cker H, Scharfe M, Grimm M, L\u00f6hnert T H, Dose S, de Haan M, Maarse A, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Fartmann B, Granderath K, Dauner D, Herzl A, Neumann S, Argiriou A, Vitale D, Liguori R, Piravandi E, Massenet O, Quigley F, Clabauld G, M\u00fcndlein A, Felber R, Schnabl S, Hiller R, Schmidt W, Lecharny A, Aubourg S, Chefdor F, Cooke R, Berger C, Montfort A, 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A, Hameed A, Lodhi M, Johnson A, Chen E, Marra M, Martienssen R, McCombie W R", "evidence": [ { "database": "UniProtKB", "id": "Q9SN61", "url": "https://www.uniprot.org/uniprotkb/Q9SN61" } ], "reference": [ { "type": "PubMed", "id": "10617198", "url": "https://glygen.org/publication/PubMed/10617198" } ] }, { "title": "A large-scale protein phosphorylation analysis reveals novel phosphorylation motifs and phosphoregulatory networks in Arabidopsis.", "journal": "Journal of proteomics", "date": "2013-01-14", "authors": "Wang Xu, Bian Yangyang, Cheng Kai, Gu Li-Fei, Ye Mingliang, Zou Hanfa, Sun Samuel Sai-Ming, He Jun-Xian", "evidence": [ { "database": "iPTMnet", "id": "Q9SN61", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SN61" } ], "reference": [ { "type": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": 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"ath:AT4G10810", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT4G10810", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "TSHEMNA", "url": "https://omabrowser.org/oma/group/TSHEMNA/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR34061", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR34061", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR34061:SF11", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR34061:SF11", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "AT4G10810", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT4G10810", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9SN67", "url": "https://www.uniprot.org/uniprotkb/Q9SN67", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9SN67-1", "url": "https://www.uniprot.org/uniprotkb/Q9SN67-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MDNSSSINSTASTASNLSTASLEKLDQAASWVSTTVISAFFASLERCSCVNLSTSDDDDEGEESHNRPLALSAAPHPDDIV", "length": 81, "header": "tr|Q9SN67-1|Q9SN67_ARATH Isoform 1 of Uncharacterized protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SN67-1" }, "isoforms": [ { "isoform_ac": "Q9SN67-1", "url": "https://www.uniprot.org/uniprotkb/Q9SN67/entry", "sequence": { "sequence": "MDNSSSINSTASTASNLSTASLEKLDQAASWVSTTVISAFFASLERCSCVNLSTSDDDDEGEESHNRPLALSAAPHPDDIV", "length": 81, "header": "tr|Q9SN67-1|Q9SN67_ARATH Isoform 1 of Uncharacterized protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SN67-1" }, "locus": { "chromosome": "4", "start_pos": 6645553, "end_pos": 6646400, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT4G10810.1", "url": "https://www.ensemblgenomes.org/id/AT4G10810.1" }, { "database": "Ensembl Peptide", "id": 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Staveren M, Dirske W, Mooijman P, Klein Lankhorst R, Rose M, Hauf J, K\u00f6tter P, Berneiser S, Hempel S, Feldpausch M, Lamberth S, Van den Daele H, De Keyser A, Buysshaert C, Gielen J, Villarroel R, De Clercq R, Van Montagu M, Rogers J, Cronin A, Quail M, Bray-Allen S, Clark L, Doggett J, Hall S, Kay M, Lennard N, McLay K, Mayes R, Pettett A, Rajandream M A, Lyne M, Benes V, Rechmann S, Borkova D, Bl\u00f6cker H, Scharfe M, Grimm M, L\u00f6hnert T H, Dose S, de Haan M, Maarse A, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Fartmann B, Granderath K, Dauner D, Herzl A, Neumann S, Argiriou A, Vitale D, Liguori R, Piravandi E, Massenet O, Quigley F, Clabauld G, M\u00fcndlein A, Felber R, Schnabl S, Hiller R, Schmidt W, Lecharny A, Aubourg S, Chefdor F, Cooke R, Berger C, Montfort A, Casacuberta E, Gibbons T, Weber N, Vandenbol M, Bargues M, Terol J, Torres A, Perez-Perez A, Purnelle B, Bent E, Johnson S, Tacon D, Jesse T, Heijnen L, Schwarz S, Scholler P, Heber S, Francs P, 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"000000000000000000000.xxxxxxx.00000001000000.xxxxxxx.xxxxxxxxxx.xxxxxxxxxxxxxxxxxx.xxxxx.01000" } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_reported_with_glycan" ], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, 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"categories": [ "Enzyme and Pathway" ] }, { "id": "WAPAGNM", "url": "https://omabrowser.org/oma/group/WAPAGNM/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR42886", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR42886", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR42886:SF53", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR42886:SF53", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF12146", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF12146", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_190343", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_190343", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G47590", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G47590", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": 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PE=1 SV=1 CANONICAL=Q9SN79-1" }, "isoforms": [ { "isoform_ac": "A0A1I9LST7-1", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LST7/entry", "sequence": { "sequence": "MRTLLHNFNFVPQDSPYYKTSPFPTSSFFNVRFPIKNNQISCNKAKNLRMDPSKGIQEQRIVIPNRHNEKLVGLLHETGSTDIVVLCHGFRSNKSNQIMNNVAAAIQKEGISAFRFDFSGNGESEGSFYYGNYNHEADDLHSVVQYFSNKNRVVPIILGHSKGGDVVLLYASKYHDVRNVINLSGRYDLKKGIRERLGEDFLERIKQQGFIDVGDGIVISFWFSCDVFD", "length": 229, "header": "tr|A0A1I9LST7-1|A0A1I9LST7_ARATH Computationally mapped isoform of Alpha/beta-Hydrolases superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SN79-1" }, "locus": { "chromosome": "3", "start_pos": 17536525, "end_pos": 17537546, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G47590.2", "url": "https://www.ensemblgenomes.org/id/AT3G47590.2" }, { "database": "Ensembl Peptide", "id": "AT3G47590.2", "url": "https://www.ensemblgenomes.org/id/AT3G47590.2" } ] } }, { "isoform_ac": "Q9SN79-1", "url": 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Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9SN99", "url": "https://www.uniprot.org/uniprotkb/Q9SN99" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Quantitative Circadian Phosphoproteomic Analysis of Arabidopsis Reveals Extensive Clock Control of Key Components in Physiological, Metabolic, and Signaling Pathways.", "journal": "Molecular & cellular proteomics : MCP", "date": "2015-08", "authors": "Choudhary Mani Kant, Nomura Yuko, Wang Lei, Nakagami Hirofumi, Somers David E", "evidence": [ { "database": "iPTMnet", "id": "Q9SN99", "url": 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"monoisotopic_mass": 44303.0 }, "refseq": { "ac": "NP_190603", "name": "uncharacterized protein", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_190603" }, "gene_names": [], "protein_names": [ { "name": "Knr4/Smi1-like domain-containing protein", "type": "recommended", "evidence": [ { "id": "Q9SND3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SND3/entry#names_and_taxonomy" } ] }, { "name": "uncharacterized protein", "type": "synonym", "evidence": [ { "id": "NP_190603", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_190603" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9SND3", "url": "https://www.uniprot.org/uniprotkb/Q9SND3" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9SND3", "locus": {} } ], "crossref": [ { "id": "824196", "url": "https://www.ncbi.nlm.nih.gov/gene/824196", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "ath:AT3G50340", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G50340", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "FEGEMVM", "url": "https://omabrowser.org/oma/group/FEGEMVM/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "Q9SND3", "url": "https://www.orthodb.org/?gene=Q9SND3", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR32011", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR32011", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR32011:SF2", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR32011:SF2", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "NP_190603", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_190603", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G50340", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G50340", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9SND3", "url": "https://www.uniprot.org/uniprotkb/Q9SND3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9SND3-1", "url": "https://www.uniprot.org/uniprotkb/Q9SND3-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MVDVDRRMTGLRPAHAAGLRRLSARAAAPTTPTVRNSLVSFSSLADQVISHLHTSRIQVQPGLTDSEFARAEAEFAFAFPPDLRAVLTAGLPVGAGFPDWRSPGARLHLRAMIDLPIAAVSFQIARNTLWSKSWGLRPSDPEKALRVARNALKRAPLMIPIFDHCYIPCNPSLAGNPVFYIDETRIFCCGSDLSDFFERESVFRGSDTCPVVLTKQRSVSEKSAGSSSSSSSNFSRMSLDSGRVHGSSTPRWVEFWSDAAVDRRRRNSASSMSSSHSSSPERYLDLPRSETPKWVDDYVNRIGSVLRGGGWSESDVDDIVHVSASGFFEGEMVILDNQAVLDALLLKAGRFSESLRKAGWSSEEVSDALGFDFRPEKEKKPVKKLSPELVQRIGKLAESVSRS", "length": 403, "header": "tr|Q9SND3-1|Q9SND3_ARATH Isoform 1 of Knr4/Smi1-like domain-containing protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SND3-1" }, "isoforms": [ { "isoform_ac": "Q9SND3-1", "url": "https://www.uniprot.org/uniprotkb/Q9SND3/entry", "sequence": { "sequence": "MVDVDRRMTGLRPAHAAGLRRLSARAAAPTTPTVRNSLVSFSSLADQVISHLHTSRIQVQPGLTDSEFARAEAEFAFAFPPDLRAVLTAGLPVGAGFPDWRSPGARLHLRAMIDLPIAAVSFQIARNTLWSKSWGLRPSDPEKALRVARNALKRAPLMIPIFDHCYIPCNPSLAGNPVFYIDETRIFCCGSDLSDFFERESVFRGSDTCPVVLTKQRSVSEKSAGSSSSSSSNFSRMSLDSGRVHGSSTPRWVEFWSDAAVDRRRRNSASSMSSSHSSSPERYLDLPRSETPKWVDDYVNRIGSVLRGGGWSESDVDDIVHVSASGFFEGEMVILDNQAVLDALLLKAGRFSESLRKAGWSSEEVSDALGFDFRPEKEKKPVKKLSPELVQRIGKLAESVSRS", "length": 403, "header": "tr|Q9SND3-1|Q9SND3_ARATH Isoform 1 of Knr4/Smi1-like domain-containing protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SND3-1" }, "locus": { "chromosome": "3", "start_pos": 18664838, "end_pos": 18666691, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G50340.1", "url": "https://www.ensemblgenomes.org/id/AT3G50340.1" }, { "database": "Ensembl Peptide", "id": "AT3G50340.1", "url": "https://www.ensemblgenomes.org/id/AT3G50340.1" } ] } } ], "glycosylation": [], "phosphorylation": [ { "start_pos": 230, "end_pos": 230, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SND3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SND3" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" } ], "site_lbl": "Ser230" } ], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9SND3", "url": "https://www.uniprot.org/uniprotkb/Q9SND3" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Genetics and phosphoproteomics reveal a protein phosphorylation network in the abscisic acid signaling pathway in Arabidopsis thaliana.", "journal": "Science signaling", "date": "2013-04-09", "authors": "Umezawa Taishi, Sugiyama Naoyuki, Takahashi Fuminori, Anderson Jeffrey C, Ishihama Yasushi, Peck Scott C, Shinozaki Kazuo", "evidence": [ { "database": "iPTMnet", "id": "Q9SND3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SND3" } ], "reference": [ { "type": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9SND3", "url": "https://www.uniprot.org/uniprotkb/Q9SND3" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G50340", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G50340", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q9SND3", "url": "https://www.uniprot.org/uniprotkb/Q9SND3" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 233, "end_pos": 235, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [ 230 ], "sequon_annotation_sites": [ { "start_pos": 233, "end_pos": 235 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 } ], "sort_fields": [ "start_pos", "end_pos", "kinase_uniprot_canonical_ac", "kinase_gene_name", "residue", "comment", "site_lbl" ] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 3 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "Q9SND9-1", "uniprot_ac": "Q9SND9", "uniprot_id": "Y3028_ARATH", "mass": { "chemical_mass": 49960.0, "monoisotopic_mass": 49960.0 }, "refseq": { "ac": "NP_190597", "name": "HXXXD-type acyl-transferase family protein", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_190597" }, "gene_names": [ { "name": "F11C1.120", "type": "synonym", "evidence": [ { "id": "Q9SND9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SND9" } ] } ], "protein_names": [ { "name": "Uncharacterized acetyltransferase At3g50280", "type": "recommended", "evidence": [ { "id": "Q9SND9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SND9/entry#names_and_taxonomy" } ] }, { "name": "2.3.1.-", "type": "synonym", "evidence": [ { "id": "Q9SND9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SND9/entry#names_and_taxonomy" } ] }, { "name": "HXXXD-type acyl-transferase family protein", "type": "synonym", "evidence": [ { "id": "NP_190597", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_190597" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9SND9", "url": "https://www.uniprot.org/uniprotkb/Q9SND9" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9SND9", "locus": {} } ], "crossref": [ { "id": "Q9SND9", "url": "https://alphafold.ebi.ac.uk/entry/Q9SND9", "database": "AlphaFoldDB", "categories": [] }, { "id": "AT3G50280", "url": "https://bar.utoronto.ca/thalemine/portal.do?externalids=AT3G50280", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "824190", "url": "https://www.ncbi.nlm.nih.gov/gene/824190", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR023213", "url": "https://www.ebi.ac.uk/interpro/entry/IPR023213", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR051283", "url": "https://www.ebi.ac.uk/interpro/entry/IPR051283", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT3G50280", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G50280", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "DFMSHFF", "url": "https://omabrowser.org/oma/group/DFMSHFF/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR31896", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31896", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR31896:SF31", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31896:SF31", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF02458", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF02458", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PR:Q9SND9", "url": "https://proconsortium.org/cgi-bin/entry_pro?id=PR:Q9SND9", "database": "PRO", "categories": [ "Protein" ] }, { "id": "NP_190597", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_190597", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G50280", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G50280", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "A0A1I9LM25", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LM25", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A1I9LM25-1", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LM25-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9SND9", "url": "https://www.uniprot.org/uniprotkb/Q9SND9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9SND9-1", "url": "https://www.uniprot.org/uniprotkb/Q9SND9-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MADVTFISSSIVRPQIINQEGREKIHLTPFDLNLLYVDYTQRGLLFPKPDPETHFISRLRTSLSSALDIYFPFAGRLNKVENHEDETVSFYINCDGSGAKFIHAVSDSVSVSDLLRPDGSVPDFFRIFYPMNGVKSIDGLSEPLLALQVTEMRDGVFIGFGYNHMVADGASIWNFFRTWSKICSNGQRENLQPLALKGLFVDGMDFPIHIPVSDTETSPPSRELSPTFKERVFHFTKRNISDLKAKVNGEIGLRDHKVSSLQAVSAHMWRSIIRHSGLNQEEKTRCFVAVDLRQRLNPPLDKECFGHVIYNSVVTTTVGELHDQGLGWAFLQINNMLRSLTNEDYRIYAENWVRNMKIQKSGLGSKMTRDSVIVSSSPRFEVYDNDFGWGKPIAVRAGPSNSISGKLVFFRGIEEGCIDVHAFLLPDVLVKLLADVEFLEKCG", "length": 443, "header": "sp|Q9SND9-1|Y3028_ARATH Isoform 1 of Uncharacterized acetyltransferase At3g50280 OS=Arabidopsis thaliana OX=3702 GN= PE=3 SV=1 CANONICAL=Q9SND9-1" }, "isoforms": [ { "isoform_ac": "A0A1I9LM25-1", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LM25/entry", "sequence": { "sequence": "MNGVKSIDGLSEPLLALQVTEMRDGVFIGFGYNHMVADGASIWNFFRTWSKICSNGQRENLQPLALKGLFVDGMDFPIHIPVSDTETSPPSRELSPTFKERVFHFTKRNISDLKAKVNGEIGLRDHKVSSLQAVSAHMWRSIIRHSGLNQEEKTRCFVAVDLRQRLNPPLDKECFGHVIYNSVVTTTVGELHDQGLGWAFLQINNMLRSLTNEDYRIYAENWVRNMKIQKSGLGSKMTRDSVIVSSSPRFEVYDNDFGWGKPIAVRAGPSNSISGKLVFFRGIEEGCIDVHAFLLPDVLVKLLADVEFLEKCG", "length": 313, "header": "tr|A0A1I9LM25-1|A0A1I9LM25_ARATH Computationally mapped isoform of HXXXD-type acyl-transferase family protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SND9-1" }, "locus": { "chromosome": "3", "start_pos": 18637751, "end_pos": 18639413, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G50280.2", "url": "https://www.ensemblgenomes.org/id/AT3G50280.2" }, { "database": "Ensembl Peptide", "id": "AT3G50280.2", "url": "https://www.ensemblgenomes.org/id/AT3G50280.2" } ] } }, { "isoform_ac": "Q9SND9-1", "url": "https://www.uniprot.org/uniprotkb/Q9SND9/entry#Q9SND9-1", "sequence": { "sequence": "MADVTFISSSIVRPQIINQEGREKIHLTPFDLNLLYVDYTQRGLLFPKPDPETHFISRLRTSLSSALDIYFPFAGRLNKVENHEDETVSFYINCDGSGAKFIHAVSDSVSVSDLLRPDGSVPDFFRIFYPMNGVKSIDGLSEPLLALQVTEMRDGVFIGFGYNHMVADGASIWNFFRTWSKICSNGQRENLQPLALKGLFVDGMDFPIHIPVSDTETSPPSRELSPTFKERVFHFTKRNISDLKAKVNGEIGLRDHKVSSLQAVSAHMWRSIIRHSGLNQEEKTRCFVAVDLRQRLNPPLDKECFGHVIYNSVVTTTVGELHDQGLGWAFLQINNMLRSLTNEDYRIYAENWVRNMKIQKSGLGSKMTRDSVIVSSSPRFEVYDNDFGWGKPIAVRAGPSNSISGKLVFFRGIEEGCIDVHAFLLPDVLVKLLADVEFLEKCG", "length": 443, "header": "sp|Q9SND9-1|Y3028_ARATH Isoform 1 of Uncharacterized acetyltransferase At3g50280 OS=Arabidopsis thaliana OX=3702 GN= PE=3 SV=1 CANONICAL=Q9SND9-1" }, "locus": { "chromosome": "3", "start_pos": 18637735, "end_pos": 18639475, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G50280.1", "url": "https://www.ensemblgenomes.org/id/AT3G50280.1" }, { "database": "Ensembl Peptide", "id": "AT3G50280.1", "url": "https://www.ensemblgenomes.org/id/AT3G50280.1" } ] } } ], "glycosylation": [], "phosphorylation": [ { "start_pos": 225, "end_pos": 225, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SND9", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SND9" }, { "database": "PubMed", "id": "17586839", "url": "https://glygen.org/publication/PubMed/17586839" } ], "site_lbl": "Ser225" } ], "glycation": [], "keywords": [ "enzyme" ], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9SND9", "url": "https://www.uniprot.org/uniprotkb/Q9SND9" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Temporal analysis of sucrose-induced phosphorylation changes in plasma membrane proteins of Arabidopsis.", "journal": "Molecular & cellular proteomics : MCP", "date": "2007-10", "authors": "Niittyl\u00e4 Totte, Fuglsang Anja T, Palmgren Michael G, Frommer Wolf B, Schulze Waltraud X", "evidence": [ { "database": "iPTMnet", "id": "Q9SND9", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SND9" } ], "reference": [ { "type": "PubMed", "id": "17586839", "url": "https://glygen.org/publication/PubMed/17586839" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9SND9", "url": "https://www.uniprot.org/uniprotkb/Q9SND9" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G50280", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G50280", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "Q9SND9", "url": "https://www.uniprot.org/uniprotkb/Q9SND9" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "acyltransferase activity, transferring groups other than amino-acyl groups", "id": "GO:0016747", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016747", "evidence": [ { "database": "UniProtKB", "id": "Q9SND9", "url": "https://www.uniprot.org/uniprotkb/Q9SND9" } ], "pmid": "" }, { "name": "transferase activity", "id": "GO:0016740", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016740", "evidence": [ { "database": "UniProtKB", "id": "Q9SND9", "url": "https://www.uniprot.org/uniprotkb/Q9SND9" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 239, "end_pos": 241, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-Q9SND9-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 443, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-Q9SND9-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/Q9SND9" } ], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [ 225 ], "sequon_annotation_sites": [ { "start_pos": 239, "end_pos": 241 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 } ], "sort_fields": [ "start_pos", "end_pos", "kinase_uniprot_canonical_ac", "kinase_gene_name", "residue", "comment", "site_lbl" ] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 3 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "Q9SNE0-1", "uniprot_ac": "Q9SNE0", "uniprot_id": "Q9SNE0_ARATH", "mass": { "chemical_mass": 49806.0, "monoisotopic_mass": 49806.0 }, "refseq": { "ac": "NP_190596", "name": "HXXXD-type acyl-transferase family protein", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_190596" }, "gene_names": [], "protein_names": [ { "name": "HXXXD-type acyl-transferase family protein", "type": "synonym", "evidence": [ { "id": "NP_190596", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_190596" }, { "id": "Q9SNE0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SNE0/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9SNE0", "url": "https://www.uniprot.org/uniprotkb/Q9SNE0" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9SNE0", "locus": {} } ], "crossref": [ { "id": "824189", "url": "https://www.ncbi.nlm.nih.gov/gene/824189", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR023213", "url": "https://www.ebi.ac.uk/interpro/entry/IPR023213", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR051283", "url": "https://www.ebi.ac.uk/interpro/entry/IPR051283", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT3G50270", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G50270", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "WFLEGID", "url": "https://omabrowser.org/oma/group/WFLEGID/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR31896", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31896", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR31896:SF42", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31896:SF42", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF02458", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF02458", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_190596", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_190596", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G50270", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G50270", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9SNE0", "url": "https://www.uniprot.org/uniprotkb/Q9SNE0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9SNE0-1", "url": "https://www.uniprot.org/uniprotkb/Q9SNE0-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MAGGGVVLVSSSIVRPVNSSQSGRTKIHLTPFDLSLLQFDYPQRGLLFSKPDSDFHLIISRLKDSLSLALEIYFPFAGRLVKTENLEDDTVSFFIDCDGSGARFLHTEAKSVSVSDILQPDGSVPDFLKYFFPADDFKSCDGVSLPLLVIQVTEMKDGVFISFCYNHMVADGVSMWSFFDTWSKICSTGSCFNYKPLVLKGWFLEGIDYPIHVPVSEAERSPPSREPSSVPITKEWIFHFTKKNISDLKAKANSEIASSSDLEVSSLQAVSAHMWRSIIRHSGVSREQKTHCRLVVDLRQRVNPPLEKDCFGNMVYLSSAITTVEELLDRGLGEAALQIRKLVSSQTNETCKSFAEDWVRNIKNLNSGIGSKVGNTIVIASSPRFEVYNKDFGWGKPIAIRAGPSNSINGKLSVFQGISEGSIDVQAILWGDVIVKLLADLEFLEHVTIA", "length": 450, "header": "tr|Q9SNE0-1|Q9SNE0_ARATH Isoform 1 of HXXXD-type acyl-transferase family protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SNE0-1" }, "isoforms": [ { "isoform_ac": "Q9SNE0-1", "url": "https://www.uniprot.org/uniprotkb/Q9SNE0/entry", "sequence": { "sequence": "MAGGGVVLVSSSIVRPVNSSQSGRTKIHLTPFDLSLLQFDYPQRGLLFSKPDSDFHLIISRLKDSLSLALEIYFPFAGRLVKTENLEDDTVSFFIDCDGSGARFLHTEAKSVSVSDILQPDGSVPDFLKYFFPADDFKSCDGVSLPLLVIQVTEMKDGVFISFCYNHMVADGVSMWSFFDTWSKICSTGSCFNYKPLVLKGWFLEGIDYPIHVPVSEAERSPPSREPSSVPITKEWIFHFTKKNISDLKAKANSEIASSSDLEVSSLQAVSAHMWRSIIRHSGVSREQKTHCRLVVDLRQRVNPPLEKDCFGNMVYLSSAITTVEELLDRGLGEAALQIRKLVSSQTNETCKSFAEDWVRNIKNLNSGIGSKVGNTIVIASSPRFEVYNKDFGWGKPIAIRAGPSNSINGKLSVFQGISEGSIDVQAILWGDVIVKLLADLEFLEHVTIA", "length": 450, "header": "tr|Q9SNE0-1|Q9SNE0_ARATH Isoform 1 of HXXXD-type acyl-transferase family protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SNE0-1" }, "locus": { "chromosome": "3", "start_pos": 18635758, "end_pos": 18637468, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G50270.1", "url": "https://www.ensemblgenomes.org/id/AT3G50270.1" }, { "database": "Ensembl Peptide", "id": "AT3G50270.1", "url": "https://www.ensemblgenomes.org/id/AT3G50270.1" } ] } } ], "glycosylation": [], "phosphorylation": [ { "start_pos": 376, "end_pos": 376, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Thr", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SNE0", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SNE0" } ], "site_lbl": "Thr376" } ], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo 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Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9SNE0", "url": "https://www.uniprot.org/uniprotkb/Q9SNE0" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9SNE0", "url": "https://www.uniprot.org/uniprotkb/Q9SNE0" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G50270", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G50270", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular 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"MDLVNVHSNDQPILINKDMFTNNQLSEPVKDQNLHGLAEILTLQRCGGTEEITRPGQDQDYKSQEQTCSVFCEIEVIGERSEETTGDSWLISLRDKLDQAHRDDDTTIWGELCMETLTEVDQPKLMNGQEKSLDILDDKGKLHCLDVFRQSLLQSNPTPNQRSRLMRLTKNTYVVDKRLQQLVNCVTELRGAGVKFRRRNTDRFWDIQFKNGYLEIPKLLIHDGGMFLRES", "length": 231, "header": "tr|Q9SNE7-1|Q9SNE7_ARATH Isoform 1 of Uncharacterized protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9SNE7-1" }, "isoforms": [ { "isoform_ac": "Q9SNE7-1", "url": "https://www.uniprot.org/uniprotkb/Q9SNE7/entry", "sequence": { "sequence": "MDLVNVHSNDQPILINKDMFTNNQLSEPVKDQNLHGLAEILTLQRCGGTEEITRPGQDQDYKSQEQTCSVFCEIEVIGERSEETTGDSWLISLRDKLDQAHRDDDTTIWGELCMETLTEVDQPKLMNGQEKSLDILDDKGKLHCLDVFRQSLLQSNPTPNQRSRLMRLTKNTYVVDKRLQQLVNCVTELRGAGVKFRRRNTDRFWDIQFKNGYLEIPKLLIHDGGMFLRES", "length": 231, "header": "tr|Q9SNE7-1|Q9SNE7_ARATH Isoform 1 of Uncharacterized protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9SNE7-1" }, "locus": { "chromosome": "3", "start_pos": 18612266, "end_pos": 18613435, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G50200.1", "url": "https://www.ensemblgenomes.org/id/AT3G50200.1" }, { "database": "Ensembl Peptide", "id": "AT3G50200.1", "url": "https://www.ensemblgenomes.org/id/AT3G50200.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, 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T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9SNE7", "url": "https://www.uniprot.org/uniprotkb/Q9SNE7" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9SNE7", "url": "https://www.uniprot.org/uniprotkb/Q9SNE7" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G50200", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G50200", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q9SNE7", "url": "https://www.uniprot.org/uniprotkb/Q9SNE7" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { 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"n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "Q9SNE9-1", "uniprot_ac": "Q9SNE9", "uniprot_id": "Q9SNE9_ARATH", "mass": { "chemical_mass": 67632.0, "monoisotopic_mass": 67632.0 }, "refseq": { "ac": "NP_190587", "name": "transmembrane protein, putative (DUF247)", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_190587" }, "gene_names": [], "protein_names": [ { "name": "Transmembrane protein, putative (DUF247)", "type": "synonym", "evidence": [ { "id": "Q9SNE9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SNE9/entry#names_and_taxonomy" } ] }, { "name": "transmembrane protein, putative (DUF247)", "type": "synonym", "evidence": [ { "id": "NP_190587", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_190587" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9SNE9", "url": "https://www.uniprot.org/uniprotkb/Q9SNE9" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9SNE9", "locus": {} } ], "crossref": [ { "id": "AT3G50180", "url": "https://bar.utoronto.ca/thalemine/portal.do?externalids=AT3G50180", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "824180", "url": "https://www.ncbi.nlm.nih.gov/gene/824180", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR004158", "url": "https://www.ebi.ac.uk/interpro/entry/IPR004158", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT3G50180", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G50180", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "ECHKWRA", "url": "https://omabrowser.org/oma/group/ECHKWRA/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR31170", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31170", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR31170:SF25", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31170:SF25", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF03140", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF03140", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_190587", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_190587", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G50180", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G50180", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9SNE9", "url": "https://www.uniprot.org/uniprotkb/Q9SNE9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9SNE9-1", "url": "https://www.uniprot.org/uniprotkb/Q9SNE9-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "METFGTIPPPPPLPPRLELRRQRAPPPQPPPPPPPPPPPPPPRLGPRLRLRLLPPPRQQLLRLRKQQPLVLPEPLPLRPRAIPWLTGHDVKKGKSYDKLREYVENVRRQNEESERVVLPKSISYEDQNLENQQDTRSKPGINEVVEGSGTKRLEWVISIKDKLEQAYRNDDRTSWGKLCIYKVPHYLHGNDKKSYFPQTVSLGPYHHGRQQTQSMECHKWRAVNMVLKRTNQGIEVFLDAMIELEEKARACYEGSIVLSSNEFTEMLLLDGCFILELLQGVNEGFLKLGYDHNDPVFAVRGSMHSIQRDMIMLENQLPLFVLNRLLELQPGTQNQTGLVELVVRFFIPLMPTAETLTENSPPRGVSNGELHCLDVFHRSLLFPRSSGKANYSRVADKHLQRVIPTVTELRDAGFKFKLNKTDRFWDIKFSNGYLEIPGLLIHDGTKSLFLNLIAFEQCHIESSNDITSYIIFMDNLIDSPEDISYLHHCGIIEHSLGSNSEVADMFNQLCQEVVFDTKDIYLSQLLIEVHRCYKQNYSRKLNSLKTTLILKYLDNPWAYLSFFAAVILLILTFSQSYFAAYAYFNPSS", "length": 588, "header": "tr|Q9SNE9-1|Q9SNE9_ARATH Isoform 1 of Transmembrane protein, putative (DUF247) OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9SNE9-1" }, "isoforms": [ { "isoform_ac": "Q9SNE9-1", "url": "https://www.uniprot.org/uniprotkb/Q9SNE9/entry", "sequence": { "sequence": "METFGTIPPPPPLPPRLELRRQRAPPPQPPPPPPPPPPPPPPRLGPRLRLRLLPPPRQQLLRLRKQQPLVLPEPLPLRPRAIPWLTGHDVKKGKSYDKLREYVENVRRQNEESERVVLPKSISYEDQNLENQQDTRSKPGINEVVEGSGTKRLEWVISIKDKLEQAYRNDDRTSWGKLCIYKVPHYLHGNDKKSYFPQTVSLGPYHHGRQQTQSMECHKWRAVNMVLKRTNQGIEVFLDAMIELEEKARACYEGSIVLSSNEFTEMLLLDGCFILELLQGVNEGFLKLGYDHNDPVFAVRGSMHSIQRDMIMLENQLPLFVLNRLLELQPGTQNQTGLVELVVRFFIPLMPTAETLTENSPPRGVSNGELHCLDVFHRSLLFPRSSGKANYSRVADKHLQRVIPTVTELRDAGFKFKLNKTDRFWDIKFSNGYLEIPGLLIHDGTKSLFLNLIAFEQCHIESSNDITSYIIFMDNLIDSPEDISYLHHCGIIEHSLGSNSEVADMFNQLCQEVVFDTKDIYLSQLLIEVHRCYKQNYSRKLNSLKTTLILKYLDNPWAYLSFFAAVILLILTFSQSYFAAYAYFNPSS", "length": 588, "header": "tr|Q9SNE9-1|Q9SNE9_ARATH Isoform 1 of Transmembrane protein, putative (DUF247) OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9SNE9-1" }, "locus": { "chromosome": "3", "start_pos": 18604941, "end_pos": 18607162, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G50180.1", "url": "https://www.ensemblgenomes.org/id/AT3G50180.1" }, { "database": "Ensembl Peptide", "id": "AT3G50180.1", "url": "https://www.ensemblgenomes.org/id/AT3G50180.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, 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"https://www.uniprot.org/uniprotkb/Q9SNE9" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9SNE9", "url": "https://www.uniprot.org/uniprotkb/Q9SNE9" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G50180", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G50180", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": 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physiology", "date": "2010-07", "authors": "Nakagami Hirofumi, Sugiyama Naoyuki, Mochida Keiichi, Daudi Arsalan, Yoshida Yuko, Toyoda Tetsuro, Tomita Masaru, Ishihama Yasushi, Shirasu Ken", "evidence": [ { "database": "iPTMnet", "id": "Q9SQT7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SQT7" } ], "reference": [ { "type": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" } ] }, { "title": "Nitrate and ammonium lead to distinct global dynamic phosphorylation patterns when resupplied to nitrogen-starved Arabidopsis seedlings.", "journal": "The Plant journal : for cell and molecular biology", "date": "2012-03", "authors": "Engelsberger Wolfgang R, Schulze Waltraud X", "evidence": [ { "database": "iPTMnet", "id": "Q9SQT7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SQT7" } ], "reference": [ { "type": "PubMed", "id": "22060019", "url": "https://glygen.org/publication/PubMed/22060019" } ] }, { "title": "Quantitative 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"id": "PTHR44042", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR44042", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR44042:SF41", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR44042:SF41", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "NP_187670", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_187670", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G10590", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G10590", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9SQY9", "url": "https://www.uniprot.org/uniprotkb/Q9SQY9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9SQY9-1", "url": "https://www.uniprot.org/uniprotkb/Q9SQY9-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MASSPRWTEDDNRRFKSALSQFPPDNKRLVNVAQHLPKPLEEVKYYYEKLVNDVYLPKPLENVTQHLQKPMEMEEMKYMYEKMANDVNQMPEYVPLAESSQSKRRKKDTPNPWTEEEHRLFLQGLKKYGEGASTLTSTNFVKTKTPRQVSSHAQYYKRQKSDNKKEKRRSIFDITLESTEGNPDSGNQNPPDDDDPSQGQGTCLGV", "length": 206, "header": "tr|Q9SQY9-1|Q9SQY9_ARATH Isoform 1 of Duplicated homeodomain-like superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SQY9-1" }, "isoforms": [ { "isoform_ac": "Q9SQY9-1", "url": "https://www.uniprot.org/uniprotkb/Q9SQY9/entry", "sequence": { "sequence": "MASSPRWTEDDNRRFKSALSQFPPDNKRLVNVAQHLPKPLEEVKYYYEKLVNDVYLPKPLENVTQHLQKPMEMEEMKYMYEKMANDVNQMPEYVPLAESSQSKRRKKDTPNPWTEEEHRLFLQGLKKYGEGASTLTSTNFVKTKTPRQVSSHAQYYKRQKSDNKKEKRRSIFDITLESTEGNPDSGNQNPPDDDDPSQGQGTCLGV", "length": 206, "header": "tr|Q9SQY9-1|Q9SQY9_ARATH Isoform 1 of Duplicated homeodomain-like superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SQY9-1" }, "locus": { "chromosome": "3", "start_pos": 3310208, "end_pos": 3311327, "strand": "+", 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B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9SQY9", "url": "https://www.uniprot.org/uniprotkb/Q9SQY9" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "A large-scale protein phosphorylation analysis reveals novel phosphorylation motifs and phosphoregulatory networks in Arabidopsis.", "journal": "Journal of proteomics", "date": "2013-01-14", "authors": "Wang Xu, Bian Yangyang, Cheng Kai, Gu Li-Fei, Ye Mingliang, Zou Hanfa, Sun Samuel Sai-Ming, He Jun-Xian", "evidence": [ { "database": "iPTMnet", "id": "Q9SQY9", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SQY9" } ], "reference": [ { "type": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9SQY9", "url": "https://www.uniprot.org/uniprotkb/Q9SQY9" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G10590", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G10590", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "DNA binding", "id": "GO:0003677", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003677", "evidence": [ { "database": "UniProtKB", "id": "Q9SQY9", "url": "https://www.uniprot.org/uniprotkb/Q9SQY9" } ], "pmid": "" }, { "name": "DNA-binding transcription factor activity", "id": "GO:0003700", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003700", "evidence": [ { "database": "UniProtKB", "id": "Q9SQY9", "url": "https://www.uniprot.org/uniprotkb/Q9SQY9" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": 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"total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "Q9SR09-1", "uniprot_ac": "Q9SR09", "uniprot_id": "Q9SR09_ARATH", "mass": { "chemical_mass": 52363.0, "monoisotopic_mass": 52363.0 }, "refseq": {}, "gene_names": [ { "name": "F7O18.13", "type": "synonym", "evidence": [ { "id": "Q9SR09", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SR09" } ] }, { "name": "F7O18_13", "type": "synonym", "evidence": [ { "id": "Q9SR09", "database": "UniProtKB", "url": 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"categories": [ "Protein Classification", "Other" ] }, { "id": "AT3G04650", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G04650", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9SR09", "url": "https://www.uniprot.org/uniprotkb/Q9SR09", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9SR09-1", "url": "https://www.uniprot.org/uniprotkb/Q9SR09-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MATSLMSLSSSFLQPLKLKTLAQPRNTDLSTTRKIITTCDSQNNTGKSNPSSRNPNFQKRRNSSKYGTSRRSILKKSFLQEQVTFTARVSDDPHVAIIGGGMAGLVCALNLEARGVQSTVFDTGIHGLGGRLGTRIIEPQGLIFDHAAQFFTADDSRFIKLVDGWLEKGLVREWKGAVGELEIGGSFSQFPSSSPPRYIAANGMRSLADSLLLESQMVNLVRPCWISKLEPLNGMWHLSENGTPRGQFDVIVIAHNGKCANRLLSASGLPLVAKQMKKLDLSSIWALLAAFDDPLPTVNFEGAFVKGVESLSWMGNNSAKLGNGRTPPHCWTFFSTAAYGKQNKVPQENIPTVTAEKVKAGMLQGVEIALGLPEGSLPKPVYTRLQLWGAALPKNTPAVPCIFDPQGRAGICGDWLLGSNLESAAISGAALGNHIAEFLQNGEANPEEFAIGLHDRLSPLAGHDIGQFPGLTSVGEKEEANAYQLL", "length": 486, "header": "tr|Q9SR09-1|Q9SR09_ARATH Isoform 1 of FAD/NAD(P)-binding oxidoreductase family protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SR09-1" }, "isoforms": [ { "isoform_ac": "Q9SR09-1", "url": "https://www.uniprot.org/uniprotkb/Q9SR09/entry", "sequence": { "sequence": 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} } ], "glycosylation": [], "phosphorylation": [ { "start_pos": 11, "end_pos": 11, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SR09", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SR09" }, { "database": "PubMed", "id": "22060019", "url": "https://glygen.org/publication/PubMed/22060019" } ], "site_lbl": "Ser11" }, { "start_pos": 3, "end_pos": 3, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Thr", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SR09", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SR09" }, { "database": "PubMed", "id": "22060019", "url": "https://glygen.org/publication/PubMed/22060019" } ], "site_lbl": "Thr3" }, { "start_pos": 4, "end_pos": 4, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SR09", "url": 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E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9SR09", "url": "https://www.uniprot.org/uniprotkb/Q9SR09" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Nitrate and ammonium lead to distinct global dynamic 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"MAENLFSGLPPPSSSQQQELPISPIPDESKIETSSPAPILVLKSALKRSKPEESAPNLSAPPVLKSALKRSKPSESTPEPVPEPEAPKKRLQFKTSTDASEEQVIEAMQKITSHIKNPSKFSKASKLAIRLIQAGSVKPETSSYFIAILEAAMSSKTPCTDRSVRADYHALFSAAQDVAECLDKSQKNLLTIWTFKAVVANDLFTDDSFMFSKTATRIKEAISDLPVSTEEDDVEEAAALEEAAVKDNGDGQTTQDVAEAASAGDNEAVESDPFGLDAWIPSSGKKNGKTKIKRTNEDPDAEENKRFLRSKREALITCLEIAARRYKVPWCQTVIDILVKHAFENVSRFTSQQRQAVEKLWASVREQHLRRKQGKSVTGKLDVTAFESLQDKYANEKMSIRSSVGASGERRAQQWLG", "length": 417, "header": "tr|Q9SR18-1|Q9SR18_ARATH Isoform 1 of Nucleolar/coiled-body phosphoprotein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SR18-1" }, "locus": { "chromosome": "3", "start_pos": 1227360, "end_pos": 1229763, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G04560.1", "url": "https://www.ensemblgenomes.org/id/AT3G04560.1" }, { "database": "Ensembl Peptide", "id": "AT3G04560.1", "url": "https://www.ensemblgenomes.org/id/AT3G04560.1" } ] } } ], "glycosylation": [], "phosphorylation": [ { "start_pos": 157, "end_pos": 157, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Thr", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SR18", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SR18" } ], "site_lbl": "Thr157" }, { "start_pos": 160, "end_pos": 160, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Thr", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SR18", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SR18" } ], "site_lbl": "Thr160" }, { "start_pos": 35, "end_pos": 35, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SR18", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SR18" }, { "database": "PubMed", "id": "28011693", "url": "https://glygen.org/publication/PubMed/28011693" } ], "site_lbl": "Ser35" }, { "start_pos": 402, "end_pos": 402, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SR18", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SR18" } ], "site_lbl": "Ser402" }, { "start_pos": 54, "end_pos": 54, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SR18", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SR18" } ], "site_lbl": "Ser54" }, { "start_pos": 59, "end_pos": 59, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SR18", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SR18" } ], "site_lbl": "Ser59" }, { "start_pos": 76, "end_pos": 76, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SR18", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SR18" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ], "site_lbl": "Ser76" }, { "start_pos": 77, "end_pos": 77, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Thr", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SR18", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SR18" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" } ], "site_lbl": "Thr77" } ], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9SR18", "url": "https://www.uniprot.org/uniprotkb/Q9SR18" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "A large-scale protein phosphorylation analysis reveals novel phosphorylation motifs and phosphoregulatory networks in Arabidopsis.", "journal": "Journal of proteomics", "date": "2013-01-14", "authors": "Wang Xu, Bian Yangyang, Cheng Kai, Gu Li-Fei, Ye Mingliang, Zou Hanfa, Sun Samuel Sai-Ming, He Jun-Xian", "evidence": [ { "database": "iPTMnet", "id": "Q9SR18", "url": 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"authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9SR18", "url": "https://www.uniprot.org/uniprotkb/Q9SR18" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] }, { "title": "Protein Phosphatase 2Cs and Microtubule-Associated Stress Protein 1 Control Microtubule Stability, Plant Growth, and Drought Response.", "journal": "The Plant cell", "date": "2017-01", "authors": "Bhaskara Govinal Badiger, Wen Tuan-Nan, Nguyen Thao Thi, Verslues Paul E", "evidence": [ { "database": "iPTMnet", "id": "Q9SR18", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SR18" } ], "reference": [ { "type": "PubMed", "id": "28011693", "url": "https://glygen.org/publication/PubMed/28011693" } ] } ], "pathway": [ { "id": "ath:AT3G04560", "name": "", "url": 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"https://www.ensemblgenomes.org/id/AT3G09310.1" }, { "database": "Ensembl Peptide", "id": "AT3G09310.1", "url": "https://www.ensemblgenomes.org/id/AT3G09310.1" } ] } } ], "glycosylation": [], "phosphorylation": [ { "start_pos": 107, "end_pos": 107, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SR32", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SR32" }, { "database": "PubMed", "id": "22060019", "url": "https://glygen.org/publication/PubMed/22060019" } ], "site_lbl": "Ser107" }, { "start_pos": 99, "end_pos": 99, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Tyr", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SR32", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SR32" }, { "database": "PubMed", "id": "22060019", "url": "https://glygen.org/publication/PubMed/22060019" } ], "site_lbl": "Tyr99" } ], "glycation": [], 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Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9SR32", "url": "https://www.uniprot.org/uniprotkb/Q9SR32" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Nitrate and ammonium lead to distinct global dynamic phosphorylation patterns when resupplied to nitrogen-starved Arabidopsis seedlings.", "journal": "The Plant journal : for cell and molecular biology", "date": "2012-03", "authors": "Engelsberger Wolfgang R, Schulze Waltraud X", "evidence": [ { "database": "iPTMnet", "id": "Q9SR32", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SR32" } ], "reference": [ { "type": "PubMed", "id": "22060019", "url": "https://glygen.org/publication/PubMed/22060019" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9SR32", "url": "https://www.uniprot.org/uniprotkb/Q9SR32" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], 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"GeneID", "categories": [ "Genome Annotation" ] }, { "id": "ath:AT3G09280", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G09280", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "RKLGGHE", "url": "https://omabrowser.org/oma/group/RKLGGHE/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "Q9SR35", "url": "https://www.orthodb.org/?gene=Q9SR35", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR34558", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR34558", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR34558:SF9", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR34558:SF9", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "NP_187539", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_187539", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G09280", "url": 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Isoform 1 of Transmembrane protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9SR35-1" }, "locus": { "chromosome": "3", "start_pos": 2850735, "end_pos": 2851272, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G09280.1", "url": "https://www.ensemblgenomes.org/id/AT3G09280.1" }, { "database": "Ensembl Peptide", "id": "AT3G09280.1", "url": "https://www.ensemblgenomes.org/id/AT3G09280.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, 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S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9SR35", "url": "https://www.uniprot.org/uniprotkb/Q9SR35" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9SR35", "url": "https://www.uniprot.org/uniprotkb/Q9SR35" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G09280", 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"https://www.uniprot.org/uniprotkb/Q9SR48", "locus": {} } ], "crossref": [ { "id": "843080", "url": "https://www.ncbi.nlm.nih.gov/gene/843080", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR005516", "url": "https://www.ebi.ac.uk/interpro/entry/IPR005516", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT1G67590", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT1G67590", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "PQKEQDY", "url": "https://omabrowser.org/oma/group/PQKEQDY/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "F4HTN8", "url": "https://www.orthodb.org/?gene=F4HTN8", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "Q9SR48", "url": "https://www.orthodb.org/?gene=Q9SR48", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR31471", "url": 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"categories": [ "Protein" ] }, { "id": "Q9SR48-1", "url": "https://www.uniprot.org/uniprotkb/Q9SR48-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MRSSVEDNKGWIGPATPEISNGFEFQKGSNRTPNHHRSTMGKPAPSKWDDAQKWLSGVGFARGGGGGGDKSSHHSRSNKPRNSNADDLRLIASASQREREGEDQYVEYDDEEMAAGRPEVETKNVDCGESVWRKESSINPTAVIRSVCVRDMGTEMTPIGSQEPSRTATPVRATTPVGRSPVTSPVRASQRGEAVGVVMETVTEVRRVESNNSEKVNGFVESKKAMSAMEARAMAWDEAERAKFMARYKREEVKIQAWENHEKRKAEMEMKKMEVKAERMKARAEEKLANKLAATKRIAEERRANAEAKLNEKAVKTSEKADYIRRSGHLPSSFSFSFKLPSRCWCQ", "length": 347, "header": "tr|Q9SR48-1|Q9SR48_ARATH Isoform 1 of Remorin family protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SR48-1" }, "isoforms": [ { "isoform_ac": "F4HTN8-1", "url": "https://www.uniprot.org/uniprotkb/F4HTN8/entry", "sequence": { "sequence": "MRSSVEDNKGWIGPATPEISNGFEFQKGSNRTPNHHRSTMGKPAPSKWDDAQKWLSGVGFARGGGGGGDKSSHHSRSNKPRNSNADDLRLIASASQREREGEDQYVEYDDEEMAAGRPEVETKNVDCGESVWRKESSINPTAVIRSVCVRDMGTEMTPIGSQEPSRTATPVRATTPVGRSPVTSPVRASQRGEAVGVVMETVTEVRRVESNNSEKVNGFVESKKAMSAMEARAMAWDEAERAKFMARYKREEVKIQAWENHEKRKAEMEMKKMEVRCSV", "length": 279, "header": "tr|F4HTN8-1|F4HTN8_ARATH Computationally mapped isoform of Remorin family protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=2 CANONICAL=Q9SR48-1" }, "locus": { "chromosome": "1", "start_pos": 25333058, "end_pos": 25334943, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT1G67590.2", "url": "https://www.ensemblgenomes.org/id/AT1G67590.2" }, { "database": "Ensembl Peptide", "id": "AT1G67590.2", "url": "https://www.ensemblgenomes.org/id/AT1G67590.2" } ] } }, { "isoform_ac": "Q9SR48-1", "url": "https://www.uniprot.org/uniprotkb/Q9SR48/entry", "sequence": { "sequence": "MRSSVEDNKGWIGPATPEISNGFEFQKGSNRTPNHHRSTMGKPAPSKWDDAQKWLSGVGFARGGGGGGDKSSHHSRSNKPRNSNADDLRLIASASQREREGEDQYVEYDDEEMAAGRPEVETKNVDCGESVWRKESSINPTAVIRSVCVRDMGTEMTPIGSQEPSRTATPVRATTPVGRSPVTSPVRASQRGEAVGVVMETVTEVRRVESNNSEKVNGFVESKKAMSAMEARAMAWDEAERAKFMARYKREEVKIQAWENHEKRKAEMEMKKMEVKAERMKARAEEKLANKLAATKRIAEERRANAEAKLNEKAVKTSEKADYIRRSGHLPSSFSFSFKLPSRCWCQ", "length": 347, "header": "tr|Q9SR48-1|Q9SR48_ARATH Isoform 1 of Remorin family protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SR48-1" }, "locus": { "chromosome": "1", "start_pos": 25333058, "end_pos": 25335025, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT1G67590.1", "url": "https://www.ensemblgenomes.org/id/AT1G67590.1" }, { "database": "Ensembl Peptide", "id": "AT1G67590.1", "url": "https://www.ensemblgenomes.org/id/AT1G67590.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 1 of the 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Venter J C, Davis R W", "evidence": [ { "database": "UniProtKB", "id": "Q9SR48", "url": "https://www.uniprot.org/uniprotkb/Q9SR48" } ], "reference": [ { "type": "PubMed", "id": "11130712", "url": "https://glygen.org/publication/PubMed/11130712" } ] }, { "title": "Site-specific phosphorylation profiling of Arabidopsis proteins by mass spectrometry and peptide chip analysis.", "journal": "J. Proteome Res.", "date": "2008", "authors": "de la Fuente van Bentem Sergio, Anrather Dorothea, Dohnal Ilse, Roitinger Elisabeth, Csaszar Edina, Joore Jos, Buijnink Joshua, Carreri Alessandro, Forzani Celine, Lorkovic Zdravko J, Barta Andrea, Lecourieux David, Verhounig Andreas, Jonak Claudia, Hirt Heribert", "evidence": [ { "database": "UniProtKB", "id": "Q9SR48", "url": "https://www.uniprot.org/uniprotkb/Q9SR48" } ], "reference": [ { "type": "PubMed", "id": "18433157", "url": "https://glygen.org/publication/PubMed/18433157" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9SR48", "url": "https://www.uniprot.org/uniprotkb/Q9SR48" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT1G67590", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT1G67590", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q9SR48", "url": "https://www.uniprot.org/uniprotkb/Q9SR48" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "Q9SR48", "url": "https://www.uniprot.org/uniprotkb/Q9SR48" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 211, "end_pos": 213, "annotation": "n_glycosylation_sequon" }, { "start_pos": 30, "end_pos": 32, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], 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"AT3G09950.1", "url": "https://www.ensemblgenomes.org/id/AT3G09950.1" }, { "database": "Ensembl Peptide", "id": "AT3G09950.1", "url": "https://www.ensemblgenomes.org/id/AT3G09950.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, 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"https://www.ebi.ac.uk/interpro/entry/IPR008971", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR018253", "url": "https://www.ebi.ac.uk/interpro/entry/IPR018253", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036869", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036869", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR051339", "url": "https://www.ebi.ac.uk/interpro/entry/IPR051339", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT3G08910", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G08910", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "FRMELTH", "url": "https://omabrowser.org/oma/group/FRMELTH/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "Q9SR91", "url": "https://www.orthodb.org/?gene=Q9SR91", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR24078", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24078", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR24078:SF575", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24078:SF575", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00226", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00226", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF01556", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF01556", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_187503", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_187503", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G08910", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G08910", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9SR91", "url": "https://www.uniprot.org/uniprotkb/Q9SR91", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9SR91-1", "url": "https://www.uniprot.org/uniprotkb/Q9SR91-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MGVDYYKVLQVDRNAKDDDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKRAIYDQYGEEGLTSQAPPPGAGGGFSDGGASFRFNGRSADDIFSEFFGFTRPFGDSRGAGPSNGFRFAEDVFSSNVVPPRKAAPIERQLPCSLEDLYKGVSKKMKISRDVLDSSGRPTTVEEILTIEIKPGWKKGTKITFPEKGNEQRGIIPSDLVFIVDEKPHAVFKRDGNDLVMTQKIPLVEALTGYTAQVSTLDGRSVTVPINNVISPSYEEVVKGEGMPIPKDPSKKGNLRIKFTVKFPSRLTTEQKSGIKRMFSSS", "length": 323, "header": "tr|Q9SR91-1|Q9SR91_ARATH Isoform 1 of DNAJ heat shock family protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SR91-1" }, "isoforms": [ { "isoform_ac": "Q9SR91-1", "url": "https://www.uniprot.org/uniprotkb/Q9SR91/entry", "sequence": { "sequence": "MGVDYYKVLQVDRNAKDDDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKRAIYDQYGEEGLTSQAPPPGAGGGFSDGGASFRFNGRSADDIFSEFFGFTRPFGDSRGAGPSNGFRFAEDVFSSNVVPPRKAAPIERQLPCSLEDLYKGVSKKMKISRDVLDSSGRPTTVEEILTIEIKPGWKKGTKITFPEKGNEQRGIIPSDLVFIVDEKPHAVFKRDGNDLVMTQKIPLVEALTGYTAQVSTLDGRSVTVPINNVISPSYEEVVKGEGMPIPKDPSKKGNLRIKFTVKFPSRLTTEQKSGIKRMFSSS", "length": 323, "header": "tr|Q9SR91-1|Q9SR91_ARATH Isoform 1 of DNAJ heat shock family protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SR91-1" }, "locus": { "chromosome": "3", "start_pos": 2710065, "end_pos": 2712042, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G08910.1", "url": "https://www.ensemblgenomes.org/id/AT3G08910.1" }, { "database": "Ensembl Peptide", "id": "AT3G08910.1", "url": "https://www.ensemblgenomes.org/id/AT3G08910.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis 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Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9SR91", "url": "https://www.uniprot.org/uniprotkb/Q9SR91" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9SR91", "url": "https://www.uniprot.org/uniprotkb/Q9SR91" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G08910", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G08910", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "Q9SR91", "url": "https://www.uniprot.org/uniprotkb/Q9SR91" } ], "pmid": "" }, { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "Q9SR91", "url": 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"https://www.ebi.ac.uk/interpro/entry/IPR036047", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT1G76830", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT1G76830", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "PTHR31111", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31111", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR31111:SF138", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31111:SF138", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00646", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00646", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF08268", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF08268", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PR:Q9SRD0", "url": 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], "protein_names": [ { "name": "Uncharacterized protein At1g76660", "type": "recommended", "evidence": [ { "id": "Q9SRE5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SRE5/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9SRE5", "url": "https://www.uniprot.org/uniprotkb/Q9SRE5" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9SRE5", "locus": {} } ], "crossref": [ { "id": "Q9SRE5", "url": "https://alphafold.ebi.ac.uk/entry/Q9SRE5", "database": "AlphaFoldDB", "categories": [] }, { "id": "AT1G76660", "url": "https://bar.utoronto.ca/thalemine/portal.do?externalids=AT1G76660", "database": "Araport", "categories": [ 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"https://glygen.org/publication/PubMed/25561503" } ], "site_lbl": "Ser207" }, { "start_pos": 214, "end_pos": 214, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SRE5", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SRE5" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ], "site_lbl": "Ser214" }, { "start_pos": 367, "end_pos": 367, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SRE5", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SRE5" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ], "site_lbl": "Ser367" }, { "start_pos": 408, "end_pos": 408, 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D B, Kwan A, Lam B, Langin-Hooper S, Lee A, Lee J M, Lenz C A, Li J H, Li Y, Lin X, Liu S X, Liu Z A, Luros J S, Maiti R, Marziali A, Militscher J, Miranda M, Nguyen M, Nierman W C, Osborne B I, Pai G, Peterson J, Pham P K, Rizzo M, Rooney T, Rowley D, Sakano H, Salzberg S L, Schwartz J R, Shinn P, Southwick A M, Sun H, Tallon L J, Tambunga G, Toriumi M J, Town C D, Utterback T, Van Aken S, Vaysberg M, Vysotskaia V S, Walker M, Wu D, Yu G, Fraser C M, Venter J C, Davis R W", "evidence": [ { "database": "UniProtKB", "id": "Q9SRE5", "url": "https://www.uniprot.org/uniprotkb/Q9SRE5" } ], "reference": [ { "type": "PubMed", "id": "11130712", "url": "https://glygen.org/publication/PubMed/11130712" } ] }, { "title": "Functional annotation of a full-length Arabidopsis cDNA collection.", "journal": "Science", "date": "2002", "authors": "Seki Motoaki, Narusaka Mari, Kamiya Asako, Ishida Junko, Satou Masakazu, Sakurai Tetsuya, Nakajima Maiko, Enju Akiko, Akiyama Kenji, Oono Youko, Muramatsu Masami, Hayashizaki Yoshihide, Kawai Jun, Carninci Piero, Itoh Masayoshi, Ishii Yoshiyuki, Arakawa Takahiro, Shibata Kazuhiro, Shinagawa Akira, Shinozaki Kazuo", "evidence": [ { "database": "UniProtKB", "id": "Q9SRE5", "url": "https://www.uniprot.org/uniprotkb/Q9SRE5" } ], "reference": [ { "type": "PubMed", "id": "11910074", "url": "https://glygen.org/publication/PubMed/11910074" } ] }, { "title": "Empirical analysis of transcriptional activity in the Arabidopsis genome.", "journal": "Science", "date": "2003", "authors": "Yamada Kayoko, Lim Jun, Dale Joseph M, Chen Huaming, Shinn Paul, Palm Curtis J, Southwick Audrey M, Wu Hank C, Kim Christopher, Nguyen Michelle, Pham Paul, Cheuk Rosa, Karlin-Newmann George, Liu Shirley X, Lam Bao, Sakano Hitomi, Wu Troy, Yu Guixia, Miranda Molly, Quach Hong L, Tripp Matthew, Chang Charlie H, Lee Jeong M, Toriumi Mitsue, Chan Marie M H, Tang Carolyn C, Onodera Courtney S, Deng Justine M, Akiyama Kenji, Ansari Yasser, Arakawa Takahiro, Banh Jenny, Banno Fumika, Bowser Leah, Brooks Shelise, Carninci Piero, Chao Qimin, Choy Nathan, Enju Akiko, Goldsmith Andrew D, Gurjal Mani, Hansen Nancy F, Hayashizaki Yoshihide, Johnson-Hopson Chanda, Hsuan Vickie W, Iida Kei, Karnes Meagan, Khan Shehnaz, Koesema Eric, Ishida Junko, Jiang Paul X, Jones Ted, Kawai Jun, Kamiya Asako, Meyers Cristina, Nakajima Maiko, Narusaka Mari, Seki Motoaki, Sakurai Tetsuya, Satou Masakazu, Tamse Racquel, Vaysberg Maria, Wallender Erika K, Wong Cecilia, Yamamura Yuki, Yuan Shiaulou, Shinozaki Kazuo, Davis Ronald W, Theologis Athanasios, Ecker Joseph R", "evidence": [ { "database": "UniProtKB", "id": "Q9SRE5", "url": "https://www.uniprot.org/uniprotkb/Q9SRE5" } ], "reference": [ { "type": "PubMed", "id": "14593172", "url": "https://glygen.org/publication/PubMed/14593172" } ] }, { "title": "Quantitative phosphoproteomics of early elicitor signaling in Arabidopsis.", "journal": "Molecular & cellular proteomics : MCP", "date": "2007-07", "authors": "Benschop Joris J, Mohammed Shabaz, O'Flaherty Martina, Heck Albert J R, Slijper Monique, Menke Frank L H", "evidence": [ { "database": "iPTMnet", "id": "Q9SRE5", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SRE5" } ], "reference": [ { "type": "PubMed", "id": "17317660", "url": "https://glygen.org/publication/PubMed/17317660" } ] }, { "title": "Large-scale comparative phosphoproteomics identifies conserved phosphorylation sites in plants.", "journal": "Plant physiology", "date": "2010-07", "authors": "Nakagami Hirofumi, Sugiyama Naoyuki, Mochida Keiichi, Daudi Arsalan, Yoshida Yuko, Toyoda Tetsuro, Tomita Masaru, Ishihama Yasushi, Shirasu Ken", "evidence": [ { "database": "iPTMnet", "id": "Q9SRE5", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SRE5" } ], "reference": [ { "type": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" } ] }, { "title": "Comparative phosphoproteome profiling reveals a function of the STN8 kinase in fine-tuning of cyclic electron flow (CEF).", "journal": "Proceedings of the National Academy of Sciences of the United States of America", "date": "2011-08-02", "authors": "Reiland Sonja, Finazzi Giovanni, Endler Anne, Willig Adrian, Baerenfaller Katja, Grossmann Jonas, Gerrits Bertran, Rutishauser Dorothea, Gruissem Wilhelm, Rochaix Jean-David, Baginsky Sacha", "evidence": [ { "database": "iPTMnet", "id": "Q9SRE5", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SRE5" } ], "reference": [ { "type": "PubMed", "id": "21768351", "url": "https://glygen.org/publication/PubMed/21768351" } ] }, { "title": "A large-scale protein phosphorylation analysis reveals novel phosphorylation motifs and phosphoregulatory networks in Arabidopsis.", "journal": "Journal of proteomics", "date": "2013-01-14", "authors": "Wang Xu, Bian Yangyang, Cheng Kai, Gu Li-Fei, Ye Mingliang, Zou Hanfa, Sun Samuel Sai-Ming, He Jun-Xian", "evidence": [ { "database": "iPTMnet", "id": "Q9SRE5", "url": 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"authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9SRE5", "url": "https://www.uniprot.org/uniprotkb/Q9SRE5" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] }, { "title": "Capturing the phosphorylation and protein interaction landscape of the plant TOR kinase.", "journal": "Nature plants", "date": "2019-03", "authors": "Van Leene Jelle, Han Chao, Gadeyne Astrid, Eeckhout Dominique, Matthijs Caroline, Cannoot Bernard, De Winne Nancy, Persiau Geert, Van De Slijke Eveline, Van de Cotte Brigitte, Stes Elisabeth, Van Bel Michiel, Storme Veronique, Impens Francis, Gevaert Kris, Vandepoele Klaas, De Smet Ive, De Jaeger Geert", "evidence": [ { "database": "iPTMnet", "id": "Q9SRE5", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SRE5" } ], "reference": [ { "type": "PubMed", "id": 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T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9SRI3", "url": "https://www.uniprot.org/uniprotkb/Q9SRI3" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9SRI3", "url": "https://www.uniprot.org/uniprotkb/Q9SRI3" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": 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"common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9SRM8", "locus": {} } ], "crossref": [ { "id": "820341", "url": "https://www.ncbi.nlm.nih.gov/gene/820341", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "ath:AT3G11690", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G11690", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "ETTAECA", "url": "https://omabrowser.org/oma/group/ETTAECA/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "Q9SRM8", "url": "https://www.orthodb.org/?gene=Q9SRM8", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR33264", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR33264", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR33264:SF8", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR33264:SF8", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "NP_566397", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_566397", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G11690", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G11690", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9SRM8", "url": "https://www.uniprot.org/uniprotkb/Q9SRM8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9SRM8-1", "url": "https://www.uniprot.org/uniprotkb/Q9SRM8-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MNTTLRYDPRQISRQTKPSDTPSSSPSRSNRRQPLLQRSLSSPSPRASCGGSTPAEFCGGTTASCAAVWCCCPCGLVNLLVLAIYKVPKGICRRAIRSRRRKQLVKNGILPPLPTDGKNERMQRVFQNSEFAIHPLDSDDVSDDEDDDNFLDLKYIGKSVATGFTTEEETDEDDEAVLALEKEMWNRFYGAGFWRSPSQRESVSSPRVSKSLSSSPRQSFTEVYRNRDTTVRGGGGGATVVAATPRAVRHFD", "length": 252, "header": "tr|Q9SRM8-1|Q9SRM8_ARATH Isoform 1 of Uncharacterized protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SRM8-1" }, "isoforms": [ { "isoform_ac": "Q9SRM8-1", "url": "https://www.uniprot.org/uniprotkb/Q9SRM8/entry", "sequence": { "sequence": "MNTTLRYDPRQISRQTKPSDTPSSSPSRSNRRQPLLQRSLSSPSPRASCGGSTPAEFCGGTTASCAAVWCCCPCGLVNLLVLAIYKVPKGICRRAIRSRRRKQLVKNGILPPLPTDGKNERMQRVFQNSEFAIHPLDSDDVSDDEDDDNFLDLKYIGKSVATGFTTEEETDEDDEAVLALEKEMWNRFYGAGFWRSPSQRESVSSPRVSKSLSSSPRQSFTEVYRNRDTTVRGGGGGATVVAATPRAVRHFD", "length": 252, "header": "tr|Q9SRM8-1|Q9SRM8_ARATH Isoform 1 of Uncharacterized protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SRM8-1" }, "locus": { "chromosome": "3", "start_pos": 3694956, "end_pos": 3696749, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G11690.1", "url": "https://www.ensemblgenomes.org/id/AT3G11690.1" }, { "database": "Ensembl Peptide", "id": "AT3G11690.1", "url": "https://www.ensemblgenomes.org/id/AT3G11690.1" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "other", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 115, "start_aa": "Thr", "end_pos": 115, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr115", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ], "filter_code": "000000000000000010000.00000000001000.0.01000" } ], "phosphorylation": [ { "start_pos": 209, "end_pos": 209, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SRM8", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SRM8" } ], "site_lbl": "Ser209" }, { "start_pos": 41, "end_pos": 41, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SRM8", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SRM8" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "28011693", "url": "https://glygen.org/publication/PubMed/28011693" } ], "site_lbl": "Ser41" }, { "start_pos": 7, "end_pos": 7, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Tyr", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SRM8", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SRM8" } ], "site_lbl": "Tyr7" } ], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9SRM8", "url": "https://www.uniprot.org/uniprotkb/Q9SRM8" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Quantitative phosphoproteomics of the ataxia telangiectasia-mutated (ATM) and ataxia telangiectasia-mutated and rad3-related (ATR) dependent DNA damage response in Arabidopsis thaliana.", "journal": "Molecular & cellular 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"id": "AT3G03320", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G03320", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9SRN6", "url": "https://www.uniprot.org/uniprotkb/Q9SRN6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9SRN6-1", "url": "https://www.uniprot.org/uniprotkb/Q9SRN6-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MEQPMSPGTKSVDLRECMESLLRFSLRSHLNESVPSFDLDLTRDFCLHLLGEATDSTEKSAVYKLLATALSECLASEGDKNSNLEKYSKLIHGLGYDLINMLKEVNFELHVQEPYFTQLKDGLKTVEGRCAVGDYMRISSGDFLLFNKCLLLEVQDVHRYTSFSEMLKVEGLAKVLPGVESIEEGVQVYRNFYSEEKERMNGVVAIRVAKPANQPSAALAGVLSELKSSGIKSLLDEYTAGVTS", "length": 244, "header": "tr|Q9SRN6-1|Q9SRN6_ARATH Isoform 1 of RNA-binding ASCH domain protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SRN6-1" }, "isoforms": [ { "isoform_ac": "Q9SRN6-1", "url": "https://www.uniprot.org/uniprotkb/Q9SRN6/entry", "sequence": { "sequence": "MEQPMSPGTKSVDLRECMESLLRFSLRSHLNESVPSFDLDLTRDFCLHLLGEATDSTEKSAVYKLLATALSECLASEGDKNSNLEKYSKLIHGLGYDLINMLKEVNFELHVQEPYFTQLKDGLKTVEGRCAVGDYMRISSGDFLLFNKCLLLEVQDVHRYTSFSEMLKVEGLAKVLPGVESIEEGVQVYRNFYSEEKERMNGVVAIRVAKPANQPSAALAGVLSELKSSGIKSLLDEYTAGVTS", "length": 244, "header": "tr|Q9SRN6-1|Q9SRN6_ARATH Isoform 1 of RNA-binding ASCH domain protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SRN6-1" }, "locus": { "chromosome": "3", "start_pos": 781715, "end_pos": 783464, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G03320.1", "url": "https://www.ensemblgenomes.org/id/AT3G03320.1" }, { "database": "Ensembl Peptide", "id": "AT3G03320.1", "url": "https://www.ensemblgenomes.org/id/AT3G03320.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9SRN6", "url": "https://www.uniprot.org/uniprotkb/Q9SRN6" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9SRN6", "url": "https://www.uniprot.org/uniprotkb/Q9SRN6" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G03320", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G03320", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": {}, "pro_annotation": [], "site_annotation": [ { "start_pos": 31, "end_pos": 33, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "Q9SRN6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SRN6" }, { "id": "SM01022", "database": "SMART", "url": "http://smart.embl.de/smart/do_annotation.pl?DOMAIN=SM01022" } ], "ann_type": 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"https://omabrowser.org/oma/group/HIYASEF/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A1I9LPQ4", "url": "https://www.orthodb.org/?gene=A0A1I9LPQ4", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "A0A1I9LPQ5", "url": "https://www.orthodb.org/?gene=A0A1I9LPQ5", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "Q9SRQ4", "url": "https://www.orthodb.org/?gene=Q9SRQ4", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR47176", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR47176", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR47176:SF2", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR47176:SF2", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF01026", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF01026", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "AT3G03500", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G03500", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "A0A1I9LPQ4", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LPQ4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A1I9LPQ4-1", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LPQ4-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A1I9LPQ5", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LPQ5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A1I9LPQ5-1", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LPQ5-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9SRQ4", "url": "https://www.uniprot.org/uniprotkb/Q9SRQ4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9SRQ4-1", "url": "https://www.uniprot.org/uniprotkb/Q9SRQ4-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MKLFDAHCHLQDKRVIDKASQLISAALAVGVTNFAVNGTSEKDWNLVKEMGETYPSVVPCFGLHPWFIADRSPHWFKTLKKFFETTPTAAVGEIGLDKGPLAGGIDYSDQLVVFRPQLELAKELNKPVAVHCIDAFDDLLEIMRSIGPFPAGVILHSFNGSAEVVPKLAELGAYFSFSGWFTYIDEKIAKKTLKSIPSDRLLLETDSPDGLPKSDESSSDPKPTLNEPANILAVLDYVANLSNMKKEELAELSYVNSVRLFSYPGSKLLTDQ", "length": 272, "header": "tr|Q9SRQ4-1|Q9SRQ4_ARATH Isoform 1 of TatD related DNase OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SRQ4-1" }, "isoforms": [ { "isoform_ac": "A0A1I9LPQ4-1", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LPQ4/entry", "sequence": { "sequence": "MGFMYRRSFLQLMHKSFRSKFLLFLFSVLVCRFIADRSPHWFKTLKKFFETTPTAAVGEIGLDKGPLAGGIDYSDQLVVFRPQLELAKELNKPVAVHCIDAFDDLLEIMRSIGPFPAGVILHSFNGSAEVVPKLAELGAYFSFSGWFTYIDEKIAKKTLKSIPSDRLLLETDSPDGLPKSDESSSDPKPTLNEPANILAVLDYVANLSNMKKEELAELSYVNSVRLFSYPGSKLLTDQ", "length": 238, "header": "tr|A0A1I9LPQ4-1|A0A1I9LPQ4_ARATH Computationally mapped isoform of TatD related DNase OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SRQ4-1" }, "locus": { "chromosome": "3", "start_pos": 832718, "end_pos": 834600, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G03500.2", "url": "https://www.ensemblgenomes.org/id/AT3G03500.2" }, { "database": "Ensembl Peptide", "id": "AT3G03500.2", "url": "https://www.ensemblgenomes.org/id/AT3G03500.2" } ] } }, { "isoform_ac": "A0A1I9LPQ5-1", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LPQ5/entry", "sequence": { "sequence": "MKLFDAHCHLQDKRVIDKASQLISAALAVGVTNFAVNGTSEKDWNLVKEMGETYPSVVPCFGLHPWFIADRSPHWFKTLKKFFETTPTAAVGEIGLDKGPLAGGIDYSDQLVVFRPQLELAKELNKPVAVHCIDAFDDLLEIMRSIGPFPAGVILHSFNGSAEVVPKLAELGAYFSFSGWFTYIDEKIAKKTLKSVCFFPL", "length": 201, "header": "tr|A0A1I9LPQ5-1|A0A1I9LPQ5_ARATH Computationally mapped isoform of TatD related DNase OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SRQ4-1" }, "locus": { "chromosome": "3", "start_pos": 832718, "end_pos": 834600, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G03500.3", "url": "https://www.ensemblgenomes.org/id/AT3G03500.3" }, { "database": "Ensembl Peptide", "id": "AT3G03500.3", "url": "https://www.ensemblgenomes.org/id/AT3G03500.3" } ] } }, { "isoform_ac": "Q9SRQ4-1", "url": "https://www.uniprot.org/uniprotkb/Q9SRQ4/entry", "sequence": { "sequence": "MKLFDAHCHLQDKRVIDKASQLISAALAVGVTNFAVNGTSEKDWNLVKEMGETYPSVVPCFGLHPWFIADRSPHWFKTLKKFFETTPTAAVGEIGLDKGPLAGGIDYSDQLVVFRPQLELAKELNKPVAVHCIDAFDDLLEIMRSIGPFPAGVILHSFNGSAEVVPKLAELGAYFSFSGWFTYIDEKIAKKTLKSIPSDRLLLETDSPDGLPKSDESSSDPKPTLNEPANILAVLDYVANLSNMKKEELAELSYVNSVRLFSYPGSKLLTDQ", "length": 272, "header": "tr|Q9SRQ4-1|Q9SRQ4_ARATH Isoform 1 of TatD related DNase OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SRQ4-1" }, "locus": { "chromosome": "3", "start_pos": 832718, "end_pos": 834600, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G03500.1", "url": "https://www.ensemblgenomes.org/id/AT3G03500.1" }, { "database": "Ensembl Peptide", "id": "AT3G03500.1", 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M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9SRS2", "url": "https://www.uniprot.org/uniprotkb/Q9SRS2" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Large-scale comparative phosphoproteomics identifies conserved phosphorylation sites in plants.", "journal": "Plant physiology", "date": "2010-07", "authors": "Nakagami Hirofumi, Sugiyama Naoyuki, Mochida Keiichi, Daudi Arsalan, Yoshida Yuko, Toyoda Tetsuro, Tomita Masaru, Ishihama Yasushi, Shirasu Ken", "evidence": [ { "database": "iPTMnet", "id": "Q9SRS2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SRS2" } ], "reference": [ { "type": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" } ] }, { "title": "A large-scale protein phosphorylation analysis reveals 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"crossref": [ { "id": "AT3G07400", "url": "https://bar.utoronto.ca/thalemine/portal.do?externalids=AT3G07400", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "819928", "url": "https://www.ncbi.nlm.nih.gov/gene/819928", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR002921", "url": "https://www.ebi.ac.uk/interpro/entry/IPR002921", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR027417", "url": "https://www.ebi.ac.uk/interpro/entry/IPR027417", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR029058", "url": "https://www.ebi.ac.uk/interpro/entry/IPR029058", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT3G07400", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G07400", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "DYFKSYC", "url": "https://omabrowser.org/oma/group/DYFKSYC/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR47523", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR47523", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR47523:SF1", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR47523:SF1", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF01764", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF01764", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_187396", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_187396", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G07400", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G07400", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9SRS6", "url": "https://www.uniprot.org/uniprotkb/Q9SRS6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9SRS6-1", "url": "https://www.uniprot.org/uniprotkb/Q9SRS6-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MESIQSRVESWIRDQRARFLRVSWGPIQWRFRWPPWNGGDADQRIKIRREYEKRKKQIEDLCLALKSESVEDLQDILCCMVLSECVYKRPASEMVRAVNKFKADFGGQFISLERVQPSSDHVPHRYLLAEAGDTLFASFVGTRQYKDIMADANILQGHIFHDDVAEDECIEASEPIQSEPLKNNGEGLRNPKQLRQKPKPAAHRGFLARAKGIPALELYRLAQKKKRKLVLCGHSLGGAVAALATLAILRVVAASSKRGNENIHVKCITFSQPPVGNAALRDYVHEKGWHHYFKSYCIPEDLVPRILSPAYFHHYNEQRISMAGETEATNGQGVTSEAEKRKTKEHEQLVIGVGPVQNSFWRLSKLVPLEAVKKQLDRYIGKKEDPAETSTANESAVLAPIRDVVIEPQSLEIEEGKDGISLKPLPDAGNGPTVSGRSGGKTNSPNGFRVPYLPSYVPFGELYLLGTASVESLSEGEYSKLTSVRSVITELRERLQSHSMKSYRSRFQRIHDLCMDVDGFFGVDQQKQFPHLQQWLGLAVGGSIELGHIVESPVIRTATSIAPLGWKGVPGDKNAELLKVDITGFGLHLCSFVHAQVNGNWCSTTVESFPTTPAYSSDNVEQTELQKIRVVIGAPLKRPPSNQIVEDPLVPMFSSVDSKTGFPKEGINLGFFQEDKFVRPEGLEDLYIFCTSDFATVAKEVEVRTRRVRLLGLEGAGKTSLFRAILGQSMLSSMTHVENLQIQSDVQECIIGGVCYSDTVGVNLQELHLEASRFREELWKGVRNLSKKIDLIILVHNLSHRIPRYQNSTTLLQQQQPALALLLDEVKSLGIPWVLAITNKFSVSAHQQKSAIEAVLQAYQASPNTTGIVNSIPYIISGSGTSSLPWAAVNAGNDGSVGVPKMIFAPLDLVKKPFQRKDTVFPVDGVNSLCELVHRVLQTQEEACFEELARDRLLVELAKDRVVDGSQAKSSSMSAAAVGASLGAGLGLVLAVVMGAGSALRKP", "length": 1003, "header": "tr|Q9SRS6-1|Q9SRS6_ARATH Isoform 1 of Lipase class 3 family protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SRS6-1" }, "isoforms": [ { "isoform_ac": "Q9SRS6-1", "url": "https://www.uniprot.org/uniprotkb/Q9SRS6/entry", "sequence": { "sequence": "MESIQSRVESWIRDQRARFLRVSWGPIQWRFRWPPWNGGDADQRIKIRREYEKRKKQIEDLCLALKSESVEDLQDILCCMVLSECVYKRPASEMVRAVNKFKADFGGQFISLERVQPSSDHVPHRYLLAEAGDTLFASFVGTRQYKDIMADANILQGHIFHDDVAEDECIEASEPIQSEPLKNNGEGLRNPKQLRQKPKPAAHRGFLARAKGIPALELYRLAQKKKRKLVLCGHSLGGAVAALATLAILRVVAASSKRGNENIHVKCITFSQPPVGNAALRDYVHEKGWHHYFKSYCIPEDLVPRILSPAYFHHYNEQRISMAGETEATNGQGVTSEAEKRKTKEHEQLVIGVGPVQNSFWRLSKLVPLEAVKKQLDRYIGKKEDPAETSTANESAVLAPIRDVVIEPQSLEIEEGKDGISLKPLPDAGNGPTVSGRSGGKTNSPNGFRVPYLPSYVPFGELYLLGTASVESLSEGEYSKLTSVRSVITELRERLQSHSMKSYRSRFQRIHDLCMDVDGFFGVDQQKQFPHLQQWLGLAVGGSIELGHIVESPVIRTATSIAPLGWKGVPGDKNAELLKVDITGFGLHLCSFVHAQVNGNWCSTTVESFPTTPAYSSDNVEQTELQKIRVVIGAPLKRPPSNQIVEDPLVPMFSSVDSKTGFPKEGINLGFFQEDKFVRPEGLEDLYIFCTSDFATVAKEVEVRTRRVRLLGLEGAGKTSLFRAILGQSMLSSMTHVENLQIQSDVQECIIGGVCYSDTVGVNLQELHLEASRFREELWKGVRNLSKKIDLIILVHNLSHRIPRYQNSTTLLQQQQPALALLLDEVKSLGIPWVLAITNKFSVSAHQQKSAIEAVLQAYQASPNTTGIVNSIPYIISGSGTSSLPWAAVNAGNDGSVGVPKMIFAPLDLVKKPFQRKDTVFPVDGVNSLCELVHRVLQTQEEACFEELARDRLLVELAKDRVVDGSQAKSSSMSAAAVGASLGAGLGLVLAVVMGAGSALRKP", "length": 1003, "header": "tr|Q9SRS6-1|Q9SRS6_ARATH Isoform 1 of Lipase class 3 family protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SRS6-1" }, "locus": { "chromosome": "3", "start_pos": 2367222, "end_pos": 2372445, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G07400.1", "url": "https://www.ensemblgenomes.org/id/AT3G07400.1" }, { "database": "Ensembl Peptide", "id": "AT3G07400.1", "url": "https://www.ensemblgenomes.org/id/AT3G07400.1" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "other", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 433, "start_aa": "Thr", "end_pos": 433, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr433", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ], "filter_code": "000000000000000010000.00000000001000.0.01000" } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9SRS6", "url": "https://www.uniprot.org/uniprotkb/Q9SRS6" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9SRS6", "url": "https://www.uniprot.org/uniprotkb/Q9SRS6" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G07400", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G07400", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "lipid metabolic process", "id": "GO:0006629", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006629", "evidence": [ { "database": "UniProtKB", "id": "Q9SRS6", "url": "https://www.uniprot.org/uniprotkb/Q9SRS6" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "hydrolase activity", "id": "GO:0016787", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016787", "evidence": [ { "database": "UniProtKB", "id": "Q9SRS6", "url": "https://www.uniprot.org/uniprotkb/Q9SRS6" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 393, "end_pos": 395, "annotation": "n_glycosylation_sequon" }, { "start_pos": 784, "end_pos": 786, "annotation": "n_glycosylation_sequon" }, { "start_pos": 797, "end_pos": 799, "annotation": "n_glycosylation_sequon" }, { "start_pos": 807, "end_pos": 809, "annotation": "n_glycosylation_sequon" }, { "start_pos": 864, "end_pos": 866, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": 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"MGFSRAKRVTDPLAEEVRARLVGCSFSSGSEHTGDGIEDYEDDDSPCLSDLVQGFLEDEVDTVDDESCWCDQDSGSDSDSDSELGELPDFADDIAKLLRNSLREDSYGRTVLVHVARAMEMLSSLGSQPEQRAVFQRKVMSLLRELGHNAAICKTKWKSSGGLTAGNHEFIDVVYTPSASSQSVRFIVDLDFSSRFQIARPTSQYARVLQSLPAVFVGKGDDLKRILRLVCDAARISLRNRGLTLPPWRKNRYMQTRWLGPYKRTTNLTPSTSGVDTVMCRAIGFDNAVGGRLFVRTR", "length": 298, "header": "tr|Q9SRT1-1|Q9SRT1_ARATH Isoform 1 of Sulfate/thiosulfate import ATP-binding protein, putative (DUF506) OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9SRT1-1" }, "isoforms": [ { "isoform_ac": "Q9SRT1-1", "url": "https://www.uniprot.org/uniprotkb/Q9SRT1/entry", "sequence": { "sequence": "MGFSRAKRVTDPLAEEVRARLVGCSFSSGSEHTGDGIEDYEDDDSPCLSDLVQGFLEDEVDTVDDESCWCDQDSGSDSDSDSELGELPDFADDIAKLLRNSLREDSYGRTVLVHVARAMEMLSSLGSQPEQRAVFQRKVMSLLRELGHNAAICKTKWKSSGGLTAGNHEFIDVVYTPSASSQSVRFIVDLDFSSRFQIARPTSQYARVLQSLPAVFVGKGDDLKRILRLVCDAARISLRNRGLTLPPWRKNRYMQTRWLGPYKRTTNLTPSTSGVDTVMCRAIGFDNAVGGRLFVRTR", "length": 298, "header": "tr|Q9SRT1-1|Q9SRT1_ARATH Isoform 1 of Sulfate/thiosulfate import ATP-binding protein, putative (DUF506) OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9SRT1-1" }, "locus": { "chromosome": "3", "start_pos": 2347186, "end_pos": 2348791, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G07350.1", "url": "https://www.ensemblgenomes.org/id/AT3G07350.1" }, { "database": "Ensembl Peptide", "id": "AT3G07350.1", "url": "https://www.ensemblgenomes.org/id/AT3G07350.1" } ] } } ], "glycosylation": [], "phosphorylation": [ { "start_pos": 106, "end_pos": 106, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SRT1", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SRT1" }, { "database": "PubMed", "id": "22074104", "url": "https://glygen.org/publication/PubMed/22074104" } ], "site_lbl": "Ser106" } ], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of 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Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9SRT1", "url": "https://www.uniprot.org/uniprotkb/Q9SRT1" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Targeted quantitative phosphoproteomics approach for the detection of phospho-tyrosine signaling in plants.", "journal": "Journal of proteome research", "date": "2012-01-01", "authors": "Mithoe Sharon C, Boersema Paul J, Berke Lidija, Snel Berend, Heck Albert J R, Menke Frank L H", "evidence": [ { "database": "iPTMnet", "id": "Q9SRT1", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SRT1" } ], "reference": [ { "type": "PubMed", "id": "22074104", "url": "https://glygen.org/publication/PubMed/22074104" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9SRT1", "url": "https://www.uniprot.org/uniprotkb/Q9SRT1" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G07350", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G07350", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "Q9SRT1", "url": "https://www.uniprot.org/uniprotkb/Q9SRT1" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "Q9SRT1", "url": "https://www.uniprot.org/uniprotkb/Q9SRT1" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 2, "go_terms": [ { "name": "response to nutrient levels", "id": "GO:0031667", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031667", "evidence": [ { "database": "UniProtKB", "id": "Q9SRT1", "url": "https://www.uniprot.org/uniprotkb/Q9SRT1" } ], "pmid": "" }, { "name": "cellular response to hypoxia", "id": "GO:0071456", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0071456", "evidence": [ { "database": "UniProtKB", "id": "Q9SRT1", "url": "https://www.uniprot.org/uniprotkb/Q9SRT1" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 267, "end_pos": 269, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [ 106 ], "sequon_annotation_sites": [ { "start_pos": 267, "end_pos": 269 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", 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}, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 3 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "Q9SRT8-1", "uniprot_ac": "Q9SRT8", "uniprot_id": "Q9SRT8_ARATH", "mass": { "chemical_mass": 25615.0, "monoisotopic_mass": 25615.0 }, "refseq": {}, "gene_names": [ { "name": "F14P3.13", "type": "synonym", "evidence": [ { "id": "Q9SRT8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SRT8" } ] }, { "name": "F14P3_13", "type": "synonym", "evidence": [ { "id": "Q9SRT8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SRT8" } ] } ], "protein_names": [ { "name": "Small acidic-like protein", "type": "synonym", "evidence": [ { "id": "Q9SRT8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SRT8/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9SRT8", "url": "https://www.uniprot.org/uniprotkb/Q9SRT8" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9SRT8", "locus": {} } ], "crossref": [ { "id": "AT3G02220", "url": "https://bar.utoronto.ca/thalemine/portal.do?externalids=AT3G02220", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "821238", "url": "https://www.ncbi.nlm.nih.gov/gene/821238", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR019351", "url": "https://www.ebi.ac.uk/interpro/entry/IPR019351", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT3G02220", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G02220", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "HKNRHVF", "url": "https://omabrowser.org/oma/group/HKNRHVF/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR22876", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR22876", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR22876:SF5", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR22876:SF5", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF10217", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF10217", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "AT3G02220", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G02220", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9SRT8", "url": "https://www.uniprot.org/uniprotkb/Q9SRT8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9SRT8-1", "url": "https://www.uniprot.org/uniprotkb/Q9SRT8-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MGSRQGPPKHQNKFAWVPKAGVKINETEVGGRFRPLSEITGVCYRCREQIAWKRKYGKYKTLTEATKCQKCTKRNVRQAYHKLCPGCAKEQKVCAKCCQSVDQILGRDIYEVEAEQKLLDETIKNARERDRRTLLRAMNKDNKPNKSDEEASRSDSSKVGDVFPSTSLEEYANKSGRVSGIIGHGSVPDHAHDDASGPESDEDDNVGDDEHDLREDSDENEQSQLQK", "length": 227, "header": "tr|Q9SRT8-1|Q9SRT8_ARATH Isoform 1 of Small acidic-like protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SRT8-1" }, "isoforms": [ { "isoform_ac": "Q9SRT8-1", "url": "https://www.uniprot.org/uniprotkb/Q9SRT8/entry", "sequence": { "sequence": "MGSRQGPPKHQNKFAWVPKAGVKINETEVGGRFRPLSEITGVCYRCREQIAWKRKYGKYKTLTEATKCQKCTKRNVRQAYHKLCPGCAKEQKVCAKCCQSVDQILGRDIYEVEAEQKLLDETIKNARERDRRTLLRAMNKDNKPNKSDEEASRSDSSKVGDVFPSTSLEEYANKSGRVSGIIGHGSVPDHAHDDASGPESDEDDNVGDDEHDLREDSDENEQSQLQK", "length": 227, "header": "tr|Q9SRT8-1|Q9SRT8_ARATH Isoform 1 of Small acidic-like protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SRT8-1" }, "locus": { "chromosome": "3", "start_pos": 412041, "end_pos": 413742, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G02220.1", "url": "https://www.ensemblgenomes.org/id/AT3G02220.1" }, { "database": "Ensembl Peptide", "id": "AT3G02220.1", "url": "https://www.ensemblgenomes.org/id/AT3G02220.1" } ] } } ], "glycosylation": [], "phosphorylation": [ { "start_pos": 200, "end_pos": 200, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SRT8", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SRT8" }, { "database": "PubMed", "id": "24601666", "url": "https://glygen.org/publication/PubMed/24601666" }, { "database": "PubMed", "id": "29167316", "url": "https://glygen.org/publication/PubMed/29167316" } ], "site_lbl": "Ser200" }, { "start_pos": 217, "end_pos": 217, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SRT8", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SRT8" }, { "database": "PubMed", "id": "19376835", "url": "https://glygen.org/publication/PubMed/19376835" }, { "database": "PubMed", "id": "21768351", "url": "https://glygen.org/publication/PubMed/21768351" }, { "database": "PubMed", "id": "23660473", "url": "https://glygen.org/publication/PubMed/23660473" }, { "database": "PubMed", "id": "24601666", "url": "https://glygen.org/publication/PubMed/24601666" }, { "database": "PubMed", "id": "29167316", "url": "https://glygen.org/publication/PubMed/29167316" } ], "site_lbl": "Ser217" } ], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9SRT8", "url": "https://www.uniprot.org/uniprotkb/Q9SRT8" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Large-scale Arabidopsis phosphoproteome profiling reveals novel chloroplast kinase substrates and phosphorylation networks.", "journal": "Plant Physiol.", "date": "2009", "authors": "Reiland Sonja, Messerli Ga\u00eblle, Baerenfaller Katja, Gerrits Bertran, Endler Anne, Grossmann Jonas, Gruissem Wilhelm, Baginsky Sacha", "evidence": [ { "database": "UniProtKB", "id": "Q9SRT8", "url": "https://www.uniprot.org/uniprotkb/Q9SRT8" }, { "database": "iPTMnet", "id": "Q9SRT8", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SRT8" } ], "reference": [ { "type": "PubMed", "id": "19376835", "url": "https://glygen.org/publication/PubMed/19376835" } ] }, { "title": "Comparative phosphoproteome profiling reveals a function of the STN8 kinase in fine-tuning of cyclic electron flow (CEF).", "journal": "Proceedings of the National Academy of Sciences of the United States of America", "date": "2011-08-02", "authors": "Reiland Sonja, Finazzi Giovanni, Endler Anne, Willig Adrian, Baerenfaller Katja, Grossmann Jonas, Gerrits Bertran, Rutishauser Dorothea, Gruissem Wilhelm, Rochaix Jean-David, Baginsky Sacha", "evidence": [ { "database": "iPTMnet", "id": "Q9SRT8", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SRT8" } ], "reference": [ { "type": "PubMed", "id": "21768351", "url": "https://glygen.org/publication/PubMed/21768351" } ] }, { "title": "Quantitative measurement of phosphoproteome response to osmotic stress in arabidopsis based on Library-Assisted eXtracted Ion Chromatogram (LAXIC).", "journal": "Molecular & cellular proteomics : MCP", "date": "2013-08", "authors": "Xue Liang, Wang Pengcheng, Wang Lianshui, Renzi Emily, Radivojac Predrag, Tang Haixu, Arnold Randy, Zhu Jian-Kang, Tao W Andy", "evidence": [ { "database": "iPTMnet", "id": "Q9SRT8", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SRT8" } ], "reference": [ { "type": "PubMed", "id": "23660473", "url": "https://glygen.org/publication/PubMed/23660473" } ] }, { "title": "Identification of novel PAMP-triggered phosphorylation and dephosphorylation events in Arabidopsis thaliana by quantitative phosphoproteomic analysis.", "journal": "Journal of proteome research", "date": "2014-04-04", "authors": "Rayapuram Naganand, Bonhomme Ludovic, Bigeard Jean, Haddadou Kahina, Przybylski 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"MDMSVIMRYGDDKAEELCLEVEDYWARVDESDGFDVEGIQAPPGGTPLIHYDCHLPNSRHPDPVLVKLYASAGLHRYNMLEGTNFKLVDVMKFNKLMMHLSPFYITLLAQDPVSRSQQTFQVQVDEHCLSTMDLTVLIARPKAVSTNESVLAPQSFSVEESPEWPSDFNDGKRFYRVKESELRNNDWISLYLQLVLVSHDRMRISDSDLSKLKIVEAVIETKDDMLPPNERLLNAKTAIVYITFKGFTKCRIGDEHTERKTIVRRIFDEDTGHLSIKGELIGEYKLGGDFDPGCYFNSPAILEARRICQGLPPQPF", "length": 316, "header": "sp|Q9SRX1-1|Y1277_ARATH Isoform 1 of UPF0725 protein At1g02770 OS=Arabidopsis thaliana OX=3702 GN= PE=2 SV=1 CANONICAL=Q9SRX1-1" }, "locus": { "chromosome": "1", "start_pos": 604873, "end_pos": 606708, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT1G02770.1", "url": "https://www.ensemblgenomes.org/id/AT1G02770.1" }, { "database": "Ensembl Peptide", "id": "AT1G02770.1", "url": "https://www.ensemblgenomes.org/id/AT1G02770.1" } ] } } ], "glycosylation": [], "phosphorylation": [ { "start_pos": 221, "end_pos": 221, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Thr", "comment": "", "evidence": [ { 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Peterson J, Pham P K, Rizzo M, Rooney T, Rowley D, Sakano H, Salzberg S L, Schwartz J R, Shinn P, Southwick A M, Sun H, Tallon L J, Tambunga G, Toriumi M J, Town C D, Utterback T, Van Aken S, Vaysberg M, Vysotskaia V S, Walker M, Wu D, Yu G, Fraser C M, Venter J C, Davis R W", "evidence": [ { "database": "UniProtKB", "id": "Q9SRX1", "url": "https://www.uniprot.org/uniprotkb/Q9SRX1" } ], "reference": [ { "type": "PubMed", "id": "11130712", "url": "https://glygen.org/publication/PubMed/11130712" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9SRX1", "url": "https://www.uniprot.org/uniprotkb/Q9SRX1" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], 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"MGEQQISVTVPRDRTDEQAILALKKGAQLLKCRRRGNPKFCPFKLSMDEKYLIWYSGEEERQLRLSSVITIVRGQITPNFQKQAQSDRKEQSFSLIYANGEHTLDLICKDKAQADSWFKGLRAVITKHHNIRNSVNHRSSRGAQSCINSPAGFMRRKQNLGLLEETPDVTQIRSLCGSPSTLLEERCLSNGLSCSSDSFAESDALGPVSSYYETDYDFRNSDCDRSTGSELCRFSSQRFAASPPLSIITQPVTRSNVLKDIMIWGAITGLIDGSKNQNDALSPKLLESATMFDVQSISLGAKHAALVTRQGEVFCWGNGNSGKLGLKVNIDIDHPKRVESLEDVAVRSVACSDHQTCAVTESGELYLWGIDGGTIEQSGSQFLTRKISDVLGGSLTVLSVACGAWHTAIVTSSGQLFTYGSGTFGVLGHGSLESVTKPKEVESLRRMKVISVSCGPWHTAAIVETANDRKFYNAKSCGKLFTWGDGDKGRLGHADSKRKLVPTCVTELIDHDFIKVSCGWTLTVALSISGTVYTMGSSIHGQLGCPRAKDKSVNVVLGNLTRQFVKDIASGSHHVAVLTSFGNVYTWGKGMNGQLGLGDVRDRNSPVLVEPLGDRLVESIACGLNLTAAICLHKEISLNDQTACSSCKSAFGFTRRKHNCYNCGLLFCNACSSKKAVNASLAPNKSKLSRVCDSCFDHLWSITEFSRNVKMDNHTPRMQMVTRRVSEDLTEKQSENEMQNLPQANRSSDGQPRWGQVSGPSLFRFDKISTSSSLNLSVSARRTSSTKISTSSESNKILTEEIERLKAVIKNLQRQCELGNEKMEECQQELDKTWEVAKEEAEKSKAAKEIIKALASKLQANKEKPSNPLKTGIACNPSQVSPIFDDSMSIPYLTPITTARSQHETKQHVEKCVTKSSNRDSNIKLLVDASPAITRTGYLQNETQDSSAEQVEQYEPGVYITFTALPCGQKTLKRVRFSRKRFSEKEAQRWWEEKQVLVYNKYDAEI", "length": 1006, "header": "tr|Q9SRZ7-1|Q9SRZ7_ARATH Isoform 1 of Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SRZ7-1" }, "isoforms": [ { "isoform_ac": "A0A1P8AMH6-1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AMH6/entry", "sequence": { "sequence": "MDEKYLIWYSGEEERQLRLSSVITIVRGQITPNFQKQAQSDRKEQSFSLIYANGEHTLDLICKDKAQADSWFKGLRAVITKHHNIRNSVNHRSSRGAQSCINSPAGFMRRKQNLGLLEETPDVTQIRSLCGSPSTLLEERCLSNGLSCSSDSFAESDALGPVSSYYETDYDFRNSDCDRSTGSELCRFSSQRFAASPPLSIITQPVTRSNVLKDIMIWGAITGLIDGSKNQNDALSPKLLESATMFDVQSISLGAKHAALVTRQGEVFCWGNGNSGKLGLKVNIDIDHPKRVESLEDVAVRSVACSDHQTCAVTESGELYLWGIDGGTIEQSGSQFLTRKISDVLGGSLTVLSVACGAWHTAIVTSSGQLFTYGSGTFGVLGHGSLESVTKPKEVESLRRMKVISVSCGPWHTAAIVETANDRKFYNAKSCGKLFTWGDGDKGRLGHADSKRKLVPTCVTELIDHDFIKVSCGWTLTVALSISGTVYTMGSSIHGQLGCPRAKDKSVNVVLGNLTRQFVKDIASGSHHVAVLTSFGNVYTWGKGMNGQLGLGDVRDRNSPVLVEPLGDRLVESIACGLNLTAAICLHKEISLNDQTACSSCKSAFGFTRRKHNCYNCGLLFCNACSSKKAVNASLAPNKSKLSRVCDSCFDHLWSITEFSRNVKMDNHTPRMQMVTRRVSEDLTEKQSENEMQNLPQANRSSDGQPRWGQVSGPSLFRFDKISTSSSLNLSVSARRTSSTKISTSSESNKILTEEIERLKAVIKNLQRQCELGNEKMEECQQELDKTWEVAKEEAEKSKAAKEIIKALASKLQANKEKPSNPLKTGIACNPSQVSPIFDDSMSIPYLTPITTARSQHETKQHVEKCVTKSSNRDSNIKLLVDASPAITRTGYLQNETQDSSAEQVEQYEPGVYITFTALPCGQKTLKRVRFSRKRFSEKEAQRWWEEKQVLVYNKYDAEI", "length": 960, "header": "tr|A0A1P8AMH6-1|A0A1P8AMH6_ARATH Computationally mapped isoform of Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SRZ7-1" }, "locus": { "chromosome": "1", "start_pos": 24525102, "end_pos": 24529313, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT1G65920.2", "url": "https://www.ensemblgenomes.org/id/AT1G65920.2" }, { "database": "Ensembl Peptide", "id": "AT1G65920.2", "url": "https://www.ensemblgenomes.org/id/AT1G65920.2" } ] } }, { "isoform_ac": "Q9SRZ7-1", "url": "https://www.uniprot.org/uniprotkb/Q9SRZ7/entry", "sequence": { "sequence": "MGEQQISVTVPRDRTDEQAILALKKGAQLLKCRRRGNPKFCPFKLSMDEKYLIWYSGEEERQLRLSSVITIVRGQITPNFQKQAQSDRKEQSFSLIYANGEHTLDLICKDKAQADSWFKGLRAVITKHHNIRNSVNHRSSRGAQSCINSPAGFMRRKQNLGLLEETPDVTQIRSLCGSPSTLLEERCLSNGLSCSSDSFAESDALGPVSSYYETDYDFRNSDCDRSTGSELCRFSSQRFAASPPLSIITQPVTRSNVLKDIMIWGAITGLIDGSKNQNDALSPKLLESATMFDVQSISLGAKHAALVTRQGEVFCWGNGNSGKLGLKVNIDIDHPKRVESLEDVAVRSVACSDHQTCAVTESGELYLWGIDGGTIEQSGSQFLTRKISDVLGGSLTVLSVACGAWHTAIVTSSGQLFTYGSGTFGVLGHGSLESVTKPKEVESLRRMKVISVSCGPWHTAAIVETANDRKFYNAKSCGKLFTWGDGDKGRLGHADSKRKLVPTCVTELIDHDFIKVSCGWTLTVALSISGTVYTMGSSIHGQLGCPRAKDKSVNVVLGNLTRQFVKDIASGSHHVAVLTSFGNVYTWGKGMNGQLGLGDVRDRNSPVLVEPLGDRLVESIACGLNLTAAICLHKEISLNDQTACSSCKSAFGFTRRKHNCYNCGLLFCNACSSKKAVNASLAPNKSKLSRVCDSCFDHLWSITEFSRNVKMDNHTPRMQMVTRRVSEDLTEKQSENEMQNLPQANRSSDGQPRWGQVSGPSLFRFDKISTSSSLNLSVSARRTSSTKISTSSESNKILTEEIERLKAVIKNLQRQCELGNEKMEECQQELDKTWEVAKEEAEKSKAAKEIIKALASKLQANKEKPSNPLKTGIACNPSQVSPIFDDSMSIPYLTPITTARSQHETKQHVEKCVTKSSNRDSNIKLLVDASPAITRTGYLQNETQDSSAEQVEQYEPGVYITFTALPCGQKTLKRVRFSRKRFSEKEAQRWWEEKQVLVYNKYDAEI", "length": 1006, "header": "tr|Q9SRZ7-1|Q9SRZ7_ARATH Isoform 1 of Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SRZ7-1" }, "locus": { "chromosome": "1", "start_pos": 24525102, "end_pos": 24529362, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT1G65920.1", "url": "https://www.ensemblgenomes.org/id/AT1G65920.1" }, { "database": "Ensembl Peptide", "id": "AT1G65920.1", "url": "https://www.ensemblgenomes.org/id/AT1G65920.1" } ] } } ], "glycosylation": [], "phosphorylation": [ { "start_pos": 789, "end_pos": 789, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SRZ7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SRZ7" }, { "database": "PubMed", "id": "18463617", "url": "https://glygen.org/publication/PubMed/18463617" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" } ], "site_lbl": "Ser789" } ], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Theologis A, Ecker J R, Palm C J, Federspiel N A, Kaul S, White O, Alonso J, Altafi H, Araujo R, Bowman C L, Brooks S Y, Buehler E, Chan A, Chao Q, Chen H, Cheuk R F, Chin C W, Chung M K, Conn L, Conway A B, Conway A R, Creasy T H, Dewar K, Dunn P, Etgu P, Feldblyum T V, Feng J, Fong B, Fujii C Y, Gill J E, Goldsmith A D, Haas B, Hansen N F, Hughes B, Huizar L, Hunter J L, Jenkins J, Johnson-Hopson C, Khan S, Khaykin E, Kim C J, Koo H L, Kremenetskaia I, Kurtz D B, Kwan A, Lam B, Langin-Hooper S, Lee A, Lee J M, Lenz C A, Li J H, Li Y, Lin X, Liu S X, Liu Z A, Luros J S, Maiti R, Marziali A, Militscher J, Miranda M, Nguyen M, Nierman W C, Osborne B I, Pai G, Peterson J, Pham P K, Rizzo M, Rooney T, Rowley D, Sakano H, Salzberg S L, Schwartz J R, Shinn P, Southwick A M, Sun H, Tallon L J, Tambunga G, Toriumi M J, Town C D, Utterback T, Van Aken S, Vaysberg M, Vysotskaia V S, Walker M, Wu D, Yu G, Fraser C M, Venter J C, Davis R W", "evidence": [ { "database": "UniProtKB", "id": "Q9SRZ7", "url": "https://www.uniprot.org/uniprotkb/Q9SRZ7" } ], "reference": [ { "type": "PubMed", "id": "11130712", "url": "https://glygen.org/publication/PubMed/11130712" } ] }, { "title": "Large-scale phosphorylation mapping reveals the extent of tyrosine phosphorylation in Arabidopsis.", "journal": "Molecular systems biology", "date": "2008", "authors": "Sugiyama Naoyuki, Nakagami Hirofumi, Mochida Keiichi, Daudi Arsalan, Tomita Masaru, Shirasu Ken, Ishihama Yasushi", "evidence": [ { "database": "iPTMnet", "id": "Q9SRZ7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SRZ7" } ], "reference": [ { "type": "PubMed", "id": "18463617", "url": "https://glygen.org/publication/PubMed/18463617" } ] }, { "title": "Large-scale comparative phosphoproteomics identifies conserved phosphorylation sites in plants.", "journal": "Plant physiology", "date": "2010-07", "authors": "Nakagami Hirofumi, Sugiyama Naoyuki, Mochida Keiichi, Daudi Arsalan, Yoshida Yuko, Toyoda Tetsuro, Tomita Masaru, Ishihama Yasushi, Shirasu Ken", "evidence": [ { "database": "iPTMnet", "id": "Q9SRZ7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SRZ7" } ], "reference": [ { "type": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9SRZ7", "url": "https://www.uniprot.org/uniprotkb/Q9SRZ7" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT1G65920", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT1G65920", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "Golgi apparatus", "id": "GO:0005794", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005794", "evidence": [ { "database": "UniProtKB", "id": "Q9SRZ7", "url": "https://www.uniprot.org/uniprotkb/Q9SRZ7" } ], "pmid": "" }, { "name": "vacuole", "id": "GO:0005773", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005773", "evidence": [ { "database": "UniProtKB", "id": "Q9SRZ7", "url": "https://www.uniprot.org/uniprotkb/Q9SRZ7" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "zinc ion binding", "id": "GO:0008270", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008270", "evidence": [ { "database": "UniProtKB", "id": "Q9SRZ7", "url": 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and Pathway" ] }, { "id": "KWTQFLS", "url": "https://omabrowser.org/oma/group/KWTQFLS/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "Q9SRZ8", "url": "https://www.orthodb.org/?gene=Q9SRZ8", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR31744", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31744", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR31744:SF210", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31744:SF210", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF02365", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF02365", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_176766", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_176766", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT1G65910", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT1G65910", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9SRZ8", "url": "https://www.uniprot.org/uniprotkb/Q9SRZ8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9SRZ8-1", "url": "https://www.uniprot.org/uniprotkb/Q9SRZ8-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MAPVSMPPGFRFHPTDEELVIYYLKRKINGRTIELEIIPEIDLYKCEPWDLPGKSLLPSKDLEWFFFSPRDRKYPNGSRTNRATKAGYWKATGKDRKVTSHSRMVGTKKTLVYYRGRAPHGSRTDWVMHEYRLEEQECDSKSGIQDAYALCRVFKKSALANKIEEQHHGTKKNKGTTNSEQSTSSTCLYSDGMYENLENSGYPVSPETGGLTQLGNNSSSDMETIENKWSQFMSHDTSFNFPPQSQYGTISYPPSKVDIALECARLQNRMLPPVPPLYVEGLTHNEYFGNNVANDTDEMLSKIIALAQASHEPRNSLDSWDGGSASGNFHGDFNYSGEKVSCLEANVEAVDMQEHHVNFKEERLVENLRWVGVSSKELEKSFVEEHSTVIPIEDIWRYHNDNQEQEHHDQDGMDVNNNNGDVDDAFTLEFSENEHNENLLDKNDHETTSSSCFEVVKKVEVSHGLFVTTRQVTNTFFQQIVPSQTVIVYINPTDGNECCHSMTSKEEVHVRKKINPRINGVSSTVLGQWRKFAHVIGFIPMLLLMRCVHRGNSNKNRGSEGYSRQPTRGDCNNRGTILMMENAVVRRKIWKKKKEKNMVDEQGFRFQDSFVLKKLGLSLAIILAVSTISLI", "length": 631, "header": "tr|Q9SRZ8-1|Q9SRZ8_ARATH Isoform 1 of NAC domain containing protein 28 OS=Arabidopsis thaliana OX=3702 GN=NAC028 PE=4 SV=1 CANONICAL=Q9SRZ8-1" }, "isoforms": [ { "isoform_ac": "Q9SRZ8-1", "url": "https://www.uniprot.org/uniprotkb/Q9SRZ8/entry", "sequence": { "sequence": "MAPVSMPPGFRFHPTDEELVIYYLKRKINGRTIELEIIPEIDLYKCEPWDLPGKSLLPSKDLEWFFFSPRDRKYPNGSRTNRATKAGYWKATGKDRKVTSHSRMVGTKKTLVYYRGRAPHGSRTDWVMHEYRLEEQECDSKSGIQDAYALCRVFKKSALANKIEEQHHGTKKNKGTTNSEQSTSSTCLYSDGMYENLENSGYPVSPETGGLTQLGNNSSSDMETIENKWSQFMSHDTSFNFPPQSQYGTISYPPSKVDIALECARLQNRMLPPVPPLYVEGLTHNEYFGNNVANDTDEMLSKIIALAQASHEPRNSLDSWDGGSASGNFHGDFNYSGEKVSCLEANVEAVDMQEHHVNFKEERLVENLRWVGVSSKELEKSFVEEHSTVIPIEDIWRYHNDNQEQEHHDQDGMDVNNNNGDVDDAFTLEFSENEHNENLLDKNDHETTSSSCFEVVKKVEVSHGLFVTTRQVTNTFFQQIVPSQTVIVYINPTDGNECCHSMTSKEEVHVRKKINPRINGVSSTVLGQWRKFAHVIGFIPMLLLMRCVHRGNSNKNRGSEGYSRQPTRGDCNNRGTILMMENAVVRRKIWKKKKEKNMVDEQGFRFQDSFVLKKLGLSLAIILAVSTISLI", "length": 631, "header": "tr|Q9SRZ8-1|Q9SRZ8_ARATH Isoform 1 of NAC domain containing protein 28 OS=Arabidopsis thaliana OX=3702 GN=NAC028 PE=4 SV=1 CANONICAL=Q9SRZ8-1" }, "locus": { "chromosome": "1", "start_pos": 24520668, "end_pos": 24524260, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT1G65910.1", "url": "https://www.ensemblgenomes.org/id/AT1G65910.1" }, { "database": "Ensembl Peptide", "id": "AT1G65910.1", "url": "https://www.ensemblgenomes.org/id/AT1G65910.1" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "other", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 493, "start_aa": "Thr", "end_pos": 493, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr493", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ], "filter_code": "000000000000000010000.00000000001000.0.01000" } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Theologis A, Ecker J R, Palm C J, Federspiel N A, Kaul S, White O, Alonso J, Altafi H, Araujo R, Bowman C L, Brooks S Y, Buehler E, Chan A, Chao Q, Chen H, Cheuk R F, Chin C W, Chung M K, Conn L, Conway A B, Conway A R, Creasy T H, Dewar K, Dunn P, Etgu P, Feldblyum T V, Feng J, Fong B, Fujii C Y, Gill J E, Goldsmith A D, Haas B, Hansen N F, Hughes B, Huizar L, Hunter J L, Jenkins J, Johnson-Hopson C, Khan S, Khaykin E, Kim C J, Koo H L, Kremenetskaia I, Kurtz D B, Kwan A, Lam B, Langin-Hooper S, Lee A, Lee J M, Lenz C A, Li J H, Li Y, Lin X, Liu S X, Liu Z A, Luros J S, Maiti R, Marziali A, Militscher J, Miranda M, Nguyen M, Nierman W C, Osborne B I, Pai G, Peterson J, Pham P K, Rizzo M, Rooney T, Rowley D, Sakano H, Salzberg S L, Schwartz J R, Shinn P, Southwick A M, Sun H, Tallon L J, Tambunga G, Toriumi M J, Town C D, Utterback T, Van Aken S, Vaysberg M, Vysotskaia V S, Walker M, Wu D, Yu G, Fraser C M, Venter J C, Davis R W", "evidence": [ { "database": "UniProtKB", "id": "Q9SRZ8", "url": "https://www.uniprot.org/uniprotkb/Q9SRZ8" } ], "reference": [ { "type": "PubMed", "id": "11130712", "url": "https://glygen.org/publication/PubMed/11130712" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9SRZ8", "url": "https://www.uniprot.org/uniprotkb/Q9SRZ8" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT1G65910", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT1G65910", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "DNA binding", "id": 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"https://www.uniprot.org/uniprotkb/Q9SRZ8" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 216, "end_pos": 218, "annotation": "n_glycosylation_sequon" }, { "start_pos": 217, "end_pos": 219, "annotation": "n_glycosylation_sequon" }, { "start_pos": 294, "end_pos": 296, "annotation": "n_glycosylation_sequon" }, { "start_pos": 334, "end_pos": 336, "annotation": "n_glycosylation_sequon" }, { "start_pos": 76, "end_pos": 78, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "Q9SRZ8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SRZ8" }, { "id": "PS51005", "database": "PROSITE", "url": "https://prosite.expasy.org/PS51005" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "NAC", "eco_id": "ECO_0000259", "start_pos": 6, "end_pos": 156, "start_aa": "Met", "end_aa": "Lys", "glycosite_overlap": [] } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [ 493 ], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 216, "end_pos": 218 }, { "start_pos": 217, "end_pos": 219 }, { "start_pos": 294, "end_pos": 296 }, { "start_pos": 334, "end_pos": 336 }, { "start_pos": 76, "end_pos": 78 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 1 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 1 }, { "field": "exact_o_linked_sites", "count": 1 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": 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"total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "Q9SS33-1", "uniprot_ac": "Q9SS33", "uniprot_id": "Q9SS33_ARATH", "mass": { "chemical_mass": 27537.0, "monoisotopic_mass": 27537.0 }, "refseq": { "ac": "NP_566369", "name": "SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_566369" }, "gene_names": [], "protein_names": [ { "name": "SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein", "type": "synonym", "evidence": [ { "id": "NP_566369", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_566369" }, { "id": "Q9SS33", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SS33/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9SS33", "url": "https://www.uniprot.org/uniprotkb/Q9SS33" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9SS33", "locus": {} } ], "crossref": [ { "id": "820183", "url": "https://www.ncbi.nlm.nih.gov/gene/820183", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR001251", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001251", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036865", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036865", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT3G10210", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G10210", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "EGPYCIV", "url": "https://omabrowser.org/oma/group/EGPYCIV/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "Q9SS33", "url": "https://www.orthodb.org/?gene=Q9SS33", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR48411", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR48411", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR48411:SF1", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR48411:SF1", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF13716", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF13716", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_566369", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_566369", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G10210", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G10210", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9SS33", "url": "https://www.uniprot.org/uniprotkb/Q9SS33", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9SS33-1", "url": "https://www.uniprot.org/uniprotkb/Q9SS33-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MAEDFSVVVLASDLGIDARPFLTRSDDVDEQENWHDCPQYLGDEDFSDLDLLQFFTLQGLDRSGNRIFRIVGKYFPARVVSAERLKKYISQKISNQCPEGPLCLVYMHSTVQKDDNSPGITILRWIYEDLPSDIKDRLQLVYFIHPGLRSRLVIATLGRLLLSGGLYWKIKYVSRLQYLWEDIKKGEVEIPDFVKNHDNVLEHRPLTDYGIEPDPFQLSEVQSSSFSLNRYENRWVS", "length": 237, "header": "tr|Q9SS33-1|Q9SS33_ARATH Isoform 1 of SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SS33-1" }, "isoforms": [ { "isoform_ac": "Q9SS33-1", "url": 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chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, 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] }, { "id": "IPR001810", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001810", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR013187", "url": "https://www.ebi.ac.uk/interpro/entry/IPR013187", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR017451", "url": "https://www.ebi.ac.uk/interpro/entry/IPR017451", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036047", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036047", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT3G10240", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G10240", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "CFESENP", "url": "https://omabrowser.org/oma/group/CFESENP/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR31111", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31111", 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H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9SS35", "url": "https://www.uniprot.org/uniprotkb/Q9SS35" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Nitrate and ammonium lead to distinct global dynamic phosphorylation patterns when resupplied to nitrogen-starved Arabidopsis seedlings.", "journal": "The Plant journal : for cell and molecular biology", "date": "2012-03", "authors": "Engelsberger Wolfgang R, Schulze Waltraud X", "evidence": [ { "database": 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"id": "AT3G09130.1", "url": "https://www.ensemblgenomes.org/id/AT3G09130.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, 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"reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9SS74", "url": "https://www.uniprot.org/uniprotkb/Q9SS74" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G09130", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G09130", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "chloroplast", "id": "GO:0009507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009507", "evidence": [ { "database": 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}, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { 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"monoisotopic_mass": 77901.0 }, "refseq": { "ac": "NP_001319507", "name": "Pentatricopeptide repeat (PPR) superfamily protein", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001319507" }, "gene_names": [ { "name": "MZB10.9", "type": "synonym", "evidence": [ { "id": "Q9SS81", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SS81" } ] } ], "protein_names": [ { "name": "Pentatricopeptide repeat-containing protein At3g09060", "type": "recommended", "evidence": [ { "id": "Q9SS81", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SS81/entry#names_and_taxonomy" } ] }, { "name": "Pentatricopeptide repeat (PPR) superfamily protein", "type": "synonym", "evidence": [ { "id": "NP_001319507", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001319507" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9SS81", "url": "https://www.uniprot.org/uniprotkb/Q9SS81" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9SS81", "locus": {} } ], "crossref": [ { "id": "Q9SS81", "url": "https://alphafold.ebi.ac.uk/entry/Q9SS81", "database": "AlphaFoldDB", "categories": [] }, { "id": "AT3G09060", "url": "https://bar.utoronto.ca/thalemine/portal.do?externalids=AT3G09060", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "820059", "url": "https://www.ncbi.nlm.nih.gov/gene/820059", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR002885", "url": "https://www.ebi.ac.uk/interpro/entry/IPR002885", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR011990", "url": "https://www.ebi.ac.uk/interpro/entry/IPR011990", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR033443", "url": "https://www.ebi.ac.uk/interpro/entry/IPR033443", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT3G09060", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G09060", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "DMALNLW", "url": "https://omabrowser.org/oma/group/DMALNLW/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR47447", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR47447", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR47447:SF28", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR47447:SF28", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF01535", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF01535", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF12854", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF12854", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF13041", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF13041", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF17177", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF17177", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PR:Q9SS81", "url": "https://proconsortium.org/cgi-bin/entry_pro?id=PR:Q9SS81", "database": "PRO", "categories": [ "Protein" ] }, { "id": "NP_001319507", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001319507", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G09060", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G09060", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9SS81", "url": "https://www.uniprot.org/uniprotkb/Q9SS81", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9SS81-1", "url": "https://www.uniprot.org/uniprotkb/Q9SS81-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MVVFPKSLSPKHVLKLLKSEKNPRAAFALFDSATRHPGYAHSAVVYHHILRRLSETRMVNHVSRIVELIRSQECKCDEDVALSVIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFPTVYTWNILVRAVVNR", "length": 687, "header": "sp|Q9SS81-1|PP221_ARATH Isoform 1 of Pentatricopeptide repeat-containing protein At3g09060 OS=Arabidopsis thaliana OX=3702 GN= PE=2 SV=1 CANONICAL=Q9SS81-1" }, "isoforms": [ { "isoform_ac": "Q9SS81-1", "url": "https://www.uniprot.org/uniprotkb/Q9SS81/entry#Q9SS81-1", "sequence": { "sequence": "MVVFPKSLSPKHVLKLLKSEKNPRAAFALFDSATRHPGYAHSAVVYHHILRRLSETRMVNHVSRIVELIRSQECKCDEDVALSVIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFPTVYTWNILVRAVVNR", "length": 687, "header": "sp|Q9SS81-1|PP221_ARATH Isoform 1 of Pentatricopeptide repeat-containing protein At3g09060 OS=Arabidopsis thaliana OX=3702 GN= PE=2 SV=1 CANONICAL=Q9SS81-1" }, "locus": { "chromosome": "3", "start_pos": 2765812, "end_pos": 2768499, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G09060.1", "url": "https://www.ensemblgenomes.org/id/AT3G09060.1" }, { "database": "Ensembl Peptide", "id": "AT3G09060.1", "url": "https://www.ensemblgenomes.org/id/AT3G09060.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, 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"https://www.uniprot.org/uniprotkb/Q9SS89", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9SS89-1", "url": "https://www.uniprot.org/uniprotkb/Q9SS89-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MDSLRFNLQQSPFQLKPRILRPRITNISNRIDETDPRPSSSAGRIQRLVLNNEGRTKLNADPDREFYSYPRFVNHVDDSFISSLTELYRNRLRPGSTVLDLMSSWVSHLPEEVKYEKVVGHGLNAQELARNPRLDYFFVKDLNEDQKFEFEDKYFDAVLCSVGVQYLQQPEKVFAEVYRVLKPGGVLIVSFSNRMFYEKAIRVWRDGTEYSRIQLVVQYFQSIEGFTQPEIIRQQPGAQISVLTRLMGFIGLASTPDPFNAVIAYKNFKPIYE", "length": 273, "header": "tr|Q9SS89-1|Q9SS89_ARATH Isoform 1 of S-adenosyl-L-methionine-dependent methyltransferases superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SS89-1" }, "isoforms": [ { "isoform_ac": "Q9SS89-1", "url": "https://www.uniprot.org/uniprotkb/Q9SS89/entry", "sequence": { "sequence": "MDSLRFNLQQSPFQLKPRILRPRITNISNRIDETDPRPSSSAGRIQRLVLNNEGRTKLNADPDREFYSYPRFVNHVDDSFISSLTELYRNRLRPGSTVLDLMSSWVSHLPEEVKYEKVVGHGLNAQELARNPRLDYFFVKDLNEDQKFEFEDKYFDAVLCSVGVQYLQQPEKVFAEVYRVLKPGGVLIVSFSNRMFYEKAIRVWRDGTEYSRIQLVVQYFQSIEGFTQPEIIRQQPGAQISVLTRLMGFIGLASTPDPFNAVIAYKNFKPIYE", "length": 273, "header": "tr|Q9SS89-1|Q9SS89_ARATH Isoform 1 of S-adenosyl-L-methionine-dependent methyltransferases superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SS89-1" }, "locus": { "chromosome": "3", "start_pos": 245416, "end_pos": 246854, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G01660.1", "url": "https://www.ensemblgenomes.org/id/AT3G01660.1" }, { "database": "Ensembl Peptide", "id": "AT3G01660.1", "url": "https://www.ensemblgenomes.org/id/AT3G01660.1" } ] } } ], "glycosylation": [], "phosphorylation": [ { "start_pos": 41, "end_pos": 41, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SS89", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SS89" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ], "site_lbl": "Ser41" } ], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9SS89", "url": "https://www.uniprot.org/uniprotkb/Q9SS89" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Quantitative phosphoproteomics of the ataxia telangiectasia-mutated (ATM) and ataxia telangiectasia-mutated and rad3-related (ATR) dependent DNA damage response in Arabidopsis thaliana.", "journal": "Molecular & cellular proteomics : MCP", "date": "2015-03", "authors": "Roitinger Elisabeth, Hofer Manuel, K\u00f6cher Thomas, Pichler Peter, Novatchkova Maria, Yang Jianhua, Schl\u00f6gelhofer Peter, Mechtler Karl", "evidence": [ { "database": "iPTMnet", "id": "Q9SS89", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SS89" } ], "reference": [ { "type": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9SS89", "url": "https://www.uniprot.org/uniprotkb/Q9SS89" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G01660", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G01660", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "S-adenosylmethionine-dependent methyltransferase activity", "id": "GO:0008757", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008757", "evidence": [ { "database": "UniProtKB", "id": "Q9SS89", "url": "https://www.uniprot.org/uniprotkb/Q9SS89" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "methylation", "id": "GO:0032259", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0032259", "evidence": [ { "database": "UniProtKB", "id": "Q9SS89", "url": "https://www.uniprot.org/uniprotkb/Q9SS89" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 26, "end_pos": 28, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "Q9SS89", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SS89" }, { "id": "PF08241", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF08241" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Methyltransferase type 11", "eco_id": "ECO_0000259", "start_pos": 146, "end_pos": 189, "start_aa": "Gln", "end_aa": "Val", "glycosite_overlap": [] } ], "binding_sites": [], 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Classification" ] }, { "id": "PTHR21576:SF82", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR21576:SF82", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF06813", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF06813", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF23262", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF23262", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "AT3G01630", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G01630", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "F4J4R8", "url": "https://www.uniprot.org/uniprotkb/F4J4R8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F4J4R8-1", "url": "https://www.uniprot.org/uniprotkb/F4J4R8-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9SS92", "url": "https://www.uniprot.org/uniprotkb/Q9SS92", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9SS92-1", "url": "https://www.uniprot.org/uniprotkb/Q9SS92-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MKPPKTLTTTTAEEEETTMRKQPPSPPKPPRVNSMLQWWRRWTVLVAAIWIQAFTGTNFDFSAYSSDMKSSMGVSQSRLNYMAVASDLGKALGWSSGFAIAYFPVSGVLFAAAAMGLVGYGVQWLSIADVIDLPYSLVLVCCSLAGLSICWFNTVSFILCIRHFKANHSLALSLVVSFNGISAALYTLGHEAISGKSSASSDIYLLLNSLIPLIVSVLALWPVLTNPNSSETDTTRTHDETRIFVVFNVLALVTCFYLLLPSSGTYLASSPRWHFLGAIFLLLFPLCVPFLDYIHRALESCFHHHSSGYAAVNIEEPKILKIKSQKSNAEEESDQVRLGDEHSLGMLVRKLEFWLYYVAYFCGGTIGLVYSNNLGQIAQSLGQSSSNAKSLVTLFSAFSFLGRLLSSAPDFTRKKLKYLTRTGWFTISLLPTPLAFFILAYSPKTNQTALLEVATALIGLSSGFVFAAAVSITSELFGRNSVGVNQNILITNIPIGSLFYGYMAGSVYDTNASLGRKSVVADSVVCVGRKCYFVTFLFWGCLSVLGFVCSLFLFIRTRPVYHRLKLNRM", "length": 569, "header": "tr|Q9SS92-1|Q9SS92_ARATH Isoform 1 of Major facilitator superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SS92-1" }, "isoforms": [ { "isoform_ac": "F4J4R8-1", "url": "https://www.uniprot.org/uniprotkb/F4J4R8/entry", "sequence": { "sequence": "MRKQPPSPPKPPRVNSMLQWWRRWTVLVAAIWIQAFTGTNFDFSAYSSDMKSSMGVSQSRLNYMAVASDLGKALGWSSGFAIAYFPVSGVLFAAAAMGLVGYGVQWLSIADVIDLPYSLVLVCCSLAGLSICWFNTVSFILCIRHFKANHSLALSLVVSFNGISAALYTLGHEAISGKSSASSDIYLLLNSLIPLIVSVLALWPVLTNPNSSETDTTRTHDETRIFVVFNVLALVTCFYLLLPSSGTYLASSPRWHFLGAIFLLLFPLCVPFLDYIHRALESCFHHHSSGYAAVNIEEPKILKIKSQKSNAEEESDQVRLGDEHSLGMLVRKLEFWLYYVAYFCGGTIGLVYSNNLGQIAQSLGQSSSNAKSLVTLFSAFSFLGRLLSSAPDFTRKKLKYLTRTGWFTISLLPTPLAFFILAYSPKTNQTALLEVATALIGLSSGFVFAAAVSITSELFGRNSVGVNQNILITNIPIGSLFYGYMAGSVYDTNASLGRKSVVADSVVCVGRKCYFVTFLFWGCLSVLGFVCSLFLFIRTRPVYHRLKLNRM", "length": 551, "header": "tr|F4J4R8-1|F4J4R8_ARATH Computationally mapped isoform of Major facilitator superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9SS92-1" }, "locus": { "chromosome": "3", "start_pos": 237239, "end_pos": 239113, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G01630.1", "url": "https://www.ensemblgenomes.org/id/AT3G01630.1" }, { "database": "Ensembl Peptide", "id": "AT3G01630.1", "url": "https://www.ensemblgenomes.org/id/AT3G01630.1" } ] } }, { "isoform_ac": "Q9SS92-1", "url": "https://www.uniprot.org/uniprotkb/Q9SS92/entry", "sequence": { "sequence": "MKPPKTLTTTTAEEEETTMRKQPPSPPKPPRVNSMLQWWRRWTVLVAAIWIQAFTGTNFDFSAYSSDMKSSMGVSQSRLNYMAVASDLGKALGWSSGFAIAYFPVSGVLFAAAAMGLVGYGVQWLSIADVIDLPYSLVLVCCSLAGLSICWFNTVSFILCIRHFKANHSLALSLVVSFNGISAALYTLGHEAISGKSSASSDIYLLLNSLIPLIVSVLALWPVLTNPNSSETDTTRTHDETRIFVVFNVLALVTCFYLLLPSSGTYLASSPRWHFLGAIFLLLFPLCVPFLDYIHRALESCFHHHSSGYAAVNIEEPKILKIKSQKSNAEEESDQVRLGDEHSLGMLVRKLEFWLYYVAYFCGGTIGLVYSNNLGQIAQSLGQSSSNAKSLVTLFSAFSFLGRLLSSAPDFTRKKLKYLTRTGWFTISLLPTPLAFFILAYSPKTNQTALLEVATALIGLSSGFVFAAAVSITSELFGRNSVGVNQNILITNIPIGSLFYGYMAGSVYDTNASLGRKSVVADSVVCVGRKCYFVTFLFWGCLSVLGFVCSLFLFIRTRPVYHRLKLNRM", "length": 569, "header": "tr|Q9SS92-1|Q9SS92_ARATH Isoform 1 of Major facilitator superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SS92-1" }, "locus": { "chromosome": "3", "start_pos": 237119, "end_pos": 239113, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G01630.2", "url": "https://www.ensemblgenomes.org/id/AT3G01630.2" }, { "database": "Ensembl Peptide", "id": "AT3G01630.2", "url": "https://www.ensemblgenomes.org/id/AT3G01630.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9SS92", "url": "https://www.uniprot.org/uniprotkb/Q9SS92" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9SS92", "url": "https://www.uniprot.org/uniprotkb/Q9SS92" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G01630", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G01630", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "Q9SS92", "url": "https://www.uniprot.org/uniprotkb/Q9SS92" } ], "pmid": "" }, { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "Q9SS92", "url": "https://www.uniprot.org/uniprotkb/Q9SS92" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 167, "end_pos": 169, "annotation": "n_glycosylation_sequon" }, { "start_pos": 228, "end_pos": 230, "annotation": "n_glycosylation_sequon" }, { "start_pos": 446, "end_pos": 448, "annotation": "n_glycosylation_sequon" }, { "start_pos": 511, "end_pos": 513, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "Q9SS92", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SS92" }, { "id": "PF23262", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF23262" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "NFD4 C-terminal", "eco_id": "ECO_0000259", "start_pos": 341, "end_pos": 561, "start_aa": "Glu", "end_aa": "Tyr", "glycosite_overlap": [] }, { "evidence": [ { "id": "Q9SS92", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SS92" }, { "id": "PF06813", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF06813" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Nodulin-like", "eco_id": "ECO_0000259", "start_pos": 41, "end_pos": 290, "start_aa": "Arg", "end_aa": "Phe", "glycosite_overlap": [] } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 167, "end_pos": 169 }, { "start_pos": 228, "end_pos": 230 }, { "start_pos": 446, "end_pos": 448 }, { "start_pos": 511, "end_pos": 513 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "Q9SS93-1", "uniprot_ac": "Q9SS93", "uniprot_id": "Q9SS93_ARATH", "mass": { "chemical_mass": 45319.0, "monoisotopic_mass": 45319.0 }, "refseq": {}, "gene_names": [ { "name": "F4P13.16", "type": "synonym", "evidence": [ { "id": "Q9SS93", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SS93" } ] }, { "name": "F4P13_16", "type": "synonym", "evidence": [ { "id": "Q9SS93", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SS93" } ] } ], "protein_names": [ { "name": "Beta-1,4-N-acetylglucosaminyltransferase family protein", "type": "synonym", "evidence": [ { "id": "Q9SS93", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SS93/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9SS93", "url": "https://www.uniprot.org/uniprotkb/Q9SS93" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9SS93", "locus": {} } ], "crossref": [ { "id": "AT3G01620", "url": "https://bar.utoronto.ca/thalemine/portal.do?externalids=AT3G01620", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "821102", "url": "https://www.ncbi.nlm.nih.gov/gene/821102", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR006813", "url": "https://www.ebi.ac.uk/interpro/entry/IPR006813", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT3G01620", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G01620", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "CDGFPPI", "url": "https://omabrowser.org/oma/group/CDGFPPI/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR12224", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12224", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR12224:SF12", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12224:SF12", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF04724", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF04724", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "AT3G01620", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G01620", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9SS93", "url": "https://www.uniprot.org/uniprotkb/Q9SS93", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9SS93-1", "url": "https://www.uniprot.org/uniprotkb/Q9SS93-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MSDGYRSSKKTDTICEDVCGQEGSRAGKAISRLRCVLRGLDFKTFLFLFTLLPLFIFGIYLHGQKITYFLRPLWESPPKPFNILPHYYHENTSMELLCNLHGWKLRESPRRVFDAALFSNEIDMLTLRWNELNPYITQFVLLESNSTFTGLSKQLAFADNREKNFKFVEPRLTYGNVGGRFKKGENPFVEESFQRLALDQLIKLAGIKEDDLLIMSDVDEIPSGHTINLLRWCDGFPPILHLQLRNYLYSYEYYVDSKSWRASVHLYKPGKTRCAHFRQSNNLLTDSGWHCSFCFRHINDFVFKMKAYSHTDRVRFLHYLNPRRIQDIICKGTDLFDMLPEEHTFREIIGKLGPIPRSYSAVHLPGYLIQNADSYKYLLPGNCKRESG", "length": 388, "header": "tr|Q9SS93-1|Q9SS93_ARATH Isoform 1 of Beta-1,4-N-acetylglucosaminyltransferase family protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SS93-1" }, "isoforms": [ { "isoform_ac": "Q9SS93-1", "url": "https://www.uniprot.org/uniprotkb/Q9SS93/entry", "sequence": { "sequence": "MSDGYRSSKKTDTICEDVCGQEGSRAGKAISRLRCVLRGLDFKTFLFLFTLLPLFIFGIYLHGQKITYFLRPLWESPPKPFNILPHYYHENTSMELLCNLHGWKLRESPRRVFDAALFSNEIDMLTLRWNELNPYITQFVLLESNSTFTGLSKQLAFADNREKNFKFVEPRLTYGNVGGRFKKGENPFVEESFQRLALDQLIKLAGIKEDDLLIMSDVDEIPSGHTINLLRWCDGFPPILHLQLRNYLYSYEYYVDSKSWRASVHLYKPGKTRCAHFRQSNNLLTDSGWHCSFCFRHINDFVFKMKAYSHTDRVRFLHYLNPRRIQDIICKGTDLFDMLPEEHTFREIIGKLGPIPRSYSAVHLPGYLIQNADSYKYLLPGNCKRESG", "length": 388, "header": "tr|Q9SS93-1|Q9SS93_ARATH Isoform 1 of Beta-1,4-N-acetylglucosaminyltransferase family protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SS93-1" }, "locus": { "chromosome": "3", "start_pos": 235197, "end_pos": 236968, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G01620.1", "url": "https://www.ensemblgenomes.org/id/AT3G01620.1" }, { "database": "Ensembl Peptide", "id": "AT3G01620.1", "url": "https://www.ensemblgenomes.org/id/AT3G01620.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], 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{ "id": "A0A1P8AP84", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AP84", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A1P8AP84-1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AP84-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F4HQF8", "url": "https://www.uniprot.org/uniprotkb/F4HQF8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F4HQF8-1", "url": "https://www.uniprot.org/uniprotkb/F4HQF8-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F4HQF9", "url": "https://www.uniprot.org/uniprotkb/F4HQF9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F4HQF9-1", "url": "https://www.uniprot.org/uniprotkb/F4HQF9-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9SSD3", "url": "https://www.uniprot.org/uniprotkb/Q9SSD3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9SSD3-1", "url": "https://www.uniprot.org/uniprotkb/Q9SSD3-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MSAVYCGTKRSYFDDNSSPPSSKRFRCFSPSNSPIWSSPPSSSLDQLHSAFPHIELTVLVKALEDNGSDFNAAMKSLYSFASSEEKKAEELAAGGAATQETDAVCGGNPPTSGDDWVELLVREVLQSSGTDDAKVRAARVLEALEKMLSARAREEAGNKFQEEKVAVQQQVETLVKDNTVLKRAVAIQHERQKALEDANHQLGLLKQLVPQYQEKLRNLEVNNYALRMQLQQVEHGNSMPARFNPDVF", "length": 248, "header": "tr|Q9SSD3-1|Q9SSD3_ARATH Isoform 1 of Ubiquitin system component Cue OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SSD3-1" }, "isoforms": [ { "isoform_ac": "A0A1P8AP84-1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AP84/entry", "sequence": { "sequence": "MKSLYSFASSEEKKAEELAAGGAATQETDAVCGGNPPTSGDDWVELLVREVLQSSGTDDAKVRAARVLEALEKMLSARAREEAGNKFQEEKVAVQQQVETLVKDNTVLKRAVAIQHERQKALEDANHQLGLLKQLVPQYQEKLRNLEVNNYALRMQLQQVEHGNSMPARFNPDVF", "length": 175, "header": "tr|A0A1P8AP84-1|A0A1P8AP84_ARATH Computationally mapped isoform of Ubiquitin system component Cue OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SSD3-1" }, "locus": { "chromosome": "1", "start_pos": 30109059, "end_pos": 30111284, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT1G80040.4", "url": "https://www.ensemblgenomes.org/id/AT1G80040.4" }, { "database": "Ensembl Peptide", "id": "AT1G80040.4", "url": "https://www.ensemblgenomes.org/id/AT1G80040.4" } ] } }, { "isoform_ac": "F4HQF8-1", "url": "https://www.uniprot.org/uniprotkb/F4HQF8/entry", "sequence": { "sequence": "MSAVYCGTKRSYFDDNSSPPSSKRFRCFSPSNSPIWSSPPSSSLDQLHSAFPHIELTVASKIHVSVAQVLVKALEDNGSDFNAAMKSLYSFASSEEKKAEELAAGGAATQETDAVCGGNPPTSGDDWVELLVREVLQSSGTDDAKVRAARVLEALEKMLSARAREEAGNKFQEVHTLVTDYKFVGSKHNYV", "length": 191, "header": "tr|F4HQF8-1|F4HQF8_ARATH Computationally mapped isoform of Ubiquitin system component Cue OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=2 CANONICAL=Q9SSD3-1" }, "locus": { "chromosome": "1", "start_pos": 30109147, "end_pos": 30111280, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT1G80040.3", "url": "https://www.ensemblgenomes.org/id/AT1G80040.3" }, { "database": "Ensembl Peptide", "id": "AT1G80040.3", "url": "https://www.ensemblgenomes.org/id/AT1G80040.3" } ] } }, { "isoform_ac": "F4HQF9-1", "url": "https://www.uniprot.org/uniprotkb/F4HQF9/entry", "sequence": { "sequence": "MSAVYCGTKRSYFDDNSSPPSSKRFRCFSPSNSPIWSSPPSSSLDQLHSAFPHIELTVLVKALEDNGSDFNAAMKSLYSFASSEEKKAEELAAGGAATQETDAVCGGNPPTSGDDWVELLVREVLQSSGTDDAKVRAARVLEALEKMLSARAREEAGNKFQEVHTLVTDYKFVGSKHNYV", "length": 180, "header": "tr|F4HQF9-1|F4HQF9_ARATH Computationally mapped isoform of Ubiquitin system component Cue OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SSD3-1" }, "locus": { "chromosome": "1", "start_pos": 30109147, "end_pos": 30111270, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT1G80040.2", "url": "https://www.ensemblgenomes.org/id/AT1G80040.2" }, { "database": "Ensembl Peptide", "id": "AT1G80040.2", "url": "https://www.ensemblgenomes.org/id/AT1G80040.2" } ] } }, { "isoform_ac": "Q9SSD3-1", "url": "https://www.uniprot.org/uniprotkb/Q9SSD3/entry", "sequence": { "sequence": "MSAVYCGTKRSYFDDNSSPPSSKRFRCFSPSNSPIWSSPPSSSLDQLHSAFPHIELTVLVKALEDNGSDFNAAMKSLYSFASSEEKKAEELAAGGAATQETDAVCGGNPPTSGDDWVELLVREVLQSSGTDDAKVRAARVLEALEKMLSARAREEAGNKFQEEKVAVQQQVETLVKDNTVLKRAVAIQHERQKALEDANHQLGLLKQLVPQYQEKLRNLEVNNYALRMQLQQVEHGNSMPARFNPDVF", "length": 248, "header": "tr|Q9SSD3-1|Q9SSD3_ARATH Isoform 1 of Ubiquitin system component Cue OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SSD3-1" }, "locus": { "chromosome": "1", "start_pos": 30109059, "end_pos": 30111284, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT1G80040.1", "url": "https://www.ensemblgenomes.org/id/AT1G80040.1" }, { "database": "Ensembl Peptide", "id": "AT1G80040.1", "url": "https://www.ensemblgenomes.org/id/AT1G80040.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Theologis A, Ecker J R, Palm C J, Federspiel N A, Kaul S, White O, Alonso J, Altafi H, Araujo R, Bowman C L, Brooks S Y, Buehler E, Chan A, Chao Q, Chen H, Cheuk R F, Chin C W, Chung M K, Conn L, Conway A B, Conway A R, Creasy T H, Dewar K, Dunn P, Etgu P, Feldblyum T V, Feng J, Fong B, Fujii C Y, Gill J E, Goldsmith A D, Haas B, Hansen N F, Hughes B, Huizar L, Hunter J L, Jenkins J, Johnson-Hopson C, Khan S, Khaykin E, Kim C J, Koo H L, Kremenetskaia I, Kurtz D B, Kwan A, Lam B, Langin-Hooper S, Lee A, Lee J M, Lenz C A, Li J H, Li Y, Lin X, Liu S X, Liu Z A, Luros J S, Maiti R, Marziali A, Militscher J, Miranda M, Nguyen M, Nierman W C, Osborne B I, Pai G, Peterson J, Pham P K, Rizzo M, Rooney T, Rowley D, Sakano H, Salzberg S L, Schwartz J R, Shinn P, Southwick A M, Sun H, Tallon L J, Tambunga G, Toriumi M J, Town C D, Utterback T, Van Aken S, Vaysberg M, Vysotskaia V S, Walker M, Wu D, Yu G, Fraser C M, Venter J C, Davis R W", "evidence": [ { "database": "UniProtKB", "id": "Q9SSD3", "url": "https://www.uniprot.org/uniprotkb/Q9SSD3" } ], "reference": [ { "type": "PubMed", "id": "11130712", "url": "https://glygen.org/publication/PubMed/11130712" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9SSD3", "url": "https://www.uniprot.org/uniprotkb/Q9SSD3" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT1G80040", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT1G80040", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q9SSD3", "url": "https://www.uniprot.org/uniprotkb/Q9SSD3" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "ubiquitin binding", "id": "GO:0043130", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0043130", "evidence": [ { "database": "UniProtKB", "id": "Q9SSD3", "url": "https://www.uniprot.org/uniprotkb/Q9SSD3" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 16, "end_pos": 18, "annotation": "n_glycosylation_sequon" }, { "start_pos": 66, "end_pos": 68, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "Q9SSD3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SSD3" }, { "id": "PF02845", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF02845" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "CUE", "eco_id": "ECO_0000259", "start_pos": 42, "end_pos": 75, "start_aa": "Ser", "end_aa": "Lys", "glycosite_overlap": [] } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 16, "end_pos": 18 }, { "start_pos": 66, "end_pos": 68 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": 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"o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "Q9SSG2-1", "uniprot_ac": "Q9SSG2", "uniprot_id": "Q9SSG2_ARATH", "mass": { "chemical_mass": 57615.0, "monoisotopic_mass": 57615.0 }, "refseq": {}, "gene_names": [ { "name": "F25A4.25", "type": "synonym", "evidence": [ { "id": "Q9SSG2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SSG2" } ] }, { "name": "F25A4_25", "type": "synonym", "evidence": [ { "id": "Q9SSG2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SSG2" } ] } ], "protein_names": [ { "name": "Nodulin-like / Major Facilitator Superfamily protein", "type": "synonym", "evidence": [ { "id": "Q9SSG2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SSG2/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9SSG2", "url": "https://www.uniprot.org/uniprotkb/Q9SSG2" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9SSG2", "locus": {} } ], "crossref": [ { "id": "cd17354", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd17354", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "843817", "url": "https://www.ncbi.nlm.nih.gov/gene/843817", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR010658", "url": "https://www.ebi.ac.uk/interpro/entry/IPR010658", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036259", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036259", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR056555", "url": "https://www.ebi.ac.uk/interpro/entry/IPR056555", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT1G74780", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT1G74780", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "FYGFTFC", "url": "https://omabrowser.org/oma/group/FYGFTFC/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "Q9SSG2", "url": "https://www.orthodb.org/?gene=Q9SSG2", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR21576", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR21576", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR21576:SF22", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR21576:SF22", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF06813", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF06813", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF23262", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF23262", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "AT1G74780", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT1G74780", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9SSG2", "url": "https://www.uniprot.org/uniprotkb/Q9SSG2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9SSG2-1", "url": "https://www.uniprot.org/uniprotkb/Q9SSG2-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MEILRTKWVAMTASIWIQCASGASYTFGIYSAVLKSTQSYDQSTLDTVSVFKDIGANAGVFSGLLYTYATSNRLRGRGGGIGGAGGPWVVLAVGAIQCFAGYFLIWASVTGLIRKPPVPLMCLFMFLAAQSQTFFNTANVVSAVENFADYGGTAVGIMKGFLGLSGAILIQLYETLCAGDPASFILLLAVTPTVLSLLVMPLVRIYETSVADDKKHLNGLSAVSLIIAAYLMIIIILKNTFGLSSWANIVTLVCLLVMLALPLLIARRAQRDGMEKTVPHDYSPLISSPKATTSGNQSSEGDSKVEAGLSENLNLLQAMKKLSFWLLFLAMICGMGSGLSTINNIRQIGESLRYSSVEINSLVSLWSIWNFLGRFGAGYASDALLHKKGWPRPLLMAATLGTMSIGHLIIASGFQGNLYVGSVIVGVCYGSQWSLMPTITSELFGIRHMGTIFNTISVASPIGSYIFSVRLIGYIYDKTASGEGNTCYGSHCFRLSFIIMASVAFFGFLVAIVLFFRTKTLYRQILVKRLHHR", "length": 533, "header": "tr|Q9SSG2-1|Q9SSG2_ARATH Isoform 1 of Nodulin-like / Major Facilitator Superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SSG2-1" }, "isoforms": [ { "isoform_ac": "Q9SSG2-1", "url": "https://www.uniprot.org/uniprotkb/Q9SSG2/entry", "sequence": { "sequence": "MEILRTKWVAMTASIWIQCASGASYTFGIYSAVLKSTQSYDQSTLDTVSVFKDIGANAGVFSGLLYTYATSNRLRGRGGGIGGAGGPWVVLAVGAIQCFAGYFLIWASVTGLIRKPPVPLMCLFMFLAAQSQTFFNTANVVSAVENFADYGGTAVGIMKGFLGLSGAILIQLYETLCAGDPASFILLLAVTPTVLSLLVMPLVRIYETSVADDKKHLNGLSAVSLIIAAYLMIIIILKNTFGLSSWANIVTLVCLLVMLALPLLIARRAQRDGMEKTVPHDYSPLISSPKATTSGNQSSEGDSKVEAGLSENLNLLQAMKKLSFWLLFLAMICGMGSGLSTINNIRQIGESLRYSSVEINSLVSLWSIWNFLGRFGAGYASDALLHKKGWPRPLLMAATLGTMSIGHLIIASGFQGNLYVGSVIVGVCYGSQWSLMPTITSELFGIRHMGTIFNTISVASPIGSYIFSVRLIGYIYDKTASGEGNTCYGSHCFRLSFIIMASVAFFGFLVAIVLFFRTKTLYRQILVKRLHHR", "length": 533, "header": "tr|Q9SSG2-1|Q9SSG2_ARATH Isoform 1 of Nodulin-like / Major Facilitator Superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SSG2-1" }, "locus": { "chromosome": "1", "start_pos": 28095729, "end_pos": 28098225, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT1G74780.1", "url": "https://www.ensemblgenomes.org/id/AT1G74780.1" }, { "database": "Ensembl Peptide", "id": "AT1G74780.1", "url": "https://www.ensemblgenomes.org/id/AT1G74780.1" } ] } } ], "glycosylation": [], "phosphorylation": [ { "start_pos": 287, "end_pos": 287, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SSG2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SSG2" }, { "database": "PubMed", "id": "19376835", "url": "https://glygen.org/publication/PubMed/19376835" } ], "site_lbl": "Ser287" }, { "start_pos": 288, "end_pos": 288, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SSG2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SSG2" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ], "site_lbl": "Ser288" } ], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Theologis A, Ecker J R, Palm C J, Federspiel N A, Kaul S, White O, Alonso J, Altafi H, Araujo R, Bowman C L, Brooks S Y, Buehler E, Chan A, Chao Q, Chen H, Cheuk R F, Chin C W, Chung M K, Conn L, Conway A B, Conway A R, Creasy T H, Dewar K, Dunn P, Etgu P, Feldblyum T V, Feng J, Fong B, Fujii C Y, Gill J E, Goldsmith A D, Haas B, Hansen N F, Hughes B, Huizar L, Hunter J L, Jenkins J, Johnson-Hopson C, Khan S, Khaykin E, Kim C J, Koo H L, Kremenetskaia I, Kurtz D B, Kwan A, Lam B, Langin-Hooper S, Lee A, Lee J M, Lenz C A, Li J H, Li Y, Lin X, Liu S X, Liu Z A, Luros J S, Maiti R, Marziali A, Militscher J, Miranda M, Nguyen M, Nierman W C, Osborne B I, Pai G, Peterson J, Pham P K, Rizzo M, Rooney T, Rowley D, Sakano H, Salzberg S L, Schwartz J R, Shinn P, Southwick A M, Sun H, Tallon L J, Tambunga G, Toriumi M J, Town C D, Utterback T, Van Aken S, Vaysberg M, Vysotskaia V S, Walker M, Wu D, Yu G, Fraser C M, Venter J C, Davis R W", "evidence": [ { "database": "UniProtKB", "id": "Q9SSG2", "url": "https://www.uniprot.org/uniprotkb/Q9SSG2" } ], "reference": [ { "type": "PubMed", "id": "11130712", "url": "https://glygen.org/publication/PubMed/11130712" } ] }, { "title": "Large-scale Arabidopsis phosphoproteome profiling reveals novel chloroplast kinase substrates and phosphorylation networks.", "journal": "Plant physiology", "date": "2009-06", "authors": "Reiland Sonja, Messerli Ga\u00eblle, Baerenfaller Katja, Gerrits Bertran, Endler Anne, Grossmann Jonas, Gruissem Wilhelm, Baginsky Sacha", "evidence": [ { "database": "iPTMnet", "id": "Q9SSG2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SSG2" } ], "reference": [ { "type": "PubMed", "id": "19376835", "url": "https://glygen.org/publication/PubMed/19376835" } ] }, { "title": "Quantitative phosphoproteomics of the ataxia telangiectasia-mutated (ATM) and ataxia telangiectasia-mutated and rad3-related (ATR) dependent DNA damage response in Arabidopsis thaliana.", "journal": "Molecular & cellular proteomics : MCP", "date": "2015-03", "authors": "Roitinger Elisabeth, Hofer Manuel, K\u00f6cher Thomas, Pichler Peter, Novatchkova Maria, Yang Jianhua, Schl\u00f6gelhofer Peter, Mechtler Karl", "evidence": [ { "database": "iPTMnet", "id": "Q9SSG2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SSG2" } ], "reference": [ { "type": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9SSG2", "url": "https://www.uniprot.org/uniprotkb/Q9SSG2" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT1G74780", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT1G74780", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "Q9SSG2", "url": "https://www.uniprot.org/uniprotkb/Q9SSG2" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 296, "end_pos": 298, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], 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"MADPETLAALKRAYADTILNTTKEAAARVMVSEKKARRYQQELVTVRNEALHTLVRLKQMLDSKVKETEMQSLKQQQKVEELEAQLGEAEDIVGELRLELRVLHDELKKLTDGQKHLKKNHEENLCWNNRDAAVSVMPEVSCSHENTEAVGFCIPVEQNGSVVANGIKVPSLTRINSINRCSYKDNKDQCHYTLPSILTKRRETEGLAQMIHTVDSSMANGVLSSSVEVGDVNDGVCLHEVSSCKIVESLEMSGCADATDSISSVKDGEAPIVSPNSSQKDVGTLISLKTSPPREHENDRKLEISETEARKEEKESCENMEVSASPLCEETPVLALSKNRCIKYTFKRKRKKEVLSNLEGDSSFEESRNMKQKTVEKDDGYLESLKPSFTSESSRDVVYA", "length": 400, "header": "tr|Q9SSG6-1|Q9SSG6_ARATH Isoform 1 of Uncharacterized protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SSG6-1" }, "locus": { "chromosome": "1", "start_pos": 28123301, "end_pos": 28126076, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT1G74860.1", "url": "https://www.ensemblgenomes.org/id/AT1G74860.1" }, { "database": "Ensembl Peptide", "id": "AT1G74860.1", "url": "https://www.ensemblgenomes.org/id/AT1G74860.1" } ] } } ], "glycosylation": [], "phosphorylation": [ { "start_pos": 274, "end_pos": 274, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SSG6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SSG6" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ], "site_lbl": "Ser274" }, { "start_pos": 291, "end_pos": 291, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SSG6", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SSG6" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ], "site_lbl": "Ser291" } ], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Theologis A, Ecker J R, Palm C J, Federspiel N A, Kaul S, White O, Alonso J, Altafi H, Araujo R, Bowman C L, Brooks S Y, Buehler E, Chan A, Chao Q, Chen H, Cheuk R F, Chin C W, Chung M K, Conn L, Conway A B, Conway A R, Creasy T H, Dewar K, Dunn P, Etgu P, Feldblyum T V, Feng J, Fong B, Fujii C Y, Gill J E, Goldsmith A D, Haas B, Hansen N F, Hughes B, Huizar L, Hunter J L, Jenkins J, Johnson-Hopson C, Khan S, Khaykin E, Kim C J, Koo H L, Kremenetskaia I, Kurtz D B, Kwan A, Lam B, Langin-Hooper S, Lee A, Lee J M, Lenz C A, Li J H, Li Y, Lin X, Liu S X, Liu Z A, Luros J S, Maiti R, Marziali A, Militscher J, Miranda M, Nguyen M, Nierman W C, Osborne B I, Pai G, Peterson J, Pham P K, Rizzo M, Rooney T, Rowley D, Sakano H, Salzberg S L, Schwartz J R, Shinn P, Southwick A M, Sun H, Tallon L J, Tambunga G, Toriumi M J, Town C D, Utterback T, Van Aken S, Vaysberg M, Vysotskaia V S, Walker M, Wu D, Yu G, Fraser C M, Venter J C, Davis R W", "evidence": [ { "database": 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"https://www.ebi.ac.uk/interpro/entry/pfam/PF08263", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF13855", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF13855", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_001117591", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001117591", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT1G73066", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT1G73066", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9SSM0", "url": "https://www.uniprot.org/uniprotkb/Q9SSM0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9SSM0-1", "url": "https://www.uniprot.org/uniprotkb/Q9SSM0-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MENLGLFQILLLFCLFVSVRIVSVSCLNSDGLTLLSLRKHLDKVPPELTSTWKTNASEATPCNWFGIICDDSKKVTSLNFTGSGVSGQLGPEIGQLKSLEILDMSSNNFSGIIPSSLGNCSSLVYIDLSENSFSGKVPDTLGSLKSLADLYLYSNSLTGELPKSLFRIPVLNYLHVEHNNLTGLIPQNVGEAKELLHLRLFDNQFTGTIPESIGNCSKLEILYLHKNKLVGSLPASLNLLESLTDLFVANNSLRGTVQFGSTKCRNLVTLDLSYNEFEGGVPPELGNCSSLDALVIVSGNLSGTIPSSLGMLKNLTILNLSENRLSGSIPAELGNCSSLNLLKLNDNQLVGGIPSALGKLRKLESLELFENRFSGEIPIEIWKIQSLTQLLVYRNNLTGKLPEEITKLKNLKIVTLFNNSFYGVIPPNLGLNSNLEIIDFIGNNFTGEIPRNLCHGKMLTVFNLGSNRLHGKIPASVSQCKTLSRFILRENNLSGFLPKFSKNQDLSFLDLNSNSFEGPIPRSLGSCRNLTTINLSRNKLTRNIPRELENLQNLSHLNLGSNLLNGTVPSKFSNWKELTTLVLSGNRFSGFVPPDRHS", "length": 598, "header": "tr|Q9SSM0-1|Q9SSM0_ARATH Isoform 1 of Leucine-rich repeat family protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9SSM0-1" }, "isoforms": [ { "isoform_ac": "Q9SSM0-1", "url": "https://www.uniprot.org/uniprotkb/Q9SSM0/entry", "sequence": { "sequence": "MENLGLFQILLLFCLFVSVRIVSVSCLNSDGLTLLSLRKHLDKVPPELTSTWKTNASEATPCNWFGIICDDSKKVTSLNFTGSGVSGQLGPEIGQLKSLEILDMSSNNFSGIIPSSLGNCSSLVYIDLSENSFSGKVPDTLGSLKSLADLYLYSNSLTGELPKSLFRIPVLNYLHVEHNNLTGLIPQNVGEAKELLHLRLFDNQFTGTIPESIGNCSKLEILYLHKNKLVGSLPASLNLLESLTDLFVANNSLRGTVQFGSTKCRNLVTLDLSYNEFEGGVPPELGNCSSLDALVIVSGNLSGTIPSSLGMLKNLTILNLSENRLSGSIPAELGNCSSLNLLKLNDNQLVGGIPSALGKLRKLESLELFENRFSGEIPIEIWKIQSLTQLLVYRNNLTGKLPEEITKLKNLKIVTLFNNSFYGVIPPNLGLNSNLEIIDFIGNNFTGEIPRNLCHGKMLTVFNLGSNRLHGKIPASVSQCKTLSRFILRENNLSGFLPKFSKNQDLSFLDLNSNSFEGPIPRSLGSCRNLTTINLSRNKLTRNIPRELENLQNLSHLNLGSNLLNGTVPSKFSNWKELTTLVLSGNRFSGFVPPDRHS", "length": 598, "header": "tr|Q9SSM0-1|Q9SSM0_ARATH Isoform 1 of Leucine-rich repeat family protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9SSM0-1" }, "locus": { "chromosome": "1", "start_pos": 27481785, "end_pos": 27484078, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT1G73066.1", "url": "https://www.ensemblgenomes.org/id/AT1G73066.1" }, { "database": "Ensembl Peptide", "id": "AT1G73066.1", "url": "https://www.ensemblgenomes.org/id/AT1G73066.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Theologis A, Ecker J R, Palm C J, Federspiel N A, Kaul S, White O, Alonso J, Altafi H, Araujo R, Bowman C L, Brooks S Y, Buehler E, Chan A, Chao Q, Chen H, Cheuk R F, Chin C W, Chung M K, Conn L, Conway A B, Conway A R, Creasy T H, Dewar K, Dunn P, Etgu P, Feldblyum T V, Feng J, Fong B, Fujii C Y, Gill J E, Goldsmith A D, Haas B, Hansen N F, Hughes B, Huizar L, Hunter J L, Jenkins J, Johnson-Hopson C, Khan S, Khaykin E, Kim C J, Koo H L, Kremenetskaia I, Kurtz D B, Kwan A, Lam B, Langin-Hooper S, Lee A, Lee J M, Lenz C A, Li J H, Li Y, Lin X, Liu S X, Liu Z A, Luros J S, Maiti R, Marziali A, Militscher J, Miranda M, Nguyen M, Nierman W C, Osborne B I, Pai G, Peterson J, Pham P K, Rizzo M, Rooney T, Rowley D, Sakano H, Salzberg S L, Schwartz J R, Shinn P, Southwick A M, Sun H, Tallon L J, Tambunga G, Toriumi M J, Town C D, Utterback T, Van Aken S, Vaysberg M, Vysotskaia V S, Walker M, Wu D, Yu G, Fraser C M, Venter J C, Davis R W", "evidence": [ { "database": "UniProtKB", "id": "Q9SSM0", "url": "https://www.uniprot.org/uniprotkb/Q9SSM0" } ], "reference": [ { "type": "PubMed", "id": "11130712", "url": "https://glygen.org/publication/PubMed/11130712" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9SSM0", "url": "https://www.uniprot.org/uniprotkb/Q9SSM0" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT1G73066", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT1G73066", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0ABK0LW19-1", "protein_name": "Leucine-rich repeats and IQ motif containing 4", "gene_name": "Lrriq4", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MKGLKETVGGLEVGTQKCLRSLLLIWGVFLRLPQIQGRRRGPSRPQSKATLLTKTGDQWWSRATPYLRLLRFEIIDTFKSLTKELLRQEHLTQAPQRNDPHRVTDRTFFIDGSNQNLKTIPPEILALKELEEVHLENNQISEIPQGIQHLEKIKVLYLHNNSLQNLCQELGSLSNLESLDLSGNLLVLSSLQVICRLRTLRELRLYNTGLTEVPSGICKSLHHLELLGLSENYLESLPKEIVNQTKLREIYLKQNHFENFPCDLCVLCNLEVIDLDDNKLKTIPEDIGHLVRLQKFYVASNHLMGLPESLSHCRKLSVLDLTHNSIHSLPYSLEQLTELTEVGLSGNRLEKVPRLLCNWVSLHLLYLRNTSLHGLRRSFKHLVNLRFLDLSQNHIDHFPVQICTLKDLEILALDDNKVKQLPPAISSLSKLKILGLTGNDFVSFPEEIFSLVSLEKLYIGQDQGSKLSSLPENIKKLTNLKELYIENNQLEQLPASLGLMPNLEVLDCRHNLLRQLPDAICQTRDLRELLLEDNLLSRLPENLDHLVNLKVLTLTDNLMEDPPMEVCEQGNEAIWRHLKENRIRKVMATKIQAWWRGIMVRKGYGSYEELLKARKKGKSPPKDKKGKAAPKGKPAKGNKK", "length": 640 }, "evidence": [ { "id": "Q9SSM0", "url": "https://omabrowser.org/oma/group/Q9SSM0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A6H6A4-1", "protein_name": "Leucine-rich repeat and IQ domain-containing protein 4", "gene_name": "Lrriq4", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MHHSSSGSRCVLQNGLELTVILPRLHRFDIIDTFKTLTKELLRQEHLPKVLQKKEPHQLTDRTFFIDGSNQGLKTIPSEILALKELEEVHLENNQIAEIPQGIQQLQNTKVLYLHNNSLQDLCPELGALSSLESLDLSGNPLVISSLHVVSRLRTLRELRLYRTGLTEIPTGICKSLHHLELFGLSENFLESLPEEIVNQTKLREIYLKQNHFEVFPCDLCVLYNLEVIDLDENKLKSIPGDIGHLVRLQKFYVASNHLMSLPESLSQCSKLSVLDLTHNSIHSLPSSLELLTELTEVGLSGNRLEKVPRLLCSWVSLHLLYLRNTSLHGLRDSFKRLINLRFLDLSQNHIEHFPVQICALKNLEILALDDNKVRQLPPSISLLSNLKILGLTGNDLLSFPEEIFSLISLEKLYIGQDQGSKLSSLPENIKRLMNLKELYIENNRLEQLPASLGLMPNLEVLDCRHNLLKQLPDAICRTRNLRELLLEDNLLCCLPENLDHLVNLKVLTLMNNPMVDPPIYVCNQGNEAIWKHLKENRIRKMMATTIQAWWRGIMVRKGYGSYEELLKARKKGKSPPKDKKGKKAAKGKPEKGNKK", "length": 596 }, "evidence": [ { "id": "Q9SSM0", "url": "https://omabrowser.org/oma/group/Q9SSM0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A6NIV6-1", "protein_name": "Leucine-rich repeat and IQ domain-containing protein 4", "gene_name": "LRRIQ4", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MSKDIKSVEHSPKIHQRNDPQHVNDRTFFIDASNQSLTAIPLEIFTFTELEEVHLENNQIEEIPQEIQRLKNIRVLYLDKNNLRSLCPALGLLSSLESLDLSYNPIFSSSLVVVSFLHALRELRLYQTDLKEIPVVIFKNLHHLELLGLTGNHLKCLPKEIVNQTKLREIYLKRNQFEVFPQELCVLYTLEIIDLDENKIGAIPEEIGHLTGLQKFYMASNNLPVLPASLCQCSQLSVLDLSHNLLHSIPKSFAELRKMTEIGLSGNRLEKVPRLICRWTSLHLLYLGNTGLHRLRGSFRCLVNLRFLDLSQNHLHHCPLQICALKNLEVLGLDDNKIGQLPSELGSLSKLKILGLTGNEFLSFPEEVLSLASLEKLYIGQDQGFKLTYVPEHIRKLQSLKELYIENNHLEYLPVSLGSMPNLEVLDCRHNLLKQLPDAICQAQALKELRLEDNLLTHLPENLDSLVNLKVLTLMDNPMEEPPKEVCAEGNEAIWKYLKENRNRNIMATKIQAWWRGTMVQRGFGKFGELLKPQKKGKTSPKDKKGKKDVKGKPGKGKKK", "length": 560 }, "evidence": [ { "id": "Q9SSM0", "url": "https://omabrowser.org/oma/group/Q9SSM0/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "Q9SSM0", "url": "https://www.uniprot.org/uniprotkb/Q9SSM0" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "kinase activity", "id": "GO:0016301", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016301", "evidence": [ { "database": "UniProtKB", "id": "Q9SSM0", "url": "https://www.uniprot.org/uniprotkb/Q9SSM0" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 108, "end_pos": 110, "annotation": "n_glycosylation_sequon" }, { "start_pos": 119, "end_pos": 121, "annotation": "n_glycosylation_sequon" }, { "start_pos": 180, "end_pos": 182, "annotation": "n_glycosylation_sequon" }, { "start_pos": 215, "end_pos": 217, "annotation": "n_glycosylation_sequon" }, { "start_pos": 250, "end_pos": 252, "annotation": "n_glycosylation_sequon" }, { "start_pos": 287, "end_pos": 289, "annotation": "n_glycosylation_sequon" }, { "start_pos": 300, "end_pos": 302, "annotation": "n_glycosylation_sequon" }, { "start_pos": 314, "end_pos": 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[], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "Q9SSM0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SSM0" }, { "id": "PF08263", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF08263" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Leucine-rich repeat-containing N-terminal plant-type", "eco_id": "ECO_0000259", "start_pos": 27, "end_pos": 70, "start_aa": "Leu", "end_aa": "Asp", "glycosite_overlap": [] } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 108, "end_pos": 110 }, { "start_pos": 119, 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"o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "Q9SSM3-1", "uniprot_ac": "Q9SSM3", "uniprot_id": "JAL19_ARATH", "mass": { "chemical_mass": 19560.0, "monoisotopic_mass": 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{ "name": "Mannose-binding lectin superfamily protein", "type": "synonym", "evidence": [ { "id": "NP_001319369", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001319369" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9SSM3", "url": "https://www.uniprot.org/uniprotkb/Q9SSM3" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "JAL19", "url": "https://www.uniprot.org/uniprotkb/Q9SSM3", "locus": {} } ], "crossref": [ { "id": "Q9SSM3", "url": "https://alphafold.ebi.ac.uk/entry/Q9SSM3", "database": "AlphaFoldDB", "categories": [] }, { "id": "AT1G73040", "url": "https://bar.utoronto.ca/thalemine/portal.do?externalids=AT1G73040", "database": "Araport", "categories": [ "Protein", 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"https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT1G73040", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9SSM3", "url": "https://www.uniprot.org/uniprotkb/Q9SSM3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9SSM3-1", "url": "https://www.uniprot.org/uniprotkb/Q9SSM3-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MDQQQQGDKNLTVFVGPWGGNGGTTWDDGIYDGVREIRLVYDHCIDSISVIYDKNGKPAKSEKHGGVGGNKTSEIKLQYPEEYLTGVSGYYCPMVNSGTPVIRSMTFKSNKQVYGPYGVEQGTPFTFSVNGGRIVGMNGRSGWYLDSIGFHLSRPKSTKMINKLRKKIHWLTRIVA", "length": 176, "header": "sp|Q9SSM3-1|JAL19_ARATH Isoform 1 of Jacalin-related lectin 19 OS=Arabidopsis thaliana OX=3702 GN=JAL19 PE=2 SV=1 CANONICAL=Q9SSM3-1" }, "isoforms": [ { "isoform_ac": "Q9SSM3-1", "url": "https://www.uniprot.org/uniprotkb/Q9SSM3/entry#Q9SSM3-1", "sequence": { "sequence": "MDQQQQGDKNLTVFVGPWGGNGGTTWDDGIYDGVREIRLVYDHCIDSISVIYDKNGKPAKSEKHGGVGGNKTSEIKLQYPEEYLTGVSGYYCPMVNSGTPVIRSMTFKSNKQVYGPYGVEQGTPFTFSVNGGRIVGMNGRSGWYLDSIGFHLSRPKSTKMINKLRKKIHWLTRIVA", "length": 176, "header": "sp|Q9SSM3-1|JAL19_ARATH Isoform 1 of Jacalin-related lectin 19 OS=Arabidopsis thaliana OX=3702 GN=JAL19 PE=2 SV=1 CANONICAL=Q9SSM3-1" }, "locus": { "chromosome": "1", "start_pos": 27475060, "end_pos": 27475962, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT1G73040.1", "url": "https://www.ensemblgenomes.org/id/AT1G73040.1" }, { "database": "Ensembl Peptide", "id": "AT1G73040.1", "url": "https://www.ensemblgenomes.org/id/AT1G73040.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Theologis A, Ecker J R, Palm C J, Federspiel N A, Kaul S, White O, Alonso J, Altafi H, 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J S, Maiti R, Marziali A, Militscher J, Miranda M, Nguyen M, Nierman W C, Osborne B I, Pai G, Peterson J, Pham P K, Rizzo M, Rooney T, Rowley D, Sakano H, Salzberg S L, Schwartz J R, Shinn P, Southwick A M, Sun H, Tallon L J, Tambunga G, Toriumi M J, Town C D, Utterback T, Van Aken S, Vaysberg M, Vysotskaia V S, Walker M, Wu D, Yu G, Fraser C M, Venter J C, Davis R W", "evidence": [ { "database": "UniProtKB", "id": "Q9SSN4", "url": "https://www.uniprot.org/uniprotkb/Q9SSN4" } ], "reference": [ { "type": "PubMed", "id": "11130712", "url": "https://glygen.org/publication/PubMed/11130712" } ] }, { "title": "Nitrate and ammonium lead to distinct global dynamic phosphorylation patterns when resupplied to nitrogen-starved Arabidopsis seedlings.", "journal": "The Plant journal : for cell and molecular biology", "date": "2012-03", "authors": "Engelsberger Wolfgang R, Schulze Waltraud X", "evidence": [ { "database": "iPTMnet", "id": "Q9SSN4", "url": 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"MSSATATYNYDVFLSFRGPDTRRKFISFLYKELVGRDIRTFKDDKELENGQMISPELILAIEDSRFAVVVVSVNYAASSWCLDELVKIMDIQKNKGSITVMPIFYGVNPCHLRRQIGDVAEQFKKHEAREKDLEKVLKWRQALAALADISGDCSGEDDSKLVDVIADKISKELMIVTRISNGRNLVGIDKHMNELNRLMDLNSNKGKRMVGIWARGGSCRSALAKYVYQTSCQHFDSHCFLGNVKRICQGNYFESHLHKEFLDNIQGENSSKQSLKKQKVLLVADDVDKLEQLDALAGDFSGFGPGSVVIITTKDKQLLISYGIQLVYEAEFLTFQKFCRSFRSLAFKKRDDISAAFEWALYI", "length": 363, "header": "tr|Q9SSN6-1|Q9SSN6_ARATH Isoform 1 of Toll-Interleukin-Resistance (TIR) domain-containing protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SSN6-1" }, "isoforms": [ { "isoform_ac": "Q9SSN6-1", "url": "https://www.uniprot.org/uniprotkb/Q9SSN6/entry", "sequence": { "sequence": 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Peterson J, Pham P K, Rizzo M, Rooney T, Rowley D, Sakano H, Salzberg S L, Schwartz J R, Shinn P, Southwick A M, Sun H, Tallon L J, Tambunga G, Toriumi M J, Town C D, Utterback T, Van Aken S, Vaysberg M, Vysotskaia V S, Walker M, Wu D, Yu G, Fraser C M, Venter J C, Davis R W", "evidence": [ { "database": "UniProtKB", "id": "Q9SSP1", "url": "https://www.uniprot.org/uniprotkb/Q9SSP1" } ], "reference": [ { "type": "PubMed", "id": "11130712", "url": "https://glygen.org/publication/PubMed/11130712" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9SSP1", "url": "https://www.uniprot.org/uniprotkb/Q9SSP1" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], 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"pmid": "" } ] }, { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "chloroplast", "id": "GO:0009507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009507", "evidence": [ { "database": "UniProtKB", "id": "Q9SSP1", "url": "https://www.uniprot.org/uniprotkb/Q9SSP1" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "Q9SSP1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SSP1" }, { "id": "PS50104", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50104" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "TIR", "eco_id": "ECO_0000259", "start_pos": 5, "end_pos": 158, "start_aa": "Ser", "end_aa": "Ser", "glycosite_overlap": [] } ], "binding_sites": [], "synthesized_glycans": [], 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Maiti R, Marziali A, Militscher J, Miranda M, Nguyen M, Nierman W C, Osborne B I, Pai G, Peterson J, Pham P K, Rizzo M, Rooney T, Rowley D, Sakano H, Salzberg S L, Schwartz J R, Shinn P, Southwick A M, Sun H, Tallon L J, Tambunga G, Toriumi M J, Town C D, Utterback T, Van Aken S, Vaysberg M, Vysotskaia V S, Walker M, Wu D, Yu G, Fraser C M, Venter J C, Davis R W", "evidence": [ { "database": "UniProtKB", "id": "Q9SSP6", "url": "https://www.uniprot.org/uniprotkb/Q9SSP6" } ], "reference": [ { "type": "PubMed", "id": "11130712", "url": "https://glygen.org/publication/PubMed/11130712" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9SSP6", "url": "https://www.uniprot.org/uniprotkb/Q9SSP6" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT1G52420", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT1G52420", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "glycosyltransferase activity", "id": "GO:0016757", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016757", "evidence": [ { "database": "UniProtKB", "id": "Q9SSP6", "url": "https://www.uniprot.org/uniprotkb/Q9SSP6" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "Golgi cis cisterna", "id": "GO:0000137", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000137", "evidence": [ { "database": "UniProtKB", "id": "Q9SSP6", "url": "https://www.uniprot.org/uniprotkb/Q9SSP6" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 118, "end_pos": 120, "annotation": 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"length": 1135, "header": "tr|A0A1P8AN28-1|A0A1P8AN28_ARATH Computationally mapped isoform of Ubiquitin carboxyl-terminal hydrolase-related protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SSP7-1" }, "locus": { "chromosome": "1", "start_pos": 19531350, "end_pos": 19536333, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT1G52430.2", "url": "https://www.ensemblgenomes.org/id/AT1G52430.2" }, { "database": "Ensembl Peptide", "id": "AT1G52430.2", "url": "https://www.ensemblgenomes.org/id/AT1G52430.2" } ] } }, { "isoform_ac": "Q9SSP7-1", "url": "https://www.uniprot.org/uniprotkb/Q9SSP7/entry", "sequence": { "sequence": "MESSSSITEGKPYKDANDHIAKGNYIEALKILEDLIRIHREDQNAWLIRIKQGQVFLKLSLETENSDMEFTYLLGSVGCYSEDERLSPFCANSLHMLANKLGSLMYYKKCLVKAKLALSVTFQDITDPVVRQIRFNEKQKQILRIIKDAESKIASPETLVASTMKQVSKPKVLESEKIPETRQGVVKRLRSFWVGLDVKVKRDFMKVNIAKLLSFVERVRYRDGRDVLENVLASARKDMIWTFWMCCSKRFSSAEECKNHLEEVHAADFKPGTKKDKVQRIGKDWARKISNGSWEPVDAAAAVEMIKNQLADVKAFASKCKNGWSKEWPLAADEERGKLLKEIKLLLVSLCDHKTLSCSVRDWVMYFPVKHLEKLEVSAQSLVDSLLVETPQSICFLECPELNQILDFLNNLKCERNDGAKLVSRAVDSFLDRTRVKENIDFDPQFSYLLLDRRLLKSNNAPCDDERTINVFDPIAHYAKAHAQGDDIIPWLYDNISVDKIFPKPIREYNLDIWLAVLRAVQFTCRNLETKYTNRKLLLGYVTSLMIIERICMSEDERRRNLQEDQWIRYASILCDECEEILPEISVDRKIFLGAVRDVLEGALLPPFDVPDLDDCLNLIREQKSCRDDKVLESIGLLTLVVTHKVLLIDSKILLIENSRISLLNNLARLSAFDNRTYILQLMKPFLLNEIMNMERKAKADAVAADLALEEEKKAQSKKKNDKINKQRASMSKFSPLDQTVEHKPPVNLELKTVEEDSMEPENALASESGPLESSSKTQNQEEATKDGPAEMLDMPKEDSLSAHSESAIGGAAARYNSALDMTLKALLNIKVLKEDLKNNTQRFQQVPSALQHFFNAFVSESIKTEGVYSCILSDLLSSLEEVISMSSDAAKVVVAILEFWCCWKNPEGESLVTRLFTLAENERMSCRKCRWITNYPEKSSYAIVMPADSIRQLKCAFESMKFVDILKVIRMEYQKSCNIKTGGCGESNFVHHFISRCPPVFTIVLEWEKSETEKEISETTKALDLELDISRLYVGLEPNTNYRLVSMVGCGEEEEHFCLAYENNRWVNLGRESLAGEDVSNWKSEVIFFGDFKVNLRQESLSGEDDGNWKSVVSFFGERKIRPEILFYEAVGSMA", "length": 1136, "header": "tr|Q9SSP7-1|Q9SSP7_ARATH Isoform 1 of Ubiquitin carboxyl-terminal hydrolase-related protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SSP7-1" }, "locus": { "chromosome": "1", "start_pos": 19531350, "end_pos": 19536422, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT1G52430.1", "url": "https://www.ensemblgenomes.org/id/AT1G52430.1" }, { "database": "Ensembl Peptide", "id": "AT1G52430.1", "url": "https://www.ensemblgenomes.org/id/AT1G52430.1" } ] } } ], "glycosylation": [], "phosphorylation": [ { "start_pos": 234, "end_pos": 234, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SSP7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SSP7" }, { "database": "PubMed", "id": "22060019", "url": "https://glygen.org/publication/PubMed/22060019" } ], "site_lbl": "Ser234" }, { "start_pos": 429, "end_pos": 429, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SSP7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SSP7" }, { "database": "PubMed", "id": "22060019", "url": "https://glygen.org/publication/PubMed/22060019" } ], "site_lbl": "Ser429" } ], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Theologis A, Ecker J R, Palm C J, Federspiel N A, Kaul S, White O, Alonso J, Altafi H, Araujo R, Bowman C L, Brooks S Y, Buehler E, Chan A, Chao Q, Chen H, Cheuk R F, Chin C W, Chung M K, Conn L, Conway A B, Conway A R, Creasy T H, Dewar K, Dunn P, Etgu P, Feldblyum T V, Feng J, Fong B, Fujii C Y, Gill J E, Goldsmith A D, Haas B, Hansen N F, Hughes B, Huizar L, Hunter J L, Jenkins J, Johnson-Hopson C, Khan S, Khaykin E, Kim C J, Koo H L, Kremenetskaia I, Kurtz D B, Kwan A, Lam B, Langin-Hooper S, Lee A, Lee J M, Lenz C A, Li J H, Li Y, Lin X, Liu S X, Liu Z A, Luros J S, Maiti R, Marziali A, Militscher J, Miranda M, Nguyen M, Nierman W C, Osborne B I, Pai G, Peterson J, Pham P K, Rizzo M, Rooney T, Rowley D, Sakano H, Salzberg S L, Schwartz J R, Shinn P, Southwick A M, Sun H, Tallon L J, Tambunga G, Toriumi M J, Town C D, Utterback T, Van Aken S, Vaysberg M, Vysotskaia V S, Walker M, Wu D, Yu G, Fraser C M, Venter J C, Davis R W", "evidence": [ { "database": "UniProtKB", "id": "Q9SSP7", "url": "https://www.uniprot.org/uniprotkb/Q9SSP7" } ], "reference": [ { "type": "PubMed", "id": "11130712", "url": "https://glygen.org/publication/PubMed/11130712" } ] }, { "title": "Nitrate and ammonium lead to distinct global dynamic phosphorylation patterns when resupplied to nitrogen-starved Arabidopsis seedlings.", "journal": "The Plant journal : for cell and molecular biology", "date": "2012-03", "authors": "Engelsberger Wolfgang R, Schulze Waltraud X", "evidence": [ { "database": "iPTMnet", "id": "Q9SSP7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SSP7" } ], "reference": [ { "type": "PubMed", "id": "22060019", "url": "https://glygen.org/publication/PubMed/22060019" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9SSP7", "url": "https://www.uniprot.org/uniprotkb/Q9SSP7" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT1G52430", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT1G52430", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q9SSP7", "url": "https://www.uniprot.org/uniprotkb/Q9SSP7" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "protein deubiquitination", "id": "GO:0016579", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016579", "evidence": [ { "database": "UniProtKB", "id": "Q9SSP7", "url": "https://www.uniprot.org/uniprotkb/Q9SSP7" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "cysteine-type deubiquitinase activity", "id": "GO:0004843", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004843", "evidence": [ { "database": "UniProtKB", "id": "Q9SSP7", "url": "https://www.uniprot.org/uniprotkb/Q9SSP7" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 291, "end_pos": 293, "annotation": "n_glycosylation_sequon" }, { "start_pos": 495, "end_pos": 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"snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 3 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "Q9SSP8-1", "uniprot_ac": "Q9SSP8", "uniprot_id": "Q9SSP8_ARATH", "mass": { "chemical_mass": 21836.0, "monoisotopic_mass": 21836.0 }, "refseq": {}, "gene_names": [ { "name": "F6D8.34", "type": "synonym", "evidence": [ { "id": "Q9SSP8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SSP8" } ] }, { "name": "F6D8_34", "type": "synonym", "evidence": [ { "id": "Q9SSP8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SSP8" } ] } ], "protein_names": [ { "name": "Alpha/beta-Hydrolases superfamily protein", "type": "synonym", "evidence": [ { "id": "Q9SSP8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SSP8/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9SSP8", "url": "https://www.uniprot.org/uniprotkb/Q9SSP8" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9SSP8", "locus": {} } ], "crossref": [ { "id": "AT1G52440", "url": "https://bar.utoronto.ca/thalemine/portal.do?externalids=AT1G52440", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "841675", "url": "https://www.ncbi.nlm.nih.gov/gene/841675", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR029058", "url": "https://www.ebi.ac.uk/interpro/entry/IPR029058", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT1G52440", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT1G52440", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "PTAHENN", "url": "https://omabrowser.org/oma/group/PTAHENN/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR46234", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR46234", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "AT1G52440", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT1G52440", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9SSP8", "url": "https://www.uniprot.org/uniprotkb/Q9SSP8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9SSP8-1", "url": "https://www.uniprot.org/uniprotkb/Q9SSP8-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MAASDSRNNRADEPGFVVQPKGEHRVIIVWLHDKDERSSDSLQFVEQLNLKNVKWICPSLVFPDSFIKGVGGLGMGAAVALHFATSCALNHYTINPRVVVGISGWLSNSGSLKRSIESASHGAPARAASQSIFITHGICDSVPHPCDCGEEAVLSLREAGFRDVKFTPFARFGPTAHENNRNVMVKSWLEEKLQLDVTIP", "length": 200, "header": "tr|Q9SSP8-1|Q9SSP8_ARATH Isoform 1 of Alpha/beta-Hydrolases superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9SSP8-1" }, "isoforms": [ { "isoform_ac": "Q9SSP8-1", "url": "https://www.uniprot.org/uniprotkb/Q9SSP8/entry", "sequence": { "sequence": "MAASDSRNNRADEPGFVVQPKGEHRVIIVWLHDKDERSSDSLQFVEQLNLKNVKWICPSLVFPDSFIKGVGGLGMGAAVALHFATSCALNHYTINPRVVVGISGWLSNSGSLKRSIESASHGAPARAASQSIFITHGICDSVPHPCDCGEEAVLSLREAGFRDVKFTPFARFGPTAHENNRNVMVKSWLEEKLQLDVTIP", "length": 200, "header": "tr|Q9SSP8-1|Q9SSP8_ARATH Isoform 1 of Alpha/beta-Hydrolases superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9SSP8-1" }, "locus": { "chromosome": "1", "start_pos": 19538821, "end_pos": 19540907, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT1G52440.1", "url": "https://www.ensemblgenomes.org/id/AT1G52440.1" }, { "database": "Ensembl Peptide", "id": "AT1G52440.1", "url": "https://www.ensemblgenomes.org/id/AT1G52440.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Theologis A, Ecker J R, Palm C J, Federspiel N A, Kaul S, White O, Alonso J, Altafi H, Araujo R, Bowman C L, Brooks S Y, Buehler E, Chan A, Chao Q, Chen H, Cheuk R F, Chin C W, Chung M K, Conn L, Conway A B, Conway A R, Creasy T H, Dewar K, Dunn P, Etgu P, Feldblyum T V, Feng J, Fong B, Fujii C Y, Gill J E, Goldsmith A D, Haas B, Hansen N F, Hughes B, Huizar L, Hunter J L, Jenkins J, Johnson-Hopson C, Khan S, Khaykin E, Kim C J, Koo H L, Kremenetskaia I, Kurtz D B, Kwan A, Lam B, Langin-Hooper S, Lee A, Lee J M, Lenz C A, Li J H, Li Y, Lin X, Liu S X, Liu Z A, Luros J S, Maiti R, Marziali A, Militscher J, Miranda M, Nguyen M, Nierman W C, Osborne B I, Pai G, Peterson J, Pham P K, Rizzo M, Rooney T, Rowley D, Sakano H, Salzberg S L, Schwartz J R, Shinn P, Southwick A M, Sun H, Tallon L J, Tambunga G, Toriumi M J, Town C D, Utterback T, Van Aken S, Vaysberg M, Vysotskaia V S, Walker M, Wu D, Yu G, Fraser C M, Venter J C, Davis R W", "evidence": [ { "database": "UniProtKB", "id": "Q9SSP8", "url": "https://www.uniprot.org/uniprotkb/Q9SSP8" } ], "reference": [ { "type": "PubMed", "id": "11130712", "url": "https://glygen.org/publication/PubMed/11130712" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9SSP8", "url": "https://www.uniprot.org/uniprotkb/Q9SSP8" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT1G52440", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT1G52440", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q9SSP8", "url": "https://www.uniprot.org/uniprotkb/Q9SSP8" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { 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"total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "Q9SSP9-1", "uniprot_ac": "Q9SSP9", "uniprot_id": "Q9SSP9_ARATH", "mass": { "chemical_mass": 129848.0, "monoisotopic_mass": 129848.0 }, "refseq": {}, "gene_names": [ { "name": "F6D8.33", "type": "synonym", "evidence": [ { "id": "Q9SSP9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SSP9" } ] }, { "name": "F6D8_33", "type": "synonym", "evidence": [ { "id": "Q9SSP9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SSP9" } ] } ], "protein_names": [ { "name": "Ubiquitin carboxyl-terminal hydrolase-related protein", "type": "synonym", "evidence": [ { "id": "Q9SSP9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SSP9/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9SSP9", "url": "https://www.uniprot.org/uniprotkb/Q9SSP9" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9SSP9", "locus": {} } ], "crossref": [ { "id": "AT1G52450", "url": "https://bar.utoronto.ca/thalemine/portal.do?externalids=AT1G52450", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "841676", "url": "https://www.ncbi.nlm.nih.gov/gene/841676", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR001394", "url": 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"Protein Classification" ] }, { "id": "PTHR22975:SF23", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR22975:SF23", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00443", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00443", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF04780", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF04780", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF04781", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF04781", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "AT1G52450", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT1G52450", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "A0A1P8AP20", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AP20", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A1P8AP20-1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AP20-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9SSP9", "url": "https://www.uniprot.org/uniprotkb/Q9SSP9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9SSP9-1", "url": "https://www.uniprot.org/uniprotkb/Q9SSP9-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MESSSSIKEGKLYKDAKDHIAKGNYINALKILEDLIRIHREDQNAWLIRIKQGQVFLKLSLETENSDMEFTYLLGSVGCYSEDERLSSFCAKSLHMLANKLGSLMYYKKCLVKAKQALSVTFPDITDSVARQIRMNEKKKEMLSVIKDAESKIASPETLVASTMKQVSKPKVLESEKIPDTREGVVKRLRSFWVRLDVKVKRDFMKVNIAKLLSFVETVRYRDGRDVLEKILASARKDMIWTFWMCCSKRFSSAEECKNHLEEVHAADFQPGTKKDKFQRIGKDWARKISIGSWEPVDAAAAVEMIKNQLADVKAFASKCKNGWSKEWPLAADEERGKLLKEIKLLLVSLCDHKTLSCSVRDWVMHFPVKHLEKLEVSAQSLVYSRLVETPQSICFLECPELNQILDFLKKIKCKRNDGAELVRRAVDSFLDRTRVKEKIDFDPQFSYLLLDRRLLKSNNAPCDDEGTINVFDPIAHYAKAHAQGDDIIPWLYDYNSVDKIFPKPIREYNLDIWLAVLRAVQFTCRNMETKYTNQKLFLGYSATLTIIENICMSEDERRRNLQEDQWIRYASILCDRCEEIVPEISLARKIFVCAVRDVFEGALLPTFDVPDLDDCLNLIREQKTRSDDKVLESIGLLKLAVTYKVLLIESKILLIDNSRISLLNNLARLSVFDNRTYILQLMKPFLLSAIMNMERKAKADAVAADLALEEEKKPQSKKKNDKINKHRASTSKSSPFDQTVEHKPPVNLELKTVEEDSMEPENALASENGPLESSSKTQNQEEATKDGPAEMLDMPKEDSLSAHSESAIGGAAARYNSALDMTLKALLNIKVLKEDLKNNTQRFQQVPSALQHFFNAFVSESIKTEGVYSCILSDLLSSLEEVISKSSDAAKVVVAILEFWFCWKNPEGESLVTRLFTLAENERMSCRKCRWITNYPEKSSYTIVMPADSIRQLKCAFESMKFVDILKVIRMEYQKSCDIKTGGCGESNFVHHFISRCPPVFTIVLEWEKSETEKEISETTKALDLELDISRLYVGLEPNTNYRLVSMVGCGEEEEHICLAYENNRWVNLGRESLAGEDVSHWKSAVIFFGDFKVNLREESLSGEDDGNWKSVVSFFGERKIRPEILFYEAVGSMA", "length": 1136, "header": "tr|Q9SSP9-1|Q9SSP9_ARATH Isoform 1 of Ubiquitin carboxyl-terminal hydrolase-related protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9SSP9-1" }, "isoforms": [ { "isoform_ac": "A0A1P8AP20-1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AP20/entry", "sequence": { "sequence": "MESSSSIKEGKLYKDAKDHIAKGNYINALKILEDLIRIHREDQNAWLIRIKQGQVFLKLSLETENSDMEFTYLLGSVGCYSEDERLSSFCAKSLHMLANKLGSLMYYKKCLVKAKQALSVTFPDITDSVARQIRMNEKKKEMLSVIKDAESKIASPETLVASTMKQVSKPKVLESEKIPDTREGVVKRLRSFWVRLDVKVKRDFMKVNIAKLLSFVETVRYRDGRDVLEKILASARKDMIWTFWMCCSKRFSSAEECKNHLEEVHAADFQPGTKKDKFQRIGKDWARKISIGSWEPVDAAAAVEMIKNQLADVKAFASKCKNGWSKEWPLAADEERGKLLKEIKLLLVSLCDHKTLSCSVRDWVMHFPVKHLEKLEVSAQSLVYSRLVETPQSICFLECPELNQILDFLKKIKCKRNDGAELVRRAVDSFLDRTRVKEKIDFDPQFSYLLLDRRLLKSNNAPCDDEGTINVFDPIAHYAKAHAQGDDIIPWLYDYNSVDKIFPKPIREYNLDIWLAVLRAVQFTCRNMETKYTNQKLFLGYSATLTIIENICMSEDERRRNLQEDQWIRYASILCDRCEEIVPEISLARKIFVCAVRDVFEGALLPTFDVPDLDDCLNLIREQKTRSDDKVLESIGLLKLAVTYKVLLIESKILLIDNSRISLLNNLARLSVFDNRTYILQLMKPFLLSAIMNMERKAKADAVAADLALEEEKKPQSKKKNDKINKHRASTSKSSPFDQTVEHKPPVNLELKTVEEDSMEPENALASENGPLESSSKTQNQEEATKDGPADMPKEDSLSAHSESAIGGAAARYNSALDMTLKALLNIKVLKEDLKNNTQRFQQVPSALQHFFNAFVSESIKTEGVYSCILSDLLSSLEEVISKSSDAAKVVVAILEFWFCWKNPEGESLVTRLFTLAENERMSCRKCRWITNYPEKSSYTIVMPADSIRQLKCAFESMKFVDILKVIRMEYQKSCDIKTGGCGESNFVHHFISRCPPVFTIVLEWEKSETEKEISETTKALDLELDISRLYVGLEPNTNYRLVSMVGCGEEEEHICLAYENNRWVNLGRESLAGEDVSHWKSAVIFFGDFKVNLREESLSGEDDGNWKSVVSFFGERKIRPEILFYEAVGSMA", "length": 1133, "header": "tr|A0A1P8AP20-1|A0A1P8AP20_ARATH Computationally mapped isoform of Ubiquitin carboxyl-terminal hydrolase-related protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9SSP9-1" }, "locus": { "chromosome": "1", "start_pos": 19541577, "end_pos": 19546266, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT1G52450.2", "url": "https://www.ensemblgenomes.org/id/AT1G52450.2" }, { "database": "Ensembl Peptide", "id": "AT1G52450.2", "url": "https://www.ensemblgenomes.org/id/AT1G52450.2" } ] } }, { "isoform_ac": "Q9SSP9-1", "url": "https://www.uniprot.org/uniprotkb/Q9SSP9/entry", "sequence": { "sequence": "MESSSSIKEGKLYKDAKDHIAKGNYINALKILEDLIRIHREDQNAWLIRIKQGQVFLKLSLETENSDMEFTYLLGSVGCYSEDERLSSFCAKSLHMLANKLGSLMYYKKCLVKAKQALSVTFPDITDSVARQIRMNEKKKEMLSVIKDAESKIASPETLVASTMKQVSKPKVLESEKIPDTREGVVKRLRSFWVRLDVKVKRDFMKVNIAKLLSFVETVRYRDGRDVLEKILASARKDMIWTFWMCCSKRFSSAEECKNHLEEVHAADFQPGTKKDKFQRIGKDWARKISIGSWEPVDAAAAVEMIKNQLADVKAFASKCKNGWSKEWPLAADEERGKLLKEIKLLLVSLCDHKTLSCSVRDWVMHFPVKHLEKLEVSAQSLVYSRLVETPQSICFLECPELNQILDFLKKIKCKRNDGAELVRRAVDSFLDRTRVKEKIDFDPQFSYLLLDRRLLKSNNAPCDDEGTINVFDPIAHYAKAHAQGDDIIPWLYDYNSVDKIFPKPIREYNLDIWLAVLRAVQFTCRNMETKYTNQKLFLGYSATLTIIENICMSEDERRRNLQEDQWIRYASILCDRCEEIVPEISLARKIFVCAVRDVFEGALLPTFDVPDLDDCLNLIREQKTRSDDKVLESIGLLKLAVTYKVLLIESKILLIDNSRISLLNNLARLSVFDNRTYILQLMKPFLLSAIMNMERKAKADAVAADLALEEEKKPQSKKKNDKINKHRASTSKSSPFDQTVEHKPPVNLELKTVEEDSMEPENALASENGPLESSSKTQNQEEATKDGPAEMLDMPKEDSLSAHSESAIGGAAARYNSALDMTLKALLNIKVLKEDLKNNTQRFQQVPSALQHFFNAFVSESIKTEGVYSCILSDLLSSLEEVISKSSDAAKVVVAILEFWFCWKNPEGESLVTRLFTLAENERMSCRKCRWITNYPEKSSYTIVMPADSIRQLKCAFESMKFVDILKVIRMEYQKSCDIKTGGCGESNFVHHFISRCPPVFTIVLEWEKSETEKEISETTKALDLELDISRLYVGLEPNTNYRLVSMVGCGEEEEHICLAYENNRWVNLGRESLAGEDVSHWKSAVIFFGDFKVNLREESLSGEDDGNWKSVVSFFGERKIRPEILFYEAVGSMA", "length": 1136, "header": "tr|Q9SSP9-1|Q9SSP9_ARATH Isoform 1 of Ubiquitin carboxyl-terminal hydrolase-related protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9SSP9-1" }, "locus": { "chromosome": "1", "start_pos": 19541684, "end_pos": 19546357, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT1G52450.1", "url": "https://www.ensemblgenomes.org/id/AT1G52450.1" }, { "database": "Ensembl Peptide", "id": "AT1G52450.1", "url": "https://www.ensemblgenomes.org/id/AT1G52450.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Theologis A, Ecker J R, Palm C J, Federspiel N A, Kaul S, White O, Alonso J, Altafi H, Araujo R, Bowman C L, Brooks S Y, Buehler E, Chan A, Chao Q, Chen H, Cheuk R F, Chin C W, Chung M K, Conn L, Conway A B, Conway A R, Creasy T H, Dewar K, Dunn P, Etgu P, Feldblyum T V, Feng J, Fong B, Fujii C Y, Gill J E, Goldsmith A D, Haas B, Hansen N F, Hughes B, Huizar L, Hunter J L, Jenkins J, Johnson-Hopson C, Khan S, Khaykin E, Kim C J, Koo H L, Kremenetskaia I, Kurtz D B, Kwan A, Lam B, Langin-Hooper S, Lee A, Lee J M, Lenz C A, Li J H, Li Y, Lin X, Liu S X, Liu Z A, Luros J S, Maiti R, Marziali A, Militscher J, Miranda M, Nguyen M, Nierman W C, Osborne B I, Pai G, Peterson J, Pham P K, Rizzo M, Rooney T, Rowley D, Sakano H, Salzberg S L, Schwartz J R, Shinn P, Southwick A M, Sun H, Tallon L J, Tambunga G, Toriumi M J, Town C D, Utterback T, Van Aken S, Vaysberg M, Vysotskaia V S, Walker M, Wu D, Yu G, Fraser C M, Venter J C, Davis R W", "evidence": [ { "database": "UniProtKB", "id": "Q9SSP9", "url": "https://www.uniprot.org/uniprotkb/Q9SSP9" } ], "reference": [ { "type": "PubMed", "id": "11130712", "url": "https://glygen.org/publication/PubMed/11130712" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9SSP9", "url": "https://www.uniprot.org/uniprotkb/Q9SSP9" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT1G52450", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT1G52450", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q9SSP9", "url": "https://www.uniprot.org/uniprotkb/Q9SSP9" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "protein deubiquitination", "id": "GO:0016579", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016579", "evidence": [ { "database": "UniProtKB", "id": "Q9SSP9", "url": "https://www.uniprot.org/uniprotkb/Q9SSP9" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "cysteine-type deubiquitinase activity", "id": "GO:0004843", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004843", "evidence": [ { "database": "UniProtKB", "id": "Q9SSP9", "url": "https://www.uniprot.org/uniprotkb/Q9SSP9" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 675, "end_pos": 677, "annotation": "n_glycosylation_sequon" }, { "start_pos": 839, "end_pos": 841, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "Q9SSP9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SSP9" }, { "id": "PF04781", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF04781" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "DUF627", "eco_id": "ECO_0000259", "start_pos": 15, "end_pos": 121, "start_aa": "Asp", "end_aa": "Thr", "glycosite_overlap": [] }, { "evidence": [ { "id": "Q9SSP9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SSP9" }, { "id": "PF04780", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF04780" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "DUF629", "eco_id": "ECO_0000259", "start_pos": 188, "end_pos": 646, "start_aa": "Arg", "end_aa": "Val", "glycosite_overlap": [] }, { "evidence": [ { "id": "Q9SSP9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SSP9" }, { "id": "PF00443", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00443" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Peptidase C19 ubiquitin carboxyl-terminal hydrolase", "eco_id": "ECO_0000259", "start_pos": 810, "end_pos": 1087, "start_aa": "Gly", "end_aa": "Val", "glycosite_overlap": [] } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 675, "end_pos": 677 }, { "start_pos": 839, "end_pos": 841 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "Q9SSQ0-1", "uniprot_ac": "Q9SSQ0", "uniprot_id": "Q9SSQ0_ARATH", "mass": { "chemical_mass": 25569.0, "monoisotopic_mass": 25569.0 }, "refseq": {}, "gene_names": [ { "name": "F6D8.32", "type": "synonym", "evidence": [ { "id": "Q9SSQ0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SSQ0" } ] }, { "name": "F6D8_32", "type": "synonym", "evidence": [ { "id": "Q9SSQ0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SSQ0" } ] } ], "protein_names": [ { "name": "Alpha/beta-Hydrolases superfamily protein", "type": "synonym", "evidence": [ { "id": "Q9SSQ0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SSQ0/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9SSQ0", "url": "https://www.uniprot.org/uniprotkb/Q9SSQ0" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9SSQ0", "locus": {} } ], "crossref": [ { "id": "AT1G52460", "url": "https://bar.utoronto.ca/thalemine/portal.do?externalids=AT1G52460", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "841677", "url": "https://www.ncbi.nlm.nih.gov/gene/841677", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR029058", "url": "https://www.ebi.ac.uk/interpro/entry/IPR029058", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT1G52460", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT1G52460", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "HENSYIS", "url": "https://omabrowser.org/oma/group/HENSYIS/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR46234", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR46234", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "AT1G52460", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT1G52460", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9SSQ0", "url": "https://www.uniprot.org/uniprotkb/Q9SSQ0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9SSQ0-1", "url": "https://www.uniprot.org/uniprotkb/Q9SSQ0-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MAASSSSNRADFVVQPKGEHRVTIVWLHDKDEHFSDSVQFVKILNLNNIKWICPSLVLPTSRNKPEYNINHALYLTAERVANLFSDEPENVIKGVGGFGMGAAVALHFATSCALNHYTINPRVVVGISGWLSKAKSLKRSIEFASYEAPPRAASQSILLTHGQRDHVPHLCGCGEEAAFILREAGFRDVRFLPFARFGPIAHEINRNVMVKSWLEEKLPLDVVLAKECLP", "length": 230, "header": "tr|Q9SSQ0-1|Q9SSQ0_ARATH Isoform 1 of Alpha/beta-Hydrolases superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9SSQ0-1" }, "isoforms": [ { "isoform_ac": "Q9SSQ0-1", "url": "https://www.uniprot.org/uniprotkb/Q9SSQ0/entry", "sequence": { "sequence": 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"publication", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "Q9STF5-1", "uniprot_ac": "Q9STF5", "uniprot_id": "Q9STF5_ARATH", "mass": { "chemical_mass": 78930.0, "monoisotopic_mass": 78930.0 }, "refseq": { "ac": "NP_190265", "name": "Cysteine/Histidine-rich C1 domain family protein", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_190265" }, "gene_names": [], "protein_names": [ { "name": "Cysteine/Histidine-rich C1 domain family protein", "type": "synonym", "evidence": [ { "id": "NP_190265", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_190265" }, { "id": "Q9STF5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9STF5/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": 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"url": "https://www.ebi.ac.uk/interpro/entry/IPR004146", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR046349", "url": "https://www.ebi.ac.uk/interpro/entry/IPR046349", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR053192", "url": "https://www.ebi.ac.uk/interpro/entry/IPR053192", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR054483", "url": "https://www.ebi.ac.uk/interpro/entry/IPR054483", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT3G46810", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G46810", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "NYGHQHS", "url": "https://omabrowser.org/oma/group/NYGHQHS/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR32410", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR32410", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR32410:SF162", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR32410:SF162", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF03107", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF03107", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF22926", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF22926", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_190265", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_190265", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G46810", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G46810", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9STF5", "url": "https://www.uniprot.org/uniprotkb/Q9STF5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9STF5-1", "url": "https://www.uniprot.org/uniprotkb/Q9STF5-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MEKVVLRVHDHPLLPFERFYFGRCSGCSREGYFYGGYRCNELACFAVFHKECAESKPEISHHAHPKHLLKLGNRRQRCHLCERPVGIGYFCSICDFGMHLVCAKSPPLSLQPQLSSIENYKVHEHPLKPFKTAWLAETGNCKGCNYIIGNGDSAPFYECRRCKLYIHVTCLELFFTTDARHNSHLKHPLKYLKNGPPSYADHKCLLCGREFEDQQGQKYELYHCDVCNFSICISCQGNPPPLVVVTPKTHEHQLHLIPRLLDFTCNACGTQGDRSPYFCLQCNFMIHRGCIDLPRIININRHDHRISYICHLGQGNLKCGVCRKTVDGFYGAYSCSKCSSYVVHSLCATRKDVWDMVELEGTPEEEEIAPFEVVDENTIKHMSHDHDLIFNNDGINLHESKLCEACVSQINTDPFYSCELCGFILHQTCANMPRKKRHVLCNIPFSLQTDDSKDSSRLRRKCSLCLQHFTGFAYNLHIAYNSRTEVMDIRCGSIFEPFVHERHPHPLYYKFFTFSAVAKCDICHITRRHLLCCEECDFRLDFRCATLPKKVMKQRYDDHPLFLSYGENNVDGEYWCDVCEKRVDAKTWFYTCDACGVTLHVSCVVGDFSYHMPGPLSTVVSEYKMVPPAVVSLYKVVPNTSICRPLCSRCHTRCKLPCILETSEDGVNVYFCSNDCHKNPWESSYY", "length": 686, "header": "tr|Q9STF5-1|Q9STF5_ARATH Isoform 1 of Cysteine/Histidine-rich C1 domain family protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9STF5-1" }, "isoforms": [ { "isoform_ac": "Q9STF5-1", "url": "https://www.uniprot.org/uniprotkb/Q9STF5/entry", "sequence": { "sequence": "MEKVVLRVHDHPLLPFERFYFGRCSGCSREGYFYGGYRCNELACFAVFHKECAESKPEISHHAHPKHLLKLGNRRQRCHLCERPVGIGYFCSICDFGMHLVCAKSPPLSLQPQLSSIENYKVHEHPLKPFKTAWLAETGNCKGCNYIIGNGDSAPFYECRRCKLYIHVTCLELFFTTDARHNSHLKHPLKYLKNGPPSYADHKCLLCGREFEDQQGQKYELYHCDVCNFSICISCQGNPPPLVVVTPKTHEHQLHLIPRLLDFTCNACGTQGDRSPYFCLQCNFMIHRGCIDLPRIININRHDHRISYICHLGQGNLKCGVCRKTVDGFYGAYSCSKCSSYVVHSLCATRKDVWDMVELEGTPEEEEIAPFEVVDENTIKHMSHDHDLIFNNDGINLHESKLCEACVSQINTDPFYSCELCGFILHQTCANMPRKKRHVLCNIPFSLQTDDSKDSSRLRRKCSLCLQHFTGFAYNLHIAYNSRTEVMDIRCGSIFEPFVHERHPHPLYYKFFTFSAVAKCDICHITRRHLLCCEECDFRLDFRCATLPKKVMKQRYDDHPLFLSYGENNVDGEYWCDVCEKRVDAKTWFYTCDACGVTLHVSCVVGDFSYHMPGPLSTVVSEYKMVPPAVVSLYKVVPNTSICRPLCSRCHTRCKLPCILETSEDGVNVYFCSNDCHKNPWESSYY", "length": 686, "header": "tr|Q9STF5-1|Q9STF5_ARATH Isoform 1 of Cysteine/Histidine-rich C1 domain family protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9STF5-1" }, "locus": { "chromosome": "3", "start_pos": 17238231, "end_pos": 17240623, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G46810.1", "url": "https://www.ensemblgenomes.org/id/AT3G46810.1" }, { "database": "Ensembl Peptide", "id": "AT3G46810.1", "url": "https://www.ensemblgenomes.org/id/AT3G46810.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9STF5", "url": "https://www.uniprot.org/uniprotkb/Q9STF5" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9STF5", "url": "https://www.uniprot.org/uniprotkb/Q9STF5" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G46810", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G46810", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q9STF5", "url": "https://www.uniprot.org/uniprotkb/Q9STF5" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "zinc ion binding", "id": "GO:0008270", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008270", "evidence": [ { "database": "UniProtKB", "id": "Q9STF5", "url": "https://www.uniprot.org/uniprotkb/Q9STF5" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 228, "end_pos": 230, "annotation": "n_glycosylation_sequon" }, { "start_pos": 639, "end_pos": 641, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "Q9STF5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9STF5" }, { "id": "SM00109", "database": "SMART", "url": "http://smart.embl.de/smart/do_annotation.pl?DOMAIN=SM00109" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Phorbol-ester/DAG-type", "eco_id": "ECO_0000259", "start_pos": 59, "end_pos": 108, "start_aa": "Ile", "end_aa": "Leu", "glycosite_overlap": [] }, { "evidence": [ { "id": "Q9STF5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9STF5" }, { "id": "SM00249", "database": "SMART", "url": "http://smart.embl.de/smart/do_annotation.pl?DOMAIN=SM00249" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Zinc finger PHD-type", "eco_id": "ECO_0000259", "start_pos": 77, "end_pos": 163, "start_aa": "Arg", "end_aa": "Lys", "glycosite_overlap": [] } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 228, "end_pos": 230 }, { "start_pos": 639, "end_pos": 641 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", 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0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "Q9STF8-1", "uniprot_ac": "Q9STF8", "uniprot_id": "Q9STF8_ARATH", "mass": { "chemical_mass": 9573.0, "monoisotopic_mass": 9573.0 }, "refseq": { "ac": "NP_190270", "name": "Serine protease inhibitor, potato inhibitor I-type family protein", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_190270" }, "gene_names": [], "protein_names": [ { "name": "Serine protease inhibitor, potato inhibitor I-type family protein", "type": "synonym", "evidence": [ { "id": "NP_190270", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_190270" }, { "id": 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"Protein" ] } ], "sequence": { "sequence": "MAISNGAVEFLRRRLLPTTLIHVTAIDGIVNVNSLFSLALFLGLTTSGNITFPVSSSASENHHLRRCISAKGPALAERLVSSHVYSFSLFLFSSLIAMSLKQAIRTTTTTTNGNCLEEEARVLNAGEGRVNLAALRVGIVASCVASVLGCGFLTMALVDLVQIKLGPLECKRSFHALAAIVPLVVLVPSALIIYVFLVLYAFIY", "length": 204, "header": "tr|Q9STG1-1|Q9STG1_ARATH Isoform 1 of Maternal effect embryo arrest protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9STG1-1" }, "isoforms": [ { "isoform_ac": "Q9STG1-1", "url": "https://www.uniprot.org/uniprotkb/Q9STG1/entry", "sequence": { "sequence": "MAISNGAVEFLRRRLLPTTLIHVTAIDGIVNVNSLFSLALFLGLTTSGNITFPVSSSASENHHLRRCISAKGPALAERLVSSHVYSFSLFLFSSLIAMSLKQAIRTTTTTTNGNCLEEEARVLNAGEGRVNLAALRVGIVASCVASVLGCGFLTMALVDLVQIKLGPLECKRSFHALAAIVPLVVLVPSALIIYVFLVLYAFIY", "length": 204, "header": "tr|Q9STG1-1|Q9STG1_ARATH Isoform 1 of Maternal effect embryo arrest protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9STG1-1" }, "locus": { "chromosome": "3", "start_pos": 17266341, "end_pos": 17267128, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G46890.1", "url": "https://www.ensemblgenomes.org/id/AT3G46890.1" }, { "database": "Ensembl Peptide", "id": "AT3G46890.1", "url": "https://www.ensemblgenomes.org/id/AT3G46890.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, 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"ath:AT3G46950", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G46950", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "IVTTYPR", "url": "https://omabrowser.org/oma/group/IVTTYPR/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR13068", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR13068", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR13068:SF159", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR13068:SF159", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF02536", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF02536", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_190279", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_190279", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G46950", "url": 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family protein OS=Arabidopsis thaliana OX=3702 GN=MTERF33 PE=1 SV=1 CANONICAL=Q9STG7-1" }, "isoforms": [ { "isoform_ac": "Q9STG7-1", "url": "https://www.uniprot.org/uniprotkb/Q9STG7/entry", "sequence": { "sequence": "MFSLILHGRKSVELQKWRNLRVTVSIVQNAFPFTTKSFSSTIAKDSSPKGSTFTVSYLVESLGLTKKLAETISKKVTFEDKVNPDSVLNLLRSNGFKDSQISRIIRAYPRLLVTDAEKSLRPKLQFLKSRGASSSEVIEIVSNVPTILDKKGEESVSLYYDFVKDIMQDGKSLCISCPEGKKGNRIRNISVLRELGVPQKLLFSLLISRYQPVCGKEKFEESLKKVVDMGFDPAKSKFVEALHVVYEMSEKTIEEKVNVYKRLGFSEAEIWAIFKKWPYFLKFSEKKIILMFETLKKCGLVEEEIISVLKSRPQCIRSSEQKILDSIEMFLGLGFSRDDFKMMVKRYPCCTAYSGETLRKKFEVLVKMMNWPLEAVVMIPTVLGYSLEKRIVPRSNVIKALMSKGLIGSENPPISSVLVCTDQEFLKRYVMKHDKLVPKLMAIFNRGRVS", "length": 450, "header": "tr|Q9STG7-1|Q9STG7_ARATH Isoform 1 of Mitochondrial transcription termination factor family protein OS=Arabidopsis thaliana OX=3702 GN=MTERF33 PE=1 SV=1 CANONICAL=Q9STG7-1" }, "locus": { "chromosome": "3", "start_pos": 17289369, "end_pos": 17290963, "strand": "+", "evidence": [ { "database": "Ensembl 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"https://www.uniprot.org/uniprotkb/Q9STH3" } ] } ], "protein_names": [ { "name": "Uncharacterized protein", "type": "synonym", "evidence": [ { "id": "Q9STH3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9STH3/entry#names_and_taxonomy" } ] }, { "name": "uncharacterized protein", "type": "synonym", "evidence": [ { "id": "NP_192975", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_192975" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9STH3", "url": "https://www.uniprot.org/uniprotkb/Q9STH3" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9STH3", "locus": {} } ], "crossref": [ { "id": "AT4G12380", "url": "https://bar.utoronto.ca/thalemine/portal.do?externalids=AT4G12380", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "826847", "url": "https://www.ncbi.nlm.nih.gov/gene/826847", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "ath:AT4G12380", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT4G12380", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "NP_192975", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_192975", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT4G12380", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT4G12380", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9STH3", "url": "https://www.uniprot.org/uniprotkb/Q9STH3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9STH3-1", "url": "https://www.uniprot.org/uniprotkb/Q9STH3-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], 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"https://www.ensemblgenomes.org/id/AT4G12380.1" }, { "database": "Ensembl Peptide", "id": "AT4G12380.1", "url": "https://www.ensemblgenomes.org/id/AT4G12380.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "1999", "authors": "Mayer K, Sch\u00fcller C, Wambutt R, Murphy G, Volckaert G, Pohl T, D\u00fcsterh\u00f6ft A, Stiekema W, Entian K D, Terryn N, Harris B, Ansorge W, Brandt P, Grivell L, Rieger M, Weichselgartner M, de Simone V, Obermaier B, Mache R, M\u00fcller M, Kreis M, Delseny M, Puigdomenech P, Watson M, Schmidtheini T, Reichert B, Portatelle D, Perez-Alonso M, Boutry M, Bancroft I, Vos P, Hoheisel J, Zimmermann W, Wedler H, Ridley P, Langham S A, McCullagh B, Bilham L, Robben J, Van der Schueren J, Grymonprez B, Chuang Y J, Vandenbussche F, Braeken M, Weltjens I, Voet M, Bastiaens I, Aert R, Defoor E, 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"database": "UniProtKB", "id": "Q9STH3", "url": "https://www.uniprot.org/uniprotkb/Q9STH3" } ], "reference": [ { "type": "PubMed", "id": "10617198", "url": "https://glygen.org/publication/PubMed/10617198" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9STH3", "url": "https://www.uniprot.org/uniprotkb/Q9STH3" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT4G12380", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT4G12380", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "Q9STH3", "url": "https://www.uniprot.org/uniprotkb/Q9STH3" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 75, "end_pos": 77, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 75, "end_pos": 77 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", 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cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9STH4", "locus": {} } ], "crossref": [ { "id": "AT4G12370", "url": "https://bar.utoronto.ca/thalemine/portal.do?externalids=AT4G12370", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "826846", "url": "https://www.ncbi.nlm.nih.gov/gene/826846", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR005174", "url": "https://www.ebi.ac.uk/interpro/entry/IPR005174", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT4G12370", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT4G12370", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "PWMRNSV", "url": "https://omabrowser.org/oma/group/PWMRNSV/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR33127", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR33127", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR33127:SF42", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR33127:SF42", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF03478", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF03478", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "AT4G12370", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT4G12370", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9STH4", "url": "https://www.uniprot.org/uniprotkb/Q9STH4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9STH4-1", "url": "https://www.uniprot.org/uniprotkb/Q9STH4-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MYLPKRGNLFELYDPLHQKMYTLNLPELAKSTVCYSRDGWLLMRKTISREMFFFNPFTRELINVPKCTLSYDAIAFSCAPTSGTCVLLAFKHVSYRITTTSTCHPKATEWVTEDLQFHRRFRSETLNHSNVVYAKRRFYCLDGQGSLYYFDPSSRRWDFSYTYLLPCPYISDRFSYQYERKKKRIFLAVRKGVFFKIFTCDGEKPIVHKLEDINWEEINSTTIDGLTIFTGLYSSEVRLNLPWMRNSVYFPRLRFNVKRCVSYSLDEERYYPRKQWQEQEDLCPIENLWIRPPKKAVDFM", "length": 300, "header": "tr|Q9STH4-1|Q9STH4_ARATH Isoform 1 of F-box/kelch-repeat protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9STH4-1" }, "isoforms": [ { "isoform_ac": "Q9STH4-1", "url": "https://www.uniprot.org/uniprotkb/Q9STH4/entry", "sequence": { "sequence": "MYLPKRGNLFELYDPLHQKMYTLNLPELAKSTVCYSRDGWLLMRKTISREMFFFNPFTRELINVPKCTLSYDAIAFSCAPTSGTCVLLAFKHVSYRITTTSTCHPKATEWVTEDLQFHRRFRSETLNHSNVVYAKRRFYCLDGQGSLYYFDPSSRRWDFSYTYLLPCPYISDRFSYQYERKKKRIFLAVRKGVFFKIFTCDGEKPIVHKLEDINWEEINSTTIDGLTIFTGLYSSEVRLNLPWMRNSVYFPRLRFNVKRCVSYSLDEERYYPRKQWQEQEDLCPIENLWIRPPKKAVDFM", "length": 300, "header": "tr|Q9STH4-1|Q9STH4_ARATH Isoform 1 of F-box/kelch-repeat protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9STH4-1" }, "locus": { "chromosome": "4", "start_pos": 7331965, "end_pos": 7332982, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT4G12370.1", "url": "https://www.ensemblgenomes.org/id/AT4G12370.1" }, { "database": "Ensembl Peptide", "id": "AT4G12370.1", "url": "https://www.ensemblgenomes.org/id/AT4G12370.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "1999", "authors": "Mayer K, Sch\u00fcller C, Wambutt R, Murphy G, Volckaert G, Pohl T, D\u00fcsterh\u00f6ft A, Stiekema W, Entian K D, Terryn N, Harris B, Ansorge W, Brandt P, Grivell L, Rieger M, Weichselgartner M, de Simone V, Obermaier B, Mache R, M\u00fcller M, Kreis M, Delseny M, Puigdomenech P, Watson M, Schmidtheini T, Reichert B, Portatelle D, Perez-Alonso M, Boutry M, Bancroft I, Vos P, 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"categories": [ "Protein Classification" ] }, { "id": "PF00561", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00561", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "AT4G12230", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT4G12230", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9STI8", "url": "https://www.uniprot.org/uniprotkb/Q9STI8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9STI8-1", "url": "https://www.uniprot.org/uniprotkb/Q9STI8-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MKGVSSTPGDYVYFKSQVPLHKIPIGTKQWRYYDFGPKTVPPLICIPGIAGTADVYYKQIMALSMKGYRVISVDIPRVWNYHEWIQAFEKFLDTIDVHHVHLYGTSLGGFLAQLFAHHRPRRVKSLVLSNTYLDTRTFATAMPWAPFVSWTPSFLLKRYVLTGIRDGPHEPFIADSVDFAVSQVETLSKDDLASRLTLTVDAASVGSLLLSDSSVTIMDTNDYCAIPQHLKDELTERYPEARRAYLKSGGDFPFLSRPDEVNLHLQLHLRRVGVEPRPEVVKSIPKGGADGTDGSSQSKKKSDEEKDDRNNNMPQDSGSSSSDQSPTFPESSGSSNDPPLPTDTIQLLSSSLNNLILVQLAGEVYQSCVVFTLCYCTLVLVHGGGFISRQLV", "length": 392, "header": "tr|Q9STI8-1|Q9STI8_ARATH Isoform 1 of Maspardin OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9STI8-1" }, "isoforms": [ { "isoform_ac": "Q9STI8-1", "url": "https://www.uniprot.org/uniprotkb/Q9STI8/entry", "sequence": { "sequence": "MKGVSSTPGDYVYFKSQVPLHKIPIGTKQWRYYDFGPKTVPPLICIPGIAGTADVYYKQIMALSMKGYRVISVDIPRVWNYHEWIQAFEKFLDTIDVHHVHLYGTSLGGFLAQLFAHHRPRRVKSLVLSNTYLDTRTFATAMPWAPFVSWTPSFLLKRYVLTGIRDGPHEPFIADSVDFAVSQVETLSKDDLASRLTLTVDAASVGSLLLSDSSVTIMDTNDYCAIPQHLKDELTERYPEARRAYLKSGGDFPFLSRPDEVNLHLQLHLRRVGVEPRPEVVKSIPKGGADGTDGSSQSKKKSDEEKDDRNNNMPQDSGSSSSDQSPTFPESSGSSNDPPLPTDTIQLLSSSLNNLILVQLAGEVYQSCVVFTLCYCTLVLVHGGGFISRQLV", "length": 392, "header": "tr|Q9STI8-1|Q9STI8_ARATH Isoform 1 of Maspardin OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9STI8-1" }, "locus": { "chromosome": "4", "start_pos": 7284474, "end_pos": 7287578, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT4G12230.1", "url": "https://www.ensemblgenomes.org/id/AT4G12230.1" }, { "database": "Ensembl Peptide", "id": "AT4G12230.1", "url": "https://www.ensemblgenomes.org/id/AT4G12230.1" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "other", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 7, "start_aa": "Thr", "end_pos": 7, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr7", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ], "filter_code": "000000000000000010000.00000000001000.0.01000" } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "1999", "authors": "Mayer K, Sch\u00fcller C, Wambutt R, Murphy G, Volckaert G, Pohl T, D\u00fcsterh\u00f6ft A, Stiekema W, Entian K D, Terryn N, Harris B, Ansorge W, Brandt P, Grivell L, Rieger M, Weichselgartner M, de Simone V, Obermaier B, Mache R, M\u00fcller M, Kreis M, Delseny M, Puigdomenech P, Watson M, Schmidtheini T, Reichert B, Portatelle D, Perez-Alonso M, Boutry M, Bancroft I, Vos P, Hoheisel J, Zimmermann W, Wedler H, Ridley P, Langham S A, McCullagh B, Bilham L, Robben J, Van der Schueren J, Grymonprez B, Chuang Y J, Vandenbussche F, Braeken M, Weltjens I, Voet M, Bastiaens I, Aert R, Defoor E, Weitzenegger T, Bothe G, Ramsperger U, Hilbert H, Braun M, Holzer E, Brandt A, Peters S, van Staveren M, Dirske W, Mooijman P, Klein Lankhorst R, Rose M, Hauf J, K\u00f6tter P, Berneiser S, Hempel S, Feldpausch M, Lamberth S, Van den Daele H, De Keyser A, Buysshaert C, Gielen J, Villarroel R, De Clercq R, Van Montagu M, Rogers J, Cronin A, Quail M, Bray-Allen S, Clark L, Doggett J, Hall S, Kay M, Lennard N, McLay K, Mayes R, Pettett A, Rajandream M A, Lyne M, Benes V, Rechmann S, Borkova D, Bl\u00f6cker H, Scharfe M, Grimm M, L\u00f6hnert T H, Dose S, de Haan M, Maarse A, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Fartmann B, Granderath K, Dauner D, Herzl A, Neumann S, Argiriou A, Vitale D, Liguori R, Piravandi E, Massenet O, Quigley F, Clabauld G, M\u00fcndlein A, Felber R, Schnabl S, Hiller R, Schmidt W, Lecharny A, Aubourg S, Chefdor F, Cooke R, Berger C, Montfort A, Casacuberta E, Gibbons T, Weber N, Vandenbol M, Bargues M, Terol J, Torres A, Perez-Perez A, Purnelle B, Bent E, Johnson S, Tacon D, Jesse T, Heijnen L, Schwarz S, Scholler P, Heber S, Francs P, Bielke C, Frishman D, Haase D, Lemcke K, Mewes H W, Stocker S, Zaccaria P, Bevan M, Wilson R K, de la Bastide M, Habermann K, Parnell L, Dedhia N, Gnoj L, Schutz K, Huang E, Spiegel L, Sehkon M, Murray J, Sheet P, Cordes M, Abu-Threideh J, Stoneking T, Kalicki J, Graves T, Harmon G, Edwards J, Latreille P, Courtney L, Cloud J, Abbott A, Scott K, Johnson D, Minx P, Bentley D, Fulton B, Miller N, Greco T, Kemp K, Kramer J, Fulton L, Mardis E, Dante M, Pepin K, Hillier L, Nelson J, Spieth J, Ryan E, Andrews S, Geisel C, Layman D, Du H, Ali J, Berghoff A, Jones K, Drone K, Cotton M, Joshu C, Antonoiu B, Zidanic M, Strong C, Sun H, Lamar B, Yordan C, Ma P, Zhong J, Preston R, Vil D, Shekher M, Matero A, Shah R, Swaby I K, O'Shaughnessy A, Rodriguez M, Hoffmann J, Till S, Granat S, Shohdy N, Hasegawa A, Hameed A, Lodhi M, Johnson A, Chen E, Marra M, Martienssen R, McCombie W R", "evidence": [ { "database": "UniProtKB", "id": "Q9STI8", "url": "https://www.uniprot.org/uniprotkb/Q9STI8" } ], "reference": [ { "type": "PubMed", "id": "10617198", "url": "https://glygen.org/publication/PubMed/10617198" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9STI8", "url": "https://www.uniprot.org/uniprotkb/Q9STI8" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT4G12230", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT4G12230", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A4X1U0H4-1", "protein_name": "Maspardin", "gene_name": "SPG21", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MGEIKVSPDYNWFRSTVPLKKIIVDDDDSKIWSLYDAGPRNIRCPLIFLPPVSGTADVFFRQILALTGWGYRVIALQYPVYWDHLEFCDGFRKLLDHLQLDKVHLFGASLGGFLAQKFAEYTHKSPRVQSLILCNAFSDTSIFNQTWTANSFWLMPSFMLKKIVLGNFSSGPVDPMMADAIDFMVDRLESLGQSELASRLTLNCQNSYVEPHKIRDIPVTIMDVFDQSALSTEAKEEMYKLYPNARRAHLKTGGNFPYLCRSAEVNLYVQIHLLQFHGTKYAAIDPSMVSAEELEVQKGNLGISQEEQ", "length": 308 }, "evidence": [ { "id": "Q9STI8", "url": "https://omabrowser.org/oma/group/Q9STI8/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "E1C0Z8-1", "protein_name": "Maspardin", "gene_name": "SPG21", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MGEIKVSPDYNWFRSTVPLKKIIVDDDDSKVWSLYDAGPRSIRCPLIFLPPVSGTADVFFQQILALTGWGYRVIALQYPVYWDHLEFCDGFRKLLDHLQLDKVHLFGASLGGFLAQKFAEYTHKSPRVQSLILCNAFSDTSIFNQTWTANSFWLMPAFMLKKIVLGNFASGPVDPEMADGIDFMVDRLESLGQSELASRLTLNCQNSYVEPHKIRDIPVTIMDVFDQSALSTEAKEEMYKLYPNARRAHLKTGGNFPYLCRSAEVNLYIQIHLLQFHGTRYAAIDPSMVSAEELEVQKISLHTSSEQEEQ", "length": 310 }, "evidence": [ { "id": "Q9STI8", "url": "https://omabrowser.org/oma/group/Q9STI8/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "G3HUZ3-1", "protein_name": "Maspardin", "gene_name": "Spg21", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MGEIKVSPDYNWFRSTVPLKKIIVDDDDSKIWSLYDAGPRSIRCPLIFLPPVSGTADVFFQQILALTGWGYRVIALQYPVYWDHLEFCDGFRKLLDHLQLDKVHLFGASLGGFLAQKFAEYTHKSPRVHSLILCNAFSDTSIFNQTWTANSFWLMPAFMLKKIVLGNFSSGPVDPMMADAIDFMVDRLESLGQSELASRLTLNCQNSYVEPHKIRDIPVTIMDVFDQSALSTEAKEEMYKLYPNARRAHLKTGGNFPYLCRSAEVNLYVQIHLLQFHGTKYAAIDPSVVSAEELEVQKGRLALSQEEP", "length": 308 }, "evidence": [ { "id": "Q9STI8", "url": "https://omabrowser.org/oma/group/Q9STI8/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "Q54I38-1", "protein_name": "Maspardin", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MSKLNQSDPYQLFRSWAPQNKISIGTLNEKIWKYYDYGPKDTNNAPIIFISHGSADIYFKQFLMLCPRGHRVISIQFSPYDTLSGWCKGFERFLDRLELDKPVHLFGSSLGGYLAQCFYQSKPSRVLSLILNNTFSDTQYFYDNSIGSSLFSLLPEFLLKKIILNNFPSGLLDNETREAVDFMVDQLETLNQNELASRLTLNCSPVSLLNPSGGLMDNITIIDCLDSTIPEKLREEVYKYYPNAKTALLKSGGDFSYLSRSDELNIHIEVHLRRFENLNNNNNNNNNNNNNNKDIKNNNEKQEVKIHQINNNNNNNNNNNNNNNNNNNNNIDKNNVNKIENNNNDIDIEGQNRISTTTISKNVSEATGKLNTSVFDNEDNDVFL", "length": 384 }, "evidence": [ { "id": "Q9STI8", "url": "https://omabrowser.org/oma/group/Q9STI8/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q5XIC4-1", "protein_name": 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"MKYCKVELRFINQRKLSPSQPNSVLVFIETKSEEIFVNPTTGHQTSRSTPASPSFFDTINLCSSSHHHIRSLLRSRFVSYHFLCDILAPEIATEAINLGFGRNGFTFTVVVTVTNRTVSVTSNDTEIIENGSTREDKSRGIKEFEHGNRVVFHLFPRSLQSET", "length": 163, "header": "tr|Q9STI9-1|Q9STI9_ARATH Isoform 1 of Uncharacterized protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9STI9-1" }, "isoforms": [ { "isoform_ac": "Q9STI9-1", "url": "https://www.uniprot.org/uniprotkb/Q9STI9/entry", "sequence": { "sequence": "MKYCKVELRFINQRKLSPSQPNSVLVFIETKSEEIFVNPTTGHQTSRSTPASPSFFDTINLCSSSHHHIRSLLRSRFVSYHFLCDILAPEIATEAINLGFGRNGFTFTVVVTVTNRTVSVTSNDTEIIENGSTREDKSRGIKEFEHGNRVVFHLFPRSLQSET", "length": 163, "header": "tr|Q9STI9-1|Q9STI9_ARATH Isoform 1 of Uncharacterized protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9STI9-1" }, "locus": { "chromosome": "4", "start_pos": 7283248, "end_pos": 7283739, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT4G12220.1", "url": "https://www.ensemblgenomes.org/id/AT4G12220.1" }, { 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"database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9STN1" } ] }, { "name": "T28D5_60", "type": "synonym", "evidence": [ { "id": "NP_192577", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_192577" }, { "id": "Q9STN1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9STN1" } ] } ], "protein_names": [ { "name": "Proline-rich extensin-like family protein", "type": "synonym", "evidence": [ { "id": "NP_192577", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_192577" }, { "id": "Q9STN1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9STN1/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9STN1", "url": "https://www.uniprot.org/uniprotkb/Q9STN1" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "EXT20", "url": "https://www.uniprot.org/uniprotkb/Q9STN1", "locus": {} } ], "crossref": [ { "id": "AT4G08370", "url": "https://bar.utoronto.ca/thalemine/portal.do?externalids=AT4G08370", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "826393", "url": "https://www.ncbi.nlm.nih.gov/gene/826393", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "ath:AT4G08370", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT4G08370", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "TSAQCKY", "url": "https://omabrowser.org/oma/group/TSAQCKY/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR36586", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR36586", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR36586:SF43", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR36586:SF43", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "NP_192577", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_192577", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT4G08370", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT4G08370", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9STN1", "url": "https://www.uniprot.org/uniprotkb/Q9STN1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9STN1-1", "url": "https://www.uniprot.org/uniprotkb/Q9STN1-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MVNPSNWPSLLMLVLAFYVVVVPTSAQCKYSPQSPPPQPYVYSPPLPSPYVYKSPPPSPYLYSSPPPPPYVYNSPPPPPPYIYNSPPRPPYVYKSPPPPPFVYSSPPPPTYIYNSPPPPPYVYKSVPRITFIYSSPPPPPYVYNSAPRIPFIYSSPPPPPYVYNSAPRVLFIYSSPPPPPYVYNSPPPPPYVYESVPRIPFIYSSPPPPPYVYNSAPRIPFIYSSPPPPPYVYNSAPRVPFIYSSPPPPPYVYKSVPRIPFIYSSPPPPPYVYNSAPRIPFIYSSLPPPPYVYNSAPRVPFIYSSPPPPPYVYNSAPRIPFIYSSPPPHHMFTSLFLIFHHLQLSTTPSI", "length": 350, "header": "tr|Q9STN1-1|Q9STN1_ARATH Isoform 1 of Proline-rich extensin-like family protein OS=Arabidopsis thaliana OX=3702 GN=EXT20 PE=4 SV=1 CANONICAL=Q9STN1-1" }, "isoforms": [ { "isoform_ac": "Q9STN1-1", "url": "https://www.uniprot.org/uniprotkb/Q9STN1/entry", "sequence": { "sequence": "MVNPSNWPSLLMLVLAFYVVVVPTSAQCKYSPQSPPPQPYVYSPPLPSPYVYKSPPPSPYLYSSPPPPPYVYNSPPPPPPYIYNSPPRPPYVYKSPPPPPFVYSSPPPPTYIYNSPPPPPYVYKSVPRITFIYSSPPPPPYVYNSAPRIPFIYSSPPPPPYVYNSAPRVLFIYSSPPPPPYVYNSPPPPPYVYESVPRIPFIYSSPPPPPYVYNSAPRIPFIYSSPPPPPYVYNSAPRVPFIYSSPPPPPYVYKSVPRIPFIYSSPPPPPYVYNSAPRIPFIYSSLPPPPYVYNSAPRVPFIYSSPPPPPYVYNSAPRIPFIYSSPPPHHMFTSLFLIFHHLQLSTTPSI", "length": 350, "header": "tr|Q9STN1-1|Q9STN1_ARATH Isoform 1 of Proline-rich extensin-like family protein OS=Arabidopsis thaliana OX=3702 GN=EXT20 PE=4 SV=1 CANONICAL=Q9STN1-1" }, "locus": { "chromosome": "4", "start_pos": 5301962, "end_pos": 5303314, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT4G08370.1", "url": "https://www.ensemblgenomes.org/id/AT4G08370.1" }, { "database": "Ensembl Peptide", "id": "AT4G08370.1", "url": "https://www.ensemblgenomes.org/id/AT4G08370.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "1999", "authors": "Mayer K, Sch\u00fcller C, Wambutt R, Murphy G, Volckaert G, Pohl T, D\u00fcsterh\u00f6ft A, Stiekema W, Entian K D, Terryn N, Harris B, Ansorge W, Brandt P, Grivell L, Rieger M, Weichselgartner M, de Simone V, Obermaier B, Mache R, M\u00fcller M, Kreis M, Delseny M, Puigdomenech P, Watson M, Schmidtheini T, Reichert B, Portatelle D, Perez-Alonso M, Boutry M, Bancroft I, Vos P, Hoheisel J, Zimmermann W, Wedler H, Ridley P, Langham S A, McCullagh B, Bilham L, Robben J, Van der Schueren J, Grymonprez B, Chuang Y J, Vandenbussche F, Braeken M, Weltjens I, Voet M, Bastiaens I, Aert R, Defoor E, Weitzenegger T, Bothe G, Ramsperger U, Hilbert H, Braun M, Holzer E, Brandt A, Peters S, van Staveren M, Dirske W, Mooijman P, Klein Lankhorst R, Rose M, Hauf J, K\u00f6tter P, Berneiser S, Hempel S, Feldpausch M, Lamberth S, Van den Daele H, De Keyser A, Buysshaert C, Gielen J, Villarroel R, De Clercq R, Van Montagu M, Rogers J, Cronin A, Quail M, Bray-Allen S, Clark L, Doggett J, Hall S, Kay M, Lennard N, McLay K, Mayes R, Pettett A, Rajandream M A, Lyne M, Benes V, Rechmann S, Borkova D, Bl\u00f6cker H, Scharfe M, Grimm M, L\u00f6hnert T H, Dose S, de Haan M, Maarse A, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Fartmann B, Granderath K, Dauner D, Herzl A, Neumann S, Argiriou A, Vitale D, Liguori R, Piravandi E, Massenet O, Quigley F, Clabauld G, M\u00fcndlein A, Felber R, Schnabl S, Hiller R, Schmidt W, Lecharny A, Aubourg S, Chefdor F, Cooke R, Berger C, Montfort A, Casacuberta E, Gibbons T, Weber N, Vandenbol M, Bargues M, Terol J, Torres A, Perez-Perez A, Purnelle B, Bent E, Johnson S, Tacon D, Jesse T, Heijnen L, Schwarz S, Scholler P, Heber S, Francs P, Bielke C, Frishman D, Haase D, Lemcke K, Mewes H W, Stocker S, Zaccaria P, Bevan M, Wilson R K, de la Bastide M, Habermann K, Parnell L, Dedhia N, Gnoj L, Schutz K, Huang E, Spiegel L, Sehkon M, Murray J, Sheet P, Cordes M, Abu-Threideh J, Stoneking T, Kalicki J, Graves T, Harmon G, Edwards J, Latreille P, Courtney L, Cloud J, Abbott A, Scott K, Johnson D, Minx P, Bentley D, Fulton B, Miller N, Greco T, Kemp K, Kramer J, Fulton L, Mardis E, Dante M, Pepin K, Hillier L, Nelson J, Spieth J, Ryan E, Andrews S, Geisel C, Layman D, Du H, Ali J, Berghoff A, Jones K, Drone K, Cotton M, Joshu C, Antonoiu B, Zidanic M, Strong C, Sun H, Lamar B, Yordan C, Ma P, Zhong J, Preston R, Vil D, Shekher M, Matero A, Shah R, Swaby I K, O'Shaughnessy A, Rodriguez M, Hoffmann J, Till S, Granat S, Shohdy N, Hasegawa A, Hameed A, Lodhi M, Johnson A, Chen E, Marra M, Martienssen R, McCombie W R", "evidence": [ { "database": "UniProtKB", "id": "Q9STN1", "url": "https://www.uniprot.org/uniprotkb/Q9STN1" } ], "reference": [ { "type": "PubMed", "id": "10617198", "url": "https://glygen.org/publication/PubMed/10617198" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9STN1", "url": "https://www.uniprot.org/uniprotkb/Q9STN1" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT4G08370", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT4G08370", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "Q54VJ8-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKNKLINLLFSLILIFLSINASQSLGAHKTTVTPTPTPNITVTHTLAPNITVTPTSTPNITVTPTSTPNITVTPTSTPNITVTPTSTPNITVTPTSTPNITVTPTSTPNITVTPTSTPNITVTPTSTPNITVTPTSTPNITVTPTSTPNITVTPTSTPNITVTPTSTPNITVTPTSTPNITVTPTSTPNITVTPTSTPNITVTPTSTPNITVTPTSTPNITVTPTSTPNITDTPTSTPNITDTPTSTSNITIYF", "length": 254 }, "evidence": [ { "id": "Q9STN1", "url": "https://omabrowser.org/oma/group/Q9STN1/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" } ], "go_annotation": {}, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", 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{ "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "Q9STN2-1", "uniprot_ac": "Q9STN2", "uniprot_id": "Q9STN2_ARATH", 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"https://bar.utoronto.ca/thalemine/portal.do?externalids=AT4G24370", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "828539", "url": "https://www.ncbi.nlm.nih.gov/gene/828539", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "ath:AT4G24370", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT4G24370", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "IQWAMDA", "url": "https://omabrowser.org/oma/group/IQWAMDA/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "NP_567700", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_567700", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT4G24370", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT4G24370", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9STV7", "url": "https://www.uniprot.org/uniprotkb/Q9STV7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9STV7-1", "url": "https://www.uniprot.org/uniprotkb/Q9STV7-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MRRGGKEEDEVEQLLQAAQDEMILKLSVDSHTSRSSSDYLDPDLHSRFLALKSQKKKDQQQQQKQRPRMQPKSKDVVEETPEDLMLRFAALKTSLPSASSSSSVLLQDEIGEDGDEIGEDAEVDKLIQWAIDAARLDPSPSSDDEQSQNCDSDDENDSTRDVKP", "length": 164, "header": "tr|Q9STV7-1|Q9STV7_ARATH Isoform 1 of Uncharacterized protein OS=Arabidopsis thaliana OX=3702 GN=PROS PE=1 SV=1 CANONICAL=Q9STV7-1" }, "isoforms": [ { "isoform_ac": "Q9STV7-1", "url": "https://www.uniprot.org/uniprotkb/Q9STV7/entry", "sequence": { "sequence": "MRRGGKEEDEVEQLLQAAQDEMILKLSVDSHTSRSSSDYLDPDLHSRFLALKSQKKKDQQQQQKQRPRMQPKSKDVVEETPEDLMLRFAALKTSLPSASSSSSVLLQDEIGEDGDEIGEDAEVDKLIQWAIDAARLDPSPSSDDEQSQNCDSDDENDSTRDVKP", "length": 164, "header": "tr|Q9STV7-1|Q9STV7_ARATH Isoform 1 of Uncharacterized protein OS=Arabidopsis thaliana OX=3702 GN=PROS PE=1 SV=1 CANONICAL=Q9STV7-1" }, "locus": { "chromosome": "4", "start_pos": 12611396, "end_pos": 12612219, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT4G24370.1", "url": "https://www.ensemblgenomes.org/id/AT4G24370.1" }, { "database": "Ensembl Peptide", "id": "AT4G24370.1", "url": "https://www.ensemblgenomes.org/id/AT4G24370.1" } ] } } ], "glycosylation": [], "phosphorylation": [ { "start_pos": 36, "end_pos": 36, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9STV7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9STV7" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ], "site_lbl": "Ser36" }, { "start_pos": 53, "end_pos": 53, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9STV7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9STV7" }, { "database": "PubMed", "id": 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Strong C, Sun H, Lamar B, Yordan C, Ma P, Zhong J, Preston R, Vil D, Shekher M, Matero A, Shah R, Swaby I K, O'Shaughnessy A, Rodriguez M, Hoffmann J, Till S, Granat S, Shohdy N, Hasegawa A, Hameed A, Lodhi M, Johnson A, Chen E, Marra M, Martienssen R, McCombie W R", "evidence": [ { "database": "UniProtKB", "id": "Q9STW4", "url": "https://www.uniprot.org/uniprotkb/Q9STW4" } ], "reference": [ { "type": "PubMed", "id": "10617198", "url": "https://glygen.org/publication/PubMed/10617198" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9STW4", "url": "https://www.uniprot.org/uniprotkb/Q9STW4" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] }, { "title": 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"isoforms": [ { "isoform_ac": "Q9SU15-1", "url": "https://www.uniprot.org/uniprotkb/Q9SU15/entry", "sequence": { "sequence": "MVVEENQNQMMASIAGDSTVTANISEEDEAEEETTTNTWKTTKELLILHLSKKLLHGDLDFRIEAAKEIRKLLRKSPVKSSARSKLADAGVIPPLVPMLFSSNVDARHASLLALLNLAVRNERNKIEIVKAGAVPPLIQILKLHNASLRELATAAILTLSAAPANKAMIISSGVPPLLIQMLSSGTVQGKVDAVTALHNLSACKEYSAPILDAKAVYPLIHLLKECKKHSKFAEKATALVEMILSHSEDGRNAITSCEDGILTLVETVEDGSPLSIEHAVGALLSLCRSDRDKYRKLILKEGAIPGLLSSTVDGTSKSRDRARVLLDLLRETPREKEMTPLTLEKIVYGIAVQVDGAEKAAETAKKLLQDMVHRSMELSMKSIQHKAASCASIPDISSKSNS", "length": 402, "header": "tr|Q9SU15-1|Q9SU15_ARATH Isoform 1 of ARM repeat superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9SU15-1" }, "locus": { "chromosome": "4", "start_pos": 7484668, "end_pos": 7486829, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT4G12710.1", "url": "https://www.ensemblgenomes.org/id/AT4G12710.1" }, { "database": "Ensembl Peptide", "id": "AT4G12710.1", "url": "https://www.ensemblgenomes.org/id/AT4G12710.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "1999", "authors": "Mayer K, Sch\u00fcller C, Wambutt R, Murphy G, Volckaert G, Pohl T, D\u00fcsterh\u00f6ft A, Stiekema W, Entian K D, Terryn N, Harris B, Ansorge W, Brandt P, Grivell L, Rieger M, Weichselgartner M, de Simone V, Obermaier B, Mache R, M\u00fcller M, Kreis M, Delseny M, Puigdomenech P, Watson M, Schmidtheini T, Reichert B, Portatelle D, Perez-Alonso M, Boutry M, Bancroft I, Vos P, Hoheisel J, Zimmermann W, Wedler H, Ridley P, Langham S A, McCullagh B, Bilham L, Robben J, Van der Schueren J, Grymonprez B, Chuang Y J, Vandenbussche F, Braeken M, Weltjens I, Voet M, Bastiaens I, Aert R, Defoor E, Weitzenegger T, Bothe G, Ramsperger U, Hilbert H, Braun M, Holzer E, Brandt A, Peters S, van Staveren M, Dirske W, Mooijman P, Klein Lankhorst R, Rose M, Hauf J, K\u00f6tter P, Berneiser S, Hempel S, Feldpausch M, Lamberth S, Van den Daele H, De Keyser A, Buysshaert C, Gielen J, Villarroel R, De Clercq R, Van Montagu M, Rogers J, Cronin A, Quail M, Bray-Allen S, Clark L, Doggett J, Hall S, Kay M, Lennard N, McLay K, Mayes R, Pettett A, Rajandream M A, Lyne M, Benes V, Rechmann S, Borkova D, Bl\u00f6cker H, Scharfe M, Grimm M, L\u00f6hnert T H, Dose S, de Haan M, Maarse A, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Fartmann B, Granderath K, Dauner D, Herzl A, Neumann S, Argiriou A, Vitale D, Liguori R, Piravandi E, Massenet O, Quigley F, Clabauld G, M\u00fcndlein A, Felber R, Schnabl S, Hiller R, Schmidt W, Lecharny A, Aubourg S, Chefdor F, Cooke R, Berger C, Montfort A, Casacuberta E, Gibbons T, Weber N, Vandenbol M, Bargues M, Terol J, Torres A, Perez-Perez A, Purnelle B, Bent E, Johnson S, Tacon D, Jesse T, Heijnen L, Schwarz S, Scholler P, Heber S, Francs P, Bielke C, Frishman D, Haase D, Lemcke K, Mewes H W, Stocker S, Zaccaria P, Bevan M, Wilson R K, de la Bastide M, Habermann K, Parnell L, Dedhia N, Gnoj L, Schutz K, Huang E, Spiegel L, Sehkon M, Murray J, Sheet P, Cordes M, Abu-Threideh J, Stoneking T, Kalicki J, Graves T, Harmon G, Edwards J, Latreille P, Courtney L, Cloud J, Abbott A, Scott K, Johnson D, Minx P, Bentley D, Fulton B, Miller N, Greco T, Kemp K, Kramer J, Fulton L, Mardis E, Dante M, Pepin K, Hillier L, Nelson J, Spieth J, Ryan E, Andrews S, Geisel C, Layman D, Du H, Ali J, Berghoff A, Jones K, Drone K, Cotton M, Joshu C, Antonoiu B, Zidanic M, Strong C, Sun H, Lamar B, Yordan C, Ma P, Zhong J, Preston R, Vil D, Shekher M, Matero A, Shah R, Swaby I K, O'Shaughnessy A, Rodriguez M, Hoffmann J, Till S, Granat S, Shohdy N, Hasegawa A, Hameed A, Lodhi M, Johnson A, Chen E, Marra M, Martienssen R, McCombie W R", "evidence": [ { "database": "UniProtKB", "id": "Q9SU15", "url": "https://www.uniprot.org/uniprotkb/Q9SU15" } ], "reference": [ { "type": "PubMed", "id": "10617198", "url": "https://glygen.org/publication/PubMed/10617198" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9SU15", "url": "https://www.uniprot.org/uniprotkb/Q9SU15" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT4G12710", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT4G12710", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q9SU15", "url": "https://www.uniprot.org/uniprotkb/Q9SU15" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "Q9SU15", "url": "https://www.uniprot.org/uniprotkb/Q9SU15" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 145, "end_pos": 147, "annotation": "n_glycosylation_sequon" }, { "start_pos": 199, "end_pos": 201, "annotation": "n_glycosylation_sequon" }, { "start_pos": 23, "end_pos": 25, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "Q9SU15", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SU15" }, { "id": "PF25598", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF25598" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "U-box", "eco_id": "ECO_0000259", "start_pos": 193, "end_pos": 334, "start_aa": "Ala", "end_aa": "Arg", "glycosite_overlap": [] } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 145, "end_pos": 147 }, { "start_pos": 199, "end_pos": 201 }, { "start_pos": 23, "end_pos": 25 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "Q9SU16-1", "uniprot_ac": "Q9SU16", "uniprot_id": "Q9SU16_ARATH", "mass": { "chemical_mass": 63486.0, "monoisotopic_mass": 63486.0 }, "refseq": { "ac": "NP_193006", "name": "calcium ion-binding protein", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_193006" }, "gene_names": [ { "name": "T20K18.50", "type": "synonym", "evidence": [ { "id": "NP_193006", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_193006" }, { "id": "Q9SU16", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SU16" } ] }, { "name": "T20K18_50", "type": "synonym", "evidence": [ { "id": "NP_193006", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_193006" }, { "id": "Q9SU16", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SU16" } ] } ], "protein_names": [ { "name": "Calcium ion-binding protein", "type": "synonym", "evidence": [ { "id": "Q9SU16", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SU16/entry#names_and_taxonomy" } ] }, { "name": "calcium ion-binding protein", "type": "synonym", "evidence": [ { "id": "NP_193006", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_193006" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9SU16", "url": "https://www.uniprot.org/uniprotkb/Q9SU16" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9SU16", "locus": {} } ], "crossref": [ { "id": "AT4G12700", "url": "https://bar.utoronto.ca/thalemine/portal.do?externalids=AT4G12700", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "826882", "url": "https://www.ncbi.nlm.nih.gov/gene/826882", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR055502", "url": "https://www.ebi.ac.uk/interpro/entry/IPR055502", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR055503", "url": "https://www.ebi.ac.uk/interpro/entry/IPR055503", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT4G12700", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT4G12700", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "DATFKAD", "url": "https://omabrowser.org/oma/group/DATFKAD/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR31469", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31469", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR31469:SF2", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31469:SF2", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF23269", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF23269", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF23272", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF23272", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_193006", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_193006", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT4G12700", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT4G12700", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9SU16", "url": "https://www.uniprot.org/uniprotkb/Q9SU16", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9SU16-1", "url": "https://www.uniprot.org/uniprotkb/Q9SU16-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MSGRSAFSRTGGFRPENLGQNAVSLIGSIGFSVLVIGVVVFTIIAATYEPEDPLFHPSDKITTFLTSNSNATLKSDDSIVKTGEDFMAANQTAFGGFINIADVETSENDSDGNQLDCDTNIPIDCKDPEVFHLMMKATMEKFKDSHFYKFGKPVIVEGSSSSCDMAWRYRPKDGKAAAFYKDYRRFVIEKSGNCSVSVMGIGEYHSGVNARKRKRPGFRNSSGGKVDDFALPVVGEAVNDSLPVVESENVFKEGHYLVYSGGGDRCKSMNHFLWSFLCALGEAQYLNRTLVMDLTLCLSSVYTLSGQNEEGKDFRFYFDFEHLKEAASMLDQVQFWADWGKWYKKNGLKLHLVEDFRVTPMKLVDVKDTLIMRKFGTVEPDNYWYRVCEGETESVVQRPWNLLWKSKRLMEIVSAIASRLNWDYDAIHIERGDKARNKEVWPNLEKDTSPSSILSTLQDKIEQGRNLYIATNEPELSFFNPLKDKYKPHFLDEFKDLWDESSEWYSETTKLNGGNPVEFDGYMRASVDTEVFLRGKKQIETFNDLTNDCRDGIGTCNVAAS", "length": 561, "header": "tr|Q9SU16-1|Q9SU16_ARATH Isoform 1 of Calcium ion-binding protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SU16-1" }, "isoforms": [ { "isoform_ac": "Q9SU16-1", "url": "https://www.uniprot.org/uniprotkb/Q9SU16/entry", "sequence": { "sequence": "MSGRSAFSRTGGFRPENLGQNAVSLIGSIGFSVLVIGVVVFTIIAATYEPEDPLFHPSDKITTFLTSNSNATLKSDDSIVKTGEDFMAANQTAFGGFINIADVETSENDSDGNQLDCDTNIPIDCKDPEVFHLMMKATMEKFKDSHFYKFGKPVIVEGSSSSCDMAWRYRPKDGKAAAFYKDYRRFVIEKSGNCSVSVMGIGEYHSGVNARKRKRPGFRNSSGGKVDDFALPVVGEAVNDSLPVVESENVFKEGHYLVYSGGGDRCKSMNHFLWSFLCALGEAQYLNRTLVMDLTLCLSSVYTLSGQNEEGKDFRFYFDFEHLKEAASMLDQVQFWADWGKWYKKNGLKLHLVEDFRVTPMKLVDVKDTLIMRKFGTVEPDNYWYRVCEGETESVVQRPWNLLWKSKRLMEIVSAIASRLNWDYDAIHIERGDKARNKEVWPNLEKDTSPSSILSTLQDKIEQGRNLYIATNEPELSFFNPLKDKYKPHFLDEFKDLWDESSEWYSETTKLNGGNPVEFDGYMRASVDTEVFLRGKKQIETFNDLTNDCRDGIGTCNVAAS", "length": 561, "header": "tr|Q9SU16-1|Q9SU16_ARATH Isoform 1 of Calcium ion-binding protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SU16-1" }, "locus": { "chromosome": "4", "start_pos": 7482361, "end_pos": 7484566, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT4G12700.1", "url": "https://www.ensemblgenomes.org/id/AT4G12700.1" }, { "database": "Ensembl Peptide", "id": "AT4G12700.1", "url": "https://www.ensemblgenomes.org/id/AT4G12700.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "1999", "authors": "Mayer K, Sch\u00fcller C, Wambutt R, Murphy G, Volckaert G, Pohl T, D\u00fcsterh\u00f6ft A, Stiekema W, Entian K D, Terryn N, Harris B, Ansorge W, Brandt P, Grivell L, Rieger M, Weichselgartner M, de Simone V, Obermaier B, Mache R, M\u00fcller M, Kreis M, Delseny M, Puigdomenech P, Watson M, Schmidtheini T, Reichert B, Portatelle D, Perez-Alonso M, Boutry M, Bancroft I, Vos P, Hoheisel J, Zimmermann W, Wedler H, Ridley P, Langham S A, McCullagh B, Bilham L, Robben J, Van der Schueren J, Grymonprez B, Chuang Y J, Vandenbussche F, Braeken M, Weltjens I, Voet M, Bastiaens I, Aert R, Defoor E, Weitzenegger T, Bothe G, Ramsperger U, Hilbert H, Braun M, Holzer E, Brandt A, Peters S, van Staveren M, 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D, Perez-Alonso M, Boutry M, Bancroft I, Vos P, Hoheisel J, Zimmermann W, Wedler H, Ridley P, Langham S A, McCullagh B, Bilham L, Robben J, Van der Schueren J, Grymonprez B, Chuang Y J, Vandenbussche F, Braeken M, Weltjens I, Voet M, Bastiaens I, Aert R, Defoor E, Weitzenegger T, Bothe G, Ramsperger U, Hilbert H, Braun M, Holzer E, Brandt A, Peters S, van Staveren M, Dirske W, Mooijman P, Klein Lankhorst R, Rose M, Hauf J, K\u00f6tter P, Berneiser S, Hempel S, Feldpausch M, Lamberth S, Van den Daele H, De Keyser A, Buysshaert C, Gielen J, Villarroel R, De Clercq R, Van Montagu M, Rogers J, Cronin A, Quail M, Bray-Allen S, Clark L, Doggett J, Hall S, Kay M, Lennard N, McLay K, Mayes R, Pettett A, Rajandream M A, Lyne M, Benes V, Rechmann S, Borkova D, Bl\u00f6cker H, Scharfe M, Grimm M, L\u00f6hnert T H, Dose S, de Haan M, Maarse A, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Fartmann B, Granderath K, Dauner D, Herzl A, Neumann S, Argiriou A, Vitale D, Liguori R, Piravandi E, Massenet O, Quigley F, Clabauld G, M\u00fcndlein A, Felber R, Schnabl S, Hiller R, Schmidt W, Lecharny A, Aubourg S, Chefdor F, Cooke R, Berger C, Montfort A, Casacuberta E, Gibbons T, Weber N, Vandenbol M, Bargues M, Terol J, Torres A, Perez-Perez A, Purnelle B, Bent E, Johnson S, Tacon D, Jesse T, Heijnen L, Schwarz S, Scholler P, Heber S, Francs P, Bielke C, Frishman D, Haase D, Lemcke K, Mewes H W, Stocker S, Zaccaria P, Bevan M, Wilson R K, de la Bastide M, Habermann K, Parnell L, Dedhia N, Gnoj L, Schutz K, Huang E, Spiegel L, Sehkon M, Murray J, Sheet P, Cordes M, Abu-Threideh J, Stoneking T, Kalicki J, Graves T, Harmon G, Edwards J, Latreille P, Courtney L, Cloud J, Abbott A, Scott K, Johnson D, Minx P, Bentley D, Fulton B, Miller N, Greco T, Kemp K, Kramer J, Fulton L, Mardis E, Dante M, Pepin K, Hillier L, Nelson J, Spieth J, Ryan E, Andrews S, Geisel C, Layman D, Du H, Ali J, Berghoff A, Jones K, Drone K, Cotton M, Joshu C, Antonoiu B, Zidanic M, Strong C, Sun H, Lamar B, Yordan C, Ma P, Zhong J, Preston R, Vil D, Shekher M, Matero A, Shah R, Swaby I K, O'Shaughnessy A, Rodriguez M, Hoffmann J, Till S, Granat S, Shohdy N, Hasegawa A, Hameed A, Lodhi M, Johnson A, Chen E, Marra M, Martienssen R, McCombie W R", "evidence": [ { "database": "UniProtKB", "id": "F4JRD0", "url": "https://www.uniprot.org/uniprotkb/F4JRD0" } ], "reference": [ { "type": "PubMed", "id": "10617198", "url": "https://glygen.org/publication/PubMed/10617198" } ] }, { "title": "Comparative large-scale characterisation of plant vs. mammal proteins reveals similar and idiosyncratic N-alpha acetylation features.", "journal": "Mol. Cell. Proteomics", "date": "2012", "authors": "Bienvenut WV, Sumpton D, Martinez A, Lilla S, Espagne C, Meinnel T, Giglione C", "evidence": [ { "database": "UniProtKB", "id": "F4JRD0", "url": "https://www.uniprot.org/uniprotkb/F4JRD0" } ], "reference": [ { "type": "PubMed", "id": "22223895", "url": "https://glygen.org/publication/PubMed/22223895" } ] }, { "title": "Quantitative phosphoproteomics identifies SnRK2 protein kinase substrates and reveals the effectors of abscisic acid action.", "journal": "Proceedings of the National Academy of Sciences of the United States of America", "date": "2013-07-02", "authors": "Wang Pengcheng, Xue Liang, Batelli Giorgia, Lee Shinyoung, Hou Yueh-Ju, Van Oosten Michael J, Zhang Huiming, Tao W Andy, Zhu Jian-Kang", "evidence": [ { "database": "iPTMnet", "id": "Q9SU28", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SU28" } ], "reference": [ { "type": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "F4JRD0", "url": "https://www.uniprot.org/uniprotkb/F4JRD0" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT4G12580", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT4G12580", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": {}, "pro_annotation": [], "site_annotation": [ { "start_pos": 55, "end_pos": 57, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [], "binding_sites": 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"sequence": "MPIGWVKSLHCKSKAFDDVYHHHSNKGKLLLPSYSCRKNVRDVVNTQPGTVKKNPKPDPSLRRLCSSRRPELDSNSHHPTRRSVSARASSESVLPVLTDLPDGHPSRNVVEIIFQSSWSSDEFPGRVEMIFKVENGSKAVTRFEEYREAVKSRSCSKVDSDRVDGSACDENARCSADGNEMMRFFPLGPIPGGINGGAWGFPGGKGAAVCTFSGSGEAHASTGGGGGRRAMLICRVIAGRVAKKGEFGSDSVAGRAGELIVFDARAVLPCFLIFFRL", "length": 277, "header": "tr|Q9SU37-1|Q9SU37_ARATH Isoform 1 of Zinc finger (C2H2 type) family protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9SU37-1" }, "locus": { "chromosome": "4", "start_pos": 7385695, "end_pos": 7386931, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT4G12450.1", "url": "https://www.ensemblgenomes.org/id/AT4G12450.1" }, { "database": "Ensembl Peptide", "id": "AT4G12450.1", "url": "https://www.ensemblgenomes.org/id/AT4G12450.1" } ] } } ], "glycosylation": [], "phosphorylation": [ { "start_pos": 119, "end_pos": 119, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SU37", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SU37" }, { "database": "PubMed", "id": "26187819", "url": "https://glygen.org/publication/PubMed/26187819" } ], "site_lbl": "Ser119" }, { "start_pos": 120, "end_pos": 120, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SU37", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SU37" }, { "database": "PubMed", "id": "26187819", "url": "https://glygen.org/publication/PubMed/26187819" } ], "site_lbl": "Ser120" }, { "start_pos": 137, "end_pos": 137, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SU37", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SU37" } ], "site_lbl": "Ser137" }, { "start_pos": 141, "end_pos": 141, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": 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"url": "https://www.uniprot.org/uniprotkb/Q9SU37" } ], "reference": [ { "type": "PubMed", "id": "10617198", "url": "https://glygen.org/publication/PubMed/10617198" } ] }, { "title": "Integrating Phosphoproteomics and Bioinformatics to Study Brassinosteroid-Regulated Phosphorylation Dynamics in Arabidopsis.", "journal": "BMC genomics", "date": "2015-07-18", "authors": "Lin Li-Ling, Hsu Chia-Lang, Hu Chia-Wei, Ko Shiao-Yun, Hsieh Hsu-Liang, Huang Hsuan-Cheng, Juan Hsueh-Fen", "evidence": [ { "database": "iPTMnet", "id": "Q9SU37", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SU37" } ], "reference": [ { "type": "PubMed", "id": "26187819", "url": "https://glygen.org/publication/PubMed/26187819" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ 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OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9SU55-1" }, "locus": { "chromosome": "3", "start_pos": 17682952, "end_pos": 17683854, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G47920.1", "url": "https://www.ensemblgenomes.org/id/AT3G47920.1" }, { "database": "Ensembl Peptide", "id": "AT3G47920.1", "url": "https://www.ensemblgenomes.org/id/AT3G47920.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs 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Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9SU55", "url": "https://www.uniprot.org/uniprotkb/Q9SU55" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9SU55", "url": "https://www.uniprot.org/uniprotkb/Q9SU55" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G47920", "name": "", "url": 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"Protein" ] } ], "sequence": { "sequence": "MGVDYYNILKVNHNATEDDLKKAYKRLAMIWHPDKNPSTRRDEAEAKFKRISEAYDVLSDPQKRQIYDLYGEEGLKSGKIPNSSSSEASSSSSSSSSRYPHFHQHRPQHPPNASSFRFNPRDAEDIYAEFFGSENGGGSNNAGGRGNRAFRNGHFNTGGANGYSGEMRKVPAMENPLPVSLEDLYKGVVKKMRITRNVYDASGRMMVEAEILPIEIKPGWKKGTKLTFPKKGNEEPGIIPADIVFVVEEKPHPVYKRDGNDLLVSQEITLLEALTGKTVNLITLDGRTLMIPLTEIIKPDHEIVVPNEGMPISKEPGKKGNLKLKLSVKYPSRLTSDQKFELKRVLGGVS", "length": 350, "header": "tr|Q9SU57-1|Q9SU57_ARATH Isoform 1 of DNAJ heat shock family protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SU57-1" }, "isoforms": [ { "isoform_ac": "Q9SU57-1", "url": "https://www.uniprot.org/uniprotkb/Q9SU57/entry", "sequence": { "sequence": 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"date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9SU57", "url": "https://www.uniprot.org/uniprotkb/Q9SU57" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G47940", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G47940", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "F1NKV0-1", "protein_name": "DnaJ heat shock protein family (Hsp40) member B4", "gene_name": "DNAJB4", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": 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"MSKTANFLSLRSNPLPPIFSSTGNSPFLRASSALNLPTTASKPFHSWIRASSRRRLVLGGFGGASLWMNNNMSGKFGGKSFIASARQTNPSPVEQALNKVDWPETFPFKEEDFQRYDESSDSTFYEAPRFVTHIDDPAIAALTKYYSKVLPQSDTPGVSILDMCSSWVSHYPPGYRQERIVGMGMNEEELKRNPVLTEYIVQDLNLNSNLPFEDNSFQVITNVVSVDYLTKPLEVFKEMNRILKPGGLALMSFSNRCFFTKAISIWTSTGDADHALIVGSYFHYAGGFEAPQAVDISPNPGRSDPMYVVYSRKLPMV", "length": 317, "header": "tr|Q9SU88-1|Q9SU88_ARATH Isoform 1 of S-adenosyl-L-methionine-dependent methyltransferases superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SU88-1" }, "isoforms": [ { "isoform_ac": "Q9SU88-1", "url": "https://www.uniprot.org/uniprotkb/Q9SU88/entry", "sequence": { "sequence": "MSKTANFLSLRSNPLPPIFSSTGNSPFLRASSALNLPTTASKPFHSWIRASSRRRLVLGGFGGASLWMNNNMSGKFGGKSFIASARQTNPSPVEQALNKVDWPETFPFKEEDFQRYDESSDSTFYEAPRFVTHIDDPAIAALTKYYSKVLPQSDTPGVSILDMCSSWVSHYPPGYRQERIVGMGMNEEELKRNPVLTEYIVQDLNLNSNLPFEDNSFQVITNVVSVDYLTKPLEVFKEMNRILKPGGLALMSFSNRCFFTKAISIWTSTGDADHALIVGSYFHYAGGFEAPQAVDISPNPGRSDPMYVVYSRKLPMV", "length": 317, "header": "tr|Q9SU88-1|Q9SU88_ARATH Isoform 1 of S-adenosyl-L-methionine-dependent methyltransferases superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SU88-1" }, "locus": { "chromosome": "4", "start_pos": 14511962, "end_pos": 14514588, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT4G29590.1", "url": "https://www.ensemblgenomes.org/id/AT4G29590.1" }, { "database": "Ensembl Peptide", "id": "AT4G29590.1", "url": "https://www.ensemblgenomes.org/id/AT4G29590.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "1999", "authors": "Mayer K, Sch\u00fcller C, Wambutt R, Murphy G, Volckaert G, Pohl T, D\u00fcsterh\u00f6ft A, Stiekema W, Entian K D, Terryn N, Harris B, Ansorge W, Brandt P, Grivell L, Rieger M, Weichselgartner M, de Simone V, Obermaier B, Mache R, M\u00fcller M, 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Granderath K, Dauner D, Herzl A, Neumann S, Argiriou A, Vitale D, Liguori R, Piravandi E, Massenet O, Quigley F, Clabauld G, M\u00fcndlein A, Felber R, Schnabl S, Hiller R, Schmidt W, Lecharny A, Aubourg S, Chefdor F, Cooke R, Berger C, Montfort A, Casacuberta E, Gibbons T, Weber N, Vandenbol M, Bargues M, Terol J, Torres A, Perez-Perez A, Purnelle B, Bent E, Johnson S, Tacon D, Jesse T, Heijnen L, Schwarz S, Scholler P, Heber S, Francs P, Bielke C, Frishman D, Haase D, Lemcke K, Mewes H W, Stocker S, Zaccaria P, Bevan M, Wilson R K, de la Bastide M, Habermann K, Parnell L, Dedhia N, Gnoj L, Schutz K, Huang E, Spiegel L, Sehkon M, Murray J, Sheet P, Cordes M, Abu-Threideh J, Stoneking T, Kalicki J, Graves T, Harmon G, Edwards J, Latreille P, Courtney L, Cloud J, Abbott A, Scott K, Johnson D, Minx P, Bentley D, Fulton B, Miller N, Greco T, Kemp K, Kramer J, Fulton L, Mardis E, Dante M, Pepin K, Hillier L, Nelson J, Spieth J, Ryan E, Andrews S, Geisel C, Layman D, Du H, Ali J, Berghoff A, Jones K, Drone K, Cotton M, Joshu C, Antonoiu B, Zidanic M, Strong C, Sun H, Lamar B, Yordan C, Ma P, Zhong J, Preston R, Vil D, Shekher M, Matero A, Shah R, Swaby I K, O'Shaughnessy A, Rodriguez M, Hoffmann J, Till S, Granat S, Shohdy N, Hasegawa A, Hameed A, Lodhi M, Johnson A, Chen E, Marra M, Martienssen R, McCombie W R", "evidence": [ { "database": "UniProtKB", "id": "Q9SU88", "url": "https://www.uniprot.org/uniprotkb/Q9SU88" } ], "reference": [ { "type": "PubMed", "id": "10617198", "url": "https://glygen.org/publication/PubMed/10617198" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9SU88", "url": "https://www.uniprot.org/uniprotkb/Q9SU88" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT4G29590", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT4G29590", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "S-adenosylmethionine-dependent methyltransferase activity", "id": "GO:0008757", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008757", "evidence": [ { "database": "UniProtKB", "id": "Q9SU88", "url": "https://www.uniprot.org/uniprotkb/Q9SU88" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "methylation", "id": "GO:0032259", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0032259", "evidence": [ { "database": "UniProtKB", "id": "Q9SU88", "url": "https://www.uniprot.org/uniprotkb/Q9SU88" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "chloroplast", "id": "GO:0009507", "url": 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"https://www.ensemblgenomes.org/id/AT4G29560.1" } ] } } ], "glycosylation": [], "phosphorylation": [ { "start_pos": 71, "end_pos": 71, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Thr", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SU89", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SU89" }, { "database": "PubMed", "id": "24924143", "url": "https://glygen.org/publication/PubMed/24924143" } ], "site_lbl": "Thr71" }, { "start_pos": 78, "end_pos": 78, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SU89", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SU89" }, { "database": "PubMed", "id": "24924143", "url": "https://glygen.org/publication/PubMed/24924143" } ], "site_lbl": "Ser78" } ], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "1999", "authors": "Mayer K, Sch\u00fcller C, Wambutt R, Murphy G, Volckaert G, Pohl T, D\u00fcsterh\u00f6ft A, Stiekema W, Entian K D, Terryn N, Harris B, Ansorge W, Brandt P, Grivell L, Rieger M, Weichselgartner M, de Simone V, Obermaier B, Mache R, M\u00fcller M, Kreis M, Delseny M, Puigdomenech P, Watson M, Schmidtheini T, Reichert B, Portatelle D, Perez-Alonso M, Boutry M, Bancroft I, Vos P, Hoheisel J, Zimmermann W, Wedler H, Ridley P, Langham S A, McCullagh B, Bilham L, Robben J, Van der Schueren J, Grymonprez B, Chuang Y J, Vandenbussche F, Braeken M, Weltjens I, Voet M, Bastiaens I, Aert R, Defoor E, Weitzenegger T, Bothe G, Ramsperger U, Hilbert H, Braun M, Holzer E, Brandt A, Peters S, van Staveren M, Dirske W, Mooijman P, Klein Lankhorst R, Rose M, Hauf J, K\u00f6tter P, Berneiser S, Hempel S, Feldpausch M, Lamberth S, Van den Daele H, De Keyser A, Buysshaert C, Gielen J, Villarroel R, De Clercq R, Van Montagu M, Rogers J, Cronin A, Quail M, Bray-Allen S, Clark L, Doggett J, Hall S, Kay M, Lennard N, McLay K, Mayes R, Pettett A, Rajandream M A, Lyne M, Benes V, Rechmann S, Borkova D, Bl\u00f6cker H, Scharfe M, Grimm M, L\u00f6hnert T H, Dose S, de Haan M, Maarse A, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Fartmann B, Granderath K, Dauner D, Herzl A, Neumann S, Argiriou A, Vitale D, Liguori R, Piravandi E, Massenet O, Quigley F, Clabauld G, M\u00fcndlein A, Felber R, Schnabl S, Hiller R, Schmidt W, Lecharny A, Aubourg S, Chefdor F, Cooke R, Berger C, Montfort A, Casacuberta E, Gibbons T, Weber N, Vandenbol M, Bargues M, Terol J, Torres A, Perez-Perez A, Purnelle B, Bent E, Johnson S, Tacon D, Jesse T, Heijnen L, Schwarz S, Scholler P, Heber S, Francs P, Bielke C, Frishman D, Haase D, Lemcke K, Mewes H W, Stocker S, Zaccaria P, Bevan M, Wilson R K, de la Bastide M, Habermann K, Parnell L, Dedhia N, Gnoj L, Schutz K, Huang E, Spiegel L, Sehkon M, Murray J, Sheet P, Cordes M, Abu-Threideh J, Stoneking T, Kalicki 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proteome research", "date": "2014-07-03", "authors": "Wu XuNa, Sklodowski Kamil, Encke Bea, Schulze Waltraud X", "evidence": [ { "database": "iPTMnet", "id": "Q9SU89", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SU89" } ], "reference": [ { "type": "PubMed", "id": "24924143", "url": "https://glygen.org/publication/PubMed/24924143" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9SU89", "url": "https://www.uniprot.org/uniprotkb/Q9SU89" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT4G29560", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT4G29560", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "Fanconi anaemia nuclear complex", "id": "GO:0043240", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0043240", "evidence": [ { "database": "UniProtKB", "id": "Q9SU89", "url": "https://www.uniprot.org/uniprotkb/Q9SU89" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 2, "go_terms": [ { "name": "interstrand cross-link repair", "id": "GO:0036297", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0036297", "evidence": [ { "database": "UniProtKB", "id": "Q9SU89", "url": "https://www.uniprot.org/uniprotkb/Q9SU89" } ], "pmid": "" }, { "name": "meiotic DNA double-strand break processing involved in reciprocal meiotic recombination", "id": "GO:0010705", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010705", "evidence": [ { "database": "UniProtKB", "id": "Q9SU89", "url": "https://www.uniprot.org/uniprotkb/Q9SU89" } ], "pmid": "" } ] } ] }, "pro_annotation": [], 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"journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "Q9SU98-1", "uniprot_ac": "Q9SU98", "uniprot_id": "Q9SU98_ARATH", "mass": { "chemical_mass": 90449.0, "monoisotopic_mass": 90449.0 }, "refseq": {}, "gene_names": [ { "name": "T15N24.110", "type": "synonym", "evidence": [ { "id": "Q9SU98", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SU98" } ] }, { "name": "T15N24_110", "type": "synonym", "evidence": [ { "id": "Q9SU98", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SU98" } ] } ], "protein_names": [ { "name": "Kinesin-like protein", "type": "synonym", "evidence": [ { "id": "Q9SU98", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SU98/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": 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"MKSPAILSENRFLGSITSSSIRNLLPKSISGKQKPIIQNPDTKIPRSNDENAIPVDPNQKASDHHTALQFTKQSDSKDGNFGEPIKDNKMGQSTFAEDKRSLLDSPLKVESRSILSRRTNSVPSEIKEEDDDDSLGDQIRELKEELIRTKSDGYNKADASKSGHFARDSLSQLRVSINKSLLMSCPKRDESEGKEVIVDGEDVLELNKHIEKLHGSYDSVHSSFASASCYEADSMSGDDEDVCSEDLEKPMHGNHKDVDFVDNDPSQLDNVEFDTTGSGISIRSQLPSCVLEEPIFSESPKFKNVQKSVAASTKFSANPRNVSESSNIGDMKVNQISPCMSKKVSGPTDSLAASLQRGLQIIDYHQGSSLSKSSSVSFSFGHMALKPCAEGENLNASVQSFRKDKASEGGLSSILLCLSCRKKVDQEAEVTEEAGSNEKHLKNMCMEQAAKIEELTLLLRKSDDGEDGTEFIKETYETKQISEEFGKTNFEVSEKEALLKEIADLKSKLQPTKSTDNLRSSLLLRSIQMRKSIDVSRNGENSDDLAKEREMWTEMESEWISLTDDLRMDIDNHRSRAENLEFELKQEKLATEELNDALTRAVLGHSRFIEQYTELQETYNELGEKHSVMMAGITDVKKAASKAAMNGRHGKRFAKAFSDELSAIRAEKEKERELLKKENKNLRTQLRDTAEAVQAAGELLVRLRESEQALQVSEERFSVVEEEKERLKKQMEQLKSKHKTEIGTMKQYLAESKLPGSALLQPWYKDEEDEIEQVSEHETGAVSFDDYEDDQAWRAEFGATYQDHHY", "length": 806, "header": "tr|Q9SU98-1|Q9SU98_ARATH Isoform 1 of Kinesin-like protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SU98-1" }, "isoforms": [ { "isoform_ac": "Q9SU98-1", "url": "https://www.uniprot.org/uniprotkb/Q9SU98/entry", "sequence": { "sequence": "MKSPAILSENRFLGSITSSSIRNLLPKSISGKQKPIIQNPDTKIPRSNDENAIPVDPNQKASDHHTALQFTKQSDSKDGNFGEPIKDNKMGQSTFAEDKRSLLDSPLKVESRSILSRRTNSVPSEIKEEDDDDSLGDQIRELKEELIRTKSDGYNKADASKSGHFARDSLSQLRVSINKSLLMSCPKRDESEGKEVIVDGEDVLELNKHIEKLHGSYDSVHSSFASASCYEADSMSGDDEDVCSEDLEKPMHGNHKDVDFVDNDPSQLDNVEFDTTGSGISIRSQLPSCVLEEPIFSESPKFKNVQKSVAASTKFSANPRNVSESSNIGDMKVNQISPCMSKKVSGPTDSLAASLQRGLQIIDYHQGSSLSKSSSVSFSFGHMALKPCAEGENLNASVQSFRKDKASEGGLSSILLCLSCRKKVDQEAEVTEEAGSNEKHLKNMCMEQAAKIEELTLLLRKSDDGEDGTEFIKETYETKQISEEFGKTNFEVSEKEALLKEIADLKSKLQPTKSTDNLRSSLLLRSIQMRKSIDVSRNGENSDDLAKEREMWTEMESEWISLTDDLRMDIDNHRSRAENLEFELKQEKLATEELNDALTRAVLGHSRFIEQYTELQETYNELGEKHSVMMAGITDVKKAASKAAMNGRHGKRFAKAFSDELSAIRAEKEKERELLKKENKNLRTQLRDTAEAVQAAGELLVRLRESEQALQVSEERFSVVEEEKERLKKQMEQLKSKHKTEIGTMKQYLAESKLPGSALLQPWYKDEEDEIEQVSEHETGAVSFDDYEDDQAWRAEFGATYQDHHY", "length": 806, "header": "tr|Q9SU98-1|Q9SU98_ARATH Isoform 1 of Kinesin-like protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SU98-1" }, "locus": { "chromosome": "4", "start_pos": 13448599, "end_pos": 13452016, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT4G26660.1", "url": "https://www.ensemblgenomes.org/id/AT4G26660.1" }, { "database": "Ensembl Peptide", "id": "AT4G26660.1", "url": "https://www.ensemblgenomes.org/id/AT4G26660.1" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "other", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 348, "start_aa": "Thr", "end_pos": 348, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr348", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ], "filter_code": "000000000000000010000.00000000001000.0.01000" } ], "phosphorylation": [ { "start_pos": 111, "end_pos": 111, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SU98", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SU98" } ], "site_lbl": "Ser111" }, { "start_pos": 113, "end_pos": 113, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SU98", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SU98" } ], "site_lbl": "Ser113" }, { "start_pos": 119, "end_pos": 119, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Thr", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SU98", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SU98" } ], "site_lbl": "Thr119" }, { "start_pos": 462, "end_pos": 462, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SU98", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SU98" } ], "site_lbl": "Ser462" } ], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "1999", "authors": "Mayer K, Sch\u00fcller C, Wambutt R, Murphy G, Volckaert G, Pohl T, D\u00fcsterh\u00f6ft A, Stiekema W, Entian K D, Terryn N, Harris B, Ansorge W, Brandt P, Grivell L, Rieger M, Weichselgartner M, de Simone V, Obermaier B, Mache R, M\u00fcller M, Kreis M, Delseny M, Puigdomenech P, Watson M, Schmidtheini T, Reichert B, Portatelle D, Perez-Alonso M, Boutry M, Bancroft I, Vos P, Hoheisel J, Zimmermann W, Wedler H, Ridley P, Langham S A, McCullagh B, Bilham L, Robben J, Van der Schueren J, Grymonprez B, Chuang Y J, Vandenbussche F, Braeken M, Weltjens I, Voet M, Bastiaens I, Aert R, Defoor E, Weitzenegger T, Bothe G, Ramsperger U, Hilbert H, Braun M, Holzer E, Brandt A, Peters S, van Staveren M, Dirske W, Mooijman P, Klein Lankhorst R, Rose M, Hauf J, K\u00f6tter P, Berneiser S, Hempel S, Feldpausch M, Lamberth S, Van den Daele H, De Keyser A, Buysshaert C, Gielen J, Villarroel R, De Clercq R, Van Montagu M, Rogers J, Cronin A, Quail M, Bray-Allen S, Clark L, Doggett J, Hall S, Kay M, Lennard N, McLay K, Mayes R, Pettett A, Rajandream M A, Lyne M, Benes V, Rechmann S, Borkova D, Bl\u00f6cker H, Scharfe M, Grimm M, L\u00f6hnert T H, Dose S, de Haan M, Maarse A, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Fartmann B, Granderath K, Dauner D, Herzl A, Neumann S, Argiriou A, Vitale D, Liguori R, Piravandi E, Massenet O, Quigley F, Clabauld G, M\u00fcndlein A, Felber R, Schnabl S, Hiller R, Schmidt W, Lecharny A, Aubourg S, Chefdor F, Cooke R, Berger C, Montfort A, Casacuberta E, Gibbons T, Weber N, Vandenbol M, Bargues M, Terol J, Torres A, Perez-Perez A, Purnelle B, Bent E, Johnson S, Tacon D, Jesse T, Heijnen L, Schwarz S, Scholler P, Heber S, Francs P, Bielke C, Frishman D, Haase D, Lemcke K, Mewes H W, Stocker S, Zaccaria P, Bevan M, Wilson R K, de la Bastide M, Habermann K, Parnell L, Dedhia N, Gnoj L, Schutz K, Huang E, Spiegel L, Sehkon M, Murray J, Sheet P, Cordes M, Abu-Threideh J, Stoneking T, Kalicki J, Graves T, Harmon G, Edwards J, Latreille P, Courtney L, Cloud J, Abbott A, Scott K, Johnson D, Minx P, Bentley D, Fulton B, Miller N, Greco T, Kemp K, Kramer J, Fulton L, Mardis E, Dante M, Pepin K, Hillier L, Nelson J, Spieth J, Ryan E, Andrews S, Geisel C, Layman D, Du H, Ali J, Berghoff A, Jones K, Drone K, Cotton M, Joshu C, Antonoiu B, Zidanic M, Strong C, Sun H, Lamar B, Yordan C, Ma P, Zhong J, Preston R, Vil D, Shekher M, Matero A, Shah R, Swaby I K, O'Shaughnessy A, Rodriguez M, Hoffmann J, Till S, Granat S, Shohdy N, Hasegawa A, Hameed A, Lodhi M, Johnson A, Chen E, Marra M, Martienssen R, McCombie W R", "evidence": [ { "database": "UniProtKB", "id": "Q9SU98", "url": "https://www.uniprot.org/uniprotkb/Q9SU98" } ], "reference": [ { "type": "PubMed", "id": "10617198", "url": "https://glygen.org/publication/PubMed/10617198" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9SU98", "url": "https://www.uniprot.org/uniprotkb/Q9SU98" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT4G26660", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT4G26660", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "chloroplast", "id": "GO:0009507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009507", "evidence": [ { "database": "UniProtKB", "id": "Q9SU98", "url": "https://www.uniprot.org/uniprotkb/Q9SU98" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 178, "end_pos": 180, "annotation": "n_glycosylation_sequon" }, { "start_pos": 321, "end_pos": 323, "annotation": "n_glycosylation_sequon" }, { "start_pos": 395, "end_pos": 397, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [ 348 ], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [ 111, 113, 119, 462 ], "sequon_annotation_sites": [ { "start_pos": 178, "end_pos": 180 }, { "start_pos": 321, "end_pos": 323 }, { "start_pos": 395, "end_pos": 397 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 1 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 1 }, { "field": "exact_o_linked_sites", "count": 1 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", 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"phosphorylation", "table_stats": [ { "field": "total", "count": 4 }, { "field": "total_sites", "count": 4 } ], "sort_fields": [ "start_pos", "end_pos", "kinase_uniprot_canonical_ac", "kinase_gene_name", "residue", "comment", "site_lbl" ] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "Q9SUB2-1", "uniprot_ac": "Q9SUB2", "uniprot_id": "Q9SUB2_ARATH", "mass": { "chemical_mass": 29422.0, "monoisotopic_mass": 29422.0 }, "refseq": {}, "gene_names": [ { "name": "T13K14.180", "type": "synonym", "evidence": [ { "id": "Q9SUB2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SUB2" } ] }, { "name": "T13K14_180", "type": "synonym", "evidence": [ { "id": "Q9SUB2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SUB2" } ] } ], "protein_names": [ { "name": "Late embryogenesis abundant protein (LEA) family protein", "type": "synonym", "evidence": [ { "id": "Q9SUB2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SUB2/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9SUB2", "url": "https://www.uniprot.org/uniprotkb/Q9SUB2" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9SUB2", "locus": {} } ], "crossref": [ { "id": "827849", "url": "https://www.ncbi.nlm.nih.gov/gene/827849", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR060477", "url": "https://www.ebi.ac.uk/interpro/entry/IPR060477", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT4G21020", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT4G21020", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "FTSAFKF", "url": "https://omabrowser.org/oma/group/FTSAFKF/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR47372", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR47372", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR47372:SF36", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR47372:SF36", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF28479", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF28479", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "AT4G21020", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT4G21020", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9SUB2", "url": "https://www.uniprot.org/uniprotkb/Q9SUB2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9SUB2-1", "url": "https://www.uniprot.org/uniprotkb/Q9SUB2-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MAAMQLTRTALVGLSKAFPGIKAPATLAASSRKVSRICFATSVSQNEGRDPLDNARDSRADSAYGSKKWREDTGEYYAQAAKDKANEGASKAADKAYETKEQAKDKAYETKEKAKDTAYNAKEKAKDYAERTKDKVNEGAYKAADKAEDTKEKAKDYAEDTMDNAKEKARHAKEKVKEYGEDTKEKAEGFKETVKGKAEELGEKTKETVKGAWESTKNAAQTVTEAVVGPEEDAEKARADMNKGVEDHRKKKAEKDQKEDDFITFN", "length": 266, "header": 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"glycoprotein_reported_with_glycan" ], "publication": [ { "title": "Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "1999", "authors": "Mayer K, Sch\u00fcller C, Wambutt R, Murphy G, Volckaert G, Pohl T, D\u00fcsterh\u00f6ft A, Stiekema W, Entian K D, Terryn N, Harris B, Ansorge W, Brandt P, Grivell L, Rieger M, Weichselgartner M, de Simone V, Obermaier B, Mache R, M\u00fcller M, Kreis M, Delseny M, Puigdomenech P, Watson M, Schmidtheini T, Reichert B, Portatelle D, Perez-Alonso M, Boutry M, Bancroft I, Vos P, Hoheisel J, Zimmermann W, Wedler H, Ridley P, Langham S A, McCullagh B, Bilham L, Robben J, Van der Schueren J, Grymonprez B, Chuang Y J, Vandenbussche F, Braeken M, Weltjens I, Voet M, Bastiaens I, Aert R, Defoor E, Weitzenegger T, Bothe G, Ramsperger U, Hilbert H, Braun M, Holzer E, Brandt A, Peters S, van Staveren M, Dirske W, Mooijman P, Klein Lankhorst R, Rose M, Hauf J, K\u00f6tter P, Berneiser S, Hempel S, Feldpausch M, Lamberth S, Van den Daele H, De Keyser A, Buysshaert C, Gielen J, Villarroel R, De Clercq R, Van Montagu M, Rogers J, Cronin A, Quail M, Bray-Allen S, Clark L, Doggett J, Hall S, Kay M, Lennard N, McLay K, Mayes R, Pettett A, Rajandream M A, Lyne M, Benes V, Rechmann S, Borkova D, Bl\u00f6cker H, Scharfe M, Grimm M, L\u00f6hnert T H, Dose S, de Haan M, Maarse A, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Fartmann B, Granderath K, Dauner D, Herzl A, Neumann S, Argiriou A, Vitale D, Liguori R, Piravandi E, Massenet O, Quigley F, Clabauld G, M\u00fcndlein A, Felber R, Schnabl S, Hiller R, Schmidt W, Lecharny A, Aubourg S, Chefdor F, Cooke R, Berger C, Montfort A, Casacuberta E, Gibbons T, Weber N, Vandenbol M, Bargues M, Terol J, Torres A, Perez-Perez A, Purnelle B, Bent E, Johnson S, Tacon D, Jesse T, Heijnen L, Schwarz S, Scholler P, Heber S, Francs P, Bielke C, Frishman D, Haase D, Lemcke K, Mewes H W, Stocker S, Zaccaria P, Bevan M, Wilson R K, de la Bastide M, Habermann K, Parnell L, Dedhia N, Gnoj L, Schutz K, Huang E, Spiegel L, Sehkon M, Murray J, Sheet P, Cordes M, Abu-Threideh J, Stoneking T, Kalicki J, Graves T, Harmon G, Edwards J, Latreille P, Courtney L, Cloud J, Abbott A, Scott K, Johnson D, Minx P, Bentley D, Fulton B, Miller N, Greco T, Kemp K, Kramer J, Fulton L, Mardis E, Dante M, Pepin K, Hillier L, Nelson J, Spieth J, Ryan E, Andrews S, Geisel C, Layman D, Du H, Ali J, Berghoff A, Jones K, Drone K, Cotton M, Joshu C, Antonoiu B, Zidanic M, Strong C, Sun H, Lamar B, Yordan C, Ma P, Zhong J, Preston R, Vil D, Shekher M, Matero A, Shah R, Swaby I K, O'Shaughnessy A, Rodriguez M, Hoffmann J, Till S, Granat S, Shohdy N, Hasegawa A, Hameed A, Lodhi M, Johnson A, Chen E, Marra M, Martienssen R, McCombie W R", "evidence": [ { "database": "UniProtKB", "id": "Q9SUE8", "url": "https://www.uniprot.org/uniprotkb/Q9SUE8" } ], "reference": [ { "type": "PubMed", "id": "10617198", "url": "https://glygen.org/publication/PubMed/10617198" } ] }, { "title": "Large-scale phosphorylation mapping reveals the extent of tyrosine phosphorylation in Arabidopsis.", "journal": "Molecular systems biology", "date": "2008", "authors": "Sugiyama Naoyuki, Nakagami Hirofumi, Mochida Keiichi, Daudi Arsalan, Tomita Masaru, Shirasu Ken, Ishihama Yasushi", "evidence": [ { "database": "iPTMnet", "id": "Q9SUE8", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SUE8" } ], "reference": [ { "type": "PubMed", "id": "18463617", "url": "https://glygen.org/publication/PubMed/18463617" } ] }, { "title": "Large-scale Arabidopsis phosphoproteome profiling reveals novel chloroplast kinase substrates and phosphorylation networks.", "journal": "Plant Physiol.", "date": "2009", "authors": "Reiland Sonja, Messerli Ga\u00eblle, Baerenfaller Katja, Gerrits Bertran, Endler Anne, Grossmann Jonas, Gruissem Wilhelm, Baginsky Sacha", "evidence": [ { "database": "UniProtKB", "id": "Q9SUE8", "url": "https://www.uniprot.org/uniprotkb/Q9SUE8" } ], "reference": [ { "type": "PubMed", "id": "19376835", "url": "https://glygen.org/publication/PubMed/19376835" } ] }, { "title": "Large-scale comparative phosphoproteomics identifies conserved phosphorylation sites in plants.", "journal": "Plant physiology", "date": "2010-07", "authors": "Nakagami Hirofumi, Sugiyama Naoyuki, Mochida Keiichi, Daudi Arsalan, Yoshida Yuko, Toyoda Tetsuro, Tomita Masaru, Ishihama Yasushi, Shirasu Ken", "evidence": [ { "database": "iPTMnet", "id": "Q9SUE8", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SUE8" } ], "reference": [ { "type": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" } ] }, { "title": "A large-scale protein phosphorylation analysis reveals novel phosphorylation motifs and phosphoregulatory networks in Arabidopsis.", "journal": "Journal of proteomics", "date": "2013-01-14", "authors": "Wang Xu, Bian Yangyang, Cheng Kai, Gu Li-Fei, Ye Mingliang, Zou Hanfa, Sun Samuel Sai-Ming, He Jun-Xian", "evidence": [ { "database": "iPTMnet", "id": "Q9SUE8", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SUE8" } ], "reference": [ { "type": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" } ] }, { "title": "Genetics and phosphoproteomics reveal a protein phosphorylation network in the abscisic acid signaling pathway in Arabidopsis thaliana.", "journal": "Science signaling", "date": "2013-04-09", "authors": "Umezawa Taishi, Sugiyama Naoyuki, Takahashi Fuminori, Anderson Jeffrey C, Ishihama Yasushi, Peck Scott C, Shinozaki Kazuo", "evidence": [ { "database": "iPTMnet", "id": "Q9SUE8", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SUE8" } ], "reference": [ { "type": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" } ] }, { "title": "Quantitative phosphoproteomics identifies SnRK2 protein kinase substrates and reveals the effectors of abscisic acid action.", "journal": "Proceedings of the National Academy of Sciences of the United States of America", "date": "2013-07-02", "authors": "Wang Pengcheng, Xue Liang, Batelli Giorgia, Lee Shinyoung, Hou Yueh-Ju, Van Oosten Michael J, Zhang Huiming, Tao W Andy, Zhu Jian-Kang", "evidence": [ { "database": "iPTMnet", "id": "Q9SUE8", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SUE8" } ], "reference": [ { "type": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" } ] }, { "title": "Identification of novel PAMP-triggered phosphorylation and dephosphorylation events in Arabidopsis thaliana by quantitative phosphoproteomic analysis.", "journal": "Journal of proteome research", "date": "2014-04-04", "authors": "Rayapuram Naganand, Bonhomme Ludovic, Bigeard Jean, Haddadou Kahina, Przybylski C\u00e9dric, Hirt Heribert, Pflieger Delphine", "evidence": [ { "database": "iPTMnet", "id": "Q9SUE8", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SUE8" } ], "reference": [ { "type": "PubMed", "id": "24601666", "url": "https://glygen.org/publication/PubMed/24601666" } ] }, { "title": "Quantitative phosphoproteomics of the ataxia telangiectasia-mutated (ATM) and ataxia telangiectasia-mutated and rad3-related (ATR) dependent DNA damage response in Arabidopsis thaliana.", "journal": "Molecular & cellular proteomics : MCP", "date": "2015-03", "authors": "Roitinger Elisabeth, Hofer Manuel, K\u00f6cher Thomas, Pichler Peter, Novatchkova Maria, Yang Jianhua, Schl\u00f6gelhofer Peter, Mechtler Karl", "evidence": [ { "database": "iPTMnet", "id": "Q9SUE8", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SUE8" } ], "reference": [ { "type": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel 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Reveals Shared and Specific Targets of Arabidopsis Mitogen-Activated Protein Kinases (MAPKs) MPK3, MPK4, and MPK6.", "journal": "Molecular & cellular proteomics : MCP", "date": "2018-01", "authors": "Rayapuram Naganand, Bigeard Jean, Alhoraibi Hanna, Bonhomme Ludovic, Hesse Anne-Marie, Vinh Jo\u00eblle, Hirt Heribert, Pflieger Delphine", "evidence": [ { "database": "iPTMnet", "id": "Q9SUE8", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SUE8" } ], "reference": [ { "type": "PubMed", "id": "29167316", "url": "https://glygen.org/publication/PubMed/29167316" } ] }, { "title": "Capturing the phosphorylation and protein interaction landscape of the plant TOR kinase.", "journal": "Nature plants", "date": "2019-03", "authors": "Van Leene Jelle, Han Chao, Gadeyne Astrid, Eeckhout Dominique, Matthijs Caroline, Cannoot Bernard, De Winne Nancy, Persiau Geert, Van De Slijke Eveline, Van de Cotte Brigitte, Stes Elisabeth, Van Bel Michiel, Storme Veronique, Impens Francis, Gevaert 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of Arabidopsis Reveals Extensive Clock Control of Key Components in Physiological, Metabolic, and Signaling Pathways.", "journal": "Molecular & cellular proteomics : MCP", "date": "2015-08", "authors": "Choudhary Mani Kant, Nomura Yuko, Wang Lei, Nakagami Hirofumi, Somers David E", "evidence": [ { "database": "iPTMnet", "id": "Q9SUE9", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SUE9" } ], "reference": [ { "type": "PubMed", "id": "26091701", "url": "https://glygen.org/publication/PubMed/26091701" } ] }, { "title": "Integrating Phosphoproteomics and Bioinformatics to Study Brassinosteroid-Regulated Phosphorylation Dynamics in Arabidopsis.", "journal": "BMC genomics", "date": "2015-07-18", "authors": "Lin Li-Ling, Hsu Chia-Lang, Hu Chia-Wei, Ko Shiao-Yun, Hsieh Hsu-Liang, Huang Hsuan-Cheng, Juan Hsueh-Fen", "evidence": [ { "database": "iPTMnet", "id": "Q9SUE9", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SUE9" } ], "reference": [ { "type": 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"database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR44259", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR44259", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR44259:SF26", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR44259:SF26", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00646", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00646", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF03478", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF03478", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PR:Q9SUG4", "url": "https://proconsortium.org/cgi-bin/entry_pro?id=PR:Q9SUG4", "database": "PRO", "categories": [ "Protein" ] }, { "id": "AT4G22170", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT4G22170", "database": "TAIR", "categories": [ 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"MERKHNPNSWSDLPHDLLNLVFERLSFANFNRARSVCSSWYSASRQSVPKNQIHWLILFPEDNNNKNNSSCTLFNPDEKDKLYKTQHLDEEFAKSVCRATYGSWFLMVDPLFNLYILNLFTRERINLHPVELLWKDYELGVSSRNRMKSRGGNVRSPVFWIDEITKDYVVLWGLRDWCVFYSKKGDTSWNQIPQTPDCYRLRYKDHKLYFQGYFSSFKIFDLSGEIPQQTFDSLVFVDHCHFRRWVLYSTLVVTLTGKVLNVEKMMDCSFTVFEVCSSGRRIHSLGDESILLEQGITVLANDTNGFIRNSIYFNNDCENIEKHTYDMFIFNLETQKTEPLHTFDSSSFQFSRAHWFVPSFTLT", "length": 363, "header": "sp|Q9SUG4-1|FB241_ARATH Isoform 1 of Putative F-box protein At4g22170 OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=2 CANONICAL=Q9SUG4-1" }, "locus": { "chromosome": "4", "start_pos": 11736472, "end_pos": 11737767, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT4G22170.1", "url": "https://www.ensemblgenomes.org/id/AT4G22170.1" }, { "database": "Ensembl Peptide", "id": "AT4G22170.1", "url": "https://www.ensemblgenomes.org/id/AT4G22170.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "1999", "authors": "Mayer K, Sch\u00fcller C, Wambutt R, Murphy G, Volckaert G, Pohl T, D\u00fcsterh\u00f6ft A, Stiekema W, Entian K D, Terryn N, Harris B, Ansorge W, Brandt P, Grivell L, Rieger M, Weichselgartner M, de Simone V, Obermaier B, Mache R, M\u00fcller M, Kreis M, Delseny M, Puigdomenech P, Watson M, Schmidtheini T, Reichert B, Portatelle D, Perez-Alonso M, Boutry M, Bancroft I, Vos P, Hoheisel J, Zimmermann W, Wedler H, Ridley P, Langham S A, McCullagh B, Bilham L, Robben J, Van der Schueren J, Grymonprez B, Chuang Y J, Vandenbussche F, Braeken M, Weltjens I, Voet M, Bastiaens I, Aert R, Defoor E, Weitzenegger T, Bothe G, Ramsperger U, Hilbert H, Braun M, Holzer E, Brandt A, Peters S, van Staveren M, Dirske W, Mooijman P, Klein Lankhorst R, Rose M, Hauf J, K\u00f6tter P, Berneiser S, Hempel S, Feldpausch M, Lamberth S, Van den Daele H, De Keyser A, Buysshaert C, Gielen J, Villarroel R, De Clercq R, Van Montagu M, Rogers J, Cronin A, Quail M, Bray-Allen S, Clark L, Doggett J, Hall S, Kay M, Lennard N, McLay K, Mayes R, Pettett A, Rajandream M A, Lyne M, Benes V, Rechmann S, Borkova D, Bl\u00f6cker H, Scharfe M, Grimm M, L\u00f6hnert T H, Dose S, de Haan M, Maarse A, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Fartmann B, Granderath K, Dauner D, Herzl A, Neumann S, Argiriou A, Vitale D, Liguori R, Piravandi E, Massenet O, Quigley F, Clabauld G, M\u00fcndlein A, Felber R, Schnabl S, Hiller R, Schmidt W, Lecharny A, Aubourg S, Chefdor F, Cooke R, Berger C, Montfort A, Casacuberta E, Gibbons T, Weber N, Vandenbol M, Bargues M, Terol J, Torres A, Perez-Perez A, Purnelle B, Bent E, Johnson S, Tacon D, Jesse T, Heijnen L, Schwarz S, Scholler P, Heber S, Francs P, Bielke C, Frishman D, Haase D, Lemcke K, Mewes H W, Stocker S, Zaccaria P, Bevan M, Wilson R K, de la Bastide M, Habermann K, Parnell L, Dedhia N, Gnoj L, Schutz K, Huang E, Spiegel L, Sehkon M, Murray J, Sheet P, Cordes M, Abu-Threideh J, Stoneking T, Kalicki J, Graves T, Harmon G, Edwards J, Latreille P, Courtney L, Cloud J, Abbott A, Scott K, Johnson D, Minx P, Bentley D, Fulton B, Miller N, Greco T, Kemp K, Kramer J, Fulton L, Mardis E, Dante M, Pepin K, Hillier L, Nelson J, Spieth J, Ryan E, Andrews S, Geisel C, Layman D, Du H, Ali J, Berghoff A, Jones K, Drone K, Cotton M, Joshu C, Antonoiu B, Zidanic M, Strong C, Sun H, Lamar B, Yordan C, Ma P, Zhong J, Preston R, Vil D, Shekher M, Matero A, Shah R, Swaby I K, O'Shaughnessy A, Rodriguez M, Hoffmann J, Till S, Granat S, Shohdy N, Hasegawa A, Hameed A, Lodhi M, Johnson A, Chen E, Marra M, Martienssen R, McCombie W R", "evidence": [ { "database": "UniProtKB", "id": "Q9SUG4", "url": "https://www.uniprot.org/uniprotkb/Q9SUG4" } ], "reference": [ { "type": "PubMed", "id": "10617198", "url": "https://glygen.org/publication/PubMed/10617198" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9SUG4", "url": "https://www.uniprot.org/uniprotkb/Q9SUG4" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT4G22170", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT4G22170", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q9SUG4", "url": "https://www.uniprot.org/uniprotkb/Q9SUG4" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 301, "end_pos": 303, "annotation": "n_glycosylation_sequon" }, { "start_pos": 67, "end_pos": 69, "annotation": "n_glycosylation_sequon" }, { "start_pos": 68, "end_pos": 70, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-Q9SUG4-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 363, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-Q9SUG4-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/Q9SUG4" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "Q9SUG4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SUG4" }, { "id": "PRU00080", "database": "PROSITE", "url": "https://prosite.expasy.org/PRU00080" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "F-box", "eco_id": "ECO_0000255", "start_pos": 7, "end_pos": 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V, Rechmann S, Borkova D, Bl\u00f6cker H, Scharfe M, Grimm M, L\u00f6hnert T H, Dose S, de Haan M, Maarse A, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Fartmann B, Granderath K, Dauner D, Herzl A, Neumann S, Argiriou A, Vitale D, Liguori R, Piravandi E, Massenet O, Quigley F, Clabauld G, M\u00fcndlein A, Felber R, Schnabl S, Hiller R, Schmidt W, Lecharny A, Aubourg S, Chefdor F, Cooke R, Berger C, Montfort A, Casacuberta E, Gibbons T, Weber N, Vandenbol M, Bargues M, Terol J, Torres A, Perez-Perez A, Purnelle B, Bent E, Johnson S, Tacon D, Jesse T, Heijnen L, Schwarz S, Scholler P, Heber S, Francs P, Bielke C, Frishman D, Haase D, Lemcke K, Mewes H W, Stocker S, Zaccaria P, Bevan M, Wilson R K, de la Bastide M, Habermann K, Parnell L, Dedhia N, Gnoj L, Schutz K, Huang E, Spiegel L, Sehkon M, Murray J, Sheet P, Cordes M, Abu-Threideh J, Stoneking T, Kalicki J, Graves T, Harmon G, Edwards J, Latreille P, Courtney L, Cloud J, Abbott A, Scott K, Johnson D, Minx P, Bentley D, 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anti-codon-binding domain-containing protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SUR4-1" }, "isoforms": [ { "isoform_ac": "F4JPA3-1", "url": "https://www.uniprot.org/uniprotkb/F4JPA3/entry", "sequence": { "sequence": "MLLRRAKTLPKTLQNLRLFSPAANAALSLDHIQETQLTYLPGFPRPDPKHAETILAVPRSVSGKSISAKERKAGRVPSIIFEQEDGQHGGNKRLISVQTNQIRKLVNHLGYSFFLSRLFDVEVRAEIGSDEVIEKVRALPRAVKSPFLSLMKLIKIHLHSGTDAPLNVTFIRAPPGALLKVDIPLVFIGDDVSPGLKKGASLNTIKRTVKFLCPAEIIPPYIEVDLSQLDIGQKLVMGDLKVHPALKLIKSKDEPIVKVAGGRVTDTQKKSSDTQKK", "length": 277, "header": "tr|F4JPA3-1|F4JPA3_ARATH Computationally mapped isoform of Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain-containing protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SUR4-1" }, "locus": { "chromosome": "4", "start_pos": 12314776, "end_pos": 12316702, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT4G23620.2", "url": "https://www.ensemblgenomes.org/id/AT4G23620.2" }, { "database": "Ensembl Peptide", "id": "AT4G23620.2", "url": "https://www.ensemblgenomes.org/id/AT4G23620.2" } ] } }, { "isoform_ac": "Q9SUR4-1", "url": "https://www.uniprot.org/uniprotkb/Q9SUR4/entry", "sequence": { "sequence": "MLLRRAKTLPKTLQNLRLFSPAANAALSLDHIQETQLTYLPGFPRPDPKHAETILAVPRSVSGKSISAKERKAGRVPSIIFEQEDGQHGGNKRLISVQTNQIRKLVNHLGYSFFLSRLFDVEVRAEIGSDEVIEKVRALPRAIHLHSGTDAPLNVTFIRAPPGALLKVDIPLVFIGDDVSPGLKKGASLNTIKRTVKFLCPAEIIPPYIEVDLSQLDIGQKLVMGDLKVHPALKLIKSKDEPIVKVAGGRVTDTQKKSSDTQKK", "length": 264, "header": "tr|Q9SUR4-1|Q9SUR4_ARATH Isoform 1 of Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain-containing protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SUR4-1" }, "locus": { "chromosome": "4", "start_pos": 12314583, "end_pos": 12316725, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT4G23620.1", "url": "https://www.ensemblgenomes.org/id/AT4G23620.1" }, { "database": "Ensembl Peptide", "id": "AT4G23620.1", "url": "https://www.ensemblgenomes.org/id/AT4G23620.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "1999", "authors": "Mayer K, Sch\u00fcller C, Wambutt R, Murphy G, Volckaert G, Pohl T, D\u00fcsterh\u00f6ft A, Stiekema W, Entian K D, Terryn N, Harris B, Ansorge W, Brandt P, Grivell L, Rieger M, Weichselgartner M, de Simone V, Obermaier B, Mache R, M\u00fcller M, Kreis M, Delseny M, Puigdomenech P, Watson M, Schmidtheini T, Reichert B, Portatelle D, Perez-Alonso M, Boutry M, Bancroft I, Vos P, Hoheisel J, Zimmermann W, Wedler H, Ridley P, Langham S A, McCullagh B, Bilham L, Robben J, Van der Schueren J, Grymonprez B, Chuang Y J, Vandenbussche F, Braeken M, Weltjens I, Voet M, Bastiaens I, Aert R, Defoor E, Weitzenegger T, Bothe G, Ramsperger U, Hilbert H, Braun M, Holzer E, Brandt A, Peters S, van Staveren M, Dirske W, Mooijman P, Klein Lankhorst R, Rose M, Hauf J, K\u00f6tter P, Berneiser S, Hempel S, Feldpausch M, Lamberth S, Van den Daele H, De Keyser A, Buysshaert C, Gielen J, Villarroel R, De Clercq R, Van Montagu M, Rogers J, Cronin A, Quail M, Bray-Allen S, Clark L, Doggett J, Hall S, Kay M, Lennard N, McLay K, Mayes R, Pettett A, Rajandream M A, Lyne M, Benes V, Rechmann S, Borkova D, Bl\u00f6cker H, Scharfe M, Grimm M, L\u00f6hnert T H, Dose S, de Haan M, Maarse A, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Fartmann B, Granderath K, Dauner D, Herzl A, Neumann S, Argiriou A, Vitale D, Liguori R, Piravandi E, Massenet O, Quigley F, Clabauld G, M\u00fcndlein A, Felber R, Schnabl S, Hiller R, Schmidt W, Lecharny A, Aubourg S, Chefdor F, Cooke R, Berger C, Montfort A, Casacuberta E, Gibbons T, Weber N, Vandenbol M, Bargues M, Terol J, Torres A, Perez-Perez A, Purnelle B, Bent E, Johnson S, Tacon D, Jesse T, Heijnen L, Schwarz S, Scholler P, Heber S, Francs P, Bielke C, Frishman D, 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"glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9SUT4", "locus": {} } ], "crossref": [ { "id": "AT4G11270", "url": "https://bar.utoronto.ca/thalemine/portal.do?externalids=AT4G11270", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "826729", "url": "https://www.ncbi.nlm.nih.gov/gene/826729", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR001680", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001680", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR015943", "url": "https://www.ebi.ac.uk/interpro/entry/IPR015943", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR016024", "url": "https://www.ebi.ac.uk/interpro/entry/IPR016024", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR019775", "url": "https://www.ebi.ac.uk/interpro/entry/IPR019775", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036322", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036322", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR049916", "url": "https://www.ebi.ac.uk/interpro/entry/IPR049916", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT4G11270", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT4G11270", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "MESTWKV", "url": "https://omabrowser.org/oma/group/MESTWKV/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR44099", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR44099", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR44099:SF4", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR44099:SF4", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00400", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00400", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "AT4G11270", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT4G11270", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9SUT4", "url": "https://www.uniprot.org/uniprotkb/Q9SUT4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9SUT4-1", "url": "https://www.uniprot.org/uniprotkb/Q9SUT4-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MKCRSVACLWSRAPPSHRVTATASLTNPPTLYTGGSDGSIIWWSISSSSESNSVTRLPHHEIKPIAMLCGHTSPIVDLAICDPTILSSNGVVASDNGNADPFVNCCALISACTDGVLCVWSRSSGQCRKRRKLPPWVGSPSILSTLPSEPRYVCVGCSYIDVDGAETLADTDFQKSRCTVVVVDTYTLTIVHTVFHGNLSIGCLNFMGVVQLDEQESLLMADSFGRLQLVSVSEKSEPSKGSLVSRNWLSEGEIAVSVITRGDLVAFFSKSRCVFWLLNREEAIGEISFVDDSHSSNFLFKEAMILYSSTSTIEGDKDDSISETFVLWDGSGSAVLFTMSYIDGEFTYKNFGEIVTAPDDKRSVKSTFCFVQLRQNLLRVESSCCDVEQPSQWRPHITIWSLCLGNGKEKELQRKVLGESSYFADWISSSCLDPKGSVSAETGTSQSGSQCSAKNDLQSFVSDNGQCVSSSMVISENMYVPYAVVYGFFSGEIEIAKFDFLHGIDSPASSPRSDTDPLVYKQRLLGHTGSVLCLAAHRMFGDANGCNSSHVLISGSMDCTIRIWDLESGNVIMIMHHHVAPVRQIILSPAPTKRPWSKCFLSVGDDSCVALSSLETLRVERMFPGHPNYPTKVVWDGTRGYIACLFRSLSRKSDPIDVLYIWDVKTGARERVLHGAASHSMFDHFCAGISEKSHSGTVLNGNTSVSSLLFPVDEERKPFYLKNYERAASLSTSKPSSSQEKTREESSTASSFLQSIRYPSIKCTCPFPGISTLIFDLSSLAVYCQTHEDSDMHKMLEEKSDKATAQQKTSKDKSPVQKTLDNHAEVVHMDKAIGEYLIRFSLSFLHLWGIDFELDQMLVAHLKLKRPESFIVTSGLQGDKGSLTLAFPGLNATLELWKSSSEFTALRSVIMVSLAQCMISLSHSTATYSSNLAAFYTRNLAEKYPDLKPPLLQLLVTFWQDNSEQVRMAARSLFHHTASLAIPLPLCSDHASEHAELVRSLSGISLNEPKVLSTGEEYPTNSLDSEHIHQAQRLSQAEESEILSWLESFEMQDWISCVGGTSQDAMAAHIIVAAALSIWYPSLVKPGLAMLVVHKLLNLVMAMSEKYSSTAAELLSEGMETTWKTWIGPDIPRIVSDIFFQIECVSSSVGAYQVVPSSIKETLVEVLLPSLAMADVLGFLSIIESQIWSTASDSPVHVVSLRTLIRIIRAAPRNLVLHLEKAVNFVLQTMDPSNTVMRKTCLQTSMATLREVVRVFPMVILNDSSTRLAIGDVITEINNACIHIYDMRSMTKIRVLDASGPPGLPNFLRGASESAVTTAISALSFSPDGEGLVAFSENGLMIRWWSLGSVWWEKLSQSLTPIQCTKLIFIHPWDGFSSSSSRTSVISSISNDEQELPLQETAKNISHVERLKQLVQHLDLSYRLEWASERKVVLTRHNVELGTCLL", "length": 1446, "header": "tr|Q9SUT4-1|Q9SUT4_ARATH Isoform 1 of Transducin/WD40 repeat-like superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SUT4-1" }, "isoforms": [ { "isoform_ac": "Q9SUT4-1", "url": "https://www.uniprot.org/uniprotkb/Q9SUT4/entry", "sequence": { "sequence": 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"length": 1446, "header": "tr|Q9SUT4-1|Q9SUT4_ARATH Isoform 1 of Transducin/WD40 repeat-like superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SUT4-1" }, "locus": { "chromosome": "4", "start_pos": 6854233, "end_pos": 6859738, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT4G11270.1", "url": "https://www.ensemblgenomes.org/id/AT4G11270.1" }, { "database": "Ensembl Peptide", "id": "AT4G11270.1", "url": "https://www.ensemblgenomes.org/id/AT4G11270.1" } ] } } ], "glycosylation": [], "phosphorylation": [ { "start_pos": 1000, "end_pos": 1000, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SUT4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SUT4" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" } ], "site_lbl": "Ser1000" }, { "start_pos": 1002, "end_pos": 1002, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SUT4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SUT4" }, { "database": "PubMed", "id": "18463617", "url": "https://glygen.org/publication/PubMed/18463617" }, { "database": "PubMed", "id": "19376835", "url": "https://glygen.org/publication/PubMed/19376835" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" }, { "database": "PubMed", "id": "21768351", "url": "https://glygen.org/publication/PubMed/21768351" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" }, { "database": "PubMed", "id": "23328941", "url": "https://glygen.org/publication/PubMed/23328941" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" }, { "database": "PubMed", "id": "23660473", "url": "https://glygen.org/publication/PubMed/23660473" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "24043427", "url": "https://glygen.org/publication/PubMed/24043427" }, { "database": "PubMed", "id": "24601666", "url": "https://glygen.org/publication/PubMed/24601666" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "26091701", "url": "https://glygen.org/publication/PubMed/26091701" }, { "database": "PubMed", "id": "26187819", "url": "https://glygen.org/publication/PubMed/26187819" }, { "database": "PubMed", "id": "29167316", "url": "https://glygen.org/publication/PubMed/29167316" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ], "site_lbl": "Ser1002" }, { "start_pos": 1005, "end_pos": 1005, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SUT4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SUT4" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" }, { "database": "PubMed", "id": "23328941", "url": "https://glygen.org/publication/PubMed/23328941" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" }, { "database": "PubMed", "id": "23660473", "url": "https://glygen.org/publication/PubMed/23660473" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "28011693", "url": "https://glygen.org/publication/PubMed/28011693" }, { "database": "PubMed", "id": "29167316", "url": "https://glygen.org/publication/PubMed/29167316" } ], "site_lbl": "Ser1005" }, { "start_pos": 506, "end_pos": 506, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SUT4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SUT4" }, { "database": "PubMed", "id": "18463617", "url": "https://glygen.org/publication/PubMed/18463617" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" }, { "database": "PubMed", "id": "23328941", "url": "https://glygen.org/publication/PubMed/23328941" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" }, { "database": "PubMed", "id": "23660473", "url": "https://glygen.org/publication/PubMed/23660473" }, { "database": "PubMed", "id": "24601666", "url": "https://glygen.org/publication/PubMed/24601666" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "26091701", "url": "https://glygen.org/publication/PubMed/26091701" }, { "database": "PubMed", "id": "26187819", "url": "https://glygen.org/publication/PubMed/26187819" }, { "database": "PubMed", "id": "29167316", "url": "https://glygen.org/publication/PubMed/29167316" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ], "site_lbl": "Ser506" }, { "start_pos": 509, "end_pos": 509, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SUT4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SUT4" }, { "database": "PubMed", "id": "18463617", "url": "https://glygen.org/publication/PubMed/18463617" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" }, { "database": "PubMed", "id": "23328941", "url": "https://glygen.org/publication/PubMed/23328941" }, { "database": "PubMed", "id": "26187819", "url": "https://glygen.org/publication/PubMed/26187819" }, { "database": "PubMed", "id": "29167316", "url": "https://glygen.org/publication/PubMed/29167316" } ], "site_lbl": "Ser509" }, { "start_pos": 510, "end_pos": 510, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SUT4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SUT4" }, { "database": "PubMed", "id": "18463617", "url": "https://glygen.org/publication/PubMed/18463617" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" }, { "database": "PubMed", "id": "23328941", "url": "https://glygen.org/publication/PubMed/23328941" }, { "database": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" }, { "database": "PubMed", "id": "23660473", "url": "https://glygen.org/publication/PubMed/23660473" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "26091701", "url": "https://glygen.org/publication/PubMed/26091701" }, { "database": "PubMed", "id": "26187819", "url": "https://glygen.org/publication/PubMed/26187819" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ], "site_lbl": "Ser510" }, { "start_pos": 513, "end_pos": 513, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SUT4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SUT4" }, { "database": "PubMed", "id": "26187819", "url": "https://glygen.org/publication/PubMed/26187819" } ], "site_lbl": "Ser513" }, { "start_pos": 729, "end_pos": 729, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SUT4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SUT4" }, { "database": "PubMed", "id": "21768351", "url": "https://glygen.org/publication/PubMed/21768351" }, { "database": "PubMed", "id": "23660473", "url": "https://glygen.org/publication/PubMed/23660473" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ], "site_lbl": "Ser729" } ], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "1999", "authors": "Mayer K, Sch\u00fcller C, Wambutt R, Murphy G, Volckaert G, Pohl T, D\u00fcsterh\u00f6ft A, Stiekema W, Entian K D, Terryn N, Harris B, Ansorge W, Brandt P, Grivell L, Rieger M, Weichselgartner M, de Simone V, Obermaier B, Mache R, M\u00fcller M, Kreis M, Delseny M, Puigdomenech P, Watson M, Schmidtheini T, Reichert B, Portatelle D, Perez-Alonso M, Boutry M, Bancroft I, Vos P, Hoheisel J, Zimmermann W, Wedler H, Ridley P, Langham S A, McCullagh B, Bilham L, Robben J, Van der Schueren J, Grymonprez B, Chuang Y J, Vandenbussche F, Braeken M, Weltjens I, Voet M, Bastiaens I, Aert R, Defoor E, Weitzenegger T, Bothe G, Ramsperger U, Hilbert H, Braun M, Holzer E, Brandt A, Peters S, van Staveren M, Dirske W, Mooijman P, Klein Lankhorst R, Rose M, Hauf J, K\u00f6tter P, Berneiser S, Hempel S, Feldpausch M, Lamberth S, Van den Daele H, De Keyser A, Buysshaert C, Gielen J, Villarroel R, De Clercq R, Van Montagu M, Rogers J, Cronin A, Quail M, Bray-Allen S, Clark L, Doggett J, Hall S, Kay M, Lennard N, McLay K, Mayes R, Pettett A, Rajandream M A, Lyne M, Benes V, Rechmann S, Borkova D, Bl\u00f6cker H, Scharfe M, Grimm M, L\u00f6hnert T H, Dose S, de Haan M, Maarse A, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Fartmann B, Granderath K, Dauner D, Herzl A, Neumann S, Argiriou A, Vitale D, Liguori R, Piravandi E, Massenet O, Quigley F, Clabauld G, M\u00fcndlein A, Felber R, Schnabl S, Hiller R, Schmidt W, Lecharny A, Aubourg S, Chefdor F, Cooke R, Berger C, Montfort A, Casacuberta E, Gibbons T, Weber N, Vandenbol M, Bargues M, Terol J, Torres A, Perez-Perez A, Purnelle B, Bent E, Johnson S, Tacon D, Jesse T, Heijnen L, Schwarz S, Scholler P, Heber S, Francs P, Bielke C, Frishman D, Haase D, Lemcke K, Mewes H W, Stocker S, Zaccaria P, Bevan M, Wilson R K, de la Bastide M, Habermann K, Parnell L, Dedhia N, Gnoj L, Schutz K, Huang E, Spiegel L, Sehkon M, Murray J, Sheet P, Cordes M, Abu-Threideh J, Stoneking T, Kalicki J, Graves T, Harmon G, Edwards J, Latreille P, Courtney L, Cloud J, Abbott A, Scott K, Johnson D, Minx P, Bentley D, Fulton B, Miller N, Greco T, Kemp K, Kramer J, Fulton L, Mardis E, Dante M, Pepin K, Hillier L, Nelson J, Spieth J, Ryan E, Andrews S, Geisel C, Layman D, Du H, Ali J, Berghoff A, Jones K, Drone K, Cotton M, Joshu C, Antonoiu B, Zidanic M, Strong C, Sun H, Lamar B, Yordan C, Ma P, Zhong J, Preston R, Vil D, Shekher M, Matero A, Shah R, Swaby I K, O'Shaughnessy A, Rodriguez M, Hoffmann J, Till S, Granat S, Shohdy N, Hasegawa A, Hameed A, Lodhi M, Johnson A, Chen E, Marra M, Martienssen R, McCombie W R", "evidence": [ { "database": "UniProtKB", "id": "Q9SUT4", "url": "https://www.uniprot.org/uniprotkb/Q9SUT4" } ], "reference": [ { "type": "PubMed", "id": "10617198", "url": "https://glygen.org/publication/PubMed/10617198" } ] }, { "title": "Site-specific phosphorylation profiling of Arabidopsis proteins by mass spectrometry and peptide chip analysis.", "journal": "J. Proteome Res.", "date": "2008", "authors": "de la Fuente van Bentem Sergio, Anrather Dorothea, Dohnal Ilse, Roitinger Elisabeth, Csaszar Edina, Joore Jos, Buijnink Joshua, Carreri Alessandro, Forzani Celine, Lorkovic Zdravko J, Barta Andrea, Lecourieux David, Verhounig Andreas, Jonak Claudia, Hirt Heribert", "evidence": [ { "database": "UniProtKB", "id": "Q9SUT4", "url": "https://www.uniprot.org/uniprotkb/Q9SUT4" } ], "reference": [ { "type": "PubMed", "id": "18433157", "url": "https://glygen.org/publication/PubMed/18433157" } ] }, { "title": "Large-scale phosphorylation mapping reveals the extent of tyrosine phosphorylation in Arabidopsis.", "journal": "Molecular systems biology", "date": "2008", "authors": "Sugiyama Naoyuki, Nakagami Hirofumi, Mochida Keiichi, Daudi Arsalan, Tomita Masaru, Shirasu Ken, Ishihama Yasushi", "evidence": [ { "database": "iPTMnet", "id": "Q9SUT4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SUT4" } ], "reference": [ { "type": "PubMed", 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"https://glygen.org/publication/PubMed/21768351" } ] }, { "title": "A large-scale protein phosphorylation analysis reveals novel phosphorylation motifs and phosphoregulatory networks in Arabidopsis.", "journal": "Journal of proteomics", "date": "2013-01-14", "authors": "Wang Xu, Bian Yangyang, Cheng Kai, Gu Li-Fei, Ye Mingliang, Zou Hanfa, Sun Samuel Sai-Ming, He Jun-Xian", "evidence": [ { "database": "iPTMnet", "id": "Q9SUT4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SUT4" } ], "reference": [ { "type": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" } ] }, { "title": "Quantitative phosphoproteomics after auxin-stimulated lateral root induction identifies an SNX1 protein phosphorylation site required for growth.", "journal": "Molecular & cellular proteomics : MCP", "date": "2013-05", "authors": "Zhang Hongtao, Zhou Houjiang, Berke Lidija, Heck Albert J R, Mohammed Shabaz, Scheres Ben, Menke Frank L H", "evidence": [ { 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& cellular proteomics : MCP", "date": "2013-08", "authors": "Xue Liang, Wang Pengcheng, Wang Lianshui, Renzi Emily, Radivojac Predrag, Tang Haixu, Arnold Randy, Zhu Jian-Kang, Tao W Andy", "evidence": [ { "database": "iPTMnet", "id": "Q9SUT4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SUT4" } ], "reference": [ { "type": "PubMed", "id": "23660473", "url": "https://glygen.org/publication/PubMed/23660473" } ] }, { "title": "Quantitative phosphoproteomics identifies SnRK2 protein kinase substrates and reveals the effectors of abscisic acid action.", "journal": "Proceedings of the National Academy of Sciences of the United States of America", "date": "2013-07-02", "authors": "Wang Pengcheng, Xue Liang, Batelli Giorgia, Lee Shinyoung, Hou Yueh-Ju, Van Oosten Michael J, Zhang Huiming, Tao W Andy, Zhu Jian-Kang", "evidence": [ { "database": "iPTMnet", "id": "Q9SUT4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SUT4" } ], "reference": [ { "type": 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"authors": "Rayapuram Naganand, Bonhomme Ludovic, Bigeard Jean, Haddadou Kahina, Przybylski C\u00e9dric, Hirt Heribert, Pflieger Delphine", "evidence": [ { "database": "iPTMnet", "id": "Q9SUT4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SUT4" } ], "reference": [ { "type": "PubMed", "id": "24601666", "url": "https://glygen.org/publication/PubMed/24601666" } ] }, { "title": "Quantitative phosphoproteomics of the ataxia telangiectasia-mutated (ATM) and ataxia telangiectasia-mutated and rad3-related (ATR) dependent DNA damage response in Arabidopsis thaliana.", "journal": "Molecular & cellular proteomics : MCP", "date": "2015-03", "authors": "Roitinger Elisabeth, Hofer Manuel, K\u00f6cher Thomas, Pichler Peter, Novatchkova Maria, Yang Jianhua, Schl\u00f6gelhofer Peter, Mechtler Karl", "evidence": [ { "database": "iPTMnet", "id": "Q9SUT4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SUT4" } ], "reference": [ { "type": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] }, { "title": "Quantitative Circadian Phosphoproteomic Analysis of Arabidopsis Reveals Extensive Clock Control of Key Components in Physiological, Metabolic, and Signaling Pathways.", "journal": "Molecular & cellular proteomics : MCP", "date": "2015-08", "authors": "Choudhary Mani Kant, Nomura Yuko, Wang Lei, Nakagami Hirofumi, Somers David E", "evidence": [ { "database": "iPTMnet", "id": "Q9SUT4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SUT4" } ], "reference": [ { "type": "PubMed", "id": "26091701", "url": "https://glygen.org/publication/PubMed/26091701" } ] }, { "title": "Integrating Phosphoproteomics and Bioinformatics to Study Brassinosteroid-Regulated Phosphorylation Dynamics in Arabidopsis.", "journal": "BMC genomics", "date": "2015-07-18", "authors": "Lin Li-Ling, Hsu Chia-Lang, Hu Chia-Wei, Ko Shiao-Yun, Hsieh Hsu-Liang, Huang Hsuan-Cheng, Juan Hsueh-Fen", "evidence": [ { "database": "iPTMnet", "id": "Q9SUT4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SUT4" } ], "reference": [ { "type": "PubMed", "id": "26187819", "url": "https://glygen.org/publication/PubMed/26187819" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9SUT4", "url": "https://www.uniprot.org/uniprotkb/Q9SUT4" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] }, { "title": "Protein Phosphatase 2Cs and Microtubule-Associated Stress Protein 1 Control Microtubule Stability, Plant Growth, and Drought Response.", "journal": "The Plant cell", "date": "2017-01", "authors": "Bhaskara Govinal Badiger, Wen Tuan-Nan, Nguyen Thao Thi, Verslues Paul E", "evidence": [ { 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"title": "Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "1999", "authors": "Mayer K, Sch\u00fcller C, Wambutt R, Murphy G, Volckaert G, Pohl T, D\u00fcsterh\u00f6ft A, Stiekema W, Entian K D, Terryn N, Harris B, Ansorge W, Brandt P, Grivell L, Rieger M, Weichselgartner M, de Simone V, Obermaier B, Mache R, M\u00fcller M, Kreis M, Delseny M, Puigdomenech P, Watson M, Schmidtheini T, Reichert B, Portatelle D, Perez-Alonso M, Boutry M, Bancroft I, Vos P, Hoheisel J, Zimmermann W, Wedler H, Ridley P, Langham S A, McCullagh B, Bilham L, Robben J, Van der Schueren J, Grymonprez B, Chuang Y J, Vandenbussche F, Braeken M, Weltjens I, Voet M, Bastiaens I, Aert R, Defoor E, Weitzenegger T, Bothe G, Ramsperger U, Hilbert H, Braun M, Holzer E, Brandt A, Peters S, van Staveren M, Dirske W, Mooijman P, Klein Lankhorst R, Rose M, Hauf J, K\u00f6tter P, Berneiser S, Hempel S, Feldpausch M, Lamberth S, Van den Daele H, De Keyser A, Buysshaert C, Gielen J, Villarroel R, De Clercq R, Van Montagu M, Rogers J, Cronin A, Quail M, Bray-Allen S, Clark L, Doggett J, Hall S, Kay M, Lennard N, McLay K, Mayes R, Pettett A, Rajandream M A, Lyne M, Benes V, Rechmann S, Borkova D, Bl\u00f6cker H, Scharfe M, Grimm M, L\u00f6hnert T H, Dose S, de Haan M, Maarse A, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Fartmann B, Granderath K, Dauner D, Herzl A, Neumann S, Argiriou A, Vitale D, Liguori R, Piravandi E, Massenet O, Quigley F, Clabauld G, M\u00fcndlein A, Felber R, Schnabl S, Hiller R, Schmidt W, Lecharny A, Aubourg S, Chefdor F, Cooke R, Berger C, Montfort A, Casacuberta E, Gibbons T, Weber N, Vandenbol M, Bargues M, Terol J, Torres A, Perez-Perez A, Purnelle B, Bent E, Johnson S, Tacon D, Jesse T, Heijnen L, Schwarz S, Scholler P, Heber S, Francs P, Bielke C, Frishman D, Haase D, Lemcke K, Mewes H W, Stocker S, Zaccaria P, Bevan M, Wilson R K, de la Bastide M, Habermann K, Parnell L, Dedhia N, Gnoj L, Schutz K, Huang E, Spiegel L, Sehkon M, Murray J, Sheet P, Cordes M, Abu-Threideh J, Stoneking T, Kalicki J, Graves T, Harmon G, Edwards J, Latreille P, Courtney L, Cloud J, Abbott A, Scott K, Johnson D, Minx P, Bentley D, Fulton B, Miller N, Greco T, Kemp K, Kramer J, Fulton L, Mardis E, Dante M, Pepin K, Hillier L, Nelson J, Spieth J, Ryan E, Andrews S, Geisel C, Layman D, Du H, Ali J, Berghoff A, Jones K, Drone K, Cotton M, Joshu C, Antonoiu B, Zidanic M, Strong C, Sun H, Lamar B, Yordan C, Ma P, Zhong J, Preston R, Vil D, Shekher M, Matero A, Shah R, Swaby I K, O'Shaughnessy A, Rodriguez M, Hoffmann J, Till S, Granat S, Shohdy N, Hasegawa A, Hameed A, Lodhi M, Johnson A, Chen E, Marra M, Martienssen R, McCombie W R", "evidence": [ { "database": "UniProtKB", "id": "Q9SUT6", "url": "https://www.uniprot.org/uniprotkb/Q9SUT6" } ], "reference": [ { "type": "PubMed", "id": "10617198", "url": "https://glygen.org/publication/PubMed/10617198" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis 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"Protein Classification" ] }, { "id": "IPR051636", "url": "https://www.ebi.ac.uk/interpro/entry/IPR051636", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT4G22610", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT4G22610", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "GICRITP", "url": "https://omabrowser.org/oma/group/GICRITP/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "Q9SUV8", "url": "https://www.orthodb.org/?gene=Q9SUV8", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR31731", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31731", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF14547", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF14547", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "AT4G22610", "url": 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"MASKNTTAFFLTINLILFGFTVAQPPTCPRDIEACSNVFGLGRILNYQTVRPCCTLVDGLDAYVASVCICDSIKIYGISYPFTVGLVQVLSLCGADYPPPGFRCRENEISVLSYNNGASMAL", "length": 122, "header": "tr|Q9SUV8-1|Q9SUV8_ARATH Isoform 1 of Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SUV8-1" }, "locus": { "chromosome": "4", "start_pos": 11901703, "end_pos": 11902642, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT4G22610.1", "url": "https://www.ensemblgenomes.org/id/AT4G22610.1" }, { "database": "Ensembl Peptide", "id": "AT4G22610.1", "url": "https://www.ensemblgenomes.org/id/AT4G22610.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "1999", "authors": "Mayer K, Sch\u00fcller C, Wambutt R, Murphy G, Volckaert G, Pohl T, D\u00fcsterh\u00f6ft A, Stiekema W, Entian K D, Terryn N, Harris B, Ansorge W, Brandt P, Grivell L, Rieger M, Weichselgartner M, de Simone V, Obermaier B, Mache R, M\u00fcller M, Kreis M, Delseny M, Puigdomenech P, Watson M, Schmidtheini T, Reichert B, Portatelle D, Perez-Alonso M, Boutry M, Bancroft I, Vos P, Hoheisel J, Zimmermann W, Wedler H, Ridley P, Langham S A, McCullagh B, Bilham L, Robben J, Van der Schueren J, Grymonprez B, Chuang Y J, Vandenbussche F, Braeken M, Weltjens I, Voet M, Bastiaens I, Aert R, Defoor E, Weitzenegger T, Bothe G, Ramsperger U, Hilbert H, Braun M, Holzer E, Brandt A, Peters S, van Staveren M, Dirske W, Mooijman P, Klein Lankhorst R, Rose M, Hauf J, K\u00f6tter P, Berneiser S, Hempel S, Feldpausch M, Lamberth S, Van den Daele H, De Keyser A, Buysshaert C, Gielen J, Villarroel R, De Clercq R, Van Montagu M, Rogers J, Cronin A, Quail M, Bray-Allen S, Clark L, Doggett J, Hall S, Kay M, Lennard N, McLay K, Mayes R, Pettett A, Rajandream M A, Lyne M, Benes V, Rechmann S, Borkova D, Bl\u00f6cker H, Scharfe M, Grimm M, L\u00f6hnert T H, Dose S, de Haan M, Maarse A, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Fartmann B, Granderath K, Dauner D, Herzl A, Neumann S, Argiriou A, Vitale D, Liguori R, Piravandi E, Massenet O, Quigley F, Clabauld G, M\u00fcndlein A, Felber R, Schnabl S, Hiller R, Schmidt W, Lecharny A, Aubourg S, Chefdor F, Cooke R, Berger C, Montfort A, Casacuberta E, Gibbons T, Weber N, Vandenbol M, Bargues M, Terol J, Torres A, Perez-Perez A, Purnelle B, Bent E, Johnson S, Tacon D, Jesse T, Heijnen L, Schwarz S, Scholler P, Heber S, Francs P, Bielke C, Frishman D, Haase D, Lemcke K, Mewes H W, Stocker S, Zaccaria P, Bevan M, Wilson R K, de la Bastide M, Habermann K, Parnell L, Dedhia N, Gnoj L, Schutz K, Huang E, Spiegel L, Sehkon M, Murray J, Sheet P, Cordes M, Abu-Threideh J, Stoneking T, Kalicki J, Graves T, Harmon G, Edwards J, Latreille P, Courtney L, Cloud J, Abbott A, Scott K, Johnson D, Minx P, Bentley D, 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"MSGVYDSQADIYLDARPTYPADWYSKLAALSHRHNLAWDAGTGNGQAAIGIAEHYERVVATDVSETMLNLGKPHPKVTYHHTPSSMTEDEMVDLIGGENSVDLITVATAVHWFDLPRFYAIANRLLRKPGGIIAVWSYNTDMVVNPEFDSVMTRFIAETLPYCKFPESQYFLDGYKTLPFPFESVGLGSEGKPMELEMKKTVSFEGFLRMLRSWSAVGAAKEKGVDLLSDNVVKELETAWGGYELVRTIVYKTFMLAGTVP", "length": 261, "header": "tr|Q9SUW6-1|Q9SUW6_ARATH Isoform 1 of S-adenosyl-L-methionine-dependent methyltransferases superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SUW6-1" }, "isoforms": [ { "isoform_ac": "Q9SUW6-1", "url": "https://www.uniprot.org/uniprotkb/Q9SUW6/entry", "sequence": { "sequence": "MSGVYDSQADIYLDARPTYPADWYSKLAALSHRHNLAWDAGTGNGQAAIGIAEHYERVVATDVSETMLNLGKPHPKVTYHHTPSSMTEDEMVDLIGGENSVDLITVATAVHWFDLPRFYAIANRLLRKPGGIIAVWSYNTDMVVNPEFDSVMTRFIAETLPYCKFPESQYFLDGYKTLPFPFESVGLGSEGKPMELEMKKTVSFEGFLRMLRSWSAVGAAKEKGVDLLSDNVVKELETAWGGYELVRTIVYKTFMLAGTVP", "length": 261, "header": "tr|Q9SUW6-1|Q9SUW6_ARATH Isoform 1 of S-adenosyl-L-methionine-dependent methyltransferases superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SUW6-1" }, "locus": { "chromosome": "4", "start_pos": 11858444, "end_pos": 11860426, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT4G22530.2", "url": "https://www.ensemblgenomes.org/id/AT4G22530.2" }, { "database": "Ensembl Peptide", "id": "AT4G22530.2", "url": "https://www.ensemblgenomes.org/id/AT4G22530.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "1999", "authors": "Mayer K, Sch\u00fcller C, Wambutt R, Murphy G, Volckaert G, Pohl T, D\u00fcsterh\u00f6ft A, Stiekema W, Entian K D, Terryn N, Harris B, Ansorge W, Brandt P, Grivell L, Rieger M, Weichselgartner M, de Simone V, Obermaier B, Mache R, M\u00fcller M, Kreis M, Delseny M, Puigdomenech P, Watson M, Schmidtheini T, Reichert B, Portatelle D, Perez-Alonso M, Boutry M, 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Clabauld G, M\u00fcndlein A, Felber R, Schnabl S, Hiller R, Schmidt W, Lecharny A, Aubourg S, Chefdor F, Cooke R, Berger C, Montfort A, Casacuberta E, Gibbons T, Weber N, Vandenbol M, Bargues M, Terol J, Torres A, Perez-Perez A, Purnelle B, Bent E, Johnson S, Tacon D, Jesse T, Heijnen L, Schwarz S, Scholler P, Heber S, Francs P, Bielke C, Frishman D, Haase D, Lemcke K, Mewes H W, Stocker S, Zaccaria P, Bevan M, Wilson R K, de la Bastide M, Habermann K, Parnell L, Dedhia N, Gnoj L, Schutz K, Huang E, Spiegel L, Sehkon M, Murray J, Sheet P, Cordes M, Abu-Threideh J, Stoneking T, Kalicki J, Graves T, Harmon G, Edwards J, Latreille P, Courtney L, Cloud J, Abbott A, Scott K, Johnson D, Minx P, Bentley D, Fulton B, Miller N, Greco T, Kemp K, Kramer J, Fulton L, Mardis E, Dante M, Pepin K, Hillier L, Nelson J, Spieth J, Ryan E, Andrews S, Geisel C, Layman D, Du H, Ali J, Berghoff A, Jones K, Drone K, Cotton M, Joshu C, Antonoiu B, Zidanic M, Strong C, Sun H, Lamar B, Yordan C, Ma P, Zhong J, Preston R, Vil D, Shekher M, Matero A, Shah R, Swaby I K, O'Shaughnessy A, Rodriguez M, Hoffmann J, Till S, Granat S, Shohdy N, Hasegawa A, Hameed A, Lodhi M, Johnson A, Chen E, Marra M, Martienssen R, McCombie W R", "evidence": [ { "database": "UniProtKB", "id": "Q9SUW6", "url": "https://www.uniprot.org/uniprotkb/Q9SUW6" } ], "reference": [ { "type": "PubMed", "id": "10617198", "url": "https://glygen.org/publication/PubMed/10617198" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9SUW6", "url": "https://www.uniprot.org/uniprotkb/Q9SUW6" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT4G22530", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT4G22530", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q9SUW6", "url": "https://www.uniprot.org/uniprotkb/Q9SUW6" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "Q9SUW6", "url": "https://www.uniprot.org/uniprotkb/Q9SUW6" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "S-adenosylmethionine-dependent methyltransferase activity", "id": "GO:0008757", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008757", "evidence": [ { "database": "UniProtKB", "id": "Q9SUW6", "url": "https://www.uniprot.org/uniprotkb/Q9SUW6" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "methylation", "id": "GO:0032259", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0032259", "evidence": [ { "database": "UniProtKB", "id": "Q9SUW6", "url": "https://www.uniprot.org/uniprotkb/Q9SUW6" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "Q9SUW6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SUW6" }, { "id": "PF08241", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF08241" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Methyltransferase type 11", "eco_id": "ECO_0000259", "start_pos": 39, "end_pos": 134, "start_aa": "Asp", "end_aa": "Ala", "glycosite_overlap": [] } ], "binding_sites": [], "synthesized_glycans": [], 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"total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "Q9SUW7-1", "uniprot_ac": "Q9SUW7", "uniprot_id": "Q9SUW7_ARATH", "mass": { "chemical_mass": 12850.0, "monoisotopic_mass": 12850.0 }, "refseq": {}, "gene_names": [ { "name": "F7K2.100", "type": "synonym", "evidence": [ { "id": "Q9SUW7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SUW7" } ] }, { "name": "F7K2_100", "type": "synonym", "evidence": [ { "id": "Q9SUW7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SUW7" } ] } ], "protein_names": [ { "name": "Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily 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"url": "https://www.ebi.ac.uk/interpro/entry/IPR016140", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR027923", "url": "https://www.ebi.ac.uk/interpro/entry/IPR027923", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036312", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036312", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR051636", "url": "https://www.ebi.ac.uk/interpro/entry/IPR051636", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT4G22520", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT4G22520", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "TASACIC", "url": "https://omabrowser.org/oma/group/TASACIC/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "Q9SUW7", "url": "https://www.orthodb.org/?gene=Q9SUW7", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR31731", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31731", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF14547", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF14547", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "AT4G22520", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT4G22520", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9SUW7", "url": "https://www.uniprot.org/uniprotkb/Q9SUW7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9SUW7-1", "url": "https://www.uniprot.org/uniprotkb/Q9SUW7-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MASKNMMKNAIALFLTINLVFLVFTKAQAPPPQAPVCPRDSTQFLSCTNVLNLSLILINNQSVLPCCTLVTGLDAATASACICNAVRITIFNFLTINVRVNQVLRLCRIIPPLGFRCP", "length": 118, "header": "tr|Q9SUW7-1|Q9SUW7_ARATH Isoform 1 of Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=3 SV=1 CANONICAL=Q9SUW7-1" }, "isoforms": [ { "isoform_ac": "Q9SUW7-1", "url": "https://www.uniprot.org/uniprotkb/Q9SUW7/entry", "sequence": { "sequence": "MASKNMMKNAIALFLTINLVFLVFTKAQAPPPQAPVCPRDSTQFLSCTNVLNLSLILINNQSVLPCCTLVTGLDAATASACICNAVRITIFNFLTINVRVNQVLRLCRIIPPLGFRCP", "length": 118, "header": "tr|Q9SUW7-1|Q9SUW7_ARATH Isoform 1 of Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=3 SV=1 CANONICAL=Q9SUW7-1" }, "locus": { "chromosome": "4", "start_pos": 11858614, "end_pos": 11858970, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT4G22520.1", "url": "https://www.ensemblgenomes.org/id/AT4G22520.1" }, { "database": "Ensembl Peptide", "id": "AT4G22520.1", "url": "https://www.ensemblgenomes.org/id/AT4G22520.1" } ] } } ], "glycosylation": [], "phosphorylation": [], 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"https://www.ebi.ac.uk/interpro/entry/pfam/PF03478", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "AT4G22400", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT4G22400", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9SUX9", "url": "https://www.uniprot.org/uniprotkb/Q9SUX9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9SUX9-1", "url": "https://www.uniprot.org/uniprotkb/Q9SUX9-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MLSSHLSQICFSCRDPLGNLPADLIRKCTDLMDLNFAEGQRLRTLNKNWKLALPSFRKGAYREERPWLLYRERGSGETRFFDPVRERVHRGNDPRLADARFLGSTLGWLVMSESLDLNPRKTHQTFLYNPFISELQQLPELTLDSPYPTGVLRYGVLTGNPSDNNTYACLITDYLHEIGNRRDTYTLLIYYVAKTSGRWEQNWSVASMLVVGIFDTWYIESISPSPDKISIEIWPKRYDFTFQTQEWNVSNFIPVDPIQWDPFHDQSLYHVKHRLQLPENPSTLAIIIGTSTDRTRVRNKIIGDQSDDDDPRASDHIIDGVWVEVRP", "length": 327, "header": "tr|Q9SUX9-1|Q9SUX9_ARATH Isoform 1 of KIB1-4 beta-propeller domain-containing protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9SUX9-1" }, "isoforms": [ { "isoform_ac": "Q9SUX9-1", "url": "https://www.uniprot.org/uniprotkb/Q9SUX9/entry", "sequence": { "sequence": "MLSSHLSQICFSCRDPLGNLPADLIRKCTDLMDLNFAEGQRLRTLNKNWKLALPSFRKGAYREERPWLLYRERGSGETRFFDPVRERVHRGNDPRLADARFLGSTLGWLVMSESLDLNPRKTHQTFLYNPFISELQQLPELTLDSPYPTGVLRYGVLTGNPSDNNTYACLITDYLHEIGNRRDTYTLLIYYVAKTSGRWEQNWSVASMLVVGIFDTWYIESISPSPDKISIEIWPKRYDFTFQTQEWNVSNFIPVDPIQWDPFHDQSLYHVKHRLQLPENPSTLAIIIGTSTDRTRVRNKIIGDQSDDDDPRASDHIIDGVWVEVRP", "length": 327, "header": "tr|Q9SUX9-1|Q9SUX9_ARATH Isoform 1 of KIB1-4 beta-propeller domain-containing protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9SUX9-1" }, "locus": { "chromosome": "4", "start_pos": 11816729, "end_pos": 11817912, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT4G22400.1", "url": "https://www.ensemblgenomes.org/id/AT4G22400.1" }, { "database": "Ensembl Peptide", 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"database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR36616:SF4", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR36616:SF4", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "NP_190779", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_190779", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G52105", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G52105", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "AT3G52110", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G52110", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "A0A1I9LMS5", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LMS5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A1I9LMS5-1", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LMS5-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { 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"database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MEPAHIDWKRIDSRFVEDVFYEHIRAPKWFDFLAPTHFDSIDDDAWFCKPECNHPKRPEDFFSTPTSSKHPSLRDTNETLTEQNQRRRGYALSPSTPNNQESENQNPNLATPPSYQAKSWRAAIKSTSVKKMNKEVPRLKSTQSARNLFSGRDIFGHISDFCYELKRLATRVTEREDTGKSEVKESHQVGEIVNQPYSVHDLELKKERKPLLEVSKDKLPESTDVKGSTFKENRRRKKRVDDAENIPVSLNVETVKNKGEEGRRKKRMDDAENIPVPLKLETIKNKGHERFLQQIRTNPPSPQCFSENRTATLKPLRTKPTEVLKRKEDEAEEEKNRKSGESKEATRGLDVLWFLKPCTLAN", "length": 362, "header": "tr|Q9SUZ4-1|Q9SUZ4_ARATH Isoform 1 of Interferon-activable protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9SUZ4-1" }, "isoforms": [ { "isoform_ac": "A0A1I9LMS5-1", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LMS5/entry", "sequence": { "sequence": "MEPAHIDWKRIDSRFVEDVFYEHIRAPKWFDFLAPTHFDSIDDDAWFCKPECNHPKRPEDFFSTPTSSKHPSLRDTNETLTEQNQRRRGYALSPSTPNNQESENQNPNLATPPSYQAKSWRAAIKSTSVKKMNKEVPRLKSTQSARNLFSGRDIFGHISDFCYELKRLATRVTEREDTGKSEVKESHQVGEIVNQPYSVHDLELKKERKPLLEVSKDKLPESTDVKGSTFKENRRRKKRVDDAENIPVSLNVETVKNKGEEGRRKKRMDDAENIPVPLKLETIKNKGHERFLQQIRTNPPSPQCFSENRTATLKPLRTKPTVCNQHFPFPC", "length": 331, "header": "tr|A0A1I9LMS5-1|A0A1I9LMS5_ARATH Computationally mapped isoform of Interferon-activable protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9SUZ4-1" }, "locus": { "chromosome": "3", "start_pos": 19324162, "end_pos": 19325713, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G52110.3", "url": "https://www.ensemblgenomes.org/id/AT3G52110.3" }, { "database": "Ensembl Peptide", "id": "AT3G52110.3", "url": "https://www.ensemblgenomes.org/id/AT3G52110.3" } ] } }, { "isoform_ac": "A0A1I9LMS6-1", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LMS6/entry", "sequence": { "sequence": "MEPAHIDWKRIDSRFVEDVFYEHIRAPKWFDFLAPTHFDSIDDDAWFCKPECNHPKRPEDFFSTPTSSKHPSLRDTNETLTEQNQRRRGYALSPSTPNNQESENQNPNLATPPSYQAKSWRAAIKSTSVKKMNKEVPRLKSTQSARNLFSGRDIFGHISDFCYELKRLATRVTEREDTGKSEVKESHQVGEIVNQPYSVHDLELKKERKPLLEVSKDKLPESTDVKGSTFKENRRRKKRVDDAENIPVSLNVETVKNKGEEGRRKK", "length": 266, "header": "tr|A0A1I9LMS6-1|A0A1I9LMS6_ARATH Computationally mapped isoform of Interferon-activable protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9SUZ4-1" }, "locus": { "chromosome": "3", "start_pos": 19324455, "end_pos": 19325895, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G52110.4", "url": "https://www.ensemblgenomes.org/id/AT3G52110.4" }, { "database": "Ensembl Peptide", "id": "AT3G52110.4", "url": "https://www.ensemblgenomes.org/id/AT3G52110.4" } ] } }, { "isoform_ac": "A0A1I9LRS2-1", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LRS2/entry", "sequence": { "sequence": "MSDNIKLKLSLGVVELRVLVIITQIKQKNNKITICVSPEKKKQREEKKMLQLFFTIAFSAAPLTLYIPPIRCLTVFVETMEEMGMEGRVYSWRLFPRARIAWSRLLDCFFSSSRPLSS", "length": 118, "header": "tr|A0A1I9LRS2-1|A0A1I9LRS2_ARATH Computationally mapped isoform of DIS3-exonuclease-like protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9SUZ4-1" }, "locus": { "chromosome": "3", "start_pos": 19323158, "end_pos": 19323606, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G52105.2", "url": "https://www.ensemblgenomes.org/id/AT3G52105.2" }, { "database": "Ensembl Peptide", "id": "AT3G52105.2", "url": "https://www.ensemblgenomes.org/id/AT3G52105.2" } ] } }, { "isoform_ac": "F4J5R3-1", "url": "https://www.uniprot.org/uniprotkb/F4J5R3/entry", "sequence": { "sequence": "MEPAHIDWKRIDSRFVEDVFYEHIRAPKWFDFLAPTHFDSIDDDAWFCKPECNHPKRPEDFFSTPTSSKHPSLRDTNETLTEQNQRRRGYALSPSTPNNQESENQNPNLATPPSYQAKSWRAAIKSTSVKKMNKEVPRLKSTQSARNLFSGRDIFGHISDFCYELKRLATRVTEREDTGKSEVKESHQVGEIVNQPYSVHDLELKKERKPLLEVSKDKLPESTDVKGSTFKENRRRKKRMDDAENIPVPLKLETIKNKGHERFLQQIRTNPPSPQCFSENRTATLKPLRTKPTEVLKRKEDEAEEEKNRKSGESKEATRGLDVLWFLKPCTLAN", "length": 334, "header": "tr|F4J5R3-1|F4J5R3_ARATH Computationally mapped isoform of Interferon-activable protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9SUZ4-1" }, "locus": { "chromosome": "3", "start_pos": 19323750, "end_pos": 19325713, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G52110.2", "url": "https://www.ensemblgenomes.org/id/AT3G52110.2" }, { "database": "Ensembl Peptide", "id": "AT3G52110.2", "url": "https://www.ensemblgenomes.org/id/AT3G52110.2" } ] } }, { "isoform_ac": "Q9SUZ4-1", "url": "https://www.uniprot.org/uniprotkb/Q9SUZ4/entry", "sequence": { "sequence": "MEPAHIDWKRIDSRFVEDVFYEHIRAPKWFDFLAPTHFDSIDDDAWFCKPECNHPKRPEDFFSTPTSSKHPSLRDTNETLTEQNQRRRGYALSPSTPNNQESENQNPNLATPPSYQAKSWRAAIKSTSVKKMNKEVPRLKSTQSARNLFSGRDIFGHISDFCYELKRLATRVTEREDTGKSEVKESHQVGEIVNQPYSVHDLELKKERKPLLEVSKDKLPESTDVKGSTFKENRRRKKRVDDAENIPVSLNVETVKNKGEEGRRKKRMDDAENIPVPLKLETIKNKGHERFLQQIRTNPPSPQCFSENRTATLKPLRTKPTEVLKRKEDEAEEEKNRKSGESKEATRGLDVLWFLKPCTLAN", "length": 362, "header": "tr|Q9SUZ4-1|Q9SUZ4_ARATH Isoform 1 of Interferon-activable protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9SUZ4-1" }, "locus": { "chromosome": "3", "start_pos": 19323772, "end_pos": 19325895, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G52110.1", "url": "https://www.ensemblgenomes.org/id/AT3G52110.1" }, { "database": "Ensembl Peptide", "id": "AT3G52110.1", "url": "https://www.ensemblgenomes.org/id/AT3G52110.1" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "other", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 111, "start_aa": "Thr", "end_pos": 111, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr111", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ], "filter_code": "000000000000000010000.00000000001000.0.01000" } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9SUZ4", "url": "https://www.uniprot.org/uniprotkb/Q9SUZ4" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9SUZ4", "url": "https://www.uniprot.org/uniprotkb/Q9SUZ4" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G52105", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G52105", "resource": "KEGG Pathway" }, { "id": "ath:AT3G52110", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G52110", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q9SUZ4", "url": "https://www.uniprot.org/uniprotkb/Q9SUZ4" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 308, "end_pos": 310, "annotation": "n_glycosylation_sequon" }, { "start_pos": 77, "end_pos": 79, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [ 111 ], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 308, "end_pos": 310 }, { "start_pos": 77, "end_pos": 79 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 1 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 1 }, { "field": "exact_o_linked_sites", "count": 1 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 1 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 1 }, { "field": "exact_o_linked_sites", "count": 1 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": 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"count": 2 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "Q9SV00-1", "uniprot_ac": "Q9SV00", "uniprot_id": "Q9SV00_ARATH", "mass": { "chemical_mass": 10182.0, "monoisotopic_mass": 10182.0 }, "refseq": { "ac": "NP_190772", "name": "2,3-bisphosphoglycerate-dependent phosphoglycerate mutase", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_190772" }, "gene_names": [], "protein_names": [ { "name": "2,3-bisphosphoglycerate-dependent phosphoglycerate mutase", "type": "synonym", "evidence": [ { "id": "NP_190772", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_190772" }, { "id": "Q9SV00", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SV00/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9SV00", "url": "https://www.uniprot.org/uniprotkb/Q9SV00" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9SV00", "locus": {} } ], "crossref": [ { "id": "824367", "url": "https://www.ncbi.nlm.nih.gov/gene/824367", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR019034", "url": "https://www.ebi.ac.uk/interpro/entry/IPR019034", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT3G52040", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G52040", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "CNETKAA", "url": "https://omabrowser.org/oma/group/CNETKAA/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "Q9SV00", "url": "https://www.orthodb.org/?gene=Q9SV00", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR36769", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR36769", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR36769:SF1", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR36769:SF1", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF09495", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF09495", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_190772", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_190772", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G52040", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G52040", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9SV00", "url": "https://www.uniprot.org/uniprotkb/Q9SV00", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9SV00-1", "url": "https://www.uniprot.org/uniprotkb/Q9SV00-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MTQKSNQFKGQQKRKTIAPNRHGKSIQTRKGKRNVKPTKMTKEMDTDRELTKFINHCNEVKATNAACKEGGQLNIIKAESQPEPSKKSAK", "length": 90, "header": "tr|Q9SV00-1|Q9SV00_ARATH Isoform 1 of 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SV00-1" }, "isoforms": [ { "isoform_ac": "Q9SV00-1", "url": "https://www.uniprot.org/uniprotkb/Q9SV00/entry", "sequence": { "sequence": "MTQKSNQFKGQQKRKTIAPNRHGKSIQTRKGKRNVKPTKMTKEMDTDRELTKFINHCNEVKATNAACKEGGQLNIIKAESQPEPSKKSAK", "length": 90, "header": "tr|Q9SV00-1|Q9SV00_ARATH Isoform 1 of 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SV00-1" }, "locus": { "chromosome": "3", "start_pos": 19304170, "end_pos": 19304861, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": 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"https://www.ebi.ac.uk/interpro/entry/IPR045182", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT3G51930", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G51930", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "VWWVPKQ", "url": "https://omabrowser.org/oma/group/VWWVPKQ/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "Q9SV11", "url": "https://www.orthodb.org/?gene=Q9SV11", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR22844", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR22844", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR22844:SF340", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR22844:SF340", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00400", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00400", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_190761", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_190761", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G51930", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G51930", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9SV11", "url": "https://www.uniprot.org/uniprotkb/Q9SV11", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9SV11-1", "url": "https://www.uniprot.org/uniprotkb/Q9SV11-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MVRSIQEGVLMSSSSSSTTSNSNDSDGSLSPSASTKSFVLNTLRPPITGAYKPLAVLSAHVGSVSSLALCGEFLLSASQGKDIIVWQQPDLKIFAKFGQGDGSVKALVSVGSKVFTAHQDSRIRVWKVSRRNSENAFRLVDTLPTTKDYLGKFMKQSNYVQTRRNHKRLWIEHADSISCLAVHAGIIYSGSWDKTLKVWRLSDLKCLESIKAHDDAINGLVAGDGRVYSASADGKVKIWGKEKRKQIESTSSSSSSLHVLKATLEGRAEVSVNSVVVSGDGNWVYGGGSDGFVIGWEKKEKEGDFEEWRLGFETRGHNMAVLCMCVVGEMVCSGSADKSIGLWRREVTGMLCKFGVIHGHEGPVKCLQASPNNVGAGFMLYSGGLDKSLRVWWVPKQDNLEEKKSSFKTLLTQKE", "length": 415, "header": "tr|Q9SV11-1|Q9SV11_ARATH Isoform 1 of Transducin/WD40 repeat-like superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SV11-1" }, "isoforms": [ { "isoform_ac": "Q9SV11-1", "url": "https://www.uniprot.org/uniprotkb/Q9SV11/entry", "sequence": { "sequence": "MVRSIQEGVLMSSSSSSTTSNSNDSDGSLSPSASTKSFVLNTLRPPITGAYKPLAVLSAHVGSVSSLALCGEFLLSASQGKDIIVWQQPDLKIFAKFGQGDGSVKALVSVGSKVFTAHQDSRIRVWKVSRRNSENAFRLVDTLPTTKDYLGKFMKQSNYVQTRRNHKRLWIEHADSISCLAVHAGIIYSGSWDKTLKVWRLSDLKCLESIKAHDDAINGLVAGDGRVYSASADGKVKIWGKEKRKQIESTSSSSSSLHVLKATLEGRAEVSVNSVVVSGDGNWVYGGGSDGFVIGWEKKEKEGDFEEWRLGFETRGHNMAVLCMCVVGEMVCSGSADKSIGLWRREVTGMLCKFGVIHGHEGPVKCLQASPNNVGAGFMLYSGGLDKSLRVWWVPKQDNLEEKKSSFKTLLTQKE", "length": 415, "header": "tr|Q9SV11-1|Q9SV11_ARATH Isoform 1 of Transducin/WD40 repeat-like superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SV11-1" }, "locus": { "chromosome": "3", "start_pos": 19271347, "end_pos": 19273064, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G51930.1", "url": "https://www.ensemblgenomes.org/id/AT3G51930.1" }, { "database": "Ensembl Peptide", "id": "AT3G51930.1", "url": "https://www.ensemblgenomes.org/id/AT3G51930.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], 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Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9SV11", "url": "https://www.uniprot.org/uniprotkb/Q9SV11" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9SV11", "url": "https://www.uniprot.org/uniprotkb/Q9SV11" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G51930", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G51930", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q9SV11", "url": "https://www.uniprot.org/uniprotkb/Q9SV11" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 23, "end_pos": 25, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 23, "end_pos": 25 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { 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}, { "id": "MVMASFT", "url": "https://omabrowser.org/oma/group/MVMASFT/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "Q9SV14", "url": "https://www.orthodb.org/?gene=Q9SV14", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR37753", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR37753", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR37753:SF1", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR37753:SF1", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "NP_194884", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_194884", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT4G31560", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT4G31560", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9SV14", "url": "https://www.uniprot.org/uniprotkb/Q9SV14", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9SV14-1", "url": "https://www.uniprot.org/uniprotkb/Q9SV14-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MARLFVSIPMQPTQISFPASSSQPLLSPPANNFTDGGAGGLCLTRRIRDSSVVTRAGPSTSSYLLAFAIPATLIAATVFTSIKIADKLDEDFLEDIALNQAIKAAEKGENGEGDISLDDVIQEPVLQRTRNRPKREV", "length": 137, "header": "tr|Q9SV14-1|Q9SV14_ARATH Isoform 1 of High chlorophyll fluorescence 153 OS=Arabidopsis thaliana OX=3702 GN=HCF153 PE=1 SV=1 CANONICAL=Q9SV14-1" }, "isoforms": [ { "isoform_ac": "Q9SV14-1", "url": "https://www.uniprot.org/uniprotkb/Q9SV14/entry", "sequence": { "sequence": "MARLFVSIPMQPTQISFPASSSQPLLSPPANNFTDGGAGGLCLTRRIRDSSVVTRAGPSTSSYLLAFAIPATLIAATVFTSIKIADKLDEDFLEDIALNQAIKAAEKGENGEGDISLDDVIQEPVLQRTRNRPKREV", "length": 137, "header": "tr|Q9SV14-1|Q9SV14_ARATH Isoform 1 of High chlorophyll fluorescence 153 OS=Arabidopsis thaliana OX=3702 GN=HCF153 PE=1 SV=1 CANONICAL=Q9SV14-1" }, "locus": { "chromosome": "4", "start_pos": 15295138, "end_pos": 15296310, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT4G31560.1", "url": "https://www.ensemblgenomes.org/id/AT4G31560.1" }, { "database": "Ensembl Peptide", "id": "AT4G31560.1", "url": "https://www.ensemblgenomes.org/id/AT4G31560.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "1999", "authors": "Mayer K, Sch\u00fcller C, Wambutt R, Murphy G, Volckaert G, Pohl T, D\u00fcsterh\u00f6ft A, Stiekema W, Entian K D, Terryn N, Harris B, Ansorge W, Brandt P, Grivell L, Rieger M, Weichselgartner M, de Simone V, Obermaier B, Mache R, M\u00fcller M, Kreis M, Delseny M, Puigdomenech P, Watson M, Schmidtheini T, Reichert B, Portatelle D, Perez-Alonso M, Boutry M, Bancroft I, Vos P, Hoheisel J, Zimmermann W, Wedler H, Ridley P, Langham S A, McCullagh B, Bilham L, 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H, Lamar B, Yordan C, Ma P, Zhong J, Preston R, Vil D, Shekher M, Matero A, Shah R, Swaby I K, O'Shaughnessy A, Rodriguez M, Hoffmann J, Till S, Granat S, Shohdy N, Hasegawa A, Hameed A, Lodhi M, Johnson A, Chen E, Marra M, Martienssen R, McCombie W R", "evidence": [ { "database": "UniProtKB", "id": "Q9SV25", "url": "https://www.uniprot.org/uniprotkb/Q9SV25" } ], "reference": [ { "type": "PubMed", "id": "10617198", "url": "https://glygen.org/publication/PubMed/10617198" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9SV25", "url": "https://www.uniprot.org/uniprotkb/Q9SV25" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] }, { "title": "Protein 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"https://www.uniprot.org/uniprotkb/Q9SV63", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9SV63-1", "url": "https://www.uniprot.org/uniprotkb/Q9SV63-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MAKDDQHKQVLYMLSFHENFKSYSDVNNFHNMPPTEDCHYYNYSASVNGLVTFRNNTEIVIWNPTMKEHITLLQPKISKPLKIYLGYDPKENTYKLLSVANLNTLWDDYQKPHILTLGSQESWRVIKNSPDHKPTSRYYCINGVVYYNAYISSEEHRRGHNTVPAFTKEFELGVRVKHIIMSFDVRSEKFKSIQIPSSGHQYELMCYKSLMSYKGKLAWVCCNSNIIKLWVLLDAGKQEWSENEFVLPSLPQRDLLGSARLSGATSTGEFIYVSGKHFKDISAFYYDPVRKTITSVKGLYYEEFRCCYGFSNDEMACLRSYPNHIESLMSLRNIM", "length": 335, "header": "tr|Q9SV63-1|Q9SV63_ARATH Isoform 1 of F-box associated ubiquitination effector family protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9SV63-1" }, "isoforms": [ { "isoform_ac": "Q9SV63-1", "url": "https://www.uniprot.org/uniprotkb/Q9SV63/entry", "sequence": { "sequence": "MAKDDQHKQVLYMLSFHENFKSYSDVNNFHNMPPTEDCHYYNYSASVNGLVTFRNNTEIVIWNPTMKEHITLLQPKISKPLKIYLGYDPKENTYKLLSVANLNTLWDDYQKPHILTLGSQESWRVIKNSPDHKPTSRYYCINGVVYYNAYISSEEHRRGHNTVPAFTKEFELGVRVKHIIMSFDVRSEKFKSIQIPSSGHQYELMCYKSLMSYKGKLAWVCCNSNIIKLWVLLDAGKQEWSENEFVLPSLPQRDLLGSARLSGATSTGEFIYVSGKHFKDISAFYYDPVRKTITSVKGLYYEEFRCCYGFSNDEMACLRSYPNHIESLMSLRNIM", "length": 335, "header": "tr|Q9SV63-1|Q9SV63_ARATH Isoform 1 of F-box associated ubiquitination effector family protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9SV63-1" }, "locus": { "chromosome": "4", "start_pos": 7619935, "end_pos": 7621083, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT4G13060.1", "url": "https://www.ensemblgenomes.org/id/AT4G13060.1" }, { "database": "Ensembl Peptide", "id": "AT4G13060.1", "url": "https://www.ensemblgenomes.org/id/AT4G13060.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "1999", "authors": "Mayer K, Sch\u00fcller C, Wambutt R, Murphy G, Volckaert G, Pohl T, D\u00fcsterh\u00f6ft A, Stiekema W, Entian K D, Terryn N, Harris B, Ansorge W, Brandt P, Grivell L, Rieger M, Weichselgartner M, de Simone V, Obermaier B, Mache R, M\u00fcller M, Kreis M, Delseny M, Puigdomenech P, Watson M, Schmidtheini T, Reichert B, Portatelle D, Perez-Alonso M, Boutry M, Bancroft I, Vos P, Hoheisel J, Zimmermann W, Wedler H, Ridley P, Langham S A, McCullagh B, Bilham L, Robben J, Van der Schueren J, Grymonprez B, Chuang Y J, Vandenbussche F, Braeken M, Weltjens I, Voet M, Bastiaens I, Aert R, Defoor E, Weitzenegger T, Bothe G, Ramsperger U, Hilbert H, Braun M, Holzer E, Brandt A, Peters S, van Staveren M, Dirske W, Mooijman P, Klein Lankhorst R, Rose M, Hauf J, K\u00f6tter P, Berneiser S, Hempel S, Feldpausch M, Lamberth S, Van den Daele H, De Keyser A, Buysshaert C, Gielen J, Villarroel R, De Clercq R, Van Montagu M, Rogers J, Cronin A, Quail M, Bray-Allen S, Clark L, Doggett J, Hall S, Kay M, Lennard N, McLay K, Mayes R, Pettett A, Rajandream M A, Lyne M, Benes V, Rechmann S, Borkova D, Bl\u00f6cker H, Scharfe M, Grimm M, L\u00f6hnert T H, Dose S, de Haan M, Maarse A, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Fartmann B, Granderath K, Dauner D, Herzl A, Neumann S, Argiriou A, Vitale D, Liguori R, Piravandi E, Massenet O, Quigley F, Clabauld G, M\u00fcndlein A, Felber R, Schnabl S, Hiller R, Schmidt W, Lecharny A, Aubourg S, Chefdor F, Cooke R, Berger C, Montfort A, Casacuberta E, Gibbons T, Weber N, Vandenbol M, Bargues M, Terol J, Torres A, Perez-Perez A, Purnelle B, Bent E, Johnson S, Tacon D, Jesse T, Heijnen L, Schwarz S, Scholler P, Heber S, Francs P, Bielke C, Frishman D, Haase D, Lemcke K, Mewes H W, Stocker S, Zaccaria P, Bevan M, Wilson R K, de la Bastide M, Habermann K, Parnell L, Dedhia N, Gnoj L, Schutz K, Huang E, Spiegel L, Sehkon M, Murray J, Sheet P, Cordes M, Abu-Threideh J, Stoneking T, Kalicki J, Graves T, Harmon G, Edwards J, Latreille P, Courtney L, Cloud J, Abbott A, Scott K, Johnson D, Minx P, Bentley D, Fulton B, Miller N, Greco T, Kemp K, Kramer J, Fulton L, Mardis E, Dante M, Pepin K, Hillier L, Nelson J, Spieth J, Ryan E, Andrews S, Geisel C, Layman D, Du H, Ali J, Berghoff A, Jones K, Drone K, Cotton M, Joshu C, Antonoiu B, Zidanic M, Strong C, Sun H, Lamar B, Yordan C, Ma P, Zhong J, Preston R, Vil D, Shekher M, Matero A, Shah R, Swaby I K, O'Shaughnessy A, Rodriguez M, Hoffmann J, Till S, Granat S, Shohdy N, Hasegawa A, Hameed A, Lodhi M, Johnson A, Chen E, Marra M, Martienssen R, McCombie W R", "evidence": [ { "database": "UniProtKB", "id": "Q9SV63", "url": "https://www.uniprot.org/uniprotkb/Q9SV63" } ], "reference": [ { "type": "PubMed", "id": "10617198", "url": "https://glygen.org/publication/PubMed/10617198" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9SV63", "url": "https://www.uniprot.org/uniprotkb/Q9SV63" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT4G13060", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT4G13060", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q9SV63", "url": "https://www.uniprot.org/uniprotkb/Q9SV63" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 42, "end_pos": 44, "annotation": "n_glycosylation_sequon" }, { "start_pos": 55, "end_pos": 57, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "Q9SV63", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SV63" }, { "id": "PF08268", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF08268" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "F-box associated beta-propeller type 3", "eco_id": "ECO_0000259", "start_pos": 7, "end_pos": 298, "start_aa": "His", "end_aa": "Gly", "glycosite_overlap": [] } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 42, "end_pos": 44 }, { "start_pos": 55, "end_pos": 57 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", 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"table_id": "publication", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "Q9SV74-1", "uniprot_ac": "Q9SV74", "uniprot_id": "Q9SV74_ARATH", "mass": { "chemical_mass": 19614.0, "monoisotopic_mass": 19614.0 }, "refseq": {}, "gene_names": [ { "name": "F25G13.40", "type": "synonym", "evidence": [ { "id": "Q9SV74", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SV74" } ] }, { "name": "F25G13_40", "type": "synonym", "evidence": [ { "id": "Q9SV74", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SV74" } ] } ], "protein_names": [ { "name": "Fasciclin-like arabinogalactan family protein", "type": "synonym", "evidence": [ { "id": "Q9SV74", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SV74/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], 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Classification" ] }, { "id": "IPR052806", "url": "https://www.ebi.ac.uk/interpro/entry/IPR052806", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT4G12950", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT4G12950", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "FIAIHRI", "url": "https://omabrowser.org/oma/group/FIAIHRI/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "Q9SV74", "url": "https://www.orthodb.org/?gene=Q9SV74", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR33985", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR33985", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR33985:SF5", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR33985:SF5", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "AT4G12950", "url": 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"MNLLLFFLLSTVSVFAVVSGTVEETARDVIDALAHAPFEEWSSVFIETNDRIRAEVIPSTLFIPNSSANGSDDRHKLASYHIVPQRLEFADLLLKPSRSRLPTLLNGSSILVTNNSATSFSIDGVLIIELDIYVDSFIAIHRIAYPLDYTTYGGGSKLISKWPLFTFMLVTVVWFI", "length": 176, "header": "tr|Q9SV74-1|Q9SV74_ARATH Isoform 1 of Fasciclin-like arabinogalactan family protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SV74-1" }, "locus": { "chromosome": "4", "start_pos": 7576642, "end_pos": 7577172, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT4G12950.1", "url": "https://www.ensemblgenomes.org/id/AT4G12950.1" }, { "database": "Ensembl Peptide", "id": "AT4G12950.1", "url": "https://www.ensemblgenomes.org/id/AT4G12950.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "1999", "authors": "Mayer K, Sch\u00fcller C, Wambutt R, Murphy G, Volckaert G, Pohl T, D\u00fcsterh\u00f6ft A, Stiekema W, Entian K D, Terryn N, Harris B, Ansorge W, Brandt P, Grivell L, Rieger M, Weichselgartner M, de Simone V, Obermaier B, Mache R, M\u00fcller M, Kreis M, Delseny M, Puigdomenech P, Watson M, Schmidtheini T, Reichert B, Portatelle D, Perez-Alonso M, Boutry M, Bancroft I, Vos P, Hoheisel J, Zimmermann W, Wedler H, Ridley P, Langham S A, McCullagh B, Bilham L, Robben J, Van der Schueren J, Grymonprez B, Chuang Y J, Vandenbussche F, Braeken M, Weltjens I, Voet M, Bastiaens I, Aert R, Defoor E, Weitzenegger T, Bothe G, Ramsperger U, Hilbert H, Braun M, Holzer E, Brandt A, Peters S, van Staveren M, Dirske W, Mooijman P, Klein Lankhorst R, Rose M, Hauf J, K\u00f6tter P, Berneiser S, Hempel S, Feldpausch M, Lamberth S, Van den Daele H, De Keyser A, Buysshaert C, Gielen J, Villarroel R, De Clercq R, Van Montagu M, Rogers J, Cronin A, Quail M, Bray-Allen S, Clark L, Doggett J, Hall S, Kay M, Lennard N, McLay K, Mayes R, Pettett A, Rajandream M A, Lyne M, Benes 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"MSLAIKVFLLFLLVESSIALYRPDPNEKQKKYLDQSEIDYIRILRETVRGWQQEADKKYGIYSLSTSTNYMNRSLFLQDKVRGYVQLWGEWKNHQGYPYGDLRNKVHGNLWPMQYDYCRQYEGTNLLTYLMYGLSAEADMV", "length": 141, "header": "tr|Q9SV76-1|Q9SV76_ARATH Isoform 1 of Uncharacterized protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9SV76-1" }, "locus": { "chromosome": "4", "start_pos": 7573107, "end_pos": 7573746, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT4G12930.1", "url": "https://www.ensemblgenomes.org/id/AT4G12930.1" }, { "database": "Ensembl Peptide", "id": "AT4G12930.1", "url": "https://www.ensemblgenomes.org/id/AT4G12930.1" } ] } } ], "glycosylation": [], "phosphorylation": [ { "start_pos": 62, "end_pos": 62, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Tyr", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SV76", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SV76" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" } ], "site_lbl": "Tyr62" }, { "start_pos": 63, "end_pos": 63, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SV76", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SV76" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" } ], "site_lbl": "Ser63" }, { "start_pos": 70, "end_pos": 70, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Tyr", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SV76", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SV76" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" } ], "site_lbl": "Tyr70" } ], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "1999", "authors": "Mayer K, Sch\u00fcller C, Wambutt R, Murphy G, Volckaert G, Pohl T, D\u00fcsterh\u00f6ft A, Stiekema W, Entian K D, Terryn N, Harris B, Ansorge W, Brandt P, Grivell L, Rieger M, Weichselgartner M, de Simone V, Obermaier B, Mache R, M\u00fcller M, Kreis M, Delseny M, Puigdomenech P, Watson M, Schmidtheini T, Reichert B, Portatelle D, Perez-Alonso M, Boutry M, Bancroft I, Vos P, Hoheisel J, Zimmermann W, Wedler H, Ridley P, Langham S A, McCullagh B, Bilham L, Robben J, Van der Schueren J, Grymonprez B, Chuang Y J, Vandenbussche F, Braeken M, Weltjens I, Voet M, Bastiaens I, Aert R, Defoor E, Weitzenegger T, Bothe G, Ramsperger U, Hilbert H, Braun M, Holzer E, Brandt A, Peters S, van Staveren M, Dirske W, Mooijman P, Klein Lankhorst R, Rose M, Hauf J, K\u00f6tter P, Berneiser S, Hempel S, Feldpausch M, Lamberth S, Van den Daele H, De Keyser A, Buysshaert C, Gielen J, Villarroel R, De Clercq R, Van Montagu M, Rogers J, Cronin A, Quail M, Bray-Allen S, Clark L, Doggett J, Hall S, Kay M, Lennard N, McLay K, Mayes R, Pettett A, Rajandream M A, Lyne M, Benes V, Rechmann S, Borkova D, Bl\u00f6cker H, Scharfe M, Grimm M, L\u00f6hnert T H, Dose S, de Haan M, Maarse A, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Fartmann B, Granderath K, Dauner D, Herzl A, Neumann S, Argiriou A, Vitale D, Liguori R, Piravandi E, Massenet O, Quigley F, Clabauld G, M\u00fcndlein A, Felber R, Schnabl S, Hiller R, Schmidt W, Lecharny A, Aubourg S, Chefdor F, Cooke R, Berger C, Montfort A, Casacuberta E, Gibbons T, Weber N, Vandenbol M, Bargues M, Terol J, Torres A, Perez-Perez A, Purnelle B, Bent E, Johnson S, Tacon D, Jesse T, Heijnen L, Schwarz S, Scholler P, Heber S, Francs P, Bielke C, Frishman D, Haase D, Lemcke K, Mewes H W, Stocker S, Zaccaria P, Bevan M, Wilson R K, de la Bastide M, Habermann K, Parnell L, Dedhia N, Gnoj L, Schutz K, Huang E, Spiegel L, Sehkon M, Murray J, Sheet P, Cordes M, Abu-Threideh J, Stoneking T, Kalicki J, Graves T, Harmon G, Edwards J, Latreille P, Courtney L, Cloud J, Abbott A, Scott K, Johnson D, Minx P, Bentley D, Fulton B, Miller N, Greco T, Kemp K, Kramer J, Fulton L, Mardis E, Dante M, Pepin K, Hillier L, Nelson J, Spieth J, Ryan E, Andrews S, Geisel C, Layman D, Du H, Ali J, Berghoff A, Jones K, Drone K, Cotton M, Joshu C, Antonoiu B, Zidanic M, Strong C, Sun H, Lamar B, Yordan C, Ma P, Zhong J, Preston R, Vil D, Shekher M, Matero A, Shah R, Swaby I K, O'Shaughnessy A, Rodriguez M, Hoffmann J, Till S, Granat S, Shohdy N, Hasegawa A, Hameed A, Lodhi M, Johnson A, Chen E, Marra M, Martienssen R, McCombie W R", "evidence": [ { "database": "UniProtKB", "id": "Q9SV76", "url": "https://www.uniprot.org/uniprotkb/Q9SV76" } ], "reference": [ { "type": "PubMed", "id": "10617198", "url": "https://glygen.org/publication/PubMed/10617198" } ] }, { "title": "A large-scale protein phosphorylation analysis reveals novel phosphorylation motifs and phosphoregulatory networks in Arabidopsis.", "journal": "Journal of proteomics", "date": "2013-01-14", "authors": "Wang Xu, Bian Yangyang, Cheng Kai, Gu Li-Fei, Ye Mingliang, Zou Hanfa, Sun Samuel Sai-Ming, He Jun-Xian", "evidence": [ { "database": "iPTMnet", "id": "Q9SV76", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SV76" } ], "reference": [ { "type": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9SV76", "url": "https://www.uniprot.org/uniprotkb/Q9SV76" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT4G12930", "name": "", "url": 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}, { "uniprot_canonical_ac": "Q9SV79-1", "uniprot_ac": "Q9SV79", "uniprot_id": "Q9SV79_ARATH", "mass": { "chemical_mass": 26025.0, "monoisotopic_mass": 26025.0 }, "refseq": {}, "gene_names": [ { "name": "F25G13.3", "type": "synonym", "evidence": [ { "id": "Q9SV79", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SV79" } ] }, { "name": "F25G13_3", "type": "synonym", "evidence": [ { "id": "Q9SV79", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SV79" } ] } ], "protein_names": [ { "name": "Gamma interferon responsive lysosomal thiol (GILT) reductase family protein", "type": "synonym", "evidence": [ { "id": "Q9SV79", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SV79/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9SV79", "url": "https://www.uniprot.org/uniprotkb/Q9SV79" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9SV79", "locus": {} } ], "crossref": [ { "id": "826902", "url": "https://www.ncbi.nlm.nih.gov/gene/826902", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR004911", "url": "https://www.ebi.ac.uk/interpro/entry/IPR004911", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT4G12900", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT4G12900", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "FRATVCY", "url": "https://omabrowser.org/oma/group/FRATVCY/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR13234", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR13234", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR13234:SF72", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR13234:SF72", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF03227", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF03227", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "AT4G12900", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT4G12900", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9SV79", "url": "https://www.uniprot.org/uniprotkb/Q9SV79", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9SV79-1", "url": "https://www.uniprot.org/uniprotkb/Q9SV79-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MASSSSLASSTKLVFFACLLLFTFSSHNLVAGESDKVKLNLYYESLCPSCQNFIVHHLGKIFNTDLHTITDLKLIPFGNAHVSDDLTVTCQHGEEECKLNALEACAIRTWPNQRLHYKFIRCVETNTNAWESCVKKYGGEKAINDCYNGDLSKELILGYANQTLSLKPEHKYVPWMTLNGEPLYENIGDFVDLVCKAYKGKAALPKLCYSSVLSQRTMMLEFSYVDEAINH", "length": 231, "header": "tr|Q9SV79-1|Q9SV79_ARATH Isoform 1 of Gamma interferon responsive lysosomal thiol (GILT) reductase family protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SV79-1" }, "isoforms": [ { "isoform_ac": "Q9SV79-1", "url": "https://www.uniprot.org/uniprotkb/Q9SV79/entry", "sequence": { "sequence": "MASSSSLASSTKLVFFACLLLFTFSSHNLVAGESDKVKLNLYYESLCPSCQNFIVHHLGKIFNTDLHTITDLKLIPFGNAHVSDDLTVTCQHGEEECKLNALEACAIRTWPNQRLHYKFIRCVETNTNAWESCVKKYGGEKAINDCYNGDLSKELILGYANQTLSLKPEHKYVPWMTLNGEPLYENIGDFVDLVCKAYKGKAALPKLCYSSVLSQRTMMLEFSYVDEAINH", "length": 231, "header": "tr|Q9SV79-1|Q9SV79_ARATH Isoform 1 of Gamma interferon responsive lysosomal thiol (GILT) reductase family protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SV79-1" }, "locus": { "chromosome": "4", "start_pos": 7548765, "end_pos": 7550333, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT4G12900.1", "url": "https://www.ensemblgenomes.org/id/AT4G12900.1" }, { "database": "Ensembl Peptide", "id": "AT4G12900.1", "url": "https://www.ensemblgenomes.org/id/AT4G12900.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "1999", "authors": "Mayer K, Sch\u00fcller C, Wambutt R, Murphy G, Volckaert G, Pohl T, D\u00fcsterh\u00f6ft A, Stiekema W, Entian K D, Terryn N, Harris B, Ansorge W, Brandt P, Grivell L, Rieger M, Weichselgartner M, de Simone V, Obermaier B, Mache R, M\u00fcller M, Kreis M, Delseny M, Puigdomenech P, Watson M, Schmidtheini T, Reichert B, Portatelle D, Perez-Alonso M, Boutry M, Bancroft I, Vos P, Hoheisel J, Zimmermann W, 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Classification" ] }, { "id": "IPR006566", "url": "https://www.ebi.ac.uk/interpro/entry/IPR006566", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR032675", "url": "https://www.ebi.ac.uk/interpro/entry/IPR032675", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036047", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036047", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR050232", "url": "https://www.ebi.ac.uk/interpro/entry/IPR050232", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR053781", "url": "https://www.ebi.ac.uk/interpro/entry/IPR053781", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR055411", "url": "https://www.ebi.ac.uk/interpro/entry/IPR055411", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT4G10400", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT4G10400", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "YCSESEW", "url": "https://omabrowser.org/oma/group/YCSESEW/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR31900", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31900", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR31900:SF28", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31900:SF28", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00646", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00646", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF08387", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF08387", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF24758", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF24758", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PR:Q9SV82", "url": "https://proconsortium.org/cgi-bin/entry_pro?id=PR:Q9SV82", "database": "PRO", "categories": [ "Protein" ] }, { "id": "NP_192778", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_192778", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT4G10400", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT4G10400", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9SV82", "url": "https://www.uniprot.org/uniprotkb/Q9SV82", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9SV82-1", "url": "https://www.uniprot.org/uniprotkb/Q9SV82-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9SV82-2", "url": "https://www.uniprot.org/uniprotkb/Q9SV82-2", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MDRISGLPDEVLVKILSFVPTKVAVSTSILSKRWEFLWMWLTKLKFGSKRYSESEFKRLQCFLDRNLPLHRAPVIESFRLVLSDSHFKPEDIRMWVVVAVSRYIRELKIYSSHYGEKQNILPSSLYTCKSLVILKLDGGVLLDVPRMVCLPSLKTLELKGVRYFKQGSLQRLLCNCPVLEDLVVNLSHHDNMGKLTVIVPSLQRLSLSTPSSREFVIDTPSLLSFQLVDRNDNSHTFLIENMPKLREAYINVPFADIKSLIGSITSVKRLAISSEVGYGEGFIFNHLEELTLWNKYSSNLLVWFLKNSPNLRELMLVSETDDHENLGMLSWNQPSIVPECMLSSLQKFTWFKYLGRPQDRDIAVYILKNACRLRTATIKSDTRLFTKLEMITELRLSSQASSTCELNFS", "length": 409, "header": "sp|Q9SV82-1|FBD40_ARATH Isoform 1 of FBD-associated F-box protein At4g10400 OS=Arabidopsis thaliana OX=3702 GN= PE=2 SV=2 CANONICAL=Q9SV82-1" }, "isoforms": [ { "isoform_ac": "Q9SV82-1", "url": "https://www.uniprot.org/uniprotkb/Q9SV82/entry#Q9SV82-1", "sequence": { "sequence": "MDRISGLPDEVLVKILSFVPTKVAVSTSILSKRWEFLWMWLTKLKFGSKRYSESEFKRLQCFLDRNLPLHRAPVIESFRLVLSDSHFKPEDIRMWVVVAVSRYIRELKIYSSHYGEKQNILPSSLYTCKSLVILKLDGGVLLDVPRMVCLPSLKTLELKGVRYFKQGSLQRLLCNCPVLEDLVVNLSHHDNMGKLTVIVPSLQRLSLSTPSSREFVIDTPSLLSFQLVDRNDNSHTFLIENMPKLREAYINVPFADIKSLIGSITSVKRLAISSEVGYGEGFIFNHLEELTLWNKYSSNLLVWFLKNSPNLRELMLVSETDDHENLGMLSWNQPSIVPECMLSSLQKFTWFKYLGRPQDRDIAVYILKNACRLRTATIKSDTRLFTKLEMITELRLSSQASSTCELNFS", "length": 409, "header": "sp|Q9SV82-1|FBD40_ARATH Isoform 1 of FBD-associated F-box protein At4g10400 OS=Arabidopsis thaliana OX=3702 GN= PE=2 SV=2 CANONICAL=Q9SV82-1" }, "locus": { "chromosome": "4", "start_pos": 6446088, "end_pos": 6448022, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT4G10400.1", "url": "https://www.ensemblgenomes.org/id/AT4G10400.1" }, { "database": "Ensembl Peptide", "id": "AT4G10400.1", "url": "https://www.ensemblgenomes.org/id/AT4G10400.1" } ] } }, { "isoform_ac": "Q9SV82-2", "url": "https://www.uniprot.org/uniprotkb/Q9SV82/entry#Q9SV82-2", "sequence": { "sequence": "MDRISGLPDEVLVKILSFVPTKVAVSTSILSKRWEFLWMWLTKLKFGSKRYSESEFKRLQCFLDRNLPLHRAPVIESFRLVLSDSHFKPEDIRMWVVVAVSRYIRELKIYSSHYGEKQNILPSSLYTCKSLVILKLDGGVLLDVPRMVCLPSLKTLELKGVRYFKQGSLQRLLCNCPVLEDLVVNLSHHDNMGKLTVIVPSLQRLSLSTPSSREFVIDTPSLLSFQLVDRNDNSHTFLIENMPKLREAYINVPFADIKSLIGSITSVKRLAISSEVGYGEGFIFNHLEELTLWNKYSSNLLVWFLKNSPNLRELMLVSETDVSFFH", "length": 326, "header": "sp|Q9SV82-2|FBD40_ARATH Isoform 2 of FBD-associated F-box protein At4g10400 OS=Arabidopsis thaliana OX=3702 GN= PE=2 SV=2 CANONICAL=Q9SV82-1" }, "locus": {} } ], "glycosylation": [], "phosphorylation": [ { "start_pos": 206, "end_pos": 206, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SV82", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SV82" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" } ], "site_lbl": "Ser206" }, { "start_pos": 208, "end_pos": 208, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SV82", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SV82" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" } ], "site_lbl": "Ser208" }, { "start_pos": 209, "end_pos": 209, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Thr", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SV82", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SV82" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" } ], "site_lbl": "Thr209" }, { "start_pos": 211, "end_pos": 211, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SV82", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SV82" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" } ], "site_lbl": "Ser211" }, { "start_pos": 212, "end_pos": 212, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SV82", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SV82" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" } ], "site_lbl": "Ser212" } ], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "1999", "authors": "Mayer K, Sch\u00fcller C, Wambutt R, Murphy G, Volckaert G, Pohl T, D\u00fcsterh\u00f6ft A, Stiekema W, Entian K D, Terryn N, Harris B, Ansorge W, Brandt P, Grivell L, Rieger M, Weichselgartner M, de Simone V, Obermaier B, Mache R, M\u00fcller M, Kreis M, Delseny M, Puigdomenech P, Watson M, Schmidtheini T, Reichert B, Portatelle D, Perez-Alonso M, Boutry M, Bancroft I, Vos P, Hoheisel J, Zimmermann W, Wedler H, Ridley P, Langham S A, McCullagh B, Bilham L, Robben J, Van der Schueren J, Grymonprez B, Chuang Y J, Vandenbussche F, Braeken M, Weltjens I, Voet M, Bastiaens I, Aert R, Defoor E, Weitzenegger T, Bothe G, Ramsperger U, Hilbert H, Braun M, Holzer E, Brandt A, Peters S, van Staveren M, Dirske W, Mooijman P, Klein Lankhorst R, Rose M, Hauf J, K\u00f6tter P, Berneiser S, Hempel S, Feldpausch M, Lamberth S, Van den Daele H, De Keyser A, Buysshaert C, Gielen J, Villarroel R, De Clercq R, Van Montagu M, Rogers J, Cronin A, Quail M, Bray-Allen S, Clark L, Doggett J, Hall S, Kay M, Lennard N, McLay K, Mayes R, Pettett A, Rajandream M A, Lyne M, Benes V, Rechmann S, Borkova D, Bl\u00f6cker H, Scharfe M, Grimm M, L\u00f6hnert T H, Dose S, de Haan M, Maarse A, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Fartmann B, Granderath K, Dauner D, Herzl A, Neumann S, Argiriou A, Vitale D, Liguori R, Piravandi E, Massenet O, Quigley F, Clabauld G, M\u00fcndlein A, Felber R, Schnabl S, Hiller R, Schmidt W, Lecharny A, Aubourg S, Chefdor F, Cooke R, Berger C, Montfort A, Casacuberta E, Gibbons T, Weber N, Vandenbol M, Bargues M, Terol J, Torres A, Perez-Perez A, Purnelle B, Bent E, Johnson S, Tacon D, Jesse T, Heijnen L, Schwarz S, Scholler P, Heber S, Francs P, Bielke C, Frishman D, Haase D, Lemcke K, Mewes H W, Stocker S, Zaccaria P, Bevan M, Wilson R K, de la Bastide M, Habermann K, Parnell L, Dedhia N, Gnoj L, Schutz K, Huang E, Spiegel L, Sehkon M, Murray J, Sheet P, Cordes M, Abu-Threideh J, Stoneking T, Kalicki J, Graves T, Harmon G, Edwards J, Latreille P, Courtney L, Cloud J, Abbott A, Scott K, Johnson D, Minx P, Bentley D, Fulton B, Miller N, Greco T, Kemp K, Kramer J, Fulton L, Mardis E, Dante M, Pepin K, Hillier L, Nelson J, Spieth J, Ryan E, Andrews S, Geisel C, Layman D, Du H, Ali J, Berghoff A, Jones K, Drone K, Cotton M, Joshu C, Antonoiu B, Zidanic M, Strong C, Sun H, Lamar B, Yordan C, Ma P, Zhong J, Preston R, Vil D, Shekher M, Matero A, Shah R, Swaby I K, O'Shaughnessy A, Rodriguez M, Hoffmann J, Till S, Granat S, Shohdy N, Hasegawa A, Hameed A, Lodhi M, Johnson A, Chen E, Marra M, Martienssen R, McCombie W R", "evidence": [ { "database": "UniProtKB", "id": "Q9SV82", "url": "https://www.uniprot.org/uniprotkb/Q9SV82" } ], "reference": [ { "type": "PubMed", "id": "10617198", "url": "https://glygen.org/publication/PubMed/10617198" } ] }, { "title": "Quantitative phosphoproteomics identifies SnRK2 protein kinase substrates and reveals the effectors of abscisic acid action.", "journal": "Proceedings of the National Academy of Sciences of the United States of America", "date": "2013-07-02", "authors": "Wang Pengcheng, Xue Liang, Batelli Giorgia, Lee Shinyoung, Hou Yueh-Ju, Van Oosten Michael J, Zhang Huiming, Tao W Andy, Zhu Jian-Kang", "evidence": [ { "database": "iPTMnet", "id": "Q9SV82", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SV82" } ], "reference": [ { "type": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9SV82", "url": "https://www.uniprot.org/uniprotkb/Q9SV82" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT4G10400", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT4G10400", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "nucleus", 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"2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9SV88", "url": "https://www.uniprot.org/uniprotkb/Q9SV88" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT4G10330", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT4G10330", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": {}, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], 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"database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MGCIGVVNVTSINPYLTRRSNKPYNSRRPSSMAAAIRAESTEKLGITIEKNPPESKLTQLGVRSWPKWGCPPSKFPWTYSAKETCYLLQGKVKVYPNGSDEGVEIEAGDFVVFPKGMSCTWDVSVAVDKHYQFE", "length": 134, "header": "tr|Q9SV91-1|Q9SV91_ARATH Isoform 1 of RmlC-like cupins superfamily protein OS=Arabidopsis thaliana OX=3702 GN=TRR14 PE=1 SV=1 CANONICAL=Q9SV91-1" }, "isoforms": [ { "isoform_ac": "Q9SV91-1", "url": "https://www.uniprot.org/uniprotkb/Q9SV91/entry", "sequence": { "sequence": "MGCIGVVNVTSINPYLTRRSNKPYNSRRPSSMAAAIRAESTEKLGITIEKNPPESKLTQLGVRSWPKWGCPPSKFPWTYSAKETCYLLQGKVKVYPNGSDEGVEIEAGDFVVFPKGMSCTWDVSVAVDKHYQFE", "length": 134, "header": "tr|Q9SV91-1|Q9SV91_ARATH Isoform 1 of RmlC-like cupins superfamily protein OS=Arabidopsis thaliana OX=3702 GN=TRR14 PE=1 SV=1 CANONICAL=Q9SV91-1" }, "locus": { "chromosome": "4", "start_pos": 6384451, "end_pos": 6386239, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT4G10300.1", "url": 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"http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24414", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR24414:SF174", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24414:SF174", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00646", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00646", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF25210", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF25210", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PR:Q9SVA0", "url": "https://proconsortium.org/cgi-bin/entry_pro?id=PR:Q9SVA0", "database": "PRO", "categories": [ "Protein" ] }, { "id": "AT4G39580", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT4G39580", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9SVA0", "url": "https://www.uniprot.org/uniprotkb/Q9SVA0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9SVA0-1", "url": "https://www.uniprot.org/uniprotkb/Q9SVA0-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MNEEEAPSEQKKTLSLVPSPTTNLFLPDDILLSSLSRISRLYYPTFSLVSKSFRSLIASPELYQTRSILGRTESCLYVSLRLLNDSNLRWYTLCRVPDRKLTNFSGGHLLVPILSRYAPPAHWSSVVAVDYNIYAIGGPINDAPSSSVSVLDCQCEKWREAPSMRVARNYPTATVLDGKIYVAGGCEDCTSLDCIEVFDPKTQTWDSVASPGTERCERLVYKSVGIEGKYHLFGGAGHVAYDPKEGRWDSVGMDMEMGRTWVSYCVINNILFYYNDREFKWYDYKGRFWRKLMGLERLIKFLCYSRVNLAAYGEKMAVLWDTFVPSSSKNKMIWCAEITIERHDIYEICGKTEWFDVVLRVPKSYELVHVLAATV", "length": 375, "header": "sp|Q9SVA0-1|FK101_ARATH Isoform 1 of F-box/kelch-repeat protein At4g39580 OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9SVA0-1" }, "isoforms": [ { "isoform_ac": "Q9SVA0-1", "url": "https://www.uniprot.org/uniprotkb/Q9SVA0/entry#Q9SVA0-1", "sequence": { "sequence": "MNEEEAPSEQKKTLSLVPSPTTNLFLPDDILLSSLSRISRLYYPTFSLVSKSFRSLIASPELYQTRSILGRTESCLYVSLRLLNDSNLRWYTLCRVPDRKLTNFSGGHLLVPILSRYAPPAHWSSVVAVDYNIYAIGGPINDAPSSSVSVLDCQCEKWREAPSMRVARNYPTATVLDGKIYVAGGCEDCTSLDCIEVFDPKTQTWDSVASPGTERCERLVYKSVGIEGKYHLFGGAGHVAYDPKEGRWDSVGMDMEMGRTWVSYCVINNILFYYNDREFKWYDYKGRFWRKLMGLERLIKFLCYSRVNLAAYGEKMAVLWDTFVPSSSKNKMIWCAEITIERHDIYEICGKTEWFDVVLRVPKSYELVHVLAATV", "length": 375, "header": "sp|Q9SVA0-1|FK101_ARATH Isoform 1 of F-box/kelch-repeat protein At4g39580 OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9SVA0-1" }, "locus": { "chromosome": "4", "start_pos": 18385684, "end_pos": 18386811, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT4G39580.1", "url": "https://www.ensemblgenomes.org/id/AT4G39580.1" }, { "database": "Ensembl Peptide", "id": "AT4G39580.1", "url": "https://www.ensemblgenomes.org/id/AT4G39580.1" } ] } } ], "glycosylation": [], "phosphorylation": [ { "start_pos": 67, "end_pos": 67, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SVA0", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SVA0" }, { "database": "PubMed", "id": "22074104", "url": "https://glygen.org/publication/PubMed/22074104" } ], "site_lbl": "Ser67" }, { "start_pos": 79, "end_pos": 79, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SVA0", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SVA0" }, { "database": "PubMed", "id": "22074104", "url": "https://glygen.org/publication/PubMed/22074104" } ], "site_lbl": "Ser79" } ], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "1999", "authors": "Mayer K, Sch\u00fcller C, Wambutt R, Murphy G, Volckaert G, Pohl T, D\u00fcsterh\u00f6ft A, Stiekema W, Entian K D, Terryn N, Harris B, Ansorge W, Brandt P, Grivell L, Rieger M, Weichselgartner M, de Simone V, Obermaier B, Mache R, M\u00fcller M, Kreis M, Delseny M, Puigdomenech P, Watson M, Schmidtheini T, Reichert B, Portatelle D, Perez-Alonso M, Boutry M, Bancroft I, Vos P, Hoheisel J, Zimmermann W, Wedler H, Ridley P, Langham S A, McCullagh B, Bilham L, Robben J, Van der Schueren J, Grymonprez B, Chuang Y J, Vandenbussche F, Braeken M, Weltjens I, Voet M, Bastiaens I, Aert R, Defoor E, Weitzenegger T, Bothe G, Ramsperger U, Hilbert H, Braun M, Holzer E, Brandt A, Peters S, van Staveren M, Dirske W, Mooijman P, Klein Lankhorst R, Rose M, Hauf J, K\u00f6tter P, Berneiser S, Hempel S, Feldpausch M, Lamberth S, Van den Daele H, De Keyser A, Buysshaert C, Gielen J, Villarroel R, De Clercq R, Van Montagu M, Rogers J, Cronin A, Quail M, Bray-Allen S, Clark L, Doggett J, Hall S, Kay M, Lennard N, McLay K, Mayes R, Pettett A, Rajandream M A, Lyne M, Benes V, Rechmann S, Borkova D, Bl\u00f6cker H, Scharfe M, Grimm M, L\u00f6hnert T H, Dose S, de Haan M, Maarse A, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Fartmann B, Granderath K, Dauner D, Herzl A, Neumann S, Argiriou A, Vitale D, Liguori R, Piravandi E, Massenet O, Quigley F, Clabauld G, M\u00fcndlein A, Felber R, Schnabl S, Hiller R, Schmidt W, Lecharny A, Aubourg S, Chefdor F, Cooke R, Berger C, Montfort A, Casacuberta E, Gibbons T, Weber N, Vandenbol M, Bargues M, Terol J, Torres A, Perez-Perez A, Purnelle B, Bent E, Johnson S, Tacon D, Jesse T, Heijnen L, Schwarz S, Scholler P, Heber S, Francs P, Bielke C, Frishman D, Haase D, Lemcke K, Mewes H W, Stocker S, Zaccaria P, Bevan M, Wilson R K, de la Bastide M, Habermann K, Parnell L, Dedhia N, Gnoj L, Schutz K, Huang E, Spiegel L, Sehkon M, Murray J, Sheet P, Cordes M, Abu-Threideh J, Stoneking T, Kalicki J, Graves T, Harmon G, Edwards J, Latreille P, Courtney L, Cloud J, Abbott A, Scott K, Johnson D, Minx P, Bentley D, Fulton B, Miller N, Greco T, Kemp K, Kramer J, Fulton L, Mardis E, Dante M, Pepin K, Hillier L, Nelson J, Spieth J, Ryan E, Andrews S, Geisel C, Layman D, Du H, Ali J, Berghoff A, Jones K, Drone K, Cotton M, Joshu C, Antonoiu B, Zidanic M, Strong C, Sun H, Lamar B, Yordan C, Ma P, Zhong J, Preston R, Vil D, Shekher M, Matero A, Shah R, Swaby I K, O'Shaughnessy A, Rodriguez M, Hoffmann J, Till S, Granat S, Shohdy N, Hasegawa A, Hameed A, Lodhi M, Johnson A, Chen E, Marra M, Martienssen R, McCombie W R", "evidence": [ { "database": "UniProtKB", "id": "Q9SVA0", "url": "https://www.uniprot.org/uniprotkb/Q9SVA0" } ], "reference": [ { "type": "PubMed", "id": "10617198", "url": "https://glygen.org/publication/PubMed/10617198" } ] }, { "title": "Targeted quantitative phosphoproteomics approach for the detection of phospho-tyrosine signaling in plants.", "journal": "Journal of proteome research", "date": "2012-01-01", "authors": "Mithoe Sharon C, Boersema Paul J, Berke Lidija, Snel Berend, Heck Albert J R, Menke Frank L H", "evidence": [ { "database": "iPTMnet", "id": "Q9SVA0", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SVA0" } ], "reference": [ { "type": "PubMed", "id": "22074104", "url": "https://glygen.org/publication/PubMed/22074104" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9SVA0", "url": "https://www.uniprot.org/uniprotkb/Q9SVA0" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT4G39580", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT4G39580", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "Q9SVA0", "url": "https://www.uniprot.org/uniprotkb/Q9SVA0" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 103, "end_pos": 105, "annotation": "n_glycosylation_sequon" }, { "start_pos": 84, "end_pos": 86, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-Q9SVA0-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 375, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-Q9SVA0-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/Q9SVA0" } ], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [ 67, 79 ], "sequon_annotation_sites": [ { "start_pos": 103, "end_pos": 105 }, { "start_pos": 84, "end_pos": 86 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", 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0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 2 }, { "field": "total_sites", "count": 2 } ], "sort_fields": [ "start_pos", "end_pos", "kinase_uniprot_canonical_ac", "kinase_gene_name", "residue", "comment", "site_lbl" ] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 3 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "Q9SVA1-1", "uniprot_ac": "Q9SVA1", "uniprot_id": "FK100_ARATH", "mass": { "chemical_mass": 45024.0, "monoisotopic_mass": 45024.0 }, "refseq": {}, "gene_names": [ { "name": "F23K16.200", "type": "synonym", "evidence": [ { "id": "Q9SVA1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SVA1" } ] } ], "protein_names": [ { "name": "F-box/kelch-repeat protein At4g39570", "type": "recommended", "evidence": [ { "id": "Q9SVA1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SVA1/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9SVA1", "url": "https://www.uniprot.org/uniprotkb/Q9SVA1" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9SVA1", "locus": {} } ], "crossref": [ { "id": "Q9SVA1", "url": "https://alphafold.ebi.ac.uk/entry/Q9SVA1", "database": "AlphaFoldDB", "categories": [] }, { "id": "AT4G39570", "url": "https://bar.utoronto.ca/thalemine/portal.do?externalids=AT4G39570", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "cd22152", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd22152", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "830111", "url": "https://www.ncbi.nlm.nih.gov/gene/830111", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR001810", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001810", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR006652", "url": "https://www.ebi.ac.uk/interpro/entry/IPR006652", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR015915", "url": "https://www.ebi.ac.uk/interpro/entry/IPR015915", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036047", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036047", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR050354", "url": "https://www.ebi.ac.uk/interpro/entry/IPR050354", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR057499", "url": "https://www.ebi.ac.uk/interpro/entry/IPR057499", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT4G39570", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT4G39570", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "GGYMEEN", "url": "https://omabrowser.org/oma/group/GGYMEEN/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR24414", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24414", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR24414:SF184", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24414:SF184", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00646", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00646", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF25210", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF25210", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PR:Q9SVA1", "url": "https://proconsortium.org/cgi-bin/entry_pro?id=PR:Q9SVA1", "database": "PRO", "categories": [ "Protein" ] }, { "id": "AT4G39570", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT4G39570", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9SVA1", "url": "https://www.uniprot.org/uniprotkb/Q9SVA1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9SVA1-1", "url": "https://www.uniprot.org/uniprotkb/Q9SVA1-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MSSPERKRKRVTSTKNPSVKKKKKISPVPTPIPSLPDDLLVSIFARVSRLYYPILSLVSKSFRSLLRSPELYETRSLLGRTESCLYLCLQEGNPDPNPLWFTLCMKPDRTLKNGKKKKKKKMSSGNLLIPIPVPNPPLEHWSGHASVGSDIYFFGGYMEENVRSSRVVILDCRSHTLREAPSLQMERSDPAASVIDGKIYVAGGVDGDDADSLYPIEVFDIKTQIWDHRPIPYWEKDWGALSRSAYVDGKFYLTIGMKVMAYDLEESRWDFAGYQMGQSWFWSCNCVIENVLYCYGDAFRWFDTKLRLWKVMKVKGLPKLSRNVDVKIADYGGKMAIFWDNPSPSASDTNKIIRCAVIALERPNSEEIWGTVEWHEAVLTVPVSYEFEHALAVTV", "length": 395, "header": "sp|Q9SVA1-1|FK100_ARATH Isoform 1 of F-box/kelch-repeat protein At4g39570 OS=Arabidopsis thaliana OX=3702 GN= PE=2 SV=1 CANONICAL=Q9SVA1-1" }, "isoforms": [ { "isoform_ac": "Q9SVA1-1", "url": "https://www.uniprot.org/uniprotkb/Q9SVA1/entry#Q9SVA1-1", "sequence": { "sequence": 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Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9SVC7", "url": "https://www.uniprot.org/uniprotkb/Q9SVC7" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", 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H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9SVC9", "url": "https://www.uniprot.org/uniprotkb/Q9SVC9" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9SVC9", "url": "https://www.uniprot.org/uniprotkb/Q9SVC9" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G52480", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G52480", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "extracellular region", "id": "GO:0005576", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005576", "evidence": [ { "database": "UniProtKB", "id": "Q9SVC9", "url": "https://www.uniprot.org/uniprotkb/Q9SVC9" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 172, "end_pos": 174, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": 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"PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF02002", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF02002", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "AT4G20810", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT4G20810", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9SVG6", "url": "https://www.uniprot.org/uniprotkb/Q9SVG6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9SVG6-1", "url": "https://www.uniprot.org/uniprotkb/Q9SVG6-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MVKLVAKTFYDNYTPKNNNQKKSAKNGSGGIAVLVLDALTRRQWVREEDLAKELKLNTKQLRTILRYFEEQQFIMRVHRKEKSSATTNGRGEDKVKVHMYSYCCLDYSQIYDVIRYKLHRMKKEFKDVLEDKDNVQEYGCPNCKRKIFFHCENCNGELVMECNKLTSEEVVVDGSDNPRSRRDHLKDLLQNMEVRLKPLMDHINRIKDLPVPSFESFPAWETRVAKAARENGDLNPDDTLRPQGGYGSTPMPFLGETEIEVNLGEENEDVKSDEVGDSSRRKLTPSWLIKKGMNLSDEQRGEIRHEAKADDGGSSMENGDDDRNLKDEYLKAYYAAILEEQELAEKLNQQESAGKVTTDIELATSSSDRQVGMKSKREEEEEEEASVAANGNYKVDLNVEAEEAEQDENDVDWQEC", "length": 416, "header": "tr|Q9SVG6-1|Q9SVG6_ARATH Isoform 1 of Transcription initiation factor IIE (TFIIE) alpha subunit family protein / general transcription factor TFIIE family protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9SVG6-1" }, "isoforms": [ { "isoform_ac": "Q9SVG6-1", "url": "https://www.uniprot.org/uniprotkb/Q9SVG6/entry", "sequence": { "sequence": "MVKLVAKTFYDNYTPKNNNQKKSAKNGSGGIAVLVLDALTRRQWVREEDLAKELKLNTKQLRTILRYFEEQQFIMRVHRKEKSSATTNGRGEDKVKVHMYSYCCLDYSQIYDVIRYKLHRMKKEFKDVLEDKDNVQEYGCPNCKRKIFFHCENCNGELVMECNKLTSEEVVVDGSDNPRSRRDHLKDLLQNMEVRLKPLMDHINRIKDLPVPSFESFPAWETRVAKAARENGDLNPDDTLRPQGGYGSTPMPFLGETEIEVNLGEENEDVKSDEVGDSSRRKLTPSWLIKKGMNLSDEQRGEIRHEAKADDGGSSMENGDDDRNLKDEYLKAYYAAILEEQELAEKLNQQESAGKVTTDIELATSSSDRQVGMKSKREEEEEEEASVAANGNYKVDLNVEAEEAEQDENDVDWQEC", "length": 416, "header": "tr|Q9SVG6-1|Q9SVG6_ARATH Isoform 1 of Transcription initiation factor IIE (TFIIE) alpha subunit family protein / general transcription factor TFIIE family protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9SVG6-1" }, "locus": { "chromosome": "4", "start_pos": 11141427, "end_pos": 11143597, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT4G20810.1", "url": "https://www.ensemblgenomes.org/id/AT4G20810.1" }, { "database": "Ensembl Peptide", "id": "AT4G20810.1", "url": "https://www.ensemblgenomes.org/id/AT4G20810.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "1999", "authors": "Mayer K, Sch\u00fcller C, Wambutt R, Murphy G, Volckaert G, Pohl T, D\u00fcsterh\u00f6ft A, Stiekema W, Entian K D, Terryn N, Harris B, Ansorge W, Brandt P, Grivell L, Rieger M, Weichselgartner M, de Simone V, Obermaier B, Mache R, M\u00fcller M, Kreis M, Delseny M, Puigdomenech P, Watson M, Schmidtheini T, Reichert B, Portatelle D, Perez-Alonso M, Boutry M, Bancroft I, Vos P, Hoheisel J, Zimmermann W, Wedler H, Ridley P, Langham S A, McCullagh B, Bilham L, Robben J, Van der Schueren J, Grymonprez B, Chuang Y J, Vandenbussche F, Braeken M, Weltjens I, Voet M, Bastiaens I, Aert R, Defoor E, Weitzenegger T, Bothe G, Ramsperger U, Hilbert H, Braun M, Holzer E, Brandt A, Peters S, van Staveren M, Dirske W, Mooijman P, Klein Lankhorst R, Rose M, Hauf J, K\u00f6tter P, Berneiser S, Hempel S, Feldpausch M, Lamberth S, Van den Daele H, De Keyser A, Buysshaert C, Gielen J, Villarroel R, De Clercq R, Van Montagu M, Rogers J, Cronin A, Quail M, Bray-Allen S, Clark L, Doggett J, Hall S, Kay M, Lennard N, McLay K, Mayes R, Pettett A, Rajandream M A, Lyne M, Benes V, Rechmann S, Borkova D, Bl\u00f6cker H, Scharfe M, Grimm M, L\u00f6hnert T H, Dose S, de Haan M, Maarse A, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Fartmann B, Granderath K, Dauner D, Herzl A, Neumann S, Argiriou A, Vitale D, Liguori R, Piravandi E, Massenet O, Quigley F, Clabauld G, M\u00fcndlein A, Felber R, Schnabl S, Hiller R, Schmidt W, Lecharny A, Aubourg S, Chefdor F, Cooke R, Berger C, Montfort A, Casacuberta E, Gibbons T, Weber N, Vandenbol M, Bargues M, Terol J, Torres A, Perez-Perez A, Purnelle B, Bent E, Johnson S, Tacon D, Jesse T, Heijnen L, Schwarz S, Scholler P, Heber S, Francs P, Bielke C, Frishman D, Haase D, Lemcke K, Mewes H W, Stocker S, Zaccaria P, Bevan M, Wilson R K, de la Bastide M, Habermann K, Parnell L, Dedhia N, Gnoj L, Schutz K, Huang E, Spiegel L, Sehkon M, Murray J, Sheet P, Cordes M, Abu-Threideh J, Stoneking T, Kalicki J, Graves T, Harmon G, Edwards J, Latreille P, Courtney L, Cloud J, Abbott A, Scott K, Johnson D, Minx P, Bentley D, Fulton B, Miller N, Greco T, Kemp K, Kramer J, Fulton L, Mardis E, Dante M, Pepin K, Hillier L, Nelson J, Spieth J, Ryan E, Andrews S, Geisel C, Layman D, Du H, Ali J, Berghoff A, Jones K, Drone K, Cotton M, Joshu C, Antonoiu B, Zidanic M, Strong C, Sun H, Lamar B, Yordan C, Ma P, Zhong J, Preston R, Vil D, Shekher M, Matero A, Shah R, Swaby I K, O'Shaughnessy A, Rodriguez M, Hoffmann J, Till S, Granat S, Shohdy N, Hasegawa A, Hameed A, Lodhi M, Johnson A, Chen E, Marra M, Martienssen R, McCombie W R", "evidence": [ { "database": "UniProtKB", "id": "Q9SVG6", "url": "https://www.uniprot.org/uniprotkb/Q9SVG6" } ], "reference": [ { "type": "PubMed", "id": "10617198", "url": "https://glygen.org/publication/PubMed/10617198" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9SVG6", "url": "https://www.uniprot.org/uniprotkb/Q9SVG6" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT4G20810", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT4G20810", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "transcription factor TFIIE complex", "id": "GO:0005673", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005673", "evidence": [ { "database": "UniProtKB", "id": "Q9SVG6", "url": "https://www.uniprot.org/uniprotkb/Q9SVG6" } ], "pmid": "" }, { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q9SVG6", "url": "https://www.uniprot.org/uniprotkb/Q9SVG6" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "transcription initiation at RNA polymerase II promoter", "id": "GO:0006367", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006367", "evidence": [ { "database": "UniProtKB", "id": "Q9SVG6", "url": "https://www.uniprot.org/uniprotkb/Q9SVG6" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 12, "end_pos": 14, "annotation": "n_glycosylation_sequon" }, { "start_pos": 26, "end_pos": 28, "annotation": "n_glycosylation_sequon" }, { "start_pos": 294, "end_pos": 296, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], 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"authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "Q9SVG8-1", "uniprot_ac": "Q9SVG8", "uniprot_id": "Q9SVG8_ARATH", "mass": { "chemical_mass": 59726.0, "monoisotopic_mass": 59726.0 }, "refseq": { "ac": "NP_193811", "name": "Leucine-rich repeat protein kinase family protein", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_193811" }, "gene_names": [ { "name": "F21C20.140", "type": "synonym", "evidence": [ { "id": "NP_193811", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_193811" }, { "id": "Q9SVG8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SVG8" } ] }, { "name": "F21C20_140", "type": "synonym", "evidence": [ { "id": "NP_193811", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_193811" }, { "id": "Q9SVG8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SVG8" } ] } ], "protein_names": [ { "name": "Leucine-rich repeat protein kinase family protein", "type": "synonym", "evidence": [ { "id": "NP_193811", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_193811" }, { "id": "Q9SVG8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SVG8/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9SVG8", "url": "https://www.uniprot.org/uniprotkb/Q9SVG8" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9SVG8", "locus": {} } ], "crossref": [ { "id": "827827", "url": "https://www.ncbi.nlm.nih.gov/gene/827827", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "Q9SVG8", "url": "https://www.ebi.ac.uk/intact/interactors/id:Q9SVG8*", "database": "IntAct", "categories": [ "Other" ] }, { "id": "IPR000719", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000719", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR001245", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001245", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR001611", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001611", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR011009", "url": "https://www.ebi.ac.uk/interpro/entry/IPR011009", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR032675", "url": "https://www.ebi.ac.uk/interpro/entry/IPR032675", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR050647", "url": "https://www.ebi.ac.uk/interpro/entry/IPR050647", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT4G20790", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT4G20790", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "KYCPLSI", "url": "https://omabrowser.org/oma/group/KYCPLSI/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR48056", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR48056", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR48056:SF57", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR48056:SF57", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF07714", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF07714", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF13855", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF13855", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_193811", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_193811", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT4G20790", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT4G20790", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9SVG8", "url": "https://www.uniprot.org/uniprotkb/Q9SVG8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9SVG8-1", "url": "https://www.uniprot.org/uniprotkb/Q9SVG8-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": 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"Q9SVJ5", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SVJ5" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ], "site_lbl": "Ser179" } ], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "1999", "authors": "Mayer K, Sch\u00fcller C, Wambutt R, Murphy G, Volckaert G, Pohl T, D\u00fcsterh\u00f6ft A, Stiekema W, Entian K D, Terryn N, Harris B, Ansorge W, Brandt P, Grivell L, Rieger M, Weichselgartner M, de Simone V, Obermaier B, Mache R, M\u00fcller M, Kreis M, Delseny M, Puigdomenech P, Watson M, Schmidtheini T, Reichert B, Portatelle D, Perez-Alonso M, Boutry M, Bancroft I, Vos P, Hoheisel J, Zimmermann W, Wedler H, Ridley P, Langham S A, McCullagh B, Bilham L, Robben J, Van der Schueren J, Grymonprez B, Chuang Y J, Vandenbussche F, Braeken M, Weltjens I, Voet M, Bastiaens I, Aert R, Defoor E, 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"database": "UniProtKB", "id": "Q9SVJ5", "url": "https://www.uniprot.org/uniprotkb/Q9SVJ5" } ], "reference": [ { "type": "PubMed", "id": "10617198", "url": "https://glygen.org/publication/PubMed/10617198" } ] }, { "title": "Quantitative phosphoproteomics of the ataxia telangiectasia-mutated (ATM) and ataxia telangiectasia-mutated and rad3-related (ATR) dependent DNA damage response in Arabidopsis thaliana.", "journal": "Molecular & cellular proteomics : MCP", "date": "2015-03", "authors": "Roitinger Elisabeth, Hofer Manuel, K\u00f6cher Thomas, Pichler Peter, Novatchkova Maria, Yang Jianhua, Schl\u00f6gelhofer Peter, Mechtler Karl", "evidence": [ { "database": "iPTMnet", "id": "Q9SVJ5", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SVJ5" } ], "reference": [ { "type": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant 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"https://www.ensemblgenomes.org/id/AT4G13730.1" }, { "database": "Ensembl Peptide", "id": "AT4G13730.1", "url": "https://www.ensemblgenomes.org/id/AT4G13730.1" } ] } } ], "glycosylation": [], "phosphorylation": [ { "start_pos": 194, "end_pos": 194, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SVN9", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SVN9" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "28011693", "url": "https://glygen.org/publication/PubMed/28011693" } ], "site_lbl": "Ser194" }, { "start_pos": 199, "end_pos": 199, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SVN9", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SVN9" }, { "database": "PubMed", "id": "22060019", 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Ramsperger U, Hilbert H, Braun M, Holzer E, Brandt A, Peters S, van Staveren M, Dirske W, Mooijman P, Klein Lankhorst R, Rose M, Hauf J, K\u00f6tter P, Berneiser S, Hempel S, Feldpausch M, Lamberth S, Van den Daele H, De Keyser A, Buysshaert C, Gielen J, Villarroel R, De Clercq R, Van Montagu M, Rogers J, Cronin A, Quail M, Bray-Allen S, Clark L, Doggett J, Hall S, Kay M, Lennard N, McLay K, Mayes R, Pettett A, Rajandream M A, Lyne M, Benes V, Rechmann S, Borkova D, Bl\u00f6cker H, Scharfe M, Grimm M, L\u00f6hnert T H, Dose S, de Haan M, Maarse A, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Fartmann B, Granderath K, Dauner D, Herzl A, Neumann S, Argiriou A, Vitale D, Liguori R, Piravandi E, Massenet O, Quigley F, Clabauld G, M\u00fcndlein A, Felber R, Schnabl S, Hiller R, Schmidt W, Lecharny A, Aubourg S, Chefdor F, Cooke R, Berger C, Montfort A, Casacuberta E, Gibbons T, Weber N, Vandenbol M, Bargues M, Terol J, Torres A, Perez-Perez A, Purnelle B, Bent E, Johnson S, Tacon D, Jesse T, Heijnen L, Schwarz S, Scholler P, Heber S, Francs P, Bielke C, Frishman D, Haase D, Lemcke K, Mewes H W, Stocker S, Zaccaria P, Bevan M, Wilson R K, de la Bastide M, Habermann K, Parnell L, Dedhia N, Gnoj L, Schutz K, Huang E, Spiegel L, Sehkon M, Murray J, Sheet P, Cordes M, Abu-Threideh J, Stoneking T, Kalicki J, Graves T, Harmon G, Edwards J, Latreille P, Courtney L, Cloud J, Abbott A, Scott K, Johnson D, Minx P, Bentley D, Fulton B, Miller N, Greco T, Kemp K, Kramer J, Fulton L, Mardis E, Dante M, Pepin K, Hillier L, Nelson J, Spieth J, Ryan E, Andrews S, Geisel C, Layman D, Du H, Ali J, Berghoff A, Jones K, Drone K, Cotton M, Joshu C, Antonoiu B, Zidanic M, Strong C, Sun H, Lamar B, Yordan C, Ma P, Zhong J, Preston R, Vil D, Shekher M, Matero A, Shah R, Swaby I K, O'Shaughnessy A, Rodriguez M, Hoffmann J, Till S, Granat S, Shohdy N, Hasegawa A, Hameed A, Lodhi M, Johnson A, Chen E, Marra M, Martienssen R, McCombie W R", "evidence": [ { "database": "UniProtKB", "id": "Q9SVN9", "url": "https://www.uniprot.org/uniprotkb/Q9SVN9" } ], "reference": [ { "type": "PubMed", "id": "10617198", "url": "https://glygen.org/publication/PubMed/10617198" } ] }, { "title": "Nitrate and ammonium lead to distinct global dynamic phosphorylation patterns when resupplied to nitrogen-starved Arabidopsis seedlings.", "journal": "The Plant journal : for cell and molecular biology", "date": "2012-03", "authors": "Engelsberger Wolfgang R, Schulze Waltraud X", "evidence": [ { "database": "iPTMnet", "id": "Q9SVN9", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SVN9" } ], "reference": [ { "type": "PubMed", "id": "22060019", "url": "https://glygen.org/publication/PubMed/22060019" } ] }, { "title": "Quantitative phosphoproteomics of the ataxia telangiectasia-mutated (ATM) and ataxia telangiectasia-mutated and rad3-related (ATR) dependent DNA damage response in Arabidopsis thaliana.", "journal": "Molecular & cellular proteomics : MCP", "date": "2015-03", "authors": "Roitinger Elisabeth, Hofer Manuel, K\u00f6cher Thomas, Pichler Peter, Novatchkova Maria, Yang Jianhua, Schl\u00f6gelhofer Peter, Mechtler Karl", "evidence": [ { "database": "iPTMnet", "id": "Q9SVN9", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SVN9" } ], "reference": [ { "type": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9SVN9", "url": "https://www.uniprot.org/uniprotkb/Q9SVN9" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] }, { "title": "Protein Phosphatase 2Cs and Microtubule-Associated Stress Protein 1 Control Microtubule Stability, Plant Growth, and Drought Response.", "journal": "The Plant cell", "date": "2017-01", "authors": "Bhaskara Govinal Badiger, Wen Tuan-Nan, Nguyen Thao Thi, Verslues Paul E", "evidence": [ { "database": "iPTMnet", "id": "Q9SVN9", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SVN9" } ], "reference": [ { "type": "PubMed", "id": "28011693", "url": "https://glygen.org/publication/PubMed/28011693" } ] }, { "title": "Comparative qualitative phosphoproteomics analysis identifies shared phosphorylation motifs and associated biological processes in evolutionary divergent plants.", "journal": "Journal of proteomics", "date": "2018-06-15", "authors": "Al-Momani Shireen, Qi Da, Ren Zhe, Jones Andrew R", "evidence": [ { "database": "iPTMnet", "id": "Q9SVN9", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SVN9" } ], "reference": [ { "type": "PubMed", "id": "29654922", "url": "https://glygen.org/publication/PubMed/29654922" } ] } ], "pathway": [ { "id": "ath:AT4G13730", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT4G13730", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A481BAP3-1", "protein_name": "TBC1 domain family member 13", "gene_name": "TBC1D13", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MSSLHKSRIADFQDVLKEPTIALEKLRELSFSGIPCEGGLRCLCWKILLNYLPLERASWTAILAKQRELYAQFLREMIIQPGIAKANMGVSREDVTFEDHPLNPNPDSRWNTYFKDNEVLLQIDKDVRRLCPDISFFQRATEYPCLLILDPQNEFETLRKRVEQTTLKSQTVARNRSGVTNMSSPNKNSASSSVSKYEVLPNGCEAHWEVVERILFIYAKLNPGIAYVQGMNEIVGPLYYTFATDPSSEWKEHAEADTFFCFTNLMAEIRDNFIKSLDDSQCGITYKMEKVYSTLKDKDVELYLKLQEQNIKPQFFAFRWLTLLLSQEFLLPDVIRIWDSLFADDNRFDFLLLVCCAMLILIREQLLEGDFTVNMRLLQDYPITDVCQILQKAKELQDSQ", "length": 400 }, "evidence": [ { "id": "Q9SVN9", "url": "https://omabrowser.org/oma/group/Q9SVN9/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "D4AEG7-1", "protein_name": "TBC1 domain family member 13", "gene_name": "Tbc1d13", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSSLHKSRIADFQDVLKEPSIVLEKLRELSFSGIPCEGGLRCLCWKILLNYLPLERDSWDSILAKQRGLYSQFLREMIIQPGIAKANMGVSREDVTFEDHPLNPNPDSRWNTYFKDNEVLLQIDKDVRRLCPDISFFQRATEYPCLLILDPQNEFETLRKRVEQTTLKSQTVARNRSGVTNMSSPHKNNAPSALNEYEVLPNGCEAHWEVVERILFIYAKLNPGIAYVQGMNEIVGPLYYTFATDPNSEWKEHAEADTFFCFTNLMAEIRDNFIKSLDDSQCGITYKMEKVYSTLKEKDVELYLKLQEQSIKPQFFAFRWLTLLLSQEFLLPDVIRIWDSLFADGNRFDFLLLVCCAMLILIREQLLKGDFTVNMRLLQDYPISDVCKILQKAKELQDSK", "length": 400 }, "evidence": [ { "id": "Q9SVN9", "url": "https://omabrowser.org/oma/group/Q9SVN9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "F1MXD4-1", "protein_name": "TBC1 domain family member 13", "gene_name": "TBC1D13", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MSSLHKSRIADFQDVLKEPTIALEKLRELSFSGIPCEGGLRCLCWKILLNYLPLERASWTSILAKQRELYSQFLREMIIQPGIAKANMGVSREDVTFEDHPLNPNPDSRWNTYFRDNEVLLQIDKDVRRLCPDISFFQRATEYPCLLILDPQNEFETLRKRVEQTTLKSQTVARNRSGVTNMSSPQKNSAPSMNEYVVLPNGCEAHWEVVERILFIYAKLNPGIAYVQGMNEIVGPLYYTFATDPNSEWREHAEADTFFCFTNLMAEIRDNFIKSLDDSQCGITYKMEKVYSTLKDKDMELYLKLQEQNIKPQFFAFRWLTLLLSQEFVLPDVIRIWDSLFADSNRFDFLLLVCCAMLILIREQLLEGDFTVNMRLLQDYPITDVCQVLQKAKELQDSQ", "length": 399 }, "evidence": [ { "id": "Q9SVN9", "url": "https://omabrowser.org/oma/group/Q9SVN9/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "G3IJA9-1", "protein_name": "TBC1 domain family member 13", "gene_name": "Tbc1d13", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MSSLHKSRIADFQDVLKEPSIVLEKLRELSFSGIPCEGGLRCLCWKILLNYLPLERASWTSILAKQRGLYSQFLREMIIQPGIAKANMGVSREDVTFEDHPLNPNPDSRWNTYFKDNEVLLQIDKDVRRLCPDISFFQRATEYPCLLILDPQNEFETLRKRVEQTTLKSQTVARNRSGVTNMSSPHKNNAPPALNEYEVLPNGCEAHWEVVERILFIYAKLNPGIAYVQGMNEIVGPLYYTFATDPNSEWKEHAEADTFFCFTNLMAEIRDNFIKSLDDSQCGITYKMEKVYSTLKDKDVELYLKLQEQNIKPQFFAFRWLTLLLSQEFLLPDVIRIWDSLFADDNRFDFLLLVCCAMLILIREQLLEGDFTVNMRLLQDYPITDVCQILQKAKELQDSK", "length": 400 }, "evidence": [ { "id": "Q9SVN9", "url": "https://omabrowser.org/oma/group/Q9SVN9/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "Q8R3D1-1", "protein_name": "TBC1 domain family member 13", "gene_name": "Tbc1d13", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": 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"MSSLHKSRIADFQDVLKEPSIALEKLRELSFSGIPCEGGLRCLCWKILLNYLPLERASWTSILAKQRELYAQFLREMIIQPGIAKANMGVSREDVTFEDHPLNPNPDSRWNTYFKDNEVLLQIDKDVRRLCPDISFFQRATDYPCLLILDPQNEFETLRKRVEQTTLKSQTVARNRSGVTNMSSPHKNSVPSSLNEYEVLPNGCEAHWEVVERILFIYAKLNPGIAYVQGMNEIVGPLYYTFATDPNSEWKEHAEADTFFCFTNLMAEIRDNFIKSLDDSQCGITYKMEKVYSTLKDKDVELYLKLQEQNIKPQFFAFRWLTLLLSQEFLLPDVIRIWDSLFADDNRFDFLLLVCCAMLMLIREQLLEGDFTVNMRLLQDYPITDVCQILQKAKELQDSK", "length": 400 }, "evidence": [ { "id": "Q9SVN9", "url": "https://omabrowser.org/oma/group/Q9SVN9/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q9VSM8-1", "protein_name": "TBC1 domain family member 13", "gene_name": "GAPsec", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MSIFKARVKEFEDVLAGPQDLIDLKQLRKLAFNGVPDVQSFRALSWKLLLGYLGPRRSSWTTTLAQKRALYKQFIEELVLPPGHSSNRASVDGGDGDKVDSGGVGLQDHPLSEGPESAWNTFFNDNEFLLQIDKDVRRLCPDISFFQQPTDYPCEIVVHSKGEHGRRLHERVVPAVLSSANVERKGLGMTKINLITKRSVENYAAMEEGQEAHWEVVQRILFIYAKLNPGQGYVQGMNEIVGPIYYVMASDPDLTYRAHAEADCFFCFTALMSEIRDFFIKTLDDAEGGIKFMMARLSNMLKSKDLSIYELLRSQELHPQYYSFRWLTLLLSQEFPLPDVLRIWDSVFADEQRFDFLIKICCSMILIQREAILENDFASNVKLLQNYPPIDINVVIAHAGSLA", "length": 403 }, "evidence": [ { "id": "Q9SVN9", "url": "https://omabrowser.org/oma/group/Q9SVN9/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" } ], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "GTPase activator activity", "id": "GO:0005096", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005096", "evidence": [ { "database": "UniProtKB", "id": "Q9SVN9", "url": "https://www.uniprot.org/uniprotkb/Q9SVN9" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q9SVN9", "url": "https://www.uniprot.org/uniprotkb/Q9SVN9" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "Q9SVN9", "url": "https://www.uniprot.org/uniprotkb/Q9SVN9" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "intracellular protein transport", "id": "GO:0006886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006886", "evidence": [ { "database": "UniProtKB", "id": "Q9SVN9", "url": "https://www.uniprot.org/uniprotkb/Q9SVN9" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 11, "end_pos": 13, "annotation": "n_glycosylation_sequon" }, { "start_pos": 435, "end_pos": 437, "annotation": "n_glycosylation_sequon" }, { "start_pos": 77, "end_pos": 79, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "Q9SVN9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SVN9" }, { "id": "PS50086", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50086" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Rab-GAP TBC", "eco_id": "ECO_0000259", "start_pos": 126, "end_pos": 394, "start_aa": "Pro", "end_aa": "Pro", "glycosite_overlap": [] } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [ 194, 199 ], "sequon_annotation_sites": [ { "start_pos": 11, "end_pos": 13 }, { "start_pos": 435, "end_pos": 437 }, { "start_pos": 77, "end_pos": 79 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 2 }, { "field": "total_sites", "count": 2 } ], "sort_fields": [ "start_pos", "end_pos", "kinase_uniprot_canonical_ac", "kinase_gene_name", "residue", "comment", "site_lbl" ] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 6 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "Q9SVP4-1", "uniprot_ac": "Q9SVP4", "uniprot_id": "Q9SVP4_ARATH", "mass": { "chemical_mass": 39860.0, "monoisotopic_mass": 39860.0 }, "refseq": { "ac": "NP_193104", "name": "hypothetical protein (DUF295)", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_193104" }, "gene_names": [ { "name": "ATDOB3", "type": "recommended", "evidence": [ { "id": "Q9SVP4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SVP4" } ] }, { "name": "F18A5.70", "type": "synonym", "evidence": [ { "id": "NP_193104", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_193104" }, { "id": "Q9SVP4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SVP4" } ] }, { "name": "F18A5_70", "type": "synonym", "evidence": [ { "id": "NP_193104", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_193104" }, { "id": "Q9SVP4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SVP4" } ] } ], "protein_names": [ { "name": "KIB1-4 beta-propeller domain-containing protein", "type": "recommended", "evidence": [ { "id": "Q9SVP4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SVP4/entry#names_and_taxonomy" } ] }, { "name": "hypothetical protein (DUF295)", "type": "synonym", "evidence": [ { "id": "NP_193104", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_193104" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9SVP4", "url": "https://www.uniprot.org/uniprotkb/Q9SVP4" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "ATDOB3", "url": "https://www.uniprot.org/uniprotkb/Q9SVP4", "locus": {} } ], "crossref": [ { "id": "AT4G13680", "url": "https://bar.utoronto.ca/thalemine/portal.do?externalids=AT4G13680", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "827002", "url": "https://www.ncbi.nlm.nih.gov/gene/827002", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR005174", "url": "https://www.ebi.ac.uk/interpro/entry/IPR005174", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR050942", "url": "https://www.ebi.ac.uk/interpro/entry/IPR050942", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT4G13680", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT4G13680", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "EWINIRM", "url": "https://omabrowser.org/oma/group/EWINIRM/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR44259", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR44259", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR44259:SF93", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR44259:SF93", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF03478", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF03478", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_193104", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_193104", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT4G13680", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT4G13680", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9SVP4", "url": "https://www.uniprot.org/uniprotkb/Q9SVP4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9SVP4-1", "url": "https://www.uniprot.org/uniprotkb/Q9SVP4-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MSLLLNQHSKLCFRKPVLVRSSPHLSNGLSSLSLQTDSQTRVLLCADPCGGNRGIAMTMRSSRFLRTLSFEGWEEMSENEDKICAELLKEMGAIGSCGGWLPTLKDGVLRLREVNLNHETDRKRISLPPLVTLPHCQTQYVTNVAMSTSSPEEEDCVVAVKFLGPQLSFCRPAQSNSEWINIRMTDPCFFSSPVMLSKKNEMLRIAGSGGQLIGSWDLQNHSNNPKLQILRFQNLPKLSETKRELLESCYTSEHLVESITTSETFIVKLYMKTAEIDKGIPRKKTEAIMVFRLDEEGNAVYTQDIGDQSIFLTNSEAFCFPSSSSLSLGRPNFVKIVDVNEDRYFKLAKQKWDC", "length": 354, "header": "tr|Q9SVP4-1|Q9SVP4_ARATH Isoform 1 of KIB1-4 beta-propeller domain-containing protein OS=Arabidopsis thaliana OX=3702 GN=ATDOB3 PE=1 SV=1 CANONICAL=Q9SVP4-1" }, "isoforms": [ { "isoform_ac": "Q9SVP4-1", "url": "https://www.uniprot.org/uniprotkb/Q9SVP4/entry", "sequence": { "sequence": "MSLLLNQHSKLCFRKPVLVRSSPHLSNGLSSLSLQTDSQTRVLLCADPCGGNRGIAMTMRSSRFLRTLSFEGWEEMSENEDKICAELLKEMGAIGSCGGWLPTLKDGVLRLREVNLNHETDRKRISLPPLVTLPHCQTQYVTNVAMSTSSPEEEDCVVAVKFLGPQLSFCRPAQSNSEWINIRMTDPCFFSSPVMLSKKNEMLRIAGSGGQLIGSWDLQNHSNNPKLQILRFQNLPKLSETKRELLESCYTSEHLVESITTSETFIVKLYMKTAEIDKGIPRKKTEAIMVFRLDEEGNAVYTQDIGDQSIFLTNSEAFCFPSSSSLSLGRPNFVKIVDVNEDRYFKLAKQKWDC", "length": 354, "header": "tr|Q9SVP4-1|Q9SVP4_ARATH Isoform 1 of KIB1-4 beta-propeller domain-containing protein OS=Arabidopsis thaliana OX=3702 GN=ATDOB3 PE=1 SV=1 CANONICAL=Q9SVP4-1" }, "locus": { "chromosome": "4", "start_pos": 7951491, "end_pos": 7952978, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT4G13680.1", "url": "https://www.ensemblgenomes.org/id/AT4G13680.1" }, { "database": "Ensembl Peptide", "id": "AT4G13680.1", "url": "https://www.ensemblgenomes.org/id/AT4G13680.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "1999", "authors": "Mayer K, Sch\u00fcller C, Wambutt R, Murphy G, Volckaert G, Pohl T, D\u00fcsterh\u00f6ft A, Stiekema W, Entian K D, Terryn N, Harris B, Ansorge W, Brandt P, Grivell L, Rieger M, Weichselgartner M, de Simone V, Obermaier B, Mache R, M\u00fcller M, Kreis M, Delseny M, Puigdomenech P, Watson M, Schmidtheini T, Reichert B, Portatelle D, Perez-Alonso M, Boutry M, Bancroft I, Vos P, Hoheisel J, Zimmermann W, Wedler H, Ridley P, Langham S A, McCullagh B, Bilham L, Robben J, Van der Schueren J, Grymonprez B, Chuang Y J, Vandenbussche F, Braeken M, Weltjens I, Voet M, Bastiaens I, Aert R, Defoor E, Weitzenegger T, Bothe G, Ramsperger U, Hilbert H, Braun M, Holzer E, Brandt A, Peters S, van Staveren M, Dirske W, Mooijman P, Klein Lankhorst R, Rose M, Hauf J, K\u00f6tter P, Berneiser S, Hempel S, Feldpausch M, Lamberth S, Van den Daele H, De Keyser A, Buysshaert C, Gielen J, Villarroel R, De Clercq R, Van Montagu M, Rogers J, Cronin A, Quail M, Bray-Allen S, Clark L, Doggett J, Hall S, Kay M, Lennard N, McLay K, Mayes R, Pettett A, Rajandream M A, Lyne M, Benes V, Rechmann S, Borkova D, Bl\u00f6cker H, Scharfe M, Grimm M, L\u00f6hnert T H, Dose S, de Haan M, Maarse A, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Fartmann B, Granderath K, Dauner D, Herzl A, Neumann S, Argiriou A, Vitale D, Liguori R, Piravandi E, Massenet O, Quigley F, Clabauld G, M\u00fcndlein A, Felber R, Schnabl S, Hiller R, Schmidt W, Lecharny A, Aubourg S, Chefdor F, Cooke R, Berger C, Montfort A, Casacuberta E, Gibbons T, Weber N, Vandenbol M, Bargues M, Terol J, Torres A, Perez-Perez A, Purnelle B, Bent E, Johnson S, Tacon D, Jesse T, Heijnen L, Schwarz S, Scholler P, Heber S, Francs P, Bielke C, Frishman D, Haase D, Lemcke K, Mewes H W, Stocker S, Zaccaria P, Bevan M, Wilson R K, de la Bastide M, Habermann K, Parnell L, Dedhia N, Gnoj L, Schutz K, Huang E, Spiegel L, Sehkon M, Murray J, Sheet P, Cordes M, Abu-Threideh J, Stoneking T, Kalicki J, Graves T, Harmon G, Edwards J, Latreille P, Courtney L, Cloud J, Abbott A, Scott K, Johnson D, Minx P, Bentley D, Fulton B, Miller N, Greco T, Kemp K, Kramer J, Fulton L, Mardis E, Dante M, Pepin K, Hillier L, Nelson J, Spieth J, Ryan E, Andrews S, Geisel C, Layman D, Du H, Ali J, Berghoff A, Jones K, Drone K, Cotton M, Joshu C, Antonoiu B, Zidanic M, Strong C, Sun H, Lamar B, Yordan C, Ma P, Zhong J, Preston R, Vil D, Shekher M, Matero A, Shah R, Swaby I K, O'Shaughnessy A, Rodriguez M, Hoffmann J, Till S, Granat S, Shohdy N, Hasegawa A, Hameed A, Lodhi M, Johnson A, Chen E, Marra M, Martienssen R, McCombie W R", "evidence": [ { "database": "UniProtKB", "id": "Q9SVP4", "url": "https://www.uniprot.org/uniprotkb/Q9SVP4" } ], "reference": [ { "type": "PubMed", "id": "10617198", "url": "https://glygen.org/publication/PubMed/10617198" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9SVP4", "url": "https://www.uniprot.org/uniprotkb/Q9SVP4" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT4G13680", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT4G13680", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": {}, "pro_annotation": [], "site_annotation": [ { "start_pos": 220, "end_pos": 222, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "Q9SVP4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SVP4" }, { "id": "PF03478", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF03478" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "KIB1-4 beta-propeller", "eco_id": "ECO_0000259", "start_pos": 88, "end_pos": 338, "start_aa": "Leu", "end_aa": "Asp", "glycosite_overlap": [] } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 220, "end_pos": 222 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "Q9SVR4-1", "uniprot_ac": "Q9SVR4", "uniprot_id": "Q9SVR4_ARATH", "mass": { "chemical_mass": 89626.0, "monoisotopic_mass": 89626.0 }, "refseq": {}, "gene_names": [ { "name": "F17N18.20", "type": "synonym", "evidence": [ { "id": "Q9SVR4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SVR4" } ] }, { "name": "F17N18_20", "type": "synonym", "evidence": [ { "id": "Q9SVR4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SVR4" } ] } ], "protein_names": [ { "name": "Cysteine/Histidine-rich C1 domain family protein", "type": "synonym", "evidence": [ { "id": "Q9SVR4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SVR4/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9SVR4", "url": "https://www.uniprot.org/uniprotkb/Q9SVR4" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9SVR4", "locus": {} } ], "crossref": [ { "id": "AT4G13130", "url": "https://bar.utoronto.ca/thalemine/portal.do?externalids=AT4G13130", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "826927", "url": "https://www.ncbi.nlm.nih.gov/gene/826927", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR001965", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001965", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR004146", "url": "https://www.ebi.ac.uk/interpro/entry/IPR004146", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR046349", "url": "https://www.ebi.ac.uk/interpro/entry/IPR046349", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR053192", "url": "https://www.ebi.ac.uk/interpro/entry/IPR053192", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR054483", "url": "https://www.ebi.ac.uk/interpro/entry/IPR054483", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT4G13130", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT4G13130", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "PTHR32410", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR32410", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR32410:SF153", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR32410:SF153", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF03107", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF03107", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF22926", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF22926", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "AT4G13130", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT4G13130", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9SVR4", "url": "https://www.uniprot.org/uniprotkb/Q9SVR4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9SVR4-1", "url": "https://www.uniprot.org/uniprotkb/Q9SVR4-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MDSEVEENVISVITDTTFLISTNLKVDPRVISLFSQLFYDWRSVYMEIKSLYPKMEFHLLLRQILKFWTSTDMGRQWKFVSLICKIMFLVSSMDLDSESELTSLIKKIISLFNSKPDTGSELVSLITQLMRIDTSVDSDSEPTQESELLSLISQLVSAKPEPELTSLTRRIISTFISMNWEPMQFISVCPQVMVELVHGKLTTEVVRPRKAKERECELYAYEIWKSTRQIHFHCILCNGENHEEYDKVPIEVKHPLHPRHSLQLAVRQWSEEETMIECYCCDEYLMDYYYYCSSCDFAMNVSCLEKPPPVLSIDHPKWHQHPLILFPSQASFPCNLCALTHSSCPFYICPPCDFVVHQKCLSLPHVIRISRHHHRISFTPSFEKGNWYCGICRKKMDNDYGGYTCLKDGCSYVAHSRCATQKNVWDGLDLEGEPEEVEEEEVEPFVIISDGTIHHFSHPHHLRMDKNTGRDYDENKQCQACITPIYFGNIYSCMQCNFILHEECANFSRKIHNPIHPHKLNLVGGYDGVTKYYKDFCSVCPRMCTNGFFYECGKEECDRFKLHVQCATISEPLVHESHVHPLFLTSKPRERRRCGVCKKKPLSHTETFNCIEGECTFALCFGCATLPHEVRYKHDKHMLTLSYGEETSTMMYWCEACEKEINSEERFYKCDEYCCVTLHIQCLIGKELYLKPGSSFEYDHRHADVLLKTQVMSRPICFQCKSRCPHNTVIQWSELVYCTIHCFLFGRLRWDEEERRRKQAEIDNKDV", "length": 767, "header": "tr|Q9SVR4-1|Q9SVR4_ARATH Isoform 1 of Cysteine/Histidine-rich C1 domain family protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9SVR4-1" }, "isoforms": [ { "isoform_ac": "Q9SVR4-1", "url": "https://www.uniprot.org/uniprotkb/Q9SVR4/entry", "sequence": { "sequence": "MDSEVEENVISVITDTTFLISTNLKVDPRVISLFSQLFYDWRSVYMEIKSLYPKMEFHLLLRQILKFWTSTDMGRQWKFVSLICKIMFLVSSMDLDSESELTSLIKKIISLFNSKPDTGSELVSLITQLMRIDTSVDSDSEPTQESELLSLISQLVSAKPEPELTSLTRRIISTFISMNWEPMQFISVCPQVMVELVHGKLTTEVVRPRKAKERECELYAYEIWKSTRQIHFHCILCNGENHEEYDKVPIEVKHPLHPRHSLQLAVRQWSEEETMIECYCCDEYLMDYYYYCSSCDFAMNVSCLEKPPPVLSIDHPKWHQHPLILFPSQASFPCNLCALTHSSCPFYICPPCDFVVHQKCLSLPHVIRISRHHHRISFTPSFEKGNWYCGICRKKMDNDYGGYTCLKDGCSYVAHSRCATQKNVWDGLDLEGEPEEVEEEEVEPFVIISDGTIHHFSHPHHLRMDKNTGRDYDENKQCQACITPIYFGNIYSCMQCNFILHEECANFSRKIHNPIHPHKLNLVGGYDGVTKYYKDFCSVCPRMCTNGFFYECGKEECDRFKLHVQCATISEPLVHESHVHPLFLTSKPRERRRCGVCKKKPLSHTETFNCIEGECTFALCFGCATLPHEVRYKHDKHMLTLSYGEETSTMMYWCEACEKEINSEERFYKCDEYCCVTLHIQCLIGKELYLKPGSSFEYDHRHADVLLKTQVMSRPICFQCKSRCPHNTVIQWSELVYCTIHCFLFGRLRWDEEERRRKQAEIDNKDV", "length": 767, "header": "tr|Q9SVR4-1|Q9SVR4_ARATH Isoform 1 of Cysteine/Histidine-rich C1 domain family protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9SVR4-1" }, "locus": { "chromosome": "4", "start_pos": 7647237, "end_pos": 7649915, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT4G13130.1", "url": "https://www.ensemblgenomes.org/id/AT4G13130.1" }, { "database": "Ensembl Peptide", "id": "AT4G13130.1", "url": "https://www.ensemblgenomes.org/id/AT4G13130.1" } ] } } ], "glycosylation": [], "phosphorylation": [ { "start_pos": 663, "end_pos": 663, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SVR4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SVR4" }, { "database": "PubMed", "id": "22060019", "url": "https://glygen.org/publication/PubMed/22060019" } ], "site_lbl": "Ser663" } ], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "1999", "authors": "Mayer K, Sch\u00fcller C, Wambutt R, Murphy G, Volckaert G, Pohl T, D\u00fcsterh\u00f6ft A, Stiekema W, Entian K D, Terryn N, Harris B, Ansorge W, Brandt P, Grivell L, Rieger M, Weichselgartner M, de Simone V, Obermaier B, Mache R, M\u00fcller M, Kreis M, Delseny M, Puigdomenech P, Watson M, Schmidtheini T, Reichert B, Portatelle D, Perez-Alonso M, Boutry M, Bancroft I, Vos P, Hoheisel J, Zimmermann W, Wedler H, Ridley P, Langham S A, McCullagh B, Bilham L, Robben J, Van der Schueren J, Grymonprez B, Chuang Y J, Vandenbussche F, Braeken M, Weltjens I, Voet M, Bastiaens I, Aert R, Defoor E, Weitzenegger T, Bothe G, Ramsperger U, Hilbert H, Braun M, Holzer E, Brandt A, Peters S, van Staveren M, Dirske W, Mooijman P, Klein Lankhorst R, Rose M, Hauf J, K\u00f6tter P, Berneiser S, Hempel S, Feldpausch M, Lamberth S, Van den Daele H, De Keyser A, Buysshaert C, Gielen J, Villarroel R, De Clercq R, Van Montagu M, Rogers J, Cronin A, Quail M, Bray-Allen S, Clark L, Doggett J, Hall S, Kay M, Lennard N, 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"https://www.uniprot.org/uniprotkb/Q9SVW3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9SVW3-1", "url": "https://www.uniprot.org/uniprotkb/Q9SVW3-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MERTEQDSGVTKRNCLGYNRRMYLIENLTERLEDLMKRRRKAVRFGVELSFLVAEFMFLIPIEILAGETGEYSLCTKLLGVNEDDTGTSVVIGKLEEVFGVVIWKKENKEHNVDLPESIFRYDDFIRLCADATRALGKIVLALEKRQCERLKLSDLDSLFEDCQKVLMKIELKLAEMKQQVYRSVSTDYESFSKSERFDSLLRIKLMNRVIADNRFGRSVIGSYLLEIWQSLFQAEALQEL", "length": 241, "header": "tr|Q9SVW3-1|Q9SVW3_ARATH Isoform 1 of Transmembrane protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9SVW3-1" }, "isoforms": [ { "isoform_ac": "Q9SVW3-1", "url": "https://www.uniprot.org/uniprotkb/Q9SVW3/entry", "sequence": { "sequence": "MERTEQDSGVTKRNCLGYNRRMYLIENLTERLEDLMKRRRKAVRFGVELSFLVAEFMFLIPIEILAGETGEYSLCTKLLGVNEDDTGTSVVIGKLEEVFGVVIWKKENKEHNVDLPESIFRYDDFIRLCADATRALGKIVLALEKRQCERLKLSDLDSLFEDCQKVLMKIELKLAEMKQQVYRSVSTDYESFSKSERFDSLLRIKLMNRVIADNRFGRSVIGSYLLEIWQSLFQAEALQEL", "length": 241, "header": "tr|Q9SVW3-1|Q9SVW3_ARATH Isoform 1 of Transmembrane protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9SVW3-1" }, "locus": { "chromosome": "4", "start_pos": 10033199, "end_pos": 10033935, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT4G18080.1", "url": "https://www.ensemblgenomes.org/id/AT4G18080.1" }, { "database": "Ensembl Peptide", "id": "AT4G18080.1", "url": "https://www.ensemblgenomes.org/id/AT4G18080.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "1999", "authors": "Mayer K, Sch\u00fcller C, 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Pettett A, Rajandream M A, Lyne M, Benes V, Rechmann S, Borkova D, Bl\u00f6cker H, Scharfe M, Grimm M, L\u00f6hnert T H, Dose S, de Haan M, Maarse A, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Fartmann B, Granderath K, Dauner D, Herzl A, Neumann S, Argiriou A, Vitale D, Liguori R, Piravandi E, Massenet O, Quigley F, Clabauld G, M\u00fcndlein A, Felber R, Schnabl S, Hiller R, Schmidt W, Lecharny A, Aubourg S, Chefdor F, Cooke R, Berger C, Montfort A, Casacuberta E, Gibbons T, Weber N, Vandenbol M, Bargues M, Terol J, Torres A, Perez-Perez A, Purnelle B, Bent E, Johnson S, Tacon D, Jesse T, Heijnen L, Schwarz S, Scholler P, Heber S, Francs P, Bielke C, Frishman D, Haase D, Lemcke K, Mewes H W, Stocker S, Zaccaria P, Bevan M, Wilson R K, de la Bastide M, Habermann K, Parnell L, Dedhia N, Gnoj L, Schutz K, Huang E, Spiegel L, Sehkon M, Murray J, Sheet P, Cordes M, Abu-Threideh J, Stoneking T, Kalicki J, Graves T, Harmon G, Edwards J, Latreille P, Courtney L, Cloud J, Abbott A, 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"id": "Q9SVX4", "url": "https://alphafold.ebi.ac.uk/entry/Q9SVX4", "database": "AlphaFoldDB", "categories": [] }, { "id": "AT3G57590", "url": "https://bar.utoronto.ca/thalemine/portal.do?externalids=AT3G57590", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "824928", "url": "https://www.ncbi.nlm.nih.gov/gene/824928", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR001810", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001810", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR013187", "url": "https://www.ebi.ac.uk/interpro/entry/IPR013187", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR017451", "url": "https://www.ebi.ac.uk/interpro/entry/IPR017451", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036047", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036047", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT3G57590", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G57590", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "PTHR31111", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31111", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR31111:SF130", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31111:SF130", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00646", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00646", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF08268", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF08268", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PR:Q9SVX4", "url": "https://proconsortium.org/cgi-bin/entry_pro?id=PR:Q9SVX4", "database": "PRO", "categories": [ "Protein" ] }, { "id": "NP_191318", "url": 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"MEPIPNDLILEIFSRLPAKSVIGFRTLSKHWASILRSPVFTELFLTRSSNRPRLLFAAERNGEWLFFSSPQPQNRYEKSSHLDYHTKFSGDVSRFICSYVSGLLCFPDLWLSKDASPVICNPTTGMYESLPDLMRYKNARGFLGFDPIGKQFKVLSEAYPFSDQREHHEILTLGTEELSWRSNIISCPAYDRSLSEGICINGVLYYLAQTLGVPSCVIICFDVRSEEFKYFDAGCFNDQLDDTSGLILVNYEGKLSGINWKYGQAGERRTVELRMWVLEDAEKHEWVKYVYTLPENEVLDSCDFSVAGVTTRGDIVLCMKYTCKPFYVFYFNPERNTLQSVEIQDFGANLEAVENCGRVYAFVNHVEDLRVNKGKQLKSSISQVKHLCSCCNKVSQPDYHYQKA", "length": 404, "header": "sp|Q9SVX4-1|FB205_ARATH Isoform 1 of F-box protein At3g57590 OS=Arabidopsis thaliana OX=3702 GN= PE=2 SV=1 CANONICAL=Q9SVX4-1" }, "isoforms": [ { "isoform_ac": "A0A1I9LPQ0-1", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LPQ0/entry", "sequence": { "sequence": "MEPIPNDLILEIFSRLPAKSVIGFRTLSKHWASMLRSPVFTELFLTRSSNRPRLLFAAERNGLLCFPDLWLSKDASPVICNPTTGMYESLPDLMRYKNARGFLGFDPIGKQFKVLSEAYPFSDQREHHEILTLGTEELSWRSNIISCPAYDRSLSEGICINGVLYYLAQTLGVPSCVIICFDVRSEEFKYFDAGCFNDQLDDTSGLILVNYEGKLSGINWKYGQAGERRTVELRMWVLEDAEKHEWVKYVYTLPENEVLDSCDFSVAGVTTRGDIVLCMKYTCKPFYVFYFNPERNTLQSVEIQDFGANLEAVENCGRVYAFVNHVEDLRVNKGKQLKSSISQVKHLCSCCNKVSQPDYHYQKA", "length": 364, "header": "tr|A0A1I9LPQ0-1|A0A1I9LPQ0_ARATH Computationally mapped isoform of F-box and associated interaction domains-containing protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SVX4-1" }, "locus": { "chromosome": "3", "start_pos": 21329932, "end_pos": 21331426, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G57590.2", "url": "https://www.ensemblgenomes.org/id/AT3G57590.2" }, { "database": "Ensembl Peptide", "id": "AT3G57590.2", "url": "https://www.ensemblgenomes.org/id/AT3G57590.2" } ] } }, { "isoform_ac": "Q9SVX4-1", "url": 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"glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan 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a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9SVX4", "url": "https://www.uniprot.org/uniprotkb/Q9SVX4" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G57590", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G57590", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q9SVX4", "url": "https://www.uniprot.org/uniprotkb/Q9SVX4" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], 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"https://www.brenda-enzymes.org/enzyme.php?ecno=1.1.3.9&UniProtAcc=Q9SVX6", "database": "BRENDA", "categories": [ "Enzyme and Pathway" ] }, { "id": "cd02851", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd02851", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "824931", "url": "https://www.ncbi.nlm.nih.gov/gene/824931", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR009880", "url": "https://www.ebi.ac.uk/interpro/entry/IPR009880", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR011043", "url": "https://www.ebi.ac.uk/interpro/entry/IPR011043", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR013783", "url": "https://www.ebi.ac.uk/interpro/entry/IPR013783", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR014756", "url": "https://www.ebi.ac.uk/interpro/entry/IPR014756", "database": "InterPro", "categories": [ 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"https://www.ensemblgenomes.org/id/AT3G57620.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9SVX6", "url": "https://www.uniprot.org/uniprotkb/Q9SVX6" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9SVX6", "url": "https://www.uniprot.org/uniprotkb/Q9SVX6" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G57620", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G57620", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "extracellular region", "id": "GO:0005576", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005576", "evidence": [ { "database": "UniProtKB", "id": 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"species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9SW05", "url": "https://www.uniprot.org/uniprotkb/Q9SW05" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "ATCAPE2", "url": "https://www.uniprot.org/uniprotkb/Q9SW05", "locus": {} } ], "crossref": [ { "id": "cd05381", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd05381", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "828683", "url": "https://www.ncbi.nlm.nih.gov/gene/828683", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR001283", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001283", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR002413", "url": "https://www.ebi.ac.uk/interpro/entry/IPR002413", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR014044", "url": "https://www.ebi.ac.uk/interpro/entry/IPR014044", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR018244", "url": "https://www.ebi.ac.uk/interpro/entry/IPR018244", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR035940", "url": "https://www.ebi.ac.uk/interpro/entry/IPR035940", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT4G25780", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT4G25780", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "YWGYGAN", "url": "https://omabrowser.org/oma/group/YWGYGAN/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR10334", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR10334", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00188", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00188", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_194308", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_194308", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT4G25780", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT4G25780", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9SW05", "url": "https://www.uniprot.org/uniprotkb/Q9SW05", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9SW05-1", "url": "https://www.uniprot.org/uniprotkb/Q9SW05-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MSSSYLRVILLLGALNVVVSLSITNSLITKSATLGQVFRICKNLCPGCDHDSLQFLFRHNLVRAARFEPPLIWDRRLQNYAQGWANQRRGDCALRHSVSNGEFNLGENIYWGYGANWSPADAVVAWASEKRFYHYGSNTCDAGQMCGHYTQIVWKSTRRVGCARVVCDNGGIFMTCNYDPPGNYIGQKPY", "length": 190, "header": "tr|Q9SW05-1|Q9SW05_ARATH Isoform 1 of CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein OS=Arabidopsis thaliana OX=3702 GN=ATCAPE2 PE=1 SV=1 CANONICAL=Q9SW05-1" }, "isoforms": [ { "isoform_ac": "Q9SW05-1", "url": "https://www.uniprot.org/uniprotkb/Q9SW05/entry", "sequence": { "sequence": "MSSSYLRVILLLGALNVVVSLSITNSLITKSATLGQVFRICKNLCPGCDHDSLQFLFRHNLVRAARFEPPLIWDRRLQNYAQGWANQRRGDCALRHSVSNGEFNLGENIYWGYGANWSPADAVVAWASEKRFYHYGSNTCDAGQMCGHYTQIVWKSTRRVGCARVVCDNGGIFMTCNYDPPGNYIGQKPY", "length": 190, "header": "tr|Q9SW05-1|Q9SW05_ARATH Isoform 1 of CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein OS=Arabidopsis thaliana OX=3702 GN=ATCAPE2 PE=1 SV=1 CANONICAL=Q9SW05-1" }, "locus": { "chromosome": "4", "start_pos": 13120824, "end_pos": 13122042, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT4G25780.1", "url": "https://www.ensemblgenomes.org/id/AT4G25780.1" }, { "database": "Ensembl Peptide", "id": "AT4G25780.1", "url": "https://www.ensemblgenomes.org/id/AT4G25780.1" } ] } } ], "glycosylation": [], "phosphorylation": [ { "start_pos": 133, "end_pos": 133, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Tyr", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SW05", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SW05" } ], "site_lbl": "Tyr133" }, { "start_pos": 135, "end_pos": 135, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Tyr", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SW05", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SW05" } ], "site_lbl": "Tyr135" }, { "start_pos": 139, "end_pos": 139, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Thr", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SW05", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SW05" } ], "site_lbl": "Thr139" } ], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "1999", "authors": "Mayer K, Sch\u00fcller C, Wambutt R, Murphy G, Volckaert G, Pohl T, D\u00fcsterh\u00f6ft A, Stiekema W, Entian K D, Terryn N, Harris B, Ansorge W, Brandt P, Grivell L, Rieger M, Weichselgartner M, de Simone V, Obermaier B, Mache R, M\u00fcller M, Kreis M, Delseny M, Puigdomenech P, Watson M, Schmidtheini T, Reichert B, Portatelle D, Perez-Alonso M, Boutry M, Bancroft I, Vos P, Hoheisel J, Zimmermann W, Wedler H, Ridley P, Langham S A, McCullagh B, Bilham L, Robben J, Van der Schueren J, Grymonprez B, Chuang Y J, Vandenbussche F, Braeken M, Weltjens I, Voet M, Bastiaens I, Aert R, Defoor E, Weitzenegger T, Bothe G, Ramsperger U, Hilbert H, Braun M, Holzer E, Brandt A, Peters S, van Staveren M, Dirske W, Mooijman P, Klein Lankhorst R, Rose M, Hauf J, K\u00f6tter P, Berneiser S, Hempel S, Feldpausch M, Lamberth S, Van den Daele H, De Keyser A, Buysshaert C, Gielen J, Villarroel R, De Clercq R, Van Montagu M, Rogers J, Cronin A, Quail M, Bray-Allen S, Clark L, Doggett J, Hall S, Kay M, Lennard N, McLay K, Mayes R, Pettett A, Rajandream M A, Lyne M, Benes V, Rechmann S, Borkova D, Bl\u00f6cker H, Scharfe M, Grimm M, L\u00f6hnert T H, Dose S, de Haan M, Maarse A, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Fartmann B, Granderath K, Dauner D, Herzl A, Neumann S, Argiriou A, Vitale D, Liguori R, Piravandi E, Massenet O, Quigley F, Clabauld G, M\u00fcndlein A, Felber R, Schnabl S, Hiller R, Schmidt W, Lecharny A, Aubourg S, Chefdor F, Cooke R, Berger C, Montfort A, Casacuberta E, Gibbons T, Weber N, Vandenbol M, Bargues M, Terol J, Torres A, Perez-Perez A, Purnelle B, Bent E, Johnson S, Tacon D, Jesse T, Heijnen L, Schwarz S, Scholler P, Heber S, Francs P, Bielke C, Frishman D, Haase D, Lemcke K, Mewes H W, Stocker S, Zaccaria P, Bevan M, Wilson R K, de la Bastide M, Habermann K, Parnell L, Dedhia N, Gnoj L, Schutz K, Huang E, Spiegel L, Sehkon M, Murray J, Sheet P, Cordes M, Abu-Threideh J, Stoneking T, Kalicki J, Graves T, Harmon G, Edwards J, Latreille P, Courtney L, Cloud J, Abbott A, Scott K, Johnson D, Minx P, Bentley D, Fulton B, Miller N, Greco T, Kemp K, Kramer J, Fulton L, Mardis E, Dante M, Pepin K, Hillier L, Nelson J, Spieth J, Ryan E, Andrews S, Geisel C, Layman D, Du H, Ali J, Berghoff A, Jones K, Drone K, Cotton M, Joshu C, Antonoiu B, Zidanic M, Strong C, Sun H, Lamar B, Yordan C, Ma P, Zhong J, Preston R, Vil D, Shekher M, Matero A, Shah R, Swaby I K, O'Shaughnessy A, Rodriguez M, Hoffmann J, Till S, Granat S, Shohdy N, Hasegawa A, Hameed A, Lodhi M, Johnson A, Chen E, Marra M, Martienssen R, McCombie W R", "evidence": [ { "database": "UniProtKB", "id": "Q9SW05", "url": "https://www.uniprot.org/uniprotkb/Q9SW05" } ], "reference": [ { "type": "PubMed", "id": "10617198", "url": "https://glygen.org/publication/PubMed/10617198" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9SW05", "url": "https://www.uniprot.org/uniprotkb/Q9SW05" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT4G25780", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT4G25780", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "extracellular region", "id": "GO:0005576", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005576", "evidence": [ { "database": "UniProtKB", "id": "Q9SW05", "url": "https://www.uniprot.org/uniprotkb/Q9SW05" } ], "pmid": "" }, { "name": "extracellular space", "id": "GO:0005615", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005615", "evidence": [ { "database": "UniProtKB", "id": "Q9SW05", "url": "https://www.uniprot.org/uniprotkb/Q9SW05" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 116, "end_pos": 118, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "Q9SW05", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SW05" }, { "id": "SM00198", "database": "SMART", "url": "http://smart.embl.de/smart/do_annotation.pl?DOMAIN=SM00198" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "SCP", "eco_id": "ECO_0000259", "start_pos": 50, "end_pos": 186, "start_aa": "His", "end_aa": "Gly", "glycosite_overlap": [] } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [ 133, 135, 139 ], "sequon_annotation_sites": [ { "start_pos": 116, "end_pos": 118 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": 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"o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 3 }, { "field": "total_sites", "count": 3 } ], "sort_fields": [ "start_pos", "end_pos", "kinase_uniprot_canonical_ac", "kinase_gene_name", "residue", "comment", "site_lbl" ] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "Q9SW12-1", "uniprot_ac": "Q9SW12", "uniprot_id": "Q9SW12_ARATH", "mass": { "chemical_mass": 29961.0, "monoisotopic_mass": 29961.0 }, "refseq": { "ac": "NP_194245", "name": "HAD superfamily, subfamily IIIB acid phosphatase", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_194245" }, "gene_names": [ { "name": "F24A6.12", "type": "synonym", "evidence": [ { "id": "NP_194245", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_194245" }, { "id": "Q9SW12", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SW12" } ] } ], "protein_names": [ { "name": "HAD superfamily, subfamily IIIB acid phosphatase", "type": "synonym", "evidence": [ { "id": "NP_194245", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_194245" }, { "id": "Q9SW12", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SW12/entry#names_and_taxonomy" } ] } ], "function": [ { "annotation": "May function as somatic storage protein during early seedling development.", "evidence": [ { "database": "UniProtKB", "id": "Q9SW12", "url": "https://www.uniprot.org/uniprotkb/Q9SW12#function" }, { "database": "UniProtKB", "id": "PIRNR002674", "url": "https://www.uniprot.org/uniprotkb/PIRNR002674#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9SW12", "url": 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"categories": [ "Protein Classification" ] }, { "id": "IPR014403", "url": "https://www.ebi.ac.uk/interpro/entry/IPR014403", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR023214", "url": "https://www.ebi.ac.uk/interpro/entry/IPR023214", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036412", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036412", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT4G25150", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT4G25150", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "LPYYMEH", "url": "https://omabrowser.org/oma/group/LPYYMEH/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR31284", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31284", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR31284:SF7", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31284:SF7", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF03767", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF03767", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_194245", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_194245", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT4G25150", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT4G25150", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9SW12", "url": "https://www.uniprot.org/uniprotkb/Q9SW12", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9SW12-1", "url": "https://www.uniprot.org/uniprotkb/Q9SW12-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MRILVNLILFSLIPLAFSNENSSSYLIARPLIFETQLKNINDNVNLHCTSWRFAAETNNLAPWKTIPAECADYVKDYLMGEGYVVDVERVSEEAKVYASSFESNGDGKDIWIFDIDETLLSNLPYYMEHGCGLEVFDHSKFDMWVEKGIAPAIAPSLKLYQKVIHLGYKVILLTGRRENHRVITVENLRNAGFHNWDKLILRSLDDRNKTATMYKSEKREEMVKEGYRIRGNSGDQWSDLLGSAMSERSFKLPNPMYYIP", "length": 260, "header": "tr|Q9SW12-1|Q9SW12_ARATH Isoform 1 of HAD superfamily, subfamily IIIB acid phosphatase OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SW12-1" }, "isoforms": [ { "isoform_ac": "Q9SW12-1", "url": "https://www.uniprot.org/uniprotkb/Q9SW12/entry", "sequence": { "sequence": "MRILVNLILFSLIPLAFSNENSSSYLIARPLIFETQLKNINDNVNLHCTSWRFAAETNNLAPWKTIPAECADYVKDYLMGEGYVVDVERVSEEAKVYASSFESNGDGKDIWIFDIDETLLSNLPYYMEHGCGLEVFDHSKFDMWVEKGIAPAIAPSLKLYQKVIHLGYKVILLTGRRENHRVITVENLRNAGFHNWDKLILRSLDDRNKTATMYKSEKREEMVKEGYRIRGNSGDQWSDLLGSAMSERSFKLPNPMYYIP", "length": 260, "header": "tr|Q9SW12-1|Q9SW12_ARATH Isoform 1 of HAD superfamily, subfamily IIIB acid phosphatase OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SW12-1" }, "locus": { "chromosome": "4", "start_pos": 12901534, "end_pos": 12903151, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT4G25150.1", "url": "https://www.ensemblgenomes.org/id/AT4G25150.1" }, { "database": "Ensembl Peptide", "id": "AT4G25150.1", "url": "https://www.ensemblgenomes.org/id/AT4G25150.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "1999", "authors": "Mayer K, Sch\u00fcller C, Wambutt R, Murphy G, Volckaert G, Pohl T, D\u00fcsterh\u00f6ft A, Stiekema W, Entian K D, Terryn N, Harris B, Ansorge W, Brandt P, Grivell L, Rieger M, Weichselgartner M, de Simone V, Obermaier B, Mache R, M\u00fcller M, Kreis M, Delseny M, Puigdomenech P, Watson M, Schmidtheini T, Reichert B, Portatelle D, Perez-Alonso M, Boutry M, Bancroft I, Vos P, Hoheisel J, Zimmermann W, Wedler H, Ridley P, Langham S A, McCullagh B, Bilham L, Robben J, Van der Schueren J, Grymonprez B, Chuang Y J, Vandenbussche F, Braeken M, Weltjens I, Voet M, Bastiaens I, Aert R, Defoor E, Weitzenegger T, Bothe G, Ramsperger U, Hilbert H, Braun M, Holzer E, Brandt A, Peters S, van Staveren M, Dirske W, Mooijman P, Klein Lankhorst R, Rose M, Hauf J, K\u00f6tter P, Berneiser S, Hempel S, Feldpausch M, Lamberth S, Van den Daele H, De Keyser A, Buysshaert C, Gielen J, Villarroel R, De Clercq R, Van Montagu M, Rogers J, Cronin A, Quail M, Bray-Allen S, Clark L, Doggett J, Hall S, Kay M, Lennard N, McLay K, Mayes R, Pettett A, Rajandream M A, Lyne M, Benes V, Rechmann S, Borkova D, Bl\u00f6cker H, Scharfe M, Grimm M, L\u00f6hnert T H, Dose S, de Haan M, Maarse A, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Fartmann B, Granderath K, Dauner D, Herzl A, Neumann S, Argiriou A, Vitale D, Liguori R, Piravandi E, Massenet O, Quigley F, Clabauld G, M\u00fcndlein A, Felber R, Schnabl S, Hiller R, Schmidt W, Lecharny A, Aubourg S, Chefdor F, Cooke R, Berger C, Montfort A, Casacuberta E, Gibbons T, Weber N, Vandenbol M, Bargues M, Terol J, Torres A, Perez-Perez A, Purnelle B, Bent E, Johnson S, Tacon D, Jesse T, Heijnen L, Schwarz S, Scholler P, Heber S, Francs P, Bielke C, Frishman D, Haase D, Lemcke K, Mewes H W, Stocker S, Zaccaria P, Bevan M, Wilson R K, de la Bastide M, Habermann K, Parnell L, Dedhia N, Gnoj L, Schutz K, Huang E, Spiegel L, Sehkon M, Murray J, Sheet P, Cordes M, Abu-Threideh J, Stoneking T, Kalicki J, Graves T, Harmon G, Edwards J, Latreille P, Courtney L, Cloud J, Abbott A, Scott K, Johnson D, Minx P, Bentley D, Fulton B, Miller N, Greco T, Kemp K, Kramer J, Fulton L, Mardis E, Dante M, Pepin K, Hillier L, Nelson J, Spieth J, Ryan E, Andrews S, Geisel C, Layman D, Du H, Ali J, Berghoff A, Jones K, Drone K, Cotton M, Joshu C, Antonoiu B, Zidanic M, Strong C, Sun H, Lamar B, Yordan C, Ma P, Zhong J, Preston R, Vil D, Shekher M, Matero A, Shah R, Swaby I K, O'Shaughnessy A, Rodriguez M, Hoffmann J, Till S, Granat S, Shohdy N, Hasegawa A, Hameed A, Lodhi M, Johnson A, Chen E, Marra M, Martienssen R, McCombie W R", "evidence": [ { "database": "UniProtKB", "id": "Q9SW12", "url": "https://www.uniprot.org/uniprotkb/Q9SW12" } ], "reference": [ { "type": "PubMed", "id": "10617198", "url": "https://glygen.org/publication/PubMed/10617198" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9SW12", "url": "https://www.uniprot.org/uniprotkb/Q9SW12" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT4G25150", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT4G25150", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "acid phosphatase activity", "id": "GO:0003993", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003993", "evidence": [ { "database": "UniProtKB", "id": "Q9SW12", "url": "https://www.uniprot.org/uniprotkb/Q9SW12" } ], "pmid": "" }, { "name": "nutrient reservoir activity", "id": "GO:0045735", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045735", "evidence": [ { "database": "UniProtKB", "id": "Q9SW12", "url": "https://www.uniprot.org/uniprotkb/Q9SW12" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "chloroplast", "id": "GO:0009507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009507", "evidence": [ { "database": "UniProtKB", "id": "Q9SW12", "url": "https://www.uniprot.org/uniprotkb/Q9SW12" } ], "pmid": "" } ] } ] }, "pro_annotation": 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"n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": 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41842.0 }, "refseq": {}, "gene_names": [ { "name": "F13M23.160", "type": "synonym", "evidence": [ { "id": "Q9SW24", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SW24" } ] }, { "name": "F13M23_160", "type": "synonym", "evidence": [ { "id": "Q9SW24", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SW24" } ] } ], "protein_names": [ { "name": "D111/G-patch domain-containing protein", "type": "synonym", "evidence": [ { "id": "Q9SW24", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SW24/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9SW24", "url": "https://www.uniprot.org/uniprotkb/Q9SW24" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9SW24", "locus": {} } ], "crossref": [ { "id": "AT4G25020", "url": "https://bar.utoronto.ca/thalemine/portal.do?externalids=AT4G25020", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "828605", "url": "https://www.ncbi.nlm.nih.gov/gene/828605", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR000467", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000467", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR026822", "url": "https://www.ebi.ac.uk/interpro/entry/IPR026822", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR045166", "url": "https://www.ebi.ac.uk/interpro/entry/IPR045166", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT4G25020", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT4G25020", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "VIHSAPR", "url": "https://omabrowser.org/oma/group/VIHSAPR/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR15818", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR15818", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR15818:SF2", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR15818:SF2", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF12656", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF12656", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF25088", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF25088", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "AT4G25020", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT4G25020", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9SW24", "url": "https://www.uniprot.org/uniprotkb/Q9SW24", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9SW24-1", "url": "https://www.uniprot.org/uniprotkb/Q9SW24-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MKLSFSLPPKSKSRVSLNSDRKDCIGAGNLKQFVTEFDPSETLTDSKPKYVIPPIEDRRRSYRSIDLPLPSASGLQFEAEIPSGDGSDNNITYGLNLRQKVENVEKPEPVEKMLLKSMRTDLESLPDAPEKEDFESFPVDGFGEALLAGYGWKPGQGIGLKAKEDVKIVEYEKWSGNEGFGFGKSDKAMKMIDNKLVGSGSHEEVKVGINKIENMEKDRVVRKRNRETEGESRTEVKACKQNYRGQTRETREKTSWLRSHIKVRIISKDVKGGRLYLKKAVVTDVVGPTSCDIAMDETQELVQGIDQELLETALPRRGGSVLVLSGRHKGVYGRLVEKDLDKETGVVCDADSQEMLHVKLDQVAEYIGDPADIGY", "length": 375, "header": "tr|Q9SW24-1|Q9SW24_ARATH Isoform 1 of D111/G-patch domain-containing protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SW24-1" }, "isoforms": [ { "isoform_ac": "Q9SW24-1", "url": "https://www.uniprot.org/uniprotkb/Q9SW24/entry", "sequence": { "sequence": "MKLSFSLPPKSKSRVSLNSDRKDCIGAGNLKQFVTEFDPSETLTDSKPKYVIPPIEDRRRSYRSIDLPLPSASGLQFEAEIPSGDGSDNNITYGLNLRQKVENVEKPEPVEKMLLKSMRTDLESLPDAPEKEDFESFPVDGFGEALLAGYGWKPGQGIGLKAKEDVKIVEYEKWSGNEGFGFGKSDKAMKMIDNKLVGSGSHEEVKVGINKIENMEKDRVVRKRNRETEGESRTEVKACKQNYRGQTRETREKTSWLRSHIKVRIISKDVKGGRLYLKKAVVTDVVGPTSCDIAMDETQELVQGIDQELLETALPRRGGSVLVLSGRHKGVYGRLVEKDLDKETGVVCDADSQEMLHVKLDQVAEYIGDPADIGY", "length": 375, "header": "tr|Q9SW24-1|Q9SW24_ARATH Isoform 1 of D111/G-patch domain-containing protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SW24-1" }, "locus": { "chromosome": "4", "start_pos": 12860332, "end_pos": 12861975, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT4G25020.1", "url": "https://www.ensemblgenomes.org/id/AT4G25020.1" }, { "database": "Ensembl Peptide", "id": "AT4G25020.1", "url": "https://www.ensemblgenomes.org/id/AT4G25020.1" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "other", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 289, "start_aa": "Thr", "end_pos": 289, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr289", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ], "filter_code": "000000000000000010000.00000000001000.0.01000" } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "1999", "authors": "Mayer K, Sch\u00fcller C, Wambutt R, Murphy G, Volckaert G, Pohl T, D\u00fcsterh\u00f6ft A, Stiekema W, Entian K D, Terryn N, Harris B, Ansorge W, Brandt P, Grivell L, Rieger M, Weichselgartner M, de Simone V, Obermaier B, Mache R, M\u00fcller M, 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M A, Lyne M, Benes V, Rechmann S, Borkova D, Bl\u00f6cker H, Scharfe M, Grimm M, L\u00f6hnert T H, Dose S, de Haan M, Maarse A, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Fartmann B, Granderath K, Dauner D, Herzl A, Neumann S, Argiriou A, Vitale D, Liguori R, Piravandi E, Massenet O, Quigley F, Clabauld G, M\u00fcndlein A, Felber R, Schnabl S, Hiller R, Schmidt W, Lecharny A, Aubourg S, Chefdor F, Cooke R, Berger C, Montfort A, Casacuberta E, Gibbons T, Weber N, Vandenbol M, Bargues M, Terol J, Torres A, Perez-Perez A, Purnelle B, Bent E, Johnson S, Tacon D, Jesse T, Heijnen L, Schwarz S, Scholler P, Heber S, Francs P, Bielke C, Frishman D, Haase D, Lemcke K, Mewes H W, Stocker S, Zaccaria P, Bevan M, Wilson R K, de la Bastide M, Habermann K, Parnell L, Dedhia N, Gnoj L, Schutz K, Huang E, Spiegel L, Sehkon M, Murray J, Sheet P, Cordes M, Abu-Threideh J, Stoneking T, Kalicki J, Graves T, Harmon G, Edwards J, Latreille P, Courtney L, Cloud J, Abbott A, Scott K, Johnson D, Minx P, Bentley D, Fulton B, Miller N, Greco T, Kemp K, Kramer J, Fulton L, Mardis E, Dante M, Pepin K, Hillier L, Nelson J, Spieth J, Ryan E, Andrews S, Geisel C, Layman D, Du H, Ali J, Berghoff A, Jones K, Drone K, Cotton M, Joshu C, Antonoiu B, Zidanic M, Strong C, Sun H, Lamar B, Yordan C, Ma P, Zhong J, Preston R, Vil D, Shekher M, Matero A, Shah R, Swaby I K, O'Shaughnessy A, Rodriguez M, Hoffmann J, Till S, Granat S, Shohdy N, Hasegawa A, Hameed A, Lodhi M, Johnson A, Chen E, Marra M, Martienssen R, McCombie W R", "evidence": [ { "database": "UniProtKB", "id": "Q9SW40", "url": "https://www.uniprot.org/uniprotkb/Q9SW40" } ], "reference": [ { "type": "PubMed", "id": "10617198", "url": "https://glygen.org/publication/PubMed/10617198" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town 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"Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_195219", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_195219", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT4G34930", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT4G34930", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9SW42", "url": "https://www.uniprot.org/uniprotkb/Q9SW42", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9SW42-1", "url": "https://www.uniprot.org/uniprotkb/Q9SW42-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MSFFGKLADTVVSFANDSAKSVVEEVVNPTVSFANNSARTVVEEVVNPTVSFANDSARTVVEKVLNPTVSFIDSQLQRPRDVLVQQQILDNLQESNGSNFPGDDYHSPDRKNWMAHLSVDKLTLNKIVWPGTHDSATNGIGDPLVTRWLGECQTLSIFDQLVLGTRVLDIRFQEDRCVCHGALSSYNVDVVLNDVIRFVSETQSEIIILEIRTEFGKKDPFEFETYLVDKLGQFLIHQDDNLFNKPVSEILPKRVICIWKPRESPKPSRGGILWNSDYLKDNWIDTDLPWTKFQSNLKHLSEQQPISSRKFFYRVENTVTPQADNPVVWVKQVTDRIRKHARLFISQCASKGYGDKLQILSTDFIEGDFVDACVGLTHARMKGQFDKISPS", "length": 391, "header": "tr|Q9SW42-1|Q9SW42_ARATH Isoform 1 of PLC-like phosphodiesterases superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SW42-1" }, "isoforms": [ { "isoform_ac": "Q9SW42-1", "url": "https://www.uniprot.org/uniprotkb/Q9SW42/entry", "sequence": { "sequence": "MSFFGKLADTVVSFANDSAKSVVEEVVNPTVSFANNSARTVVEEVVNPTVSFANDSARTVVEKVLNPTVSFIDSQLQRPRDVLVQQQILDNLQESNGSNFPGDDYHSPDRKNWMAHLSVDKLTLNKIVWPGTHDSATNGIGDPLVTRWLGECQTLSIFDQLVLGTRVLDIRFQEDRCVCHGALSSYNVDVVLNDVIRFVSETQSEIIILEIRTEFGKKDPFEFETYLVDKLGQFLIHQDDNLFNKPVSEILPKRVICIWKPRESPKPSRGGILWNSDYLKDNWIDTDLPWTKFQSNLKHLSEQQPISSRKFFYRVENTVTPQADNPVVWVKQVTDRIRKHARLFISQCASKGYGDKLQILSTDFIEGDFVDACVGLTHARMKGQFDKISPS", "length": 391, "header": "tr|Q9SW42-1|Q9SW42_ARATH Isoform 1 of PLC-like phosphodiesterases superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SW42-1" }, "locus": { "chromosome": "4", "start_pos": 16637322, "end_pos": 16638962, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT4G34930.1", "url": "https://www.ensemblgenomes.org/id/AT4G34930.1" }, { "database": "Ensembl Peptide", "id": "AT4G34930.1", "url": "https://www.ensemblgenomes.org/id/AT4G34930.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "1999", "authors": "Mayer K, Sch\u00fcller C, Wambutt R, Murphy G, Volckaert G, Pohl T, D\u00fcsterh\u00f6ft A, Stiekema W, Entian K D, Terryn N, Harris B, Ansorge W, Brandt P, Grivell L, Rieger M, Weichselgartner M, de Simone V, Obermaier B, Mache R, M\u00fcller M, Kreis M, Delseny M, Puigdomenech P, Watson M, Schmidtheini T, Reichert B, Portatelle D, Perez-Alonso M, Boutry M, Bancroft I, Vos P, Hoheisel J, Zimmermann W, Wedler H, Ridley P, Langham S A, McCullagh B, Bilham L, Robben J, Van der Schueren J, Grymonprez B, Chuang Y J, Vandenbussche F, Braeken M, Weltjens I, Voet M, Bastiaens I, Aert R, Defoor E, Weitzenegger T, Bothe G, Ramsperger U, Hilbert H, Braun M, Holzer E, Brandt A, Peters S, van Staveren M, Dirske W, Mooijman P, Klein Lankhorst R, Rose M, Hauf J, K\u00f6tter P, Berneiser S, Hempel S, Feldpausch M, Lamberth S, Van den Daele H, De Keyser A, Buysshaert C, Gielen J, Villarroel R, De Clercq R, Van Montagu M, Rogers J, Cronin A, Quail M, Bray-Allen S, Clark L, Doggett J, Hall S, Kay M, Lennard N, McLay K, Mayes R, Pettett A, Rajandream M A, Lyne M, Benes V, Rechmann S, Borkova D, Bl\u00f6cker H, Scharfe M, Grimm M, L\u00f6hnert T H, Dose S, de Haan M, Maarse A, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Fartmann B, Granderath K, Dauner D, Herzl A, Neumann S, Argiriou A, Vitale D, Liguori R, Piravandi E, Massenet O, Quigley F, Clabauld G, M\u00fcndlein A, Felber R, Schnabl S, Hiller R, Schmidt W, Lecharny A, Aubourg S, Chefdor F, Cooke R, Berger C, Montfort A, Casacuberta E, Gibbons T, Weber N, Vandenbol M, Bargues M, Terol J, Torres A, Perez-Perez A, Purnelle B, Bent E, Johnson S, Tacon D, Jesse T, Heijnen L, Schwarz S, Scholler P, Heber S, Francs P, Bielke C, Frishman D, Haase D, Lemcke K, Mewes H W, Stocker S, Zaccaria P, Bevan M, Wilson R K, de la Bastide M, Habermann K, Parnell L, Dedhia N, Gnoj L, Schutz K, Huang E, Spiegel L, Sehkon M, Murray J, Sheet P, Cordes M, Abu-Threideh J, Stoneking T, Kalicki J, Graves T, Harmon G, Edwards J, Latreille P, Courtney L, Cloud J, Abbott A, Scott K, Johnson D, Minx P, Bentley D, Fulton B, Miller N, Greco T, Kemp K, Kramer J, Fulton L, Mardis E, Dante M, Pepin K, Hillier L, Nelson J, Spieth J, Ryan E, Andrews S, Geisel C, Layman D, Du H, Ali J, Berghoff A, Jones K, Drone K, Cotton M, Joshu C, Antonoiu B, Zidanic M, Strong C, Sun H, Lamar B, Yordan C, Ma P, Zhong J, Preston R, Vil D, Shekher M, Matero A, Shah R, Swaby I K, O'Shaughnessy A, Rodriguez M, Hoffmann J, Till S, Granat S, Shohdy N, Hasegawa A, Hameed A, Lodhi M, Johnson A, Chen E, Marra M, Martienssen R, McCombie W R", "evidence": [ { "database": "UniProtKB", "id": "Q9SW42", "url": "https://www.uniprot.org/uniprotkb/Q9SW42" } ], "reference": [ { "type": "PubMed", "id": "10617198", "url": "https://glygen.org/publication/PubMed/10617198" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9SW42", "url": "https://www.uniprot.org/uniprotkb/Q9SW42" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT4G34930", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT4G34930", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "extracellular region", "id": "GO:0005576", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005576", "evidence": [ { "database": "UniProtKB", "id": "Q9SW42", "url": "https://www.uniprot.org/uniprotkb/Q9SW42" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, 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"total", "count": 2 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "Q9SW43-1", "uniprot_ac": "Q9SW43", "uniprot_id": "Q9SW43_ARATH", "mass": { "chemical_mass": 36400.0, "monoisotopic_mass": 36400.0 }, "refseq": { "ac": "NP_195218", "name": "PLC-like phosphodiesterases superfamily protein", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_195218" }, "gene_names": [ { "name": "F11I11.160", "type": "synonym", "evidence": [ { "id": "NP_195218", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_195218" }, { "id": "Q9SW43", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SW43" } ] }, { "name": "F11I11_160", "type": "synonym", "evidence": [ { "id": "NP_195218", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_195218" }, { "id": "Q9SW43", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SW43" } ] } ], "protein_names": [ { "name": "PLC-like phosphodiesterases superfamily protein", "type": "synonym", "evidence": [ { "id": "NP_195218", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_195218" }, { "id": "Q9SW43", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SW43/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9SW43", "url": "https://www.uniprot.org/uniprotkb/Q9SW43" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9SW43", "locus": {} } ], "crossref": [ { "id": "829644", "url": "https://www.ncbi.nlm.nih.gov/gene/829644", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "Q9SW43", "url": "https://www.ebi.ac.uk/intact/interactors/id:Q9SW43*", "database": "IntAct", "categories": [ "Other" ] }, { "id": "IPR000909", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000909", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR017946", "url": "https://www.ebi.ac.uk/interpro/entry/IPR017946", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR051057", "url": "https://www.ebi.ac.uk/interpro/entry/IPR051057", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT4G34920", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT4G34920", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "EDRQICH", "url": "https://omabrowser.org/oma/group/EDRQICH/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR13593", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR13593", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR13593:SF106", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR13593:SF106", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00388", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00388", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_195218", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_195218", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT4G34920", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT4G34920", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9SW43", "url": "https://www.uniprot.org/uniprotkb/Q9SW43", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9SW43-1", "url": "https://www.uniprot.org/uniprotkb/Q9SW43-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": 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family protein OS=Arabidopsis thaliana OX=3702 GN= PE=3 SV=1 CANONICAL=Q9SW62-1" }, "locus": { "chromosome": "4", "start_pos": 5347396, "end_pos": 5350436, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT4G08430.1", "url": "https://www.ensemblgenomes.org/id/AT4G08430.1" }, { "database": "Ensembl Peptide", "id": "AT4G08430.1", "url": "https://www.ensemblgenomes.org/id/AT4G08430.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "1999", "authors": "Mayer K, Sch\u00fcller C, Wambutt R, Murphy G, Volckaert G, Pohl T, D\u00fcsterh\u00f6ft A, Stiekema W, Entian K D, Terryn N, Harris B, Ansorge W, Brandt P, Grivell L, Rieger M, Weichselgartner M, de Simone V, Obermaier B, Mache R, M\u00fcller M, Kreis M, Delseny M, Puigdomenech P, Watson M, Schmidtheini T, Reichert B, Portatelle D, Perez-Alonso M, 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F, Clabauld G, M\u00fcndlein A, Felber R, Schnabl S, Hiller R, Schmidt W, Lecharny A, Aubourg S, Chefdor F, Cooke R, Berger C, Montfort A, Casacuberta E, Gibbons T, Weber N, Vandenbol M, Bargues M, Terol J, Torres A, Perez-Perez A, Purnelle B, Bent E, Johnson S, Tacon D, Jesse T, Heijnen L, Schwarz S, Scholler P, Heber S, Francs P, Bielke C, Frishman D, Haase D, Lemcke K, Mewes H W, Stocker S, Zaccaria P, Bevan M, Wilson R K, de la Bastide M, Habermann K, Parnell L, Dedhia N, Gnoj L, Schutz K, Huang E, Spiegel L, Sehkon M, Murray J, Sheet P, Cordes M, Abu-Threideh J, Stoneking T, Kalicki J, Graves T, Harmon G, Edwards J, Latreille P, Courtney L, Cloud J, Abbott A, Scott K, Johnson D, Minx P, Bentley D, Fulton B, Miller N, Greco T, Kemp K, Kramer J, Fulton L, Mardis E, Dante M, Pepin K, Hillier L, Nelson J, Spieth J, Ryan E, Andrews S, Geisel C, Layman D, Du H, Ali J, Berghoff A, Jones K, Drone K, Cotton M, Joshu C, Antonoiu B, Zidanic M, Strong C, Sun H, Lamar B, Yordan C, Ma P, Zhong 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"database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR47983:SF24", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR47983:SF24", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF07714", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF07714", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_175256", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_175256", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "17989", "url": "https://www.rhea-db.org/rhea/17989", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "46608", "url": "https://www.rhea-db.org/rhea/46608", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "AT1G48220", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT1G48220", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9SX57", "url": 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I, Kurtz D B, Kwan A, Lam B, Langin-Hooper S, Lee A, Lee J M, Lenz C A, Li J H, Li Y, Lin X, Liu S X, Liu Z A, Luros J S, Maiti R, Marziali A, Militscher J, Miranda M, Nguyen M, Nierman W C, Osborne B I, Pai G, Peterson J, Pham P K, Rizzo M, Rooney T, Rowley D, Sakano H, Salzberg S L, Schwartz J R, Shinn P, Southwick A M, Sun H, Tallon L J, Tambunga G, Toriumi M J, Town C D, Utterback T, Van Aken S, Vaysberg M, Vysotskaia V S, Walker M, Wu D, Yu G, Fraser C M, Venter J C, Davis R W", "evidence": [ { "database": "UniProtKB", "id": "Q9SX57", "url": "https://www.uniprot.org/uniprotkb/Q9SX57" } ], "reference": [ { "type": "PubMed", "id": "11130712", "url": "https://glygen.org/publication/PubMed/11130712" } ] }, { "title": "Simultaneous high-throughput recombinational cloning of open reading frames in closed and open configurations.", "journal": "Plant Biotechnol. J.", "date": "2006", "authors": "Underwood Beverly A, Vanderhaeghen Rudy, Whitford Ryan, Town Christopher D, Hilson Pierre", "evidence": [ { "database": "UniProtKB", "id": "Q9SX57", "url": "https://www.uniprot.org/uniprotkb/Q9SX57" } ], "reference": [ { "type": "PubMed", "id": "17147637", "url": "https://glygen.org/publication/PubMed/17147637" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9SX57", "url": "https://www.uniprot.org/uniprotkb/Q9SX57" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] }, { "title": "Monomerization of abscisic acid receptors through CARKs-mediated phosphorylation.", "journal": "New Phytol.", "date": "2022", "authors": "Li Xiaoyi, Xie Yiting, Zhang Qian, Hua Xinyue, Peng Lu, Li Kexuan, Yu Qin, Chen Yihong, Yao Huan, He Juan, Huang Yaling, Wang Ruolin, Wang Tao, Wang Jianmei, Li Xufeng, Yang Yi", "evidence": [ { "database": "UniProtKB", "id": "Q9SX57", "url": "https://www.uniprot.org/uniprotkb/Q9SX57" } ], "reference": [ { "type": "PubMed", "id": "35388459", "url": "https://glygen.org/publication/PubMed/35388459" } ] } ], "pathway": [ { "id": "ath:AT1G48220", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT1G48220", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 3, "go_terms": [ { "name": "protein serine/threonine kinase activity", "id": "GO:0004674", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004674", "evidence": [ { "database": "UniProtKB", "id": "Q9SX57", "url": "https://www.uniprot.org/uniprotkb/Q9SX57" } ], "pmid": "" }, { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "Q9SX57", "url": "https://www.uniprot.org/uniprotkb/Q9SX57" } ], "pmid": "" }, { "name": "metal ion binding", "id": "GO:0046872", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046872", "evidence": [ { "database": "UniProtKB", "id": "Q9SX57", "url": "https://www.uniprot.org/uniprotkb/Q9SX57" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q9SX57", "url": "https://www.uniprot.org/uniprotkb/Q9SX57" } ], "pmid": "" }, { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "Q9SX57", "url": "https://www.uniprot.org/uniprotkb/Q9SX57" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 350, "end_pos": 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"evidence": [ { "id": "C0LGH8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGH8" } ] } ] }, { "uniprot_ac": "C0LGI2", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "C0LGI2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGI2" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "C0LGI2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGI2" } ] } ] }, { "uniprot_ac": "C0LGI5", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "C0LGI5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGI5" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "C0LGI5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGI5" } ] } ] }, { "uniprot_ac": "C0LGJ1", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "C0LGJ1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGJ1" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "C0LGJ1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGJ1" } ] } ] }, { "uniprot_ac": "C0LGJ9", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "C0LGJ9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGJ9" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "C0LGJ9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGJ9" } ] } ] }, { "uniprot_ac": "C0LGK4", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "C0LGK4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGK4" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "C0LGK4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGK4" } ] } ] }, { "uniprot_ac": "C0LGK9", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "C0LGK9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGK9" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "C0LGK9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGK9" } ] } ] }, { "uniprot_ac": "C0LGL4", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "C0LGL4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGL4" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "C0LGL4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGL4" } ] } ] }, { "uniprot_ac": "C0LGL9", "gene_name": "FEI2", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "C0LGL9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGL9" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "C0LGL9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGL9" } ] } ] }, { "uniprot_ac": "C0LGN2", "gene_name": "LRR-RLK", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "C0LGN2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGN2" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "C0LGN2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGN2" } ] } ] }, { "uniprot_ac": "C0LGP2", "gene_name": "MEE39", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "C0LGP2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGP2" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "C0LGP2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGP2" } ] } ] }, { "uniprot_ac": "C0LGP4", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "C0LGP4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGP4" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "C0LGP4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGP4" } ] } ] }, { "uniprot_ac": "C0LGP9", "gene_name": "IMK3", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "C0LGP9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGP9" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "C0LGP9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGP9" } ] } ] }, { "uniprot_ac": "C0LGQ4", "gene_name": "MDIS2", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "C0LGQ4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGQ4" } ] } ] }, { "uniprot_ac": "C0LGQ5", "gene_name": "GSO1", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "C0LGQ5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGQ5" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "C0LGQ5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGQ5" } ] } ] }, { "uniprot_ac": "C0LGQ7", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "C0LGQ7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGQ7" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "C0LGQ7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGQ7" } ] } ] }, { "uniprot_ac": "C0LGQ9", "gene_name": "GHR1", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "C0LGQ9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGQ9" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "C0LGQ9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGQ9" } ] } ] }, { "uniprot_ac": "C0LGR3", "gene_name": "RGI3", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "C0LGR3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGR3" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "C0LGR3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGR3" } ] } ] }, { "uniprot_ac": "C0LGR6", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "C0LGR6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGR6" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "C0LGR6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGR6" } ] } ] }, { "uniprot_ac": "C0LGR9", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "C0LGR9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGR9" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "C0LGR9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGR9" } ] } ] }, { "uniprot_ac": "C0LGS2", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "C0LGS2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGS2" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "C0LGS2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGS2" } ] } ] }, { "uniprot_ac": "C0LGS3", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "C0LGS3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGS3" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "C0LGS3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGS3" } ] } ] }, { "uniprot_ac": "C0LGT1", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "C0LGT1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGT1" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "C0LGT1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGT1" } ] } ] }, { "uniprot_ac": "C0LGT5", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "C0LGT5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGT5" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "C0LGT5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGT5" } ] } ] }, { "uniprot_ac": "C0LGT6", "gene_name": "EFR", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "C0LGT6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGT6" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "C0LGT6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGT6" } ] } ] }, { "uniprot_ac": "C0LGU0", "gene_name": "PRK1", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "C0LGU0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGU0" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "C0LGU0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGU0" } ] } ] }, { "uniprot_ac": "C0LGU1", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "C0LGU1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGU1" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "C0LGU1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGU1" } ] } ] }, { "uniprot_ac": "C0LGU5", "gene_name": "CIK4", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "C0LGU5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGU5" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "C0LGU5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGU5" } ] } ] }, { "uniprot_ac": "C0LGU7", "gene_name": "MDIS1", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "C0LGU7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGU7" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "C0LGU7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGU7" } ] } ] }, { "uniprot_ac": "C0LGV0", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "C0LGV0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGV0" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "C0LGV0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGV0" } ] } ] }, { "uniprot_ac": "C0LGV1", "gene_name": "RGI2", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "C0LGV1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGV1" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "C0LGV1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGV1" } ] } ] }, { "uniprot_ac": "C0LGW2", "gene_name": "PAM74", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "C0LGW2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGW2" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "C0LGW2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGW2" } ] } ] }, { "uniprot_ac": "C0LGW6", "gene_name": "ERL1", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "C0LGW6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGW6" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "C0LGW6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGW6" } ] } ] }, { "uniprot_ac": "C0LGX1", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "C0LGX1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGX1" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "C0LGX1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGX1" } ] } ] }, { "uniprot_ac": "C0LGX3", "gene_name": "HSL2", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "C0LGX3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGX3" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "C0LGX3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/C0LGX3" } ] } ] }, { "uniprot_ac": "D7SFH9", "gene_name": "LRK10L-2.6", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "D7SFH9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/D7SFH9" } ] }, { "ec_number": "3.1.4.46", "activity": "sn-glycero-3-phospho-(1'-rac-glycerol) + H2O = sn-glycerol 3-phosphate + glycerol + H(+).", "evidence": [ { "id": "D7SFH9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/D7SFH9" } ] }, { "ec_number": "3.1.4.46", "activity": "", "evidence": [ { "id": "D7SFH9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/D7SFH9" } ] } ] }, { "uniprot_ac": "F4HPN2", "gene_name": "IRE4", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "F4HPN2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4HPN2" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "F4HPN2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4HPN2" } ] } ] }, { "uniprot_ac": "F4HPR9", "gene_name": "ATMAP4K", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "F4HPR9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4HPR9" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "F4HPR9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4HPR9" } ] } ] }, { "uniprot_ac": "F4HQ17", "gene_name": "LRK10L-1.4", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "F4HQ17", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4HQ17" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "F4HQ17", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4HQ17" } ] } ] }, { "uniprot_ac": "F4HQ20", "gene_name": "LRK10L-2.5", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "F4HQ20", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4HQ20" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "F4HQ20", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4HQ20" } ] } ] }, { "uniprot_ac": "F4HQ22", "gene_name": "LRK10L-2.4", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "F4HQ22", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4HQ22" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "F4HQ22", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4HQ22" } ] } ] }, { "uniprot_ac": "F4HQ23", "gene_name": "LRK10L-2.7", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "F4HQ23", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4HQ23" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "F4HQ23", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4HQ23" } ] } ] }, { "uniprot_ac": "F4HQ34", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "F4HQ34", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4HQ34" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "F4HQ34", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4HQ34" } ] } ] }, { "uniprot_ac": "F4HRJ4", "gene_name": "MAPKKK3", "activity": [ { "ec_number": "2.7.11.25", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "F4HRJ4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4HRJ4" } ] }, { "ec_number": "2.7.11.25", "activity": "", "evidence": [ { "id": "F4HRJ4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4HRJ4" } ] } ] }, { "uniprot_ac": "F4HU55", "gene_name": "BSK4", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "F4HU55", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4HU55" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "F4HU55", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4HU55" } ] } ] }, { "uniprot_ac": "F4HVB3", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "F4HVB3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4HVB3" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "F4HVB3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4HVB3" } ] } ] }, { "uniprot_ac": "F4HVH9", "gene_name": "RAF11", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "F4HVH9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4HVH9" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "F4HVH9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4HVH9" } ] } ] }, { "uniprot_ac": "F4HWU0", "gene_name": "CARK11", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "F4HWU0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4HWU0" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "F4HWU0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4HWU0" } ] } ] }, { "uniprot_ac": "F4HX16", "gene_name": "PBL41", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "F4HX16", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4HX16" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "F4HX16", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4HX16" } ] } ] }, { "uniprot_ac": "F4HXP9", "gene_name": "XI-C", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "F4HXP9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4HXP9" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "F4HXP9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4HXP9" } ] } ] }, { "uniprot_ac": "F4HYG2", "gene_name": "IRE3", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "F4HYG2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4HYG2" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "F4HYG2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4HYG2" } ] } ] }, { "uniprot_ac": "F4I065", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "F4I065", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4I065" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "F4I065", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4I065" } ] } ] }, { "uniprot_ac": "F4I0Z0", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "F4I0Z0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4I0Z0" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "F4I0Z0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4I0Z0" } ] } ] }, { "uniprot_ac": "F4I2K0", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "F4I2K0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4I2K0" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "F4I2K0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4I2K0" } ] } ] }, { "uniprot_ac": "F4I2N7", "gene_name": "RLK7", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "F4I2N7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4I2N7" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "F4I2N7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4I2N7" } ] } ] }, { "uniprot_ac": "F4I3K4", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "F4I3K4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4I3K4" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "F4I3K4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4I3K4" } ] } ] }, { "uniprot_ac": "F4I3M3", "gene_name": "BSK7", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "F4I3M3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4I3M3" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "F4I3M3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4I3M3" } ] } ] }, { "uniprot_ac": "F4I3V3", "gene_name": "LRK10L-1.5", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "F4I3V3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4I3V3" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "F4I3V3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4I3V3" } ] } ] }, { "uniprot_ac": "F4I4F2", "gene_name": "RHS3", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "F4I4F2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4I4F2" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "F4I4F2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4I4F2" } ] } ] }, { "uniprot_ac": "F4I6E4", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "F4I6E4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4I6E4" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "F4I6E4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4I6E4" } ] } ] }, { "uniprot_ac": "F4I7Y4", "gene_name": "BSK11", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "F4I7Y4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4I7Y4" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "F4I7Y4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4I7Y4" } ] } ] }, { "uniprot_ac": "F4IAN2", "gene_name": "M3KDELTA7", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "F4IAN2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4IAN2" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "F4IAN2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4IAN2" } ] } ] }, { "uniprot_ac": "F4IB60", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "F4IB60", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4IB60" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "F4IB60", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4IB60" } ] } ] }, { "uniprot_ac": "F4IB76", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "F4IB76", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4IB76" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "F4IB76", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4IB76" } ] } ] }, { "uniprot_ac": "F4IP61", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "F4IP61", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4IP61" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "F4IP61", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4IP61" } ] } ] }, { "uniprot_ac": "F4IPV6", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "F4IPV6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4IPV6" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "F4IPV6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4IPV6" } ] } ] }, { "uniprot_ac": "F4IS56", "gene_name": "ILK1", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "F4IS56", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4IS56" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "F4IS56", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4IS56" } ] } ] }, { "uniprot_ac": "F4IV25", "gene_name": "PAX", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "F4IV25", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4IV25" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "F4IV25", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4IV25" } ] } ] }, { "uniprot_ac": "F4IVI0", "gene_name": "BUB1", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "F4IVI0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4IVI0" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "F4IVI0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4IVI0" } ] } ] }, { "uniprot_ac": "F4J0D2", "gene_name": "PBL36", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "F4J0D2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4J0D2" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "F4J0D2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4J0D2" } ] } ] }, { "uniprot_ac": "F4J3A9", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "F4J3A9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4J3A9" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "F4J3A9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4J3A9" } ] } ] }, { "uniprot_ac": "F4J3H7", "gene_name": "ZRK7", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "F4J3H7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4J3H7" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "F4J3H7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4J3H7" } ] } ] }, { "uniprot_ac": "F4J551", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "F4J551", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4J551" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "F4J551", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4J551" } ] } ] }, { "uniprot_ac": "F4J6F6", "gene_name": "IREH1", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "F4J6F6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4J6F6" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "F4J6F6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4J6F6" } ] } ] }, { "uniprot_ac": "F4J927", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "F4J927", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4J927" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "F4J927", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4J927" } ] } ] }, { "uniprot_ac": "F4J982", "gene_name": "SRPK4", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "F4J982", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4J982" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "F4J982", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4J982" } ] } ] }, { "uniprot_ac": "F4J9G8", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "F4J9G8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4J9G8" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "F4J9G8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4J9G8" } ] } ] }, { "uniprot_ac": "F4JC18", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "F4JC18", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4JC18" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "F4JC18", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4JC18" } ] } ] }, { "uniprot_ac": "F4JDN8", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "F4JDN8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4JDN8" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "F4JDN8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4JDN8" } ] } ] }, { "uniprot_ac": "F4JEQ2", "gene_name": "PBL23", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "F4JEQ2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4JEQ2" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "F4JEQ2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4JEQ2" } ] } ] }, { "uniprot_ac": "F4JI10", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "F4JI10", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4JI10" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "F4JI10", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4JI10" } ] } ] }, { "uniprot_ac": "F4JN22", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "F4JN22", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4JN22" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "F4JN22", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4JN22" } ] } ] }, { "uniprot_ac": "F4JPT1", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "F4JPT1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4JPT1" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "F4JPT1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4JPT1" } ] } ] }, { "uniprot_ac": "F4JPX3", "gene_name": "PBL20", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "F4JPX3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4JPX3" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "F4JPX3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4JPX3" } ] } ] }, { "uniprot_ac": "F4JQX7", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "F4JQX7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4JQX7" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "F4JQX7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4JQX7" } ] } ] }, { "uniprot_ac": "F4JSF8", "gene_name": "", "activity": [ { "ec_number": "2.7.11.22", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "F4JSF8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4JSF8" } ] }, { "ec_number": "2.7.11.22", "activity": "", "evidence": [ { "id": "F4JSF8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4JSF8" } ] } ] }, { "uniprot_ac": "F4JTP5", "gene_name": "STY46", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "F4JTP5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4JTP5" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "F4JTP5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4JTP5" } ] } ] }, { "uniprot_ac": "F4JVS7", "gene_name": "MAPKKK16", "activity": [ { "ec_number": "2.7.11.25", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "F4JVS7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4JVS7" } ] }, { "ec_number": "2.7.11.25", "activity": "", "evidence": [ { "id": "F4JVS7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4JVS7" } ] } ] }, { "uniprot_ac": "F4JY37", "gene_name": "RUK", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "F4JY37", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4JY37" } ] } ] }, { "uniprot_ac": "F4JZW1", "gene_name": "PBL13", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "F4JZW1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4JZW1" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "F4JZW1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4JZW1" } ] } ] }, { "uniprot_ac": "F4K645", "gene_name": "RAF10", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "F4K645", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4K645" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "F4K645", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4K645" } ] } ] }, { "uniprot_ac": "F4K6B8", "gene_name": "RGI4", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "F4K6B8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4K6B8" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "F4K6B8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4K6B8" } ] } ] }, { "uniprot_ac": "F4KA50", "gene_name": "LRK10L-2.2", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "F4KA50", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4KA50" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "F4KA50", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4KA50" } ] } ] }, { "uniprot_ac": "F4KA51", "gene_name": "LRK10L-2.3", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "F4KA51", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4KA51" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "F4KA51", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4KA51" } ] } ] }, { "uniprot_ac": "F4KEF0", "gene_name": "MUL8.7", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "F4KEF0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4KEF0" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "F4KEF0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4KEF0" } ] } ] }, { "uniprot_ac": "F4KFD4", "gene_name": "MYH9.10", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "F4KFD4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4KFD4" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "F4KFD4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4KFD4" } ] } ] }, { "uniprot_ac": "F4KI00", "gene_name": "ATRLCK", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "F4KI00", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4KI00" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "F4KI00", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F4KI00" } ] } ] }, { "uniprot_ac": "O04086", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O04086", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O04086" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O04086", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O04086" } ] } ] }, { "uniprot_ac": "O04533", "gene_name": "LECRK52", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O04533", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O04533" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O04533", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O04533" } ] } ] }, { "uniprot_ac": "O04534", "gene_name": "LECRK51", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O04534", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O04534" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O04534", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O04534" } ] } ] }, { "uniprot_ac": "O22040", "gene_name": "ANP1", "activity": [ { "ec_number": "2.7.11.25", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O22040", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O22040" } ] }, { "ec_number": "2.7.11.25", "activity": "", "evidence": [ { "id": "O22040", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O22040" } ] } ] }, { "uniprot_ac": "O22042", "gene_name": "ANP3", "activity": [ { "ec_number": "2.7.11.25", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O22042", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O22042" } ] }, { "ec_number": "2.7.11.25", "activity": "", "evidence": [ { "id": "O22042", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O22042" } ] } ] }, { "uniprot_ac": "O22178", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O22178", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O22178" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O22178", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O22178" } ] } ] }, { "uniprot_ac": "O22476", "gene_name": "BRI1", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O22476", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O22476" } ] }, { "ec_number": "2.7.10.1", "activity": "L-tyrosyl-[protein] + ATP = O-phospho-L-tyrosyl-[protein] + ADP + H(+).", "evidence": [ { "id": "O22476", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O22476" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O22476", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O22476" } ] }, { "ec_number": "2.7.10.1", "activity": "", "evidence": [ { "id": "O22476", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O22476" } ] } ] }, { "uniprot_ac": "O22558", "gene_name": "STY8", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O22558", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O22558" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O22558", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O22558" } ] } ] }, { "uniprot_ac": "O22764", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O22764", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O22764" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O22764", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O22764" } ] } ] }, { "uniprot_ac": "O22833", "gene_name": "LECRK54", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O22833", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O22833" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O22833", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O22833" } ] } ] }, { "uniprot_ac": "O22834", "gene_name": "LECRK53", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O22834", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O22834" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O22834", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O22834" } ] } ] }, { "uniprot_ac": "O22932", "gene_name": "CIPK11", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O22932", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O22932" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O22932", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O22932" } ] } ] }, { "uniprot_ac": "O22971", "gene_name": "CIPK13", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O22971", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O22971" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O22971", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O22971" } ] } ] }, { "uniprot_ac": "O23081", "gene_name": "CRK41", "activity": [ { "ec_number": "2.7.11.-", "activity": "", "evidence": [ { "id": "O23081", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O23081" } ] } ] }, { "uniprot_ac": "O23082", "gene_name": "CRK44", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O23082", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O23082" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O23082", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O23082" } ] } ] }, { "uniprot_ac": "O23145", "gene_name": "ASK2", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O23145", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O23145" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O23145", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O23145" } ] } ] }, { "uniprot_ac": "O23236", "gene_name": "MPK14", "activity": [ { "ec_number": "2.7.11.24", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O23236", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O23236" } ] }, { "ec_number": "2.7.11.24", "activity": "", "evidence": [ { "id": "O23236", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O23236" } ] } ] }, { "uniprot_ac": "O23304", "gene_name": "BLUS1", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O23304", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O23304" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O23304", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O23304" } ] } ] }, { "uniprot_ac": "O23334", "gene_name": "DL3430W", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O23334", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O23334" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O23334", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O23334" } ] } ] }, { "uniprot_ac": "O24527", "gene_name": "SIK1", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O24527", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O24527" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O24527", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O24527" } ] } ] }, { "uniprot_ac": "O48814", "gene_name": "BIK1", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O48814", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O48814" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O48814", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O48814" } ] } ] }, { "uniprot_ac": "O48837", "gene_name": "LECRKS2", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O48837", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O48837" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O48837", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O48837" } ] } ] }, { "uniprot_ac": "O48963", "gene_name": "PHOT1", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O48963", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O48963" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O48963", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O48963" } ] } ] }, { "uniprot_ac": "O49318", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O49318", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O49318" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O49318", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O49318" } ] } ] }, { "uniprot_ac": "O49338", "gene_name": "CARK9", "activity": [ { "ec_number": "2.7.10.-", "activity": "", "evidence": [ { "id": "O49338", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O49338" } ] } ] }, { "uniprot_ac": "O49445", "gene_name": "LECRK72", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O49445", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O49445" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O49445", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O49445" } ] } ] }, { "uniprot_ac": "O49545", "gene_name": "BAM1", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O49545", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O49545" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O49545", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O49545" } ] } ] }, { "uniprot_ac": "O49564", "gene_name": "CRK27", "activity": [ { "ec_number": "2.7.11.-", "activity": "", "evidence": [ { "id": "O49564", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O49564" } ] } ] }, { "uniprot_ac": "O49717", "gene_name": "CPK15", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O49717", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O49717" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O49717", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O49717" } ] } ] }, { "uniprot_ac": "O49839", "gene_name": "PBL2", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O49839", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O49839" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O49839", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O49839" } ] } ] }, { "uniprot_ac": "O49840", "gene_name": "PBL3", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O49840", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O49840" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O49840", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O49840" } ] } ] }, { "uniprot_ac": "O64477", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O64477", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O64477" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O64477", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O64477" } ] } ] }, { "uniprot_ac": "O64556", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O64556", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O64556" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O64556", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O64556" } ] } ] }, { "uniprot_ac": "O64573", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O64573", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O64573" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O64573", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O64573" } ] } ] }, { "uniprot_ac": "O64629", "gene_name": "AUR3", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O64629", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O64629" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O64629", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O64629" } ] } ] }, { "uniprot_ac": "O64639", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O64639", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O64639" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O64639", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O64639" } ] } ] }, { "uniprot_ac": "O64682", "gene_name": "PID", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O64682", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O64682" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O64682", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O64682" } ] } ] }, { "uniprot_ac": "O64768", "gene_name": "RAF24", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O64768", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O64768" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O64768", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O64768" } ] } ] }, { "uniprot_ac": "O64770", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O64770", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O64770" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O64770", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O64770" } ] } ] }, { "uniprot_ac": "O64771", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O64771", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O64771" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O64771", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O64771" } ] } ] }, { "uniprot_ac": "O64774", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O64774", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O64774" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O64774", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O64774" } ] } ] }, { "uniprot_ac": "O64776", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O64776", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O64776" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O64776", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O64776" } ] } ] }, { "uniprot_ac": "O64777", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O64777", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O64777" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O64777", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O64777" } ] } ] }, { "uniprot_ac": "O64778", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O64778", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O64778" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O64778", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O64778" } ] } ] }, { "uniprot_ac": "O64780", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O64780", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O64780" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O64780", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O64780" } ] } ] }, { "uniprot_ac": "O64781", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O64781", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O64781" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O64781", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O64781" } ] } ] }, { "uniprot_ac": "O64782", "gene_name": "SD129", "activity": [ { "ec_number": "2.7.12.1", "activity": "L-tyrosyl-[protein] + ATP = O-phospho-L-tyrosyl-[protein] + ADP + H(+).", "evidence": [ { "id": "O64782", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O64782" } ] }, { "ec_number": "2.7.12.1", "activity": "", "evidence": [ { "id": "O64782", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O64782" } ] } ] }, { "uniprot_ac": "O64783", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O64783", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O64783" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O64783", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O64783" } ] } ] }, { "uniprot_ac": "O64784", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O64784", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O64784" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O64784", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O64784" } ] } ] }, { "uniprot_ac": "O64793", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O64793", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O64793" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O64793", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O64793" } ] } ] }, { "uniprot_ac": "O64794", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O64794", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O64794" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O64794", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O64794" } ] } ] }, { "uniprot_ac": "O64812", "gene_name": "SRK2J", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O64812", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O64812" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O64812", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O64812" } ] } ] }, { "uniprot_ac": "O64816", "gene_name": "CKA4", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O64816", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O64816" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O64816", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O64816" } ] } ] }, { "uniprot_ac": "O64817", "gene_name": "CKA3", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O64817", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O64817" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O64817", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O64817" } ] } ] }, { "uniprot_ac": "O64825", "gene_name": "LYK4", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O64825", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O64825" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O64825", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O64825" } ] } ] }, { "uniprot_ac": "O64842", "gene_name": "PBL12", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O64842", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O64842" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O64842", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O64842" } ] } ] }, { "uniprot_ac": "O65238", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O65238", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O65238" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O65238", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O65238" } ] } ] }, { "uniprot_ac": "O65405", "gene_name": "CRK28", "activity": [ { "ec_number": "2.7.11.-", "activity": "", "evidence": [ { "id": "O65405", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O65405" } ] }, { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O65405", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O65405" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O65405", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O65405" } ] } ] }, { "uniprot_ac": "O65440", "gene_name": "BAM3", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O65440", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O65440" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O65440", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O65440" } ] } ] }, { "uniprot_ac": "O65468", "gene_name": "CRK8", "activity": [ { "ec_number": "2.7.11.-", "activity": "", "evidence": [ { "id": "O65468", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O65468" } ] } ] }, { "uniprot_ac": "O65472", "gene_name": "CRK12", "activity": [ { "ec_number": "2.7.11.-", "activity": "", "evidence": [ { "id": "O65472", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O65472" } ] } ] }, { "uniprot_ac": "O65476", "gene_name": "CRK16", "activity": [ { "ec_number": "2.7.11.-", "activity": "", "evidence": [ { "id": "O65476", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O65476" } ] } ] }, { "uniprot_ac": "O65479", "gene_name": "CRK20", "activity": [ { "ec_number": "2.7.11.-", "activity": "", "evidence": [ { "id": "O65479", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O65479" } ] } ] }, { "uniprot_ac": "O65482", "gene_name": "CRK23", "activity": [ { "ec_number": "2.7.11.-", "activity": "", "evidence": [ { "id": "O65482", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O65482" } ] } ] }, { "uniprot_ac": "O65483", "gene_name": "CRK24", "activity": [ { "ec_number": "2.7.11.-", "activity": "", "evidence": [ { "id": "O65483", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O65483" } ] } ] }, { "uniprot_ac": "O65530", "gene_name": "PERK14", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O65530", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O65530" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O65530", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O65530" } ] } ] }, { "uniprot_ac": "O65554", "gene_name": "CIPK6", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O65554", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O65554" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O65554", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O65554" } ] } ] }, { "uniprot_ac": "O65924", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O65924", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O65924" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O65924", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O65924" } ] } ] }, { "uniprot_ac": "O80345", "gene_name": "CDKF-1", "activity": [ { "ec_number": "2.7.11.22", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O80345", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O80345" } ] }, { "ec_number": "2.7.11.23", "activity": "[DNA-directed RNA polymerase] + ATP = phospho-[DNA-directed RNA polymerase] + ADP + H(+).", "evidence": [ { "id": "O80345", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O80345" } ] }, { "ec_number": "2.7.11.23", "activity": "", "evidence": [ { "id": "O80345", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O80345" } ] }, { "ec_number": "2.7.11.22", "activity": "", "evidence": [ { "id": "O80345", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O80345" } ] } ] }, { "uniprot_ac": "O80396", "gene_name": "MKK3", "activity": [ { "ec_number": "2.7.12.2", "activity": "L-tyrosyl-[protein] + ATP = O-phospho-L-tyrosyl-[protein] + ADP + H(+).", "evidence": [ { "id": "O80396", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O80396" } ] }, { "ec_number": "2.7.12.2", "activity": "", "evidence": [ { "id": "O80396", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O80396" } ] } ] }, { "uniprot_ac": "O80397", "gene_name": "MKK4", "activity": [ { "ec_number": "2.7.12.2", "activity": "L-tyrosyl-[protein] + ATP = O-phospho-L-tyrosyl-[protein] + ADP + H(+).", "evidence": [ { "id": "O80397", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O80397" } ] }, { "ec_number": "2.7.12.2", "activity": "", "evidence": [ { "id": "O80397", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O80397" } ] } ] }, { "uniprot_ac": "O80528", "gene_name": "HASPIN", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O80528", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O80528" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O80528", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O80528" } ] } ] }, { "uniprot_ac": "O80673", "gene_name": "CRK1", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O80673", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O80673" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O80673", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O80673" } ] } ] }, { "uniprot_ac": "O80719", "gene_name": "CARK3", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O80719", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O80719" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O80719", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O80719" } ] } ] }, { "uniprot_ac": "O80888", "gene_name": "MAPKKK17", "activity": [ { "ec_number": "2.7.11.25", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O80888", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O80888" } ] }, { "ec_number": "2.7.11.25", "activity": "", "evidence": [ { "id": "O80888", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O80888" } ] } ] }, { "uniprot_ac": "O80902", "gene_name": "CIPK22", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O80902", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O80902" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O80902", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O80902" } ] } ] }, { "uniprot_ac": "O80939", "gene_name": "LECRK41", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O80939", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O80939" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O80939", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O80939" } ] } ] }, { "uniprot_ac": "O80963", "gene_name": "CCR2", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O80963", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O80963" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O80963", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O80963" } ] } ] }, { "uniprot_ac": "O81064", "gene_name": "PBL37", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O81064", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O81064" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O81064", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O81064" } ] } ] }, { "uniprot_ac": "O81067", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O81067", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O81067" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O81067", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O81067" } ] } ] }, { "uniprot_ac": "O81069", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O81069", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O81069" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O81069", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O81069" } ] } ] }, { "uniprot_ac": "O81291", "gene_name": "LECRK44", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O81291", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O81291" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O81291", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O81291" } ] } ] }, { "uniprot_ac": "O81292", "gene_name": "LECRK43", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O81292", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O81292" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O81292", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O81292" } ] } ] }, { "uniprot_ac": "O81472", "gene_name": "MEKK2", "activity": [ { "ec_number": "2.7.11.24", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O81472", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O81472" } ] }, { "ec_number": "2.7.11.24", "activity": "", "evidence": [ { "id": "O81472", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O81472" } ] } ] }, { "uniprot_ac": "O81832", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O81832", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O81832" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O81832", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O81832" } ] } ] }, { "uniprot_ac": "O81833", "gene_name": "SD11", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O81833", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O81833" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O81833", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O81833" } ] } ] }, { "uniprot_ac": "O81905", "gene_name": "SD18", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O81905", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O81905" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O81905", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O81905" } ] } ] }, { "uniprot_ac": "O81906", "gene_name": "B120", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O81906", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O81906" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O81906", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O81906" } ] } ] }, { "uniprot_ac": "O82318", "gene_name": "SKM1", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O82318", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O82318" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O82318", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O82318" } ] } ] }, { "uniprot_ac": "O82754", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "O82754", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O82754" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "O82754", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O82754" } ] } ] }, { "uniprot_ac": "P0C5E2", "gene_name": "LRK10L-1.2", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "P0C5E2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/P0C5E2" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "P0C5E2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/P0C5E2" } ] } ] }, { "uniprot_ac": "P0DKI6", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "P0DKI6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/P0DKI6" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "P0DKI6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/P0DKI6" } ] } ] }, { "uniprot_ac": "P24100", "gene_name": "CDKA-1", "activity": [ { "ec_number": "2.7.11.22", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "P24100", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/P24100" } ] }, { "ec_number": "2.7.11.23", "activity": "[DNA-directed RNA polymerase] + ATP = phospho-[DNA-directed RNA polymerase] + ADP + H(+).", "evidence": [ { "id": "P24100", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/P24100" } ] }, { "ec_number": "2.7.11.23", "activity": "", "evidence": [ { "id": "P24100", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/P24100" } ] }, { "ec_number": "2.7.11.22", "activity": "", "evidence": [ { "id": "P24100", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/P24100" } ] } ] }, { "uniprot_ac": "P25859", "gene_name": "CDKB1-1", "activity": [ { "ec_number": "2.7.11.22", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "P25859", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/P25859" } ] }, { "ec_number": "2.7.11.23", "activity": "[DNA-directed RNA polymerase] + ATP = phospho-[DNA-directed RNA polymerase] + ADP + H(+).", "evidence": [ { "id": "P25859", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/P25859" } ] }, { "ec_number": "2.7.11.22", "activity": "", "evidence": [ { "id": "P25859", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/P25859" } ] }, { "ec_number": "2.7.11.23", "activity": "", "evidence": [ { "id": "P25859", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/P25859" } ] } ] }, { "uniprot_ac": "P27450", "gene_name": "CST", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "P27450", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/P27450" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "P27450", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/P27450" } ] } ] }, { "uniprot_ac": "P42158", "gene_name": "CKL1", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "P42158", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/P42158" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "P42158", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/P42158" } ] } ] }, { "uniprot_ac": "P42818", "gene_name": "ATPK1", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "P42818", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/P42818" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "P42818", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/P42818" } ] } ] }, { "uniprot_ac": "P43288", "gene_name": "ASK1", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "P43288", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/P43288" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "P43288", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/P43288" } ] } ] }, { "uniprot_ac": "P43289", "gene_name": "ASK3", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "P43289", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/P43289" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "P43289", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/P43289" } ] } ] }, { "uniprot_ac": "P43291", "gene_name": "SRK2A", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "P43291", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/P43291" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "P43291", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/P43291" } ] } ] }, { "uniprot_ac": "P43292", "gene_name": "SRK2G", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "P43292", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/P43292" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "P43292", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/P43292" } ] } ] }, { "uniprot_ac": "P43293", "gene_name": "PBL11", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "P43293", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/P43293" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "P43293", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/P43293" } ] } ] }, { "uniprot_ac": "P43294", "gene_name": "MHK", "activity": [ { "ec_number": "2.7.11.22", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "P43294", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/P43294" } ] }, { "ec_number": "2.7.11.22", "activity": "", "evidence": [ { "id": "P43294", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/P43294" } ] } ] }, { "uniprot_ac": "P43298", "gene_name": "TMK1", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "P43298", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/P43298" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "P43298", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/P43298" } ] } ] }, { "uniprot_ac": "P46573", "gene_name": "PBL10", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "P46573", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/P46573" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "P46573", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/P46573" } ] } ] }, { "uniprot_ac": "P47735", "gene_name": "RLK5", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "P47735", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/P47735" } ] }, { "ec_number": "2.7.10.1", "activity": "L-tyrosyl-[protein] + ATP = O-phospho-L-tyrosyl-[protein] + ADP + H(+).", "evidence": [ { "id": "P47735", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/P47735" } ] }, { "ec_number": "2.7.10.1", "activity": "", "evidence": [ { "id": "P47735", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/P47735" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "P47735", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/P47735" } ] } ] }, { "uniprot_ac": "P51566", "gene_name": "AFC1", "activity": [ { "ec_number": "2.7.12.1", "activity": "L-tyrosyl-[protein] + ATP = O-phospho-L-tyrosyl-[protein] + ADP + H(+).", "evidence": [ { "id": "P51566", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/P51566" } ] }, { "ec_number": "2.7.12.1", "activity": "", "evidence": [ { "id": "P51566", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/P51566" } ] } ] }, { "uniprot_ac": "P51567", "gene_name": "AFC2", "activity": [ { "ec_number": "2.7.12.1", "activity": "L-tyrosyl-[protein] + ATP = O-phospho-L-tyrosyl-[protein] + ADP + H(+).", "evidence": [ { "id": "P51567", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/P51567" } ] }, { "ec_number": "2.7.12.1", "activity": "", "evidence": [ { "id": "P51567", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/P51567" } ] } ] }, { "uniprot_ac": "P51568", "gene_name": "AFC3", "activity": [ { "ec_number": "2.7.12.1", "activity": "L-tyrosyl-[protein] + ATP = O-phospho-L-tyrosyl-[protein] + ADP + H(+).", "evidence": [ { "id": "P51568", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/P51568" } ] }, { "ec_number": "2.7.12.1", "activity": "", "evidence": [ { "id": "P51568", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/P51568" } ] } ] }, { "uniprot_ac": "P92937", "gene_name": "CIPK15", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "P92937", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/P92937" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "P92937", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/P92937" } ] } ] }, { "uniprot_ac": "P92958", "gene_name": "KIN11", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "P92958", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/P92958" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "P92958", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/P92958" } ] } ] }, { "uniprot_ac": "P93025", "gene_name": "PHOT2", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "P93025", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/P93025" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "P93025", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/P93025" } ] } ] }, { "uniprot_ac": "P93050", "gene_name": "RKF3", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "P93050", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/P93050" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "P93050", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/P93050" } ] } ] }, { "uniprot_ac": "P93749", "gene_name": "CARK4", "activity": [ { "ec_number": "2.7.10.-", "activity": "", "evidence": [ { "id": "P93749", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/P93749" } ] } ] }, { "uniprot_ac": "P93756", "gene_name": "SD31", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "P93756", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/P93756" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "P93756", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/P93756" } ] } ] }, { "uniprot_ac": "P93759", "gene_name": "CPK14", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "P93759", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/P93759" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "P93759", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/P93759" } ] } ] }, { "uniprot_ac": "Q05609", "gene_name": "CTR1", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q05609", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q05609" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q05609", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q05609" } ] } ] }, { "uniprot_ac": "Q05999", "gene_name": "D6PKL3", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q05999", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q05999" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q05999", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q05999" } ] } ] }, { "uniprot_ac": "Q06548", "gene_name": "PBL9", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q06548", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q06548" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q06548", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q06548" } ] } ] }, { "uniprot_ac": "Q06850", "gene_name": "CPK1", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q06850", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q06850" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q06850", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q06850" } ] } ] }, { "uniprot_ac": "Q08466", "gene_name": "CKA2", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q08466", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q08466" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q08466", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q08466" } ] } ] }, { "uniprot_ac": "Q08467", "gene_name": "CKA1", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q08467", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q08467" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q08467", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q08467" } ] } ] }, { "uniprot_ac": "Q0PW40", "gene_name": "CRK13", "activity": [ { "ec_number": "2.7.11.-", "activity": "", "evidence": [ { "id": "Q0PW40", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q0PW40" } ] }, { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q0PW40", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q0PW40" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q0PW40", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q0PW40" } ] } ] }, { "uniprot_ac": "Q0V7T5", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q0V7T5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q0V7T5" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q0V7T5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q0V7T5" } ] } ] }, { "uniprot_ac": "Q0WNY5", "gene_name": "WAKL18", "activity": [ { "ec_number": "2.7.11.-", "activity": "", "evidence": [ { "id": "Q0WNY5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q0WNY5" } ] } ] }, { "uniprot_ac": "Q0WPH8", "gene_name": "NEK5", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q0WPH8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q0WPH8" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q0WPH8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q0WPH8" } ] } ] }, { "uniprot_ac": "Q0WRY5", "gene_name": "PBL7", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q0WRY5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q0WRY5" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q0WRY5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q0WRY5" } ] } ] }, { "uniprot_ac": "Q0WVM4", "gene_name": "CIK2", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q0WVM4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q0WVM4" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q0WVM4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q0WVM4" } ] } ] }, { "uniprot_ac": "Q1PDV6", "gene_name": "PBL27", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q1PDV6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q1PDV6" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q1PDV6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q1PDV6" } ] } ] }, { "uniprot_ac": "Q1PE17", "gene_name": "CPK18", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q1PE17", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q1PE17" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q1PE17", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q1PE17" } ] } ] }, { "uniprot_ac": "Q1PE89", "gene_name": "PBL24", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q1PE89", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q1PE89" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q1PE89", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q1PE89" } ] } ] }, { "uniprot_ac": "Q1PEM5", "gene_name": "PERK3", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q1PEM5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q1PEM5" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q1PEM5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q1PEM5" } ] } ] }, { "uniprot_ac": "Q1PFB9", "gene_name": "AGC1-7", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q1PFB9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q1PFB9" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q1PFB9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q1PFB9" } ] } ] }, { "uniprot_ac": "Q1PFH8", "gene_name": "CPK19", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q1PFH8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q1PFH8" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q1PFH8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q1PFH8" } ] } ] }, { "uniprot_ac": "Q2MHE4", "gene_name": "HT1", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q2MHE4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q2MHE4" } ] }, { "ec_number": "2.7.10.1", "activity": "L-tyrosyl-[protein] + ATP = O-phospho-L-tyrosyl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q2MHE4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q2MHE4" } ] }, { "ec_number": "2.7.10.1", "activity": "", "evidence": [ { "id": "Q2MHE4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q2MHE4" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q2MHE4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q2MHE4" } ] } ] }, { "uniprot_ac": "Q2QAV0", "gene_name": "TIO", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q2QAV0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q2QAV0" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q2QAV0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q2QAV0" } ] } ] }, { "uniprot_ac": "Q2V338", "gene_name": "WNK9", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q2V338", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q2V338" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q2V338", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q2V338" } ] } ] }, { "uniprot_ac": "Q2V419", "gene_name": "CDKB1-2", "activity": [ { "ec_number": "2.7.11.22", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q2V419", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q2V419" } ] }, { "ec_number": "2.7.11.23", "activity": "[DNA-directed RNA polymerase] + ATP = phospho-[DNA-directed RNA polymerase] + ADP + H(+).", "evidence": [ { "id": "Q2V419", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q2V419" } ] }, { "ec_number": "2.7.11.23", "activity": "", "evidence": [ { "id": "Q2V419", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q2V419" } ] }, { "ec_number": "2.7.11.22", "activity": "", "evidence": [ { "id": "Q2V419", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q2V419" } ] } ] }, { "uniprot_ac": "Q2V452", "gene_name": "CIPK3", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q2V452", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q2V452" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q2V452", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q2V452" } ] } ] }, { "uniprot_ac": "Q38868", "gene_name": "CPK9", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q38868", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q38868" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q38868", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q38868" } ] } ] }, { "uniprot_ac": "Q38869", "gene_name": "CPK4", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q38869", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q38869" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q38869", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q38869" } ] } ] }, { "uniprot_ac": "Q38870", "gene_name": "CPK2", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q38870", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q38870" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q38870", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q38870" } ] } ] }, { "uniprot_ac": "Q38871", "gene_name": "CPK5", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q38871", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q38871" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q38871", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q38871" } ] } ] }, { "uniprot_ac": "Q38872", "gene_name": "CPK6", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q38872", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q38872" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q38872", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q38872" } ] } ] }, { "uniprot_ac": "Q38873", "gene_name": "CPK7", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q38873", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q38873" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q38873", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q38873" } ] } ] }, { "uniprot_ac": "Q38997", "gene_name": "KIN10", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q38997", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q38997" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q38997", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q38997" } ] } ] }, { "uniprot_ac": "Q39008", "gene_name": "MEKK1", "activity": [ { "ec_number": "2.7.11.25", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q39008", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q39008" } ] }, { "ec_number": "2.7.11.25", "activity": "", "evidence": [ { "id": "Q39008", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q39008" } ] } ] }, { "uniprot_ac": "Q39010", "gene_name": "ASK6", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q39010", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q39010" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q39010", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q39010" } ] } ] }, { "uniprot_ac": "Q39011", "gene_name": "ASK7", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q39011", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q39011" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q39011", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q39011" } ] } ] }, { "uniprot_ac": "Q39012", "gene_name": "ASK9", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q39012", "database": "UniProtKB", "url": 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{ "id": "Q39019", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q39019" } ] } ] }, { "uniprot_ac": "Q39021", "gene_name": "MPK1", "activity": [ { "ec_number": "2.7.11.24", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q39021", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q39021" } ] }, { "ec_number": "2.7.11.24", "activity": "", "evidence": [ { "id": "Q39021", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q39021" } ] } ] }, { "uniprot_ac": "Q39022", "gene_name": "MPK2", "activity": [ { "ec_number": "2.7.11.24", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q39022", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q39022" } ] }, { "ec_number": "2.7.11.24", "activity": "", "evidence": [ { "id": "Q39022", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q39022" } ] } ] }, { "uniprot_ac": "Q39023", "gene_name": "MPK3", "activity": [ { "ec_number": "2.7.11.24", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q39023", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q39023" } ] }, { "ec_number": "2.7.11.24", "activity": "", "evidence": [ { "id": "Q39023", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q39023" } ] } ] }, { "uniprot_ac": "Q39024", "gene_name": "MPK4", "activity": [ { "ec_number": "2.7.11.24", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q39024", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q39024" } ] }, { "ec_number": "2.7.11.24", "activity": "", "evidence": [ { "id": "Q39024", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q39024" } ] } ] }, { "uniprot_ac": "Q39025", "gene_name": "MPK5", "activity": [ { "ec_number": "2.7.11.24", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q39025", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q39025" } ] }, { "ec_number": "2.7.11.24", "activity": "", "evidence": [ { "id": "Q39025", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q39025" } ] } ] }, { "uniprot_ac": "Q39026", "gene_name": "MPK6", "activity": [ { "ec_number": "2.7.11.24", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q39026", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q39026" } ] }, { "ec_number": "2.7.11.24", "activity": "", "evidence": [ { "id": "Q39026", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q39026" } ] } ] }, { "uniprot_ac": "Q39027", "gene_name": "MPK7", "activity": [ { "ec_number": "2.7.11.24", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q39027", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q39027" } ] }, { "ec_number": "2.7.11.24", "activity": "", "evidence": [ { "id": "Q39027", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q39027" } ] } ] }, { "uniprot_ac": "Q39030", "gene_name": "ATPK2", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q39030", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q39030" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q39030", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q39030" } ] } ] }, { "uniprot_ac": "Q39050", "gene_name": "CKL11", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q39050", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q39050" } ] }, { "ec_number": 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} ] } ] }, { "uniprot_ac": "Q3EDL4", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q3EDL4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q3EDL4" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q3EDL4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q3EDL4" } ] } ] }, { "uniprot_ac": "Q42371", "gene_name": "ERECTA", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q42371", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q42371" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q42371", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q42371" } ] } ] }, { "uniprot_ac": "Q42396", "gene_name": "CPK12", "activity": [ { "ec_number": "2.7.11.1", 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"L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q84M93", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q84M93" } ] }, { "ec_number": "2.7.11.24", "activity": "", "evidence": [ { "id": "Q84M93", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q84M93" } ] } ] }, { "uniprot_ac": "Q84M95", "gene_name": "PBL28", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q84M95", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q84M95" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q84M95", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q84M95" } ] } ] }, { "uniprot_ac": "Q84TI6", "gene_name": "CDKE-1", "activity": [ { "ec_number": "2.7.11.22", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q84TI6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q84TI6" } ] }, { "ec_number": "2.7.11.23", "activity": "[DNA-directed RNA polymerase] + ATP = phospho-[DNA-directed RNA polymerase] + ADP + H(+).", "evidence": [ { "id": "Q84TI6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q84TI6" } ] }, { "ec_number": "2.7.11.23", "activity": "", "evidence": [ { "id": "Q84TI6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q84TI6" } ] }, { "ec_number": "2.7.11.22", "activity": "", "evidence": [ { "id": "Q84TI6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q84TI6" } ] } ] }, { "uniprot_ac": "Q84VQ3", "gene_name": "CIPK26", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q84VQ3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q84VQ3" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q84VQ3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q84VQ3" } ] } ] }, { "uniprot_ac": "Q84VX4", "gene_name": "MPS1", "activity": [ { "ec_number": "2.7.12.2", "activity": "L-tyrosyl-[protein] + ATP = O-phospho-L-tyrosyl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q84VX4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q84VX4" } ] }, { "ec_number": "2.7.12.2", "activity": "", "evidence": [ { "id": "Q84VX4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q84VX4" } ] } ] }, { "uniprot_ac": "Q8GUH1", "gene_name": "PUB33", "activity": [ { "ec_number": "2.7.11.-", "activity": "", "evidence": [ { "id": "Q8GUH1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8GUH1" } ] }, { "ec_number": "2.3.2.27", "activity": "S-ubiquitinyl-[E2 ubiquitin-conjugating enzyme]-L-cysteine + [acceptor protein]-L-lysine = [E2 ubiquitin-conjugating enzyme]-L-cysteine + N(6)-ubiquitinyl-[acceptor protein]-L-lysine.", "evidence": [ { "id": "Q8GUH1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8GUH1" } ] } ] }, { "uniprot_ac": "Q8GWJ7", "gene_name": "CRK19", "activity": [ { "ec_number": "2.7.11.-", "activity": "", "evidence": [ { "id": "Q8GWJ7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8GWJ7" } ] } ] }, { "uniprot_ac": "Q8GX23", "gene_name": "PERK5", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q8GX23", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8GX23" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q8GX23", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8GX23" } ] } ] }, { "uniprot_ac": "Q8GXQ3", "gene_name": "WAKL6", "activity": [ { "ec_number": "2.7.11.-", "activity": "", "evidence": [ { "id": "Q8GXQ3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8GXQ3" } ] } ] }, { "uniprot_ac": "Q8GXZ3", "gene_name": "PBL8", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q8GXZ3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8GXZ3" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q8GXZ3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8GXZ3" } ] } ] }, { "uniprot_ac": "Q8GY82", "gene_name": "CRK45", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q8GY82", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8GY82" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q8GY82", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8GY82" } ] } ] }, { "uniprot_ac": "Q8GYA4", "gene_name": "CRK10", "activity": [ { "ec_number": "2.7.11.-", "activity": "", "evidence": [ { "id": "Q8GYA4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8GYA4" } ] } ] }, { "uniprot_ac": "Q8GYF5", "gene_name": "WAKL21", "activity": [ { "ec_number": "2.7.11.-", "activity": "", "evidence": [ { "id": "Q8GYF5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8GYF5" } ] } ] }, { "uniprot_ac": "Q8GYQ5", "gene_name": "MPK12", "activity": [ { "ec_number": "2.7.11.24", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q8GYQ5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8GYQ5" } ] }, { "ec_number": "2.7.11.24", "activity": "", "evidence": [ { "id": "Q8GYQ5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8GYQ5" } ] } ] }, { "uniprot_ac": "Q8GZ99", "gene_name": "HPCA1", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q8GZ99", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8GZ99" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q8GZ99", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8GZ99" } ] } ] }, { "uniprot_ac": "Q8H186", "gene_name": "PBL1", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q8H186", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8H186" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q8H186", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8H186" } ] } ] }, { "uniprot_ac": "Q8H199", "gene_name": "CRK14", "activity": [ { "ec_number": "2.7.11.-", "activity": "", "evidence": [ { "id": "Q8H199", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8H199" } ] } ] }, { "uniprot_ac": "Q8H1D6", "gene_name": "RBK1", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q8H1D6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8H1D6" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q8H1D6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8H1D6" } ] } ] }, { "uniprot_ac": "Q8H1E3", "gene_name": "PBL17", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q8H1E3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8H1E3" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q8H1E3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8H1E3" } ] } ] }, { "uniprot_ac": "Q8H1G6", "gene_name": "CARK7", "activity": [ { "ec_number": "2.7.10.-", "activity": "", "evidence": [ { "id": "Q8H1G6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8H1G6" } ] } ] }, { "uniprot_ac": "Q8L617", "gene_name": "SZE1", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q8L617", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8L617" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q8L617", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8L617" } ] } ] }, { "uniprot_ac": "Q8L710", "gene_name": "CRK17", "activity": [ { "ec_number": "2.7.11.-", "activity": "", "evidence": [ { "id": "Q8L710", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8L710" } ] } ] }, { "uniprot_ac": "Q8L7G3", "gene_name": "CRK7", "activity": [ { "ec_number": "2.7.11.-", "activity": "", "evidence": [ { "id": "Q8L7G3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8L7G3" } ] } ] }, { "uniprot_ac": "Q8LEB6", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q8LEB6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8LEB6" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q8LEB6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8LEB6" } ] } ] }, { "uniprot_ac": "Q8LF80", "gene_name": "CDKB2-1", "activity": [ { "ec_number": "2.7.11.22", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q8LF80", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8LF80" } ] }, { "ec_number": "2.7.11.23", "activity": "[DNA-directed RNA polymerase] + ATP = phospho-[DNA-directed RNA polymerase] + ADP + H(+).", "evidence": [ { "id": "Q8LF80", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8LF80" } ] }, { "ec_number": "2.7.11.22", "activity": "", "evidence": [ { "id": "Q8LF80", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8LF80" } ] }, { "ec_number": "2.7.11.23", "activity": "", "evidence": [ { "id": "Q8LF80", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8LF80" } ] } ] }, { "uniprot_ac": "Q8LG64", "gene_name": "CDKB2-2", "activity": [ { "ec_number": "2.7.11.22", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q8LG64", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8LG64" } ] }, { "ec_number": "2.7.11.23", "activity": "[DNA-directed RNA polymerase] + ATP = phospho-[DNA-directed RNA polymerase] + ADP + H(+).", "evidence": [ { "id": "Q8LG64", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8LG64" } ] }, { "ec_number": "2.7.11.23", "activity": "", "evidence": [ { "id": "Q8LG64", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8LG64" } ] }, { "ec_number": "2.7.11.22", "activity": "", "evidence": [ { "id": "Q8LG64", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8LG64" } ] } ] }, { "uniprot_ac": "Q8LPI7", "gene_name": "CKL4", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q8LPI7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8LPI7" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q8LPI7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8LPI7" } ] } ] }, { "uniprot_ac": "Q8LPJ1", "gene_name": "CKL6", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q8LPJ1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8LPJ1" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q8LPJ1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8LPJ1" } ] } ] }, { "uniprot_ac": "Q8LPS5", "gene_name": "SERK5", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q8LPS5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8LPS5" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q8LPS5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8LPS5" } ] } ] }, { "uniprot_ac": "Q8LST2", "gene_name": "WNK7", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q8LST2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8LST2" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q8LST2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8LST2" } ] } ] }, { "uniprot_ac": "Q8RWC9", "gene_name": "CIPK1", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q8RWC9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8RWC9" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q8RWC9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8RWC9" } ] } ] }, { "uniprot_ac": "Q8RWG1", "gene_name": "ABC1K1", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q8RWG1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8RWG1" } ] }, { "ec_number": "2.7.-.-", "activity": "", "evidence": [ { "id": "Q8RWG1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8RWG1" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q8RWG1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8RWG1" } ] } ] }, { "uniprot_ac": "Q8RWH3", "gene_name": "YAK1", "activity": [ { "ec_number": "2.7.12.1", "activity": "L-tyrosyl-[protein] + ATP = O-phospho-L-tyrosyl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q8RWH3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8RWH3" } ] }, { "ec_number": "2.7.12.1", "activity": "", "evidence": [ { "id": "Q8RWH3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8RWH3" } ] } ] }, { "uniprot_ac": "Q8RWL2", "gene_name": "CPK29", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q8RWL2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8RWL2" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q8RWL2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8RWL2" } ] } ] }, { "uniprot_ac": "Q8RWL6", "gene_name": "STY17", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q8RWL6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8RWL6" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q8RWL6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8RWL6" } ] } ] }, { "uniprot_ac": "Q8RWW0", "gene_name": "ALE2", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q8RWW0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8RWW0" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q8RWW0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8RWW0" } ] } ] }, { "uniprot_ac": "Q8RWX4", "gene_name": "KOC1", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q8RWX4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8RWX4" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q8RWX4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8RWX4" } ] } ] }, { "uniprot_ac": "Q8RWZ5", "gene_name": "SD25", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q8RWZ5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8RWZ5" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q8RWZ5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8RWZ5" } ] } ] }, { "uniprot_ac": "Q8RX66", "gene_name": "NEK3", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q8RX66", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8RX66" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q8RX66", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8RX66" } ] } ] }, { "uniprot_ac": "Q8RX80", "gene_name": "CRK18", "activity": [ { "ec_number": "2.7.11.-", "activity": "", "evidence": [ { "id": "Q8RX80", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8RX80" } ] } ] }, { "uniprot_ac": "Q8RXC8", "gene_name": "RBK2", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q8RXC8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8RXC8" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q8RXC8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8RXC8" } ] } ] }, { "uniprot_ac": "Q8RXE5", "gene_name": "WNK10", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q8RXE5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8RXE5" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q8RXE5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8RXE5" } ] } ] }, { "uniprot_ac": "Q8RXG3", "gene_name": "MKK5", "activity": [ { "ec_number": "2.7.12.2", "activity": "L-tyrosyl-[protein] + ATP = O-phospho-L-tyrosyl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q8RXG3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8RXG3" } ] }, { "ec_number": "2.7.12.2", "activity": "", "evidence": [ { "id": "Q8RXG3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8RXG3" } ] } ] }, { "uniprot_ac": "Q8RXT4", "gene_name": "NEK4", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q8RXT4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8RXT4" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q8RXT4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8RXT4" } ] } ] }, { "uniprot_ac": "Q8RY17", "gene_name": "WAKL22", "activity": [ { "ec_number": "2.7.11.-", "activity": "", "evidence": [ { "id": "Q8RY17", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8RY17" } ] } ] }, { "uniprot_ac": "Q8RY65", "gene_name": "CIK6", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q8RY65", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8RY65" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q8RY65", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8RY65" } ] } ] }, { "uniprot_ac": "Q8RY67", "gene_name": "WAKL14", "activity": [ { "ec_number": "2.7.11.-", "activity": "", "evidence": [ { "id": "Q8RY67", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8RY67" } ] } ] }, { "uniprot_ac": "Q8S8S7", "gene_name": "PUB34", "activity": [ { "ec_number": "2.7.11.-", "activity": "", "evidence": [ { "id": "Q8S8S7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8S8S7" } ] }, { "ec_number": "2.3.2.27", "activity": "S-ubiquitinyl-[E2 ubiquitin-conjugating enzyme]-L-cysteine + [acceptor protein]-L-lysine = [E2 ubiquitin-conjugating enzyme]-L-cysteine + N(6)-ubiquitinyl-[acceptor protein]-L-lysine.", "evidence": [ { "id": "Q8S8S7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8S8S7" } ] }, { "ec_number": "2.3.2.27", "activity": "", "evidence": [ { "id": "Q8S8S7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8S8S7" } ] } ] }, { "uniprot_ac": "Q8S8Y8", "gene_name": "WNK6", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q8S8Y8", "database": "UniProtKB", "url": 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{ "id": "Q8S9L6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8S9L6" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q8S9L6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8S9L6" } ] } ] }, { "uniprot_ac": "Q8VYA3", "gene_name": "WAKL10", "activity": [ { "ec_number": "2.7.11.-", "activity": "", "evidence": [ { "id": "Q8VYA3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8VYA3" } ] } ] }, { "uniprot_ac": "Q8VYG0", "gene_name": "LRK10L-1.3", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q8VYG0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8VYG0" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q8VYG0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8VYG0" } ] } ] }, { "uniprot_ac": "Q8VYK9", "gene_name": "CKL12", "activity": [ { 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] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q8VZF4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8VZF4" } ] } ] }, { "uniprot_ac": "Q8VZG8", "gene_name": "MIK2", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q8VZG8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8VZG8" } ] } ] }, { "uniprot_ac": "Q8VZJ9", "gene_name": "CRCK2", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q8VZJ9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8VZJ9" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q8VZJ9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8VZJ9" } ] } ] }, { "uniprot_ac": "Q8W1D5", "gene_name": "CIPK25", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q8W1D5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8W1D5" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q8W1D5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8W1D5" } ] } ] }, { "uniprot_ac": "Q8W490", "gene_name": "PEPKR2", "activity": [ { "ec_number": "2.7.11.-", "activity": "", "evidence": [ { "id": "Q8W490", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8W490" } ] } ] }, { "uniprot_ac": "Q8W4G6", "gene_name": "CRK15", "activity": [ { "ec_number": "2.7.11.-", "activity": "", "evidence": [ { "id": "Q8W4G6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8W4G6" } ] } ] }, { "uniprot_ac": "Q8W4I7", "gene_name": "CPK13", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": 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"ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q8W4L3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8W4L3" } ] } ] }, { "uniprot_ac": "Q8W4P1", "gene_name": "CDKC-2", "activity": [ { "ec_number": "2.7.11.22", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q8W4P1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8W4P1" } ] }, { "ec_number": "2.7.11.23", "activity": "[DNA-directed RNA polymerase] + ATP = phospho-[DNA-directed RNA polymerase] + ADP + H(+).", "evidence": [ { "id": "Q8W4P1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8W4P1" } ] }, { "ec_number": "2.7.11.22", "activity": "", "evidence": [ { "id": "Q8W4P1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q8W4P1" } ] }, { "ec_number": "2.7.11.23", "activity": "", "evidence": [ { "id": "Q8W4P1", "database": "UniProtKB", "url": 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}, { "uniprot_ac": "Q93VK0", "gene_name": "PPCK2", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q93VK0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q93VK0" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q93VK0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q93VK0" } ] } ] }, { "uniprot_ac": "Q93Y08", "gene_name": "ABC1K8", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q93Y08", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q93Y08" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q93Y08", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q93Y08" } ] } ] }, { "uniprot_ac": "Q93YN1", "gene_name": "CRPK1", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q93YN1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q93YN1" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q93YN1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q93YN1" } ] } ] }, { "uniprot_ac": "Q93Z18", "gene_name": "CKL3", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q93Z18", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q93Z18" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q93Z18", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q93Z18" } ] } ] }, { "uniprot_ac": "Q93Z30", "gene_name": "BHP", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q93Z30", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q93Z30" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q93Z30", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q93Z30" } ] } ] }, { "uniprot_ac": "Q93ZS4", "gene_name": "CIK1", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q93ZS4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q93ZS4" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q93ZS4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q93ZS4" } ] } ] }, { "uniprot_ac": "Q940A2", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q940A2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q940A2" } ] }, { "ec_number": "3.1.3.16", "activity": "O-phospho-L-threonyl-[protein] + H2O = L-threonyl-[protein] + phosphate.", "evidence": [ { "id": "Q940A2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q940A2" } ] }, { "ec_number": "3.1.3.16", "activity": "", "evidence": [ { "id": "Q940A2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q940A2" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q940A2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q940A2" } ] } ] }, { "uniprot_ac": "Q940H6", "gene_name": "SRK2E", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q940H6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q940H6" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q940H6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q940H6" } ] } ] }, { "uniprot_ac": "Q944A7", "gene_name": "BSK1", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q944A7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q944A7" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q944A7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q944A7" } ] } ] }, { "uniprot_ac": "Q944Q0", "gene_name": "WNK8", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q944Q0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q944Q0" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q944Q0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q944Q0" } ] } ] }, { "uniprot_ac": "Q94A06", "gene_name": "MKK1", "activity": [ { "ec_number": "2.7.12.2", "activity": "L-tyrosyl-[protein] + ATP = O-phospho-L-tyrosyl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q94A06", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q94A06" } ] }, { "ec_number": "2.7.12.2", "activity": "", "evidence": [ { "id": "Q94A06", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q94A06" } ] } ] }, { "uniprot_ac": "Q94AG2", "gene_name": "SERK1", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q94AG2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q94AG2" } ] }, { "ec_number": "2.7.10.1", "activity": "L-tyrosyl-[protein] + ATP = O-phospho-L-tyrosyl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q94AG2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q94AG2" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q94AG2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q94AG2" } ] }, { "ec_number": "2.7.10.1", "activity": "", "evidence": [ { "id": "Q94AG2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q94AG2" } ] } ] }, { "uniprot_ac": "Q94C25", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q94C25", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q94C25" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q94C25", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q94C25" } ] } ] }, { "uniprot_ac": "Q94C40", "gene_name": "CIPK17", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q94C40", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q94C40" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q94C40", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q94C40" } ] } ] }, { "uniprot_ac": "Q94CG0", "gene_name": "CIPK21", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q94CG0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q94CG0" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q94CG0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q94CG0" } ] } ] }, { "uniprot_ac": "Q94F62", "gene_name": "BAK1", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q94F62", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q94F62" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q94F62", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q94F62" } ] }, { "ec_number": "2.7.10.1", "activity": "L-tyrosyl-[protein] + ATP = O-phospho-L-tyrosyl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q94F62", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q94F62" } ] }, { "ec_number": "2.7.10.1", "activity": "", "evidence": [ { "id": "Q94F62", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q94F62" } ] } ] }, { "uniprot_ac": "Q96285", "gene_name": "LECRK55", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q96285", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q96285" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q96285", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q96285" } ] } ] }, { "uniprot_ac": "Q96287", "gene_name": "ASK8", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q96287", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q96287" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q96287", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q96287" } ] } ] }, { "uniprot_ac": "Q9ASQ5", "gene_name": "CRCK3", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9ASQ5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9ASQ5" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9ASQ5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9ASQ5" } ] } ] }, { "uniprot_ac": "Q9ASQ6", "gene_name": "RFK1", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9ASQ6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9ASQ6" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9ASQ6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9ASQ6" } ] } ] }, { "uniprot_ac": "Q9C562", "gene_name": "CIPK10", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9C562", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9C562" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9C562", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9C562" } ] } ] }, { "uniprot_ac": "Q9C5C0", "gene_name": "MPK18", "activity": [ { "ec_number": "2.7.11.24", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9C5C0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9C5C0" } ] }, { "ec_number": "2.7.11.24", "activity": "", "evidence": [ { "id": "Q9C5C0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9C5C0" } ] } ] }, { "uniprot_ac": "Q9C5H5", "gene_name": "MAPKKK5", "activity": [ { "ec_number": "2.7.11.25", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9C5H5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9C5H5" } ] }, { "ec_number": "2.7.11.25", "activity": "", "evidence": [ { "id": "Q9C5H5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9C5H5" } ] } ] }, { "uniprot_ac": "Q9C5S2", "gene_name": "IRE1A", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9C5S2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9C5S2" } ] }, { "ec_number": "3.1.26.-", "activity": "", "evidence": [ { "id": "Q9C5S2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9C5S2" } ] } ] }, { "uniprot_ac": "Q9C5S8", "gene_name": "CRK5", "activity": [ { "ec_number": "2.7.11.-", "activity": "", "evidence": [ { "id": "Q9C5S8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9C5S8" } ] } ] }, { "uniprot_ac": "Q9C5S9", "gene_name": "CRK6", "activity": [ { "ec_number": "2.7.11.-", "activity": "", "evidence": [ { "id": "Q9C5S9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9C5S9" } ] } ] }, { "uniprot_ac": "Q9C660", "gene_name": "PERK10", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9C660", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9C660" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9C660", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9C660" } ] } ] }, { "uniprot_ac": "Q9C6K9", "gene_name": "LRK10L-1.1", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9C6K9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9C6K9" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9C6K9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9C6K9" } ] } ] }, { "uniprot_ac": "Q9C6P3", "gene_name": "CPK33", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9C6P3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9C6P3" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9C6P3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9C6P3" } ] } ] }, { "uniprot_ac": "Q9C7S5", "gene_name": "PSY1R", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9C7S5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9C7S5" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9C7S5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9C7S5" } ] } ] }, { "uniprot_ac": "Q9C821", "gene_name": "PERK15", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9C821", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9C821" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9C821", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9C821" } ] } ] }, { "uniprot_ac": "Q9C8M5", "gene_name": "WAG1", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9C8M5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9C8M5" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9C8M5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9C8M5" } ] } ] }, { "uniprot_ac": "Q9C902", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9C902", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9C902" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9C902", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9C902" } ] } ] }, { "uniprot_ac": "Q9C958", "gene_name": "SRK2B", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9C958", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9C958" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9C958", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9C958" } ] } ] }, { "uniprot_ac": "Q9C9L5", "gene_name": "WAKL9", "activity": [ { "ec_number": "2.7.11.-", "activity": "", "evidence": [ { "id": "Q9C9L5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9C9L5" } ] } ] }, { "uniprot_ac": "Q9C9M7", "gene_name": "CDKD-2", "activity": [ { "ec_number": "2.7.11.22", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9C9M7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9C9M7" } ] }, { "ec_number": "2.7.11.23", "activity": "[DNA-directed RNA polymerase] + ATP = phospho-[DNA-directed RNA polymerase] + ADP + H(+).", "evidence": [ { "id": "Q9C9M7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9C9M7" } ] }, { "ec_number": "2.7.11.22", "activity": "", "evidence": [ { "id": "Q9C9M7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9C9M7" } ] }, { "ec_number": "2.7.11.23", "activity": "", "evidence": [ { "id": "Q9C9M7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9C9M7" } ] } ] }, { "uniprot_ac": "Q9C9U2", "gene_name": "CDKD-1", "activity": [ { "ec_number": "2.7.11.22", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9C9U2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9C9U2" } ] }, { "ec_number": "2.7.11.23", "activity": "[DNA-directed RNA polymerase] + ATP = phospho-[DNA-directed RNA polymerase] + ADP + H(+).", "evidence": [ { "id": "Q9C9U2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9C9U2" } ] }, { "ec_number": "2.7.11.23", "activity": "", "evidence": [ { "id": "Q9C9U2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9C9U2" } ] }, { "ec_number": "2.7.11.22", "activity": "", "evidence": [ { "id": "Q9C9U2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9C9U2" } ] } ] }, { "uniprot_ac": "Q9C9U4", "gene_name": "MPK15", "activity": 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] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9FE20", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FE20" } ] } ] }, { "uniprot_ac": "Q9FF29", "gene_name": "PR5K", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9FF29", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FF29" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9FF29", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FF29" } ] } ] }, { "uniprot_ac": "Q9FF31", "gene_name": "LRK10L-2.1", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9FF31", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FF31" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9FF31", "database": 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O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9FIJ6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FIJ6" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9FIJ6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FIJ6" } ] } ] }, { "uniprot_ac": "Q9FIL1", "gene_name": "BSK5", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9FIL1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FIL1" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9FIL1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FIL1" } ] } ] }, { "uniprot_ac": "Q9FIL7", "gene_name": "CRCK1", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9FIL7", "database": "UniProtKB", "url": 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{ "id": "Q9FIU5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FIU5" } ] } ] }, { "uniprot_ac": "Q9FIZ3", "gene_name": "GSO2", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9FIZ3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FIZ3" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9FIZ3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FIZ3" } ] } ] }, { "uniprot_ac": "Q9FJ54", "gene_name": "CIPK20", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9FJ54", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FJ54" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9FJ54", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FJ54" } ] } ] }, { "uniprot_ac": "Q9FJ55", "gene_name": "CIPK19", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9FJ55", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FJ55" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9FJ55", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FJ55" } ] } ] }, { "uniprot_ac": "Q9FJI4", "gene_name": "LECRK111", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9FJI4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FJI4" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9FJI4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FJI4" } ] } ] }, { "uniprot_ac": "Q9FJV0", "gene_name": "MKK6", "activity": [ { "ec_number": "2.7.12.2", "activity": "L-tyrosyl-[protein] + ATP = O-phospho-L-tyrosyl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9FJV0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FJV0" } ] }, { "ec_number": "2.7.12.2", "activity": "", "evidence": [ { "id": "Q9FJV0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FJV0" } ] } ] }, { "uniprot_ac": "Q9FK63", "gene_name": "CAMRLK", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9FK63", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FK63" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9FK63", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FK63" } ] } ] }, { "uniprot_ac": "Q9FKG5", "gene_name": "PUB51", "activity": [ { "ec_number": "2.7.11.-", "activity": "", "evidence": [ { "id": "Q9FKG5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FKG5" } ] }, { "ec_number": "2.3.2.27", "activity": "S-ubiquitinyl-[E2 ubiquitin-conjugating enzyme]-L-cysteine + [acceptor protein]-L-lysine = [E2 ubiquitin-conjugating enzyme]-L-cysteine + N(6)-ubiquitinyl-[acceptor protein]-L-lysine.", "evidence": [ { "id": "Q9FKG5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FKG5" } ] }, { "ec_number": "2.3.2.27", "activity": "", "evidence": [ { "id": "Q9FKG5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FKG5" } ] } ] }, { "uniprot_ac": "Q9FKG6", "gene_name": "PUB52", "activity": [ { "ec_number": "2.7.11.-", "activity": "", "evidence": [ { "id": "Q9FKG6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FKG6" } ] }, { "ec_number": "2.3.2.27", "activity": "S-ubiquitinyl-[E2 ubiquitin-conjugating enzyme]-L-cysteine + [acceptor protein]-L-lysine = [E2 ubiquitin-conjugating enzyme]-L-cysteine + N(6)-ubiquitinyl-[acceptor protein]-L-lysine.", "evidence": [ { "id": "Q9FKG6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FKG6" } ] } ] }, { "uniprot_ac": "Q9FKS4", "gene_name": "ATR", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9FKS4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FKS4" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9FKS4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FKS4" } ] } ] }, { "uniprot_ac": "Q9FKW4", "gene_name": "CPK28", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9FKW4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FKW4" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9FKW4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FKW4" } ] } ] }, { "uniprot_ac": "Q9FL28", "gene_name": "FLS2", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9FL28", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FL28" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9FL28", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FL28" } ] } ] }, { "uniprot_ac": "Q9FLV4", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9FLV4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FLV4" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9FLV4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FLV4" } ] } ] }, { "uniprot_ac": "Q9FLZ3", "gene_name": "KIN12", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9FLZ3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FLZ3" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9FLZ3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FLZ3" } ] } ] }, { "uniprot_ac": "Q9FM85", "gene_name": "PBL16", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9FM85", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FM85" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9FM85", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FM85" } ] } ] }, { "uniprot_ac": "Q9FMP5", "gene_name": "CPK17", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9FMP5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FMP5" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9FMP5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FMP5" } ] } ] }, { "uniprot_ac": "Q9FMY3", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9FMY3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FMY3" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9FMY3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FMY3" } ] } ] }, { "uniprot_ac": "Q9FN37", "gene_name": "PSKR2", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9FN37", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FN37" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9FN37", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FN37" } ] } ] }, { "uniprot_ac": "Q9FN93", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9FN93", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FN93" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9FN93", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FN93" } ] } ] }, { "uniprot_ac": "Q9FN94", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9FN94", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FN94" } ] }, { "ec_number": "2.7.10.1", "activity": "L-tyrosyl-[protein] + ATP = O-phospho-L-tyrosyl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9FN94", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FN94" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9FN94", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FN94" } ] }, { "ec_number": "2.7.10.1", "activity": "", "evidence": [ { "id": "Q9FN94", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FN94" } ] } ] }, { "uniprot_ac": "Q9FNE1", "gene_name": "CRK42", "activity": [ { "ec_number": "2.7.11.-", "activity": "", "evidence": [ { "id": "Q9FNE1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FNE1" } ] }, { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9FNE1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FNE1" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9FNE1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FNE1" } ] } ] }, { "uniprot_ac": "Q9FPR3", "gene_name": "EDR1", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9FPR3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FPR3" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9FPR3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FPR3" } ] } ] }, { "uniprot_ac": "Q9FR53", "gene_name": "TOR", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9FR53", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FR53" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9FR53", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FR53" } ] } ] }, { "uniprot_ac": "Q9FRS6", "gene_name": "PXL1", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9FRS6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FRS6" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9FRS6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FRS6" } ] } ] }, { "uniprot_ac": "Q9FVS6", "gene_name": "ASK4", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9FVS6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FVS6" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9FVS6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FVS6" } ] } ] }, { "uniprot_ac": "Q9FX43", "gene_name": "MKK9", "activity": [ { "ec_number": "2.7.12.2", "activity": "L-tyrosyl-[protein] + ATP = O-phospho-L-tyrosyl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9FX43", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FX43" } ] }, { "ec_number": "2.7.12.2", "activity": "", "evidence": [ { "id": "Q9FX43", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FX43" } ] } ] }, { "uniprot_ac": "Q9FX86", "gene_name": "CRK8", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9FX86", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FX86" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9FX86", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FX86" } ] } ] }, { "uniprot_ac": "Q9FX99", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9FX99", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FX99" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9FX99", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FX99" } ] } ] }, { "uniprot_ac": "Q9FXF2", "gene_name": "RKF1", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9FXF2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FXF2" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9FXF2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FXF2" } ] } ] }, { "uniprot_ac": "Q9FY48", "gene_name": "KEG", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9FY48", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FY48" } ] }, { "ec_number": "2.3.2.27", "activity": "S-ubiquitinyl-[E2 ubiquitin-conjugating enzyme]-L-cysteine + [acceptor protein]-L-lysine = [E2 ubiquitin-conjugating enzyme]-L-cysteine + N(6)-ubiquitinyl-[acceptor protein]-L-lysine.", "evidence": [ { "id": "Q9FY48", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FY48" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9FY48", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FY48" } ] }, { "ec_number": "2.3.2.27", "activity": "", "evidence": [ { "id": "Q9FY48", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FY48" } ] } ] }, { "uniprot_ac": "Q9FYC5", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9FYC5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FYC5" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9FYC5", "database": "UniProtKB", "url": 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"activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9FZ59", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FZ59" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9FZ59", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FZ59" } ] } ] }, { "uniprot_ac": "Q9FZB1", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9FZB1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FZB1" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9FZB1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FZB1" } ] } ] }, { "uniprot_ac": "Q9FZB8", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9FZB8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FZB8" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9FZB8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9FZB8" } ] } ] }, { "uniprot_ac": "Q9LDI3", "gene_name": "CIPK24", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9LDI3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LDI3" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9LDI3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LDI3" } ] } ] }, { "uniprot_ac": "Q9LDM5", "gene_name": "CRK31", "activity": [ { "ec_number": "2.7.11.-", "activity": "", "evidence": [ { "id": "Q9LDM5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LDM5" } ] } ] }, { "uniprot_ac": "Q9LDN1", "gene_name": "CRK33", "activity": [ { "ec_number": "2.7.11.-", "activity": "", "evidence": [ { "id": "Q9LDN1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LDN1" } ] } ] }, { "uniprot_ac": "Q9LDN6", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9LDN6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LDN6" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9LDN6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LDN6" } ] } ] }, { "uniprot_ac": "Q9LDQ1", "gene_name": "PEPKR1", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9LDQ1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LDQ1" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9LDQ1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LDQ1" } ] } ] }, { "uniprot_ac": "Q9LDQ3", "gene_name": "CRK34", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9LDQ3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LDQ3" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9LDQ3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LDQ3" } ] } ] }, { "uniprot_ac": "Q9LDS6", "gene_name": "CRK32", "activity": [ { "ec_number": "2.7.11.-", "activity": "", "evidence": [ { "id": "Q9LDS6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LDS6" } ] } ] }, { "uniprot_ac": "Q9LDT0", "gene_name": "CRK30", "activity": [ { "ec_number": "2.7.11.-", "activity": "", "evidence": [ { "id": "Q9LDT0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LDT0" } ] } ] }, { "uniprot_ac": "Q9LDZ5", "gene_name": "PBL21", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9LDZ5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LDZ5" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9LDZ5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LDZ5" } ] } ] }, { "uniprot_ac": "Q9LE81", "gene_name": "IRE", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9LE81", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LE81" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9LE81", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LE81" } ] } ] }, { "uniprot_ac": "Q9LEA3", "gene_name": "LECRK56", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9LEA3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LEA3" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9LEA3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LEA3" } ] } ] }, { "uniprot_ac": "Q9LET1", "gene_name": "CRK7", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9LET1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LET1" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9LET1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LET1" } ] } ] }, { "uniprot_ac": "Q9LEU7", "gene_name": "CIPK5", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9LEU7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LEU7" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9LEU7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LEU7" } ] } ] }, { "uniprot_ac": "Q9LFA2", "gene_name": "KIPK1", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9LFA2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LFA2" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9LFA2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LFA2" } ] } ] }, { "uniprot_ac": "Q9LFD0", "gene_name": "BSK10", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9LFD0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LFD0" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9LFD0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LFD0" } ] } ] }, { "uniprot_ac": "Q9LFG1", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9LFG1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LFG1" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9LFG1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LFG1" } ] } ] }, { "uniprot_ac": "Q9LFH9", "gene_name": "LECRK81", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9LFH9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LFH9" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9LFH9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LFH9" } ] } ] }, { 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"L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9LFT8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LFT8" } ] }, { "ec_number": "2.7.11.23", "activity": "[DNA-directed RNA polymerase] + ATP = phospho-[DNA-directed RNA polymerase] + ADP + H(+).", "evidence": [ { "id": "Q9LFT8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LFT8" } ] }, { "ec_number": "2.7.11.22", "activity": "", "evidence": [ { "id": "Q9LFT8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LFT8" } ] }, { "ec_number": "2.7.11.23", "activity": "", "evidence": [ { "id": "Q9LFT8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LFT8" } ] } ] }, { "uniprot_ac": "Q9LFV3", "gene_name": "CRLK2", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9LFV3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LFV3" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9LFV3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LFV3" } ] } ] }, { "uniprot_ac": "Q9LHI7", "gene_name": "NEK7", "activity": [ { "ec_number": "2.7.11.34", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9LHI7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LHI7" } ] }, { "ec_number": "2.7.11.34", "activity": "", "evidence": [ { "id": "Q9LHI7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LHI7" } ] } ] }, { "uniprot_ac": "Q9LHM1", "gene_name": "MEC18.8", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9LHM1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LHM1" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9LHM1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LHM1" } ] } ] }, { "uniprot_ac": "Q9LHP4", "gene_name": "RGI1", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9LHP4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LHP4" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9LHP4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LHP4" } ] } ] }, { "uniprot_ac": "Q9LIG2", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9LIG2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LIG2" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9LIG2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LIG2" } ] 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"evidence": [ { "id": "Q9LJL9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LJL9" } ] } ] }, { "uniprot_ac": "Q9LJM4", "gene_name": "IKU2", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9LJM4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LJM4" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9LJM4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LJM4" } ] } ] }, { "uniprot_ac": "Q9LJY0", "gene_name": "PRK4", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9LJY0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LJY0" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9LJY0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LJY0" } ] } ] }, { "uniprot_ac": "Q9LK03", "gene_name": "PERK2", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9LK03", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LK03" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9LK03", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LK03" } ] } ] }, { "uniprot_ac": "Q9LK43", "gene_name": "TMK4", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9LK43", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LK43" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9LK43", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LK43" } ] } ] }, { "uniprot_ac": "Q9LM33", "gene_name": "MPK8", "activity": [ { "ec_number": "2.7.11.24", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9LM33", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LM33" } ] }, { "ec_number": "2.7.11.24", "activity": "", "evidence": [ { "id": "Q9LM33", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LM33" } ] } ] }, { "uniprot_ac": "Q9LMB9", "gene_name": "CRK1", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9LMB9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LMB9" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9LMB9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LMB9" } ] } ] }, { "uniprot_ac": "Q9LMM5", "gene_name": "MPK11", "activity": [ { "ec_number": "2.7.11.24", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9LMM5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LMM5" } ] }, { "ec_number": "2.7.11.24", "activity": "", "evidence": [ { "id": "Q9LMM5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LMM5" } ] } ] }, { "uniprot_ac": "Q9LMN6", "gene_name": "WAK4", "activity": [ { "ec_number": "2.7.11.-", "activity": "", "evidence": [ { "id": "Q9LMN6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LMN6" } ] } ] }, { "uniprot_ac": "Q9LMN7", "gene_name": "WAK5", "activity": [ { "ec_number": "2.7.11.-", "activity": "", "evidence": [ { "id": "Q9LMN7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LMN7" } ] } ] }, { "uniprot_ac": "Q9LMN8", "gene_name": "WAK3", "activity": [ { "ec_number": "2.7.11.-", "activity": "", "evidence": [ { "id": "Q9LMN8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LMN8" } ] } ] }, { "uniprot_ac": "Q9LMP1", "gene_name": "WAK2", "activity": [ { "ec_number": "2.7.11.-", "activity": "", "evidence": [ { "id": "Q9LMP1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LMP1" } ] } ] }, { "uniprot_ac": "Q9LMT0", "gene_name": "CDKD-3", "activity": [ { "ec_number": "2.7.11.22", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9LMT0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LMT0" } ] }, { "ec_number": "2.7.11.23", "activity": "[DNA-directed RNA polymerase] + ATP = phospho-[DNA-directed RNA polymerase] + ADP + H(+).", "evidence": [ { "id": "Q9LMT0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LMT0" } ] }, { "ec_number": "2.7.11.23", "activity": "", "evidence": [ { "id": "Q9LMT0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LMT0" } ] }, { "ec_number": "2.7.11.22", "activity": "", "evidence": [ { "id": "Q9LMT0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LMT0" } ] } ] }, { "uniprot_ac": "Q9LMT9", "gene_name": "WAKL13", "activity": [ { "ec_number": "2.7.11.-", "activity": "", "evidence": [ { "id": "Q9LMT9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LMT9" } ] } ] }, { "uniprot_ac": "Q9LN59", "gene_name": "WAKL11", "activity": [ { "ec_number": "2.7.11.-", "activity": "", "evidence": [ { "id": "Q9LN59", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LN59" } ] } ] }, { "uniprot_ac": "Q9LP24", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9LP24", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LP24" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9LP24", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LP24" } ] } ] }, { "uniprot_ac": "Q9LP51", "gene_name": "CIPK18", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9LP51", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LP51" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9LP51", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LP51" } ] } ] }, { "uniprot_ac": "Q9LPQ3", "gene_name": "MKK7", "activity": [ { "ec_number": "2.7.12.2", "activity": "L-tyrosyl-[protein] + ATP = O-phospho-L-tyrosyl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9LPQ3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LPQ3" } ] }, { "ec_number": "2.7.12.2", "activity": "", "evidence": [ { "id": "Q9LPQ3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LPQ3" } ] } ] }, { "uniprot_ac": "Q9LPT1", "gene_name": "PRK5", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9LPT1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LPT1" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9LPT1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LPT1" } ] } ] }, { "uniprot_ac": "Q9LPZ3", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9LPZ3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LPZ3" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9LPZ3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LPZ3" } ] } ] }, { "uniprot_ac": "Q9LPZ9", "gene_name": "SD113", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9LPZ9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LPZ9" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9LPZ9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LPZ9" } ] } ] }, { "uniprot_ac": "Q9LQ11", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9LQ11", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LQ11" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9LQ11", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LQ11" } ] } ] }, { "uniprot_ac": "Q9LQM8", "gene_name": "MKK10", "activity": [ { "ec_number": "2.7.12.2", "activity": "L-tyrosyl-[protein] + ATP = O-phospho-L-tyrosyl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9LQM8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LQM8" } ] }, { "ec_number": "2.7.12.2", "activity": "", "evidence": [ { "id": "Q9LQM8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LQM8" } ] } ] }, { "uniprot_ac": "Q9LQQ8", "gene_name": "PBL5", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9LQQ8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LQQ8" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9LQQ8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LQQ8" } ] } ] }, { "uniprot_ac": "Q9LQQ9", "gene_name": "MPK13", "activity": [ { "ec_number": "2.7.11.24", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9LQQ9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LQQ9" } ] }, { "ec_number": "2.7.11.24", "activity": "", "evidence": [ { "id": "Q9LQQ9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LQQ9" } ] } ] }, { "uniprot_ac": "Q9LRP3", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9LRP3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LRP3" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9LRP3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LRP3" } ] } ] }, { "uniprot_ac": "Q9LRY1", "gene_name": "PBL25", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9LRY1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LRY1" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9LRY1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LRY1" } ] } ] }, { "uniprot_ac": "Q9LS26", "gene_name": "BSK2", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9LS26", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LS26" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9LS26", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LS26" } ] } ] }, { "uniprot_ac": "Q9LS95", "gene_name": "PERK6", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9LS95", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LS95" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9LS95", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LS95" } ] } ] }, { "uniprot_ac": "Q9LSE1", "gene_name": "CDG1", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9LSE1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LSE1" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9LSE1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LSE1" } ] } ] }, { "uniprot_ac": "Q9LSF1", "gene_name": "OXI1", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9LSF1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LSF1" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9LSF1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LSF1" } ] } ] }, { "uniprot_ac": "Q9LSL5", "gene_name": "LECRK92", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9LSL5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LSL5" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9LSL5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LSL5" } ] } ] }, { "uniprot_ac": "Q9LSR8", "gene_name": "LECRK19", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9LSR8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LSR8" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9LSR8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LSR8" } ] } ] }, { "uniprot_ac": "Q9LSR9", "gene_name": "LECRK18", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9LSR9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LSR9" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9LSR9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LSR9" } ] } ] }, { "uniprot_ac": "Q9LSS0", "gene_name": "LECRK17", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9LSS0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LSS0" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9LSS0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LSS0" } ] } ] }, { "uniprot_ac": "Q9LSV3", "gene_name": "WAKL16", "activity": [ { "ec_number": "2.7.11.-", "activity": "", "evidence": [ { "id": "Q9LSV3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LSV3" } ] } ] }, { "uniprot_ac": "Q9LSX4", "gene_name": "CKL8", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9LSX4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LSX4" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9LSX4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LSX4" } ] } ] }, { "uniprot_ac": "Q9LT35", "gene_name": "NEK6", "activity": [ { "ec_number": "2.7.11.34", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9LT35", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LT35" } ] }, { "ec_number": "2.7.11.34", "activity": "", "evidence": [ { "id": "Q9LT35", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LT35" } ] } ] }, { "uniprot_ac": "Q9LT38", "gene_name": "UCNL", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9LT38", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LT38" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9LT38", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LT38" } ] } ] }, { "uniprot_ac": "Q9LT96", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9LT96", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LT96" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9LT96", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LT96" } ] } ] }, { "uniprot_ac": "Q9LTC0", "gene_name": "PBL19", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9LTC0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LTC0" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9LTC0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LTC0" } ] } ] }, { "uniprot_ac": "Q9LTW5", "gene_name": "AGC1-5", 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] } ] }, { "uniprot_ac": "Q9LUK3", "gene_name": "PAXL", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9LUK3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LUK3" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9LUK3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LUK3" } ] } ] }, { "uniprot_ac": "Q9LUL2", "gene_name": "WAG2", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9LUL2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LUL2" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9LUL2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LUL2" } ] } ] }, { "uniprot_ac": "Q9LUT0", "gene_name": "CARK1", "activity": [ { "ec_number": "2.7.11.1", 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O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9LY03", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LY03" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9LY03", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LY03" } ] } ] }, { "uniprot_ac": "Q9LY50", "gene_name": "CCR3", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9LY50", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LY50" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9LY50", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LY50" } ] } ] }, { "uniprot_ac": "Q9LYN8", "gene_name": "EMS1", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9LYN8", "database": "UniProtKB", "url": 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"id": "Q9LYS5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LYS5" } ] } ] }, { "uniprot_ac": "Q9LYX1", "gene_name": "LECRK82", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9LYX1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LYX1" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9LYX1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LYX1" } ] } ] }, { "uniprot_ac": "Q9LZF8", "gene_name": "PCRK2", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9LZF8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LZF8" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9LZF8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9LZF8" } ] } ] }, { 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"url": "https://www.uniprot.org/uniprotkb/Q9SF86" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9SF86", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SF86" } ] } ] }, { "uniprot_ac": "Q9SFB6", "gene_name": "MAP3KE2", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9SFB6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SFB6" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9SFB6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SFB6" } ] } ] }, { "uniprot_ac": "Q9SFT7", "gene_name": "PBL26", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9SFT7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SFT7" } ] }, { "ec_number": "2.7.11.1", "activity": "", 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"activity": "", "evidence": [ { "id": "Q9SN97", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SN97" } ] } ] }, { "uniprot_ac": "Q9SNA0", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9SNA0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SNA0" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9SNA0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SNA0" } ] } ] }, { "uniprot_ac": "Q9SNA3", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9SNA3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SNA3" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9SNA3", "database": "UniProtKB", "url": 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O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9SRH7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SRH7" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9SRH7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SRH7" } ] } ] }, { "uniprot_ac": "Q9SSA4", "gene_name": "CBC1", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9SSA4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SSA4" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9SSA4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SSA4" } ] } ] }, { "uniprot_ac": "Q9SSF8", "gene_name": "CPK30", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9SSF8", "database": "UniProtKB", "url": 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"ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9SXB8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SXB8" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9SXB8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SXB8" } ] } ] }, { "uniprot_ac": "Q9SY89", "gene_name": "", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", "evidence": [ { "id": "Q9SY89", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SY89" } ] }, { "ec_number": "2.7.11.1", "activity": "", "evidence": [ { "id": "Q9SY89", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SY89" } ] } ] }, { "uniprot_ac": "Q9SY91", "gene_name": "PBL15", "activity": [ { "ec_number": "2.7.11.1", "activity": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+).", 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J, Koo H L, Kremenetskaia I, Kurtz D B, Kwan A, Lam B, Langin-Hooper S, Lee A, Lee J M, Lenz C A, Li J H, Li Y, Lin X, Liu S X, Liu Z A, Luros J S, Maiti R, Marziali A, Militscher J, Miranda M, Nguyen M, Nierman W C, Osborne B I, Pai G, Peterson J, Pham P K, Rizzo M, Rooney T, Rowley D, Sakano H, Salzberg S L, Schwartz J R, Shinn P, Southwick A M, Sun H, Tallon L J, Tambunga G, Toriumi M J, Town C D, Utterback T, Van Aken S, Vaysberg M, Vysotskaia V S, Walker M, Wu D, Yu G, Fraser C M, Venter J C, Davis R W", "evidence": [ { "database": "UniProtKB", "id": "Q9SXA7", "url": "https://www.uniprot.org/uniprotkb/Q9SXA7" } ], "reference": [ { "type": "PubMed", "id": "11130712", "url": "https://glygen.org/publication/PubMed/11130712" } ] }, { "title": "Quantitative phosphoproteomics of the ataxia telangiectasia-mutated (ATM) and ataxia telangiectasia-mutated and rad3-related (ATR) dependent DNA damage response in Arabidopsis thaliana.", "journal": "Molecular & cellular proteomics : MCP", "date": "2015-03", "authors": "Roitinger Elisabeth, Hofer Manuel, K\u00f6cher Thomas, Pichler Peter, Novatchkova Maria, Yang Jianhua, Schl\u00f6gelhofer Peter, Mechtler Karl", "evidence": [ { "database": "iPTMnet", "id": "Q9SXA7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SXA7" } ], "reference": [ { "type": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9SXA7", "url": "https://www.uniprot.org/uniprotkb/Q9SXA7" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT1G11210", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT1G11210", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "response to oxidative stress", "id": "GO:0006979", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006979", "evidence": [ { "database": "UniProtKB", "id": "Q9SXA7", "url": "https://www.uniprot.org/uniprotkb/Q9SXA7" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 196, "end_pos": 198, "annotation": "n_glycosylation_sequon" }, { "start_pos": 210, "end_pos": 212, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "Q9SXA7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SXA7" }, { "id": "PF14364", "database": "Pfam", "url": 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Arabidopsis phosphoproteome profiling reveals novel chloroplast kinase substrates and phosphorylation networks.", "journal": "Plant Physiol.", "date": "2009", "authors": "Reiland Sonja, Messerli Ga\u00eblle, Baerenfaller Katja, Gerrits Bertran, Endler Anne, Grossmann Jonas, Gruissem Wilhelm, Baginsky Sacha", "evidence": [ { "database": "UniProtKB", "id": "Q9SXC7", "url": "https://www.uniprot.org/uniprotkb/Q9SXC7" }, { "database": "iPTMnet", "id": "Q9SXC7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SXC7" } ], "reference": [ { "type": "PubMed", "id": "19376835", "url": "https://glygen.org/publication/PubMed/19376835" } ] }, { "title": "Comparative phosphoproteome profiling reveals a function of the STN8 kinase in fine-tuning of cyclic electron flow (CEF).", "journal": "Proceedings of the National Academy of Sciences of the United States of America", "date": "2011-08-02", "authors": "Reiland Sonja, Finazzi Giovanni, Endler Anne, Willig Adrian, Baerenfaller Katja, Grossmann Jonas, Gerrits Bertran, Rutishauser Dorothea, Gruissem Wilhelm, Rochaix Jean-David, Baginsky Sacha", "evidence": [ { "database": "iPTMnet", "id": "Q9SXC7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SXC7" } ], "reference": [ { "type": "PubMed", "id": "21768351", "url": "https://glygen.org/publication/PubMed/21768351" } ] }, { "title": "A large-scale protein phosphorylation analysis reveals novel phosphorylation motifs and phosphoregulatory networks in Arabidopsis.", "journal": "Journal of proteomics", "date": "2013-01-14", "authors": "Wang Xu, Bian Yangyang, Cheng Kai, Gu Li-Fei, Ye Mingliang, Zou Hanfa, Sun Samuel Sai-Ming, He Jun-Xian", "evidence": [ { "database": "iPTMnet", "id": "Q9SXC7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SXC7" } ], "reference": [ { "type": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" } ] }, { "title": "Genetics and phosphoproteomics reveal a protein phosphorylation network in the abscisic acid signaling pathway in Arabidopsis thaliana.", "journal": "Science signaling", "date": "2013-04-09", "authors": "Umezawa Taishi, Sugiyama Naoyuki, Takahashi Fuminori, Anderson Jeffrey C, Ishihama Yasushi, Peck Scott C, Shinozaki Kazuo", "evidence": [ { "database": "iPTMnet", "id": "Q9SXC7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SXC7" } ], "reference": [ { "type": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" } ] }, { "title": "Quantitative measurement of phosphoproteome response to osmotic stress in arabidopsis based on Library-Assisted eXtracted Ion Chromatogram (LAXIC).", "journal": "Molecular & cellular proteomics : MCP", "date": "2013-08", "authors": "Xue Liang, Wang Pengcheng, Wang Lianshui, Renzi Emily, Radivojac Predrag, Tang Haixu, Arnold Randy, Zhu Jian-Kang, Tao W Andy", "evidence": [ { "database": "iPTMnet", "id": "Q9SXC7", "url": 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phosphoproteins and putative substrates of constitutive triple response 1 kinase.", "journal": "Molecular & cellular proteomics : MCP", "date": "2013-12", "authors": "Yang Zhu, Guo Guangyu, Zhang Manyu, Liu Claire Y, Hu Qin, Lam Henry, Cheng Han, Xue Yu, Li Jiayang, Li Ning", "evidence": [ { "database": "iPTMnet", "id": "Q9SXC7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SXC7" } ], "reference": [ { "type": "PubMed", "id": "24043427", "url": "https://glygen.org/publication/PubMed/24043427" } ] }, { "title": "Identification of novel PAMP-triggered phosphorylation and dephosphorylation events in Arabidopsis thaliana by quantitative phosphoproteomic analysis.", "journal": "Journal of proteome research", "date": "2014-04-04", "authors": "Rayapuram Naganand, Bonhomme Ludovic, Bigeard Jean, Haddadou Kahina, Przybylski C\u00e9dric, Hirt Heribert, Pflieger Delphine", "evidence": [ { "database": "iPTMnet", "id": "Q9SXC7", "url": 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"Protein Classification" ] }, { "id": "842547", "url": "https://www.ncbi.nlm.nih.gov/gene/842547", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR027923", "url": "https://www.ebi.ac.uk/interpro/entry/IPR027923", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036312", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036312", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR051636", "url": "https://www.ebi.ac.uk/interpro/entry/IPR051636", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT1G62500", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT1G62500", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "MPPSIAC", "url": "https://omabrowser.org/oma/group/MPPSIAC/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR31731", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31731", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF14547", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF14547", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_176439", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_176439", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT1G62500", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT1G62500", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9SXE7", "url": "https://www.uniprot.org/uniprotkb/Q9SXE7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9SXE7-1", "url": "https://www.uniprot.org/uniprotkb/Q9SXE7-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MGSRVLASFFVFLIFTVITLPPTIQACTPCTRPHPPVPKPPQHGGGGGGGSKPPPHHGGKGGGKPPPHGGKGGGPPHHGGGGGGGGKSPPVVRPPPVVVRPPPIIRPPPVVYPPPIVRPPPITRPPIIIPPIQPPPVTTPPGLLPPITTPPGLLPPVTTPPGLLPPVTTPPGLLPPIINPPPVTVPPPSSGYPPYGPPSGGGGGGGGKQPTCPINALKLGACVDVLGGLIHIGLGNPVENVCCPVLQGLLELEAAVCLCTTIRLKLLNLNIFIPLALQALITCGINPPSGFVCPPLT", "length": 297, "header": "tr|Q9SXE7-1|Q9SXE7_ARATH Isoform 1 of Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein OS=Arabidopsis thaliana OX=3702 GN=DEG27 PE=1 SV=1 CANONICAL=Q9SXE7-1" }, "isoforms": [ { "isoform_ac": "Q9SXE7-1", "url": "https://www.uniprot.org/uniprotkb/Q9SXE7/entry", "sequence": { "sequence": "MGSRVLASFFVFLIFTVITLPPTIQACTPCTRPHPPVPKPPQHGGGGGGGSKPPPHHGGKGGGKPPPHGGKGGGPPHHGGGGGGGGKSPPVVRPPPVVVRPPPIIRPPPVVYPPPIVRPPPITRPPIIIPPIQPPPVTTPPGLLPPITTPPGLLPPVTTPPGLLPPVTTPPGLLPPIINPPPVTVPPPSSGYPPYGPPSGGGGGGGGKQPTCPINALKLGACVDVLGGLIHIGLGNPVENVCCPVLQGLLELEAAVCLCTTIRLKLLNLNIFIPLALQALITCGINPPSGFVCPPLT", "length": 297, "header": "tr|Q9SXE7-1|Q9SXE7_ARATH Isoform 1 of Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein OS=Arabidopsis thaliana OX=3702 GN=DEG27 PE=1 SV=1 CANONICAL=Q9SXE7-1" }, "locus": { "chromosome": "1", "start_pos": 23131928, "end_pos": 23133507, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT1G62500.1", "url": "https://www.ensemblgenomes.org/id/AT1G62500.1" }, { "database": "Ensembl Peptide", "id": "AT1G62500.1", "url": "https://www.ensemblgenomes.org/id/AT1G62500.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Theologis A, Ecker J R, Palm C J, Federspiel N A, Kaul S, White O, Alonso J, Altafi H, Araujo R, Bowman C L, Brooks S Y, Buehler E, Chan A, Chao Q, Chen H, Cheuk R F, Chin C W, Chung M K, Conn L, Conway A B, Conway A R, Creasy T H, Dewar K, Dunn P, Etgu P, Feldblyum T V, Feng J, Fong B, Fujii C Y, Gill J E, Goldsmith A D, Haas B, Hansen N F, Hughes B, Huizar L, Hunter J L, Jenkins J, Johnson-Hopson C, Khan S, Khaykin E, Kim C J, Koo H L, Kremenetskaia I, Kurtz D B, Kwan A, Lam B, Langin-Hooper S, Lee A, Lee J M, Lenz C A, Li J H, Li Y, Lin X, Liu S X, Liu Z A, Luros J S, Maiti R, Marziali A, Militscher J, Miranda M, Nguyen M, Nierman W C, Osborne B I, Pai G, Peterson J, Pham P K, Rizzo M, Rooney T, Rowley D, Sakano H, Salzberg S L, Schwartz J R, Shinn P, Southwick A M, Sun H, Tallon L J, Tambunga G, Toriumi M J, Town C D, Utterback T, Van Aken S, Vaysberg M, Vysotskaia V S, Walker M, Wu D, Yu G, Fraser C M, Venter J C, Davis R W", "evidence": [ { "database": "UniProtKB", "id": "Q9SXE7", "url": "https://www.uniprot.org/uniprotkb/Q9SXE7" } ], "reference": [ { "type": "PubMed", "id": "11130712", "url": "https://glygen.org/publication/PubMed/11130712" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9SXE7", "url": "https://www.uniprot.org/uniprotkb/Q9SXE7" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT1G62500", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT1G62500", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": {}, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "Q9SXE7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SXE7" }, { "id": "PF14547", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF14547" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Hydrophobic seed protein", "eco_id": "ECO_0000259", "start_pos": 211, "end_pos": 294, "start_aa": "Thr", "end_aa": "Pro", "glycosite_overlap": [] } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": 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"database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR038538", "url": "https://www.ebi.ac.uk/interpro/entry/IPR038538", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT1G62490", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT1G62490", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "PTHR13068", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR13068", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR13068:SF161", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR13068:SF161", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF02536", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF02536", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_176438", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_176438", "database": "RefSeq", "categories": [ 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Liu Z A, Luros J S, Maiti R, Marziali A, Militscher J, Miranda M, Nguyen M, Nierman W C, Osborne B I, Pai G, Peterson J, Pham P K, Rizzo M, Rooney T, Rowley D, Sakano H, Salzberg S L, Schwartz J R, Shinn P, Southwick A M, Sun H, Tallon L J, Tambunga G, Toriumi M J, Town C D, Utterback T, Van Aken S, Vaysberg M, Vysotskaia V S, Walker M, Wu D, Yu G, Fraser C M, Venter J C, Davis R W", "evidence": [ { "database": "UniProtKB", "id": "Q9SXE8", "url": "https://www.uniprot.org/uniprotkb/Q9SXE8" } ], "reference": [ { "type": "PubMed", "id": "11130712", "url": "https://glygen.org/publication/PubMed/11130712" } ] }, { "title": "Sucrose-induced receptor kinase SIRK1 regulates a plasma membrane aquaporin in Arabidopsis.", "journal": "Molecular & cellular proteomics : MCP", "date": "2013-10", "authors": "Wu Xu Na, Sanchez Rodriguez Clara, Pertl-Obermeyer Heidi, Obermeyer Gerhard, Schulze Waltraud X", "evidence": [ { "database": "iPTMnet", "id": "Q9SXE8", "url": 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"MAASVETPSPNHTNNEGTRLNMVSATSFDSSSPSVSPSSDKRLWSNVRNRVDVLLEENSKNHKPVTNTIAIESERSKRFKNDSMLLLKGFDSVSHTLSLLSSNLDNALQGVRELAKPPSYSEILHSNLKADQIQRQQKEEDEEEEESKGKKRKHESDVEQTEDSSNEEEKRPKERKIMKKAKNIAISMAAKANSLARELKTIKSDLSFIQERCGLLEEENKRLRDGFVKGVRPEEDDLVRLQLEVLLAEKARLANENANLVRENQCLHQMVEYHQITSQDLSPSYEQVVQGFCLDFSSPLPQYDDEEEEHETRARDVSKALNESFEKAEEEQY", "length": 333, "header": "tr|Q9SY05-1|Q9SY05_ARATH Isoform 1 of GRIP/coiled-coil protein OS=Arabidopsis thaliana OX=3702 GN=MADA1 PE=1 SV=1 CANONICAL=Q9SY05-1" }, "isoforms": [ { "isoform_ac": "Q9SY05-1", "url": "https://www.uniprot.org/uniprotkb/Q9SY05/entry", "sequence": { "sequence": "MAASVETPSPNHTNNEGTRLNMVSATSFDSSSPSVSPSSDKRLWSNVRNRVDVLLEENSKNHKPVTNTIAIESERSKRFKNDSMLLLKGFDSVSHTLSLLSSNLDNALQGVRELAKPPSYSEILHSNLKADQIQRQQKEEDEEEEESKGKKRKHESDVEQTEDSSNEEEKRPKERKIMKKAKNIAISMAAKANSLARELKTIKSDLSFIQERCGLLEEENKRLRDGFVKGVRPEEDDLVRLQLEVLLAEKARLANENANLVRENQCLHQMVEYHQITSQDLSPSYEQVVQGFCLDFSSPLPQYDDEEEEHETRARDVSKALNESFEKAEEEQY", "length": 333, "header": "tr|Q9SY05-1|Q9SY05_ARATH Isoform 1 of GRIP/coiled-coil protein OS=Arabidopsis thaliana OX=3702 GN=MADA1 PE=1 SV=1 CANONICAL=Q9SY05-1" }, "locus": { "chromosome": "4", "start_pos": 1249971, "end_pos": 1251867, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT4G02800.1", "url": "https://www.ensemblgenomes.org/id/AT4G02800.1" }, { "database": "Ensembl Peptide", "id": "AT4G02800.1", "url": "https://www.ensemblgenomes.org/id/AT4G02800.1" } ] } } ], "glycosylation": [], "phosphorylation": [ { "start_pos": 32, "end_pos": 32, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SY05", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SY05" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" } ], "site_lbl": "Ser32" }, { "start_pos": 34, "end_pos": 34, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": 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Grivell L, Rieger M, Weichselgartner M, de Simone V, Obermaier B, Mache R, M\u00fcller M, Kreis M, Delseny M, Puigdomenech P, Watson M, Schmidtheini T, Reichert B, Portatelle D, Perez-Alonso M, Boutry M, Bancroft I, Vos P, Hoheisel J, Zimmermann W, Wedler H, Ridley P, Langham S A, McCullagh B, Bilham L, Robben J, Van der Schueren J, Grymonprez B, Chuang Y J, Vandenbussche F, Braeken M, Weltjens I, Voet M, Bastiaens I, Aert R, Defoor E, Weitzenegger T, Bothe G, Ramsperger U, Hilbert H, Braun M, Holzer E, Brandt A, Peters S, van Staveren M, Dirske W, Mooijman P, Klein Lankhorst R, Rose M, Hauf J, K\u00f6tter P, Berneiser S, Hempel S, Feldpausch M, Lamberth S, Van den Daele H, De Keyser A, Buysshaert C, Gielen J, Villarroel R, De Clercq R, Van Montagu M, Rogers J, Cronin A, Quail M, Bray-Allen S, Clark L, Doggett J, Hall S, Kay M, Lennard N, McLay K, Mayes R, Pettett A, Rajandream M A, Lyne M, Benes V, Rechmann S, Borkova D, Bl\u00f6cker H, Scharfe M, Grimm M, L\u00f6hnert T H, Dose S, de Haan M, Maarse A, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Fartmann B, Granderath K, Dauner D, Herzl A, Neumann S, Argiriou A, Vitale D, Liguori R, Piravandi E, Massenet O, Quigley F, Clabauld G, M\u00fcndlein A, Felber R, Schnabl S, Hiller R, Schmidt W, Lecharny A, Aubourg S, Chefdor F, Cooke R, Berger C, Montfort A, Casacuberta E, Gibbons T, Weber N, Vandenbol M, Bargues M, Terol J, Torres A, Perez-Perez A, Purnelle B, Bent E, Johnson S, Tacon D, Jesse T, Heijnen L, Schwarz S, Scholler P, Heber S, Francs P, Bielke C, Frishman D, Haase D, Lemcke K, Mewes H W, Stocker S, Zaccaria P, Bevan M, Wilson R K, de la Bastide M, Habermann K, Parnell L, Dedhia N, Gnoj L, Schutz K, Huang E, Spiegel L, Sehkon M, Murray J, Sheet P, Cordes M, Abu-Threideh J, Stoneking T, Kalicki J, Graves T, Harmon G, Edwards J, Latreille P, Courtney L, Cloud J, Abbott A, Scott K, Johnson D, Minx P, Bentley D, Fulton B, Miller N, Greco T, Kemp K, Kramer J, Fulton L, Mardis E, Dante M, Pepin K, Hillier L, Nelson J, Spieth J, Ryan E, Andrews S, Geisel C, Layman D, Du H, Ali J, Berghoff A, Jones K, Drone K, Cotton M, Joshu C, Antonoiu B, Zidanic M, Strong C, Sun H, Lamar B, Yordan C, Ma P, Zhong J, Preston R, Vil D, Shekher M, Matero A, Shah R, Swaby I K, O'Shaughnessy A, Rodriguez M, Hoffmann J, Till S, Granat S, Shohdy N, Hasegawa A, Hameed A, Lodhi M, Johnson A, Chen E, Marra M, Martienssen R, McCombie W R", "evidence": [ { "database": "UniProtKB", "id": "Q9SY05", "url": "https://www.uniprot.org/uniprotkb/Q9SY05" } ], "reference": [ { "type": "PubMed", "id": "10617198", "url": "https://glygen.org/publication/PubMed/10617198" } ] }, { "title": "Large-scale comparative phosphoproteomics identifies conserved phosphorylation sites in plants.", "journal": "Plant physiology", "date": "2010-07", "authors": "Nakagami Hirofumi, Sugiyama Naoyuki, Mochida Keiichi, Daudi Arsalan, Yoshida Yuko, Toyoda Tetsuro, Tomita Masaru, Ishihama Yasushi, Shirasu Ken", "evidence": [ { "database": "iPTMnet", 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Schwartz J R, Shinn P, Southwick A M, Sun H, Tallon L J, Tambunga G, Toriumi M J, Town C D, Utterback T, Van Aken S, Vaysberg M, Vysotskaia V S, Walker M, Wu D, Yu G, Fraser C M, Venter J C, Davis R W", "evidence": [ { "database": "UniProtKB", "id": "Q9SY17", "url": "https://www.uniprot.org/uniprotkb/Q9SY17" } ], "reference": [ { "type": "PubMed", "id": "11130712", "url": "https://glygen.org/publication/PubMed/11130712" } ] }, { "title": "Nitrate and ammonium lead to distinct global dynamic phosphorylation patterns when resupplied to nitrogen-starved Arabidopsis seedlings.", "journal": "The Plant journal : for cell and molecular biology", "date": "2012-03", "authors": "Engelsberger Wolfgang R, Schulze Waltraud X", "evidence": [ { "database": "iPTMnet", "id": "Q9SY17", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SY17" } ], "reference": [ { "type": "PubMed", "id": "22060019", "url": "https://glygen.org/publication/PubMed/22060019" } ] }, { "title": "Araport11: a 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"MTIEELVQQPGRTLLRRLHPKRLEGSTWFGFSKNGIFKSILRMLHGMLKHPYPTYNDMPRNNQEIWFRTFALGSCPHTLWPCWVSQVCCIKIFRPHEHLERKVGSRRVSKRLEPRHMASLQRVLSVAGDCLYRENQLKISEKRMWWQRYDGAQCGFDELLKPYKRIENNGGVEPDFVEIIEDTHTNKKAGLIQDGYIAGLVETQLPQNDDGSSPSNVQTREKINRMVFEEIPPNRGRVIELGSLNQSTRYFYAGPSRDSDIFAELEEKDKEILVLKEQNMKILDFMRSKFSDFPNDPLEIRTTSVTRRKYIVGNHSGITLWGNRQKNIPTNFQQRSDAMPVNNIR", "length": 345, "header": "tr|Q9SY52-1|Q9SY52_ARATH Isoform 1 of Uncharacterized protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9SY52-1" }, "isoforms": [ { "isoform_ac": "Q9SY52-1", "url": "https://www.uniprot.org/uniprotkb/Q9SY52/entry", "sequence": { "sequence": "MTIEELVQQPGRTLLRRLHPKRLEGSTWFGFSKNGIFKSILRMLHGMLKHPYPTYNDMPRNNQEIWFRTFALGSCPHTLWPCWVSQVCCIKIFRPHEHLERKVGSRRVSKRLEPRHMASLQRVLSVAGDCLYRENQLKISEKRMWWQRYDGAQCGFDELLKPYKRIENNGGVEPDFVEIIEDTHTNKKAGLIQDGYIAGLVETQLPQNDDGSSPSNVQTREKINRMVFEEIPPNRGRVIELGSLNQSTRYFYAGPSRDSDIFAELEEKDKEILVLKEQNMKILDFMRSKFSDFPNDPLEIRTTSVTRRKYIVGNHSGITLWGNRQKNIPTNFQQRSDAMPVNNIR", "length": 345, "header": "tr|Q9SY52-1|Q9SY52_ARATH Isoform 1 of Uncharacterized protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9SY52-1" }, "locus": { "chromosome": "4", "start_pos": 1661992, "end_pos": 1663515, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT4G03740.1", "url": "https://www.ensemblgenomes.org/id/AT4G03740.1" }, { "database": "Ensembl Peptide", "id": "AT4G03740.1", "url": "https://www.ensemblgenomes.org/id/AT4G03740.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "1999", "authors": "Mayer K, Sch\u00fcller C, Wambutt R, Murphy G, Volckaert G, Pohl T, D\u00fcsterh\u00f6ft A, Stiekema W, Entian K D, Terryn N, Harris B, Ansorge W, Brandt P, Grivell L, Rieger M, Weichselgartner M, de Simone V, Obermaier B, Mache R, M\u00fcller M, Kreis M, Delseny M, Puigdomenech P, Watson M, Schmidtheini T, Reichert B, Portatelle D, Perez-Alonso M, Boutry M, Bancroft I, Vos P, Hoheisel J, Zimmermann W, Wedler H, Ridley P, Langham S A, McCullagh B, Bilham L, Robben J, Van der Schueren J, Grymonprez B, Chuang Y J, Vandenbussche F, Braeken M, Weltjens I, Voet M, Bastiaens I, Aert R, Defoor E, Weitzenegger T, Bothe G, Ramsperger U, Hilbert H, Braun M, Holzer E, Brandt A, Peters S, van Staveren M, Dirske W, Mooijman P, Klein Lankhorst R, Rose M, Hauf J, K\u00f6tter P, Berneiser S, Hempel S, Feldpausch M, Lamberth S, Van den Daele H, De Keyser A, Buysshaert C, Gielen J, Villarroel R, De Clercq R, Van Montagu M, Rogers J, Cronin A, Quail M, Bray-Allen S, Clark L, Doggett J, Hall S, Kay M, Lennard N, McLay K, Mayes R, Pettett A, Rajandream M A, Lyne M, Benes V, Rechmann S, Borkova D, Bl\u00f6cker H, Scharfe M, Grimm M, L\u00f6hnert T H, Dose S, de Haan M, Maarse A, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Fartmann B, Granderath K, Dauner D, Herzl A, Neumann S, Argiriou A, Vitale D, Liguori R, Piravandi E, Massenet O, Quigley F, Clabauld G, M\u00fcndlein A, Felber R, Schnabl S, Hiller R, Schmidt W, Lecharny A, Aubourg S, Chefdor F, Cooke R, Berger C, Montfort A, Casacuberta E, Gibbons T, Weber N, Vandenbol M, Bargues M, Terol J, Torres A, Perez-Perez A, Purnelle B, Bent E, Johnson S, Tacon D, Jesse T, Heijnen L, Schwarz S, Scholler P, Heber S, Francs P, Bielke C, Frishman D, Haase D, Lemcke K, Mewes H W, Stocker S, Zaccaria P, Bevan M, Wilson R K, de la Bastide M, Habermann K, Parnell L, Dedhia N, Gnoj L, Schutz K, Huang E, Spiegel L, Sehkon M, Murray J, Sheet P, Cordes M, Abu-Threideh J, Stoneking T, Kalicki J, Graves T, Harmon G, Edwards J, Latreille P, Courtney L, Cloud J, Abbott A, Scott K, Johnson D, Minx P, Bentley D, Fulton B, Miller N, Greco T, Kemp K, Kramer J, Fulton L, Mardis E, Dante M, Pepin K, Hillier L, Nelson J, Spieth J, Ryan E, Andrews S, Geisel C, Layman D, Du H, Ali J, Berghoff A, Jones K, Drone K, Cotton M, Joshu C, Antonoiu B, Zidanic M, Strong C, Sun H, Lamar B, Yordan C, Ma P, Zhong J, Preston R, Vil D, Shekher M, Matero A, Shah R, Swaby I K, O'Shaughnessy A, Rodriguez M, Hoffmann J, Till S, Granat S, Shohdy N, Hasegawa A, Hameed A, Lodhi M, Johnson A, Chen E, Marra M, Martienssen R, McCombie W R", "evidence": [ { "database": "UniProtKB", "id": "Q9SY52", "url": "https://www.uniprot.org/uniprotkb/Q9SY52" } ], "reference": [ { "type": "PubMed", "id": "10617198", "url": "https://glygen.org/publication/PubMed/10617198" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9SY52", "url": "https://www.uniprot.org/uniprotkb/Q9SY52" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" 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reveals the effectors of abscisic acid action.", "journal": "Proceedings of the National Academy of Sciences of the United States of America", "date": "2013-07-02", "authors": "Wang Pengcheng, Xue Liang, Batelli Giorgia, Lee Shinyoung, Hou Yueh-Ju, Van Oosten Michael J, Zhang Huiming, Tao W Andy, Zhu Jian-Kang", "evidence": [ { "database": "iPTMnet", "id": "Q9SY56", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SY56" } ], "reference": [ { "type": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" } ] }, { "title": "Quantitative phosphoproteomics of the ataxia telangiectasia-mutated (ATM) and ataxia telangiectasia-mutated and rad3-related (ATR) dependent DNA damage response in Arabidopsis thaliana.", "journal": "Molecular & cellular proteomics : MCP", "date": "2015-03", "authors": "Roitinger Elisabeth, Hofer Manuel, K\u00f6cher Thomas, Pichler Peter, Novatchkova Maria, Yang Jianhua, Schl\u00f6gelhofer Peter, Mechtler Karl", "evidence": 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superfamily of phloem lectins (phloem protein 2) in angiosperms.", "journal": "Plant Physiol.", "date": "2003", "authors": "Dinant Sylvie, Clark Anna M, Zhu Yanmin, Vilaine Fran\u00e7oise, Palauqui Jean-Christophe, Kusiak Chantal, Thompson Gary A", "evidence": [ { "database": "UniProtKB", "id": "Q9SY57", "url": "https://www.uniprot.org/uniprotkb/Q9SY57" } ], "reference": [ { "type": "PubMed", "id": "12529520", "url": "https://glygen.org/publication/PubMed/12529520" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9SY57", "url": "https://www.uniprot.org/uniprotkb/Q9SY57" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": 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Rowley D, Sakano H, Salzberg S L, Schwartz J R, Shinn P, Southwick A M, Sun H, Tallon L J, Tambunga G, Toriumi M J, Town C D, Utterback T, Van Aken S, Vaysberg M, Vysotskaia V S, Walker M, Wu D, Yu G, Fraser C M, Venter J C, Davis R W", "evidence": [ { "database": "UniProtKB", "id": "Q9SY76", "url": "https://www.uniprot.org/uniprotkb/Q9SY76" } ], "reference": [ { "type": "PubMed", "id": "11130712", "url": "https://glygen.org/publication/PubMed/11130712" } ] }, { "title": "Quantitative phosphoproteomics of the ataxia telangiectasia-mutated (ATM) and ataxia telangiectasia-mutated and rad3-related (ATR) dependent DNA damage response in Arabidopsis thaliana.", "journal": "Molecular & cellular proteomics : MCP", "date": "2015-03", "authors": "Roitinger Elisabeth, Hofer Manuel, K\u00f6cher Thomas, Pichler Peter, Novatchkova Maria, Yang Jianhua, Schl\u00f6gelhofer Peter, Mechtler Karl", "evidence": [ { "database": "iPTMnet", "id": "Q9SY76", "url": 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"iPTMnet", "id": "Q9SY76", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SY76" } ], "reference": [ { "type": "PubMed", "id": "29654922", "url": "https://glygen.org/publication/PubMed/29654922" } ] } ], "pathway": [ { "id": "ath:AT1G10340", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT1G10340", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "Q9SY76", "url": "https://www.uniprot.org/uniprotkb/Q9SY76" } ], "pmid": "" }, { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "Q9SY76", "url": "https://www.uniprot.org/uniprotkb/Q9SY76" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 105, 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"https://www.ebi.ac.uk/interpro/entry/IPR051339", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT1G10350", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT1G10350", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "QKNGNVK", "url": "https://omabrowser.org/oma/group/QKNGNVK/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "Q9SY77", "url": "https://www.orthodb.org/?gene=Q9SY77", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR24078", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24078", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR24078:SF565", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24078:SF565", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00226", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00226", "database": "Pfam", 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"MGVDYYNVLKVNRNANEDDLKKSYRRMAMKWHPDKNPTSKKEAEAKFKQISEAYDVLSDPQRRQIYDQYGEEGLKSTDLPTAAETAAHQQQRSYSSSNSEFRYYPRDAEDIFAEFFGESGDAFGGGSSGRTRGDGGDGGGRRFKSAEAGSQANRKTPPTNKKTTPPANRKAPAIESKLACTLEELYKGAKKKMRISRVVPDDFGKPKTVQEILKIDIKPGWKKGTKITFPEKGNQEPGVTPADLIFVVDEKPHSVFKRDGNDLILEKKVSLIDALTGLTISVTTLDGRSLTIPVLDIVKPGQEIVIPNEGMPTKDPLKRGDLRVTFEILFPSRLTSEQKNDLKRVLGGS", "length": 349, "header": "tr|Q9SY77-1|Q9SY77_ARATH Isoform 1 of DNAJ heat shock family protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SY77-1" }, "isoforms": [ { "isoform_ac": "Q9SY77-1", "url": "https://www.uniprot.org/uniprotkb/Q9SY77/entry", "sequence": { "sequence": "MGVDYYNVLKVNRNANEDDLKKSYRRMAMKWHPDKNPTSKKEAEAKFKQISEAYDVLSDPQRRQIYDQYGEEGLKSTDLPTAAETAAHQQQRSYSSSNSEFRYYPRDAEDIFAEFFGESGDAFGGGSSGRTRGDGGDGGGRRFKSAEAGSQANRKTPPTNKKTTPPANRKAPAIESKLACTLEELYKGAKKKMRISRVVPDDFGKPKTVQEILKIDIKPGWKKGTKITFPEKGNQEPGVTPADLIFVVDEKPHSVFKRDGNDLILEKKVSLIDALTGLTISVTTLDGRSLTIPVLDIVKPGQEIVIPNEGMPTKDPLKRGDLRVTFEILFPSRLTSEQKNDLKRVLGGS", "length": 349, "header": "tr|Q9SY77-1|Q9SY77_ARATH Isoform 1 of DNAJ heat shock family protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SY77-1" }, "locus": { "chromosome": "1", "start_pos": 3392943, "end_pos": 3395181, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT1G10350.1", "url": "https://www.ensemblgenomes.org/id/AT1G10350.1" }, { "database": "Ensembl Peptide", "id": "AT1G10350.1", "url": "https://www.ensemblgenomes.org/id/AT1G10350.1" } ] } } ], "glycosylation": [], "phosphorylation": [ { "start_pos": 164, "end_pos": 164, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Thr", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SY77", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SY77" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ], "site_lbl": "Thr164" }, { "start_pos": 66, "end_pos": 66, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Tyr", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SY77", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SY77" } ], "site_lbl": "Tyr66" } ], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Theologis A, Ecker J R, Palm C J, Federspiel N A, Kaul S, White O, Alonso J, Altafi H, Araujo R, Bowman C L, Brooks S Y, Buehler E, Chan A, Chao Q, Chen H, Cheuk R F, Chin C W, Chung M K, Conn L, Conway A B, Conway A R, Creasy T H, Dewar K, Dunn P, Etgu P, Feldblyum T V, Feng J, Fong B, Fujii C Y, Gill J E, Goldsmith A D, Haas B, Hansen N F, Hughes B, Huizar L, Hunter J L, Jenkins J, Johnson-Hopson C, Khan S, Khaykin E, Kim C J, Koo H L, Kremenetskaia I, Kurtz D B, Kwan A, Lam B, Langin-Hooper S, Lee A, Lee J M, Lenz C A, Li J H, Li Y, Lin X, Liu S X, Liu Z A, Luros J S, Maiti R, Marziali A, Militscher J, Miranda M, Nguyen M, Nierman W C, Osborne B I, Pai G, Peterson J, Pham P K, Rizzo M, Rooney T, Rowley D, Sakano H, Salzberg S L, Schwartz J R, Shinn P, Southwick A M, Sun H, Tallon L J, Tambunga G, Toriumi M J, Town C D, Utterback T, Van Aken S, Vaysberg M, Vysotskaia V S, Walker M, Wu D, Yu G, Fraser C M, Venter J C, Davis R W", "evidence": [ { "database": "UniProtKB", "id": "Q9SY77", "url": "https://www.uniprot.org/uniprotkb/Q9SY77" } ], "reference": [ { "type": "PubMed", "id": "11130712", "url": "https://glygen.org/publication/PubMed/11130712" } ] }, { "title": "Quantitative phosphoproteomics of the ataxia telangiectasia-mutated (ATM) and ataxia telangiectasia-mutated and rad3-related (ATR) dependent DNA damage response in Arabidopsis thaliana.", "journal": "Molecular & cellular proteomics : MCP", "date": "2015-03", "authors": "Roitinger Elisabeth, Hofer Manuel, K\u00f6cher Thomas, Pichler Peter, Novatchkova Maria, Yang Jianhua, Schl\u00f6gelhofer Peter, Mechtler Karl", "evidence": [ { "database": "iPTMnet", "id": "Q9SY77", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SY77" } ], "reference": [ { "type": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9SY77", "url": "https://www.uniprot.org/uniprotkb/Q9SY77" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT1G10350", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT1G10350", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 2, "go_terms": [ 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}, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "protein folding", "id": "GO:0006457", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006457", "evidence": [ { "database": "UniProtKB", "id": "Q9SY77", "url": "https://www.uniprot.org/uniprotkb/Q9SY77" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "Q9SY77", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SY77" }, { "id": "PS50076", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50076" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "J", "eco_id": "ECO_0000259", "start_pos": 4, "end_pos": 70, "start_aa": "Asp", "end_aa": "Gly", "glycosite_overlap": [] } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], 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{ "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 2 }, { "field": "total_sites", "count": 2 } ], "sort_fields": [ "start_pos", "end_pos", "kinase_uniprot_canonical_ac", "kinase_gene_name", "residue", "comment", "site_lbl" ] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 3 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "Q9SY90-1", "uniprot_ac": "Q9SY90", "uniprot_id": "Q9SY90_ARATH", "mass": { "chemical_mass": 48773.0, "monoisotopic_mass": 48773.0 }, "refseq": {}, "gene_names": [ { "name": "T25B24.5", "type": "synonym", "evidence": [ { "id": "Q9SY90", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SY90" } ] }, { "name": "T25B24_5", "type": "synonym", "evidence": [ { "id": "Q9SY90", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SY90" } ] } ], "protein_names": [ { "name": 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Y, Gill J E, Goldsmith A D, Haas B, Hansen N F, Hughes B, Huizar L, Hunter J L, Jenkins J, Johnson-Hopson C, Khan S, Khaykin E, Kim C J, Koo H L, Kremenetskaia I, Kurtz D B, Kwan A, Lam B, Langin-Hooper S, Lee A, Lee J M, Lenz C A, Li J H, Li Y, Lin X, Liu S X, Liu Z A, Luros J S, Maiti R, Marziali A, Militscher J, Miranda M, Nguyen M, Nierman W C, Osborne B I, Pai G, Peterson J, Pham P K, Rizzo M, Rooney T, Rowley D, Sakano H, Salzberg S L, Schwartz J R, Shinn P, Southwick A M, Sun H, Tallon L J, Tambunga G, Toriumi M J, Town C D, Utterback T, Van Aken S, Vaysberg M, Vysotskaia V S, Walker M, Wu D, Yu G, Fraser C M, Venter J C, Davis R W", "evidence": [ { "database": "UniProtKB", "id": "Q9SYF1", "url": "https://www.uniprot.org/uniprotkb/Q9SYF1" } ], "reference": [ { "type": "PubMed", "id": "11130712", "url": "https://glygen.org/publication/PubMed/11130712" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", 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Weitzenegger T, Bothe G, Ramsperger U, Hilbert H, Braun M, Holzer E, Brandt A, Peters S, van Staveren M, Dirske W, Mooijman P, Klein Lankhorst R, Rose M, Hauf J, K\u00f6tter P, Berneiser S, Hempel S, Feldpausch M, Lamberth S, Van den Daele H, De Keyser A, Buysshaert C, Gielen J, Villarroel R, De Clercq R, Van Montagu M, Rogers J, Cronin A, Quail M, Bray-Allen S, Clark L, Doggett J, Hall S, Kay M, Lennard N, McLay K, Mayes R, Pettett A, Rajandream M A, Lyne M, Benes V, Rechmann S, Borkova D, Bl\u00f6cker H, Scharfe M, Grimm M, L\u00f6hnert T H, Dose S, de Haan M, Maarse A, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Fartmann B, Granderath K, Dauner D, Herzl A, Neumann S, Argiriou A, Vitale D, Liguori R, Piravandi E, Massenet O, Quigley F, Clabauld G, M\u00fcndlein A, Felber R, Schnabl S, Hiller R, Schmidt W, Lecharny A, Aubourg S, Chefdor F, Cooke R, Berger C, Montfort A, Casacuberta E, Gibbons T, Weber N, Vandenbol M, Bargues M, Terol J, Torres A, Perez-Perez A, Purnelle B, 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"header": "sp|Q9SYK1-1|PPR11_ARATH Isoform 1 of Pentatricopeptide repeat-containing protein At1g05600 OS=Arabidopsis thaliana OX=3702 GN= PE=2 SV=1 CANONICAL=Q9SYK1-1" }, "isoforms": [ { "isoform_ac": "Q9SYK1-1", "url": "https://www.uniprot.org/uniprotkb/Q9SYK1/entry#Q9SYK1-1", "sequence": { "sequence": "MSVVRWPRVLTPSLLSQILKKQKNPVTALKLFEEAKERFPSYGHNGSVYATMIDILGKSNRVLEMKYVIERMKEDSCECKDSVFASVIRTFSRAGRLEDAISLFKSLHEFNCVNWSLSFDTLLQEMVKESELEAACHIFRKYCYGWEVNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGHWESSSEGIERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLEEMVSQDMVPESSVWKALAESVCFCAIDVVEILEHLISSKR", "length": 504, "header": "sp|Q9SYK1-1|PPR11_ARATH Isoform 1 of Pentatricopeptide repeat-containing protein At1g05600 OS=Arabidopsis thaliana OX=3702 GN= PE=2 SV=1 CANONICAL=Q9SYK1-1" }, "locus": { "chromosome": "1", "start_pos": 1671916, "end_pos": 1673847, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT1G05600.1", "url": "https://www.ensemblgenomes.org/id/AT1G05600.1" }, { "database": "Ensembl Peptide", "id": "AT1G05600.1", "url": "https://www.ensemblgenomes.org/id/AT1G05600.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Theologis A, Ecker J R, Palm C J, Federspiel N A, Kaul S, White O, Alonso J, Altafi H, Araujo R, Bowman C L, Brooks S Y, Buehler E, Chan A, Chao Q, Chen H, Cheuk R F, Chin C W, Chung M K, Conn L, Conway A B, Conway A R, Creasy T H, Dewar K, Dunn P, Etgu P, Feldblyum T V, Feng J, Fong B, Fujii C Y, Gill J E, Goldsmith A D, Haas B, Hansen N F, Hughes B, Huizar L, Hunter J L, Jenkins J, Johnson-Hopson C, Khan S, Khaykin E, Kim C J, Koo H L, Kremenetskaia I, Kurtz D B, Kwan A, Lam B, Langin-Hooper S, Lee A, Lee J M, Lenz C A, Li J H, Li Y, Lin X, Liu S X, Liu Z A, Luros J S, Maiti R, Marziali A, Militscher J, Miranda M, Nguyen M, Nierman W C, Osborne B I, Pai G, Peterson J, Pham P K, Rizzo M, Rooney T, Rowley D, Sakano H, Salzberg S L, Schwartz J R, Shinn P, Southwick A M, Sun H, Tallon L J, Tambunga G, Toriumi M J, Town C D, Utterback T, Van Aken S, Vaysberg M, Vysotskaia V S, Walker M, Wu D, Yu G, Fraser C M, Venter J C, Davis R W", "evidence": [ { "database": "UniProtKB", "id": "Q9SYK1", "url": "https://www.uniprot.org/uniprotkb/Q9SYK1" } ], "reference": [ { "type": "PubMed", "id": "11130712", "url": "https://glygen.org/publication/PubMed/11130712" } ] }, { "title": "Genome-wide analysis of Arabidopsis pentatricopeptide repeat proteins reveals their essential role in organelle biogenesis.", "journal": "Plant Cell", "date": "2004", "authors": "Lurin Claire, Andr\u00e9s Charles, Aubourg S\u00e9bastien, Bellaoui Mohammed, Bitton Fr\u00e9d\u00e9rique, Bruy\u00e8re Cl\u00e9mence, Caboche Michel, Debast C\u00e9drig, Gualberto Jos\u00e9, Hoffmann Beate, Lecharny Alain, Le Ret Monique, Martin-Magniette Marie-Laure, Mireau Hakim, Peeters Nemo, Renou Jean-Pierre, Szurek Boris, Taconnat Ludivine, Small Ian", "evidence": [ { "database": "UniProtKB", "id": "Q9SYK1", "url": "https://www.uniprot.org/uniprotkb/Q9SYK1" } ], "reference": [ { "type": "PubMed", "id": "15269332", "url": "https://glygen.org/publication/PubMed/15269332" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9SYK1", "url": "https://www.uniprot.org/uniprotkb/Q9SYK1" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": 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"1", "start_pos": 1687436, "end_pos": 1689955, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT1G05640.1", "url": "https://www.ensemblgenomes.org/id/AT1G05640.1" }, { "database": "Ensembl Peptide", "id": "AT1G05640.1", "url": "https://www.ensemblgenomes.org/id/AT1G05640.1" } ] } } ], "glycosylation": [], "phosphorylation": [ { "start_pos": 94, "end_pos": 94, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SYK5", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SYK5" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ], "site_lbl": "Ser94" } ], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Theologis A, Ecker J R, Palm C J, Federspiel N A, Kaul S, White O, Alonso J, 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{ "id": "IPR006626", "url": "https://www.ebi.ac.uk/interpro/entry/IPR006626", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR011050", "url": "https://www.ebi.ac.uk/interpro/entry/IPR011050", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR012334", "url": "https://www.ebi.ac.uk/interpro/entry/IPR012334", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT1G05660", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT1G05660", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "CPTHEGC", "url": "https://omabrowser.org/oma/group/CPTHEGC/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "Q9SYK7", "url": "https://www.orthodb.org/?gene=Q9SYK7", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR31375", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31375", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00295", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00295", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "AT1G05660", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT1G05660", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9SYK7", "url": "https://www.uniprot.org/uniprotkb/Q9SYK7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9SYK7-1", "url": "https://www.uniprot.org/uniprotkb/Q9SYK7-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MTKSVIRFSLLFTLLTFIDVSISASNVFNVVSFGAKPDGVTDSTGAFLKAWQGACVSASSATVVVPKGTFLLKVITFGGPCKSKITFQVAGTVIAPEDYRTFGNSGFWILFNKVNRFSLVGGTFDARANGFWSCRKSGQNCPPGVRSISFNSAKDVIISGVKSMNSQVTHMTLNGCTNVVVRNVKLVAPGNSPNTDGFHVQHSTGVTFTGSTVQTGDDCVAIGPGTRNLLITKLACGPGHGVSIGSLAKELKEDGVENVTVSSSVFTGSQNGVRIKSWARPSNGFVRTVFFQDLVMKNVENPIIIDQNYCPTHEGCPNEYSGVKISQVTYKNIQGTSATQEAMKLVCSKSSPCTGITLQDIKLTYNKGTPATSFCFNAVGKSLGVIQPTSCLNR", "length": 394, "header": "tr|Q9SYK7-1|Q9SYK7_ARATH Isoform 1 of Pectin lyase-like superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SYK7-1" }, "isoforms": [ { "isoform_ac": "Q9SYK7-1", "url": "https://www.uniprot.org/uniprotkb/Q9SYK7/entry", "sequence": { "sequence": "MTKSVIRFSLLFTLLTFIDVSISASNVFNVVSFGAKPDGVTDSTGAFLKAWQGACVSASSATVVVPKGTFLLKVITFGGPCKSKITFQVAGTVIAPEDYRTFGNSGFWILFNKVNRFSLVGGTFDARANGFWSCRKSGQNCPPGVRSISFNSAKDVIISGVKSMNSQVTHMTLNGCTNVVVRNVKLVAPGNSPNTDGFHVQHSTGVTFTGSTVQTGDDCVAIGPGTRNLLITKLACGPGHGVSIGSLAKELKEDGVENVTVSSSVFTGSQNGVRIKSWARPSNGFVRTVFFQDLVMKNVENPIIIDQNYCPTHEGCPNEYSGVKISQVTYKNIQGTSATQEAMKLVCSKSSPCTGITLQDIKLTYNKGTPATSFCFNAVGKSLGVIQPTSCLNR", "length": 394, "header": "tr|Q9SYK7-1|Q9SYK7_ARATH Isoform 1 of Pectin lyase-like superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SYK7-1" }, "locus": { "chromosome": "1", "start_pos": 1694070, "end_pos": 1696191, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT1G05660.1", "url": "https://www.ensemblgenomes.org/id/AT1G05660.1" }, { "database": "Ensembl Peptide", "id": "AT1G05660.1", "url": "https://www.ensemblgenomes.org/id/AT1G05660.1" } ] } } ], "glycosylation": [], "phosphorylation": [ { "start_pos": 364, "end_pos": 364, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Thr", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SYK7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SYK7" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" } ], "site_lbl": "Thr364" }, { "start_pos": 365, "end_pos": 365, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Tyr", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SYK7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SYK7" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" } ], "site_lbl": "Tyr365" }, { "start_pos": 369, "end_pos": 369, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Thr", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SYK7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SYK7" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" } ], "site_lbl": "Thr369" }, { "start_pos": 372, "end_pos": 372, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Thr", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SYK7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SYK7" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" } ], "site_lbl": "Thr372" }, { "start_pos": 373, "end_pos": 373, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SYK7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SYK7" }, { "database": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" } ], "site_lbl": "Ser373" } ], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Theologis A, Ecker J R, Palm C J, Federspiel N A, Kaul S, White O, Alonso J, Altafi H, Araujo R, Bowman C L, Brooks S Y, Buehler E, Chan A, Chao Q, Chen H, Cheuk R F, Chin C W, Chung M K, Conn L, Conway A B, Conway A R, Creasy T H, Dewar K, Dunn P, Etgu P, Feldblyum T V, Feng J, Fong B, Fujii C Y, Gill J E, Goldsmith A D, Haas B, Hansen N F, Hughes B, Huizar L, Hunter J L, Jenkins J, Johnson-Hopson C, Khan S, Khaykin E, Kim C J, Koo H L, Kremenetskaia I, Kurtz D B, Kwan A, Lam B, Langin-Hooper S, Lee A, Lee J M, Lenz C A, Li J H, Li Y, Lin X, Liu S X, Liu Z A, Luros J S, Maiti R, Marziali A, Militscher J, Miranda M, Nguyen M, Nierman W C, Osborne B I, Pai G, Peterson J, Pham P K, Rizzo M, Rooney T, Rowley D, Sakano H, Salzberg S L, Schwartz J R, Shinn P, Southwick A M, Sun H, Tallon L J, Tambunga G, Toriumi M J, Town C D, Utterback T, Van Aken S, Vaysberg M, Vysotskaia V S, Walker M, Wu D, Yu G, Fraser C M, Venter J C, Davis R W", "evidence": [ { "database": "UniProtKB", "id": "Q9SYK7", "url": "https://www.uniprot.org/uniprotkb/Q9SYK7" } ], "reference": [ { "type": "PubMed", "id": "11130712", "url": "https://glygen.org/publication/PubMed/11130712" } ] }, { "title": "Large-scale comparative phosphoproteomics identifies conserved phosphorylation sites in plants.", "journal": "Plant physiology", "date": "2010-07", "authors": "Nakagami Hirofumi, Sugiyama Naoyuki, Mochida Keiichi, Daudi Arsalan, Yoshida Yuko, Toyoda Tetsuro, Tomita Masaru, Ishihama Yasushi, Shirasu Ken", "evidence": [ { "database": "iPTMnet", "id": "Q9SYK7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SYK7" } ], "reference": [ { "type": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9SYK7", "url": "https://www.uniprot.org/uniprotkb/Q9SYK7" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT1G05660", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT1G05660", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "extracellular region", "id": "GO:0005576", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005576", "evidence": [ { "database": "UniProtKB", "id": "Q9SYK7", "url": "https://www.uniprot.org/uniprotkb/Q9SYK7" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 2, "go_terms": [ { "name": "carbohydrate metabolic process", "id": "GO:0005975", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005975", "evidence": [ { "database": "UniProtKB", "id": "Q9SYK7", "url": "https://www.uniprot.org/uniprotkb/Q9SYK7" } ], "pmid": "" }, { "name": "cell wall organization", "id": "GO:0071555", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0071555", "evidence": [ { "database": "UniProtKB", "id": "Q9SYK7", "url": "https://www.uniprot.org/uniprotkb/Q9SYK7" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "lyase activity", "id": "GO:0016829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016829", "evidence": [ { "database": "UniProtKB", "id": "Q9SYK7", "url": "https://www.uniprot.org/uniprotkb/Q9SYK7" } ], "pmid": "" }, { "name": "polygalacturonase activity", "id": "GO:0004650", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004650", "evidence": [ { "database": "UniProtKB", "id": "Q9SYK7", "url": "https://www.uniprot.org/uniprotkb/Q9SYK7" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 258, "end_pos": 260, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [ 364, 365, 369, 372, 373 ], "sequon_annotation_sites": [ { "start_pos": 258, "end_pos": 260 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", 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"glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": 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"name": "", "url": "https://www.uniprot.org/uniprotkb/Q9SYM7", "locus": {} } ], "crossref": [ { "id": "AT1G78550", "url": "https://bar.utoronto.ca/thalemine/portal.do?externalids=AT1G78550", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "844191", "url": "https://www.ncbi.nlm.nih.gov/gene/844191", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR005123", "url": "https://www.ebi.ac.uk/interpro/entry/IPR005123", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR026992", "url": "https://www.ebi.ac.uk/interpro/entry/IPR026992", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR027443", "url": "https://www.ebi.ac.uk/interpro/entry/IPR027443", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR044861", "url": "https://www.ebi.ac.uk/interpro/entry/IPR044861", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR050295", "url": "https://www.ebi.ac.uk/interpro/entry/IPR050295", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT1G78550", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT1G78550", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "DFACQDW", "url": "https://omabrowser.org/oma/group/DFACQDW/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR47991", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR47991", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF03171", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF03171", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF14226", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF14226", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "AT1G78550", "url": 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"table_id": "publication", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "Q9SYN4-1", "uniprot_ac": "Q9SYN4", "uniprot_id": "Q9SYN4_ARATH", "mass": { "chemical_mass": 38986.0, "monoisotopic_mass": 38986.0 }, "refseq": { "ac": "NP_177968", "name": "F-box/LRR protein", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_177968" }, "gene_names": [ { "name": "F3F9.2", "type": "synonym", "evidence": [ { "id": "NP_177968", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_177968" }, { "id": "Q9SYN4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SYN4" } ] } ], "protein_names": [ { "name": "F-box/LRR protein", "type": "synonym", "evidence": [ { "id": "NP_177968", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_177968" }, { "id": "Q9SYN4", "database": "UniProtKB", "url": 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"https://www.genome.jp/dbget-bin/www_bget?ath:AT1G78450", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "PTHR11220", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR11220", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR11220:SF25", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR11220:SF25", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF04832", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF04832", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_565181", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_565181", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT1G78450", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT1G78450", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9SYN6", "url": "https://www.uniprot.org/uniprotkb/Q9SYN6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9SYN6-1", "url": "https://www.uniprot.org/uniprotkb/Q9SYN6-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MEAALSIFKLSFLLTLLSGGSDLIDSLPPNCNRAECPSYEVVHAGNGYEIHRYNTTVWISTEPIQDISLNEASGNGWNQLSDYMNGNNDYHQRIEIALPYITQVSQNLSTFIVSFFVPKAFQPDPPPGNNLHVQRWDSRYVAVKQISGYVADHKIGKQVAELKASLQGTVWAKAIEKSRETGGVGSAWAYTVAQFSWPFQWSQRVNEIWFPFEMEDEETVSIVTQ", "length": 225, "header": "tr|Q9SYN6-1|Q9SYN6_ARATH Isoform 1 of SOUL heme-binding family protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SYN6-1" }, "isoforms": [ { "isoform_ac": "Q9SYN6-1", "url": "https://www.uniprot.org/uniprotkb/Q9SYN6/entry", "sequence": { "sequence": "MEAALSIFKLSFLLTLLSGGSDLIDSLPPNCNRAECPSYEVVHAGNGYEIHRYNTTVWISTEPIQDISLNEASGNGWNQLSDYMNGNNDYHQRIEIALPYITQVSQNLSTFIVSFFVPKAFQPDPPPGNNLHVQRWDSRYVAVKQISGYVADHKIGKQVAELKASLQGTVWAKAIEKSRETGGVGSAWAYTVAQFSWPFQWSQRVNEIWFPFEMEDEETVSIVTQ", "length": 225, "header": "tr|Q9SYN6-1|Q9SYN6_ARATH Isoform 1 of SOUL heme-binding family protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SYN6-1" }, "locus": { "chromosome": "1", "start_pos": 29516989, "end_pos": 29518028, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT1G78450.1", "url": "https://www.ensemblgenomes.org/id/AT1G78450.1" }, { "database": "Ensembl Peptide", "id": "AT1G78450.1", "url": "https://www.ensemblgenomes.org/id/AT1G78450.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Theologis A, Ecker J R, Palm C J, Federspiel N A, Kaul S, White O, Alonso J, Altafi H, Araujo R, Bowman C L, Brooks S Y, Buehler E, Chan A, Chao Q, Chen H, Cheuk R F, Chin C W, Chung M K, Conn L, Conway A B, Conway A R, Creasy T H, Dewar K, Dunn P, Etgu P, Feldblyum T V, Feng J, Fong B, Fujii C Y, Gill J E, Goldsmith A D, Haas B, Hansen N F, Hughes B, Huizar L, Hunter J L, Jenkins J, Johnson-Hopson C, Khan S, Khaykin E, Kim C J, Koo H L, Kremenetskaia I, Kurtz D B, Kwan A, Lam B, Langin-Hooper S, Lee A, Lee J M, Lenz C A, Li J H, Li Y, Lin X, Liu S X, Liu Z A, Luros J S, Maiti R, Marziali A, Militscher J, Miranda M, Nguyen M, Nierman W C, Osborne B I, Pai G, Peterson J, Pham P K, Rizzo M, Rooney T, Rowley D, Sakano H, Salzberg S L, Schwartz J R, Shinn P, Southwick A M, Sun H, Tallon L J, Tambunga G, Toriumi M J, Town C D, Utterback T, Van Aken S, Vaysberg M, Vysotskaia V S, Walker M, Wu D, Yu G, Fraser C M, Venter J C, Davis R W", "evidence": [ { "database": "UniProtKB", "id": "Q9SYN6", "url": "https://www.uniprot.org/uniprotkb/Q9SYN6" } ], "reference": [ { "type": "PubMed", "id": "11130712", "url": "https://glygen.org/publication/PubMed/11130712" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9SYN6", "url": "https://www.uniprot.org/uniprotkb/Q9SYN6" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT1G78450", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT1G78450", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A075B5S0-1", "protein_name": "Immunoglobulin heavy variable 16-1", "gene_name": "Ighv16-1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "EVQLVESGGSLGQPGGSTKLSCEEASGFTFSDHWMDWFRQAPGMRLEWLANTNHDESGKGYAESVKDRFSISRDNSENLLYLQMNSLRNEDTALYYCAR", "length": 99 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A075B603-1", "protein_name": "T cell receptor alpha variable 6D-6", "gene_name": "Trav6-6", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDSSPGFVAVILLILGRTHGDSVTQTEGPVTVSESESLIINCTYSATSIAYPNLFWYVRYPGEGLQLLLKVITAGQKGSSRGFEATYNKETTSFHLQKASVQESDSAVYYCALG", "length": 114 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A075B625-1", "protein_name": "T cell receptor alpha variable 4N-3", "gene_name": "Trav4n-3", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MERNLGAVLGILWVQICWVSGDKVKQSPSALSLQEGTNSALRCNFSIAATTVQWFLQNPRGSLMNLFYLVPGTKENGRLKSAFDSKESYSTLHIRDAQLEDSGTYFCAAE", "length": 110 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A075B695-1", "protein_name": "T cell receptor alpha variable 9D-3", "gene_name": "Trav9d-3", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLLALLPVLGIHFLLRDAQAQSVTQPDARVTVSEGASLQLRCKYSYFGTPYLFWYVQYPRQGLQLLLKYYPGDPVVQGVNGFEAEFSKSNSSFHLRKASVHWSDWAVYFCAVS", "length": 113 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A075B6B4-1", "protein_name": "T cell receptor alpha variable 6-4", "gene_name": "Trav6-4", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MNTSPVLVTVMLLFMLGMRKTHGDSVTQKQGQVTLSEDDFLFINCTYSTTTYPTLLWYVQYLGQGPQLLLKVTTANNKGISRGFEATYDKGTTSFHLQKASVQESDSAVYFCALV", "length": 115 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A075B6D8-1", "protein_name": "T cell receptor alpha variable 3-3", "gene_name": "Trav3-3", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "GEQVEQRPPHLSVREGDSAVITCTYTDPNSYYFFWYKQEPGASLQLLMKVFSSTEINEGQGFTVLLNKKDKRLSLNLTAAHPGDSAAYFCAV", "length": 92 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A075B759-1", "protein_name": "Peptidyl-prolyl cis-trans isomerase A-like 4E", "gene_name": "PPIAL4E", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MVNSVVFFEITRDGKPLGRISIKLFADKIPKTAENFRALSTGEKGFRYKGSCFHRIIPGFMCQGGDFTRPNGTGDKSIYGEKFDDENLIRKHTGSGILSMANAGPNTNGSQFFICAAKTEWLDGKHVAFGKVKERVNIVEAMEHFGYRNSKTSKKITIADCGQF", "length": 164 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "A0A075B767-1", "protein_name": "Peptidyl-prolyl cis-trans isomerase A-like 4H", "gene_name": "PPIAL4H", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MVNSVVFFDITVDGKPLGRISIKLFADKIPKTAENFRALSTGEKGFRYKGSCFHRIIPGFMCQGGDFTRPNGTDDKSIYGEKFDDENLIRKHTGSGILSMVNAGPNTNGSQLFICTAKTEWLDGKHVAFGKVKERVNIVEAMEHFGYRNSKTSKKITIADCGQF", "length": 164 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "A0A087WP50-1", "protein_name": "Secretoglobin, family 1B, member 15", "gene_name": "Scgb1b17", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MMLAGAVVIFGVALLLLSSWGDCGICPAMKEDVHLFLNGTSEEYVEYVKQYKDDPEILENTEKIKQCVDSTLMEEDKAHANGFIEKIEASPLC", "length": 93 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A087WPA9-1", "protein_name": "Secretoglobin, family 2B, member 18", "gene_name": "Scgb2b18", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKGTLLLLGLLVTGELSFQTSEACVSFFEGYASVLSGSRVWLYQELQAFDATAEEKVALEKIQSCYSEERIRNILLEPKIMEAMVASPECRSYHSFNNFRSILDFISNLLGE", "length": 112 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A087WPG5-1", "protein_name": "Predicted gene 13283", "gene_name": "Gm13283", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLPVHLFLVGGVMLSCSPASSLDSGKSGSLHLERSETARFLADLRSVPGHQCLRDRTDFPCPWKEGTNITQMTLGETTSCYSQSLRQVLHRFDTEASRAAWHERALDQLLSSLWRELQVLKRPREQGQSCPLPFALAIRTYFRGFFRYLKAKAHSACSWEIVRVQLQVDLPAFPLSARRGPR", "length": 182 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A087WPY7-1", "protein_name": "RNA binding motif protein Y-linked family member 4", "gene_name": "Rbmyf4", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAETNQPGKIFIGGLNIKTRQKTLQEIFGRFGPVARVILMRDRETKKSRGFAFLTFRRLADAKNAVKEMNGVILDGKRIKVKQARRPSSLESGSKKRPPSFSRTRGASRILKCGRGGRSRARSGPSCEGNLGGDRYTPNFNVSSSGRHFAVKRNPSSKRDDPPSKR", "length": 166 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A087WQA9-1", "protein_name": "Secretoglobin, family 2B, member 21", "gene_name": "Scgb2b21", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKGTLLLLGLLVTGELSFQTTEACVPFFEGYASVVSGSRVWMYQEFQAFDATAEEKVALEKIQGCYREESLRNILLEPKIMEAMVASPECLSYYSSNNIRCILDLLSKLLGQ", "length": 112 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A087WQJ0-1", "protein_name": "Secretoglobin, family 1B, member 11", "gene_name": "Scgb1b11", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKLVAAVVILGAALLLLTSGGDCGICPAIKEDVRLFLNGTSEEYVEYVKQYKDDPVILENTAKINQCVDSTLTEKDMTHTTTFLKKIEDSLLC", "length": 93 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A087WQP8-1", "protein_name": "Predicted gene, 21698", "gene_name": "Gm21698", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MALFARLCRLFQRVNVDGRETREGRKDADLPSERNEGRRRWTWRMCMAHGQTTSPVPVKSKKQFEKEEKELIKKIQLTTEETNELRDRLIYVTKGSMNKRPYHRQTRHYKELKLKEKEIMTFLHDLEMKNMEARENNQELKKEKNFYRNLHTRILLGENLIKKKLAILQQESKEIHADWAIIQQRLVELNLSGKDEQEKTSNLEAQENQVSEAARELGLATAEEDSILQNELPCQEAPAEHHPQHPSSSSDESSSDESSYSTCPEWE", "length": 267 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A087WR36-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r90", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSSQNEAMKTTEEVALQIVLLCQFGIGTMANILLFIHNFSPLLTGCQLRPKQVICTNMAVSSILILFMTVFPNNVFVVQRNLMNDLQCKLEYFLRMVARSINLCSTCVLSTYQFVTLLPGNFGEMMVRGRRSKVISYSCCSCWLFGVLYNVYIPMKVSGPQNTHNKTDIKSKWFCVTSGFSVGIMFLWFAHDAIFISIMIWTSVSMVLLLYRHYQRLQYIFPPHQGTRGYAEIRAAHSIAMLVVTFVSFYLLHCICFILHIVFVDSRLWLRHVGEVLTSSFPTISPLLLIFRDPSYPCSLIFNYRKPVI", "length": 309 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A087WR44-1", "protein_name": "BTB domain containing 35, family member 15", "gene_name": "Btbd35f15", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIHALGKTWCLHKVFLCQSGYFANILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYVLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A087WR49-1", "protein_name": "Secretoglobin, family 2B, member 11", "gene_name": "Scgb2b11", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKGTLLLLGLLVTGELSFQTSEACVSFFEGYASVLSGSRVWLYQELQAFDATAEEKVALEKIQGCYSEERIRNILLEPKIMEAMVASPECRSYHSLNNFRSILEFISNLLGE", "length": 112 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A087WSM5-1", "protein_name": "Predicted gene 29049", "gene_name": "Gm29049", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MTSLKKKSRRKPSSQALGNIVGCRISYGWKEGNEPVTHWKAIILGQLPTNPSLYLVKYDGIDSVYGQELHSDERILNLKVLPHKVVFLQVRDVHLASALVCREVQHKFEGKDGSEDNWSGMVLAQVPFLQDYFYISYKKDPVLYVYQLLDDYKEGNLHIIPETPLAEARSGDDNDFLIGSWVQYTRDDGSKKFGKVVYKVLANSTVYCIKFLGDLHIYVYTLVSNIT", "length": 227 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A087WSN2-1", "protein_name": "BTB domain containing 35, family member 16", "gene_name": "Btbd35f16", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGKTWCLHKVFLCQSGYFANILKGTWRESHHGVINLIIKNEDIDTRSLLFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLNFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A087WUL8-1", "protein_name": "NBPF family member NBPF19", "gene_name": "NBPF19", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MVVSAGPWSSEKAEMNILEINETLRPQLAEKKQQFRNLKEKCFLTQLAGFLANRQKKYKYEECKDLIKFMLRNERQFKEEKLAEQLKQAEELRQYKVLFHSQERELTQLREKLREGRDASRSLNEHLQALLTPDEPDKSQGQDLQEQLAEGCRLAQHLVQKLSPENDNDDDEDVQVEVAEKVQKSSAPREMQKAEEKEVPEDSLEECAITYSNSHGPYDSNQPHRKTKITFEEDKVDSTLIGSSSHVEWEDAVHIIPENESDDEEEEEKGPVSPRNLQESEEEEVPQESWDEGYSTLSIPPEMLASYQSYSSTFHSLEEQQVCMAVDIGRHRWDQVKKEDQEATGPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYVLEQQRVGLAIDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSIPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQDPPCPRLSRELVEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYILEQQCVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSIPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQDPPCPRLSRELVEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYILEQQCVGLAIDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSIPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQDPPCPRLSRELVEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYILEQQCVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSIPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQDPPCPRLSRELVEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYILEQQCVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSIPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQDPPCPRLSRELVEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYILEQQCVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSIPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQDPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYILEQQCVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYILEQQCVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYILEQQCVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYILEQQCVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYILEQQCVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYILEQQCVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLAEKEPEVLQDPLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYILEQQCVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLAEKEPEVLQDPLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYILEQQCVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLAEKEPEVLQDPLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLNSVLMEVEEPEVLQDSLDGCYSTPSMYFELPDSFQHYRSVFYSFEEEHISFALYLDNRFFTLTVTSLHLVFQMLVIFPQ", "length": 3843 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "A0A087WXS9-1", "protein_name": "TBC1 domain family member 3I", "gene_name": "TBC1D3I", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MDVVEVAGSWWAQEREDIIMKYEKGHRAGLPEDKGPKPFRSYNNNVDHLGIVHETELPPLTAREAKQIRREISRKSKWVDMLGDWEKYKSSRKLIDRAYKGMPMNIRGPMWSVLLNTEEMKMKNPGRYQIMKEKGKRSSEHIQRIDRDVSGTLRKHIFFRDRYGTKQRELLHILLAYEEYNPEVGYCRDLSHIAALFLLYLPEEDAFWALVQLLASERHSLQGFHSPNGGTVQGLQDQQEHVVATSQPKTMGHQDKKDLCGQCSPLGCLIRILIDGISLGLTLRLWDVYLVEGEQALMPITRIAFKVQQKRLTKTSRCGPWARFCNRFVDTWARDEDTVLKHLRASMKKLTRKQGDLPPPAKPEQGSSASRPVPASRGGKTLCKGDRQAPPGPPARFPRPIWSASPPRAPRSSTPCPGGAVREDTYPVGTQGVPSPALAQGGPQGSWRFLQWNSMPRLPTDLDVEGPWFRHYDFRQSCWVRAISQEDQLAPCWQAEHPAERVRSAFAAPSTDSDQGTPFRARDEQQCAPTSGPCLCGLHLESSQFPPGF", "length": 549 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "A0A087X179-1", "protein_name": "TBC1 domain family member 3E", "gene_name": "TBC1D3E", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MDVVEVAGSWWAQEREDIIMKYEKGHRAGLPEDKGPKPFRSYNNNVDHLGIVHETELPPLTAREAKQIRREISRKSKWVDMLGDWEKYKSSRKLIDQAYKGMPMNIRGPMWSVLLNTEEMKLKNPGRYQIMKEKGKKSSEHIQRIDRDVSGTLRKHIFFRDRYGTKQRELLHILLAYEEYNPEVGYCRDLSHIAALFLLYLPEEDAFWALVQLLASERHSLQGFHSPNGGTVQGLQDQQEHVVATSQPKTMGHQDKKDLCGQCSPLGCLIRILIDGISLGLTLRLWDVYLVEGEQALMPITRIAFKVQQKRLTKTSRCGPWARFCNRFVDTWARDEDTVLKHLRASMKKLTRKKGDLPPPAKPEQGSSASRPVPASRGGKTLCKGDRQAPPGPPARFPRPIWSASPPRAPRSSTPCPGGAVREDTYPVGTQGVPSPALAQGGPQGSWRFLQWNSMPRLPTDLDVEGPWFRHYDFRQSCWVRAISQEDQLAPCWQAEHPAERVRSAFAAPSTDSDQGTPFRARDEQQCAPTSGPCLCGLHLESSQFPPGF", "length": 549 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "A0A0A0MQP3-1", "protein_name": "BTB domain containing 35, family member 12", "gene_name": "Btbd35f12", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGRTWCLHKVFLCQSGYFANILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYTDSDLSITPLEVPQGLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYVLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A0A6YW58-1", "protein_name": "Immunoglobulin heavy variable V8-2", "gene_name": "Ighv8-2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGRLTFSFLLLLPVPAYVLSQVTLKVSGPGILQPSQTLSLACTFSGISLSTSGMGLSWLRKPSGKALEWLASIWNNDNYYNPSLKSRLTISKETSNYQVFLKLTSVDTADSATYYGAWR", "length": 119 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A0A6YXW2-1", "protein_name": "Predicted gene, 20773", "gene_name": "Gm20773", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSSLMKKRRRKSSSNTLRNIVGCRISHSWKEGNEPVTQWKAIVLDQLPTNPSLYLVKYDGIDSIYGLELYSDDRILNLKVLPPIVVFPQVRDAHLARALVGRAVQHKFEGKDGSEVNWRGVVLAQVPIMKDLFYITYKKDPALYAYQLLDDYKEGNLHMIPDTPPAEERSGDDSDVLIGNWVEYTRKDGSKKFGKVVYQVLANPSVYFIKFHGDIHIYVYTMVPKIFKVEKS", "length": 232 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A0A6YXX7-1", "protein_name": "Predicted gene, 20807", "gene_name": "Gm20807", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSSLMKKRRRKSSSNTLRNIVGCRISHSWKEGNEPVTQWKAIVLDQLPTNPSLYLVKYDGIDSIYGLELYSDDRILNLKVLPPIVVFPQVRDAHLARALVGRAVQHTFEGKDGSEVNWRGVVLAQVPIMKDLFYITYKKDPALYAYQLLDDYKEGNLHMIPDTPPAEERSGDDSDVLIGNWVEYTRKDGSKKFGKVVYQVLANPSVYFIKFHGDIHIYVYTMVPKVLEVEKS", "length": 232 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A0B4J1J8-1", "protein_name": "T cell receptor gamma, variable 4", "gene_name": "Trgv4", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKNPGSQALLPLYLPWEANLADENPLLKVVIFLCLLTFGHGKLEQPEISISRPRDETAQISCKVFIESFRSVTIHWYRQKPNQGLEFLLYVLATPTHIFLDKEYKKMEASKNPSASTSILTIYSLEEEDEAIYYCSYG", "length": 138 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A0G2JE01-1", "protein_name": "Predicted gene, 21663", "gene_name": "Gm21663", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MALFARLCRLFQRVNVDGRETREGRKDADPPSERNEGRRRWTWRMCMAHRQTTSPVPVKSKKQFEKEEKELIKKIQLTTEETNELRDRLIYVTEGSMNKRPYHRQTRHYKELKLKEKEIMTFLHDLEMKNMEARENNQELKKEKNFYRNLHTRILLGENLIKKKLAILQQESKEIHADWAIIQQRLVELNLSGKDEQEKTSNLEAQENQVSEAARELGLATAEEDSILQNELPCQEAPAEHHPQHPSSSSDESSSDESSYSTCPEWE", "length": 267 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A0G2JGR8-1", "protein_name": "Predicted gene, 21680", "gene_name": "Gm21680", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MALFARLCRLFQRANVDGRETREGRKDADLPSESNEGRRRWTWRMWMAHRQTTSPVPVTSKKQFEKEEKELIKKIQLTTKEINELRDRLIYVTKGSMNKRPYHRQTRHYKELKLKEKEIMTYLHELEMKNMEARENKQELKKEKNFYRNLHTRILLEENLIKKKLVILQQESKEVHADWATIHQSLVELNLSGKDEQEKTSNLETQEHQVSEAARELVLATAEEDSILQNELPCQEAPAEHHPQHPPSSSDESSSDESSYSTCPEWE", "length": 267 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A0G2JMD5-1", "protein_name": "PRAME family member 33", "gene_name": "PRAMEF33", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MSLQAPSRLLELAGQSLLRNQFLTIFTLDELPREVFPLMFMEAFSMRRFEALKLMVQAWPFLRLPLGSLMKTPHLETLQAVLRGLDTLVAQKVRPRRWKLQVLDLQDVDENFWTIWSGARVLSCSPEAMSKRQTVEDCPRMGEHQPLKVFIDLCLKESTLDECLSYLFGWIHYRRGLVHLCCSKVQNYSMPTSSFRNLLERIYPDSIQELEVWKKCSLNKTGKFAPYLSQMSNLRELFLAFGYERELYVSVQWPCIPDLDSPFLCLYYPQMLYIKKISNIKEHLEHLLRYLKNPLGAFIFSDAYLADRDMECLSQYPSLSQLKELRLIHILMWTTNLQPLGALLEKVAATLKTLVLKDCRIQDPQLRVLLPALSHCSQLTTFNFHGNETSMNALKDLLRHTRGLSKLGLELYPAPLESLDYKGHVNWEILTPIRAELMRTLREVRQPKRIFFGPVPCPTCGSWPSEKVDFHLCS", "length": 474 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "A0A0G2JNH3-1", "protein_name": "Olfactory receptor", "gene_name": "LOC124905359", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MKIANNTVVTEFILLGLTQSQDIQLLVFVLILIFYLIILPGNFLIIFTIRSDPGLTAPLYFFLGNLAFLDASYSFIVAPRMLVDFFSEKKVISYRGCITQLFFLHFLGGGEGLLLVVMAFDRYIAICRPLHCSTVMNPRACYAMMLALWLGGFVHSIIQVVLILRLPFCGPNQLDNFFCDVRQVIKLACTDMFVVELLMVFNSGLMTLLCFLGLLASYAVILCHVRRAASEGKNKAMSMCTTRVIIILLMFGPAIFIYMCPFRALPADKMVSLFHTVIFPLMNPMIYTLRNQEVKTSMKRLLSRHVVCQVDFIIRN", "length": 316 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "A0A0G2JTV6-1", "protein_name": "RIKEN cDNA 4931429L15 gene like", "gene_name": "4931429L15Rikl", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MQFNPFSQDTWRHGHRRAYSNISERLSCLTLQEPSVSHLYQIFSPGDRRSYLLDDSLSNSIQRESLAVPMGLEDSGSRGQQKQQQPGAVLEDLEEQEIAPTDVKYRLQLLDEAPLRSKSSSVQSQGHKPGWIPSSKTHREWFKPWKMDMTYPENERSHSGHTQGRRMTPRAQWRHVEYDSQDQDTQSPVWSQALFPGLDKSSQGVIQCTQHVSREREMVSGWSMTHAPQEMGQAKQGPAFLKTKGTAKFNVATTARMSCLPPLKLLEKKVKSRCPPNTPGIFQDWRAQPQGLYGSDERLLAPFEDQVNTRVTYMPLFTEKVKFVSPKTAVSNPKQTHSQLSRTNQPAFPGQFRNWTSGREHLEKGLPE", "length": 368 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A0G2JVP7-1", "protein_name": "40S ribosomal protein S26", "gene_name": "Rps26-ps4", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MTKKRRNNGRTKKGRGHVQPIGCANCSWCVPKDKAIKKFVIWNIVETAAVRDISEARIFDAYVLPKLYVKLHYCVSLAIHSKVIRNQSHEARKDRTSPPRFRPAGAAPRPPPKPM", "length": 115 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A0G2JW93-1", "protein_name": "High mobility group protein B4", "gene_name": "Hmgb4l4", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGKDSKVRPKVNVSPYVHFMMDFRNQTREQQPNTYYDFTEFSRKCSEKWKTISKKEKKKYEALAKRDKDRYQREMRNYSGPRRERRRRDPDAPRKPPSSFLLFSQDHFDEIKEQHPNWTVAQVAKAAGRMWARCSEADKIPYEERAAVLRAKYLEEREAYYHQCQRGE", "length": 168 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A0G2JW96-1", "protein_name": "Zinc finger protein 94 like 1", "gene_name": "Zfp94l1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MLPRGSCDVMLESLRNVASLGHRIGTPDGLLRLKREDMFWLLTVARWSSGSMGDKNLEDMEFLEEVGLRHLPHEELFCSQIWQRITRELTKVRDCRVRVGENGSPMKRDNREDEYSKHSSQNSVFQVHHRECHEEEANERDFGCSHHLRTSTGEKSYKCEKCHNASHWFSSLQSHQGVCDRPRWNKSVSQFKIFRQWPLFHYQQSMPNGENAQEYEACGNAGKNSSGQTALFVHTAEEPYSCEECGARFSQSSYLQVHQRVHTGEKPYKCEECGKGFGWLSQLHAHHQSHTGEKPYTCDACGKGFSYSSHLNIHCRIHTGEKPYQCEECGKGFSQASNLLAHQRGHTGEKPYQCDACGKGFSRISDFNIHIRVHTGEKPYKCEECGKGFSQASNLLAHQRGHTGEKPYKCNTCGKSFRRSSDLNVHCRIHTGEKPYRCEKCDKVFSQFSSLQVHQRVHTGEKPYQCSECGKGFSVGSQLQAHQRCHTGERPYQCEECGKGFCRASNFLAHHGVHTGEKPYRCDMCGKHFRQRSYLQAHHRVHTGEKQFRCEECGKGFSWSSYLQAHQRVHMGEKPYKCEECGKGFSWSSSLLTHQRVHAEDEGQKDLSSSGGSYRK", "length": 616 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A0G2JYP5-1", "protein_name": "Olfactory receptor", "gene_name": "Or8g52b", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MPEGNHSRVTEFILTGLTDKPELQLPLFLLFLGIYLLTVLGNLGMIILILLSSHLQTPMYFFLSGLSFIDLGYSTVIIPKMLVNFVTEKNVISYPGCMTQLYCFIAFVLCECYMLSAMAFDRYVAICNPLRYNVTMSYQVCFWMIGGVYSIGFIEATIHTVCMLQVFFCKANVVNHFFCDLLPLFQLACSSTFVNETVLLCLSTLNFCVPTLTILSSYSFIIARIIRIKSTESRFKAFSTCSSHFSSVAVFFGSLGFVYFQPSSVSSKDQGKVSSVFYTIIVPMLNPLIYSLRNKDVKLALNKLFQKKIFHM", "length": 312 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A0G2K381-1", "protein_name": "Killer cell lectin-like receptor, subfamily A, member 4", "gene_name": "Klra4", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSEQEVTYSTLRFHNSSGLQNQVKTNETQGPRETGHRGCSVSWHLIMIPLGILCSILLVTVAVLVTHIFQYSQEKHELQEALNKLHHNYSTMQNESYLNEEMLGNKSSECDAYKSVLDSLNRQQNTCLRLTNIVLDCLQHKGRQVNVHLFCCGIKCYYFIMDKKQWKECEQACQGCKLSLLTIDDEDELKFLQLQVTPDSYWIGLSYDNKKHDSAWIDNNPSKL", "length": 224 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A0G2K3S0-1", "protein_name": "Olfactory receptor", "gene_name": "Or4c109", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MYNQSFVNEFILLGLSQNPQIKKISFVIFLLVYIATLVGNMMIVVTIAYSPALLGSPMYFFLAVLSFLDACVSSVVTPKMIVDMVYERKSISFECCMTQVFAVHFLTAVEVIVLAAMAYDRYVAICKPLHYSSIMNRRLCGTLVGVAWAGGFLHSIIQIAFTLPLPFCGPNVIDHFICDLFPLLKLACTDTHIFIILVFANSGSICIIIFSFLLISYGVILFALRAHSSEGRRKALSTCGSHITVVVFFFVPCILIYARPTSAFSFEKNVFVFTDVLTPLLNPMVYTFRNKEMINAIRKMWKRLIVVSDKY", "length": 311 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A0G2K622-1", "protein_name": "Histone RNA hairpin-binding protein", "gene_name": "Slbpl", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSLSSRMEMVSVGVTTEPCHARWEVETDEVVLRRRQKQIDYGKCTPGYQSFLQQVPRAQRQPGFHPQTPNKNRRYSRRSWDAQIRQWRRALHTWDPPSQPLHDRQAEGKAAGNFLRPVDTAPLDDLLDNWPQDPESSENWDRGEKEAQFAYLKVPASCPPQLKDELLHH", "length": 169 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A0G2K698-1", "protein_name": "Lamin tail domain containing 1", "gene_name": "Lmntd1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSHLASSHRVQKSSLARPERRAKSPSYTDISFWVPVMHRVGSQYQFESVCEQSSGYPGMPAQQVTPVPSQRGGILRKEEKTGTITPSKQHSSVHFFPKVMDSSSTLHLLSGSFSHEASANFHQIPSAQDSLSPGGLLTSKSNVPSCSRKDSIPGKQSTHQAASPGTSLMTLKKQPKPSSDLDTYVLGDGEDYFLSLFGDSKKLTSHTSQAEDVSKHLSVILEEVGQFVSSSLGDIKIAEVNVKGFFVRLVNSSNEKEVEIGNYILQQNVNGQAVSLYRFPHNITMQASGTVTVWAAASEAKPQQPTDFVWEEQSRFRSSPDCTTILCKPSGEAIAWYTPIHWKQAWEKLETDIEFERCSVVIPSLKSHIFGRTTSSVSSINKEKQEPTQKTPPQVCSVLLREKEILLTVLPNKSPWCRSPDTPPHPYSSLIEWHDSDFPGSSLGTQPKPQSTKPKPDPGTKEKKSTR", "length": 467 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A0G2K6E6-1", "protein_name": "Rho GTPase-activating protein 20-like", "gene_name": "LOC120093152", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGEIHRTLLCQGPVELTSGRKRNKRYLSLFDDVLVVSTNLTKKKFKIKCIIPLNYLWVVDDEELVRANKTCTCKTIFFYWATGNALATFRSEEQKVQWYTFLTSRSISEAKKGIKKTFPLHIFPEDIQTCDSSLCVTATNMDTVNDIMEKLLPMIRVHKIEDYQLWFSPGHKEAPRALQGHEYPYDIIMNNVQNNLSKSNSKIFTAFPPLPGLFMENQSWDTGGQFILKPRDSAGSQQQDAKERRRKSCMTSCFHGGCVPHHDQECSDPRDDKRGKLFGQDLSSICQDGKLPTIILDMLSRIKDKGPTTDDIFLITPNGSLCKTIKEKLDNGENVDIYQQPVHVVAWILKEFLQSIKGSLLTSKLYDQWLIVPEKVNDKEKLAAVKSLLEKLPKPNADLLRQLFRILHQIKTKSSVNNMSSFRLSLETAPCILWLPSYRNNILTNDIAKKISLVTFMIDNSPELFGEDIVAVWYETSLYHPPGLKYPCSQNTPSSNGIMEETEHGLSSCPGERTCTPDFDELPRSGAVASIPYEGILASEKGEGNESTTQPEPVQNSPTPQTKKELGNCSPNILKDVNVPAVILDMLSVIAEKGQCSDDIFRMQAEKSHWSLKEKVNTGKHVNLKEESVLTVASVVKDFIKNIEGSLLSCDLYENWLSIPDEGPLLGKIASIQNILLKMPKPNYVLLKQLICVLQKIKAASTNQLDTFDLSVRIAPHVLWNPTCKMFYGRDLSKKLSIIQFMIDNCQELFGENDNIFCEDNQKSYDINLSSDTLNTSGKATLMIETIDDHDVKTSKANTKELEMSSAVPHEGGPTAGHNGTTSKYNVPQEIILHD", "length": 835 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A0G2K6V9-1", "protein_name": "non-specific serine/threonine protein kinase", "gene_name": "Smokwl2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MDITSIKKTLGSQYRVVFFLGQGSYGRVRLAWHRRTQALVAIKTVEISKDTIRGILSEMTTLESLNHPNIISLYEVLITGTGVHFILQYAPGGNLGKLISEEGPLPEEKAKKMFGQVVSAIRYCHSLDIVHRDIKPQNILIDGEGNIKLIDFGQAIKCKPGTLLSRHCGTRDFNAPELVLREPYDGKSSDVWSLGVVLYFFTTGYLPFRGKTINDVEERITTGTYTIPTHLSGQLENLIHQILRVSPDMRPSVEEIENHPWIKKCEFKILPKTDPDYKIIEMLCAMGYKAKDILESLQKKRYDEPMGAYLSLKDHVSKGFDVGYITPAKPGDPCPPPPPSPAHPSVFGLPLRRRASEPIFGLHHRPPSREQNPLDLILSGLKMSRCVSMPPIAVYYPKKERSTSTRALHSTPVACPCVSNNMSEVEIILPPKQDIEMNTSSPPQRMGWFKRLRKGIRDCFSRLCCLPRAPKKKTQHRSSKRVAPLKKAASSTI", "length": 493 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A0G2K894-1", "protein_name": "Olfactory receptor", "gene_name": "Or4x6", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAHLLNVTEFIFLGLSPNKEGQRVCFVLFLLLYMAIVLGNLLMVVTVAASRNLGSPMYFFLSFLSFVEICYSSTTAPKLIFDLLAEKKSISVWGCMTQLFFMHFFGGTEIFLLTMMAYDRYVAICKPLHYTSIMNQQVCAVLVGSAWIGGFVHSFSQILLILPLSFCGPNVIDHYFCDLLPVLKLACSDTFLIGLLIVVNGGTLSVISFVVLLASYLVILFHLRTQSAEGRRKALSTCGSHVTVVILFFGPCVFIYSRPSDTLPVDKMIAVFYTVITPLLNPLIYSLRNAEVKKAMKNLWFRIMKADEK", "length": 309 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A0G2KB39-1", "protein_name": "Myb/SANT DNA binding domain containing 5 like 1", "gene_name": "Msantd5l1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MQREANQGESLENTEESNVGKSVKEEEQRPSGRSRSSWTDSEIRVFLQEWEVVEQEMGQPGRKLHKKTKSLCQRLYQQGLKKSWKSCFHLLLSLQDLHRTLCNERPGIEPLFSPYSEALYRILGSTPHESWFPGPLYDEADDSMLPVYPQPPMYQPSDYGITVPSAQLQGNPVPMMCQEDSPFPTWEPWNPSYPLSVPHLLPGFAPGDPSLQQPWSMCDLHQDPQ", "length": 225 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A0G2KBC9-1", "protein_name": "Leukocyte immunoglobulin-like receptor subfamily B member 3-like", "gene_name": "Lilrb3l", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MTFTFTALLCLGLTLRLWIPVLTGSLPKPILRVQPDSVVSMGTKVTFVCEETIGVKESHLYRNGNLQRTVLKNHQKPTNKTEFSFSNVDQQMQQYQCSYRTQTKSSDYSEPLELVVTGAYSKPSLSAQTNPVVTSGGYVTLKCEPSQDNHTLILTVEGSQKHSWRKDPECNRYTEKCHALFYVGPLTSNQRWIFRCYSYEKHTPQVWSAPSEPVELLVSGKLQKTTIKAEPGSVIRSGRAMTIWCQGDLDAEIYFLHKEGSHNTQSTQTLQQPGNKAKFLIPSVTQRHAGQYRCYCYSSAGWSEPSDTLELVVTGIYYYGVKLSGLPSPVVPEGGNVTLHCTSHSNYDKFILTKEDQKFTSSLDAEYIPSTGQHQALFVMGPMTPNYSGTFRCYGYYKHTPQLWSVPSELLKIFISGPSRKPSLLSHQGHILEPGMSLTLQCYSDTKYDKFALYKEGGTDIIESFSQWTKAGLSMTNFTLSVMPNSTVHSGENVTLMCWSTYSVDTFILSKEGSGQPPLRLKSKIQDQQYQSEFSMSGVTSKLSGTYRCYGSHDSSLYLKALIGVSVAFLLFLFILIFILLRRRHQEKFRKDDEDAQKGKELQLSTGAAEPVTRDRGHQKRSNPAAATQEESLYASVEDMETKDGVELDTWKPPEGDPQGETYAQVEPSRLRRAGAISPVVSREQLNTKYEQAEEGQEVDSQATESEEPQDVTYAQLCSRTLRQGTAAPPLSQAGEAPEEPSVYAALATARPGAVPKNKKQ", "length": 761 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A0G2KIH5-1", "protein_name": "Major histocompatibility complex class I LLA precursor", "gene_name": "mhc1lla", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MTGKVLFVLFLLSAPTTVLTDSHSLWLLGTYIKGETQFPKLSFTVMLDDLRVGFYNSETKEFIPRDNTTNEDEAVSDVLTVIQNTLEPFMMSTLTFKNGTESPQLFQITWHCELLDNDKPGQIIFKIAFSGSTTDEVSFYNDNFTCQCQNNMATVPLESFQMHYETVCYPNCIATIRDYLKKRQTQVNGKVQPKVRLIKKVHPKSGGFRLSCLATEFYPHSINLTLLRDGQPVSDHEVTGGNLLPNGDGTYQMRKSLEIRADEREKHKYTCSVSHLSLDKILDIDFEFDPSFLIKIVIPVVVLLSLMLVLTAVLIHKCKNKRAESKETITTASTPEPTEMSETLRK", "length": 346 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0A0R4IEQ0-1", "protein_name": "Guanine nucleotide-binding protein subunit alpha", "gene_name": "gna11a", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MTLESMMACCMSEEAKESKRINAEIDKQLRRDKRDARRELKLLLLGESGKSTFIKQMRIIHGTGYTDEDKRGYTKLVYQNIFTSMQAMIRATEHLKIPFRFEDNKKNALLVREVDVEKVCSFEQPYVAAINKLWMDPGIQEAYDRRREYQLSDSTKYYLNDLERISSRGYMPTQQDVLRVRVPTTGIIEYPFDLENIIFSYLSDLERISDPSYLPTQQDVLRVRIPTTGIIEYPFDLQSIIFRMVDVGGQRSERRKWIHCFENVTSIMFLVALSEYDQVLVESDNENRMEESKALFRTIITYPWFQNSSVILFLNKKDLLEEKILCSHLVDYFPEFDGPQNDAQSAREFILKMFVDLNPDSDKIIYSHFTCATDTENIRFVFAAVKDTILQHNLKEYNLV", "length": 400 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0A0R4ILG2-1", "protein_name": "FXYD domain-containing ion transport regulator", "gene_name": "fxyd2", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MGVESPEHSDADFTYDYELIRRGGLIFAAVLFCLGMVIIFSKKLRCGKSSATHEDNGDL", "length": 59 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0A0R4IU63-1", "protein_name": "Metabotropic glutamate receptor 5", "gene_name": "grm1b", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MRMLILRMNFFIVFLLFCTRLHLSTERSAVSRAASRSVARMDGDIIIGALFSVHHQPSAEKVAERKCGEIREQYGIQRVEAMFYTLDRINSDPYLLPNITLGCEIRDSCWHSSVALEQSIEFIRDSLISIRDEREGPKWCVEGNPSAQPPATKKPIAGVIGPGSSSVAIQVQNLLQLFNIPQIAYSATSIDLSDKTLYKYFLRVVPSDTLQARALLDIVKRYNWTYVSAVHTEGNYGESGMEAFKELASQEGLCIAHSDKIYSNAGEKHFDRLLRKLRERLPKARVVVCFCEGMTVRGLLMAMRRLGVAGEFLLIGSDGWADRDEVVEGYEEEAVGGITVKLQTEEVTSFNDYFLKLRLATNNRNPWFAEFWQHRFQCRLAGHPQENTNYRKNCSGYESLEDNYVQDSKMGFVINAIYAMAHGLHDMHEHLCPGHVGLCEEMDPIDGSKLLDFLLKTSFAGVSGEDVWFDENGDSPGRYDIMNLQYVEPGVFDYINVGSWHEGILSIDDYMIQMNRSEMVRSVCSEPCSKGEIKVIRKGEVSCCWICTPCKDNEYVQDEFTCKACELGWWPDEELQVCEPLPLRYLEWSHPESIAAVVFSCLGILVTSFVTLVFILYRDTPVVKSSSRELCYIILAGIFLGYICPFTLIARPSIASCYLQRLLVGLSASMCYSALVTKTNRIARILAGSKKKICTRKPRFMSAWAQVVIAFILISMQLTLEVTLIILEPPEPIKSYPSIREVFLICNTSNMGMVAPLGYNGLLILSCTYYAFKTRNVPANFNEAKYIAFTMYTTCIIWLAFVPIYFGSNYKIITTSFSVSLSVTVALGCMFTPKMYIIIAKPERNVRSAFTTSDVVRMHVGDGKIACRSNSLLNMFKRKKNASGNANSNGKSVSWSEPGSRHPPKGEHMWHRLSVHVKKQEAGSNQTAIIKPLTNTYNNPGMEFSDLSTKTLYNVAEEDEIDPIRYNPSNSPHLMAPVSKPMKEVGANLTFYTPEQHVPQQNSVLPQHAMIEHFQDDVVKYNSNMADLDEIISLPEPTDGIILALQPQVLHPHPILPMNVYQDEPSSPLEEVENEQFGLLHGYMYDNAQIHDEEELVQIKMAMEDSMALMPPSPFRDSLGSGSPVRNSPVSESVLCTPPSVTYASVILRDYKQSSSTL", "length": 1158 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0A0R4IUN8-1", "protein_name": "Trypsin inhibitor ClTI-1-like precursor", "gene_name": "spink2.9", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MLAQIVLLLCLSVMATAADKCPSVPNCSRYHPHACTMEYWPVCGSDGNTYGNECELCATIFEEKLNIILISKKGEC", "length": 76 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0A0R4J2B9-1", "protein_name": "BTB domain containing 35, family member 23", "gene_name": "Btbd35f23", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEGIAGASYIPVSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGRTWCLHKVFLCQSGYFTNILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQKCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICNLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYNQEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A140T8Q5-1", "protein_name": "BTB domain containing 35, family member 21", "gene_name": "Btbd35f21", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGRTWCLHKVFLCQSGYFANILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDMKLMYLLALSSDLLVMQKEIDVYTTLKIWMILYLNPCWNGTMKQLLQHANNWLSTHMAYIDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYNEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A1B0GQX3-1", "protein_name": "Cortexin domain containing 2", "gene_name": "Ctxnd2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MCVLMEDSSMSNGIDVDKGFAIAFVVLVFVFLIVMVFRCVKLVKNPYEVSSTTADLPLN", "length": 59 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A1B0GRH6-1", "protein_name": "Zinc finger and SCAN domain containing 4, pseudogene 3", "gene_name": "Zscan4-ps3", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MASQQAPAKDLQTNNLEFTPTDSSGVQWAEDISNSPSAQLNFSPSNNGCWATQELQSLWKMFNSWLQPEKQTKEQMISQLVLEQFLLTGHCKDKYALTEKWKASGSDMRRFMESLTDECLKPPVMVHVSMQGQEALFSENMPLKEVIKLLKQQQYATRPTPDNEQMPVDTTQDRLLATGQENSENECNNSCNATEANVGESCSGNEMDSLLIIQKEQHPEHEEGNVVRQFPHGARRASQGTPSHHVDIQSPPTTADVTMEEQPKDLSRENISEDKNNCYNTSRNAATQVYSGDNIPRNKSDSLFINKRIYHPEPEVGDIPYGFPQDSTRASQGTSTCLQESLGECFSEKDPREVPGLQSRQEQLISDPVLLGKNHEANLPCKSHQKRFCRDAKLYKCEECSRMFKHARSLSSHQKTHLNKKSELLCVTCQKMFKRVSDRRTHEIIHMPEKPFKCSTCEKSFSHKTNLKSHEMIHTGEMPYVCSLCSRRFRQSSTYHRHLRNYHRSD", "length": 506 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A1B0GS00-1", "protein_name": "Predicted gene, 36210", "gene_name": "Gm36210", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MHPGSPAAPGVSEPGPRELCAFVSGASAHMLRALQPRRIRPSKRRPNHRRFLHNQICREFAKIEAATQHLALTILSQKAPAQRPPFRRPPPPPPSPFLGVACAEAPMEAPHGSPSLSPVALDTSTLDLFDDILLTPTPRPLVTPDSFCQTLPAGNPQVASDVISHALGPGDQGQPTPIQAPRFSNLLLPPQKAQGGSLEPAALGCGWVDSWEAPYACDPQGVLDSWGAL", "length": 229 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A1B0GSB3-1", "protein_name": "Family with sequence similarity 236, member D", "gene_name": "Fam236d", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MIVMHLVGHPQLTGTEGVATEGVATAHTMLTSRGPRDTREPAPPTRSWRSRFQRALARVSKFFRRGRRTARG", "length": 72 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A1B0GSI2-1", "protein_name": "Family with sequence similarity 236, member C", "gene_name": "Fam236c", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MIVMHLVGHPQLTGTEGVATAHTKENSSRGPRETREPAPCTRSWRSRFQRAVARVSKFFRRRRRST", "length": 66 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A1C7CYU6-1", "protein_name": "Zinc finger and SCAN domain containing 4, pseudogene 2", "gene_name": "Zscan4-ps2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MASQQAPAKDLQTNNLEFTPTDSSGVQWAEDISNSPSAQLNFSPSNNGCWATQELQSLWKMFNSWLQPEKQTKEQMISQLVLEQFLLTGHCKDKYALTEKWKASGSDMRRFMESLTDECLKPPVMVHVSMQGQEALFSENMPLKEVIKLLKQQQYATRPTPDNEQMPVDTTQDRLLATGQENSENECNNSCNATEGNVGESCSGNEMDSLLIIQKEQHPEHEEGNVVCQFPHGARRASQGTPSHHVDFPSVPTTADVPMEEQPKDLSRENISEDKNNCYNTSRNAATQVYSGDNIPRNKSDSLFINKRIYHPEPEVGDIPYGVPQDSTRASQGTSTCLQESLGECFSEKDPREVPGLQSRQEQLISDPVLLGKNHEANLPCESHQKRFCRDAKLYKCEECSRMFKHARSLSSHQRTHLNKKSELLCVTCQKMFKRVSDRRTHEIIHMPEKPFKCSTCEKSFSHKTNLKSHEMIHTGEMPYVCSLCSRRFRQSSTYHRHLRNYHRSD", "length": 506 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A1C7CYV3-1", "protein_name": "Zinc finger and SCAN domain containing 4, pseudogene 1", "gene_name": "Zscan4-ps1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MASQQAPAKDLQTNNLEFTPTDSSGVQWAEDISNSPSAQLNFSPSNNGCWAIQELQSLWKMFNSWLQPEKQTKEQMISQLVLEQFLLTGHCKDKYTLTEKWKASGSDMRRFMESLTDECLKPPVMVHVSMQGQEALFSENMPLKEVIKLLKQQQSATRPTPDNEQMPVDTTQDRLLATGQENSENECNTSCNATEGNVGERCGGNEMDSLLIIQKEQHPEHEEGNVVCRFPHGARRASQGNSSHHVDFRSALTPADVPMEEQPKDLSRENISEDKNNCYNTSRNAATQVYSSDNIPRKKTDSLSINKRIYHPEPEVGDIPYGVPHDSTRASQGTSTCLQESLGECFSEKDPREVPGLESRQEEPISDPVLLGKNHEANLPCESHHKRFRRDAKLYKCEECSRMFKHARSLSSHQRTHLNKKSELLCFTCQKMFKRVSDRRTHEIIHMPEKPFKCSTCEKSFSHKTNLKSHEMIHTGEMPYVCSLCSRRFRQSSTYHRHLRNYHRSD", "length": 506 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A1D5P3Y4-1", "protein_name": "Large ribosomal subunit protein uL24m", "gene_name": "MRPL24", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MRLSALLRLAAPPKLPKGYRHGTWRPGTAAERLRNPPGQRRKKIFVEPISREDWKVFRGDTVQVLTGKDAGKQGMVTQVVRARNWVVVEGLNTHYRYVNRDAKYSSTYIASEAPLLLNQISLVDPEDRKPTEVDWRYTEEGERVRVSLRTGRIIPLPLWQRRDGIVPEQWIDGPKDTSVDDALDKTYTPSLKTFEEEIMDAMGIVETRRAKKSYWY", "length": 216 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A1D5PNZ8-1", "protein_name": "ODF3A protein", "gene_name": "LOC124417034", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MPASMDGAWVGTWRPHRPRGLISAQFPSPGPQYSIPGTTGYVGHSPTKARAPAYTFRGTKPPAAGSCGPGPCYFVEPAITRNGKYVAPGAQLRGRPATKTTVTPGPSDYRTEAANRHVFKCPPVQSMAFRREPLRTDHPPGPGTYTLPRLMGPNTVYTSASPCYSVRGRSQRGRFDEDLAKTPGPAALPKVPVDAYKTRAPAYTMAARPKAGEGKAAKPGPADYSVGRVTLIKPQAPASTFGIRHSLYTTPLIVE", "length": 255 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A1D5RLF0-1", "protein_name": "F-box and WD-40 domain protein 27", "gene_name": "Fbxw27", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "METHLPSLPLMKIFSYLDAYSLLQVAQVNKNWNALASSDVLWRKLCQKRWLFCDMVTLQLQDKETWKQFFVYRTWQEHSKTRANPRDFTYKEIPLQYGPCGYACYISGCGITRKGQDKSVVCMVNSKNTISTWDVHKSVITWVSPEQPASIKLLTTLPEMHIAVTVDIQSTIKLWDCHNREALATNILESPCKSLKAVITKDDPIVLVSDILGNLYIFRIPDLHLISTVNVLPCDIDEIYCSPQKKWVLLSKKQPYILPKVFYMSSLLRTSEFSAPVSTLLEISLCQEAFWTPRREDRLTLMSRSGCSKITKFETYDMKLEEFGNKIIVKGNSIAGFLLPYYTESLNWFGVSDKDTIVCSTEFSLLLFTNNGHRLQTFQYFSETIVRLSVDPVHVIVTCNDGSLDVYAWEERSLLLRKCYRLKNRRHLSPRGFINKTLCDDVSIIQLMIDGHDTWFLMAYALNICS", "length": 466 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A1P8ASP4-1", "protein_name": "Serine/threonine-protein kinase PRP4 homolog", "gene_name": "PRP4KB", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MVSDKHVESNHRKHRRSFSPSDEVFKSPKRHKSRHHHRRHGHRHHRDEEVQYNDDENVNGGDLDMEEGEILGKEGIGETLKKKLESVDEFGDIKSGQFRENNLAFNGDDGFPLICKSWIRVYNYLSYKCHGRNQRRERECEKRKEIEPDRERRKERGSVDRDSRGDREKDYLRDRDNDRGRSRDKARYSSRERGRENERERRSEKDRDKGREFQSDREKHKSLDDGYGEVRHKHSGHSRHDAEDDLELRSPTSVNGHDPNSGDVKETRGNVERTRIDNDDKGDVVVWEVEQEDEELNLIEESRRRTQAIMEKYKKKLEQQNGFSSHDLELANIPKQSSTVADVLGSGTLGPVTSAVNQAKAGLDIDAVDGEVAKLSSAVGESPAQLVISDSDRTLASTGLGEGSPKDKISDDMFTDDIFGESPADSQKMVCTLTQIIDLVFIEFSNSGFICFVFPVHHLTRYSRNGLPFVHYIFVGYLRGKGNGIPIVRSGLDDNWDDAEGYYSYQLGELLDDRYEIMATHGKGVFSTVVRAKDTKAELGEPEEVAIKIIRNNETMHKAGQTEIQILKKLAGSDPENKRHCVRFLSTFKYRNHLCLVFESLHLNLREIVKKYGRNIGIQLSGVRVYATQLFISLKHLKNCGVLHCDIKPDNMLVNEGRNTLKLCDFGSAMFAGTNEVTPYLVSRFYRAPEIILGLPYDHPLDIWSVGCCLYELFSGKIMFPGSTNNEMLRLHMELKGAFPKKMLRKGAFIDQHFDKDLCFYATEEDSVTRKTTKRMMVNIKPKEFGSVIKQRYKDEDSKLLVHFRDLLDRIFILDPQKRITVSQALAHPFITGK", "length": 834 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "A0A1P8BFV1-1", "protein_name": "Bax inhibitor-1 family protein", "gene_name": "", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MDGLKDFSRISPAIQSHLMRVYFSLFCILAASAFGAYLHMRLNIGGTITKLGWVLSLLEHVVSCPPYKHKIRFSLLLLFGVLHGASVGPCIKSTIDIDSSILITAFLGTAVIFFCFSAVAMLARRREYIYLGGLLSSGFSLLTWLKNSDQFASATVEIQMYLGLLLFVGCIVVNTQEIIEKAHCGDMDYAVHSLILYIGFVRVFLQILSIMWNTSADRIRRNNEET", "length": 226 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "A0A1W2P6Q8-1", "protein_name": "Cell division cycle 5-like protein", "gene_name": "Cdc5lrt6", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MPRIMIKGGVWRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWYEWLDPSIKKTEWSREEEEKLLHLAKLMPTQWRTIAPIIGRTAAQCLEHYEFLLDRTAQRDNEEETTDDPRKLKPGEIDPNPETKPARPDPIDMDEDELEMLSEARARLANTQGKKAKRKAREKQLEEARRLAALQKRRELRAAGIEIQKKRKRKRGVDYNAEIPFEKKPALGFYDTSEENYQALDADFRKLRQQDLDGELRSEKEGRDRKTDKQRLKRKKESDLPSAILQTSGVSELTKKRSKLVLPAPQISDAELQEVVKVGQASEVARQTAEESGITNSASSTLLSEYNVTNNSIALRTPRTPAPQDRILQEAQNLMALTNVDTPLKGGLNTPLHESDFSGVTPQRQVVQTPNTVLSTPLRTPSNGAEGLTPRSGTTPKPVTNATPGRTPLRDKLNINPEDGMADYSDPSYVKQMERESREHLRLGFLGLPAPKNDFEIVLPENAEKELEEREIDDTYIEDAADVDARKQAIRDAERVKEVKRMHKAVQKDLPRPSEVNETILRPFNVEPPLTDLQKSEELIKKEMITMLHYDLLHHPYEPSGNKKGKNVGLATNDSEHITYLEHSPYEKFSKEDLKKAQGALVQEMEVVKQGMSHGELSSEAYNQVWEECYSQVLSLIAQSRYTRANLASKKDRIESLEKRLEINRGHMTTEAKRAAKMEKKMKILLGGYQSRAMGLMKQLNDLWDQIEQAHLELRTFEELKKREDSAIPRRLECLKEDVQLQQEREKELQQRYADLLMEKETLQAKF", "length": 802 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A1W2P7S8-1", "protein_name": "Cell division cycle 5-like protein", "gene_name": "Cdc5lrt1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MPRIMIKGGVWRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWYEWLDPSIKKTEWSREEEEKLLHLAKLMPTQWRTIAPIIGRTAAQCLEHYEFLLDKTAQRDNEEETTDDPRKLKPGEIDPNPETKPARPDPIDMDEDELEMLSEARARLANTQGKKAKRKAREKQLEEARRLAALQKRRELRAAGIEIQKKRKRKRGVDYNAEIPFEKKPALGFYDTSEENYQALDADFRKMRQQDLDGELRSEKEGRDRKTDKQRLKRKKESDLPSAILQTSGVSEFTKKRSKLVLPAPQISDAELQEVVKVGQASEVARQTAEESGITNSASSTLLSEYNVTNNSIALRTPRTPAPQDRILQEAQNLMALTNVDTPLIGGLNTPLHESDFSGVTPQQQVVQTPNTVLSTPLRTPSNGAEGLTPRSGTTPKPVTNATPGRTPLRDKLHINPEDGMADHSDPSYVKQMERESREHLRLGFLGLPAPKNDFEIVLPENAEKELEEREIDDTYIEDAADVDARKQATRDAERVKEMKRMHKAVQKDLPRPSEVNETILRPFDVEPPLTDLQKSEELIKKEMITMLHYDLLHHPYEPSGNKKGKNVGFATNDSEHITYLEHSPYEKFSKEDLKKAQDALVQEMEVVKQGMSHGELSSEAYNQVWEECYSQVLYLPAQSCYTRANLASKKDRIESLEKRLEINRGHMTTEAKRAAKMEKKMKILLGGYQSRAMGLMKQLNDLWDQIEQAHLELRTFEELKKHEDSAIPRRLECLEEDVQRQQEREKELQQRYADLLMEKETLQAKF", "length": 802 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A1W2P7Z8-1", "protein_name": "Cell division cycle 5-like protein", "gene_name": "Cdc5lrt7", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MPRIMIKGGVWRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWYEWLDPSIKKTEWSREEEEKLLHLAKLMPTQWRTIAPIIGRTAAQCLEHYEFLLDRTAQRDNEEETTDDPRKLKPGEIDPNPETKPARPDPIDMDEDELEMLSEARARLANTQGKKAKRKAREKQLEEARRLAALQKRRELRAAGIEIQKKRKRKRGVDYNAEIPFEKKPALGFYDTSEENYQALDADFRKLRQQDLDGELRSEKEGRDRKTDKQRLKRKKESDLPSAILQTSGVSELTKKRSKLVLPAPQISDAELQEVVKVGQASEVARQTAEESGITNSASSTLLSEYNVTNNSIALRTPRTPAPQDRILQEAQNLMALTNVDTPLKGGLNTPLHESDFSGVTPQRQVVQTPNTVLSTPFRTPSNGAEGLTPRSGTTPKPVTNATPGRTPLRDKLNINPEDGMADYSDPSYVKQMERESREHLRLGFLGLPAPKNDFEIVLPENAEKELEEREIDDTYIEDAADVDARKQAIRDAERVKEVKRMHKAVQKDLPRPSEVNETILRPFNVEPPLTDLQKSEELIKKEMITMLHYDLLHHPYEPSGNKKGKNVGLATNDSEHITYLEHSPYEKFSKEDLKKAQGALVQEMEVVKQGMSHGELSSEAYNQVWEECYSQVLSLIAQSRYTRANLASKKDRIESLEKRLEINRGHMTTEAKRAAKMEKKMKILLGGYQSRAMGLMKQLNDLWDQIEQAHLELRTFEELKKREDSAIPRRLECLKEDVQLQQEREKELQQRYADLLMEKETLQAKF", "length": 802 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A1W2P855-1", "protein_name": "Cell division cycle 5-like protein", "gene_name": "Cdc5lrt8", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MPRIMIKGGVWRNTEDEILKAAIMKYRKNQWSRIASLLHRKSAKQCKARWYEWLDPSIKKTEWSREEEEKLLHLAKLMPTQWRTIAPIIGRTAAQCLEHYEFLLDRTAQRDNEEETTDDPRKLKPGEIDPNPETKPARPDPIDMDEDELEMLSEARARLANTQGKKAKRKAREKQLEEARRLAALQKRRELRAAGIEIQKKRKRKRGVDYNAEIPFEKKPALGFYDTSEENYQALDADFRKLRQQDLDGELRSEKEGRDRKTDKQRLKRKKESDLPSAILQTSGVSELTKKRSKLVLPAPQISDAELQEVVKVGQASEVARQTAEESGITNSASSTLLSEYNVTNNSIALRTPRTPAPQDRILQEAQNLMALTNVDTPLKGGLNTPLHESDFSGVTPQRQVVQTPNTVLSTPLRTPSNGAEGLTPRSGTTPKPVTNATPGRTPLRDKLNINPEDGMADYSDPSYVKQMERESREHLRLGFLGLPAPKNDFEIVLPENAEKELEEREIDDTYIEDAADVDARKQAIRDAERVKEVKRMHKAVQKDLPRPSEVNETILRPFNVEPPLTDLQKSEELIKKEMITMLHYDLLHHPYEPSGNKKGKNVGLATNDSEHITYLEHSPYEKFSKEDLKKAQGALVQEMEVVKQGMSHGELSSEAYNQVWEECYSQVLSLIAQSRYTRANLASKKDRIESLEKRLEINRGHMTTEAKRAAKMEKKMKILLGGYQSRAMGLMKQLNDLWDQIEQAHLELRTFEELKKREDSAIPRRLECLKEDVQLQQEREKELQQRYADLLMEKETLQAKF", "length": 802 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A1W2PP81-1", "protein_name": "TATA-box-binding protein-associated factor 11-like protein 5", "gene_name": "TAF11L5", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "METGRQTGVSAEMLAMPRGLKGSKKDGIPEDLDGNLEAPRDQEGELRSEDVMDLTEGDSEASASAPPAAKRRKTHTKGKKESKPTVDAEEAQRMTTLLSAMSEEQLSRYEVCRRSAFPRARVAGLMRAITGSSVSENAAIAMAGIAKLFVGEVVEEALDVCEMWGETPPLQPKHLREAVRRLKPKGLFPNSNCKRIMF", "length": 198 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "A0A1Y7VLT7-1", "protein_name": "Eukaryotic translation initiation factor 4C", "gene_name": "Eif1ad4", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MPKNKGKGGKNRRRGKNENESEKRELVFKEYGQEYAQVTKMLGCGWLEAMCFDGVRRLCHIRGKLRKKVWINTSDIILIGLRDYQDNKADVILKYNQDEARSLKAYGELPEHAKINEMDTFGPGDDDEIVFDDIGEDDEDIDDI", "length": 144 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A1Y7VNG9-1", "protein_name": "Eukaryotic translation initiation factor 4C", "gene_name": "Eif1ad18", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MPKNKGKGGKNRHRGKNENESEKRELVFKEYGQEYAQVTKMLGCLWLEAMCFDGVKRLCHIRGKLRKKVWISTSDIILIGLRDYQDNKADVILKYNPDEARSLKAYGELPEHAKINETDTFGPGDDDEIVFDDIGDDDEDIDDI", "length": 144 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A286YCH8-1", "protein_name": "Predicted gene, 47985", "gene_name": "Gm47985", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MALGAELSETLVEKPEHMNLEMSILAPSKRKQLLDKKAEDKQPPESRGNNGRSSKSSPMGKDNTWPSPEAKVPSQKRSGQSWAVSSCGPHKRSSKLEDKRRNRPSRFRERGRDKPGSTHKRDSSHTKLHVKDRRSQPRSPVRTLKRSRSGDRQGAPHNSAKRHRQTSPPEASSLPTFSLLMSRVFTNVDALQVSLDDLQAPGGAFLRVPSSSTEPIVLQRAWLTWQLSHAGAALHWALHTVKSILTSQASLPRYTWPQGYSFTADPRPVPTSKIQASQLAQRPGDLASPNPSVDTRSILG", "length": 300 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A286YD13-1", "protein_name": "Predicted gene 8947", "gene_name": "Gm8947", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MALGAELSETLVEKPEHMNLEMSILAPSKREQLLDKKAEDKQPPESRCNNGRSSKSSPMGKENTWPSREAKVPSQKRSGQSWAVSSCGPHKRSSKLEDKRRNRPSRFRERGRDKPGSTHKRDSSHTKLHVKDQRSQPRSPVRTLKRSRSGDRQGAPHNYAKRRRQTFPPEASCSLPTFSLLMSRVFTNVDALQVSLDDLQAPGGAFLRVPSSSTEPSVSQRAWLTWQLSHAGAALHWALHTVNSILTAQASLPRYIWPQGYSFTADPRPVPTSKIQASQLAQRPGDLASPNPSVDTRSILG", "length": 301 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A286YE43-1", "protein_name": "Predicted gene, 47996", "gene_name": "Gm47996", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MALGAELSETLVEKPEHMNLEMSILAPSKRKQLLDKKAEDKQPPESRGNNGRSSKSSPMGKDNTWPSPEAKVPSQKRSGQSWAVSSCGPHKRSSKLEDKRRNRPSRFRERGRDKPGSTHKRDSSHTKLHVKDRRSQPRSPVRTLKRSRSGDRQGVPHNSAKRCRQTSPPEASSLPTFSLLMSRVFTNVDALQVSLDDLQAPGGAFLRVPSSSTEPSVSQRAWLTWQLSHAGAALHWALHTVNSILTAQASLPRYTWPQGYSFTADPRPVPTSKIQASQLAQRPGDLASPNPSVDTRSILG", "length": 300 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A286ZIN6-1", "protein_name": "G-protein coupled receptors family 1 profile domain-containing protein", "gene_name": "LOC110258935", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MANLTSMSGFLLMGFSDDHKLQILHALLFLVIYLLALTGHLLIITITTLDHHLHSPMYYFLKHLSLLDLCFISVTVPQSIANSLMNNGYISLGQCILQVFFFIALASSEVAILTVMSYDRYVATCQPLQYETIMDPWACRQAVIAVWVTGGLSGLTHTAINLSVPLCGDRVIHQFFCDVPQMLKLACSYEFINEIAVAAFTTSTAFFCLISILLSYTRIFSAVLRIPSAQGRTKVFSTCLPHLLVVTFFLSAAGFEFLRPPSDSQSAMDFMFSIFYTVVPLTLNPVIYSLRNKAMKAALRKVLSKEEFAQRKKYFKALFQL", "length": 321 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A286ZIP8-1", "protein_name": "Olfactory receptor", "gene_name": "LOC110259124", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "QEYKANGGDNTTTIIHFVLLGFSDFPHIRPALFVVFLVIYILTLTWNLCLIVLIRLDSHLHTPMYFFLSNLSFIDICYVSSTAPKMLYDFFQAKPTITVVGCAIQYFVCSTMGLSECCLMTVMAYDRYAAICNPLLYSSIMSPSLCGRMVLGSYMAGLSATLSQVCAVLQLHFCGPNVIHHFFCDMPLMLGLSCSDTFFVQVLTAIFTVFFGIINALVIMMSYVYIVISVMKITSAKGRSKAFNTCASHLTAVTLFYTSGIFVYLSSSSGGSSGLDRFAAVFYTVVIPMLNPLIYSLRNKDIKDALKRLKKRKECC", "length": 316 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A286ZLI4-1", "protein_name": "C-C motif chemokine ligand 24", "gene_name": "CCL24", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MFSPSSLIKASGQLQCPAGNRLLAPTLSSCIAALSPELPLLLSRHGRPVTVAASLLFLGLCAYSFAPADSVTMPSSCCIYFISKKIPESRVASYQLSNSSVCPQAGVIFTTRKGQKFCGDPKQLWVQKYMKKLDAKRKKASTRIRAMGTGAPVRRGPANSTSI", "length": 163 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A286ZSE3-1", "protein_name": "Olfactory receptor", "gene_name": "LOC110258059", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MRNRTITTFILLGLTDDPKLQVLIFIFLFVAYMLSLTGNLTIITLTFVDSHLKTPMYFFLKNFSFLEISFISSCIPRYLYSIATGDKVITYNACVIQVCFTDLCGVTEFFLLAAMSYDRYVAICKPLHYVTIMSSRVCGILISSCWMAGLCVLIPPLSLGLNLKFCDSNRLDHFGCDAFPLVKISCSDTWPMEQTVIICAVLTLNMTLTCVVLSYAYIIKTIFRFPSVQQRKKAFSTCSSHMIVVSITYGTCIFIYMNPTAKGEVTIKKVVSLLIFSVSPTLNPFIYTLRNNQVKRAFKDSIKRIALLSTR", "length": 311 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A286ZU87-1", "protein_name": "G-protein coupled receptors family 1 profile domain-containing protein", "gene_name": "LOC100152920", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MEGENQTVLFEFIILGFSNLKELQFLLFTIFLVTYICTLGGNSFIILETMTNLHLHTPMYFFLENLAFLDICYTTTNVPQMMAHLLSEKKSISYLGCMAQLFAFIFFVGSESLLLAAMAYDHYIAICKPLRYSVIMNKVLYSQLAASCWSGGFLNSTVHTVLTFRLPFCGNNQINYFFCDIPPLLVLSCGDTSVNELALLSIGVVIGWTPFLCIVLSYLYIISTILRIRSSKGRQKAFSTCASHLTIVLLYYGSAIFTYGRPISTYSLEKDRLISVLYSIVTPMLNPIIYSWRNKDIQEAMQVMGRKWKASSSLSFDV", "length": 318 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A286ZVC9-1", "protein_name": "Olfactory receptor", "gene_name": "LOC110258401", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MGQRNSTSLHDFILLGFSDHPKLEMALSGVVATFYLITLVGNTAIILASLLDSHLHTPMYFFLRNLSFLDLCFTTSIVPQMLVNLWGPHKTISYGGCVIQLYVYMWLGSIECLLLAVMSYDRFTAICKPLHYLVIMNPHLCLKMIIMVWSISLANSVVLCTLTLNLPRCGNNLLDHFLCELPAMLKIACIDTTAVELSVFALGIAIVLTPLILILISYGYIAKAVLRMKSRAGQRKAINTCGSHLTVVSIFYGAIIYMYLQPGNNASRGQVIFLTLFYTIITPSLNPLIYTLRNKDMKEALKKLMRVDHKSTKSKRTWKS", "length": 320 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A286ZWC4-1", "protein_name": "Zinc finger protein 16", "gene_name": "ZNF16", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MLPLSQVPAMPSLRTRPGKAEMEPSVPGPSLRTPGTQVSVSDAPAVTHPGSALHGPLSCGDTEPGATPPHHQLADWDLRTEGSQLLQKEDASEDLESQAGTSEDYVGAGSQAPERGELCADVLGSDWGVPQGERLSLCQEGGFMPAYLLPGSPLEEPEIDTEPLERNFGLIITPVASPGEPEEETPQPFDACDQSVHCGVDLAGHEGLHAAESSFICGECGESVGLHSDLLRHRLSHRGEKPHVCAECGEAFSQSASLESHQRSHEPAKPFQCSTCGKAFGRSSSLIKHHKVHTRERPHACGECGRPFSRFSNLVKHRRVHTGEKPYRCSECGKAFSQSSSLLQHRRVHTGEKPHVCPVCGKAFSYSSVLRKHQIIHTGVKPYSCSACGKAFSHSSALIQHQGVHSGDKPYECRECGKTFGRSSNLILHQRVHTGEKPYECAECGKTFSQSSTLIQHQRIHNGLKPHECDQCGKAFNRSSNLIHHQKVHTGEKPYTCVECGKGFSQSSHLIQHQIIHTGERPYKCGECGKAFSQRSVLTQHQRVHTGEKPYDCEACGKAFSQRSKLVKHQLIHARE", "length": 576 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A286ZX75-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100156955", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "IFIMEWENQTASSDFILMGIFSHTPTHIFLFSLVLGIFTVALLANTVMVLLICLDRRLHTPMYFLLSQLSLMDLMLICTTVPKMARNYLSGRKSISVAGCETQIFFSVSLFGAECFLLAVMAYDRYAAICYPLQYPQLMNWNVCGLLAASSWILGVFDGIVDIAATLSFSYCGSREIPQFFCDITALLRLSCTDTSTFETLVFICCVVMLLFPLSLIIISYTRVIITVIRMSSGEGRHKAFTTCSSHLVVVGMYYGAAMFIYMRPTSNRSPAQDKMVSAFYTILTPMLNPLIYSLRNKDVAKAFSRCWGREI", "length": 312 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A286ZY56-1", "protein_name": "Olfactory receptor", "gene_name": "LOC110258501", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "METDNDTQILEFLLLGFSKQPESQPIIFGLFCSMYLITVFGNLLIILAVISDYHLHIPMYFFLSKLSFVDICFTSTTIPKMLWNIQTQSKAITYEGCITQIYFLILFAVLDILLLTVMAYDRFVAICHPLHYTVIMNPRLCGLLVLVPWIMSVLNSLLQTLMMMQLSFCTNFEIPHFFCELNQMIQLACSDTFLNTIVMYFAAALLCGGPFFGILCSYSKIVSSIYRISSAQGKYKAFSTCASHLSVVSLFYCTMLGVYLSSAAAHSSHSSATASVMYTVITPMLNPFIYSLRNKDMKRALKALFVKGPM", "length": 310 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A286ZZP6-1", "protein_name": "HSF-type DNA-binding domain-containing protein", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MANAPSEIQGVSPKDESTGSESSITSPWCDNSITGDLDLRSQIEEKAFQALSEGSLMKEPCHTLCASEPDGDNDFPPLPFPRKLWEIVESDRFKSIWWDENGTSIVINEERFKKEVLERKAPFRIFETESMKSLVRQLNLYGFTKLRRNFQRPASLANILAEDNEVSAWNKLQFYHNPNFKRGCPHLLVRMKRRVRVKNASPVSASVLQGCSKKRSRTGGDVDNHNSDVAAETRGEDAFSASTNLNVPLIRWPSMSQRISNTTTPTRSGLSSPSSPSFRPPGQIAMAQHAIFSQLTTFHMHSQSSYSPASGHIVNFITTTTSISQYRCISYFPSGYFGLRVEPSPLPTRYQNISPTEGPVSNPQPAAHPWFPMPMATDTSAASLSRPNPQSSSVSEHLPNYH", "length": 402 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287A7E2-1", "protein_name": "Olfactory receptor", "gene_name": "LOC110258743", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MGQRNSTSLHDFILLGFSDHPKLEMALSGVVATFYLITLVGNTAIILASLLDSHLHTPMYFFLRNLSFPDLCFTTSIVPQMLVNLWGPHKTISYGGCVIQLYVYMWLGSIECLLLAVMSYDRFTAICKPLHYLVIMNPHLCLKMIIMVWSISLANSVVLCTLTLNLPRCGNNLLDHFLCELPAMLKVACIDTTAVELSVFALGIAIVLTPLILILISYGYIAKAVLRMKSRAGQRKAINTCGSHLTVVSIFYGAIIYMYLQPGNNASRGQVIFLTLFYTIITPSLNPLIYTLRNKDMKEALKKLMRVDHKSTKSKRTWKS", "length": 320 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287A7J9-1", "protein_name": "Olfactory receptor", "gene_name": "LOC110258750", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MEQNNGTEVKEFILLGFAGQHKSWLVLFIVFLGIYVVTLVGNIGMILLIKIEASLHTPMYFFLQNLAFVDLCYATAITPKVLQNLMSTEKSISFIGCMVQLFVYGTFVTSDGYILAAMAVDRYVAICNPLRYPTVMSQRVCIQLLIGSCFMGFLNACVNGSLTFQLNFCKSNKINHFFCDAPPILALSCSSIYFNIMLLAAFVGFNLMFTVSIIIFSYIFILAAILKISSAAGRKKAFSTCGSHLTAVTIFHGTLSYMYLHHRTLESQEQEKLASVFYGIVIPMLNPLIYSLRNQDVREALKEIGKKML", "length": 309 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287A951-1", "protein_name": "Small ribosomal subunit protein uS8", "gene_name": "LOC100514137", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MVHMNVLTDALESINNSEKRGKRQVLTRLCFKVIVRFLTVMMKHGTPIGKFEIMDDPRARKIVVNLTGRLNKCGVISPRFDGQLKDLEKWQNKLLPSCQFGFIVLTTSAGIMHHEEAR", "length": 118 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287ACV2-1", "protein_name": "HSF-type DNA-binding domain-containing protein", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MAHAPSEIQGVSPKDAPTGSESSITSPWCDNSITGDLDLRSQIEEKAFQALSEGSLIKEPCHTLCASEPDGDNDFPPLPFPRKLWEIVESDRFKSIWWDENGTSIVINEERFKKEVLERKAPFRIFETESMKSLVRQLNLYGFTKLRRNFQRPASLANILAEDNEDSAWNKLQFYHNPNFKRGCPNLLVRMKRRVRVKNASPVSASLLQGCSKKRSRTGGDVDNHNSDVAAETRGEDAFSTSTNLNVPLIRWPSMSQRISNTTTPTRSGLSSPSSPSVRPPGQIVMAQHAIFSQLTTFHMHSQSSYSPASGHIVNFITTTTSISQYHRISNFPSGYFGLRVEPSPLPTRYQNISPTEGPVSNPQPAAHPWFPMPMATDTSVASLSRPNPQSSSISEHHPNYY", "length": 402 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287AEV7-1", "protein_name": "Uncharacterized protein", "gene_name": "WFDC10AL", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MKWWGLQWLMLSCLAILPASGNWQERISASLEALTQSKLIPGMKPCKTIPTKEQCTYFCDLPRACPTGLLCCSASCGNVCMPPKGHGNRRSSHKISNFLFTAEPIKQQ", "length": 108 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287AF12-1", "protein_name": "Large ribosomal subunit protein eL21", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MTNTKGKRRGTRSMSSSPFRKHGVVPLATYMRIYKKGDIVDIKGMGTAQKGMPHKCYHGKTGRVYNVTQHAVGTVVNKQVKGTILAKRINVHIVHIKHSKRGDNFLKRVKENDQKKKEAKEKVTWVQLKHQTAPAREAHFVRTNGKEPELLEPNP", "length": 155 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287AGK9-1", "protein_name": "DM domain-containing protein", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MDPDEMPTVPCCPLDSTTGLETGAPWGIEFGPRRAIRRCARCHNHGITDQIKDQEHLCLFQACECHKCVLFSEHCSILPAESALKTMQELHLKRQLTQGLIKSGTTSPKAHSHVKKSSIQTGVLSKLPRCSADRSGIGIFVSVLDSSTLEEATNNFTFQEVTQAPCPAQQAPKTSDQDSDSASLEWQRKLEAAEALLTLRESSQAPSGPTPLLQPSAAPAPAGERGLQPPSRSLRPRPASSISLPIGHVGCISLLS", "length": 256 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287AKK8-1", "protein_name": "G-protein coupled receptors family 1 profile domain-containing protein", "gene_name": "LOC100155397", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MDVRNHSIVSEFVFLGFTNSWEIQLLLFVFSFLFYSSSMMGNLVIVFTVTLDSHLHSPMYFLLANLPAIDMVFCSITAPKMIGNIFKKHKAISFCGCITQIFFTHAAGGTEMVLLIAMAFDRYVAKCRPHHYLTIINPRICLCFLVTSWIIGLIHSMAQLFFVVDLPFCDLNVLDSFYCDLPRLLRLACTDTQELQFMVTVNSGLLSMGSFVLLIISYIFILFTIWKHASGGSSKALSTLSAHITMVVLYFGPLIFFYTWPSPTSHLDKYLAIFDAFITPFLNPVIYTLRNKEMKVAMRRLFSHLVHYRNIS", "length": 312 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287AP00-1", "protein_name": "Olfactory receptor", "gene_name": "LOC110258730", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "SRHDLHCSLWQDNSMSVKRFAFARFSEVTEQCFLLFTLILLMFLASLTGNALIATAIWTNPVLHTPMYFFLANLSLLEIGYTCSVIPKMLQSLVSEARGISREGCATQMFFFAFFGISECCLLAAMAFDRYMAICSPLHYATRMSRGVCDHLAMVSWGVGCMAALGQTNYIFSLDFCGPCEIDHFFCDLPPILALACGDTSHNEAAVFVAATLCISSPFLLIIASYGRILAAVLSMPSPEGRRKALSTCSSHLLVVTLFYGSASVTYLRPKASHSPGIDKLLALSYTVVTSMLNPIIYSLRNKDVKAALRRTLGKKKVLAHR", "length": 322 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287ARD5-1", "protein_name": "Olfactory receptor", "gene_name": "LOC110258934", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MDGKNQTALSEFIILGFSNLNQLQFLLFTIFFLTYICTLGGNTFIILVTVVDPRLHTPMYHFLGNLAFLDICYTTTNVPQMMAHLLSEKKSISYGGCMAQLFAFIFFVGSECLLLAAMAYDRYIAICKPLRYSVIMNKVLYSQLAASCWSGGFLNSAVHTVLTFRLPFCGNNQINYFFCDIPPLLVLSCGDTSVNELALLSIGVVIGWTPFLCIVLSYLYIISTILRIRSSKGRQKAFSTCASHLTIVLFYYGSAIFTYVRPISSYSLEKDRLISVLYSVVTPMLNPIIYTLRNKDIKEAMKAVGRKWQLPLLSFDV", "length": 317 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287AT12-1", "protein_name": "Olfactory receptor", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MLSFNRTGVSHTVFYLLGIPGLEDQHLWISIPFFISYVTALLGNSLLIFLILTRRSLHEPMFLFLCMLAGADLVLSTCTVPQALAIFWFRAGEISLDRCITQFFIIHCIFMSESGILLVMAFDRYVAICYPLRYTTILTHTLIGKIGVTIFLRSYCTVFPIIFLLKRLTFCRNNVLPHTGCEHIGLAKYACNDIRVNIWYGLFVIVSTLFLDILLIFVSYMLILRAVFHMPSQDARHKALSTCGSHVCIIILFYGPGILTTLAQRFGRHIPAHIHILLANVCVLAPPMLNPIIYGIKTKQIQEQVAHLFLKQK", "length": 313 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287AUC4-1", "protein_name": "G-protein coupled receptors family 1 profile domain-containing protein", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MERINKSHPEEFILLGFADRPWLELPLFIILPMYFFLTNLSFLDMCYTTSIVPQMLFHLGGSEKTISYLGCAVQLYFFHTMGGTECLLLALMSFDHYVAICKPLHYTLIMNRCTCILLVATVWLSGMTYAVSEATVTLHLPLCGHNTLDHLICEIPVLIKAPCGEKGTNELTLSVVCIFMLAVPLCFILASYASIGHAVFKIKSSEGRKKAFGTCSSHLIVVFFFYGPDISMYLQPPSSISRDLPKFMALFHGVVTPTLNPFIYTLRNKDVKGAWGNLVRSVFTSK", "length": 286 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287AXC2-1", "protein_name": "Olfactory receptor", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MEQNNGTEVNEFILLGFAGQHKSWLVLFIVFLGIYVVTLVGNIGMILLIKIEMLQNFVGTEQSISFIGCMVQLLIYGAFVTSDCYILAAMAVDRYVAICNPLRYPTVMSQRVCIQLLIGSYLIGFLNASVHVSFILPLNFCKSNKINHFFCDAPPILALSCSSIYFNVMLLAAFVGFNLTCTVLVVIFSYIFILAAILKISSAAGRKKAFSTCASHLTAVTLFYGTLSYMYLHHRTLESQEQEKLASVFYGIVIPMFNPLIYSLRNQDVREALKGVGKQCF", "length": 281 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287AY25-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100155405", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MAHTNESVVLEFVLLGLTNSWELQLFLFAIFSIVYVTSVLGNTMIIVIIASDSRLNSPMYFLLSNLSFIDICQSNFATPKMLVDFLVEHKTISFEGCMAQIFLLHSFVGSEMMLLVAMAYDRFIAICKPLHYSTIMSRRLCIIFVFISWAVGILHSVSHLAFTVDLPFCGPNEVDRFFCNLPLVIELACMDTYKVEILTLTNSGLISLGCFLALIISYTVILITVHRWSSSGSSKALSTLTAHITVVILFFGPCIYFYIWPFSRLSVDKFLSVFYTVCTPLLNPIIYSLRNEDVQSAMHKWRNHHVNSWKY", "length": 311 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287B1Z6-1", "protein_name": "Short stature homeobox", "gene_name": "SHOX", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MEELTAFVSKSFDQKSKESSGGGGGGGGKKDSITYREVLESGLARSRELGGSDSNLQDITEGSGHCPVHLFKDHVDNDKDKLKEFGTGRAAEGIYDCKDKREDVKSEDEDGQTKLKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKQENQMHKGVILGTASHLDACRVAPYVNMGALRMPFQQVQAQLQLEGVAHAHPHLHPHLAAHAPYLMFPPPPFGLPIASLAESASAAAVVAAAAKSNSKNSSIADLRLKARKHAEALGL", "length": 292 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287B9C9-1", "protein_name": "HSF-type DNA-binding domain-containing protein", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MAHAPSEIQGVSPKDESTGSESSITSPWCDNSITGDLDLRSQIEEKAFQALSEGSLMKEPCHTLCASEPDGDNDFPPLPFPRKLWEIVESDRFKSIWWDENGTSIVINEERFKKEVLERKAPFRIFETESMKSLVRQLNLYGFTKLRRNFQRPASLANILAEDNEVSAWNKLQFYHNPNFKRGCPHLLVRMKRRVRVKNASPVSASVLQGCSKKRSRTGGDVDNHNSDVAAETRGEDAFSASTNLNVPLIRWRSMSQRISNTTTPTRSGLSSPSSPSFRPPGQIAMAQHAIFSQLTTFHMHSQSSYSPASGHIVNFITTTTSISQYRCISYFPSGYFGLRVEPSPLPTRYQNISPTECPVSNPQPAAHPWFPMPMATDTSAASLSRPNPQSSSVSEHHPNYH", "length": 402 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287BB76-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100157512", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MAHTNESVVLEFVLLGLTNSWELQLFLFAIFSIVYVTSVLGNTMIIVIIASDSRLNSPMYFLLGNLSFIDICQSNFATPKMLVDFLVEHKTISFEGCMAQIFLLHSFVGSEMMLLVAMAYDRFIAICKPLHYSTIMSHRLCIIFVFISWAVGILHSVSHLAFTVDLPFCGPNEVDSFFCDLPLVIELACMDTYKIEILTLTNSGLISLGCFLALIISYTVILITVHRWSSSGSSKALSTLTAHITVVILFFGPCIYFYIWPFSRHSVDKFLSVFYTVCTPLLNPIIYSLRNEDVQSAMHKWRNRHVNSWKY", "length": 311 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287BC21-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100152520", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MDGKNQTALSEFIILGFSNLNQLQFLLFTIFFLTYICTLGGNTFIILVTVVDPRLHTPMYHFLGNLAFLDICYTTTNVPQMMAHLLSEKKSISYGGCMAQLFAFIFFVGSECLLLAAMAYDRYVAICKPLRYSVIMNKVLYSQLAASCWSGGFLNSAVHTVLAFRLPFCGNNQINYFFCDIPPLLVLSCGDTSVNELALLSIGVVIGWTPFLCIVLSYLYIISTILRIRSSKGRQKAFSTCASHLTIVLLYYGSAIFTYVRPISSYSLEKDRLISVLYSVVTPMLNPIIYTLRNKDIKEAMKAVGRKWQLPLLSFDV", "length": 317 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287BF45-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100513333", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MRNRTITTFILLGLTDDPELQVLIFIFLFLAYMLSLTGNLTIITLTFVDSHLKTPMYFFLKNFSFLEVSFISSCIPRYLYSIATGDKIITYNACFIQVCFTDLCGITEFFLLAAMSYDRYVAICKPLHYVTIMSSRVCGILISSCWMAGLCVLIPPLSLGLNLKFCDSNRLDHFGCDAFPLVKISCSDTWPMEQTVIICAVLTLNMTLTCVVLSYAYIIKTIFRFPSDQQRKKAFSTCSSHMIVVSITYGTCIFIYMNPTAKGEVTIKKVVSLLIFSVSPTLNPFIYTLRNNQVKRAFKDSIKRIALLSTR", "length": 311 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287BGE2-1", "protein_name": "Olfactory receptor", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MENNQSWIAEFILVGFQLSEEMELFFFIIFFLLYIFNLLANGMILGLICLDPRLHSPMYYFLTHLAVTDISYASSNLPNMLENLVKHKKTIPFVSCTLQMLFYLAFASVECLILVVMSYDRYVAICHPLQYTVIMNWKLCTVLAIISWACGFFLALVQVSLFLRLPFCGPQKVNHFFCEIRSVLKVTCGETWINKIFLFADGVFILVTPISLMLVSYVRILWAILKIQSKEGRKKAFSTCSSHLCVVGFYFGIAMMVYLVPDDSHQQEEQQKILFLFYTFFNPLLNPLVYSLRNAQVKAAFHRIFQKNRTM", "length": 311 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287BIM6-1", "protein_name": "Histone H2A", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MPGKRSRRKSPGRQGRTCARTTRAGLSASVSHMERLLREGPYAQCLSSSARVFLAATIEYLTARVLELAGDEAQIVGRRCITPELVAMAVHNNALLSAFFGTLAISQVAPTQE", "length": 113 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287BK27-1", "protein_name": "Olfactory receptor", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MVTEFIFLGLSNSQELQTFLFVFFLVFYVGIVFGNLLIVLTVMIADFFRKCKVISFKGCLAQIFLLHFFGGSELVILIAMAFDRYVAICKPLRYTTIMSSNVCVGIVAAAWGTGFLHSVSQLAFAVNLTFCGPNEVDSFYCDLPRVIKLSCTDTYRLDIMVIANSGVLTVCSFVLLIISYTVILVTIQHLPSQKSSKALSTLTAHITVVLLFFGPCIFIYAWPFPIKSLDKFLAVFYSVVTPLLNPIIYTLRNKDMKTAMKRLRKWNMNSRIKP", "length": 274 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287BKA6-1", "protein_name": "Olfactory receptor", "gene_name": "LOC110259008", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MTFNCSLWQDNSMSVKRFAFARFSEVTEQCFLLFTLILLMFLASLMGNALIATAIWTNPVLHTPMYFFLANLSLLEIGYTCSVIPKMLQSLVSEARGISREGCATQMFFFAFFGISECCLLAAMAFDRYMAICSPLHYATRMSRGVCVHLAMVSWGVGCMVGLGQTNYIFSLDFCGPCEIDHFFCDLPPILALACGDTSHNEAAVFVAATLCISSPFLLIIASYGRILAAVLSIPSPEGRRKALSTCSSHLLVVTLFYGSASVTYLRPKASHSPGIDKLLALSYTMVTSMLNPIIYSLRNKEVKVALRRTVGKKKVLAHR", "length": 320 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287BKW4-1", "protein_name": "Olfactory receptor", "gene_name": "LOC110258932", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MEGENQTVLFEFIILGFSNLKELQFLLFTIFLVTYICTLGGNSFIILVTMTNLHLHTPMYFFLENLAFLDICYTTTNVPQMMAHLLSEKKSISYLGCMAQLFAFIFFVGSESLLLAAMAYDRYIAICKPLRYSVIMNKVLYSQLAASCWSGGFLNSAVHTVLAFRLPFCGNNQINYFFCDIPPLLVLSCGDTSVNELALLSIGVVIGWTPFLCIVLSYLYIISTILRIRSSKGRQKAFSTCASHLTIVLLYYGSTIFTYGRPISTYSLEKDRLISVLYSIVTPMLNPIIYSLRNKDIQEAMQVMGRKWKASSSLSFDV", "length": 318 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287BLZ6-1", "protein_name": "G-protein coupled receptors family 1 profile domain-containing protein", "gene_name": "LOC110258167", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MAGGKNSTTITKFILLGFSEFPKLTAVLFSVFLRISLMTVSWNMGLIMLIRMDSHLHTPMYFFLSNLSLLDICYVSTIAPRMLSDFFKKYKFISFMGCTMQYFFSSLALTECCLLAAMAYDHYAAICNPLLYTAIMSPTLCVQMVAGSCVTGFFGSFIQLCALFQLHFCGQNVTNHFFCDLPQLLILSCSDTFFFQVMTSVLTVIFGLTSVLVIIISYGYIIATILKITSSEGRSKAFNTRASHLTAVTLFFGSGIFIYMYPNSGDSLSQNKLVSVLYTVIISMLDPLIYSLRNKEIQDSLSRWRKTIFSWCY", "length": 313 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287BNL4-1", "protein_name": "G-protein coupled receptors family 1 profile domain-containing protein", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "TVLNARNVSTPKVFILLGFSDHPWLEMPLFIIVLAAYIRTLVGNISIIVVSRVDPNLDSPMYFFLSNLSFLDLCFTTTTIPQLLLNLWGPDKSISYGGCVTQFYMFHFWGATECIFLAVMSMDLQAICKPLRYPVIMHQQLCIFLVVMAWLSGLVNSLLQSSLTIQLPLCGNNKVDDFLCEVPVMIKMSCTDTTFNVAMLSIVGTFYSLVPLSLILVSYGFIVATVLRIQSSEGKKKAFNTCSSHTIAVSLFYGPVISMYVQPSAANSQDKNKLMSLFYSLVTPMLNPFIYTLRNKDMKGAMMRLLVSLYHQRRG", "length": 315 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287BSD4-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100525471", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MENENSTVVAEFIFVGLTQSRNIQLLVFVLILIFYLIILPGNFLIILTIRSDPGLTAPLYFFLGNLAFLDASYSFIVAPRMLVDFLSEKKVISYRGCITQLFFLHFLGGGEMLLLVVMALDRYIAICRPLHYSTVMNLRACYALLVALWLGGFVHSIIQVALILHLPFCGPNRLDNFFCDVPQVIKLACTDTFVVELLMVFNSGLMTLLCFLGLLASYAVILCRVRGSSSEGKTKAMSTCTTHIIVIFLMFGPAIFIYTRPFRAFPADKVVSLFHTVIFPLLNPVIYTLRNQEVKTSLKRLLNQQLA", "length": 307 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A2R8VHJ9-1", "protein_name": "Predicted gene, 36245", "gene_name": "Gm36245", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSTKNEEQNEDQSEGVVIPHIQDHHCLAILAFCFFFPLGYLAYRSSCKTRTYIEQKEYEKAKATSRCTFAFVLSSIAGGSIIFFCLFSRLFFM", "length": 93 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A3L7ICH5-1", "protein_name": "Cytochrome c oxidase subunit 7A2-like, mitochondrial", "gene_name": "LOC100756118", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MYYKFSGFTHKLAGAWALESYSPQGLKPVASTEAPPIVFATPTKLTSSVTAYVYAGKNKVPELQKFFQNFFHLKRGLPDQMLYRTPMALTVGGTIYCLSALYMASQTPNK", "length": 110 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0A3Q1LL21-1", "protein_name": "BTB domain-containing protein", "gene_name": "LOC112445444", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MGPLNSRNLQCRESGTGELQQPEAQAGPSYVSGSRKRKQSTGPSLGPESEMSHNQEEDLQQVVCTRQGKKVKIKSEYAYQTLFLNGETSDIKIRALGKVWCLHKRFLCQSDYFATMFRDSGKECHKDIIDLEINDQNINVESLQFVLGSLYRNEYVLIKPLQVPRVLATACLLQVEDLIQQCDKTMKETINVKTVCSFYVAAETYGLHSVKTGCFEWLLHNLMTHPSVELYKKLSTDLMNLVISSSNLFVMQKEIDIYTTLKQWMFLRLNPGWKGTMKQLLVNANNWFSRHKEHDGSISFLETKQGIVFQPVFKNLRFQHIICDLASTKVIEQDALIPSEWLSCVYKRQWYTLLRAQQYREIGPRDITETELEEYSMRCGKRIVRDGTYAWKWSGYNFGVHLYVVFTSHFIIFKRHAFSQPYDGSICLQPQRNIAFRLTLVYFGSSGKLSFRKTTGYKILTFEKDEEQMVMKLDSVALSFPLYIFCNFLFISLENPGN", "length": 498 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "A0A3Q1LLV6-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MNLFIYVLLLSIWTSSCLDRNESNGSATAVTTHAEFKQTKLQELRRRLLIIIIGTLITGYMVTCTCFLHYSCDSEEAHKATKDKKEDITIKASRSSKISFTDSKSPTAGLGDPERQSVVSRIDKSSGPSSPRKVPSSAEKLVRPSSQKKPSKPSAPKKVLGSPPQEKLHRTRSPKKAHRQAHAHKLVSQVSPSYPEKAIKPTWPPSLQCRVKPTKTPLPYPKNQSFPEHSSADKLTKRQRYLKLKCPASAGRAEILSRPQPVKFCRCYKEKCLVCRAVSEPFITHVSEANKKHVPVPLFSRELKHFYKSYKKKQPKYNTLYGNMSDSDITTYNSDGESDREVIIMCNIKCKEDIYKNSPNN", "length": 361 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "A0A3Q1LUU6-1", "protein_name": "Guanylyl cyclase domain containing 1", "gene_name": "GUCD1", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MTGPRCRRKQRPSGRPGPRGTRAPQHPTPDAGWTARRAAGAAGAEARGRDLPPQRKPAKPTAPGKGRPERGECPRRADRGGGDPEERAGGRPAWGPGAGRGGAWGRSRLPPLLPPGRWCWRPGKPARAGRALSSPVDARAAAGAGPGPWEPRAARVMRTEVDAEAAGPPLEPDEPTQSLSIQDQETAFLLEDSCQLKPGQPLPGRPWPSGDFVQLPVPIIQQLYHWDCGLACSRMVLRYLGQLDDAEFEQALQELRLTRSIWTIDLAYLMRRFGVRHRFCTQTLGVDKGYRSQSFYRKHFDTEETRVNQLFAQAKTCKVLVEKCRVSVQDIQAHLAQGHVAIVLVNSGVLRCDLCSSPPKYCCFTPSGPRCFCRSPDYQGHFIVLRGYSRAAGCVFYNNPAYADRMCSASISNFEEARTSYGTDEDILFVYADS", "length": 434 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "A0A3Q1M0W3-1", "protein_name": "IF rod domain-containing protein", "gene_name": "LOC787600", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MTCGSACFSSRSGVRSSSSCVTTQRYAPGRTFSCVSACGPRPSRCCITAAPYRGVSCYRGLTGGFSSRSVCGGSRAGSSSRSFGYRSGGPSPPCITSVSVNQSLLKPLNLEIDPNAQRIKHQEKEQIKSLNSKFAAFIDKVCFLEQQNKLLETKWKFYQNQRCCESNLEPLFNGYIETLRREAERVEADTGRLASELNSLQEVLQGYKKKYEEEVALKTTAENEFVKIKQEVNRAYVLKGDLEANAHSLVEEVGFLKTLYEEELRVMQAHISDTSVVVKMDNSRYLNMDSIVAEIKAHYDEIASRSRAEAESWYRSKYEEIKATVIRHGETLRRTKEEINELNRLIQRLTAEIENAKSQNSKLEAAVTQAEQQGEAALNDARGKLAGLEKTLQKAKQDMACLLKEYQEVMSAKLGLDIEIATYRRLLEGEEQRLCEGISAVNVRVSSSRGGVVCGDLSATRTCGIGSYGVGACGSSCKKC", "length": 480 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "A0A3Q1MFB0-1", "protein_name": "Uncharacterized protein", "gene_name": "LOC112441459", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MNLFIYVLLLSIWTSSCLDRNESNGSATAVTTRAEFKQTKLQELWRRLLIIVIGTLITGYMVTCTCLLHYSCDSEEAHKAAKDKKEDITIKASRSSKISFTDSKSPTAGLGDPERQSVVSRIDKSSGPSSPRKVPSSAEKLVRPSSQKKPSKPSAPKKVLGSPPQEKLHRTRSPKKAHRQAHAHKLVSQVSPSYPEKAIKSTWPPSLQCRVKPTKTPLPYPKNQSFPEQSSVDKLTKRQRYLKLKCPASAGRAEILSRPHPVKFCRCYKEKCLVCRAVSEPFITHVSDANKKHVPVTLFSRELKHFYKSYKKKQPIYNTLYGNMSDSDITTYNSDGESDREVIIMCNIKCKEDMFKNSQNN", "length": 361 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "A0A3Q1MI36-1", "protein_name": "non-specific serine/threonine protein kinase", "gene_name": "", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MGSSSGSKAEFIVGGKYKLVRKIRSGSFGDMYLAINITNGEEVAVKLESQKARHPQLLYESKLCKILQGEVGIPHIRWYGQQKDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMMGRIEYVHTKNFIHRDIKPDNFLMGIGRHCNKLFLIDFGLAKKYRDNRTRQHIPYREDKNLTGTARYASISAHLGIEQSRRDDMESLGYVLMYFNRTSLPWQGLKAATKKQKYEKISEKKMSTPVEVLCKGFPAEFAMYLNYCRGLRFEEAPDYMYLRHLFHILFRTLNHQYDYTSDWTMLKQKAAQQAASSSGQGQQAQTPTGF", "length": 325 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "A0A3Q1MQ28-1", "protein_name": "Ig-like domain-containing protein", "gene_name": "", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "KEQVLQPTTVVSLEGAVAEISCNHSVSDVYDFFWYLHFPGFAPRLLIKGLGPSQQGRYNMTYERFSSSLLILQVQTADAGVYYCALRYTEAGHP", "length": 94 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "A0A3Q1MT47-1", "protein_name": "Uncharacterized protein", "gene_name": "LOC112444909", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MLGCEGGKRPLKPPKKQAKETDEEGKAFKHKQKEEQKTLEGLKGQIMGKVPLATGGIKESGKQ", "length": 63 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "A0A3Q1MUP8-1", "protein_name": "E3 ubiquitin-protein ligase", "gene_name": "LOC100336539", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MSRLTERALPTGTSNGAPSSRRAPVLTGTTVSNNDLASLFECPVCFEYVLPPITQCKSGHLVCGNCRPKLTRCPTCRVPLTSIRNLAMEKVANLVLFPCKYTSSGCGKTMPPTEKADHEEHCEFRPCRCPCPGTSCGWQGSMDAVVPHLMQHYNESIITLRGEVVVFLAVNINLAGTLEWVMLQSCFGFHFLLVLEKLEIYDGHQKFFAVVQLIGTREQAENFTYQLELNGNRRRLSWEATPLSIHEGIATALINSDCLIFDSEVAELFAENGNLSIDVTISMC", "length": 284 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "A0A3Q2TUK0-1", "protein_name": "Uncharacterized protein", "gene_name": "LOC121109925", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MEQQGHGERGNWQTKVWKTVALVLVTVAVASFGVYCVGGLVEGIKTTAGVTARLVRRDGEIVSLDEELAKVQRQLHVLQWRARDITERALHEALRRTELPGFTGEAVQKIIHQVLEKLEESPFQMTNYASKTSGAAIVRSKTSPSWIGSGRVFWQSLPLVAYMRPPEVILEPDNHPGNCWPFPGSQGHVFIKLPVAVFPTAVTINHGVPAAAYHADSISSAPKDFAVYGLQEEDDEKGTLLGEFIFMPGQAPGQTFQLKNEHSAFIKYVRLQVLSNWGHPEYTCVYQFRLHGDPAPDGDARGKLSA", "length": 306 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A3Q2UEY0-1", "protein_name": "Mab-21-like HhH/H2TH-like domain-containing protein", "gene_name": "LOC124418381", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MALVLVLALLVRALIVSGSDHAVMLERVQQHEKEQRNGEQSWVDMPALLFTLLHYWKIWLCTGLFVFLFWNMWRSLKRKQHEEGGQQEQQEREEQVEEVEPEEQQEQVEQEEQLERVEELERVDQVEHVEQEEREDQGEQVQQEEQVEEVEREDEEDEYFYHSALTRYIARRAWEKMQGRATKCVLVEELMRDLLQTFTFVCPNSFYPVLQPAIGVGSAFEGWSPCEEDIVYHLLVPIKAPHGHVFHPELGEEGDMLARNSRIRVELVCMCTREQQLGDVLCFLHHSQEELSQNQQPSLLQTLCTGSYLDVQKTAAWFNKQVPRIWRLTHRAHRYGLKVLPSSRSCKLQVTDTSSGEKVHVELLFGVQQGNLDIFLSSQNAEAVFTPSTTWPQSCAVAERKYFEYVARTAGPNSCHLVCLRLFAHILVGMGFSSYTIKTLLLHLLAIIPLEDWRRRHFLSRLENLLQYLQYCLNDKLLNHFLLGNATMPDEVVLPQAFQTASPLNLFQHLEQDPDAHSRALRDFKELKDRLFRLLLFGR", "length": 539 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A494C0N9-1", "protein_name": "Protein FAM246B", "gene_name": "FAM246B", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MATPGRPWAQARSAYRASEVLRRVTGRRRDPGPQSNGPGREDARAPGRLARLLRQLRAEAASRSEVPRLLKLVERAGAGAAGAGERTGAHSRGSVCSVCGEPRGRATYPAGVLEVSERRLQEGLAAVREELGAEIEALRAELRAELDALRALLPPPPPSPPARREPRAVPRAAPRGPTLLRTLGTVSALVAASRPADDAPDGPAECGAHRAPARKNHKKMPVPPGAPQGGGD", "length": 232 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "A0A494C0Z2-1", "protein_name": "Speedy protein E13", "gene_name": "SPDYE13", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MGQILGKIMMSHQPQPQEERSPQRSTSGYPLQEVVDDEVLGPSAPGVDPSPPRRSLGWKRKRECLDESDDEPEKELAPEPEETWVAETLCGLKMKAKRRRVSLVLPEYYEAFNRLLEDPVIKRLLAWDKDLRVSDKYLLAMVIAYFSRAGLPSWQYQRIHFFLALYLANDMEEDDEAPKQNIFYFLYEETRSHIPLLSELWFQLCRYMNPRARKNCSQIALFRKYRFHFFCSMRCRAWVSLEELEEIQAYDPEHWVWARDRAHLS", "length": 265 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "A0A4X1TRA8-1", "protein_name": "Small ribosomal subunit protein eS19", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MPGVTVKDVNQQEVVRALAAFLRKSGKLKVPEWVDTVKLVKHKELAPYDENWFYTRAASTPRHLYLWGIAGVGSMTKTYRGHQRDRVMPSHFSRGSKSVAHRLLQAREGLKMVEKDQDGGRKLTPQGQRDLDRIAGQVAAAKKKH", "length": 145 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A4X1TY10-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100627324", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MENYNQTSIYFILLGLFPSSRIGMFLFIIIVLIFLIALFGNFSMILLIFLDNNLHTPMYFLLSQLSLMDLTYISTIVPKMAYNFLFNDKSISFIGCGIQSFFFLTLAGAEGLLLAAMAYDRFVAICFPLHYHIRVSKRICVLMIIGSWIMGSINSFAHTAYALNIPYCQSRAINHFFCDVPAMLTLACIDTWVYESTVFVSTTIFLLVPFTCIAFSYGRILLVVHHMNSTEGKKKAYSTCSTHLTVITLYSAPFAYTYLRPKFLRTPTEDKVLAMLYTIFTPMLNPIIYSLRNKEVMGALRRVIQRICSVKM", "length": 312 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A4X1U699-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100524234", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MRRENQSSVSMSKFVLVGLHIWPEQQGMVFALFLGMYLTTVLGNLLIILLIRLDPRLHTPMYFFLSHLAFSDVSFSSVTVPKMLMNMQTQDQSIPYAGCVTQTYFFIFFSCIDNLLLAVMAYDRYVAICHPLRYAIIMKEELCLCLLAGSWLLSCAYALTHTLLLAQLSFCADNIIPHFFCDLASLIKLSCSDTSLNELVIFSLGPAVFIFPLSGILVSYGCIVVSILSVHSPKGIFKALSTCGSHLSVVSLFYGTSMAVYLSSSSGQSHDKDTIASIMYTVVTPLLNPFIYSLRNRDMTLALQILFRNSNLLAK", "length": 315 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A4X1VK25-1", "protein_name": "Elongin-C", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "RSYGGCEGPDASYGKLIASDKFIVKREHVLTSGAIKAMFSSPGQFAEKETDVVNFRETPSGIPSAALWKVCMYLPHKVCYTSNTSEIPEFPINSEFPIAPDIALEPLMAANLLDC", "length": 115 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A571BD55-1", "protein_name": "BTB domain containing 35, family member 26", "gene_name": "Btbd35f26", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGKTWCLHKVFLCQSVYFANILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A571BF50-1", "protein_name": "WD repeat domain 88", "gene_name": "Wdr88", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MTKDNEEILNSPDQVRKGSPDVKKKKKIKKKRVKPKGDLDSKKLDFVEDSWWKGSLKNKNLDFAEYNWVLVDNRRVSVDSRKSSADSKRGSADSKRGSADSKRGSADSKRGSADSKRGSVDSKRGSVDSKRGSVDSKRGSVDSKRGSVDSKNRFSPKKMDFSEDREISQPTFLRAQQSKVPWALMRALGLFKLSLPDIRRYYNLTSHDPLALDKDRQPREKSHMATVKKFWGNQQPLSKIPYKILIGHDHIVSSCHFCMNDTRFLSSSYDCSVKLWDAEDGTVIWDFEPRPKAPVLECSITADNRRIVASSYDKTVRAWDVETGQLLWKVRHDTFVVCCKFSPNGKFVLSALDVDRGIYLMDPENITTVIHMKDHHQRSITSCCFDPDSQKVASVSMDRCIKIWDITSRTTLFTIPKAHYNAISDCCFTSTGHFLCTSSWDKNIKIWNVHTGEFRNRGACVTLMKGHEGCVSSCCIARDSSFLISGGFDKTVAIWDVGGGYRKLALKGHEDWVTDVAISNNKKWILSASKDSSMRLWNIEEIDKIPLVSENKKAMGLKVRQVGIR", "length": 565 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A571BG45-1", "protein_name": "BTB domain containing 35, family member 25", "gene_name": "Btbd35f25", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGLQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGRTWCLHKVFLCQSGYFANILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A571BG86-1", "protein_name": "BTB domain containing 35, family member 8", "gene_name": "Btbd35f8", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLSCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGRTWCLHKVFLCQSGYFANILKGTWRESRHGVINLIIKNEDIDTRSLHFVFGALYRDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A5G2QG78-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100523228", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MTRGENTTNITDFVLLGFSDFPQIRAALFVVFLVIYILTLTWNLCLIVLIRMDSHLHTPMYFFLRNLSFIDICYVSSTAPKMLYDFFQAKPTITVVGCAIQYFVCSTMGLSECGLMTVMAYDRYAAICNPLLYSSTMSPSLCGRMVLGSYMAGLSASLSQVCAMLQLHFCGPNVIHHFFCDMPQLLVLSCSDTFFLQLLTLVLTVIFGILNALVIMMSYVYIVISVMKITSTKGWSKAFNTCASHLTAVTLFYTSIIFVYLSSSSGGSSGLDRFAAVFYTVVIPMLNPLIYSLRNKDIKDAWKRLKKRKECC", "length": 312 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A5G2QIN7-1", "protein_name": "ADAM metallopeptidase domain 7", "gene_name": "ADAM7", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MSNSHYLSALFSREFLASNYSETYYSTKGEEVTTHPQIMDHCFYQGSIIHEFDSAASISTCSGLRGFFRVNDQRYLIEPVKYSDEGEHLVFRYNPKVQHAANYSCTELNFTRTAVLKDNTKSMEDSKMESIEKEKHIELFIVADNNVYHRNPNSKVRNRVWGMVNFVNMIYKTLDIHVTLVGLETWTNGDKIEIDSNIETTLKRFSAWQEIILKKKKNFDHVVLLSGKWLYTSAQGTSYPGGMCLPYYSSSVVKDLLPDLNTIASRMAHQLGHSLGMKHDDYPCTCTLGKCVMDSGGSIPALKFSKCSRTQYQQYLKDFKPTCMFDIPFSDKLSDYPYCGNKKLDDGEECDCGPVQECTNPCCDARKCMLKPEFTCAEGECCESCQVKKAGSLCRPAKDECDFPETCTGHSPACPKDQFQVNGFPCKDAKGYCFMGNCPTRDDQCSELFDNEAKDSSDICYKMNKNGNKFGYCKNEEQTLIPCEEKDVKCGKIFCTGGKHASILGEEKVYHLKKPLTQNVTECKTFFLYHKSKDFGLVAPGTKCGEGKVCSNSECVTIEKAYNSTDCPSPCNENAVEDGDLGCQCEGVQASVDWEETLNVTNISILVVVLILVIIGVLSAVLLIRYQKCIKLKQVQRPPSEALGVENKGYTGDEQQTRTEPILPDIHPLHRRTAESLARLPTSFSSPHYITLKPASKEPRGTADPNPSAKVSLKLDIQNGCASLS", "length": 725 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A5G2QM02-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100623139", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MTGGENTTNITAFVLLGFSDFPHIRAALFVVFLVIYILTLTWNLCLIVLIRMDSHLHIPMYFFLSNLSFIDICYVSSTAPKMLYDFFQAKPTITVVGCAIQYVVFSTMGLSECGLMTVMAYDRYAAICNPLLYSSIMSPSLCGRMVLGSYMAGLSATLSQVCAVLQLHFCGPNVIHHFFCDMPLMLGLSCSDTFFVRVLTAVFTVIFGIINALVIMMSYVYIVISIMKITSAKGWSKAFNTCASHLTAVTLFYTSGIFVNLNSSSGGSSGLDRFAAVFYTLVIPMLNPLIYSLRNKDIKDALKRLKKRKECC", "length": 312 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A5G2QUE5-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100524011", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MRRENQSNVSKFLLLGLPIQQEQQGMFFALFLGVYLTTVLGNLLIILLIRLDPRLHTPMYFFLSHLALTDISFASVTVPKMLMNMQAQDHSISYAGCVTQTYFFMFFACIDNLLLTVMAYDRYVAICHPLRYTIIMREELCICLLAGCWLLSCAYALTHTLLLAQLSFCVDNIIPNFFCDLAALLQLSCSDTSLNELVIYTSGAAVFIFPPSGILVSYGRIGISILRVPSTKGICKALSTCGSHLSVVSLFYGTIMALYFSPSFGQSHYKGIIASVMYTVVTPMLNPFIYSLRNRDMTLALEILIRNKNLFTT", "length": 313 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A5G2QWK6-1", "protein_name": "Calmodulin 3", "gene_name": "CALM3", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "VSAEREEEGVALKFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEVTASPVLGPAREGPRASAPSWGGKQPLAIACNQPRRSSGFSWDLPSFENLLSSTLWSPASGDGRGVEHSGRPS", "length": 214 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A5G2R7Y6-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100524140", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MGQRNQTSSLADFILEGLFDDSPAHAFLFSLTMVVFLVAVSGNTLTILLICADPRLHTPMYVLLSQLSLMDLMHVSTTIPKMAINHLSGTKSISFVGCATQYFLFLSLGGAECLLLTFMSYDRYVAICHPLRYAVLMNRKVGQMMAVMSWLGASVNSLIHTVILMHFPFCGHRNIHHFYCEFPAVVQLVCGDITVYEIAVYIGDIVLLLLPIVLISASYVFILHSVIHMHSAGGKRNAFATCSSHLTVVSLWFGACIFSYMRPRSQRTPLQDKVGSVFYTIITPTLNPLIYTLRNKDIAKALKRVLGREMITQNPKVRLP", "length": 320 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A5G2RGH3-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100524855", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MGRRNQTSSLADFILEGLFDDSPAHAFLFSLTMVVFLIAVSGNTLTILLICADPRLHTPMYVLLSQLSLMDLMHVSTTIPKMAINYLSGTKSISFVGCATQYFLFLSLGCAECILLTFMSYDRYVAICHPLRYTVLMNRKVGQMMAVTSWLGASVNSLIHTVILMHFPFCGHRNIHHFYCEFPAVVQLVCGDITVYETAVYISDIVLLLLPIILISASYIFILHSVIRMHSAGSKRNAFATCSSHLTVVSLWFGACIFSYMRPRSQRTPLQDKVGSVFYTIITPTLNPLIYTLRNKDIAKALRRVLGREMITQNPKVRLP", "length": 320 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A668KLA6-1", "protein_name": "Predicted gene, 52955", "gene_name": "Gm52955", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MNSSSEHCNVSDWLRLEATVKASVYVVAFSITTSLTIVIIAIVSQSLQLRKEVRLVLLCHHLLCISSYCGLGVVFQGMGALLANSPLLLCWLVFGAQLSVGEGILLTLTLMALNTYLAICYPLNSPSFVDSAKYRILAGTWTTVILKNVGLFLIEGTSPTPASVFQSAPLCPVILNGMPARVIGMFSLAFLLSVILVSYCLIYREGKRAGHFNKSNIKARRTVLVHLLQISLHVIPTLIIIGLGKQCGVFFFALNLALFGIFAFAQCFNPLVYGLHNRDLQSKLYPSLCCQKKLLP", "length": 296 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A668KLA7-1", "protein_name": "Predicted gene 7582", "gene_name": "Gm7582", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MNSSSEHCNVSDWLRLEATVKASVYVVAFSITTSLTIVIIAIVSQSLQLRKEVRLVLLCHHLLCISSYCGLGVVFQGMWALLANSPLLLCWLVFGAQLSVGEGILLTLTFMALNTYLAICYPLNSPSFVDSAKYRILAGTWTTVILKNVGLFLIEGTSPTPASVFQSAPLCPVILNGMPARVIGMFSLAFLLSVILVSYCLIYREGKRAGHFNKSNIKARRTVLVHLLQISLHVIPTLIIIGLGKRCGVFFFALNLALFGIFAFAQCFNPLFYGLHNRDVQSKLYPFLCCRKKLLP", "length": 296 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A668KM50-1", "protein_name": "RIKEN cDNA A930007A09 gene", "gene_name": "A930007A09Rik", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLSLSELPQKNTDLAEMQSGPLGRCSHFFWLGVAFDAVGVAVLFTGVFANLLFYDMLLYLGSIIIFVSLLWWISWYTGNIEALPEDPLRGTSPRESGVHRSGSRRFSLTLRSVSDTFQRIRRRRRRRLHPRVVQRISSISSTDPGQLERNCDARTSGGRALFRSAKPEAVLNQFSRVQTSKSLPLGIVHTGLSICTSRSQPVFSVTSQTYPLASDSNSQMAMSSDSHVYLDSHSQEHSKISVASQIYPLEREESQSHLLVIPDSLSMVPVTSQSQILPSVSSESCVPLGPHSQGRSKISVATQIYPLEREESQSHFLVIPDSLSMVPVTSQSQILPSVSSESCVPLGPHSQGRSKISVASKIYPLEREESQSHLLVIPDSLSMVPVTSQSQILPSVSSESCVPLGPHSQGRSKISVATQIYPLEREESQSHFLVIPDSLSMVPVTSQSQILPSVSSESCVPLGPHSQGRSKISVASKIYPLEREESQSHLLVIPDSLSMVPVTSQSQILPSVSSESCVPLGPHSQGRSKISVASQIYPLEQEESQSHFLVPMPSDSFPVVPMTSQSQIQGSLAQQSHLQNLPLASQTPETDKASKSHTLAKGVPGVPPGSAQTQHPQASLAQTSQISSPVRKVPKN", "length": 636 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A8C2LDI6-1", "protein_name": "Large ribosomal subunit protein eL33", "gene_name": "LOC100774916", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MSGRLWCKAIFAGYKRGLCKQRGHTALLKIEGVYARAETEFYLGKRYAYVYKEKNNTVTLRCKPNKARVIWGKVTKAHGNSGMVHAKFRSNLPAKVIGHRIRVVLYPSRI", "length": 110 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0A8C2LMV8-1", "protein_name": "Large ribosomal subunit protein eL21", "gene_name": "LOC100755948", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MTNTEGKRRGTRYMFSRPFRKSEVVPLAMYMRIYKKGDIVDIKGMDTVQKGMPHKCYHGKTGRVYNVTKHAVGIIVNKQVKGKILAKRINVQMKHIKHSKSRDSFLKQVKENDQKKKEAKEKGTWVQLKRQPVPPREAHFVRTNGKEPQLLEPISYEFMA", "length": 160 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0A8C2LSR6-1", "protein_name": "Large ribosomal subunit protein uL5", "gene_name": "LOC100751955", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MSQDEGEKENPMWELHICKLCLSICVEESRDRLTRAAKVLEQLKGETPVFSKARYTMRSFGIRSNEKIAVQCTVHGTKTEEILEKGLKVQEYELWRNNFTDTGNFGFEIQEHIDLAIKYDPSIRIHGLDFYVVLGRPGFTIADKHRTGCIGAKHRISKEEAMRWFQHKYDGIILPGK", "length": 177 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0A8C2LUM6-1", "protein_name": "Tubulin alpha-1C chain-like", "gene_name": "LOC100757824", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MCECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETDTGKHIPRVVFVDLEPTAIDEVRTGTYRQLFHPEQLITGNEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSRFTSLLMEWLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYPTPLPE", "length": 288 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0A8C2LZU4-1", "protein_name": "Glia maturation factor", "gene_name": "Gmfg", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MSDSLAVCEVDPELKEKLRKFRFRKETDNAAIIMKVDKARQMVVLEEEIQNVSPEELRLELPERQPRFVIYSYKYLHDDGRVSYPLCFIFSSPVGCKPEQQMMYAGSKNRLVQTAELTKVFEIRATDDLTEAWLQEKLAFFG", "length": 142 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0A8C2M625-1", "protein_name": "U3 small nucleolar RNA-associated protein 15 homolog", "gene_name": "LOC100755487", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MAGYKPVAIQTYPVLGEKITQDTLYWNNYKTPVQIKEFGAVSKVDFSPQPPYNYAVTASSRIHIYGRYSQEPIKTFSRFKDTAYCATFRQDGQLLVAGSEDGVVQLFDISGRAPLRQFEGHTKAVHTVDFTADKYHVVSGADDYTVKLWDIPNSKEIQTFREHSDYVRCGCASKLNPDLFVTGSYDHTVKMFDARTNKNVLCVEHGQPVESVLLFPSGGLLVSSGGRYVKVWDMLKGGQLLVSLKNHHKTVTCLCLSSSGQRLLSGSLDRKVKVYSTTSYKVVHSFDYAASILSLALSHEDETIVVGMTNGILSVKHRKSEAKKESLSRRRRPAYRTFVKGKIYMKQRDDIMINRPAKKHLEWYDKDLKSFRISKALDRVLEPNCVIKTPEVTVSIIKELNRRGVLANALAGRDEKEITRVLNFLIRNLSQPRFAPVLINAAEIVIDIYLPVIGQSPVVDKKFIVLQGLVEKEIDYQRELLETLGMMDMLFATMSRNDSVSLSENVPAELPEKTESPCQPGDTDKNS", "length": 527 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0A8C2MXE3-1", "protein_name": "Glycerol-3-phosphate acyltransferase 1, mitochondrial", "gene_name": "Gpam", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MDESSVTLGTIDVSYLPNSSEYSLGRCKHATEDWGDCGFKTTFFRSATLKWKESLMSRKRPFVGRCCYSCTPQSWERFFNPSIPSLGLRNVIYINETHTRHRGWLARRLSYILFVQERDVHKGMFATSVTENVLNSSRVQEAIAEVAAEMNPDGSAQQQSKAIQKVKKKARKILQEMVATVSPGMIRLTGWVLLKLFNSFFWNIQIHKGQLEMVKAATETNLPLLFLPVHRSHIDYLLLTFILFCHNIKAPYIASGNNLNIPIFSTLIHKLGGFFIRRRLDETPDGRKDVLYRALLHGHVVELLRQQQFLEIFLEGTRSRSGKTSCARAGLLSVVVDTLSSNTIPDILVIPVGISYDRIIEGHYNGEQLGKPKKNESLWSVARGVIRMLRKNYGYVRVDFAQPFSLKEYLESQSQKPTSAPLSLEQALLPAILPARPNDAAESEDTSSNEPRNTADEAFRRRLIANLGEHILFTASKSCAIMSTHIVACLLLYRHRQGIHLSTLVEDFFVMKEEVLARDFDLGFSGNSEDVVMHAIQLLGNCVTITHTSRKDEFFITPSTTVPSVFELNFYSNGVLHVFIMEAIIACSLYAVLNKRGSGASAGGPGSFISQEQLVRKAASLCYLLSNEGTISLPCQTFHQVCHETVGKFIQYGVLTVAEQDDQEDVSPGLAEQHWDKKLPEPLNWRSDEEDEDSDFGEEQRDCYLKVSQSKEHQQFITFLQRLLGPLLEAYSSAAIFVHNFSGPVPETEYLQKLHRYLITRTERNVAVYAESATYCLVKNAVKMFKDIGVFKETKRKRVSVLELSGTFLPQCNRQKLLEYILSFVVL", "length": 827 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0A8D1BQI2-1", "protein_name": "Uncharacterized protein", "gene_name": "LCE5A", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MSCQQNQQQCQPPPKSLPKYSTPKFPGPCPPLVSSCCGSRSGHGRCYSSGGGGCCLSHHRRRRYHPCQPQSSNCCDSGGGQQSGGSGCSHSSGGSGCCSGGCC", "length": 103 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8D1VKI8-1", "protein_name": "Uncharacterized protein", "gene_name": "NCR3", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MARMLLLILIRVHSGSCALWVSQPPEICTQEGTPAFLPVPSTPARGDWPLALSHGTGTNWPQGRRVVVLGQGVRTGNGTPLVVERGPAQLATPTIFLLRAGFYAFGFLSVAIGSTIYYQGKCHRHMGTHCRSADGL", "length": 136 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8I5XVN6-1", "protein_name": "SPATA31 domain-containing protein", "gene_name": "LOC689526", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MESFLLLMNSAIESWMNTSTMDIATDLSIAILCGVGLFFLLIPFLKDCPLSPASGNKTDIPKDVKRGRSNTRRKTDVEKGCRDGGKTVEETKTPSQPMKILTRQLLQDSTPQIFWNSSQKLDHLLLSQLFSSLTSLEDLILQKFNRRFWGTSSIFSESVVAMAHVLRNPSFPQQKSVRFSDPCVTDQAPSQAQGLRQQHRYHPRLHRQRKTSLVGMTWVPEKKILPISTPKQIHPCLKRRAYGVSCPTTEKGIQTSLPPECLSHKHGLYSKAVKGYVKRNHQKAIGKPPGNWLRDTLKTKAIRPASILSEHLRMFLHHKEPQTKDKATNVEKQQGTCIRSPPSKKLKQFQGRFPPNTDHYCKRRPQLSQPGQPSILNSKSYKLRKIIQSVLAGMTLMKDRADFSMQSQFSQAPQSSVCNAKRYKYSKRMGSVPRRVPLKKDTARYDMGKPIKKCLGAGTKNVPHSACSILGKRLRARNLALKKGQASVMNPTGNYCLHDSKAEMKLASNNTALPVQCRRTPYLQILEALNPIPPGVLASKLPRIVFPSSPICDFKEEYYSKAATVLKNLHHQDPGGTRVKSTSAASLESALSMCSAAKIQKTQRAPPPAASRGLSKAHTDLLKRHLSIQHSALYFEQGRIIQGTGKGSLQQNTNPQKAKHAPLKSFHEGDSRHHSWNGTMVGPGKRVPPAAAKQTKAVEVKKETPYAWSLGSNESHTGKDINISPRVFGSLGAKRSPGHLQTCTPQHSQDSTLRTQGHRNIILCSNKQPQPRPGRHDPECPSTVHPAKVNLSSEHSMSSFQNTCQKPKTAQGSCERADTKENRVLKDKIRINHLKDLCPHKERQGSIRPTAISQGGRLGRSRPCSLSSTQLKDTAKTRTSDKRQATSKSSWKSDIREVLKYGYVGSKDIIGQEDTSKKDQPPAVTERTEEDWTGEKAMCNMIAHLQYLTNFLFEIMEDTEWDPSKLQGCEVESLTFQLGSSSDSSEGDDDINQGTSTSTMSFGQTSPEMHNCSFTKTGIGDKTQSEIKAKTACDQHLNQVNRGMFSDQLPMPKEYDLSCRYRGIQHQQELGLPDQTFYQYKLRMTHCPHGGTKGHNYSFGYRKLGDQQQPDFTHKALDPHQSAKEDMGCVSCLSPKGSRPVKHRRTDCFSP", "length": 1151 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5XWP3-1", "protein_name": "Ig-like domain-containing protein", "gene_name": "ENSRNOG00000063695", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MQRDMCHMTPYRLLCVLVALALSGCNVAQEVTQVQSTASRQEGEEVTLDCSYETSYVAYYLSWYKQHLSGDIIFLIHQISSSTAEERSGRYSLVFQKSLKSISLVISASQPEDSGKYFCALSDLTQC", "length": 127 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5Y4M0-1", "protein_name": "Large ribosomal subunit protein uL14", "gene_name": "LOC108350588", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSEQRRGGSSGAKFRISLGLQVGAVINRADSTGTKNVYIISVKEIKGRLDRLPAAGVGHMVMATVQKSRPQLRKKVHPAMVIRQQKSCGRKDGVSLYFEEDAEVIVNNKGKMKGSAITGPIAKEHADSWPRIASNAGSTA", "length": 140 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5Y5C9-1", "protein_name": "Ribosomal protein L32 like 2", "gene_name": "Rpl32l2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAALRPLMKPKIIQKRTKKFIRHQSDRYVKIKRNWRKPRGINNRVRRRFKGQILVPNIGYGNNKKTKHMLPSCFRKFLVHNVKELEVLLMCSKSYCAEIAHNVSSKNRKAILERAAQLAIRVTNPNDRLCSKENE", "length": 135 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5Y6V7-1", "protein_name": "UPAR/Ly6 domain-containing protein", "gene_name": "Pate4", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MRNTEPLFDIVINCPIAPQFILKILLFPYPANTNLICNTCNRSENSECKNGTGQCTAPEGGSCSTISIYHGQRHVLSKQMCLGHCEEKPHYNGDFMIYVMCCSKNLCNSF", "length": 110 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5Y7P1-1", "protein_name": "Heterogeneous nuclear ribonucleoproteins A2/B1", "gene_name": "ENSRNOG00000069815", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MEREKEQFCKLFLGGLSFETTGESLRNYYERWGKLTDCVVMRDPASKRSRGFGFVTFSSMARPHSIDGRVVEPKRAVAREESGDPGAHVTVKKLFVVGIKEDTEVHHFRDYFEEYGKIDTTEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRKALSGQEMQKAQSSRSGRGGNFGFGNSRDGGGNFGPGQGSNFRRGSGGWESSDGYGSGRGFGDGYNGYGGGTGGGNFGGSPGYGEGRGGYGGGGPGYGNQDGSYRGGYDNYGGGNYGKGNYNDFGNHNQQPSNCGPMKSGNFGGSRNMGGPRDEHRSFPSWKGYNGVFGKQSPLTWIKTHSL", "length": 347 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5ZKP8-1", "protein_name": "Glycerol-3-phosphate dehydrogenase [NAD(+)]", "gene_name": "Gpd1l2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGATTLRVCIVGFWSWGSAIAKIIGTNVKNQQKFASTVKMWVSEEAVNGRKLTDIINHYHENVKYLPGHKLPENVVAVANLSEAVQDADLLVFTTPHQFIHKICNEITGRVPKKALGIIHMESIDEGPRGLMLISDIIREKIGMDVSVLMGANTAREVAAGEFCETTIGSKVIQNGILFKELLQTSNFCITVVDDADAVELCGALKHIVAMGTNFCNGLHCGNNSKAAVLRLGLVEMITFTRIFCKSQVSTTTFLESCGFANPITICYRGSDCKEAKTFPRIGKTMGNLQKEVLNGQTLQGLKTSALVYQFLKQKGLLAKFPLFVTVYRICYEGRPSTEILTCLQNHPAHM", "length": 351 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5ZL63-1", "protein_name": "Ankyrin repeat domain 13a", "gene_name": "Ankrd13a", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MVSDQSRKAAAEGGSSPMVWSRPARAPPGGRADGRGPIVERTTGEGRAGDESRRARTVGFVRGDLGLPKGPAVPQNGGGRVSRRGGLVGRHGAGLGPFRKSGPPPRSVMERLAYFPVRGGSAGSSRFASCQRGRERAGRGVGAAERVPEPVPSPARDPGPPAPPAPDSEALVVRCARHLAARRSPPLALRPVGRAPETPSGGSRLVAGGRSGLGGDLLAMSSARDTSSRFPLHLLVWNNDYRQLEKELRDQNAEALDPRGRTLLHLAVSLGHLESARVLLRHKADVTKENGQGWTVLHEAVSTGDPEMVYTVLQHRDYHNTSMALEGVPELLHKILEAPDFYVQMKWEFTSWVPLVSRICPNDVCRIWKSGAKLRVDITLLGFENMSWIRGRRSLIFKGGDNWAELMEVNHDDRVVTTEHFDLSQEMERLTLDLMKPKSREVERRLTSPVINTSLDTKNVAFERTKSGFWGWRTDKAEVVNGYEAKVYSVNNVSVITKIRTEHLTEEEKKRYKEDRNPLESLLGTVEHQFGAQGQDLTTECATVNNPTAITPDEYFDEDFDLKDRDIGRPKELTIRTQKFKATLWMCEEFPLSLVEQVIPIIDLMARTSAHFARLRDFIKLDFPPGFPVKIEIPLFHVLNARITFGNVNGCSTAEERQSVEGTQAECAASDATNFEVDQSVFEIPESYHVQDNGRNVHLQDEDYEIMQFAIQQSLLESSRSQDLSGPASNGGVSHAHSYEAQYERAIQESLLTNMEGRCPGGLSDSSRFDSDLRLAMELSAKELAEQELRLQEEEAELQQVLQLSLTEK", "length": 809 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5ZP24-1", "protein_name": "Large ribosomal subunit protein uL30", "gene_name": "ENSRNOG00000064315", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MEAVPEKEKKVAAVPGTLKKKKVPAVPETLKKKRRNFSELKVRRLRKKFALKTLRKARRKLICEKAKHYHKECRQMYLTEIRMARMARKAGNVYVSAEPTLAFVIRIRGISGVSPKVREVLQLLRLRQILNGTFVKLSKASVKMLRIVEPYIAWGYPNLKSVNELIYKRGYGKIRKKRIALTDNSLMARSLGKFGIICMEDLIHEIYTVGKHFKEANNFLWPLKLSSPRGGMKKKTTHFVEGGDAGNRETR", "length": 251 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5ZPV0-1", "protein_name": "ATP synthase peripheral stalk subunit F6, mitochondrial", "gene_name": "ENSRNOG00000066253", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MIVQRIFRLSSVLPSAVSVHLRSNPGVTAVAFNKEPDPVQKLFVDKIREYKTKRQVSGGPVDTGPEYHQDLDREPFKLKQLYGKGEMDKFPTFKFEDPKFVVIDKPQS", "length": 108 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5ZRI3-1", "protein_name": "Natural killer cell cytotoxicity receptor 3 ligand 1", "gene_name": "Ncr3lg1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MASQSCQRGPENAHMHPKGPCCSALCFLCSLGSSPHGSSLGPLRKCGRRSKPVQSSPEGSRVAEWPDGLLSLLLLLWSLLPSAGGLELEMAGTTQIVFLHEDVTIPCKILGSLHLDLSIVGVIWSLKKDGDESEVFKFYGDQLEAVRPGANVSLLGLEHGDASLYLPRFELWEAGEYQCKVVVTPEKKEGTTRLEVVAHPNMSLSEKPATARGGKEKLIICQLDGFYPEALDIKWMGSALKDSHFQEITEGVVTGPTVKNDDGTFSVTSSLALKPALEDHMYQCVVWHRSWLMPQSLNVTVFENTRDSTHGTVPPTAEVGPPVSEPRSVMIYVTIIGLCILLFSVIVCGLWKWKRLTTSNTGLCLRLDVRC", "length": 371 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5ZS91-1", "protein_name": "non-specific serine/threonine protein kinase", "gene_name": "LOC134482834", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MPTETEEELPTPTPKPSISEEGNFHSQYQVLGTSGQGGNGKVLLAHNRLTGTPVAVKVLRKDKQWFQPAMMEANIMRKINHPNIVSLIQVIEKETRIYLIMELVEGQELYQYIRESGHIEEDEARQIFEQILSAVSYCHGKGIVHRDLKLDNIMIDKNKKVKVIDFGLSTQFPPGKMLNHHCGTHSFGSSELLLGHRYDRPKNDMWIIGVVLYCMVVGKLTFDSVIIQDLQRQVVAGVYPAPCGVSKELEDLLSKLLRVNPNFRPTARKAMKHPWFKEHWNGLIVPYEELLPLTPDPAILDAMKSIGLQASVVKHTLKQRKYNEEMATYFFLQKQALQGDGCTAQAQQVSPVAAPFPSLDPAAAFRLEPKRSGSLPVLGTLRVSSSHGHVSHYGQNAHPKGGKRYTVAGRLRPLPMTPTQDHYHKCAVSVPCIQTTSIFSEKSSNKKIKEDNPLSHRAPLEDKPIPSRVRHRGFKGWTRNIANALIKLCCCMPRRKKPRLGQNRISPQK", "length": 509 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5ZT61-1", "protein_name": "non-specific serine/threonine protein kinase", "gene_name": "LOC134479845", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MDITSIKKTLGSQYRVAFFLGQGSYGSVKLAWHRRTQALVAIKTVEISKNTIRAILSEMTTLELLHHPNIISLFQILVTANQIHFILQYAPGGNLVQLISEEGPLPEEKAKKMFGQIVSAIRHCHSLDIVHRDIKPQNILIDGEGNVKLIDFGLAVKCRPGTLLSRHCGTRGFNAPELVLRQPYDGKSSDVWSLGVLLYFITTGYFPFRGNTIDEIEQKITTGTYTVPHHLSGQLENLIHQIFTVSPEMRPSIEEIENHPWIKKCELKIPPMSDPDYKIIEMLCGMGYNAKDILESLQKKRYDEPMGAYLSLKNHVSEGYDLASITPTKPGDPCPPPPPSPAHPSVFGLPLRRRASEPNFGLLHRQPSREQNPLDLILSGLNMGRCVSMPPIAVYYPKKQRSTSTRALHSRPVASPCVYNNMLGVEIILPHKQDIEMNTSSPPQTMGWFKRLRKGIGDCFSRLCCFPRAPKKKTQHRSSKRVAPLKKAASSTI", "length": 493 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5ZXB5-1", "protein_name": "Uncharacterized protein", "gene_name": "Pilrb2l2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "TALLSSLPGRNLAMARLLLLLLSAACLHTGNSAGYQEKNDFGVDQPDVLSGVQGGSIEIPFSFYFPWKLAKDPQMSIAWRWKHYHGEFIYTSTRPFIHEHFKGRLIMNWTPGQTSGVLRILNLKENDQATYFSSVFLQTPEGMKLWQSIPGTKLIIHALDTTMRSPSIIPSVVPTDDLEYTQGQRNPSLLNLGAMVGMVMAKVVVIIPLYGWMIFLWWKQR", "length": 221 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5ZY57-1", "protein_name": "40S ribosomal protein S26", "gene_name": "LOC134478821", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSPGPRRPRQEAGSKPRELQQRVLASVKRRCLFSSLGSNTTKKKRNNGRAKKGHGHVQPIRCTNCARCVPKDKAIKMFVIRNILEAAAVRGISEANVFDAYVPPKLYLKLHYCVSCAIHSKVVGNRSCEARKDQTPPPRFRPSGAAPQPPPKPM", "length": 154 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5ZYE5-1", "protein_name": "Oligosaccharyltransferase complex subunit", "gene_name": "Ostcl1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "METKHSALLRTFPFLVLECPNLKLKKPPWVHMLLAMTMYALVVVSYFFITGGIIYDVSIEPPSVDSMTDEHGHQRPVAFLARRVNGQYIMEGLASSFLFTMGGLGFIILDRSNTPNIPKLSGFLLLFDFVCVLLSFFIARVFMRMKLPDCLMG", "length": 153 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5ZYN2-1", "protein_name": "Non-selective voltage-gated ion channel VDAC2", "gene_name": "AABR07051831.1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAECCVLVCPRPMCIPPPYADLGKAARDIFNKGFGLGLVKLDVKTMSCSGGEFSISGSSNTDTGKVSGTLETKYKWCGYALTFTEKWNTNNTLGTEIAIENQICQGLKLTFDTMFSPNTGKKSGKIKSAYKRECINLGYDVDFDFDFGWLAGYQMTFDSAKSKLTRNNFAVCYRTGDFQLHTNVNNGTEFGGSIYQKVLCEDFDTSVNLAWTSGTNCTRFDIIAKYQLDPTASISAKVNNSSLIGVGYAQTLRPGVKLTPSALVYGKSFNAGGHKLGLDLELEV", "length": 284 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5ZYX3-1", "protein_name": "Methyl-CpG binding domain protein 3 like 3", "gene_name": "Mbd3l3", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "LGELGNAGRLTGSMIPSRLQKRRKIQVAKSKRKAKHKSGTTLRNPLRLTSCIFPQPVTVITSYPENKTRYRRDEAKLKKPQQLCALERLKNFQFGGDSKENLSCPLELANAVERIARGMQDEASNQSGDKDQLTSGQVTSDQPPYLETNEHVALQLSPSFSSQGVTLPVPLHLSPSYFLRKVTTGDIQRQAWKVKKARKRLAEALEADRLARQTENMRE", "length": 219 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5ZZU9-1", "protein_name": "Keratin-associated protein", "gene_name": "ENSRNOG00000070302", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "SPSTCELSSSLHSDCQETCIEPSICQRSCVASSPCQMPCYYPRSSTACSPCQGTYDGSMGVGSNSLKSFGGFTGSLGYGNSGFGSFGFGSCGIRSQGFGCNFHRPGYFSSKSVQSSYYQPGYTSGFC", "length": 127 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5ZZY5-1", "protein_name": "Ribosomal protein eL8/eL30/eS12/Gadd45 domain-containing protein", "gene_name": "ENSRNOG00000064452", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MTKIKAVTEESEAQGEGCSQQHRYQELLVYLNPIAQHPGFPPPDLRKIEKGKKKKKRRPTKQKQIRHGVKEVQKFVNKGKKGIMVLTGDTLRGTAIFQLCARTRICPTSIFPLTDLGAAMGSKHPTCVIMVKLHEEYHEAYDKCLEEVQTLATPL", "length": 155 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6A2Z7-1", "protein_name": "Developmental pluripotency associated 1, pseudogene 1", "gene_name": "Dppa1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MMPPQVLISGLLLLLPAAWTTTVTSSDQLWNNHTEVVPTQSPLKISTKDLYIGTSVSAALLILLAGVLAVLKYRHRRKKILESAVVFHGFQNGVFQSTEQSQAVDVYVIEDSKVPVAH", "length": 118 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6A3D9-1", "protein_name": "Small nuclear ribonucleoprotein Sm D3", "gene_name": "Snrpd3l1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSIGRPIEVLQEAQGYMVTRETITGEVYPGKLIEAEDNMNCQMSNITVTYRDGPVAQPEQVYICDTKIRFPILPNMLKNAPVLENLKNKNQGSRAGQGKAAILKAQVAARGRGHEMGPWKLPEAKTVFSIKENFPSCLLLGF", "length": 142 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6A3N0-1", "protein_name": "Uncharacterized protein", "gene_name": "Pramef20-ps2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MTVQTPPTLEKLAIQSLIRNEDVAMSSLGELPAVLFPALFKEAFTGKHINLVKEVVAAWPFPCLLVGALMKTPNLETLQAVLDGVDMQLTRKFHTRRTKLQVLDLRNMHHYFWNIQAGEEDSSCSAENSKEKKVVKVFHRYALRKRVKVIVELYIHSCLKEEQTCLLKWAQQRKGSLHFCCTKMKVWNLSLCGIGEILKVFDPQHITELELHTEWTLLELAHFAPYFGQMRNLQKAFLAPLHRIMFSNSNGKRDREAKCIKKFISQFSKFNCLQHLHMFCVHFLRDHMNQVLGCLMTPLTLSITYYLISQKDLDSLSRSQSLFQLKHLDLRGVVLCDLDIMPLRGLLEKVADTLETLDLQWCKMTDSQLYALLPALRHCCQLTMVNFYSNNFSVPILKDLMQHIANWSRIRVQQYPAPLECYDDLAQVSVKRFAKLSSELMYTLGVIRQTKNISFATDICHTCGQRCVYHNGSRLCCCWH", "length": 480 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6A3R7-1", "protein_name": "Ubiquinol-cytochrome-c reductase complex assembly factor 3", "gene_name": "LOC120093241", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MEAARKALTVVAVLGSGAGVGSILFALVTPGELQKQLMLQEMPERDSRRRDAAVRTKELVMATLKDAAATKENVAWRRNWTVRGDGRSA", "length": 89 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6A3T5-1", "protein_name": "Large ribosomal subunit protein mL62", "gene_name": "Mrpl58", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "EHGGRLGPTLEPEPSWNLVAPAARALCSPDSAQTGERHRVQEHLQPGQAVPRIQGRGYRLEGPGEPRKAGRKGRFLLLLDRLSISYCRSSGPGGQNVNKVNSKAEVRFHLASADWIAEPVRQKIALTHKNKINKAGELVLTSESSRYQFRNLAECLQKIRDMIAKASQVPKEPSKEDAQLQRLRIEKMNRERLRQKRINSTIKTSRRMTMD", "length": 211 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6A478-1", "protein_name": "T-cell activation Rho GTPase-activating protein", "gene_name": "LOC134485907", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGEIHRTLLCQGPVELTSGRKRNKRYLSLFDDVLVVSTNLTKKKFKIKCIIPLNYLWVVDDVELVRANQTCTCKTIFFYWATGNALATFRSKEQKVQWYTFLTRSINEAKKGIKKTFPLHIFPEDIQTCDSSLCVTATNMDTVNDIMEKLLPMIRVHNIEDYQLWFSPGHKETPRALQGHEYPYDIIMNNVQNNLSKSNSKIFTAFPPLPGLFMENQSWDTGGQFILKPRDSAGSQQQDAKERPRKSCMTSCFHGGSVPHHDQECSDPRDDKRGKLFGQDLSSICQDGKLPTIILDMLSRIKDKGPTTDDIFLITPNGSLCKTIKEKLDNGENVDIYQQPVHVVAWILKEFLQSIKGSLLTSKLYDQWLIVPEKVNDKEKLAAVKSLLEKLPKPNADLLRQLFRILHQIKTNSSVNNMSSFRLSLETAPCILWLPSYRNNILTNDIAKKISLVTFMIDNSPELFGEDIVAVWYETSLYHPPGLKYPCSQNTPSSNGIMEETEHGLSSCPGERTCTPDFDELPRSGAAASIPYEGILASEKGEGNESTTQPEPVQNSPTPQTKKELGNCSPNILKDVNVPAVILDMLSVIAEKGQCSDDIFRMQSEKSHWSLKEKVNTGKHVNLKEESVLTVASVVKDFIKNIEGSLLSCDLYENWLSIPDEGPLLGKIASIQNILLKMPKPNYVLLKQLICVLQKIKAASTNQLDTFDLSVRIAPHVLWNPTCKTLFGRDLSKKLSIIKFMIDNCQELFGENDNIFCEDNQKSYDINLSSDTLNTSGKATLMIETIDDHDVKTSKSNTKKLEMSSAVPHEGGPTAGHNGTTSKYNVPQEKILHD", "length": 834 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6A4C1-1", "protein_name": "RRM domain-containing protein", "gene_name": "ENSRNOG00000063783", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "LTCCAINSDPHPDSGLKMEGHDPKEPEQLRKLFIGGLSFEATDDSLREHFEKWGTLTDCVVMRDPQTKRSRSFSFVTYSCVKEVDAAMCAQPHNVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIKTMEVMEDRLIDKIVVQKYHTINGHNCEVKKALSKQEMQSAGSQRGRGGGSGNFMGRGGNFGRGGNFDGRGGYGGGGGGSRGSYVGGDGGYNGFGGDSGNYGGGPGYSSRGGYGGGGPGYGNQGGGYGGGGGGYDSYNEGGNFGGGNYGGGGNYNDFGNYSGQQQSNYGRMKRGRFGGRSSGSPYGGGYGSGGGSGGYGSRKF", "length": 350 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6A5E5-1", "protein_name": "Paired immunoglobulin-like type 2 receptor alpha", "gene_name": "Pilrb1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAQILLLLLSATCLHTGNSGGYTRKNYFGVNQPAVLSGVQGGSIEIPFSFYFPWKLAKDPQMSIAWRWKEVHGEFIYQSTLSFIHEHFKDRLILNWTQGQTFGVLRILNLKENDQATYFSQVCLQTTEGMKCWQSIPGTKLIVTHGVICSLLISPQLSYDHEDPLHHHLCRPHSWPGEHKGPKESFTAEPGGHHWDGRGQSCSHHPPLRMDDLSVVEAKASRVTPKPQPE", "length": 230 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6A5T5-1", "protein_name": "Large ribosomal subunit protein eL21", "gene_name": "Rpl21l1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MTNTKGKRRGTRYMFSRPFRNHGVIPLATYIRIYKKGDIVDIKGMGTAQKGMPHKCYHGKTGRAYNVTQHAVGIIVNKQVKGKIPAKRINVRIEHTKHSKSRDGFLKRVKENDQKKKEAKEKGTWVQLKRQPVPPREAHFVRTNGKEPELLERSPYEFMA", "length": 160 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6A8T3-1", "protein_name": "Olfactory receptor", "gene_name": "Or1o11b", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "RMNCSQAPGFILLGLSRDPEKWQLFFSVFLVLYLLGLSGNLLLLLAIGADVHLHTPMYFFLSQLSLVDLCFITTTAPKILQTLWTGDGSISFSGCLTQLYFFAVFADMDNLLLAVMAIDRYAAICHPLLYPLLMTPCRCGVLVSGSWGVAHCVSLTHTLLLSQLYFHTNQMIPHFFCDFGPLLLLSCSDAHLNEGLMMALAGVFGISALLCIVSSYSCIFYAVARVPSAQGKRKALATCSSHLSVVLLFYSTVFTTYLKPPSSSYSSGEVVAAVMYTLVTPTLNPFIYSLRNKDVKSSLRRILNMVKSPD", "length": 310 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6A969-1", "protein_name": "Uncharacterized protein", "gene_name": "ENSRNOG00000067430", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MFFLFWTFPGLELDKLALLSFESSSSIHPRACASTPAFQRSHNPGDAAQQEAKQREAEMRNSILTRVLDQSAWVRLSDLALVKPDKTKAVEHRVQMARYGQLSGTVSEQGFIETPEKVSQQTEEKATVKFNRREVTDSDEDDDY", "length": 144 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6A9H4-1", "protein_name": "NAD(P)(+)--arginine ADP-ribosyltransferase", "gene_name": "Art3", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGQATARGVIKRKAFPGRQLSLSTTSCPGGKITPAESGNRFESGHHLNVLQRHKRQKRKMKMGHFELVTTLLAAMVLMDVFQVQAEVLDMAENVFDDEYLKCNSRMEMKYIPRMHGEELANDELLQSVWDKAGIQWEAQKAQLSLPKNFKDAYGIALTAYVTEAQDQSPFYHTFNRAVKIAGLSRRRYIYNFPFKAFHFYLVRALQLLRRPCEESYKNVVYSTSPNISFAFGEQNQARLGNFTLAYSAKPQTANEQRLLTIQTCFGVAVGKLLNKESEGIVLIPLSEVFQVSRKGTDDDLILHSINSTCSYYECSFLGGLKAGSCTTNPENPDPGYLNNPDLDSQKLEDSGRKSLDSVKMPEIKVLQGEENPLLPDEKPEDRNRGKANVPTPGLVPVPGPKSHPSSSSGHRLLPSDTASTILLIAAAVDFIAL", "length": 433 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6AA84-1", "protein_name": "Ankyrin repeat domain 10", "gene_name": "Ankrd10", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSAGAGAGVEAGFSSEELLSLRFPLHRACRDGDLVALCSLLPHTPRAHLAAEDSFYGWTPVHWAAHFGKVGAGTLRRHFPRGVLLGSERTPPCLESAATARSAPPAPPEGSRAHVQQSGLGVKGWGRGGAEAALAPPGVQGACAAARSPGPRGARGVMGGGAEMGSVWPAPRRTQGACAHLWLFRAGRADRMQLRRFARRPSGFGEWCGRLLLEARREPGASRSCLMETGRRAPLRHKGMDAALAAGGVRSAPAVVDGGLAARPTGPLSQLGPPCLECLIQLVRAGASLNVSTTRYAQTPAHIAAFGGHPQCLVWLIQAGANINKPDCEGETPIHKAARSGSLECISALVGNGAQTDLRNASGLTAADIAQTQGFQECTQFLLSLQNHQMSRFCPNGTLSGGHENILPNHINLGTNRKRCLEDSESLGVKKARTRVPSLDHTMPLANGDAEDDADRMHVDREFAAVSDMKNSSSVLNTLTNGSVINGHLDFPCVAQLNGMESRSDPCLTGSNGISNGQPFPSGQGPVCANGTEEPEKTMGVNPEMCGSLHLNGSPSSCVASRPSWVGDIGESLHYGHYHGFGDTAESIPELSSVLEHSSCVRVEQRYDSAVLGAMQLHHGS", "length": 621 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6ABF4-1", "protein_name": "Nuclear transport factor 2", "gene_name": "AABR07018058.1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGDKPIWEQIGSSFIQNYYPLFDNDRTQLGAIYIGASCLTWEGQQFQGKAAIVEKLSSLPFQKIQHSIMAQQYQPTPDSCIISMVVGQLKADEDPIMGFHQMFLLKNINDAWVCTNDMFRLALHNSS", "length": 127 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6AC04-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vom1r38", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSMLSQNKTLKSIEEVALHVILLCQVGVGTVANFLLFIHNFSVILTNCQLTPIQVIVTNLAVASAFNLLLLAFPNNVTLFVPRKAPSDLSCKLWYFICLVARSTNLSSTCVLSTYQFVMLLPGNWSRVILKGRAPKIVNYSCYGCWIFSVLNNAYIPVKVSGPQKTQNDTDFKDKWVCSTSGFSVGMSFLRFAHDALFISIMIWTNVSMVILLNRHHHRLQHIHSSNQDHRAYADTRAAHTILMLVVTFLSFYLLDCICTFFHISFVDSRLLLRRIKEVLTASFPTISPFLLIFRGPKNPCSLLSRS", "length": 307 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6AC51-1", "protein_name": "Non-histone chromosomal protein HMG-17", "gene_name": "Hmgn2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MPKRKAEGDAKGDKAKVKDEPQRRSARLSAKPAPPKPEPKPKKAPAKKGEKVPKGKKGKADAGKDANNPAENGDAKTDQAQKADGAGDAK", "length": 90 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6AC66-1", "protein_name": "Eukaryotic translation initiation factor 6", "gene_name": "Eif6-ps1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MVVRASFENNCEVSCFARLTNTYSLVAIGGSENFYSVFEGELSDTIPVVHASIASCRIIGRGTSVWGTGMGYWYPTTTTDQELQHIHDSLLDSVQIRRVEEGLSALDNVTTCNDYVALVHPDLDRETEEILAGVLKVEVLTVADQVLVGSYCVFSNQGGLVYPKTSIEDQDELSSPLQVPLVAGTVNRGSEVIAAGMVVNDWCAFCGLDTTSTELSVVESVFKLNEAKPSTIATSMRDSLIDRLT", "length": 245 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6ACC5-1", "protein_name": "Uncharacterized protein", "gene_name": "ENSRNOG00000069094", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "LPLLAFEKYVVCDGELQRLQVSCEVLGDVDPPQRLSASVVQMKQSVVEFLGTLVEQDAQGAAEDMDNALVGDNEEAEGENNSTRTNSDGPFTERPNQRLNNR", "length": 102 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6AEL7-1", "protein_name": "Protein phosphatase 4 regulatory subunit 3C like 1", "gene_name": "Ppp4r3cl1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MEDKLYRVKVYVMMEDKQWKDIGAGQISSKYIDRLQGVCLLVHSESDGSPILECKIQPNVPYQKHQGKVIIWSEAKNHGTAIHFQEPNDCQETWEVICQVQGKDPNVEITQLLTDDLESFKDMLLSWNKVEMSSCELHTLENIADLLSFVNEAPSHKKILTLVLEKEGYIKKLLQLFKTCEKHQNIDGLHYLNNIIRGILFLDNIHLFNIMFSDEFIMDVVGCLEYGPGLDEPKQHRQFLTQNVKFKNVMQITHSQLRKKIQQTYRMQYIYDIVLPTPSIFEVNLLHDLSTMIFFNKIEIITMLQEDEHFLLEVLAQLKDNTVSNERRHELLLFFKEFCAFAKTLHFQKKNTLLKTLIKLGIISALKVVVHMHDYQIQVAALELFAHLVEYSPRLIRAYAMKEAQYSEDNDGLLINIMIKQMTCDSDPEFSRSIILTTVLHAILDPENMRVTTKGHERRKFLNYFYRHCMNKLIEPILSITVENNSDDNRVNICPDNYQNAQLLGAILEILTFCVQYHSKYVKNYIISKNLLSRILILMSSKHTFLILCAVRFMRKMIGLKDKMYNLYIVEKNLFEPVVNAFMHNGHRYNMLNSAIIELFEFIRQENIKSLIANIVEKFFMFFESIQYVQTFKGLKTKYEEEKKKKRERQLRKSLHNIIYQRIYCRHIKAMEVKVKADIFCRQITDKEEEREKGGGGGEGGGGRGGEGEGGREGGGREGEGGGGGKGGRGEGGAVLSMGSDIPSHYDMFVKINEMNERENVIECRKRKSSATSEYSTSCGDTSDNGISTVYCSSLVPLVDYAYDTDGEDDDGSYGNNENEEEEEEEEEEEPPKKKPYFHP", "length": 840 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6AFG0-1", "protein_name": "Cytochrome b5", "gene_name": "ENSRNOG00000064959", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MFAKEKGKFEDMAKDVKCYTLGEIQKHQDIKNSWAMLHHRVYDLTKFLEEHLGEEEVLRERAGGHASENFEDVGCSTNVQGLSKVHIIGLFHPALITTIKLNSNWWDQLCSPTSQVVVAHTFNPSTREVGAVGFP", "length": 135 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6AGM4-1", "protein_name": "Proline rich 18", "gene_name": "Prr18", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MLRLLGRVMSFSPMPPPPPPPPPPARTQGGPAARQLSRRPCGPPAASPPAPAAAAAGEKKRRPPEMLLSSSWPSATLKRPPARRGPGLGPGTPQPPTSARVPPQPSPGRGGTSATCSAPRRIACSHIPAGSTASGTSAGAGAGPEDATRFSLSLTPEAILVIQRRHLEKQLLARPRRPFPAPSADPRRPLVPCPRTRSSTLRRGGPTSVPDAPLAVAVSSRPPRASLLPGGLQATMPSPRPSSLRPVLKVSLLNEKHKYDDEEYEEEVEVVDEGLVRKCTEWLRGVESAAAARGRTGHLDSLPHLSTL", "length": 308 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6AGS9-1", "protein_name": "Olfactory receptor", "gene_name": "Or5aq7b", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MEVWNSTGVKEFILIGLTENPNWQVPLFLLFCIIYFIILVGNCGMIFLIWLNVQLHTPMYFFLSNLSFCDICYSTIIAPKMIINFLSEHKSTRLFACILQSFFFAVYATTEVVLLSMMAYDRYVAIANPLMYTVIMTQSICTQMILASYLTGLINSLIHTIGLLKLNFCGPNIVNHFFCDVPPLLKLACSDSHINEILLLVFSGIIAISTLIIVIVSYIHIIIAILRIRSAMGRGKAFSTCASHLTAVALFYGSLTFSYIQPSSQYSMEQEKVSAVFYTLVIPMLNPLIYSLRNKDVKEAAQKLMLGKRNAC", "length": 312 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6AIA3-1", "protein_name": "Uncharacterized protein", "gene_name": "ENSRNOG00000065493", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MIFVPFFPHPGSIRKDGVVYAHTMENSSNSPRETREPAPLRRTWRGCFQRALPRVSKFFRRGRGSTGGWDNGSPRQGPMHSDQDLRHLRSLLSKESCPVMSK", "length": 102 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6AK52-1", "protein_name": "Olfactory receptor", "gene_name": "Or9s14", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAIEVHRNGSLSAMSLQGFVLLGFRGGAETQALLFTVFLVLYVVTVLGNLTMIMVITLDARLHSPMYFFLKNLSFVDLCLSTVVVPNALASIFFSSKTISFAGCATQFFFFSLLAATEAVLLAVMAYDRFMAICSPLRYPVTMCPMTCVRLVLGTFCVACLNSIVQTSLTFRLPFCSSNRIDHFYCDVPPLLQLACASTALNELVMFGICGFIIVCAVFVVIISYVYITVTILRMHSGSGRHKLFSTCGSHMTAVSLFYGTGFAVYGQPGGVASMEQGKVVSIIYILIIPMLNPLIYSLRNKDVKDALRRLGQRHSLAKESG", "length": 322 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6AMC4-1", "protein_name": "Retinoic acid early-inducible protein 1 domain-containing protein", "gene_name": "ENSRNOG00000068014", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MCVFKNAWGHRNMCSMALCSQFGTHLHVSLTDAHSLSCNLIIRSPTKAEPLRYEGHCSMDEIVFLSFNNVNKTMPLGNQEKMANATKVQKCLTQWIDLLGQDLRDKVSEIKVHTTKTSGHPTLRVTMLSKHRHGEIIGASWEFNISENYSFILDLKTMKWKPQDIMKEWKDDETLMKHLNLSIVECSQKFNEFLNQHEERTSRYYLDSALPPAPPPLFKGFTILLWHSYTPAISPTSSDTHSSFINFRDGLIDINFPL", "length": 258 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6AMN7-1", "protein_name": "60S ribosomal protein L7a", "gene_name": "ENSRNOG00000070681", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MLKGKKAKGKKVAPAPAVVKKQEAKKVVNPLFEKRPKNFGIGQDIQPKRDLTRFVKWPGYITLQRQRAILYKRLKVPPAINQFTQALDRQTATQLLKLAHKYRPETKQEKKQRLLACAEKKAAGKGDVSTKRPPVLRAGVNTVTTLVENKKAQLVVIAHDVDPIELVVFLPALCRKMGVLYCIIKGKARLGRLVHRKTCTTVVFTQVNSEDKGALAKLVGAIRTNYNDRYNEIRRHWGGNVLGPKSVARIAKLEKAKAKELATKLG", "length": 266 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6AMX9-1", "protein_name": "Ribosomal biogenesis factor", "gene_name": "Rbis", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAKNKLKGQKSRNVFHIASHKPLKAKNKAKPVTTNLKKINIMNHEKVNRMNRAFVNIQKELANFSKSLSLKSVQKELHHEKEPANVDEATRLMAQL", "length": 96 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6ARJ3-1", "protein_name": "G-protein coupled receptors family 1 profile domain-containing protein", "gene_name": "Or8b101l1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MTLGNVSSVKEFILLGLTQQPELQLPLFFLFLGIYVVSVVGNLGLIVLIVLNPHLHTPMYYFLFNLSFTDLCYSTVITPRMLVGFVKQNIISHAECMTQLFSFCFFVIDECYILTAMAYDRYAAICKPLLYQVTMSHQICLLMTVGVYMMGFVGAMAHTGSMLSLTFCEGNIINHYMCDIPPLQKLSCTSTSINELVVFTVVGVNVIIPTLTLFVSYTLILSNILSIHSAEGRSKAFSTCGSYIIAVSIFFGAVLFMYFKPSSASVDGDKVSTIFYTILGPMLNPFIYSIRNKDVHVALRRTLKKRIFT", "length": 309 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6ATM0-1", "protein_name": "ELAV-like protein", "gene_name": "Elavl3", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MKDAGAGSCRYKGLGAAAVRPRARSAQRGPVGGREGGREERTHYPAPDRPDRGPAAEGRAAEISVGKSDFCGPRGAALRAPSTARPLPPSTCRQGSGRRSAHPQARVSSRPSRAPPPPSSPLRRPQSQTPGRDPGVSTRRPPRSARPPEPPSIRTAPAGHTRMVTQILGAMESQVGGGPAGPALPNGPLLGTNGATDDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDADKAINTLNGLKLQTKTIKVSYARPSSASIRDANLYVSGLPKTMSQKEMEQLFSQYGRIITSRILLDQATGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGAAEPITVKFANNPSQKTGQALLTHLYQSSARRYAGPLHHQTQRFRLDNLLNMAYGVKRFSPIAIDGMSGLAGVGLSGGAAGAGWCIFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGERVLQVSFKTSKQHKA", "length": 522 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6AUS4-1", "protein_name": "Ubiquinol-cytochrome-c reductase complex assembly factor 3", "gene_name": "ENSRNOG00000062467", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MQTAAGKTLAVVAVLGAGAGVGSILFALVTPGELQKQSMLQEMPERDSRRRNEAVRTKELVIATLKDAAATKGNVAWRRTGQLEGQGRMCGTKGTNKCSLPIKWISQLDI", "length": 110 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6AWY6-1", "protein_name": "Uncharacterized protein", "gene_name": "ENSRNOG00000065059", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAKATKKSKNTTSDVEPSTSSAKSKKAKTCYQYQTRAGEKKSRWSGSDCSVNVQKTTKKAKRTLPRIAENNTSEKTVPPTKKTKRAKDEQLFGHYHRLMDEISTSTERGPEQSSTDSSSASTSDEESQ", "length": 128 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6B5G4-1", "protein_name": "protein-tyrosine-phosphatase", "gene_name": "Ptp4a1l1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MARMNCPAPVEVTYKNMRFLITHNPTNATLNKFIEELKKYGVTTIVRVCKATHDTTLVEKESIHVLEWHFDDGAPPSNQIVDDWLSLVKIKFPEEPGCRIAVRCVAGLGRAPGLVALALIEGGMNYEDAVQFIRQKRRGAFNGQQRLPLEKYHPKMWLRFKDSNSHRNNCCIQ", "length": 173 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6B646-1", "protein_name": "Ankyrin repeat domain 66", "gene_name": "Ankrd66", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MRSREARLHHQTPGDQEAGAACLLSWGGGGASFHGVNTLTLRPAMMACSTELLKDTDSVMELSKLSDMTKLHQAVAAGDYNSVKKILKKGLCDPNYKDVDWNDRTPLHWAAIRGQMEVIHLLIQYGARPCLVTDVGWTAAHFAAESGHLNVLKTLHALHAAIDAADFFGDTPKRIAQIYGQKDCVDFLDTAEPECRDHRQRGLLFDERDPDWDLKKRELELSLPVPDQNTNKKKKRIRGSTRVNHSKAWRI", "length": 251 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6G1V0-1", "protein_name": "Ankyrin repeat domain 62 like", "gene_name": "Ankrd62l", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSRVAGLSSKKSRWLLQSLLDQQRHSLGTGFESANILLSPKYHLKDKDLRKIHKAARDGDAARVQQLLLGKHCVNDKDKKKRTALHIACAYGHPKVVMALVEGKCEVNATDSEECTSLVKAVQCQEEECATILLENNADPNIVDAQGNSALHYAVYYKNTSLAAKLLDHEVNIEATNKDGFTPFLLAVSENKLKIAKFLLMKNASIHAADNQKRTALMHAVSHDSTNLVRFVLEQGVDLFVKDAFGLTAIDYAADFKYNSNMEILLEYKAKRYEESERANLVEKSSEEDSSRRKDQQSQELENMEKEELTEPGNGTEEQEPDGGVTSVEEPRRLDDRGDDQPQEAVTAPRTREKEQELPFTDMCTVVTGKEDEDESSWDSESVSENLPLIRIGVDGLLLVNGQAVENPEKYLHWLHNRKGEESVPNETKGVGDLQAFTPAEPGLELTSEEKHEELSRNEDCQPQVEEERTQEWSGWGAPEALCAAALDHGDIGSPLTRENGHPRARQSPSVDSEEQDGGSGLNIKEEKTRDHEEWSGDFLMDRTSKESEPAAGDLLQVKDSWSLNDTDPNKGSPAKRKSKEKHKVRGEMNAMEDADDFTPLSESCSDNKAELCCNTHQAETETESCELLTRQTGNMEGGVAGEVLKTEPARSREALKETEETGEGARVKMQLPGKDELYSEDAERQQYDMALSALHLKTKQTVRQLQETQDRQREVVRSSQRMQDHLQKLQAGCSEAEAMVQEQGKKTAELQKLHAGMIHELKEKWETIASKYLPLNIQLKYLEQELLSIKIAQKQYEKLHEDQRTLQRDAVDLQHQVQENMAKLDDEKQAMALRDSNNDSLMSQVELRIKNLESNLQKLQAEKESNERNVEKYLQRYIRERELSKTLSHTLHRTNSKLSRVRTDILLVTERNRTVQNTLTTRPVPKSPGVTEHSAYVNRNPNFIASRNLEAAMSSPQPSPELMRRRLLKKQKNMVKNITEEVDKAAAELESWSLEAYPSGSK", "length": 1003 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6G430-1", "protein_name": "Large ribosomal subunit protein eL24", "gene_name": "LOC689816", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MLETCRNLSAIGYIWEDNSTEEYCKSSRRHGRPTSVTMKVNLCSFSGYKIYSGHERLYARTDGKFSSFLMPNVSPHSFPKGTLGKLTGLSSTEENTRKDSRKKFKRKEPTLQKFQRAITGASLADIMAKRNQKPEVRKAQQEQAIRDAKEAKKAKQASKKTAMAAAKAPTKAAPKQKIVKPVKVSAPRVGGKR", "length": 193 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6G808-1", "protein_name": "Paired immunoglobulin-like type 2 receptor beta", "gene_name": "Pilrb2l7", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MARILLLLLSAACLHTGNSAGYPKKYDYGVDQPAVLSGVQSGSIEIPFSFYFPWELAKDPQMRIAWRWKVFHGEFIYNSTQPFIHEHFKGRLIMNWTQGQTSGVLRILNLKENDQATYFSRVFLRTTEGMKSWQSIPGTQLIIHALITTPGSPSIIPSAVPTTGLEDTRGQRTPSLLNLGAMVGMVVSKVVVIIPLYGWVIFLWWKQRTQFRRDLVSEHPWKNFVPILPAESSSFL", "length": 236 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6GB91-1", "protein_name": "Olfactory receptor", "gene_name": "Or4c117b", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "TNRYYFNIFMIIMQNQSFVTEFILLGLSQNPNVENILCVVFLFIYLATIGGNMIIVVTIIYSPALLGSPMYFFLIFLSLLDACTSSTVTPKMIVDFFYERKTISFECCMTQLFAIHFFTGIEVIILSAMAYDRYVAICKPLHYSSIMTQRLCGILVIVSWAGGFLHSIIQIIFTLQLPFCGPNVIDHYLCDLFPLLKLACTEPHIFVILVFSNSGSISIIIFSILLVSYGIILFSLRAHSSEGRRKALSTCGSHITVVLLFFVPCFLIYARPTSAFSSEKNAFVFATIITPLLNPMVYTFRNKEMKNAIRKMWKRLIMVSCNY", "length": 323 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6GF85-1", "protein_name": "Ceramide-1-phosphate transfer protein", "gene_name": "ENSRNOG00000064148", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "HFFLEYLNNLKIMLIFLSPPTGGWASDHHSPTTGTHLRFLNSLGAAFSFISKEVVSKLQIMEHPRSSPQSEHCSSLQSMAAYEVSNKLLDLARRSGPLHSNSGCRTVLCLHRALHWLQLFLEGLRTSSEDARTSTLCTEAYSAMLCAYHSWIRQAVTVAFCALPSGKVFLEMLGEALPFMEQMCDISQFYVEHFLLDLP", "length": 199 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6GFV7-1", "protein_name": "Olfactory receptor", "gene_name": "Or1f21c", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSSTNQSSVTEFLLLGLSRQPQQQQLLFLLFLTMYLATVLGNLLIILAISTDARLHTPMYFFIMILSFTDVCFSSTTVPKVLANYMLRSQTISFSGCLTHLYFLCVFADMDNFLLAVMAYDRFVAICHPLHYTTKMTNKFCVLLIVGSWVLTNLNALLHTLLMAQLSFCGDNIIPHFFCDATPLLKLSCSDTHLNDLMILTEGTMIVVTPFFCILISYIHITCAVLRVSSPRGGWKAFSTCVSHLAVVCLFYGTIISLYFNPSSSHFAGKDMAGAIMYTVVTPMLNPFIYSLRNRNMKGVLRKVLILRFPSKQ", "length": 313 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6GGC1-1", "protein_name": "Histocompatibility 60b like 1", "gene_name": "H60bl1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAKGATSKCNHSLTLSLLVLLNSLGTMQVDGTDSLSCNFTVQYKVSLGQCSVNGMTVLCFDDVRQNSPVCKTEKKGNATKLCNDLNQCLSYSFYEMMKLESGLFESKGNHTLRVTVQSQYNQGEFMDGCWAFMIDRQYPFYFYPKNMTWRENQPNAIKTMSQWENNRELFQSLKFLSTGDFSLCLKKLLTDSRELTRSTIKAPDTTQPTSTTQSPSTGNSTPAMSSNQSPSTGNSTQPTSTTDYLIVFEFTAIFLALIVVSMEKKKVLPAAPLPLQYELQSPSPAVLEES", "length": 290 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6GIM2-1", "protein_name": "Olfactory receptor", "gene_name": "Or4x11c", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MADLFNVTEFIFLGLSPNKEVQRVCFVLFLLLYMAIVLGNLLMVVTVAVSRNLGSPMYFFLSSLSFVEICYSSTTAPKLILDLLAEMKSISVWGCMTQLFFLHYFGGIEIFLLTVMAYDRYVAICKPLHYTSIMNRKVCIVLVGTAWTGGFVHSFAQIVLIFPLPFCGPNTIDHYFCDVLPLLKLACSDTFLIGLLIVANAGTLSVIIFVVLLASYVVILFHLRTLSAEGRRKALSTCGSHVTVVILFFGPCVFIYSRRSDTLPVDKMIAVFYTVITPLLNPLIYSLRSAEVKKAMKNLWFRTMKADEK", "length": 309 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6GJN1-1", "protein_name": "Heterogeneous nuclear ribonucleoprotein A1", "gene_name": "Hnrnpa1-ps20", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "LSQSPPRNRTEQLWKLFIDGLSFETTDESLRSHFERWGTLTDCVVMRDPNTKRPRGFGFVTYTTVEEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGSIKEDTEEHHLREYFEQYGKIEVIEIMTDRGSGQKRGFVFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQEMASASSSQRGRNGSGNFGGRGGGFGGNDNFGRGGNFSGRGGFGGSRGGGGYGGSGDGYNGFGNDGSNFGGGGSYNDFGNYNNQSSNFGPMKGGNFGSRSSGSYGGGGQYFANPRNQGGYGGSSSSSSYGSGRRF", "length": 319 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6GJR0-1", "protein_name": "Aspartate aminotransferase", "gene_name": "Got2-ps6", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MALLHSRMATTFHPGLAAAASARASSWWTHVEMGPPDPILGVAEAFKRDTNSKKMNLGVCAYRDDNGKPYMIPSIRRQRPRLLEKIWTKNAYPSGDWLVFVRLLQRSEPVFCKDILSLAKMSFYPNHPGETTRPSSGMPACSYKVIDTMTHKTCGFDFSGALEDISRIPEQSVLLLHACAHNPMGVDPRPEKWKEMVSVVKKKSLFAFFDMAYQGFASGDGDKDAWAVQHFIEQGINVCLCQSYAKNMGLYGERVGSFTVVCKDEEEAKRVESQLKILIRPLYSSPPLNGARIAATILTSPDLRKQWLQEVKGMADRIISKRTQLISNLKKEGLFHNWQHITDQIGMFFYMIKDGRISVAGVTSGNVCYLTHAIHQVTK", "length": 379 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6GL73-1", "protein_name": "Uncharacterized protein", "gene_name": "LOC134481331", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "TALLVSLPEQNLAMARILLLFLSAACLHTGNSSGYRRVNDFGVNQPAVLSGVQSGSIEIPFSFYFPWELANDRSMSIAWIWKYFHGEVIYNSTQPFLHEHFKGRLIMNWTQGQTSGVLRILNLKENDQARYFSRVFLRTTEGMKSWQSIPGTQLIIHALNTTMGSPSIIPSAVPTAGLEDKRGQRNPSLLNLGVMVGMVLAKVVVIIPLYGWMIFLWWKQR", "length": 221 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6GLF3-1", "protein_name": "Heat shock protein 90 alpha family class B member 1, pseudogene 13", "gene_name": "Hsp90ab1-ps13", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MPEEVHHGEEEVETFAFQAEIAQLMSLIINTFYSNKEIFLWELISNASDALDKIRYESQTDPSKLDSGKELKIDIIPNPQERMLTLVDTGIGMTKADLINNLGTIAKSEDQTEYLEERRVKEVVEKHLQFIGYPITLYLEKEREKEISADEAEEEKREKEEEDKEDEEKPKIEDVGSDEEDESSKDKKKKTKTIKEKSIDQEELNKTKPIWTRNPDDITQEEYGEFYKSLTNAWEDHLAMTSLSGYVSRMKETQKPIYYISGESKEQVANSAFVERVWKRGFEVVNMTEPIDDYCVQQLKEFNGKSLVSVTKEGLELPEDEEEKKKMEESQTKFENLCKLMKEILDKKVEKVTIPSRLVSSPCCIVTSTCGWTANMERIMKARALRDNSTMEYVMAKKHLDINPDHPMVETLRQKAEADTNDKAVKDLVVLLFETALLSSGFSLEDPQTHSNCIYCMIKLGLGIDEDEVTAEELSAAVREEIPPWRVMRMPLAWKKWIKGSWEAPALCIVSLGLPQQP", "length": 518 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6GM54-1", "protein_name": "MAGE domain-containing protein", "gene_name": "Mageb11l1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MPHDQKSKLHSRENSYQAGGGAQAYGDAEEIAEAAAEAAEESSAKSQSQPGAEYSRNHRAPPKAKPSAKLILSSSSSESDESSHEESEPSVQKDRPFLHQDLIERRVAILLQYLLHNYNLKQLTTKEEMLKVITKKYEKDFPEILRKASEKLEDAFAVEVREVSSSQPSYDLISKLKLPNNGRIRAGKGLPKTGFLMSILGIIFIQGNSASEEDIWKILKKKRIYPGKKHRVFGEPRKLMTQYLVKLKYLEYRQVAHSDPPRYEFLWGPQAHAETSKMKVLEYLAKINKTTPHAISALYQEALKDEKERAEVRDEDNTDTTDQSTEGSPEKSPTASTTPVDT", "length": 342 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8J8YII4-1", "protein_name": "Coiled-coil domain containing 188", "gene_name": "Ccdc188", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MEGPEPLGPCGHSHTQHPPAPVSNNHGGCLNQPCQGFVRWPCLVPLQSTQSLESSRPFPAPGTGSGGPRMRGEAPGMFLSSEGEIPRQRAREPAGARQEEVEVEWDWPLHPGHEQGPPRQTAPPTSGPRPCPCPTLPPRGRATASSRQAPTQLQGGTLESAQQSFLQLEQENHSLKRQNQDLREQLGALLGPGQQFLPLCSEHSSCTALAWVSGNTRSRTHAAAPPAVHSLGPDPGALPQSPESARTRLLEDRAPVQLLRQQELCPGKESFVRQSQSELQQIRLSFERKKMAITEVWDGVAEVHMALNNQATGLLNLKKDIRGVLEQMEDIQLEILGERAQCRTQARKQQQMMEAAGLEAAAGCSAGLHSGLRVRGGPHTLRGAGATPAEPSQRLEAQGLTGSLLTPGGGRLPAFLEQKPSGPSKEARWLVLPQGLRGLTGPCLQHCGTWPLPEAAEKGGGRASPEGWACSWIYSHDTLCM", "length": 481 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8M9PVG7-1", "protein_name": "5-hydroxytryptamine receptor 7", "gene_name": "htr7a", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MVLGDTNRTIIAKSHGETMKSLMAEERARETGASVETFNGIMISEVLVPRLFKIAHESGEVAVAAGSGSMDMKPSSSPILLEMMEVANGTRCAEQILSYGEVEKVLIGGVLTMLTLITICGNMLVVISVCFVKKLRQPSNYLIVSLALADLSVALAVMPFVSITDLIGGRWIFGKFFCNVFIAMDVMCCTASIMTLCVISIDRYLGITRPLTYPVRQNGWCMAKMVLSVWLLSASITLPPLFGWAQNVNDDRVCLISQDFGYTIYSTAVAFYIPMTVMLVMYYRIFRAAKLSAAKHTITGFPRVEQEEVEEDEVEEDGGDGAEEPTGVDCVTVAIKLQREVEECARLPRILRGVGRRCSDRRSISIFKREQKAAATLGIVVGAFTICWLPFFLLSTARPFICGTECSCIPLWVERTLLWLGYANSLINPFIYAFFNRDLRTTYRSLLSCRYRNINRRLSAAGMHEALRLVERPEVVVSG", "length": 479 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0A8M9QGZ8-1", "protein_name": "non-specific serine/threonine protein kinase", "gene_name": "pimr118", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MLFTVLGVIALFLRERDTNNTEEEVQNDVPPVRNSDGQEIDDWCKEPSLLEPVSVHSEEPSLEEPVSAHSEEPSLEEPVSVHSEEPSLEEPVSVHSEEPSLVEPVSVHSEEPSLEEPVSVHSEEPSLEEPVSVHSEEPSLKEPVSVHSEEPSLVEPVSVHSEEPSLEEPVSVHSEEPSLEEPVSVHSEEPSLEEPVSVHSEEPSLEEPSLDLSFFSAESSWSEDLSSSFLTVESSWSDDLSSGFLTAESGCGDDEPLFVDSAEPEKLKEDKETQIIEINSHCYAIEAQLGEGGCGAVFSATRLEDGLQVAVKLSDFEEEKRFISVDGFEDPLPLEIALHFLANKGPKVKEIIELLDWKVEADRYFMVLEQPIPCMSLHEFLLDCEGIIPENKLRTIMYQTTVAAQTCCQRGVLHRDIKLENLLINPDTLEVKLIDFGCGDLLTEDSFQYFRGTREYFPPEFSSTGRYHGEPATVWSLGVVLFLLVFYRFPEQSDLPRMNNRRLRIKGLSRDCCDFFHGCLQLDPKDRLELQNLSSHKWIRTRTRRNDENCPNLTDGSSHSNHPITSN", "length": 567 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0A8V0WZU8-1", "protein_name": "Ig-like domain-containing protein", "gene_name": "CHIR6B2", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MAPMVVNLILGWWLVAVSRAQKLPRPSLSLHPSQGASLGDNVTLRCHLPQPAAWVRLYRYQNPTYIEQKDNVQDMAEFSLTSIKQEDAVIYQCQYQGLAPAGTSQKSDPMELLVTDHRYPPPGISLSPKEHVEMGSNITIQCWNKDYGASFLLHKGGHSAPIQHQEPDYWGTATFTLFGVTPADSGTYRCSYRIGGCCLLFSPLGDNVTLEVIPRPAPPGVNGGPSRNLVAAVAGGCAAAIVIITVSFLLVALRRQMQRAERPGATPRSPEAVQFQVSPGDSEGLTYAQLQAVTPSTHPPTSSTTPEPPIIYAEVGTRGPR", "length": 321 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0XEA0-1", "protein_name": "C-type lectin like 8, MHCY region", "gene_name": "YLEC8", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MQSVQIPILKHKVSTPAEGERLNHFSEHKAAPEPTAHQRRRIPTSSDPQLPEEDVQILLLESNTSTPAMGEGDQQETFSEHQAAPEPLGQSGGHQWGSWCHGMGRRRSCVQLIAVHAALGALILMLVVLVISTVCRRAPIPPFSAFGHACPNAWVGFQGKCYYFSKEENDWNSSREHCSAHGASLATIGSAEEMDFMMRFQGPANCWIGLHREEEDAQWTWSDGTAFTNWFELRGGGRCAYLNGDRISSSLCHLHKHWVCSRADHYVLWKQKVHPQ", "length": 276 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0XED4-1", "protein_name": "C-type lectin like 18, MHCY region", "gene_name": "YLEC50", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MQSVQIPILKHKVSTPAEGERLNHFSEHKAAPEPTAHQRRRIPTSSDPQLPEEDVQILLLESNTSTPAMGEGDQQETFSEHQAAPEPLGQSGGHQWGSWCHGMGRRRSCVQLIAVHAALGALILMLVVLVISTVCRRAPIPPFSAFGHACPNAWVGFQGKCYYLSKEENDWNSSREHCSAHGASLATIGSAEEMDFMMRFQGPANCWIGLHREEEDAQWTWSDGTAFTNWFELRGGGRCAYLNGDRISSSLCHLHKHWVCSRADHYVLWKQKAHPQ", "length": 276 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0XEJ6-1", "protein_name": "Sulfotransferase", "gene_name": "LOC769841", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MVCRAAAPNSHPSTMPVHYVTYKGIKFPPAYNSVHSLSFAHNEFLVRDDDVFNITYPKSGTVWMTEILSLIRSHGHPSWNQTVLNSDRMPWFSTRLGLEAALSYPSPRLLTCHLPRHIFPKSFSHSTAKVIYTLRDPRDVVVSYFYFCKMCNSYEDPVSFEQFLRDFLSGELPHGSWFEHVRGWMQMKDRENFFFITYEELKQDLQGSVRRLCHFLGQNLDDDAISSVVQNASFMAMRQNPMCSSILLPADIMDQTKGQFLRKGICGDWKNHFTVAQTETFNRIYLEKMRGLNVAFPWDRDQDPDLTEQ", "length": 309 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0XGU1-1", "protein_name": "C-type lectin domain-containing protein", "gene_name": "YLEC62", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MQSVQIPILKHKVSTPAEGERLNHFSEHKAAPEPTAHQRRRIPTGSDPQLPEEDVHISVLESNTSTPAMGEGDQQETFLEHKAVTEPLGQSGEKPQWGSRCHGTGRRRSRVQLIAVHAAVGALILMLVVLVISTVCRRASIPPFSAFGHACPNAWVGFQGKCYYFSKEENDWNSSREHCNAHGASLATIGSAEEMDFMMRFQGPANCWIGLHREEEDAQWTWSDGTAFTNWFELRGGGRCAYLNGDRISSSLCHLHKHWVCSRADHYVLWKQKVHPQ", "length": 277 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0XGW1-1", "protein_name": "NHL repeat-containing protein 3", "gene_name": "NHLRC3", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MAAPAVLWRLQRLSAAERLEARLSGAVRKEPGRGEARQSEKKPHSPHCPLRCSYACPGRTPMTSESGRKALSHLGRQQQCLNKMAELRARLEAFPAPECLFKTLNPFMGFLRLFFAPQPLGGEQALFRAAQCAEASPRIPAPQAWAGRSRGCHGNAARPASMGRKQAVGPRLVMAGALLTLLGLLWGSQMLKAFDYFSSWKGDGEQQMYKLDISWPKIPEYFSGQTFCVAVDSLHGLVYVGQRGDDIPKVLVFSVEGYFLYSWNDTVEMPHGIFVLNTATDSSVWITDVGSGKYGHTVKQYSPSGKLLQVLGTPGNAGSSLNPLQFDQPAEIFVEESGEMYIVDGDGGMNNRLLKLSQDYKEIWLSGENGTGIGQFKIPHSVTVDPFGRVWVADRDNRRIQVFDKVTGEWLGAWSSCFLEDGPYSVRFTGNYKYLIVAHLNINRLAILAAPPVGEIGDCAIVSTIQLADETKPHLVDVDVKSGAIYIAEIGAQQVQRFVPLS", "length": 502 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0XPN1-1", "protein_name": "Ig-like domain-containing protein", "gene_name": "CHIR2A13", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MAPMAVALILGWWLVAASRAQQLPRPSLSLHPSQGVSLGDNVTLRCHLPRPAAWVWLYLEGRWSYAKYIDKKQDTTEFSFLSASHDQAGTYLCQYQVSESEDVSVTSDPVKLVLTDRSFPPPHISLHPEERVGTGTNVTICCWNKDYGATFLLHKDGRSDPIQRLVPDDVGAVSFTLFGVTPADSGTYRCSYHPKNYPFLSSPLGDSVTLEVTPTPAPPGAELVSRGNLVVAVVRGCAAALIFGLGVFFVIDARSLWIRRDESLGGEGI", "length": 269 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0XPP6-1", "protein_name": "SUN domain-containing protein", "gene_name": "LOC776146", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MEQQGHGERGNWQTKVWKTVALVLVTVAVASFGVYCVGGLVEGIKTTAGVTARLVRRDGEIVSLDEELAKVQRQLHVLQWRARDITERALHEALRRTELPGFTGEAVQKIIHQVLEKLEESPFQMTNYASKTSGAAIVRSKTSPSWIGSGRVFWQSLPLVAYMRPPEVILEPDNHPGNCWPFPGSQGHVFIKLPVAVFPTAVTINHGVPAAAYHADSISSAPKDFAVYGLQEEDDETGTLLGEFIFMPGQAPGQTFQLKNEHSAFIKYVRLQVLSNWGHPEYTCVYQFRLHGDPAPDGDARGKLSA", "length": 306 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0XQE0-1", "protein_name": "Ig-like domain-containing protein", "gene_name": "CHIR6A8", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MEPMAVNLILGWWLVAGSRAQQLPRPSLSLHPSRGVSLGNLVTLRCHLPRLAAWVWLYRGGGWSYKKGKKKEQDAAEFSFASTLREHAGRYRCQYRVYESAEVSVESDPVELVLTDVRYPPSSISLQPEQHVGTGTSVTIHCWNKDYGATFFLHKDGSSDPLQRQDSSGGGTATFTLFGVTPADSGTYRCSYRHWRYAFMSSPLGDSVMLEVTPTPAPPGAELVSRGNLVVAVVRGCAAVLIFALGVFFVIDARSLWIGRDESLGGKGI", "length": 269 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0XTD2-1", "protein_name": "Coiled-coil domain containing 97", "gene_name": "CCDC97", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MKEDPKEAEGPTASKWIPIASNGNPTASKWIPIASNGDPTAPKWVPISSNGDPNWVPISSNRDPMASKWIPVSSDRDPTVTKENPPSSNETPAAEWDPKVPPEGRPVEEGDPKASPTEDPPAEPDPKASNCAPLSSHWAPEAAVWDPTSPHRDPTAEPQCSASPEQHRAAQRDPASPMEEDRYPATHGVRPATRADPAPYGDHPEAEEDPLPAAVEAMLAAVAASPVRVRSQQQGDPELTAAERRRDLRALFLRKPLVFLERFHGALQAEHLPCFAHLPPRYEVAFYCRQVRARRQQNPQTGLSRWPRRPGARTRLRNRRYAALRQLIAGGEYFSEEEMRAREPLLYEHYIGQYRDAETPPGTPPCPPHPGTPPGTTWAAALLRSVEEAAVQQRLQRQRLREGDSGEEDEDEDEAEEPHIPDAGELEVLREEFRSRMYQRFLDGEDRDFDYSQVDENPDMDNLDIESRDAEERYFDEEEPSAAPQLE", "length": 487 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0Y889-1", "protein_name": "Transmembrane protein 65", "gene_name": "TMEM65", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MSAWLGRAVLLLGRPGGPAAPSSSSRLCSLRGPPRCCCRRRLSSLRGGADGLLPARGAPPGRALGTHPKKEPMEALNTAQGARDFIYSLHSTERSCLLRELHRFESIAIAQDPIAARASCQQYGETWAHQEPSGACSSVHSQAYHQKEAVPSSNCPSTKYDRTHYLWPPLMAEAAGKPGRCPHCCAEGWSSEKLEVAPPSPGQLRHVFFHNALPFVGFGFLDNAIMIAAGTQIELSIGVVLGISTMAAAALGNLVSDLAGLGLAGYVEALASRLGLSIPDLTPKQADMWQTRLSAHLGKAIGVTVGCILGMFPLLFFGDEEEKLEEKN", "length": 328 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0YA34-1", "protein_name": "SWIM-type domain-containing protein", "gene_name": "LOC100859602", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MAERGQLPPYAKRLCCRPGYGSGCRLGQQAGDTGPGSGTFCAGPSSAAAAAAAAAAATAASLVLLPLGKTQSPESLLDIAARKVAEKWPFQRVEEQFERIPEPVQRRIVYWSFPRSEREICMYSSFDTGAEGFTAPGSAAGNTASGGAVDAVADENRLPFRRGMALLDGGCVDNVLQVGFHLSGTVTEPAMQSEPETVFNVAISFDRCKITSVTCSCGNKDIFYCAHVVALSLYRIRKPDQVKLHLPISETLFQMNRDQLQKFVQYLITVHHTEVLPTAQKLADEILSQNSEISQVHGAPDPTAGASIDDENCWHLDEEQVQEQVKLFLSQGGYHGSGKQLNLLFAKVREMLKMRDSNGARMLTLITDQFMADPRLLLWRQQGTAMTDKYRQLWDELGALWMCIVLNPHCKLEQKTSWLKQLKKWNCVDVCPWEDGNHGNELPNLTNALPQGANANQDSSNRPHRTVFTRAIEACDLHWQDSHLLHIISSDLYTNYCYHDDTESSLFDSHGWPLWHEHVPTACARVDALRSHGYSREALRLAIAIVNTLRRQQQKQLEMFQARKKELLYRGITSITNLEGWVGHPLDPIGTLFSSLMEACRVDDDNFHGFSDFMENTSQHKSLEYQHLPAHKFLEEGESYLMLAVEVALIGLGQQRIMPDGLYAQEKVCRNEEQLISKLQEIELDDTLVKIFRKQAVFLLEAGPYSGLGEVIHRESVPMHTFAKYLFTSLLPHDAELAYKITLRAMRLLVLESTAPSGDMSHPHHIASIVPNRYPRWFNLSHIESQQCELASTMLSAAKGDVQRLETVLQSIQKNIHSSSHIFKLAQDAFKIATLTDSLPDITLLKVSLELGLQVMRMTLSTLNWRRREMVRWLVTCATELGVHALDSIMQNWFTLFTPTEATSIVATTVMSNSTIVRLHLDCLQQEKLAGSARTLALQCAMKDPQNCALSALTLCEKDHIAFETAYQIVLDAATTGMSYSQLFTIARYMEHRGYPMRAYKLATLAMTHLNLSYNQDTHPAINDVLWACALSHSLGKNELAAIIPLVVKSVKCATVLSDILRRCTLTTPGMVGLQGRRNSVKLMSLDKAPLRQLLDATIGAYINTTHSRLTHISPRHYGEFIEFLSKARETFLMSHDGQIQFTQFINNLKQIYKGKKKLMMLVRERFG", "length": 1168 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0YDY5-1", "protein_name": "SKA complex subunit 1", "gene_name": "SKA1", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MEAEGLEALSRHLAAKIGLIKRLLQLRGLGRREMLAEVGMEVAVLHGLLGRMEEEVNQRRQLAAALQEMRKRAEKEKWEAERLQLVKKAAKEAPLVNDAPLISDEEFESVPGYMRGRLTLAQTNAALRALHAAAASKYRLLRHPPKSLPSSSRALCHRFREEETKETQGLTFVVEADLKEFTQLKVDRTFHRIVGVLRHCRRLREVRGARLVRYVLP", "length": 217 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0Z0M2-1", "protein_name": "Tumor necrosis factor ligand superfamily member 10", "gene_name": "TNFSF10", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MLPAGGPSPAHTCGAVLVAAVLLQSVCVAVTYIYFTNELKQFANADLVHSCERGHPLSPPPPPDVPQTAVTRPTKAEGGAAPVGASCSIGQSRRAQSDLRQRAANAASPQHGPPCAARSRARCSCPRCTAGPRVCRRTQQKLWDTYSRSGTACLTGEELGDLIQNLDVVESKDRVADPCWQVKWHLGKLIKKMMSRILQENMSAINGDRTQALPRRDEPPQGPTLRIAAHLTGSSKRSSASPHIDYLSYRGIGHKIHSWESSRRGHSFLYNVELWNGELVVPQTGFYYIYSQTYFRFRENEDEDSGLLERIKNPKQLVQYIYKLTNYPDPILLMKSARTSCWSKKAEYGLYSIYQGGVFQLKREDRIFVSVSNSDIVDMDKEASFFGAFMIS", "length": 392 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0ZCD9-1", "protein_name": "Mab-21-like HhH/H2TH-like domain-containing protein", "gene_name": "LOC124418390", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MALVLVLALLVRALIVSGSDHAVMLERVQQHEKEQRNGEQSWVDMSALLFTLLHYWKIWFCTGLFVFLFWNMWRSLKRKQHEEGGQQEQQEREEQVEEVEREEQQEQVEEEEQLERVEELEQEDQVEHVEQEEQEEREDQGEQVQQEEQVEEVEQEDEEEEYFHHSALTRYIARRAWEKMQGKATKCVLVEELMSDLLQTYTFVCSNSFYPVLQPAIGVGSAFEGWSPCEEDIVYRLLVPIKAPHGHVFHPELGEEGEVLARNSRIRVELVCMCTREQQLGDVLCFLHHSEEELSQNQQPSLLQTLCTGSYLDVQKTAAWFNKQVPRTWRLTHRAHRYGLKVLPSSRSCKLQVTDTSSGEKVHVELLFGVQQGNLDIFLSSQNAEAVFTPSTTWPQSCAVAERKYFEYVARTAGPNSCHLVCLRLFAHILVGMGFSTYAIKTLLLHLLAIIPLEDWRRRHFLSRLENLLQYLQYCLNDKVLNHFLLGNATMPDEVVLPQAFQTASPLNLFQHLEQDPDAHSRVLRDFKELKDRLFRLLLFGR", "length": 542 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0ZD85-1", "protein_name": "Mab-21-like HhH/H2TH-like domain-containing protein", "gene_name": "LOC124418382", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MALVLVLALLVRALIVSGSDHAVMLERVQQHEKEQRNGEQSWVDMPALLFTLLHYWKIWLCTGLFVFLFWNMWRSLKRKQHEEGGQQEQQEREEQVEEVEPEEQQEQVEQEEQLERVEELERVDQVEHVEQEEREDQGEQVQQEEQVEEVEREDEEDEYFYHSALTRYIARRAWEKMQGRATKCVLVEELMRDLLQTFTFVCPNSFYPVLQPAIGVGSAFEGWSPCEEDIVYHLLVPIKAPHGHVFHPELGEEGDMLARNSRIRVELVCMCTREQQLGDVLCFLHHSQEELSQNQQPSLLQTLCTGSYLDVQKTAAWFNKQVPRIWRLTHRAHRYGLKVLPSSRSCKLQVTDTSSGEKVHVELLFGVQQGNLDIFLSSQNAEAIFTPSTTWPQSCAVAERKYFEYVARTAGPNSCHLVCLRLFAHILVGMGFSTYAIKTLLLHLLAIIPLEDWRRRHFLSRLENLLQYLQYCLNDKLLNHFLLGNATMPDEVVLPQAFQTASPLNLFQHLEQDPDAHSRALRDFKELKDRLFRLLLFGR", "length": 539 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0ZE07-1", "protein_name": "LIM domain only 1", "gene_name": "LIMO1", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MVLDKEDGVPMLSVQPKGKQKGCAGCNRKIKDRYLLKALDKYWHEDCLKCACCDCRLGEVGSTLYTKANLILCRRDYLRLFGTTGNCAACSKLIPAFEMVMRARDNVYHLDCFACQLCNQRDSNPMGWYGSHPVTAAWEAEARTTSLGQPGVRAAELP", "length": 158 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0ZGC1-1", "protein_name": "Ig-like domain-containing protein", "gene_name": "LOC124416945", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MVAGSPALLLLLSLGLCFTGAQGQGNTMAVSFLNRSMKHPKEGQRLGLECHTYKTSWGVSWIRLDKDGNLHFIVYISKFSSTTFPGNKGASSQFEVSKQGSSYRLTVKNFRAQDQGIYFCIANINQVLHFSSGQRAFFPVTTTTAAPTTLRAVTLTATTQSSQVTMKDISQHSPDPGRSKENMPNFCCKLVMWVNLACACLLLLTAITITTTHCQRPSSP", "length": 220 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0ZPB4-1", "protein_name": "trypsin", "gene_name": "LOC107049069", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MKFLVLVAFVGVAVAFPIRDEDDDKIVGGYSCARSAAPYQVSLNSGCHFCGGSLISSQWVLSAAHCYKSSIQVKLGEYNLAAQDGSEQTISSSKVIRHSGYNANTLNNDTMLIKLSKAATLNSYVNTVPLPTSCVTAGTTCLISGWGNTLSSGSLYPDVLQCLNAPVLSSSQCSSAYPGRITSNMICIGYLNGGKDSCQGDSGGPVVCNGQLQGIVSWGFGCAQKGYPGVYTKVCNYVSWIKTTMSSN", "length": 248 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V1A1Z3-1", "protein_name": "Bridging integrator 2", "gene_name": "BIN2", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MPSLYHPNAIPVPFPSHPCTTLMSSLTHHIIPVPSSCLPNVIPIPYHPHVISTLSLLHPHFIPMAFLNLPHAIPVPPLIHSCAVPMSYHPFPISFSFPSPSHPSIAPMQSPSYPYPTPVPPPFHLLPIPIPTPVPPPCHSCSIPIQPRCRLHAILVPFPPHCHPHPVPAPSPPHPSAIPMPSHFHPHPIPVPPHTISIPSPPQCHLHAIPVPSPTHPHPIPSHPRFPHPLWAQGHPHPRGSNLSPPIPPPPPNTFALQNEGNKLYKDLKAFVGAVKVMHESSRKVAETLQEIYSTEWDGHVELKAIADSNDLLWDDYEAKLGDQALRLMENYLAQFGDIKERIAKRGRKLVDYDSARHHLEALQNAKKKDEAKIAKAEEEFNRAQAVFEELNRELREELPVLYGSRIACYVTIFQNISNLRDIFYKEMSKLNRDLYEVMGKLDKQHSSKVFIIKGVPSKRRSLLISAPVSPPAAYPCPGKAPNWDPSSGAEQTPTSPRVGSDATEDVPNGLAAPGPAEPGAPMPGPPPASPTSVRSASESESECSEESREIDLSPKEMEVSVGSGCPEYPKTEGAAKGEVEGIAASMASMIVSEAIAAATGAAPGDSDGVGGGDSTDSEISPAEGAWGGPSPGGSEERVEGTDVSPEVGSDAGPCEHGTPEPPQQDVSCDPPQDPSESLTPL", "length": 682 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V1A7J1-1", "protein_name": "Mitochondrial transcription termination factor 4", "gene_name": "MTERF4", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MAGRLLGLLRARAPRAVLPAPGPASRHRCGTAGPEEGEAAELLAMGFSQAQARRLRLLRPGLEPQRRAEAAAQLLLLGLSAEAALGLLERSPGLLRMETARLKERAEYLRRLGLEGERGGPLPRGVHAAPAEDGGGGAAAAGAVSVHGRAADRAAAELPRGAAGGAGPRAAPLPGAGRRAGRSGGVAGAARPALSSARLHAQYAYFRMGVRQKEMVKARLFRTPFAELRNRHVFLERRGLYRTPHKGQSQSGNPALRDVLRPTEGDFVAGVARASPDEYEVFKRLLAREEEEMEEEEEEDEEEEEEEEGSAALHAEGGDRDWHSSEPSPIAPCPPAPQ", "length": 338 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V1AKD9-1", "protein_name": "Borealin", "gene_name": "LOC121107214", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MAPARRKAAAGARGRKLSAFLKDFDREVRSRVEQLRTNGERLVKEMENLYDVELLRLPAALREMNWLEFFAKGGSQKVVEEAVTADLGITEINKLTAELIQTPLKIVTKEKSKQGIEATEEAAEVPLLPPAKKAKHDSQLLLEQAAASTNPRNGKVRTSTKKAPVSRSRRAPSARVKRVSKRSSKSSFITPATGRNLDLCARGGASIVTPRFDSRVFKTPGLRTPAVNERVYTISANGSPLADGNDVFITVPVGGGESIRLTASDLTKKNLLHLNPEARGIMKKLSVRLAQACSSAKTHR", "length": 300 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V1AMC7-1", "protein_name": "ODF3A protein", "gene_name": "LOC121107218", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MPASMDGAWVGTWRPHRPRGLISAQFPSPGPQYSIPGTTGYVGHSPTKARAPAYTFRGTKPPAAGSCGPGPCYFVEPAITRNGKYVAPGAQLRGRPVTKTTVTPGPSDYRTEAANRHVFKCPPVQSMAFRREPLRTDHPPGPGTYTLPRLMGPNTVYTSASPCYSVRGRSQRGRFDEDLAKTPGPAALPKVPVDAYKTRAPAYTMAARPKAGEGKAAKPGPADYSVGRVTLIKPQAPASTFGIRHSLYTTPLIVE", "length": 255 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8W4F7J1-1", "protein_name": "40S ribosomal protein S26", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MQPIHCTNCARCMPKDKAIEKFIIRNIVEAAAVGVISEVSVFAAYVLPKLYAKRHYCESCAIHSKVIRNRSREAQKVRTPPPRFRPTGAALRPPPKCM", "length": 98 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4F8K9-1", "protein_name": "Olfactory receptor", "gene_name": "LOC110258234", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MRNHTVTTFILLGLTDEPQLKTLVFIFLFLTYMLSVTGNIISLTSTDSHLKTAMYFFLQNFSFLEIAFTSACIPKYLYNIATGDKTITYNSCATQLFFTDLFAVTEFFLLATMSYDRYVAICKPLHYVTIVNHTVCRRLIFGSWLAGLLIIIPPLSLGLKLEFCDSNVIDHFVCDAAPLLKISCSETWLIEQMVIVCAVLTFIMTLMCVVLSYVHILKTILQFPSAQQRKKAFSTCSSHMIMVSISYGSCIFIYVKPSPKDSLAVNKGVTILTTSIAPMLNPFIYTLRNKQVKQAFNDAIKRIALFSKN", "length": 309 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4F9E2-1", "protein_name": "UPAR/Ly6 domain-containing protein", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "RLEFSSLSPAEVPLVAAAGGRGAFDMRCHECDTKNTFACDHIVTCPRGIRRCLTLSIRLSSREIYVYKGCTRNCTFIYADEQPPPGERKPPRSNSLYFVQCCNAITCNRGGPINLEKDITPPLILEEELGGTVRLGEATLFLSVASVLVSHALT", "length": 154 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FBC5-1", "protein_name": "Olfactory receptor", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MLTHSFSFFSSSSSSSTYSSSYPLLPLLLQPQNQFRIWALKDYGQRNSTSLHDFILLGVVATFYLITLVGNTAIILASLLDSHLHTPMYFFLRNLSFLDLCFTTSIVPQMLLYVYMWLGSIECLLLAVMSYDRFTAICKPLHYLVIMNPHLCLKMIIMVWSISLANSVVLCTLTLNLPRCGNNLLDHFLCELPAMLKIACIDTTAVELSVFALGIAIVLTPLILILISYGYIAKAVLRMKSTAGQRKAINTCGSHLTVVSIFYGAIIYLYLQPGNSASKDQGKFLTLFYTIITPSLNPLIYTLRNKDMKEALKKLMRVDHKSTKSKRTWKS", "length": 331 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FBS2-1", "protein_name": "Olfactory receptor", "gene_name": "LOC110258626", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MRNHTAITTFILLGLTEDPQLQLLLFLFLFLTYILSVAGNLTIITLTLLDPHLKTPMYFFLQNFSLLEISFTTACIPRFLYSISTGDRTITYNTCFTQLFLTDLFVITEFFLLATMAYDRYVAICKPLHYMTIMSNKLCKTMVVCCWLAALLIILPPFSLCFHLEFCDSNLIDHFACDASPLLKISCSDTWLIEQMVIACAVLTFIITLVGVVLSYIYIIRTILKFPSAQQRKKAFSTCSSHMIVVSITYGSCIFIYINPSAKEEVNLNKSVSLLISPISPVLNPFIYTLRNKQVKQALHDSLKKTAFLLRK", "length": 312 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FCJ2-1", "protein_name": "Histone H2A", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MSRKRNLPQCNPPKKQALSRSSRAELQFPVSRVDRYLREGRYAQRLSSHTPVFLAGVLEYLTANILELAAGEAHSSRKMRIAPEHVQRARSHNETLSSLFQASSVSRGAEEEAEEPLPEAGR", "length": 122 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FD42-1", "protein_name": "Olfactory receptor", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MTALNHTGVSHTVFYLLGIPGLEDQHLWISIPFFISYVTALLGNSLLIFIILTRRSLHEPMFLFLCMLAGADLVLSTCTVPQALAIFWFRAGEISLNCCITQLFFIHSIFVFESGLLLVMAFDRYVAICYPLRYTTILTHPLIGKIGVTIVLRSYCAIFPIIFLLKRLTFCRSNVLPHTGCEHIGLAKYACNDIRVNIWYGLFVIVSTLLLDILLIFVSYMLILHAVFHMPSQDARHKALNTCGSHVCIIILFYGPGIFTALTQRFGRHIPAHIHILLANVCILVPPMLNPIIYGIKTKAIQEQVALILFPKYR", "length": 314 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FH98-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "VCHYGNYYSGLSCSCGYGCGYSRCGCNCDYDKCGYRCGYGGYVYGCCHLSCCGRYRPYGFY", "length": 61 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FHY5-1", "protein_name": "Ig-like domain-containing protein", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "DTGSCGAIVLTQTPLSLSVSPGEPASISCRSSQSLEEYGKNWLSWYQQKPGQSPRLLIYQATNRASWVPERFSGSGSGTDFTLKISRVEAEDAGVYYCQQYKEFPPTVIQPLTQTPLLGAQLHTWLCVVWGAEGQKL", "length": 137 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FIZ4-1", "protein_name": "Envelope glycoprotein", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MRPTLSRRHLPTRGGEPKRLRIPLSFASITWFLTLTITPQASSKRLVDSLTSPKPLSLTWLLTDSSTGITINSTQREAPLGTWWPELHVCLRLVIPGLNTMSTPPDILRAYGFYVCPGPPNNEEYCGNPRDFFCKKWSCVTSNDGYWKWPTSRQDRVTFSFVNSYTSYNQFNYGHGRWKDWQRQTQNRQISCSPSDLDYLKISFTEKGKRENIQKWINGMSWGVVYYRGSWGGEGSILTIRLRIETQMEPPVAVGPNKVLTEQGPPIQGQRPSPNPSDFNTTSG", "length": 284 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FJ61-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MSSTKNKHLMKGSKKGPKKKVADPFSKKDWYDGKAPAMLTKKRNIRKTLVTGTQRTKITSDGLKGHVFSSEPCQSAE", "length": 77 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FJT7-1", "protein_name": "G-protein coupled receptors family 1 profile domain-containing protein", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MKNPEVRKIHSAVFLITYLSTILGNLLIVVTMVTSQSLRSPMYFFLTSLSLMYVTYSSVIAPKMIVDSFSETTAISLEGCMAQLFAEHFFGGVGIILIIVMAYDHYVVCCLLLGGAWVGGSIHATIQLLFICQTPFCGPNVIDCFMCDLFTLLKLACMDTHLLGILVILNSGVMCMAIILILITSYVVILCSLKSYSFEGQHKALSTCGSHLIVVVLFFVPCIFLYVMPVATYPIDKAMAVSFTIVAPMLNPLTCTLRNAEVNNAMRKLWMKQNTLCYH", "length": 279 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FKQ6-1", "protein_name": "Large ribosomal subunit protein uL5", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MVQDQDEKKNPMWELGIHKLCLNICEGESGNRLTRAAEVLKQLTGQSPVFSKARYTVRSFGIRRNEKIAVHCTVRGAKAEEIFERHLRVREYKVQEHISLGTKYDPSIGIYSLDFYVVLGRPGFSFADKKHRTGCIGAKHGISKEDAMSWFQQKYDEIILPGK", "length": 163 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FKY3-1", "protein_name": "Large ribosomal subunit protein eL27", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MGKFVKPGKVVLVLAGRYSGRKAVIVKNTDDGTSDQPYSHALVAGIDRYPRKVTAAMGKKKIAKSSKIQSFVKYSVDIPLHKTVVNKDVFRDPALKRKARREAKVKFEERYKTGKNKCFFQKLRF", "length": 125 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FLM5-1", "protein_name": "Small ribosomal subunit protein uS14", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MGHQQLYWSHLRKFGQGSRSCCVCSNWHGLIRKYSLDMCHQRFCQHMKDPGFIRLD", "length": 56 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FNC8-1", "protein_name": "Olfactory receptor", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MGQRNQTSSLADFILEGLFDDSPAHAFLFSLTMVVFLIAVSGNTLTILLICADPRLHTPMYVLLTNYLSGTKSISFVGCATQYFLFLSLGCAECILLTFMSYDRYVAICHPLRYAVLMNRKVGQMMAVMSWLGASVNSLIHTVILMHFPFCGHRNIHHFYCEFPAVVQLVCGDITVYEIAVYIGDIVLLLLPIALISASYVFILHSVIRMHSAGGKRNAFATCSSHLTVVSLWFGACIFSYMRPRSQRTPLQDKVGSVFYTIITPTLNPLIYTLRNKDIAKALKRVLGREMITQNPKVRLP", "length": 301 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FP10-1", "protein_name": "Ribosomal protein L19", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MSVLRLQKRLASSVLRCGKKKVWLDPDETREIANAKSRQQIWKLIKDGLSIQKPGTVHSRARCQKNTLRKGTASAGMPKKSVPERDGNVFKNKRILMEHTHQLKADKARKKLLADQPEARRSKTKEARKRRQERLQAKKEERNRTEVETKFCRLI", "length": 155 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FP36-1", "protein_name": "Small ribosomal subunit protein eS24", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MQDTASIRTRKFRTNQLLPGKQRVIRVLHPGKATVPKTEIWGKLAKMNKRTPDVIFVFGFRTHFGGGKTTGFGMSHDSLDDYTKTNEPKHKRARHGLYEKSKTSRKQRKERKNRMKKVGGTAKANAGAGQKGGV", "length": 134 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FQE1-1", "protein_name": "Olfactory receptor", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MTALNHTGVSHTVFYLLGIPGLEDQHLWISIPFFISYVTALLGNSLLIFLILTRRSLHEPMFLFLCMLAGADLVLSTCTVPQALAIFWFRAGEISLDRCITQLFFIHSIFIFESGLLLVMAFDRYVAICYPLRYTTILTHTLIGKIGVTIVLRSYCAIFPIIFLLKRLTFCRSNVLPHTGCEHIGLAKYACNDIRVNIWYGLFVIVSTLFLDVLLIFVSYMLILHAVFHMPSQDARHKALNTCGSHVSVIILFYGPGFFTTLTQRFGRHIPAHIHILLANVCVLVPPMLNPIIYGIKTKAIREQVAHLLFPKQK", "length": 314 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A9J7F7T0-1", "protein_name": "Protein transport protein Sec61 subunit gamma", "gene_name": "LOC100757015", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MDYVMQFVEPSGQFVKDSIWLVKRCTKLDRKEFQKVAMSTAMVFAIMGFTGFVKLIHIPVNNIIVGG", "length": 67 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0A9J7GY23-1", "protein_name": "Tetratricopeptide repeat protein 16 isoform X2", "gene_name": "Ttc16", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MTDSSTEESVNVQTQKIPKLQVPETRETTLQRIFGTSQVFYSVSGVVKPRLTESTVPFRVREYYHQGHHCLEQEDWEMAVLYFSRALHLNPDQVEFYIFRAEAFIQLCDFSSALQNLRRAYSYEPENSKYLERLAFVLYLQGQCLYELCDFQEALYVFLQASDLQPQNPSFSYRCMACLLALNRHQDCLSLVTREVKQGRATADVYILRARIYNFFQKPKLCYQDLRSALLFNPKHPQAKGLLQVMVDQAKKSLQDASILAVQGKLHRALKRISCAIENNPLDPNLFLFRGTLHRRLQQFDPAVEDFLKAMDMVTDSQDNLVQKTQRQLLLTYNDFAVHCYTQGAYQEGVLLLNKAIRDEQNEKGLYINRGDCFFQLGNLAFAEADYKQALELCPKDEGANLRMGVLQEKMGLCEQTRRQFQKAEDHFSAAIKYNPVNAQYYLHRAKNRQLLQNIVGACQDIATVLLLNPKYPKMAPLMAKLFPGMSVEEVLNSHVAQLAKLQLRRMIESGPKASHPQSIVAKRLIERQKAQALMESWNWEQLFTRNPEEEVAPSESLQGKTLREKIEFKREVVEEKKVKILRKVTSLSDSYVDQTSSGSEFSILSPSTLETEVSTMEYKSTSNTAASSAERLLPQYLVTTKYKESLGLSMAPNVTQVSEDLHKSLTENIPDDGPRHHSSKAEATQRPKPRKTEPSQSLGKQRPSQRPSITEATKGPKPRKNRPALSPRQRLRRAKAVQAQNWKPRTNSNSQKTSSLLSNIAVIISSSNEAQDQSPVPSKADDISSYNDSTATSSTNTDSLRLSIHLSKPKYSKDQSPSHNKEEVSPTSNNYAAP", "length": 835 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0A9J7GZF8-1", "protein_name": "Protein EURL homolog isoform X2", "gene_name": "C4H21orf91", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MIIKRKATVIHHKGTMNEEEQFVNIDLNDDNICSVCKLGTDKETLSFCHICFELNLEGVPKSNLLHTRSLRGHKDCFEKYHLIANQDCSRSKLSKSTYEGVKTLLTKKINWIVQYAQNKDMDLDSECSKNTRHHLFNFRHKPDKKLLPQFDSQVPKYSVKGIAGSTGGLSSYTQRILEQRENTDFGLAILQDSDALWPHKHNQAQKKEETSSGPENVQTQNPRYSREELNSMTLDEVEQLNTKLQQQIQEVFEELTHQVQEKDSLASELHVRHVAIEQLLKNYSKLPCLQVGRAGPRSHLPINN", "length": 304 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0A9J7JMJ4-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100771730", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MDFVNISLVTEFFLVGLTDQPELQMPLFFLFLAVYLITALGNLCLIILTVLNSNLHTPMYFFLFNLSFIDICYCSVFTPQMLMNFILRENIISYMECMAQVFFFCFFVVSECYVLTSMAYDRYMAIYNPLLYNVVMSPNLCLNLMFGSYFIGFSNAVAHTVCMLRLTFCDTNIINHYFCDIPPLLQLSCTSTYVNKLVIFVFASINIIVPTSTILVSYGFILSSIFHISSSEGRSKAFSTCSSHIIAVSLFFGSGALVYFKPSSAVYMNEGKISSVFYTNVVPMLNPLIYSLRNKDIKVALMKSLNSRNL", "length": 310 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0AA74KSW7-1", "protein_name": "Predicted gene 3002", "gene_name": "Gm3002", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLNSSKLGVWAAGVPPSSPTLLFRRWVMKVESLISQPMTSGKNELQDHLIFISEKALHKRLFQKENGDEGVTRPTEKEEGILSHEKGRRKWLWRRHRSARNTSTQNSKMTKKRSKINELEELKLDMRKISNDMEEMCGILNLYMYEDLNYRMNTEFNIIKSQHEKTMLDMNKMIQSIIGSMQYSKELIEDNYSYSIKEDHLLRECTQLHENVRILLNENRRLLVEQAGHKCPVGKKRGSLRRPARTSVSQVPRNTSPAESRTWHRPGHDLPQREVLEEEH", "length": 280 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0AAA9RU54-1", "protein_name": "Small integral membrane protein 17", "gene_name": "SMIM17", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MQSLRPEQVRGLLEPERAKTLLPRENKAWEKRAAFAKDWVAVEVGASGCGSDEKDLPSPKTLVPQEWSSVEEDDESEDSQPHWAAALPTSPSCPSQDTGTGSGADLCLQCSSPRTPPWLPWAFSHTIESALPTPPRAWLWSLL", "length": 143 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "A0AAA9RY85-1", "protein_name": "Core Histone H2A/H2B/H3 domain-containing protein", "gene_name": "", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MNMPEPAKSAPAPKKGSKKAVTKAQKKDSKKRKRSRKESYSVYVYKVLKQVHPDTGISSKALGIMNSFLNDIFERITGKTSRLVHYNKRSTITSREIQTTVRLLLPGELAKHAESEGTKAVTSIPALSKYNMPSRC", "length": 136 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "A0ABK0KVZ2-1", "protein_name": "Eukaryotic translation initiation factor 1", "gene_name": "Eif1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "EFGFRSVASAGWGAACPLGLRHVISCGGRAGLEQKARALSSSSTGLFPEGQQRAPPDFSDDICTDKKKNQERGINKWPTTTRNKNYFFVDPFADASKGDDLLPAGTEDYIHIRIQQRNGRKTLTTVQGIADDYDKKKLVKAFKKKFACNGTVIEHPEYGEVIQLQGDQRKNICQFLIEIGLAKDDQLKVHGF", "length": 192 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0ABK0L002-1", "protein_name": "Oocyte specific homeobox 2 like 1", "gene_name": "Obox2l1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "ILQSVQNTDMIEGPSFLPKFQMSSYTPMDTSSQLPQEPSWNLAFQMGQSPLVTSRTPMQSSPSVPEQNLNWQESQGSSRESSIQMQPGPVMDPGFPTLRSPSGHPSHQRPSRPSSRSGFHVPIEPMALSDKHGGKQTGPVAPRKCRKERTQYSAKQKSVLQEHFAECQYPDKKLCLELATLFGVTENEIKVWFKNNRAKCKQKNVPEALPETNGGPEAVSWSTDFPGSIAVVGCDQGEPMATAILDVDSTPKLNCSQESSLDGNWTYDGAMCCLPEDVLDGNDPVTAGDSGESAPVEAQSDLAAAGAPVAMAVDTQNPEECEDLPLLDEGVWQWMLEDFHQLEDWFTKNYIESPSSASHPLD", "length": 362 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0ABK0LHI6-1", "protein_name": "CD27 antigen", "gene_name": "Cd27", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAWPPLYWLCMLGTLVGLLATPAPNNCPDRHYWIGAGLCCQMCGPGTFLVKHCDQDRAAAQCDPCIPGTSFSPDYHTRPHCESCRHCNSGFLIRNCTVTANAECTCSKGWQCRDQECTECDPPLNPALTSQPSEAPSPQLPPPTHLPYATEKPSWPPQRQLPDSTVYSRLPSQRPLCSSDCIRIFVTFSSMLLVFVLGGILFFHQRRNHGPNEDSQAVPEELCPYSCPREEEGSVIPIQEDYRKPEPASYP", "length": 251 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0ABK0LYA6-1", "protein_name": "Prostate and testis expressed 2", "gene_name": "Pate2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MLSCLTSELQGSACLCLPSTGSYKHILQHLDLGTMCYKCKKYHLGLCYGLMRSCTLKHRQSCAAENFYILTNRGQSMYHYSRLSCMTNCEDINFLSFERRTELICCKHSSYCNLPMGL", "length": 118 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0ABK0M6C3-1", "protein_name": "Prohibitin", "gene_name": "AABR07037878.1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MYNKNIKNSISISVCVGGVGGVRARAHAHAHTSPHACTRVIHAFVMLEVGPRDFVHIKKAFRGIDVKKPVIFDCRSQPRNVPVVTGSKDLQNVNITLRILFRPVTSQLPRIYTSIGLDYAERVLPSITSEILKSVVARFNAEELITQRELVSKQVSDDLTERAATFGLILDDVSLTHLTFGKEFTEAVEAKQVAQQEAETARFVVEKAEHQKAAAIISAEGDAKAAELIANSLATAGDGLIELRKLEAAEDIAYQLSSSQNITYLPVGPSSVGPSVRQSMFLRLPQ", "length": 286 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0AC58FXL6-1", "protein_name": "Cytochrome P450 2X10.2 isoform X2", "gene_name": "cyp2x10.2", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MSDLRGIYSYMLSTVNSLVRDSSLTNFKKEFCVHAYLLSVCIQYQSSVWSSSRSVTMLTALVLLCLGAFLLYLQLRIRRPKNFPPGPAPVPIFGNLLQLNRISPLKDFDKFAQHYGSIYGIYIGSQPAVVLTGQKMIKEALITQAAEFSGRSNNMMFSHVTGGKGVIMADYGESWREHRRFALTTLRNFGLGKKSMEQRILEEVKHICLLLEESAGKSIDPQHLYHQAASNIIASVIFGSRFNYKDAYFQTLITSVEDLTKITIGPWAMLYEIAPVLRIFPLPFQKAFQYFEQITKHVLKVVEEHKTSRVAGEPRDLIDCYLEEMENKSDHRTSFDESQMVTLLFDLFIAGTETTSNTLRTLTLYLMTYTHIQEQCQREIDEVLGARDHVTYEDRNAMHFVQAVIHEGQRVADIAPLSMFHSAKTDTQLRGYSIPKGTIIIPYLSSSLREEGQWKFPHEFNPQNFLNEKGEFVKNDAFMPFSAGPRVCLGENLARMELFLILVTVLRRFRLVWPKDAGEPDFTYIYGGTQSVKPYRVIVEPRMHGEACKFVD", "length": 552 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0AC58J797-1", "protein_name": "Uncharacterized protein isoform X1", "gene_name": "si:dkey-233e3.2", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MANAKQLLKNSLDELVEAELKEFQWYLINDHRDISKAEMEKADRLKTVDKMVSCFGPKGAVKTTVDILRKINQNELAEELENKHKQGNCMSARAEGAVLETCKSPPFDYTNTSRELKKKLKEDYEKILVGNSQTGHKKYLEDIYTDLYVVENETGGRERQHEVIQMESKHNQQDRPLKCNDMFKVQPDTGRKHRRILTLGIAGVGKTVSVNKFILDWAEGKDNQEIVFIFPLPFRRLNLIKEEKYSLIGLLNKYFFSISGGLSSLPEKQGKVMFIFDGLDEYRFKLNFKKDDGFTDVNKEMTVSEIITNLLKRHLVPSSLMWITSRPAASSLIPRDLIDQVTEVRGFIDEQKEHYFIKNSSPEVARNIIGHIKKSRSLYIMCHIPVFCLISLTVLQPLLGQESNEKTPTTLTGMYINFLLSQKQQMKEKYRNDTESEANACSFDEIVLKLGKLAFKQLQKGQLIFYKTDLEKCGLDVRQGSVFSGLCTRMFQEENHYSGEQVYSFVHLSVQEFIAALYVFFTYKNKKANLFLDSWKKELKWKLSEKPLFKLHTAAVKKTLQSKNGHLDLFLRFLMGLSLESNQSDMKELLPWLKLKTGMIKDTTDYIKKKIEEENSAERTINLFHCLNELNDDFVEELQKSLCSGNLTAQDLSSAQWSGLVFVLLMSEETQEKFELQKYRRSDEALMRLIPVVKNTTRALLQCCNLTAQSCESLSSALQSSNCVLRELDLSNNDLQDSGVNLLSNGLKSPKCKLEILRLSGCMVTEEGCGFLSSALTSNPSHLRELDLSYNHPGDSGLKLLSQKLEDPNYTLNKLNLDHGGEKWFTAGLHKYACFLTLAPNTAHIELRLSEENRRVTRVGERQQYPDHPDRFDHHAHVLCRESVCGRCYWEIEMNAGDRVDIAVSYKSIKRKGRGYECVLGQNAQSWALICYVNRVAFRHNMIETRLPVKLMSRRIGVFVDHSAGTLIFHNIYRDSMSLIHSVQTTFTEPLYPGFWVEYGSSVKLC", "length": 1006 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0AC58JHM1-1", "protein_name": "Phoenix isoform X1", "gene_name": "pho", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MDLRSKGDTSVGEVMEADPRAELIFETPPPDVVSSINACFEEIDSALKIRRDPSVHSPPSDSDSESLFITQSVTKVVHTKRRLRSSKKPDSISDDSGYVRERRLSENQQTECEEESRSLRSSRRKRSKWEMYASARKATFPFLMKSLKTQHLPIRKHQILENSEVGGFFKCIKKIKTGSVKMGKVISSHLFQSPISDSSEEEDQNSEHDVISVDKALFVPGYKRGINFKWLPDFIRERRTLENYLSNGVDKEKKTEQIIEYRQRNQHPQRTSAKALSKSSQVSKKPKKQDTHEVLASCSDHEDLEIAECAENSHEGHKVVIEETQRQTVEEASAHLEHEDDLNCKVVEYRKRKRHPKRTSAKALSKSSQVSKKPKKQDTHEVLASCSDHEDIESVECAENSHEDHNVVIEETQRQTVEEASAHLEHEDDLNCKNQPDVDQPNESNFIGPPQEGDISTQSDTQQTDSDIGSVDLFSPLNSPKRDDQIPNTTSITANVEENDQDSDVTQIESEGQHVSTFTQETQKCFANEEYDSDETHIDTESLSRFKPRTPNKQFTSTKHPEIPQFRVQSPKPPSRQAETVNVQLSPKHLPLSNVPLSEVPISPCESAIVGRQKTMVETETDSPMFKITGPSFLKRKRKRTKDKNAAADFKQHDTNGDVGQMVSCPGDDITGLKAVPIENIEACGVEHEMAIGEQTEELGLKSKELLEESVLSTVNSVSTKSKREKMKKYKVKECEAVENQLVETSKKAKKKKKDKERIATSYPEENNLTNIQSNEGFDSAELRVKEVNQSSQSLNTDQPTCVQTSEEITGETELKKKTTRHETDDPLYESVGLDVTLASQFDVGLRIDEQQEGLVTEEAERDERLQGKAMKVAKGKKKIQDTSFQVDHDIGLDKQRSDSGAKPANLDLDGLESLTIKKKKKKKKKHKLKEKTDPKLDFDFDHNVQFFQTDRLQTTDSVLLDSTHTNKQKKKKLKCQNDTDQSSDLKQLHVVGSKLQTIDLPKTDKHMERTGVSSSDALLEHMDDRTLGMRENNTIQTDQIEHLQTSEEVTRCSSPRLSSDKKREKTSVHPNLDASSVFQFDGFKANEDQAITQNTTKEKQISSEQLENNLVGPPSQVENIANVNSSVLLDHTHMNTLREGQLKEQTYKELALAFGLKQLCIVVNKLKTTDLPKTNKNMEGTGVGSSDELLKHTDDRTLETRENNTIQTNQIEHLQTSEKVERHSSPRVTRLSFAKKWMKTSVDSNLDASSGSQFDGLNSMAKEDWTFSQNMDLPLKRTKNKQKDKERTGVSSDALLKRMDDRPPEMRKKNTIQTNQIEYLQTSEKVTRRSSPRLTRLSLAKKMEKTSVDPNLDASSGSQFDGLKEASKEDRTAPRNSIEEKQSDAISSEGLENNPAHLVSTNKSDNTSPSSQVDNIVGLQSDANSVLLDHTHTDKQKKKKIKHKLIEQTEKELTSEVEDNVQPFQFIELRAMDLPSKRITNKKLKDRKRTGVSSSDAVLKHIDDGPSDMRENNSIQTDKIEHLQTSEEMTRCPSPRLSSDKKRKKKYVDTNLDASSGFQFNWSNGMAKEYSKNSTNISSLDNMHTSKQKKKKKQKLKEQKNVESVGDNVYSLEPDQFSGLQITEIKTKKKDKKRTKQANVEENDLKGILSNKAFKASQTYQLEHIQTSEEIKGRSPNAASKSAKKKKKKKNETKNPQYESVNLDLSLAKEDRTTTQNHTEETQGDGNAVEHLEMNPAGLIKVSKKKKKRENAGIVQLDNIIGLQSGSSTDVKSSVLSDSTDTNKHKKKKRKTLKEQENVEAEGDDVQSVEPDPFSGLQITEMTTKKKRKHKRCEEQRCLRGVSSHEAFKAPPTNLLQHIQTSEEISQCQSPNVAALENGGSPYQLENITEMQPGNSIDINSSEILYSTCTHKQKWKKLKQQENVEADANDVHSAELNLFSELKISEPTTKKKKHKKCVEKCALKDISSNEGIKAPQTSQLEHVQTSKEITQCQSPNAATLKSEKKKKQKRDETEVPQYLDASSVSQFDDVTRLKKQAKVDRTTTQNSSEETQNDDISSKQLEMNPAHLIKVSKRKKKREKAGSPYKVDKIVGLQSGNFTDVNFSQLSDSKRTDKQKKKKKIKLKEQENAEADVDDVHSVELDQFSGLQITKPTTKKKRKHKRCVEESGLRDISSNEAYKAPQTNQLEHIQTSEEITPFQAPNVAALKSAKKKKKKRDKTVEPQCLDASSVSQFDDVKTRAKEDQTLTPNSSKETQGDDSAVECLETNPAGLMKVSKKKKKRENAASPYKVDNIVGLESGNSADVSSSVPSDSTDTNKHKKKKRKKLKKQEIVEADLQTSEEIIQCQSPNVATLKSVKKKKDETKEHQRLDVSSVSQFDDVSRLKKRAKEDRTTIQNSSEETQSADISSEQLEINPAHLIKVSKRKKKRENGRSPSQVGNIVGLQSGNFTDISSSVLSDSTRTDKQKSKQKKKLKEQENVEADANDFHSAEPDQFSGLQITEMTTKKKKKHKRCVEESGLRDISSNYAFKAPQTNQLEHVQTSEEITQCQSPNVAALKSEKKKKNKRDKTDKPQYLDESSVSQFDDVKKRAKADRTTTHNSSEETQKDNISSECLELNPAHLMKISKRKRENKSLGLLSENTADLNSSSLLDGTDTDKHKKKKRKKLEGQENVEADVDDVHSAEPDQFSELQIPEMTTKKKKKHKRCVEESGLKDISSNEALKALQTNQLEHIETSEEMTIKTVKKEKKKRDATEEPHYKSVDLDVSPTESTTEAKLNPTKHKKKRKQSFSGSHDAHEAPERKRKKDRN", "length": 2809 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0MGZ5-1", "protein_name": "Heparan-sulfate 6-O-sulfotransferase 1-B", "gene_name": "hs6st1b", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MNDTERNMVERTSKFLLIVVGSVFFMLILYQYVAPGVINFGSPHGYLLGEEDMTIFPTPDPHYVKKYYFPIKDLERKIDFEIKGEDVIVFLHIQKTGGTTFGRHLVQNVRLELPCDCRPGQKKCTCYRPNRKETWLFSRFSTGWSCGLHADWTELTNCVPGVLNKRESKSKKMRKFYYITLLRDPVSRYLSEWRHVQRGATWKTSLHMCDGRTPTPEELPPCYEGTDWSGCTLQQFMDCPYNLANNRQVRMLADLSLVGCYNLSTVPEKRRSQLLLESAKKNLRDMAFYGLTEFQRKTQYLFERTFHLKFIRPFMQYNSTRAAGVDLDNDTIQRIEELNDLDMKLYDYAKDLFQQRYQYKHMLDRREQRLLRGHASFHSPFREDGAGGEGTARLPTEDYMNHIINGW", "length": 407 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A1EC97-1", "protein_name": "Dual specificity phosphatase 14", "gene_name": "Dusp14", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSSRGHSTLPRTLMAPRMISEGDIGGIAQITSSLFLGRASVASNRHLLQARGITCVVNATIEIPNFNWPQFEYVKVPLADIPHAPIRLYFDTVADKIHSVSKKHGATLVHCAAGVSRSATLCIAYLMKFHNLCLLEAYNWVKARRPVIRPNLGFWRQLIDYESQLFGKSSVKMVQTPYGIIPDVYEKESRHLMPYWGI", "length": 198 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A1XQX2-1", "protein_name": "Neurexin-1b", "gene_name": "nrxn1b", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MMILHLGAHLLFIGLIVCKANAGSSLRFTGSDEQWVAFPMWNACCESEMSFSVKTTHLNGLLVYFDDEGFCDFLELHVHVGKLRLCFSIFCAESTCVLSDVAINDNRWHSVSIMRNFRNTTLIVDDEVKWEEVKSKRRDMTVFSHLFLGGIPSELRSVSLQLTSKTVKDHTSFTGWIMDVKVNDSEPAIISSAGVHEDLCGSENTCLNGGVCSVVEDKPTCDCSQTGYQGKDCSEGLAHLMMLDRGMEEYVATFRGSEYFCYDLSLNPIQSSSDEITLSFRTLQRNGLMLHTGKIADYVNLALKNGAVSLVINLGSGAFEALVEPVNGKFNDNEWHDVKVLRNLRQHSGVGYAMVTISVDGILTTTGYTQEEYTMLGSDDFLYVGGSPSTADLPGSPVSNNFMGCLREVVYKNNDAELELSRLAYQGDPKLQIHGVVAFKCESVATLDAITFETPESFLTLPKWNAKKSGSISFDFRTTEPNGLLLFSCGRAKQHNKEAKSPVTLKVDFFAIEMLDGLLYLLLDMGSGTTKTLALNKKVNDGEWYHVDFQRDGKSGTISINSVRTPYLCPGDSELLDLDDPLYLGGVPESSSGTVFPTGAWSALLNYGYVGCVRDLFIDGRSVDVRRAAELQRAAGVKPSCGKEPSGKCVSEPCLNRGVCREGWSRYICDCTGTGFLGHSCERDATILSFDGSKFLKVQFSAAMHTEAEDVSLRFRSLRAYGVLMASTSTHTTDTLRLELEAGRVRLTVNLDCNRINCTTSKGPESLFAGQNLNDDEWHTVRVIRRGKSLKLSVDDLPTVDGEIPGDHTQLEFHNIETGIITGKRQLPTMPSNFIGHLQSLMFNGKPYIDLCKNGDIDYCQTNAPIGFKSIIADPVTFKSCSSYVTLPSLQAYYYMYLFFQFKTTSADGLILYNSGDGNDFIAVELVKGYLHYISDLGNGAHLIKGNSIKPLNDNHWHNVMISRDPNNLHTVRIDTKTTSQTTLGAKNLDLKGDLFVGGVPEQMYKDLPKLVHAKEGFQGCLASVDLNGRLPDLMTEALVCIGQIERGCEGPSSSCEEDSCANQGVCLQQWENFTCDCSMTTYAGPLCADPGSTYVFGRQGGVITYSWPPHDRPSTRVDRLALGFITLMEDATLVRVDSSAGLGDYLKLHIVKGNVVAVFNVGTYDINIEENGKLVNDGNYHIVRLTRSGGNATLQVDDLPVIERFPPGHIDSHRLGTGRLPYRRLVEESLPKNGRQLTIFNSQMTIRIGGWQKQQVSGFQGQMSGFYYNGLKVFSMAADGDPNVRMEGSVRLVGELQSSSTPHGGATVYQSSVTEISSTTSNTITITYSTPADEQQTTDELLVASAECPSDDEDIDPCEPSSGTLCCFVPPAGPTGPAISSFPGPAEVFRESNGTTGMVVGIVAGAALCILILLYAMYKYRNRDEGSYHVDESRNYICNSNGAALKEKNTADDDSGSKSKKNKNKEYYV", "length": 1470 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A2A7I1-1", "protein_name": "Zinc finger protein 978", "gene_name": "Zfp978", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFAPHQESGRRTTKRMSASLENTAQCLLTFKDVFLDFSSEEWECLNFAQRTLYMDVMLENYNNLLFVENHCICGNYEKEKVVEQDTQHIFNEHGHIQEKSFKCNESSNIIHESSESTPHKTNHRDATLQSSNLKRHKTGTTKQVCTYKDCVNCLKGSSIISLNQGTHVEKKEHNRNKNLDEVLVSKHKPIVRQNNSEMNTYTCGEFDKCFTQSDNLQSQQRIYPGKKSYKYSESDKCFTQPSHLSIHHTIHSGEKPYKCSECDKCFTDKCTLRKHQRIHTGEKPYKCNECDKCFTDKGSLRVHQRIHTGEKPYKCSECDKCFTQTSHLSIHRRIH", "length": 335 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2A8N2-1", "protein_name": "PRAME like 25", "gene_name": "Pramel25", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MVICGHCPDQDESLEEVTEECYSPPTLQNLAIQSLLRDEALAISALTDLPQSLFPVIFEEAFTDGHIGILKAMIPEWPFPYLSLGKQINNCNLETLKAILEGLDILLAQKVQTSRCKLRVINWRDHDLNLWAGSHEGEGLSEFTTEKQPIENSPGCEVKKELKVMTEVLRMKGRLDESTTYLLQWAQQRTDSINLFCRKLVIEGLTKASVIEIFKTVHADCIQELILRRICIEELAFLNPYLKLMKRLFTLTLDHIIGTFSFGDSEKLDEEIIFSLISQLPTLHCLQKLYVNDVPFIKGNLKEYLRCLKKPLETLCISNCDLSQSDLDYLPYCLNICELKHLHLSDICLRDLLLEPLGFLLERVGDTLKILELESCCIVDFQFSALLPALSQCSHLREVTFYDNNFSLPFLKQLLHHTALLSQLISECYPAPLECYDDSGVILTHRLESFCPELLDILKAKRQLQSVSFETTQCSKCGGCYIYDQETQCCHFVELLLA", "length": 498 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2A9Q9-1", "protein_name": "MAGE family member B5B", "gene_name": "Mageb5b", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MPRGQKNKHHRNRLKNKKHNQEKVHPQKDESQEKGHHKRDDFQDHKEARDNAAVEEKSSCSSPSVPGETLEKPPASKTSSDAGWLSCVSSPATVCGDELEFDDGTYFHCGGNSLYSEYRTCQENPCKHCLDMYVNLVEQYVLYKFKMKKLIDRNKLIDLIEPKYRYNFSDIFKRAFENIEIVFAASVIEIDSTNHVYDLVSKLKLPNKGRVCPGRGLPKTGLLMTILAMIFMNGTSASEEDIWKFLNYMQVYPGRKHFIYREPRKLITQDFVKLKYLEYKQISLSDPPCYRFQWGPKAYTETTKMKVLEFMAKGSGVEPSTFSVQYTEALREENQKTKIRKWYPILAQKHCPGHSHQHVQKVMKPQ", "length": 366 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2ADW8-1", "protein_name": "Predicted gene 15128", "gene_name": "Gm15128", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MANREDEIRQLRYLEAANSEEEYNEENDIQSESSRGQAFFPGHPRGRGHRRDSRGRNGHFFRQRFSANHPLLHLTRQVNLESLTRRNGNQSEERQLQQERIQLFFRSLHGLSQSHDHHIGRSHGHDSRRSRNRFRRAPVQSERSHVYSGRTNNYTDRPQHDLSNRPHNQLSVRPHPDLSGRPLHDYSGRPHQNHAVRLQHGHSDRYHLTHTERVLPNNSGIAHPGHTERDNQVQRGRAHDNQSGLAHHNHDGRSHHDHSGRAYHGHARRAHNNQSWRSDNNQSWRDLNQSWRGQNNQSQRGHDNQSQRGHDNQSRRGHDNQSQRGHDNQSQRGHNDQSWRAHNIRSRRDRYHTSLRSSSIQSWMLHERERYHGPRGRNGPRDASPPGSEPEIDRSSAIRERTDYLWVQEHRRNETVELNVGLEDGYSSAEESDESFDRLTCRSMLDTLY", "length": 449 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2AGW6-1", "protein_name": "PRAME like 22", "gene_name": "Pramel22", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MHRLLREEALAISSLKDLPNMLFPVLFEEAFIFGYTKILKAMIPEWPFPYLSIAVLIDNCNLESLKAVLEGLDILLAQKVHSSRCKLKEISWRDTNHGLDGIRPGSHEVEGLSEFMEQKHPNCVEKKELKVTTELSVMNGRLNESDTYLLEWTQQRKDSIHLFCRKLVIQSLTKATVIEIFKIVNADCIPELELCSLCLEDLAFLNPYLRQMDNLLELTLDHITDSLSIGDSEMLEERMITLVSQLPTFPCLQKLCINDVYFIYGNLKEFLGCLKKPLVSFCISNCELSQSDLDYLPYCLNIFELKCLYIINIHLQYLCLEPLGFLLESVRHTLGCLALKSCNMGEPHFKSLLPALSQCFHLTDVNFQENELSLLSLKQLLQHTSKLTQLSYEMYPAPHECYDDRGVILSHRIEQFCPEVLDMLRAKRQPKDINFVTTQCSKCGIYYVYDLETQRCRFLK", "length": 460 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2AGW7-1", "protein_name": "PRAME like 23", "gene_name": "Pramel23", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MNVNSPPTLMKLASQRLLREEALAISALKDLPNMLFPVMFEEAFINGHTKILKAMIPLWPFPYFSLGMMIKNLTLDTLKAVLQEIDILISKVVHSSRCKLKEIKWKNTDYGLQGIWPGSHEFDGLSEFMEQKQPDCGVKKELKVITHLKLMEGSLDECATYLLQWAQQRKDSIHLCCRKLKIQGSINATVIEIFKIVHADCIQELELCCLCLEDLDFLNPYLKQINNLIRLKLDEIKGTVSMGESRNIDEEKVITLISQLPTLQHLEKLCINDVSFIEGNLKECLRCLKKTLEILCITNCYLLQSDLDYLPYCLNILELKCLDFSNIPLSHLFLEHLRFLFERVRHTLECPILKSCEMGESQFNSLLPAISQCCQLTEVNFYDNELSLIFLKKFLHHTAKLSQLTYELYPAPLECYDNRDIILSHRLENFCPELLNILRAKKTAQGGHLCYNPML", "length": 455 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2AHC7-1", "protein_name": "SSX member B14", "gene_name": "Ssxb14", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "METVISCEKIPMEVLHKPKNICKAFQDISTYFSGEEWGKLTEWQKSAYMYMKRNYTRMTGVTVNQPVFMSGKEQAKQSLVKGIEVHDSEDECFEESFGVTPRKRMKLTSVTISIHNVEGSLASGENDSNLAETDGIQVNVWSHRLRERKYRVIYSEISDPEEEEDDDY", "length": 168 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2AK42-1", "protein_name": "Pre-mRNA-splicing factor CWC22 homolog", "gene_name": "Cwc22rt5", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKSSVAHMKQSSGHNRRETHSSYCRSSSPEDRYTEQERFPRDRDYSDYSRSDYERSRRGYSYDDSMESRSRDREKRRERERDADHRKRPWKSPSPDRSPARGIRQSSPQEEPTWKKKKDELDPLLTRTGGAYIPPAKLRMMQEQITDKSSLAYQRMSWEALKKSINGLINKVNISNISIIIQELLQENIVRGRGLLSRSVLQAQSASPIFTHVYAALVAIINSKFPQIGELILKRLILNFRKGYRRNDKQLCLTASKFVAHLINQNVAHEVLCLEMLTLLLERPTDDSVEVAIGFLKECGLKLAQVSPRGINAIFERLRNILHESEIDKRVQYMIEVMFAVRKDGFKDHPVILEGLDLVEEDDQFTHMLPLEDDYNPEDVLNVFKMDPNFMENEEKYKAIKKEILDEGDSDSNTDQGAGSSEDEEEEEEEEEEEEEEGEDEEGGQKVTIHDKTEINLVSFRRTIYLAIQSSLDFEECAHKLLKMEFAESQTKELCNMILDCCAQQRTYENFFGLLAGRFCMLEKEYMESFESIFKEQYDTIHRLETNKLRNVAKVFAHLLYTDSLPWSVLECIKLSEETTTSSSRIFVKIFFQELCEYMGLPKLNARLKDETLQPFFEGLLPRDNPRNTRFAINFFTSIGLGGLTDELREHLKNTPKVIVAQKPEAEQKKTALTSSSSESSSASDSSDSDSDSSESSSESSSEASDSSSSSSTQSSTSAKGTRKKRQGKARGEEVDKLARGHQALERRQGGREDQRHQEGRTERARSERHRAQNSRDADWRDSLAKHIDDRSHENSHSRVGNGREQGSHREPEDRHGEPKKKQREKRFFL", "length": 830 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2ANE0-1", "protein_name": "Reproductive homeobox 2F", "gene_name": "Rhox2f", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MERQSINYLLDVGPEEDEENANGVKTLMVLLAGDGRNEGESGRGLPGSGASAAEGYRAGEISAGGPAAQVADLMDDSNQEDLGATACDQEKEKQPEEPVPDSMGDLENVKRVSGPWSTVNPVRVLVPKFRHLWRHSFNVLQLQELESIFQCNHYISTKEANRLARSMGVSEATVQEWFLKRREKYRSYKRL", "length": 191 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2ANE1-1", "protein_name": "Reproductive homeobox 3F", "gene_name": "Rhox3f", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSMKPERSMSNWIHSNVEPAGRNLFQVNGHRSALLPELPQDYHRASRSVNGCETKMDNTQGTKVLPAEEARNEEDGGQVESALGATAARGRGKEALNGESPAAAGTAGLVEEDRNKEDGGTKGGEKNEQEVREQIPEHVEGESDQAEALRQVPRRRLHHRFTQWQLDELERIFRMNYFLSLEARKQLARWMGVNEAIVKRWFQKRREKYRWYKRL", "length": 215 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2ASJ1-1", "protein_name": "PRAME like 14", "gene_name": "Pramel14", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDLEAPPTLLQLAAQCTVRKEVLTISVLQNLPMKLFPPLFKEADILRKAKMIKLLVEYWPYPSLLVGLLIDKTNLETFQAILEGVGTWLKRKYRPRMGKLQVVDLRNGHHDFWDMLAGREGGDQLVETMPEKQEVEGHSRRQRLRVFSDLSFKSSRHEDKQQTHLLQWAKDREGFLHLCCEKLEIGALGVSKVKKVLKLLQPEFIKELELNTVGNLSKLTKLVPCISKMRNLQKLMLVRIFGRHTYTPLEERNVTKILSLFPKLSYLQHLTIDDVYFLRDHMNELFRYLEAPLLSLTITLCQISQSDLESFSQHWNYGQLKHLCLKGVSLSTLNVTPLKFFLESVADTLQTLELEDCRMKDSHLRILLPALTKCTRLTSINFYDNNISRDVLQDLLHRTANMSQLTMELYPAPVEVYNEWSYVQVERFSQLCAELMNTLITVRRPKSVCFGTYSCYDCDTHCIYGNQTTFCECLE", "length": 475 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2ATW2-1", "protein_name": "Olfactory receptor", "gene_name": "Or4x15", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MADIHNVTEFFFLGLSSNQEVQRVCFVIFLFLYMAIVLGNLLMVVIVAVSRNLGSPMYFFLSSLSFVEICYSSTTAPKLIVDLLAEKKSISVWGCMAQLFFMHFFGGIEMFLLMMMAYDRYVAICKPLHYTSIMNRQVCTVLVGMAWMGGFVHSLAQVLLIFRLPFCGPNIIDHYFCDVLPVLKLVCSDTFLIGLLIVVNGGTLTVISFVVLLSSYAVILFHLRTQSAEGRRKALSTCGSHVTVVVIFFAPCVFIYLRPTATLPIDKMVTVFYTVITPLLNPIIYSLRNAEVKKVIKILCTRATKVDKK", "length": 309 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2AWL9-1", "protein_name": "Reproductive homeobox 2C", "gene_name": "Rhox2c", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MERQSVNYKLDVGPEEDEENANGIKTLMVLLAGEGRNEGESGRGLPGSGASAAEGYRAGELSAGGLAAPVADLMDNSNQEDLGATGCDQEKEKQPEEPVPDSMGDLENVKRVSGPWSTVNPVRVLVPKFRHGWQQSFNVLQLQELESIFQCNHYISTKEANRLARSMGVSEATVQEWFLKRREKYRSYKRL", "length": 191 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2AWM0-1", "protein_name": "Reproductive homeobox 3C", "gene_name": "Rhox3c", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSMKPERSISNWIHSNVERAGRNLFQVNGHRSALLPELPQDYHRASRSVYGCETKMDSTQGTKVLPAEEARNEEDGGQVESALGATAARGRGKEALNGESPAAAGTAGLVEEDRNKEDGGTKGGEKNEQEVREQIPEHVEGESDQAEAPRQVPRRRLHHRFTQWQLDELERIFRMNYFLSLEARKQLARWMGVNEAIVKRWFQKRREQYRWYKRL", "length": 215 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2BED8-1", "protein_name": "Predicted gene, 58953", "gene_name": "Samt1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDQLIVDTRSVIYRFINEKDCIYKLSGLLSSLAAFMLEVLIASILSWRLWEFDSNVVQFVSFGLFEAYYPQQFNISGTLTKMLVYTPIDSTWNISTEFMYAQNLVVWAILMKPVVLVFCVMAIKISCTKNPLVEMQIYCYKISALILSVSSMFTFVSVIWNHMVDFYGHTTLDFPSDFPVKKEALTSKHLTVVLPVGLLIATMSLFGVIMFLSEISDLKLKRPVKANDASKMGLLDA", "length": 237 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2BEE3-1", "protein_name": "Spermatogenesis associated multipass transmembrane protein 1d", "gene_name": "Samt1d", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDQLIVDTRSVIYRFINEKDCIYKLSGLLSSLAAFMLEVLIASILSWRLWEFDSNVVQLVSFGLFEAYYPQQFNISGTLTKMLVYTPIDSTWNISTEFMYAQNLVVWAILMKPVVLVFCVMAIKISCTKNPLVEMQIYCYKISALILSVSSMFTFVSVIWNHMVDFYGHTTLDFPSDFPVKKEALTSKHLTVVLPVGLLIATMSLFGVIMFLSEISDLKLKRPVKANDASKMGLLDA", "length": 237 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2BEI6-1", "protein_name": "Myb/SANT DNA binding domain containing 5 family member 10", "gene_name": "Msantd5f7", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MQREDNRVQSVRSDKEANRRRRLRQEGQSSSGPCDSPWTEDEIWILLQEWAMVEYELGDPGNKMHAKAKSLSRRLSNRGLRKSKNSCLDVMVKMKDLHTRLCNERPRAYRLYSTYEWILYEILGHPRSQGGYVPGLWFDGHSKPPASYAPSLCIGGAISPGPSFSPWTDPEIKIFLQEWQVVEREIGHPGQKIKQKSSLVCQRLYHRGLFKDIQSCLDLMWTLKDLHSTLSRERSRTVPLFSPYRDYLERIFDPKCQRGHVPGALYNWSGYHRPSSSPQTPMVMPSPVYQPWDYGMSASSGQLHGNPSLIMSSQDSLVPRWDAWNATYPLPVQHVLLASLSGDNNFQLAWSPRDESSSPQ", "length": 360 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2BEI8-1", "protein_name": "Myb/SANT DNA binding domain containing 5 family member 8", "gene_name": "Msantd5f8", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MQREDNRVQSVRSDKEANRRRRLRQEGQSSSGPCDSPWTEDEIWILLQEWAMVEYELGDPGNKMHAKAKSLSRRLSNRGLRKSKNSCLDVMVKMKDLHTRLCNERPRAYRLYSTYEWILYEILGHPRSQGGYVPGLWFDGHSKPPASYAPSLCIGGAISPGPSFSPWTDPEIKIFLQEWQVVEREIGHPGQKIKQKSSLVCQRLYHRGLFKDIQSCLDLMWTLKDLHSTLSRERSRTVPLFSPYRDYLERIFDPKCQRGHVPGALYNWSGYHRPSSSPQTPMVMPSPVYQPWDYGMSASSGQLHGNPSLIMSSQDSLVPRWDAWNATYPLPVQHVLLASLSGDNNFQLVWSPRDESSSPQ", "length": 360 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2BFR3-1", "protein_name": "Histone H2A", "gene_name": "H2al1j", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAKKMQRRRRQKRTHSQRGEFPLSLVDRFLPEGNHSGRLSSSAPVILDSVLEYLSSNILELAGEVAYTTGRKRIAPEDVGLVVQNNEQLCQLFKPGATSVFDPPEPDDN", "length": 109 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2BFZ7-1", "protein_name": "BTB domain containing 35, family member 9", "gene_name": "Btbd35f11", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGKTWCLHKVFLCQSGYFANILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2BH64-1", "protein_name": "Secretoglobin, family 1B, member 30", "gene_name": "Scgb1b30", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKLTGALLLLGAALLLTSEGDCGLCPVLQKKVHKFFDGTTEEYVEYLKQYNNDPLVLENAANIKKCSDRMLAEEDKTQATNFINKVTGSRSC", "length": 92 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2BHG6-1", "protein_name": "BTB domain containing 35, family member 7", "gene_name": "Btbd35f7", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLSCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGRTWCLHKVFLCQSGYFANILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYRDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSFGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2BI40-1", "protein_name": "X-linked lymphocyte-regulated 4A", "gene_name": "Xlr4a", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MASKIKGRPPKQPKVTPALPSDDSQQLHENNPGNNLALETCGESSSSHGTGGPKPGPSKKTLNERKRKYGVSVNKTVQNIEWNVDHFLKVQHERRQELYKDYSHQFLTLVMMWNIDVDQIKKQAGKLSDILDEQQKLFQQFQSIHMQKIEEFKELCDRHLKNLQAIKCCRRKAIIEEARKLMDYLEKTVTEETVHVNKQEAKDGVQSSLLSLLIS", "length": 215 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2BI45-1", "protein_name": "X-linked lymphocyte-regulated 5A", "gene_name": "Xlr5a", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSNKEQKAMKKSGKHQRVHKTLPSDDFKNSDEVNPADKPAVGTSGMGSHSSGSDMQEAREPVQKKMQDFKGDDGTGLLMEKKKQFEEDVNASFRSLNENLQSILKAQQNSRQELKSLYCERFGSVYHNWLVEMDRTRDQEEYFSFITQQQMKILQTAIEDHETKLKNAKDMCDTFLKKANDLSKRQKTFIGGQHTIVEKEISKVQNRVIMETQDQDISMVETYLQSLIHESSEETI", "length": 236 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2BI50-1", "protein_name": "X-linked lymphocyte-regulated 5B", "gene_name": "Xlr5b", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSNKEQKAMKKSGKHQRVHKTLPSDDFKNSDEVNPADKPAVGTSGMGSHSSGSDMQEAREPVQKKMQDFKGDDGTGLLMEKRKQFEEDVNASFRSLNENLQSILKAQQNSRQELKSLYCERFGSVYHNWLVEMDRTRDQEEYFSFITQQQMKILQTAIEDHETKLKNAKDMCDTFLKKANDLSKRQKTFIGGQQTIVEKEISKVQNRVIMETQDQDIAMVETYLQSLIHESSEETI", "length": 236 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2BI74-1", "protein_name": "SSX member B6", "gene_name": "Ssxb6", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "METVSSCEKIPMEVLYEPKNICKAFQDISTYFSDEEWVKLTQWQKSAYVYMKRNYIRMTDLGVTVNQPVFMRGKEQAKQSLVEGIEIHDSDDECFEGSFGVTPIKRMKLTSVTISIHNVEGSHDSGENDSNLAETGGIQVNVWSHRLRERKYRVIYSEISDPEEEEDDDY", "length": 170 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2BIM8-1", "protein_name": "Major urinary protein 18", "gene_name": "Mup18", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKMLLLLLCLGLTLVCVHAEEASSTGRNFNVEKINGEWHTIILASDKREKIEDNGNFRLFLEQIHVLENSLVLKFHTVRDEECSELSMVADKTEKAGEYSVTYDGFNTFTIPKTDYDNFLMAHLINEKDGETFQLMGLYGREPDLSSDIKERFAQLCEEHGILRENIIDLSNANRCLQARE", "length": 181 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2CEK7-1", "protein_name": "Major urinary protein 14", "gene_name": "Mup14", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKMLLLLCLGLTLVCVHAEEASSTGRNFNVEKINGEWHTIILASDKREKIEDNGNFRLFLEQIRVLENSLVLKFHTVRDEECSELSMVADKTEKAGEYSVTYDGFNTFTIPKTDYDNFLMAHLINEKDGETFQLMGLYGREPDLSSDIKERFAQLCEEHGILRENIIDLSNANRCLQARE", "length": 180 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2CG71-1", "protein_name": "BTB domain containing 35, family member 19", "gene_name": "Btbd35f20", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLQPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGKTWCLHKVFLCQSVYFANILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKMRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTLKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2CG92-1", "protein_name": "BTB domain containing 35, family member 10", "gene_name": "Btbd35f10", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIHALGKTWCLHKVFLCQSGYFANILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2CGC2-1", "protein_name": "BTB domain containing 35, family member 3", "gene_name": "Btbd35f4", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQRMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGKTWCLHKVFLCQSGYFANILKGTWRESHHGVINLIIKNIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 496 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A3KG49-1", "protein_name": "PWWP domain containing 4C", "gene_name": "Pwwp4c", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDSSEYVLCGWKSQLCPARVLSRPRTPAHSKRRGVPFLEVQILPVGEKRRVRSSKVRPLAKSEIISINSLAGKESRGRGSPGQTRASRRALKVALDGLGEGSSFFQGGRAGSRRTSTLAPKVPKEQASSSSSSLGQRLRLRLRQLLPLSLCQRLHLHLRLRLHLHMHLCLQGRNQKGQGLSQRSPGKRVRPDPGPVMMGSQNVPAVPVGEAQAHTAAGLPRSEVEGDVLRGTRVWPSYSKKTPLGKAGGNPGKRKPGTGKRKLRSLSAPASRKGTRSKTEQQAASGPPRHISISPKALKQRVRCAGLEIRAAGAQRKTALAENKDHPGLGTPKPDSKRASAACMPPVLRLRRSLRIASRKKKTHVLCALCGLPEWEPQVHSKVTNTRFKRRGARVQKDAKATNVVSAQEPSTIEQGTLVWFKFQDLPFWPAVVKSVSKIDKMARVLLIEGNMQFERRGIRVPLRKLKHLDCGEKVSLVRRASRLYAQGINWCFSVIDHYREGLSRGSLLGSFMDYYTTQASYPLRRAVQEGDLHIDFPKVSYAELEDWEEETALGGKGPYKKLLPDRMRAAWDRANQKLVDFIVKRKGADQHLLDIVKGRKPSRWLDDLWKSKREVFCIETYLEDDDQLHLVARHLQEVAKEADEALLSLARGDKVRFTMEVLFPEAIIYSIAALDELSYKEAEEKYLRGPPVHYREKELFDKTILKAARKRSAARIRAARDPPVPTP", "length": 728 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A5WVZ0-1", "protein_name": "2.7.1.138", "gene_name": "cerk", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MEKQSTLLCSELSVQRRLYEVTLNCAILAWKDVQNAKKHTGRAIYGAVKAGSHCVPVCEIIAVQEKEDDSPCKDTGKWQKVPQSPTDSCQHAFTVYYVERTRQHCWRCSNVTFQYSEHSLCLLWIQTIKEQLALLSAQSTEELAGVHQPLRRKTTRQADLRPQSGPHLFPGFHFHRRDWPHSFSAHPSELRFYIIADGKEPVMKCTGDCFSPRVQLHHLMQLIDGLHQASRKMQFNCQMNIMMFLPPLYHQPGNNGFSLFVSIVTEHANHARDHLKAEADLKKYDGVVCVGGDGMFSEIMHGLVSRTQQDAGVDENSTEETLIPCGLRIGIIPAGSTDCICYATVGSNDPVTSALHMVVGDSQPMDVCSVHSDDRFLRYSVSLLGYGFYGDVLKDSERKRWMGPARYNISGVKTFLSHRYYEGTVSFLPAEENLGTPRDKVQCRSGCSICRRSSSDKLLSKEDEASVSDVDCRDTWTVIRGKFLAINAANMSCACPRSPKGLSPSAHLADGTTDLILVRKCSRVDFLRHLLRHTNKKDQFDHSFVEVYRVKQFRFTPRFQECGSEMDLRESRAGGKHFFCQICRENRACGCMSSQSNWNCDGEILPHTAIQVRVHCQLIKLFARGIEEQPVFEDLYAHCQLNNPPNHEP", "length": 649 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A5WWD5-1", "protein_name": "alpha-1,2-Mannosidase", "gene_name": "man1b1b", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MLPSTRKDFVSLTLSESGSYSNSKQWRRQSCWRKWKQLSRLQRSLILLTLMLLLVCGIATSPTLIGHWRGMNGDDVKNSFVVDLKNEYRSILPEPPSERKDFDRRGAFGLEKLLQGKVNVSGVLGDQNHGLDLKNADKGSEGQKPIISWRGAVIEEEQASDTDTKDTENQGDPASLALAESRLEAVREAFRHAWKGYKDFAWGHDELKPISKSYGEWFGLGLTLIDALDTMWILGLQEEFAEAREWVAKELSFDKNVDVNLFESTIRILGGLLSTYHLTGDNLFLDKAKEIGFRLMPAFSTPSKIPYSDVNIGKGTAHPPRWTSDSTVAEVTSIQLEFRELSRLTGDPKYKLAVMEVMKQVHKLDGKQDGLVPMFINTNNGLFTHQGIYTLGARADSYYEYLLKQWIQGGRIEQELLEDYLQAVEGVKKNLLKKSTPLGLTFVGELSHGHFSPKMDHLVCFLPGTLALGVHYGLPADHMELAKQLIETCYQMYAQMETGLSPEIAHFNMHDGSTQDVDVKIADRHNLLRPETVESLFYLYRLTRDKKYQQWGWEILQNFNKYTRVPTGGYTSINNVRDPSYTSPRDKMESFFLGETLKYFYLLFSEDPTLISLDKYVFNTEAHPLPVWPQAE", "length": 632 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A6NCW0-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase 17-like protein 3", "gene_name": "USP17L3", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MGDDSLYLGGEWQFNHFSKLTSSRPDAAFAEIQRTSLPEKSPLSSETRVDLCDDLAPVARQLAPREKLPLSSRRPAAVGAGLQNMGNTCYENASLQCLTYTLPLANYMLSREHSQTCQRPKCCMLCTMQAHITWALHSPGHVIQPSQALASGFHRGKQEDVHEFLMFTVDAMKKACLPGHKQVDHHSKDTTLIHQIFGGCWRSQIKCLHCHGISDTFDPYLDIALDIQAAQSVKQALEQLVKPEELNGENAYHCGLCLQRAPASNTLTLHTSAKVLILVLKRFSDVAGNKLAKNVQYPECLDMQPYMSQQNTGPLVYVLYAVLVHAGWSCHDGHYFSYVKAQEGQWYKMDDAEVTVCSITSVLSQQAYVLFYIQKSEWERHSESVSRGREPRALGAEDTDRRAKQGELKRDHPCLQAPELDEHLVERATQESTLDHWKFLQEQNKTKPEFNVGKVEGTLPPNALVIHQSKYKCGMKNHHPEQQSSLLNLSSTTRTDQESMNTGTLASLQGRTRRAKGKNKHSKRALLVCQ", "length": 530 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "A6NCW7-1", "protein_name": "Inactive ubiquitin carboxyl-terminal hydrolase 17-like protein 4", "gene_name": "USP17L4", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MGDDSLYLGGEWQFNHFSKLTSSRPDAAFAEIQRTSLPEKSPLSSETRVDLCDDLAPVARQLAPREKLPLSSRRPAAVGAGLQNMGNTCYENASLQCLTYTLPLANYMLSREHSQTCQRPKCCMLCTMQAHITWALHSPGHVIQPSQALAAGFHRGKQEDVHEFLMFTVDAMKKACLPGHKQVDHHSKDTTLIHQIFGGCWRSQIKCLHCHGISDTFDPYLDIALDIQAAQSVKQALEQLVKPEELNGENAYHCGLCLQRAPASNTLTLHTSAKVLILVLKRFSDVAGNKLAKNVQYPECLDMQPYMSQQNTGPLVYVLYAVLVHAGWSCHDGYYFSYVKAQEGQWYKMDDAEVTVCSITSVLSQQAYVLFYIQKSEWERHSESVSRGREPRALGAEDTDRPATQGELKRDHPCLQVPELDEHLVERATEESTLDHWKFPQEQNKMKPEFNVRKVEGTLPPNVLVIHQSKYKCGMKNHHPEQQSSLLNLSSMNSTDQESMNTGTLASLQGRTRRSKGKNKHSKRSLLVCQ", "length": 530 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "A6NDS4-1", "protein_name": "TBC1 domain family member 3B", "gene_name": "TBC1D3B", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MDVVEVAGSWWAQEREDIIMKYEKGHRAGLPEDKGPKPFRSYNNNVDHLGIVHETELPPLTAREAKQIRREISRKSKWVDMLGDWEKYKSSRKLIDRAYKGMPMNIRGPMWSVLLNIEEMKLKNPGRYQIMKEKGKRSSEHIQRIDRDISGTLRKHMFFRDRYGTKQRELLHILLAYEEYNPEVGYCRDLSHIAALFLLYLPEEDAFWALVQLLASERHSLQGFHSPNGGTVQGLQDQQEHVVATSQSKTMGHQDKKDLCGQCSPLGCLIRILIDGISLGLTLRLWDVYLVEGEQALMPITRIAFKVQQKRLTKTSRCGPWARFCNRFVDTWARDEDTVLKHLRASMKKLTRKQGDLPPPAKPEQGSSASRPVPASRGRKTLCKGDRQAPPGPPARFPRPIWSASPPRAPRSSTPCPGGAVREDTYPVGTQGVPSPALAQGGPQGSWRFLQWNSMPRLPTDLDVEGPWFRHYDFRQSCWVRAISQEDQLAPCWQAEHPAERVRSAFAAPSTDSDQGTPFRARDEQQCAPTSGPCLCGLHLESSQFPPGF", "length": 549 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "A6NJZ7-1", "protein_name": "RIMS-binding protein 3C", "gene_name": "RIMBP3C", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MAKDSPSPLGASPKKPGCSSPAAAVLENQRRELEKLRAELEAERAGWRAERRRFAARERQLREEAERERRQLADRLRSKWEAQRSRELRQLQEEMQREREAEIRQLLRWKEAEQRQLQQLLHRERDGVVRQARELQRQLAEELVNRGHCSRPGASEVSAAQCRCRLQEVLAQLRWQTDGEQAARIRYLQAALEVERQLFLKYILAHFRGHPALSGSPDPQAVHSLEEPLPQTSSGSCHAPKPACQLGSLDSLSAEVGVRSRSLGLVSSACSSSPDGLLSTHASSLDCFAPACSRSLDSTRSLPKASKSEERPSSPDTSTPGSRRLSPPPSPLPPPPPPSAHRKLSNPRGGEGSESQPCEVLTPSPPGLGHHELIKLNWLLAKALWVLARRCYTLQEENKQLRRAGCPYQADEKVKRLKVKRAELTGLARRLADRARELQETNLRAVSAPIPGESCAGLELCQVFARQRARDLSEQASAPLAKDKQIEELRQECHLLQARVASGPCSDLHTGRGGPCTQWLNVRDLDRLQRESQREVLRLQRQLMLQQGNGGAWPEAGGQSATCEEVRRQMLALERELDQRRRECQELGTQAAPARRRGEEAETQLQAALLKNAWLAEENGRLQAKTDWVRKVEAENSEVRGHLGRACQERDASGLIAEQLLQQAARGQDRQQQLQRDPQKALCDLHPSWKEIQALQCRPGHPPEQPWETSQMPESQVKGSRRPKFHARPEDYAVSQPNRDIQEKREASLEESPVALGESASVPQVSETVPASQPLSKKTSSQSNSSSEGSMWATVPSSPTLDRDTASEVDDLEPDSVSLALEMGGSAAPAAPKLKIFMAQYNYNPFEGPNDHPEGELPLTAGDYIYIFGDMDEDGFYEGELDDGRRGLVPSNFVEQIPDSYIPGCLPAKSPDLGPSQLPAGQDEALEEDSLLSGKAQGMVDRGLCQMVRVGSKTEVATEILDTKTEACQLGLLQSMGKQGLSRPLLGTKGVLRMAPMQLHLQNVTATSANITWVYSSHRHPHVVYLDDREHALTPAGVSCYTFQGLCPGTHYRVRVEVRLPWDLLQVYWGTMSSTVTFDTLLAGPPYPPLDVLVERHASPGVLVVSWLPVTIDSAGSSNGVQVTGYAVYADGLKVCEVADATAGSTVLEFSQLQVPLTWQKVSVRTMSLCGESLDSVPAQIPEDFFMCHRWPETPPFSYTCGDPSTYRVTFPVCPQKLSLAPPSAKASPHNPGSCGEPQAKFLEAFFEEPPRRQSPVSNLGSEGECPSSGAGSQAQELAEAWEGCRKDLLFQKSPQNHRPPSVSDQPGEKENCYQHMGTSKSPAPGFIHLRTECGPRKEPCQEKAALERVLRQKQDAQGFTPPQLGASQQYASDFHNVLKEEQEALCLDLRGTERREERREPEPHSRQGQALGVKRGCQLHEPSSALCPAPSAKVIKMPRGGPQQLGTGANTPARVFVALSDYNPLVMSANLKAAEEELVFQKRQLLRVWGSQDTHDFYLSECNRQVGNIPGRLVAEMEVGTEQTDRRWRSPAQGHLPSVAHLEDFQGLIIPQGSSLVLQGNSKRLPLWTPKIMIAALDYDPGDGQMGGQGKGRLALRAGDVVMVYGPMDDQGFYYGELGGHRGLVPAHLLDHMSLHGH", "length": 1639 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "A7TZG3-1", "protein_name": "Selection and upkeep of intraepithelial T-cells protein 9", "gene_name": "Skint9", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MESSASCLPGFFMSFLLLQNTVLTQAMRSDIKINIQVPDTEGLLLECTSGSLIPPAEMTWRDSNGNIIPHSTAFNSQDRDGLLYLKSSILLKNRAKGPITCSIYNVTTNQEKKRSIVLPDALFKSENMSLMSNKFSCPSIYLITIIFLNFLRGILVFCCLRRKPVCFRNLMSTVMEALYSKMGVCCLLIWECLLLVLYIAFLPIYVSFRSRAFLLDDTYPLYTNWLWNICIILTVIMVLFPGLILCLLWTLNCYGQVSSLPPTSMELSTKDSEQNSSKSDDSQENYDVNCKILETCESKIFSQHQESCEDDTASTLFIS", "length": 319 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A7XV14-1", "protein_name": "Selection and upkeep of intraepithelial T-cells protein 11", "gene_name": "Skint11", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEPSASCLPGFFMVCILLKITVLTQVMSLDIQINTQIPDTEEGVLVECTAESLFPPAEMTWRDSKGNIIPPSSTFDSQDRAGLLCLKSTILLKNRTEGPITCSIYNKTTNQEKRRSIILSDVLFRPQYMSLMSNNLLYLGIYLIFILFLNFLKGILFCLTKRLVHFRKRMIKIKKVWSNKTRACCPLIWEFLEIVLFIAFLPLYLMFRIRVFTLDEAHILYNNWLWKVCKTLIAMMILFTVLILFLLWTLNRYGKMPCLSSMNIDVSTHDAEQNSSKSAKFQENYDVAGQMILETYEETIFCQHQESCEEYNYDPLLLSSLDALGTCEDEKFSQHQESFEEDEDLQSFSDFKIELYSKLGNLTH", "length": 364 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "B0BMZ6-1", "protein_name": "Cilia- and flagella-associated protein 119", "gene_name": "Cfap119", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MITPRSSQSLEMKVQTELEHSPKLQEEPDRSPSLVDSSVIRIGTDEQNESPAEATSSPVEVAEDPGANLFPPPLPQPRICMWKYLDIHSMHRLEKAATVEEMREVLAELLELGGPEQSLRDAIILDLFSHALIFCRQQGFSLEQTSAACALLQDLHKACVATPLGNVEECYRYFTSVLFCHGVRRPPFSIDLFKEEQLLALADYVVNTYFRHFKLYKYVFTPQVRLDLSLSYMGLQSLHLWPEEKEDEEATVEQAATPQEEEPEAVTEAEQQPSEVCILQTYIKCQLNKELRQLQQLVEERLKESEERLSNRLAALERPYQTPPSKGKSKAK", "length": 332 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "B0G0Z9-1", "protein_name": "Probable polyketide synthase 6", "gene_name": "pks6", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MNNLKNIDLIEKGVAIVGIGFRIPSGNNENSICSPDDLFNNLKNGFDGVSSTSERWSDNYHKLGEISSPNAGLLPLNEWKSFDPLFFGINPSEASLIDPQQRLLLKCTWEALEDASIDPISIRGTNTSVFIGASNIDYQHTNKHQDSVLKNAIAQSTCAISNRISYCFDFNGPSLSIDTACSSSLNAVSQGYHSILNGTSDISIVGGVNLILDVEMTKAYSYLSMLSKTHGKCKAFDESGDGFTRGECVGVVVLKNLQDAIKDGNRIYCVINGSSSNVDGNGNMDKVNFYSPSKQSQFNNINSAFKSTNDKLSINDIQYIEAHGTGTKTGDPIETEAISMAFKNRDKSAPILIGSIKSNIGHCEAGSGVASLIKCCLMFKYQCFLPNIHFKNPNPLIKFNEWNLKVVTSPIPFNKRNNEKPVSMMINNFGVTGSNCCLLISEFKNNNNFKENINLESQSVNDRVLIPFSANSSNSLNQYQSKFKNIINNQFNFIDFTAIQIYSKSNYLYQRSVVIASNSNELFENISNKKQIQTKNSIISNMSFKGKNPITIFVFSGQGSQYPKMALELYNNEVIFKKSIDLIDSKLSKYYGFSVWEKVKTIKDDDLTSIHDPIFAQPALCMISVSLFELYYHWGVNPSFILGHSLGEISASYCSGMIDLDTFCYTVYQRSIAQSKTNGCGRMLSINISDEEFKSMYSQKYPQIEIACYNSPQSIVVAGNESILNEISKELKEKEIFTAMLGSLSSFHTSSQQSTKDSILQLNIESNQPKVPIFSTVTTNLFNESNRFNSQYVYDNIIKPVKFTQTISNIYKHIESNQLDNDIVFIEIAPHPTLSFYIKQMVPSSLNESVSVYSALHKKKNDVEEFQQTISNLYCQNGYNINFKCQFNNKKSNLNIELPLYQWSDELYFAQNQVLEQHRKGGPPIDHLGLSNSYYSPFKNSYKTLIDINYKPFQYLKGHMVKGKYYFPGCGYIDNIIQLYKNQDIFISFIEFKTPLILIEGINQYLQTNIQQTGKSEYRAQFHFKDHKSNEWIQSSNSNFQLLDHGNDIPSNYNIKEIIKNKCNLSKLTKNELYKNIKSKTGLNYTGVFQGVTECYIGDNCTLSVVSLESQTNSFLNIPILDTCLHGMLILINDQCQIVFDKAIGFKYYSSNIPADFKENKDSFYVYSNLRPRVGGDSYHGTIIVMLSDGSVLYEIEEVVCKSLIPIKDSLKIEYPNDELYKVHLQSKDSPIPTPSSFKSIIYENDFFQSSLNIPEDLFKYISTLFYKDIIKRCPEININKINSHSVNEIISSFSKISKHERLFRFVFETIKENGILNSFEEKDDTYFEFNKVIIKSSRIISKLLFPLENDNDNEDLPQSLFQNGLMDKIYKCSYLRKKNQVISHVIKHSIKEIINNNIIIRILEFGGGTASLSVEVIEEIVTLLQENPNYQVEIEYTWSDISPAFIADAKNKINKIINDAAITNGLNVIYHPLTIGESLIETQSIKPSYYDFVIMSNVLHVVKDIKQAVEQMYQLLTTNGQLVFLEPPYKSVLNDSIVGSFEQWWSFTDTDIRKDRCGMPQQSWYQLLNSCNFKDIVMSKECIFFGSVIQAQKPPISLLNSQPKYDNIIIYGGSINSSFVENIKLDSNSKSLFQIETIQEFNKLISKSTITNDSIVYFIKTLETLSLDNFKQITLEYIEINQKLLQINSLCKHVLIVSDSRKTNYLASSAIGAARYFDEFPLLKLHTLDFDYDSTQNYINSKNNKMVQFINILTDSKTNVHKEMIIINNKVYYEIVQKEKNLKLKYNSESFENQNNLMCSLSPNLEYQLQSKQIKLRDNQVEVKTIATGINYKDYLNFSGSNSNGDDNTGLPQFGYEFSGIITRVGNNVKDYKVGDNVFGLSNSCTSSHIVTNFKKIQIKPSKISHIEASSIPIDYLTSFMSLFNVGSLNIEDNESILIHLGRDGFGLSTFEILKWKGFKSNLFVTVNSDKTKQYLLKKYGDLITGIYSNTDKSYVAEIKNKLIKLGSKKKGVDLILNTLPSDFMDSNFKLLTKYGRIIDLNSNHLNQSEFLKNINFKYNHGYHNFELSLFQKNKILKCLNEISNAIENGELKTIPIKEFTNLNIKDAIKYITNGNIEKITVSHDHEIYSDIIYRYLDEKEFSILKSNYQINSNNLGKNILITGQSGIILEILKWIIKYSNINTIENVIILSRSSLKWELELLINQTKLSNNNIKFHFKSVDVGDSEQVDNAINDILNENQQIRNIDSIFHFAFQQIACKVQEINMKHLNISHGAKSMGAINLHNQSIKRNWKLINFVMASSALSFIDSTDQCTYACANTLLDSFSKYRVSLGLPSTCINLGLIESTGFVSKNESISVFLDGNGIIPTPINRVLGLLDLQIQNASKFTNSMISNFKPSKFKNNQQISLFLKFDYLMNLKNNSEQTKKENTGNKNIDELFIEKVSELFSMDESKINKNLRLIDYGADSLIIVQLKNWIDKEIGINLITIQQLQNNTINISIKMILNSLMKNNQNKYLPSNRIDYWKNEMKFEESIKPIPNEIRSRNNNSGKIILLTGTTGFLGGFLLFNMLRLDSCKLIYCLIRNKSKSSYPLDEIINNLKYHQLYEKLNKSQISKIIPIIGDLSMNKLGLSNDDYETISKNVNLIINPGADINQKSSYQDCKLVNVNGVKEIIKLSLSSLKQRIPIVNFSSFSVFFNQSLDKNFDESVLPSIDNIDNLPTEYMKSKVVGEYILLEASKNYNIPSILIRPPSIFLNPETGIGHSSDLTLLMIQSCYELGYCPNQILNGFILINTITWLSNNITNIIMNDNCWTNSKMNIYNVHGKQIQSSLIIKPLEKHFNCKQINNNDWIDMVNNSNKKSCIKLKSFHSLENIFKSENKGYKSNESQSISLSTKSLLESMGSYNTDLKITDKMIISHIKHIFK", "length": 2924 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "B0G100-1", "protein_name": "Probable polyketide synthase 7", "gene_name": "pks7", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MNNFKNINLIEKGVAIVGIGFRIPSGNNENSISSPDDLFNNLKNGFDGVSSTSERWSDNFHKLGEISSPNAGLLPFNECKSFDPLFFGINPSEAPLIDPQQRLLLKCTWEALEDASIDPISIRGTNTSVFIGSSNIDYLHTNKHQDSVLKNVIAQSTCAISNRISYCFDFNGPSLSIDTACSSSLNAISQGYHSILNGTSDISIVGGVNLILDVETTKAYSYLSMLSKTHGKCKAFDESGDGFTRGECAGVVVLKNLQDAVKDGNRIYCVINGSSSNVDGNGNMDKVNFYSPSKQSQFNNINSAFKSTNEKLSVNEIQYIEAHGTGTKTGDPIETEAISMAFKNRDKSTPILIGSIKSNIGHCEAGSGVASLIKCCLMFKYQCFLPNIHFKNPNPLIKFNEWNLKVVTSPIPFNRKNEKPVSMMINNFGVTGSNCCLLISEFKKQDYEPYENNYKSNNKNILIPFSANSSNSLNQYQSKFKNIINNQFNFIDFTANQIYSKSNYLCQRSVIAASNSNELFEKILNKKQIQTKNSIISNMSFKGKNPITIFVFSGQGSQYPKMALELYNNEVIFKKSIDLINSKLSKYYGYSVLEKLRSIGDDDTTSIHDPNISQPAVCMISVSLFELYCHWGVNPSFILGHSLGEISASYCSGMIDLDTFCYTVYHRSIAQTKTHGNGRMLSINISDEEFKSMYSQKYPQIEIACYNSPQSIVVAGNESILNEISKELKEKEIFTAMLGSLSSFHTSSQQCTKDSVLKLNIQSNQPKVPIFSTVTTNLFNESNRFNSQYVYDNIINPVRFTQTISNIYKHIESNQLNNDIVFIEIAPHPTLSFYIKQMVPSSLNESVSVYSALHKKKNDVEEFQQTISNLYCQNGYNINFKCQFNNKKSNKKIDLPLYQWSDETYFAQTQTLEQHREEGPPIDHLGISNSFISPFNNSYKTLIDINNKPFQYLKGHMVKGKYYFPGCGYIDNIIQLYKNQDIFISFIEFKTPLILIEGINQCLQTNIQQTGKSEYRAQFHFKDQKSNQWTQSSNSNFQLLDHGNDIPSNYNIEEIIKNKCNLSKLTKNELYTHIKSKTGLNYTGVFKGVTECYIGDNCSLSVVSLESQTNSFLNIPILDTCLHGMLVLINDQCQIVFDKTIGFKYYSSNIPAYFKENKDCFYVYSHLKSKSADSYHGSIIVMLSDGSVLYEIQEVVCKSLIPIKDSLKIEYPNDELYKVHLQSKDSQIPTPSYFKSIIYENDSFHSIVNIPEDLFKYISTLFYKDIIKRCPEININKINSHSVNEIISSFSKISKHERLFRFVFETIKENGILNSLEENDDAYFEFNELVIKSSRIISKLLFPLENDNDNEDLPQSLFQNGLMDKFYKCNNFKKKNQIISHVIKHSIKEIINNNIIIRILEFGGGTASLSVEVIGEIVTLLQENPNYQVEIEYTWSDISPAFIADAKNKINKIINDAAITNGLNVIYLPLTIGESLIETQSIKPSYYDFVIMSNVLHVVKDIKQVVEQMYQLLTPNGQLVFVEPPYKSILIDSIVGSFDQWWSFTDTDIRKDRCGMSQQSWYQLLKTCNFKDIVMSKECIFGSVIQAQKPPISLLNSQPKHDNIIIYGGGNNSRFFENIKLYSNSKSLIQIETIQEFNQFINKSTITNDSIIYFIKTLETLSLDNFAQITLEYIEINKKLLQINSLCKHVLIVSDSRKTNYLASSVVGAARYFDEFQQLKLHTLDFDYDSTQNYINSKNNKMVQFINILTDSKTNVHKEMIIINNKVYYEIVQKEKNLKLKYNSESFENQNNLMCSLSPNLEYQLQSKQIKLRDNQVEVKTIATGINYKDYLNFSGSNSNGDDNTGLPQFGYEFSGIITRVGNNVKDYKVGDNVFGLSNSCTSSHIVTNFKNIQLKPSKISHIEASSIPIDYLASFISLFNVGSLNIEDNESILIHLGSDGFGLSTFEILKWKGFKSNLFVTVNSDETKQYLLDRYGDFISGIYSNTDKSYVTEIKNELIKLGSKKKGVDLILNTLPSDFMDSNFELLTKNARIIDLTSNHLNQSEFLKNINFKYNHSYHNFQLSLFQKNKIQKCLNEISNAIENGELKTIPIKEFTNLNIKDAIKYITNGNIEKITVSHDHEIYSDIIYRYLDEKEFSILKSNYQINSNNLGKNILITGQSGIILEILKWIIKYSNINTIENVIILSRSSLKWELELLINQTKLSNNNIKFHFKSIDVGDSEQVDNAINEILNENQQITNIDSIYHFAFQQITCKVQEINMKHLDISHGAKSMGAINLHNQSIKRNWKLINFVMASSAISLIGSTDLCTYACANTLLDSFSKYRVSLGLPSACINFGSIESTGFVSKNESVSVFLDGGGFHPTPINQVLGLLDLQIQNSGKFTNSMLSNFKPSKFKNNQQISLFLKFDYLMNLKNNSEQTKKENIGNKNIDELFIEKVSELFSTDESKINKNLRLIDYGADSLIIVQLKNWIDKEIGINLITIQQLQNNTINISIKMILNSLMKNNQCGREI", "length": 2513 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "B0G101-1", "protein_name": "Probable polyketide synthase 8/35", "gene_name": "pks8", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MNNLEIINLIDKGVAIVGVGFRIPSGNNENSICSPDDLFNNLKNGFDGVSSTSERWSDNFHKLGEISSPNAGLLPFNECKSFDPLFFGINPSDAHQIDPQQRLLLKCTWEALEDASIDPISIRGTNTSVFIGSSNIDYQHINKHQDSVLKNVIAQSAYAVSNRISYCFDFNGPSLSIDTACSSSLNAVSQGYHSILNGTSNMSIVGGVNLILDVGMIKAYSYLSMLSKTHGKCKAFDESGDGFTRGECATIVVLKNLQDAVKDGNRIYCVINGSSSNVDGGGHMDKVNLYSPSKQSQFNNINSAFKSTNGKLSINDIQYIEAHGTGTKTGDPIETEAISMAFKNRDKSTPILIGSIKSNIGHCEAGSGVASLIKCCLMFKYQCFLPNIHFKNPNPLIKFNEWNLKVVTSPIPFNKRINEKPVSMMINNFGVTGSNCCLLISEFKKQDYESYENNNNNKSNHKNILIPFSANSSNSLNQYQSKFKNIINNQFNFIDFTANQIYSKSNYLYQRSVVIASNSNELFEKILNKKQIQTKNSIISNMSFKGKNPITIFVFSGQGSQYPKMALELYNNDEIFKKSIDLIDSKLSKYYGYSVWGKLTTIKDDDLTSIHDPIFAQPALCMLSVSLFEIYCHWGVNPSFILGHSLGEISAAYCSGMIDLDTFCYTVYYRSIAQSKTNGCGRMLSINISDEEFKSMYSQKYPQIEIACYNSPQSIVVAGNESILNEISKELKEKEIFTAMLGSLSSFHTSSQQCTKDSILQLNIESNQPKVPIFSTVTTNLFNESNRFNSQYVYDNIIKPVKFTQTISNIYKHIESNQLNNDIVFIEIAPHPTISFYIKQMVPSSLNESVSVYSALHKKKNDVEEFQQTISNLYCQNGYSINFKCQLENKKSNQSINLPLYQWDDELYFAQTQTLEQYTKEGPPIDHLGLSNSYYSPFKNSYRTFIDINNKPFQYLKGHMVKGKYYFPGCGYIDIIIQLYKNQDIFISFIEFKTPLILIEGINQYLQTNIQQTGKSEYRAQFHFKDQKSNEWIQSSNANFQLLDHGNDIPSNYNIEEIIKNKCNLSKLTKNELYTQIKSKTGLNYTGVFQGATECYLGNDCSLSVLSLKSQTNSFLNIPILDTCLHGMLVLINDQSQIVFDKAIGFKYYSSNIPSDLKEYKDSIYVYSNLKPKNADSYHGSIIVMLSDGSVLYEIQEVIFKSLIPIKHSLKIEYPNDELYKVHLQSKDSQIPTPSSFKSIIYENDFFHSALNIPEDLFKYISTLFYKDIIKRCPEININKINSHSVNEIISSFSKISKNQRLFRFVFETIKENGILNSLEENDDAYFEFNELVIKSSKIISKLLFPLESDNDNEDLPQSLFQNGLMDKIYKCSYLRKKYQMISHVIIHSIKEIINNNIIIRILEFGGGTASLSVEVIGEIVALLQENPNYQVEIEYTWSDISPAFIADAKNKINKIINDAAITNGLNVIYRSLTIDESLLENQAIKPSYYDFVIMSNVLHVVKNIKQAVEQMYQLLTPNGQLLFIEPPYKSVLIDSIIGSFEQWWSFTDTDIRKDRCGMSQQSWYQLLKTCNFKDILMSKECIFVGSVIHAQKPPISLLNSQPKHDNIIIYGGGGNLSFVENIKLDSNSKSLIQIETIQEFNQLLSQSTITNDSIIYFIKTLETLSLDNYKQITLEYIEINQRLLQINSLCKHVLIVSDSRKTNYLASSVVGAARYFDEFQQLKLHTLDFDYDSTQNYINSKNNKMVQFINILVDSKTNVHKEMIIINNKVYYEIVQKEKNLKLKYNSESFENQNNLMCSLSPNLEYQLQSKQIKLRDNQVEVKTIATGINYKDYLNFSGSNNNNGDDNTGLPQFGYEFSGIITRVGNNVKDYKVGDNVFGLSNSCTSSHIVTNFKNIQLKPSNISHNEASSIPIDYLTSFMSLFNVGSLNIEDNESILIHLGSDSFGLSTFEILKWKGFKSNLFVTVDLDETKQYLLDRYGDFITGIYSNTDKSYVTEIKNELIKLGSKKKGVDLILNTLPSDFMDSNFELLTKSGRIIDLTSNHLNQSEFLKNINFKYNHGYHNFQLSLIQKNKIQKCLYEISHAIENGELKTIPIKEFTNLNIKDAIKYITNGNIEKITVSHDHEIYSDIIYRSLDEKEFSILKSNYQINSNNLGKNILITGQSGIILEILKWIIKYSNINTIENVIILSRSSLKWELELLINQTKLSNNNIKFHFKSVDVGDSEQVDNAINEILNENQQITNIDSIYHFAFQQITCKVQEINMKHLDISHGAKSMGAVNLHNQSIKRNWKLINFVMASSALSLIGSTDQCTYACANLLLDSFSKYRESLGLPSACINLGSIESTGFVSKNESISEFTDGIGYVPTPINLVLGLLDLQIQNAGKFTNSMLSNLISSKFKNIQQTSLFLKFDYLMNLNDNSEQTKKENIGNKNIDELFIEKVSELFSTDQSRINKNLRLIDYGADSLIIVQLKNWIDKEIGINLITIKQLQNNTINISIKMILNSLMKNNQI", "length": 2514 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "B0G110-1", "protein_name": "Acyl-coenzyme A oxidase", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MYKNRIEIIKKHLEVNNSQTTNNKDEVLEKELFNSIDTNINVGELKLLIDSVEESKYKDETREFIRNHPKFKENFIGLDMATYRQLVLEQCAAIANRGLIHFTDIKNNLHRYIGALEMFALYNNNILTKLSVQYTLFGGPIIFLGTSRHEKYIEDANTLKTMGCFAMTEIGHGSNVRGIETTAHYDKQTKEFIIHSPTPTSEKFWIGCAYLHATYAVVFANLIIDGTNYGIHAFIVPLRCPKSGAIMKGITIKDCGHKLGLNGIDNGQIRFDQVRIPRENLLNKYSDVSEDGVYKSQFNTPIKNFAATMSPFIVGRMAITKGCSGAAKTSLSIAIEFSHIRKQFGPSSNKELPLITLSSQQRRLMAPLARTILFDLYIQRLTNELCQEKLPASIHAHCSGIKAVYSWFCVAALQTCREACGGQGYRSANRIAEFKNDCDIICTYEGDNTVLMQQLAKYLLGVKQKQTNTTTNRIYLDGEDAKSLFFNFSNINQLFETREEMRLAELKQIIDNSKESAYFAFNNAIPWAVKLGFAHMTKIVFQNSINTLKLKNVKPLTHLIMLDALVSIEEDLGWFVSNHLISPNVAQSIPFLIQDLCFEVTKVSKQIIASFDIPENCKPSSKDLISDLF", "length": 629 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "B0G138-1", "protein_name": "Probable polyketide synthase 21", "gene_name": "pks21", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKLENKEIAIVGIGFRIPQGKESINNGSVSHLWNNLKNGFSGIVETSERWSDNINLLGEVNNKFGGLLPLKEWSDFDPVHFAINPSEVPLMDPQTRLLLKCTWEALEDAFIDPIDIRGSNTSCFIGCSTLDYSTTNRDFNETSENYFASNVLHTISNRLSFSYDIRGPSMTIDTACSSSLNSIAMGFQSIQNGTSNLSIVGGVSLLLDPYISKSFSFLNMLSKKGKCKPFDSEADGYIRAESCGIVILKPLSDAIRDGNNIYCVINSFSSNVDGGGLNDKSNFYSPSKQSQSDNIKLALKSANMKASDISFVECHGTGTPTGDPIEVEGVSMALNSSKTSTPSKPLLIGSLKSNIGHSEAASGVASLIKCCLMFKNKHYAPNVNFDQPNPKINFKDWNIKVVTEAIPFTNNNEKPVSMVINNFGVTGSNCCLILSQFIEQSINQNGNGHSYPAESQQQQQQRFLIPFSANSVKSLKNYEDLIINDIKISTNSFKEFVKNQIYSKSKKLYQRSVLISSNWDQLKTKNKYFKTNNDKSSNITIKRNQPLVVIVFGGQGSQWNKMAQQLYECEPIFRSSMDKFNKELSKYYGYSVLDKLRSIKDDDIISIHQPIIAQPSILMLQISLFELYKHWGINVSFIVGHSLGEIATSYCSGMVDFQTVCKLIYHRSISQNNTNGCGKMLSVNISHSEFIELYSNKYPTIEVACYNSPTSIVIAGNENILKEISLNLKENNIFCAFLGSLSSFHTSSQHSTKNEILPLDIPSKQSRIPTFSTVTTNLFNHETTPFNSSYVYENIIQPVRFSQTISNLYQHIENNKLGNELIFIEVSPHPSLSFYLKQMIPKSSSYFNSVSVLTSTNKKNSNDLDEIHSTISQIYCLGYDVNFKCQFNHNDDDVSSIRNSKVNISLPNYQFDEQHYWKVDINFEQYRLNGPNVFNSLGKSMINYSSNNKSYESIIDINRNPFKYLKDHIVKGKYYFPGIGYADNIMKLYPNQDIIINNLEFLAPFVLKENVKHTLQTNVYQLGNTDYRVTFNIKDNKTNQWVQTCTGNFQLISLKDNNNDHSSKYDINQLLSECNFTTLSKQEVYKHSRSITGITHLGAFQGIEELYFGNDCIISKIQVNTENFDIDGKPVYQTYDKSFFNTALLDSCSQTIVGFITNSSQFVFERLEGLKVYSENIPTDKLKYKNIYCQAKFISLESDSYKSSVLVLLEDGTKLLEMDCISLHSTLPLLNSLLINNPTTELFTNNLQCKDSLVNILSIDNNQTFSSISSSNTVTEIIKQTIKPIINEKIVFRILQSFSDLELSKQIIETLNQIFDDNSLQEIDIEFTIIDNSNDKLPTLHDSSLIFKNDITQLKPSYYDIIINNNNDGDDETIIKSIFNILSSNGLLLIIGDDIGDKYNIDSLINLGFNENKIQKSNKVIQSQKSTILSNELTVVPNNKNDNIIIYCEKESKYTNEFMKLISNNHISCKQTIISNINEFNQLLPSITNDSIIYFIKSMEQLEMNNFKQITMEYIEINQQLLKHSLTCKHVLITIDSQIKNYLSSSIIGTARYFNEFPSLNLYSIDFDNQLSISSLLNKIINQLIENSNNHIQREYIIRNNSIYYEILKNEKNIKSNFNSNSFEDNDFMTLLDSTNLEYKLASKPKKLKKNQIEVKVLATGINYKDYLIYRGLVVIDENVSISKNPLGLEFSGIITRISNENQNCEFKVGDNVFGIACDTTASHVIADVLYVSHKPENISHVEAASLPVIFSTCLHGMFNIGNFNIDDDEVILIHSATGGIGLATLEILKWKGHKSPIFVTVGSKDKEQYLIDNYGSFITGIYSSRNKNYVNEIKSKLNQLYGTTGKFNGVDLIINTLPNEFTHSNFLCLKERGKIIDLSITHLNNNEFLNFNNFKFNKSYHNIELMHINKKVVSRLLKSISNALNENKLKPIPITTFQIEDVKEAIEYINQRKHIGKIVLDHSCSNGSIGSDGLLNQLIESDNNEKNHTILKYDFKIDTKNIIGKNIIITGQSGIILEILKWLIKYSPTESFENIIILSKSSLKWELELLINKTISRKDNNTKFHFKSVDVGDPIEMRKSINQILLENPNIDNIDSIFHYAFAQITKEVEEIDIESLDISHNAKTMGAINLHEISIEKSWKLKQFVMASSIASLFGSFNQCSYVSANLVLDSLSRYRKSIGLPSTCTNWGAIKSAGFVSRNELVSKMLDDQGFIPIPTNIILGSLDLQLQNSNKNSNLIVSKFNYDSIKKLSSETSTFQRLDFILNSIKEKDNDSNGGENSVSESIQTKILNKISELLSIEQSKINTDIRLSDYGADSLTSVQLKNFIDKDIKSNVITLQQLQNNTIDMNIQTILEQIKKLDSNETKGKSKNIIKKDSAPTLDYWRNEMKLDESIQAIKMNPIDFRNDSKVFLTGATGFLGVHLLSNLIKSPNCSVVYCLIRNKKSEPNPINAIINNLKHHKLYHFHNEFELSKIKVIVGNLASPLLGLSKLDFDYISNQINLIINSGADINLASNYEESKVVNIGGFIELIKLSTTGDYQKPIVGFSSVSVFFNASNCKEFDEETVIPTIENINNLPGGYMKSKVVVENLLREVAKRGIPSMLIRPPIIFSHEETGIGHDSDFFQLIIQSCYAVKKYPKIDKNILTSPIGWISLNTIKMIGNEKCWNKSSSNQLNIYSLNSEVSAMNPSFSFLEKQYGCEMVEYEQWKNIINQSKILSCVKLKTFHSLDDLYNIYNLGNGFGVSKKTKELLQSMNSYEGGMVNEKMIQNHINYIFKN", "length": 2779 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "B0G149-1", "protein_name": "Transmembrane protein 184F", "gene_name": "tmem184F", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MLSHINIIYIIWILLFFFTCLISFFLVNRHLVNYSSPNVQKNVVRIVMFLPLNSGLSILSSIFPGIAIFNSLVRNCYMAFTAHCFFSMMTNSIGEKNMLDLFESQGKMKFLCCKVMKLNRKLFNTLRFGSIQFFIVKIFCSIATITCISISEEVHSILNVQSFAPYEFLISLVASIFCTISLSIFLAISKEKLSQYWPMTKYRIMIFIFFIEQFEYLFFALIFLRGPFFLGFKNSFDQTIFILHFTVVVTMFLFSIVYLFIYSYKNYRNKASNEPLVGRNFKDSFGLLNYLDVLNPKDLFIDFASIFKTNNNKFKELVEENGDKKPKKNIEDQNQENSNDQPLSIQMA", "length": 348 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "B0G188-1", "protein_name": "GATA zinc finger domain-containing protein 16", "gene_name": "gtaP", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MNSYQIQNQPYQQIQNTHPSFQQVQPMQVPHLQQQQQHQTMIAQQQHTPPQQHTPPQMNMIQQHTQPMLSQPQISLQMQPPSPILASQQQQQHMQSSPILASSNLTNSNNASQTTLPIITSKLLLKKEPIDQEVVNSTHKTTTTNNKPPKQSKRKEKERLEEEKQTVAQQQQYQPPFIPLASNESNSDNPFKGSHAYGVSTTPYGNSQFNNNNNNNNNNNNNNNNSNNNSNNNNGNNNINNNNNNSNNNNNNNSNNNNNNSNNNNGNNNNNNNNNNNNNNNNHNTNNNNSNSNNNNNNGYQQDKKDDYSMMIWSEVGRKINILIRTTSKATKGTPISTQEIAEAIGASNGVTADLVELIKSINDPTYVRKLPPSSISNTPTMGSQSGGMVYNSSPMLSPSTMSPILQHGNYQMGGDMYFGGNNQFSGDKQSALNNVKNSKGGNTNNSGGGSSSGGTNDTQAKKPARRRKMRYGGTELSCHTCGVTNTPEWRRGPNGAKTLCNACGLAWAKSVKSEKQKELLANSTGVNITEPKKAQKRKKESSDNNNNNNNSSDSNKVLKSDDGSNNTNLTNDDDNGYPSSPNSSNSTSPSSHNINNNNNNNNNNNNNNNNNNNNNNNNNNNNIGNNNNNNINNNNTTNSITTPTTTPFPTTIPAMQIVSQLPVMVPQTQQQPHMSGNIISFQALHQNSGYQHYK", "length": 695 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "B0R191-1", "protein_name": "C-X-C motif chemokine 11-6", "gene_name": "cxcl11.6", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MKTLAAFLLLSCLIAGEVNGQDRSSRARCFCVDKGLNMVLLKNLDKVEIFPPSPSCNKHEIVVTLKNGAGQKCLNPDSKFTKNVVLKAIGKRMQQSVPHSTTTGTVKSSMTSSTSAPTAFK", "length": 121 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "B1AV09-1", "protein_name": "Leucine zipper protein 4", "gene_name": "Luzp4", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MANHEDEIRQLRYLEAANSEEEYNEENDIQSESSRGQAFFPGHPRGRGHRRDSRGRNGHFFRQRFSANHPLLHLTRQVNLESLTRRNGNQSEERQLQQERIQLFFRSLHGLSQSHDHHIGRSHGHYSRRSRNRFRRAPVHSERSHVYSGRTNNYTDRPHHDLSDRPHNQLSVRPHPDLSGRPLHDYSGRPHQNHAVRLQHGHSDRYHLTHTERVLPNNSGIDHPGHTERDNQVQRGRAHDNQSGLAHHNHDGRSHHDHSGRAYHGHARRAHNNQSWRSDNNQSWRDLNQSWRGQNNQSQRGHDNQSQRGHDNQSRRGHDNQSQRGHDNQSQRGHNDQSWRAHNIRSRRDRYHTSLRSSSIQSWMLHERERYHGPRGRNGPRDASPPGSEPEIDRSSAIRERTDYLWVQEHRRNETVELNVGLEDGYSSAEESDESLDRLTCRSMLDTLY", "length": 449 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "B1AY40-1", "protein_name": "SSX member B8", "gene_name": "Ssxb8", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "METVSFCEKVPMEVLYEPKNICKAFQDISTYFSDEEWGKLTQWQKSAYVYMKRNYIRMTDLGVTVNQPVFMSGKEQDKQSLVEGIEVHDSEDECFEGSFGVTPIKQMKLTPVTISIHNVEGSLASGENNSNLAETSGIQVNVWSHRLRERKYRVIYEEISDPEEEEDDDY", "length": 170 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "B1AYI3-1", "protein_name": "Predicted gene 13272", "gene_name": "Gm13287", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLPVHLFLVGGVMLSCSPASSLDSGKSGSLHLERSETARFLAELRSVPGHQCLRDRTDFPCPWKEGTNITPMTLGETTSCYSQTLRQVLHLFDTEASRAAWHERALDQLLSSLWRELQVLKRPREQGQSCPLPFALAIRTYFRGFFRYLKAKAHSACSWEIVRVQLQVDLPAFPLSARRGPR", "length": 182 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "B1AZM5-1", "protein_name": "Predicted gene 12886", "gene_name": "Gm12886", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MVLPCSLWLLSVCLLSWCCDAKLPVALDPESESVPKPPVLKTATEIAAIVVFMKTSNETPKSGTYGQSLQDGKNKIKDVEKEVLDACSQLCQSLAQDPNLHHGYILRAYFKEHQFLCCF", "length": 119 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "B1B0R2-1", "protein_name": "Spindlin family, member 2D", "gene_name": "Spin2d", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MESSKLTKKRAGRKRQRSRSPALPKRNIVGCRISHKWKEGDEHITQWNGTVLDQVPVNPSLYLVKYDGIDSVHALELYKDKRVLSLKVISKRVVSSGVTDSSFADAIVGKEVNHLFEGEHGSKEEWRGMVLSQAPILDNSFYITYERDPILYTYQLLDDFKEGDLQIMEGFSDPPSLDIDLELVDGLIGKHVEYTNDDGSKRDGLIIYQIETKPRVYLVKYEDDVHIHVTHLEKEL", "length": 236 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "B4F7F0-1", "protein_name": "Claudin", "gene_name": "Cldn6", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MASTGLQILGIVLTLLGWVNALVSCALPMWKVTAFIGNSIVVAQMVWEGLWMSCVVQSTGQMQCKVYDSLLALPQDLQAARALCVITLLIVLLGLLLYLAGAKCTTCVEDKNSKSRLVLISGVIFVISGVLTLIPICWTAHAIIQDFYNPLVADAQKRELGASLYLGWAASGLLLIGGGLLCCACSSGGTQGPSHYVARYSSPVPHSRGPSEYPSKNYV", "length": 219 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "B7ZW38-1", "protein_name": "Heterogeneous nuclear ribonucleoprotein C-like 3", "gene_name": "HNRNPCL3", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MASNVTNKMDPHSMNSRVFIGNLNTLVVKKSDVEAIFSKYGKIAGCSVHKGFAFVQYDKEKNARAAVAGEDGRMIASQVVDINLAAEPKVNRGNAGVKRSAAEMYGSSFDLDYNLQRDYYGGMYSFPARVPPPPPIALAVVPSKRQRISGNTSRRGKSGFNSKSGKRGSSKSGKLKGDDLQAIKQELTQIKQKVDSLLENLEKIEKEHCKQGVEVKNAKSEEEQTSSSSKKDKTHVKMESEGGADDSVEEGDLLCDDDNEDQGDNQLELIKDDEKGAEEGEDDRDRANGQDDS", "length": 293 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "B8JKF6-1", "protein_name": "BTB domain containing 35, family member 13", "gene_name": "Btbd35f13", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRFLRCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGKTWCLHKVFLCQSGYFANILKGTWRESHHGAINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYVLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "C0HKD1-1", "protein_name": "Spermatogenesis-associated protein 31F1B", "gene_name": "Spata31f1b", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLSTMCFLWDTECPLYVYFCFFIIVLIVWQVRQNYQGLKCENRRSCCRRHQKVRQRAKDAASRARRLSREEDEKPCELLSIMKSQSWVPKQGNVRQLLCLDPSCQICEATTLEIRQLLQSKKSQISPALLGLPQRAACLEMPISSESFEWNQDFYSRYSTNSPVVPGNQTLTQLTEELTESTNADGVLLCWTDPLQIGQEFHLADMPMASETLVSPGLEEPVVLMNEEDTVHSNLNYIQQLQDHEALNSQIPFQTLTPQLTVTHPMAVSIVTDAPQPFLSPEVLRLLEIHVKKLMHFQRWGLPRRVEESLKQFMPNPPVYLPPEHNQPVSFILNTSSQDCVHRFEGISPETWYSYMDGQPIQTFWVSEWSSGDQGQRLSCKPIPSPVEKPLLTPDYELLHDLCLSPEGQVDGSQSNLQKKFTQLFCGLPSMHSESLGSTFLCTQGVSKNTLKPPYKEPHFLKVSPPIPLPEAAPPPSSTSPNESLDEPQRAQIGGVPFLTLSECKTLEWHLLQRQLQLQWGLPAVIARPPRVQSHTQYKHKPWNKAKPRETLKFFGPGKPFSALTRELFFIPQHARRLLEFHLQKRLIHLRWGLPQRIQRSINMLLSSTDLQSLPCGGSRLPNVSISQPGKPEAYGSGDTFLPTAGKGTTPMPHLFAKAQEMLKSHDTKCEQIREGKVPACVQSAWKGRIPGDLAAGTLFPNIPQGQPLELQAENNPDLHQEAVSWKPMDLDQEAQAFSGVFIEHCRRPQALSEETIKKLETTLRHKYLAFLSGLQALYCMAPTKATSPTVDQSVITTMPWSVKSPQKPLSQKSPLEALCLSGLEPCTQDDKETSANIAEEFQHGAQGHGRTEKVPPERQPLLNRPYSLDTEIMERVSFYLKRKALDIKLGISLKESVFQEPTATDLESESVQEPLGSPRESTLLQGPPTLCHVPVAPDPDKVCLKQPATAVQVVFQEQNQPSSRAVPHRSARQGSQVHRNMMEAQVHYVQMGTGGEMLNLGEPFSTESQSPGKSKSGYVPTVAGKRKIPGKPKVVGDLGEGDAGLGFSLVSLKTRQDGEQEKRLLHRQLQGSSLQAQTFHLEGACPHSPQESPELQFADPPPEVFMETDSEQDMEDSQSKESIVPEPARTAKAPQPMLSRASQGLPFPRSPTQRKPSQGQPGPGHVPPGHATPASPYTRPSRLPEAGLKNKMKLFFHSIKLKMKSKAHTEPSTVSTPGKVAKTSKENIDRGLPQAKSPTKKTKPEDFRGPKAQFSVVGPCLTPSYILDSKFWPRPRRVGSVSVLGHSYHCPRHCPRLAYANQQRNPP", "length": 1308 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "C0HKD2-1", "protein_name": "Spermatogenesis-associated protein 31F1C", "gene_name": "Spata31f1c", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLSTMCFLWDTECPLYVYFCFFIIVLIVWQVRQNYQGLKCENRRSCCRRHQKVRQRAKDAASRARRLSREEDEKPCELLSIMKSQSWVPKQGNVRQLLCLDPSCQICEATTLEIRQLLQSKKSQISPALLGLPQRAACLEMPISSESFEWNQDFYSRYSTNSPVVPGNQTLTQLTEELTESTNADGVLLCWTDPLQIGQEFHLADMPMASETLVSPGLEEPVVLMNEEDTVHSNLNYIQQLQDHEALNSQIPFQTLTPQLTVTHPMAVSIVTDAPQPFLSPEVLRLLEIHVKKLMHFQRWGLPRRVEESLKQFMPNPPVYLPPEHNQPVSFILNTSSQDCVHRFEGISPETWYSYMDGQPIQTFWVSEWSSGDQGQRLSCKPIPSPVEKPLLTPDYELLHDLCLSPEGQVDGSQSNLQKKFTQLFCGLPSMHSESLGSTFLCTQGVSKNTLKPPYKEPHFLKVSPPIPLPEAAPPPSSTSPNESLDEPQRAQIGGVPFLTLSECKTLEWHLLQRQLQLQWGLPAVIARPPRVQSHTQYKHKPWNKAKPRETLKFFGPGKPFSALTRELFFIPQHARRLLEFHLQKRLIHLRWGLPQRIQRSINMLLSSTDLQSLPCGGSRLPNVSISQPGKPEAYGSGDTFLPTAGKGTTPMPHLFAKAQEMLKSHDTKCEQIREGKVPACVQSAWKGRIPGDLAAGTLFPNIPQGQPLELQAENNPDLHQEAVSWKPMDLDQEAQAFSGVFIEHCRRPQALSEETIKKLETTLRHKYLAFLSGLQALYCMAPTKATSPTVDQSVITTMPWSVKSPQKPLSQKSPLEALCLSGLEPCTQDDKETSANIAEEFQHGAQGHGRTEKVPPERQPLLNRPYSLDTEIMERVSFYLKRKALDIKLGISLKESVFQEPTATDLESESVQEPLGSPRESTLLQGPPTLCHVPVAPDPDKVCLKQPATAVQVVFQEQNQPSSRAVPHRSARQGSQVHRNMMEAQVHYVQMGTGGEMLNLGEPFSTESQSPGKSKSGYVPTVAGKRKIPGKPKVVGDLGEGDAGLGFSLVSLKTRQDGEQEKRLLHRQLQGSSLQAQTFHLEGACPHSPQESPELQFADPPPEVFMETDSEQDMEDSQSKESIVPEPARTAKAPQPMLSRASQGLPFPRSPTQRKPSQGQPGPGHVPPGHATPASPYTRPSRLPEAGLKNKMKLFFHSIKLKMKSKAHTEPSTVSTPGKVAKTSKENIDRGLPQAKSPTKKTKPEDFRGPKAQFSVVGPCLTPSYILDSKFWPRPRRVGSVSVLGHSYHCPRHCPRLAYANQQRNPP", "length": 1308 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "C0HKD3-1", "protein_name": "Spermatogenesis-associated protein 31F1D", "gene_name": "Spata31f1d", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLSTMCFLWDTECPLYVYFCFFIIVLIVWQVRQNYQGLKCENRRSCCRRHQKVRQRAKDAASRARRLSREEDEKPCELLSIMKSQSWVPKQGNVRQLLCLDPSCQICEATTLEIRQLLQSKKSQISPALLGLPQRAACLEMPISSESFEWNQDFYSRYSTNSPVVPGNQTLTQLTEELTESTNADGVLLCWTDPLQIGQEFHLADMPMASETLVSPGLEEPVVLMNEEDTVHSNLNYIQQLQDHEALNSQIPFQTLTPQLTVTHPMAVSIVTDAPQPFLSPEVLRLLEIHVKKLMHFQRWGLPRRVEESLKQFMPNPPVYLPPEHNQPVSFILNTSSQDCVHRFEGISPETWYSYMDGQPIQTFWVSEWSSGDQGQRLSCKPIPSPVEKPLLTPDYELLHDLCLSPEGQVDGSQSNLQKKFTQLFCGLPSMHSESLGSTFLCTQGVSKNTLKPPYKEPHFLKVSPPIPLPEAAPPPSSTSPNESLDEPQRAQIGGVPFLTLSECKTLEWHLLQRQLQLQWGLPAVIARPPRVQSHTQYKHKPWNKAKPRETLKFFGPGKPFSALTRELFFIPQHARRLLEFHLQKRLIHLRWGLPQRIQRSINMLLSSTDLQSLPCGGSRLPNVSISQPGKPEAYGSGDTFLPTAGKGTTPMPHLFAKAQEMLKSHDTKCEQIREGKVPACVQSAWKGRIPGDLAAGTLFPNIPQGQPLELQAENNPDLHQEAVSWKPMDLDQEAQAFSGVFIEHCRRPQALSEETIKKLETTLRHKYLAFLSGLQALYCMAPTKATSPTVDQSVITTMPWSVKSPQKPLSQKSPLEALCLSGLEPCTQDDKETSANIAEEFQHGAQGHGRTEKVPPERQPLLNRPYSLDTEIMERVSFYLKRKALDIKLGISLKESVFQEPTATDLESESVQEPLGSPRESTLLQGPPTLCHVPVAPDPDKVCLKQPATAVQVVFQEQNQPSSRAVPHRSARQGSQVHRNMMEAQVHYVQMGTGGEMLNLGEPFSTESQSPGKSKSGYVPTVAGKRKIPGKPKVVGDLGEGDAGLGFSLVSLKTRQDGEQEKRLLHRQLQGSSLQAQTFHLEGACPHSPQESPELQFADPPPEVFMETDSEQDMEDSQSKESIVPEPARTAKAPQPMLSRASQGLPFPRSPTQRKPSQGQPGPGHVPPGHATPASPYTRPSRLPEAGLKNKMKLFFHSIKLKMKSKAHTEPSTVSTPGKVAKTSKENIDRGLPQAKSPTKKTKPEDFRGPKAQFSVVGPCLTPSYILDSKFWPRPRRVGSVSVLGHSYHCPRHCPRLAYANQQRNPP", "length": 1308 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "C0HLM6-1", "protein_name": "Small integral membrane protein 20", "gene_name": "Smim20", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAAARNLRTALIFGGFISMVGAAFYPIYFRPLLRLEEYQKEQAVNRAGIVQEDVQPPGLKVWSDPFGRK", "length": 69 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "C7G009-1", "protein_name": "Thioredoxin fold domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MNLILNGNWLVKFGAGWSGHCKKLQPVLENLAQHYNSDNENSKVKVAQVHCEEYESICIKYNIIGYPSLVFFDEGEIKHYRGPRLFENFKEAIDKHLNKEFVAFSQNQPSKIIVITNENLDLLLTGNWLVKFGAAWSLHCKKLQPVLENLAQHYNSDNENSKVKVAQVHCEEDNSICKKYNITGYPSLVFFNEGQIKHYTGPRQFENFKEAIDKHFKYGVKWSGHCKKFQPVLENLAQHYNSDIENSKIKVAQVHCEGDDSICKKYNITGYPSLVFFDEGETKPYRGLREFDKIKEATDKHFK", "length": 303 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "C7G010-1", "protein_name": "Calcineurin-like phosphoesterase domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKLKIKFSIISLFILKLVISKPILKFNNNNQFKIIQFTDLHYGSEPVDDIDTIFSQVNILDYEKPDLVILSGDMVTGYEEQFEDDDRNYWKYWNVFTRPFVERNIPWAITFGNHDGEGALSTNEILKIDQTFNLSLSQSNPVEMHGIANYVLKISSSNSLKSEPASLVYIFDSSTKGCSKLDWGCVHQDQVDWFKNTSKSFNKTDSIAFVHIPPVEIIDLWNNYPVYGNYSETSCCFDNDYGDFVSSLVESGDVHGLYFGHDHENDFHGDYKGVDLGYGRKSGAGSYSSKKPLGARVFQLTESPFTLSTWIREEDGNIVSQVIHPPSEFDRKPLQCKMKDKYSKKELIAIKVIGGFLIFLGIVVVGLIGFFGFKHYKKFKKQTLEMQNLV", "length": 390 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "C7G064-1", "protein_name": "SET domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKKDEKQFQQFPNKGRTVQANTDLPKGSTVFRCAPFASSIEDSDKLATEKYCGFCLQRIPKSDSKECLCKNCKLYSVCKSCRSINESAVEPFQIIIKSTFHLGSDTRDMRLLLRIIANIANGKQGMQTPIDDYQDFMGLTSTLDKVDKEHMTKFKRGVTSISSLISSVRGVGYLKNTITIHEILECFSSVLTNAHQFSYATSKEIGRGVCPTGYFNHSCMPNTTWSLDDQGMLLFSTSSNVKKGDELSLGYLANEYPLKNRRRELLDGYYFFCQCPLCEFQSNLSGYLCEKCKEPLLNDSIVYHEPSLTNPLDTGIGLIKHLRKMIDFRQQSVEFKKMFSSEQLSNILQKGVPKHIQSVFNCDASDNEELQQIVEISERSIKSLPLINGEPIDFYPLSDRNYYEYFKQLKNSKISSPEELQRIKDKILSLINPTIYNSFKDKIDKRLLI", "length": 449 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "C9JPN9-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase 17-like protein 12", "gene_name": "USP17L12", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MEEDSLYLGGEWQFNHFSKLTSSRPDAAFAEIQRTSLPEKSPLSCETRVDLCDDLAPVARQLAPREKLPLSNRRPAAVGAGLQNMGNTCYVNASLQCLTYTPPLANYMLSREHSQTCHRHKGCMLCTMQAHITRALHNPGHVIQPSQALAAGFHRGKQEDAHEFLMFTVDAMKKACLPGHKQVDHHSKDTTLIHQIFGGYWRSQIKCLHCHGISDTFDPYLDIALDIQAAQSVQQALEQLVKPEELNGENAYHCGVCLQRAPASKMLTLLTSAKVLILVLKRFSDVTGNKIAKNVQYPECLDMQPYMSQPNTGPLVYVLYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASSITSVLSQQAYVLFYIQKSEWERHSESVSRGREPRALGAEDTDRRATQGELKRDHPCLQAPELDEHLVERATQESTLDHWKFLQEQNKTKPEFNVRKVEGTLPPDVLVIHQSKYKCGMKNHHPEQQSSLLKLSSTTPTHQESMNTGTLASLRGRARRSKGKNKHSKRALLVCQ", "length": 530 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "D3YTW8-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r258", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSVRGKSLKTTEEVALQIILLCQFGVGTMANVFLFVHNFSPVLTGSKQRPRQVILSHMAVANALTLFLTVFPNNMMAFAPRNPPTELKCKLKFFSHLVTRSTNLCSTCVLSIHQFVILVPISRGKLLLRASVPNLVSYSCYGCWFFSVLSNIHIPIKVTGPQITDNNTDSKSKFFCSTSGFTVRIVFLQFSHDATFMSIMVWTSVSMVLLLHRHRQQMQHILTPNQDARGQAESRATQTILIVVVTFVSFYLLNFICIIFHTFFIHYNLFIRLLGEILAAGFPTISPLLLIFRDPKNPCLELFHCFKPESLQNL", "length": 314 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "D3YTX5-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r259", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSDHGKSVKTTEEVALQLLLLCQFGVGTLANVFLFVHNFSPVLTGSKQRPRQVILSHMAMANALTLFLTIFPNNMIAFAPKTPPTELKCKLEFFSHMVARSTNLCSTCVLSIHQFVTLVLVNRGKLILRASVPNFVSYSCYSCWFFSVLSNIHIPIKVTGPQITDNNTDSKSNLFCSTSGFIVGIVFLQFAYDATFMSIMVWTSVSMILLLHRHRQRMQHILTPNQNPRGQAETRATRTILMLVVTFVSFYLLNFICIIFHTLLMHSHLFIRLVSEVLAAVFPSICPLLLIFRDPKDPCSVLFNC", "length": 305 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "D3YTY1-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r107", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSAHGKSVKTTEEVALQILLLCQFGVGTVANVFLFVHNFSPVLTGSKQRPRQVILSHMAVANALTLFLTIFPNNMSAFAPKTPPNELKCKLDFFSHMVARSKNLCSTCVLSIHQFVTLVPVNRGKGKLILRASVPNLWNYSCYSCWFYSVLSNIHIPIKVTGPQITDNNTDSKSNLFCSTSGFIVGMVFLQFSHDATFMSIMVWTSVSMVLLLHRHRQRMQHILTPNQDARGQAETRATHTILMLVVTFVSFYLLNCICIIFHAFSIHSRLFIRLVSEVLAAVFPSICPLLLIFRDPKDPCSVLFKC", "length": 307 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "D3YTY2-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r138", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSVHDKSVKTTEEVALQLLLLCQFGVGTVANVFLFVHNFSPVLTGYKQRPRQVILSHMAVANALTLFLTIFPNNMMAFAPKTPPNELKCKLESFSRLVARSTNLCSTCVLSIHQFVTLFPLSRGKGKLILRASVQNLASYSCYSCWFFSVLSNIHIPIRVTGPQITDNNTDSKSNLFCSTSGFIVGIVLQFAHDATFMSIMIWTSVSMILLLHRHCQRMQDILTPNQNPRGQAETRATRTILMLVVTFVSFYLLNCICIIFHAFFIHSRLFIRLVSEVLAAVFPSICPLLLIFRDPKDPCSVLFKC", "length": 306 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "D3YXI8-1", "protein_name": "Predicted gene 10377", "gene_name": "Gm10376", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGSQAGSFRKASPQTPNIDENEKRIKRLEKLKRDLQNIKNERDILQGILAKYKDLNDRTNFETFMLEMQNNQMMTDLKRMSQDISEALYKCQHLTKENQLYCCRNCHLLIESNLIQHKVRMLWKENRQLLRKQIALEECNIKTKILCKEGSQKIKDEYSRQAAGKQIIVVPGSKEEAVMSNPCA", "length": 184 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "D3YYI9-1", "protein_name": "Predicted gene 7347", "gene_name": "Gm7347", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MALFARLCRLFQRVNVDGRETREGRKDADLPSERNEGRRRWTWRMCMAHRQTTSPVPVKSKKQFEKEEKELIKKIQLTTKETNELRDRLIYVTEGSMNKRPYHRQTRHYKELKLKEKEIMTFLHDLEMKNMEARENNQELKKEKNFYRNLHTRILLGENLIKKKLAILQQESKEIHADWAIIQQRLVELNLSGKDEQEKTSNLEAQENQVSEAARELGLATAEEDSILQNELPCQEAPAEHHPQHPSSSSDESSSDESSYSTCPEWE", "length": 267 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "D3YYY1-1", "protein_name": "Secretoglobin, family 2B, member 7", "gene_name": "Scgb2b7", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKGTLLLLGLLVTGELSFQTTEACFPFFEAYASVLSGSRVWLYQELQAFDATAEEKVALEKIQDCYSEESIRNILLEPKIMEAMVASPECLSYYGLDNIRSILDYISKLLGE", "length": 112 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "D3Z236-1", "protein_name": "Predicted gene 3676", "gene_name": "Gm3676", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGSQTVSFRKASPQTPNIDENEKRIKRLEKLKRDLQNIKNERDILQGILAKYKDLNDRTNFETFMLEMQHNQMMTDLKRMSQDISEALYKCQHLTKENQLYCCRNCHLLIESNLIQHKVRMLWKENRQLLRKQIALEECNIKTKTLCKEGSQKIKDEYSRQAAGKQIIVVPGSKEEAAMSNPCA", "length": 184 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "D3Z8D1-1", "protein_name": "SIGLEC family like 1", "gene_name": "Siglecl1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MLWGLRSLLLLHLGFLSPVLVDTKKTAVEDGLCSTVPCVIEFSKAPLRKPMIVSYRLNENISFHAGTSQPRGPVADLSTEEVEYCILLTHNMLGRKNMTYSLYVGLGAQKDLTQKQELHIPGSSMAGEPVSLTCTIHSTCQESKALFLSWKGPIMSSSTTVPINPSSALAIDPKPEDQDTTLRCHLKLSLDNLSSSKVVKLQLVSPARLLNYSCLLKRTLTCSCSFHGIPTPSVQWWVGRTPVSVNSIDAILHMTSTTLESWTNSTIHLMWEPEIIKSLRCEGKNQYGVHASGIFLIPDKSSVSSVFLRGLIQGIVYGAIASALFFFFLVVLGMKILNWWEENQTCKNEEAPTLKKPVWGGAKPAEVGS", "length": 369 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3Z8T0-1", "protein_name": "High mobility group nucleosomal binding domain 2, pseudo 3", "gene_name": "AABR07053402.1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MPKRKAERDAQGDEAKAKDEPQRRSARLSAKPAPSKPKKAPAKKREKIPKRKERKADAGKDANNPAENRDAKTGQAQKAEGAGVAK", "length": 86 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3Z9U8-1", "protein_name": "S100 calcium binding protein A7 like 2", "gene_name": "S100a7l2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAQNLTSSEQEVMKLFDLFQNYHVRRTDKLDVQETKRVLREFFPNFMKALNASGIKILNDLEKEITLDEIWDMIGRMAMAYNKKNSNALKD", "length": 91 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZAM9-1", "protein_name": "Olfactory receptor", "gene_name": "Or4f60b", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MKKVNYSVTSEFVFLGFTNSWDIQLLLFLVSSMFYVACIMGNCLIIFTVASDTHLHSPMYFLLANLSFIDVGISSATSPKMISDLLKKHKVISFRGCVIQIFFNQAIGGAEMVLLIAMAFDRYVAICKPLHYLTMMSPQMCLFFLITAWVVGLMHSVIQLIFIVNLPLCGPNILDSFFCDLPQFIKLACMNTYRLELLVSISSGFMSLVSFFLLSISYIVIILTVLKHSSSGAYKALSTLSAHVTVVVLFFGPAIFFYIWPSSTHLDKFLVLFDAVVTPFLNPVIYTLRNKEMKRAMRRVFRHLMGYRQIS", "length": 311 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZC26-1", "protein_name": "Ferritin", "gene_name": "Fthl17fl", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAEASSQVRQNYDRCCEDAINNHIRLLLQASYSYLSMAFYFDRDDVALGNFKRFFLSKSHNCKASAEMFVFMQNKRGGHVFLPSIAKPDRESWHGGLRAMECAFRMEMTINQSLLNMHELAKGKDDAHLCDFLGQHCLDQQVHVLKKMGGYLTNLRQMGAPEQGLAEYLFDKLSLS", "length": 176 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZCM9-1", "protein_name": "Dynein axonemal assembly factor 3", "gene_name": "Dnaaf3", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MTTPAGSGNGFGTVSWWGLSPALDLQAESPPVDPDSQSKTEHKIPELDALLLGSVDGRHMLRTLARAMLWPLRRFNFYVLENNLEAVARHMLIFSLALEEPEKMGLQERSETFLELWGNALLRPSVAAFLRAQASHLSNLVPEPDRLEELLPWLSLRPLKFRERDALEAVFRFWSGGEKGPEVFPMSRLWDSRLRHYLGSRYDARRGVADWDLRMKLHDRGAQVIHFHEFRRWRDTGVAFELRDLSAYHVPNRTMASGRLLSHRGERVAARGYWGDIATGPFVAFGIEADDKSLLRTSNGQPVKTASEITQHNVTELFRDVAAWRGPRAIKGNVEETKSPEPDAPAQEPFTIHFLPLDSSQTLHHKTCYRGRFQLLYVSCGMIHLLSPELGACVAPGGNLVVELARYLVDLRPKELKAFSDRVVEIAQAAGFAPHTGTKPSETFARFYKLGDSTRGGGDSAVESGPVPSKVLAPTPESINPPQADQAPSLEVMSPPKVDQTPPLEAMSPPEADQAPPLEAMSPPRADQIPPLEAMSPLQAEVVLPLEAISPPQADLAPPPEVISPVQEALAMSSAIAPLKHVT", "length": 583 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZCW3-1", "protein_name": "SPATA31 subfamily E, member 1", "gene_name": "Spata31e1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "METFLLLMNSISDFWMSSSSMSTVMDMIFAILCGVGFFFLLIPFLKEYPGSPPPGSKKNISEVVKRRQSKDRKKSVTVDGCRDSQKNSLDIQHDLQTMESPIQHLLLDSSPHPFWNSKEKLNQLSLPQLFSYLKVLEALIQQKFNQLLLGLSSVLSESVVATAWVSREPSSGERKTVRFSDSLGFDQALPLAKGPPQRCLDQPLPHQLVTPSLVGMTEIQEQENLPNSISYQTPSIFQSRARGTAYPTTATGIQVPLPTTNEPCHPGLNWKDIPSCKVQNCQGASSQPTESLARCTLPTKNTRSASIPPEHYLMVHHHEQPQHEEKAINLGEQQRTHARFLPSKEPAQLQGDSPPNSNGYGKNWPELNQPAQPSTLNSKTYKWNQMMGPVPTGMLLKKVIAKYGIPNTIKKDLKLRVKDLLCTSSSTPGESLETKNLTLRTDEHSMNTTENLSFLDPKTTMMKSNIMQLPMKHRQLPCDSKAEPYTKAAFILENLHHQDPGGIRVETASSARLRSPLFEQSPPEVQKTQSSPPPIDSHGHSRSHPDQWQRYQSVQPHALCSQAQPQQSRSIQGTGRSILQPNISVWMSKHERWMRSEDVASGHTSWSSRTVGYRDRVSPSVAKQTNILKIKEESPHVWRANLGSGEITNEQALNNSNEDFEPIEAKRSQGHLQMPTQQNTGYLHLKTEEYSNNDLKVNKQPQAWSVSHHADGSNTVHHAMVKLPSQHSLPSLQNGWQDPKTSQGLGDLLMNRDQSVETQFRVHKDKTEATNDSVFHPSEKRPSNLKYGGISQGERLGRVKSSISSFTQLKDSAKTESKSSPNIGGKREAPSKSSLKFIWNGAQYENLSTKLKGQRDSLKKDIPPPVTEQTQEVVHRINVIYSTAVELQSLMDSLVHKLVKTVGEPSELTRKHMTKVQEYKMESLPFQLGSSSQPSKGLHDPNKSRSVRRMSDDHTSPKEPNNHTFTYRGNRDKMQAGVDVQRVCYQHLDKVKIGFGQHSTPMRNGNPCFHKKAGDKQESSLADQSTGDADQTKPKNEIVGSPHRIPERHNQSSRYREIRDNQEPSVDHKAIDPHQNTKKGMGYSQLMSPKENHPVKISGTAAQGASDPEEIRTKSGKECSPHRSPKMHDHSLRHREVRDKPQPGINTQRAYDQHLNSPKKRMTSENLLTPKGTNHPCWHRVTGDKQQSSLSDQRACDPEQMRRSGMSSYPQRSPKVYHLSCSSEKIGEKLLPLVNDQRTHDKHPNSVKTRGCDNLPTPKGSNHPQGYRVIEDKQQLGLAYRRTCDPGQIKKSGMGKGPCKDTEECNLLYRYKIIGNKQQPGIVHRACDRHQSSKEGMGQGQPMNPKVCHSAKHRRTGGQDQSGVAAQGASNPR", "length": 1373 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZDD6-1", "protein_name": "Synaptonemal complex central element protein 3", "gene_name": "Syce3", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MADSDPGERSYDNMLKMLSDLNKDLERLLEEMEKISVQATWMAYDMVVMRTNPTLAESMRRLEDAFLNCKEEMEKNWQELLTETKRKQ", "length": 88 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZDJ1-1", "protein_name": "Olfactory receptor", "gene_name": "Or13c3f", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MDDMDKNNQTFVSEFLLLGLSGYPKTEILYFVIVLVMYLVILTGNGVLIIASIFDSHLHTPMYFFLGNLSFLDICYTTSSVPSTLVSLISKKRNISFSGCTVQMFVGFAMGSTECLLLGMMAFDRYVAICNPLRYSVIMSKEVYVSMASASWFSGGINSVVQTSLAMRLPFCGNNVINHFTCEVLAVLKLACADISLNIVTMVISNMAFLVLPLLLIFFSYVFILYTILRMNSASGRRKAFSTCSAHLTVVVIFYGTIFSMYAKPKSQDLTGKDKFQTSDKIISLFYGVVTPMLNPIIYSLRNKDVKAAVKYILKQKYIP", "length": 320 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZDT4-1", "protein_name": "Transmembrane protein 92-like", "gene_name": "LOC100364194", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MQEAWVLDALTVIFGLLFSLQGVSSNKTIYKCEDIHCPKGFRCCDNECCLERKIWNTDNEPFRILFIILLVMLPLLCICGLVRRFCPKCRELQHEVRTADHQSPPDPPSIAPLESIWVTSLDPPPPYSQVVQKSTPTEPPPPYSLRPEDSTCPMRETSHETL", "length": 162 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZFJ9-1", "protein_name": "Family with sequence similarity 24 member B", "gene_name": "Fam24b", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MFSSFDLRTIIMIVIGSGILAAMFLLTGVVLCLYSKIARALNPSGTGKELDDQLCSDPCKTTQDQIIRVNSLNADTCRPFHGSTIGLENCQPLQCFSACGTYEGANSLTPCLCNTKEGL", "length": 119 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZFW5-1", "protein_name": "Transmembrane protein 107", "gene_name": "Tmem107", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGRISGLVPSRFLTLLAHLVIVITLFWSRESNIQACLPLKFTPEEYEKQDNQLVAALCLTLGLFAVELAGFLSGVSMFNSTQSLLSIAAHCSASVALSFFIFERWECTTYWYIFAFCSAFPAVTETALFIAVFGLKKKPF", "length": 140 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZG05-1", "protein_name": "40S ribosomal protein S12", "gene_name": "LOC120100003", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAEEGIAAGGVMDINTALQEVPKTALIHDGLARGICEAAKALDKRQGHLCVLASNYDEPMYVKLVAALCAEHQINLIKVDDNKKLGEWVGLCKIDREGKPRKVVGCSCVVVKDYGKESQAKDVIEEYFEYKK", "length": 132 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZGM7-1", "protein_name": "Peptidase inhibitor 16", "gene_name": "Pi16", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MRNCRVSWMPQHSSAAVSGICPPQEGPWSSYSLWPEPPLLREKEAVAKDSRGVDSTLVQTQGTQPSWRHCVSWAGPPDTAPAAPPQPGWCLCGKDFKSSRQTPDRERQRGLATMHSSCSPWVMLPQLPLLLLLLLLLLTATGPATALTEDEKQTMVELHNHYRAQVSPPASDMLQMRWDDELAAFAKAYAQKCVWGHNKERGRRGENLFAITDEGMDVPLAVGNWHEEHEYYNLSTATCDPGQMCGHYTQVVWSKTERIGCGSHFCETLQGVEEANIHLLVCNYEPPGNVKGRKPYQEGTPCSQCPLGYSCVNSLCEPERKPEKAQDSPPRVTEVPGSRETGIPSLATSESLHFSSVTKVSDSLATEPSPAVETKAPPSLATEGPSSMATEAQSFLTEVPSVSATHIQPSLDEGPVNFLTSTHIPVPKSTDKEASSKSRAASVSPEKSLYPKMSPTETGESPPQIQEEAEPKAELPEREDELPEAEVELPEAEAELPEAKAELPVSSEALVPVLPAQERGGPKASLEHSSYPVPTYLPNFPSASGNATGGRTLALQSSRTGAEDPEKASWDSKNSAPVWGPFPGLLLPLLLLAGIF", "length": 596 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZGX2-1", "protein_name": "C-type lectin domain family 2, member M", "gene_name": "Clec2m", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MQTESSLRLSQSSHHRLTFDLKKVVTLWILVIGVIAVLLWGFFSFPKKFTVTRQTKNEVCSDGVKICLHGWNKLNRNCFTHFSHANSWFTAKETCKFHDATLAVFNDQTELDIVMKQMEDIQTFWIGLYKKDFRGPWVWTNGSKYNNWYEVQDYGHCAFLHKSGIDSTNCNDLKEYICTQEGHCP", "length": 185 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZIZ8-1", "protein_name": "Ferritin", "gene_name": "RGD1560203", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAEASSQVRQNYDRCCEEAVNTHIRLLLQASYSYLSMAFYFDRDDVALENFKRFFLSKSHDCKASVEMFVFMQNKRGGHVFLPSIAKPDRKSWQGGFRAMECAFRMEMTINQSLLNLHELAKGKGDAHLCNFLGQHCLDQQVHVLKKIGGYLTNLRQMGAPEQALAEYLFDKLSLS", "length": 176 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZKK4-1", "protein_name": "Zinc finger protein 869", "gene_name": "Zfp869", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MDTPIVGLSSPDQGLVSFEDLVVHFTQDEWDLLEASQKSLYGDVMLETFRNLTAVGYEWEDEAIEDHCEEPEVNLRDIVSHSEYTHEYEHKEYEEKPPDANFLTSVEGCVETKTSSGPSVCEVCLKTFGLYHLTYNGHHNYDYKELRGSQTEENDCEGNSCDKTSGSLQKEDKIHTGKKLYVCQECGKAFRYPSALQLHERIHTGEKPYECKDCGKAFRGLSALHLHERIHTGEKPYECKQCGRAFTYLSALQLHERIHTEERPCECKQCGKTFRYSRALKLHERIHTGEKPYECKQCGKFFRSHRTLKLHKRIHTGEKPYECKECGKAFRWLTSLKLHEKIHTGEKPYECQECGKAFRCQASYHRHKITHGGETLYECKECGKSFIYPSLLQVHERTHTGEKPFECKLCGKAFRCQSSLRLHERTHTGEKPYECKHCGKAFSSYNYLRFHERSHTGEKPYECKECGKTFTHRSYLRSHERRHTGEKPYQCIQCGRSFSRHSSFKRHQSVHGESPYEQYLIPLSPFSSKE", "length": 530 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZKM3-1", "protein_name": "Protein GPR15LG", "gene_name": "Gpr15lg", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MRLLTLSGLFFMLFLCLCVLSSEGRKRPAKFPKLRPCCHLSPRSKPITWKGNHTRPCRPCRKLESNSWVVPGALPQI", "length": 77 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZL22-1", "protein_name": "Olfactory receptor", "gene_name": "Or1x2b", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSKWGENETGVIEFLLLGITNDPQQQRILFWAFLCMYLVTVAGNTLIFLAISSDPHLHTPMYFFLANLSFDDVCFTTNIIPRLLAGHVSGTETISYAYCLTQMYFLISFGNVDTFLLAAMALDRFVAICYPLQYHTIITPRLCVGLASVVWISSGLIALVHTLLMSRLTFCSSIPEISHFYCDAYLLMKLACSDTRINQLVFLGAVVFFVAPCILIVFSYVRIAMAVFQIPSAKGRHKAFSTCSSHLTVVILFYGTVLGIYIRPPDSFSTQDTVATIMFTVVTPMLNPFIYSLRNKDMKETVTRLLHRGSKSS", "length": 313 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZLG9-1", "protein_name": "N-terminal Ras-GEF domain-containing protein", "gene_name": "AABR07047293.1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MFSCCVWTTEGSGLKKDKNEGQGGTWKFMLLSCLQCLWPFAQKEIDLTRDNQAQDHEDQGEHEYAPQVVTEPCRESRISADMVENLVNRLVSSLQGGDPFFIPAFLYGYRQFTTTQHVLDRLLKRFAYFYLGCEEDEQIKSSLCCFLDTWIDQYPEEFSQTILKKLKTYLTVNMPSSDLNLRVHMLLKELRQESNESEGKDDDSVSLPVTLLYKTASAADLSSSVEVGSHTSGDLDIEVWFPSQKVQPEPAYPHETETPQSTIKVISWD", "length": 269 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZMT2-1", "protein_name": "NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 3", "gene_name": "Ndufa3-ps1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAGRSSDFFKNAQAKEPVLVVSFSVWGLAVILPMISPYIKYAGVISKATPYNCPVPVRDNGNVPGVPSQPQERLSPSLERLKNL", "length": 84 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZNA3-1", "protein_name": "60S ribosomal protein L7a", "gene_name": "AABR07049918.1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MPKGKKAKGKKVAPAPAVVKKQETKNVVNPLFEKRSKNFGIGQDIQPKRDLTRFVKWPHYIRLQWQRAILYKQVKVPPAINQFLQALVRQTVTQLLKLAHKYRPETKQEKKQRLLAHAEKKAAGKGDVPTERPPVLRAGVNTVTTLVENKKAQLVVTAHDVDPIELVVFLPALCRKMGVPYCIIRGKARLGRLVHRKTCTTVAFTQVNSKDKGALAKLVEAIRTNYDDRYDEIRCHWGGNVLGPKSVARIAKLEKVKAKEFATKLG", "length": 266 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZNR1-1", "protein_name": "Elongin-B", "gene_name": "Elobl9", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MEVFLMIRRKKTTIFIEAQELTTVLELKRIVQGILKRPPEEQLLFKDDQLLDESKTLRDCGFTSRVAKAQDPATVGLVFREDASEGLQIHPYSTPLLPSVMKTGTDSLE", "length": 109 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZNU6-1", "protein_name": "Olfactory receptor", "gene_name": "Or5p66b", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSWLENGNHTTVAEFLLLGLTDDPVLRVILFTIILCIYLVTVSGNLSTILLIRVSSQLHHPMYFFLSHLASVDIGYSSSVTPNMLVNFLVERNIISYLGCGIQLSLVAFFGAAECFLLAAMAYDRFMAICNPLLYSTKMSTQVCILLVVASYIGGFLNASFAMVSFCSFLFCGPNIINHFFCDFAPLIELSCSDVSVYVIATSFSAGSVTMITALVIAISYSYILITILKMHSTEGRQKAFSTCTSHLTAVTLFYGTVTFIYVMPKSSFSIDQNKIVSVFYLLVIPMLNPLIYSLRNNEIKSALKKQIWRKTVS", "length": 314 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZPU6-1", "protein_name": "Large ribosomal subunit protein eL21", "gene_name": "LOC134485591", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MTNTKGKRRSTRYMFSRPFRKHGVVPLATYMRIYKKGDIVDIKGMGTVQKGMPHKCYHGKTGRVYNVTQHAEGIIVNKQVKGKILTKRINVRIEHIKHSKSRDSFLKRVKENDQKEKEAKEKGTWVPLKRQPAPPREAHFVRTNGKEPERLEPSPYGFMA", "length": 160 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZQ96-1", "protein_name": "Large ribosomal subunit protein eL21", "gene_name": "LOC102550668", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MTNTKVKRRGTRYVFSRPFRKHGVVPLVTYMRLYKKGDIVDIKGMGAAQKGMTHKCYHGKTVRVYNVTQHAVGIIVNKQVKGKILAKRINVWIEHIKHSKSRDSFLKQVKENDQKKEEAKEKGTWVQLSLQPAPPREAHFVRTNGKEPELLEPVP", "length": 155 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZQD9-1", "protein_name": "Developmental pluripotency-associated protein 3-like", "gene_name": "LOC120096627", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MDKSSEKVDPVVNPETQMNDGSQREDEEDSPDDSEILQPETLVKVMKKLTLNPSAKPPKYHRHQRVRLRIKSQPVGNRSERIMREVQSAFPKTRVRTLLSVLKDPIARMRRFVRIEQRQRQLEGNERRDEPFRCLCTFCHYQRWDPSENAKIGQNQKN", "length": 158 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZQT0-1", "protein_name": "Glyceraldehyde-3-phosphate dehydrogenase", "gene_name": "AABR07071101.1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MILCIKPSSTTKYCLNQCYLISCINKPNLLDGVNGIPLDIVAINDPFIDLNYVVYMFQYDSTHGKFNGTVKAENGKLVINGKPTTIFQERDLANIKWGDADAKYVMESTGIFTTMEKAGAHLKGGTKMVIISAPLADAPILKYDNSLKIVSNASYTTNCLAPLTKVIHDNFGIVEGLMTTVHTITATQKIVDGPSGKLWRGGHGAAQNINPETTGVAKAVGKVIPELNGKLTGIAFHVLTPNVSVVDLTCHLKKPAKYDDIKKVVKQASKGPLKGILGYTEDQVVSCDFNSNSHSSTFDARTGIALNDNFVKLISWCDNEYGYSNRVVDLMAYMASKE", "length": 338 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZTK7-1", "protein_name": "Uncharacterized protein", "gene_name": "AABR07012426.1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSGDLEAKISGYTHISVQRFCYKWTISNFSFCMDGIRENITSPVFSLEGNEEVQWCLRIFPNGVDEESKDYLSVSLGLHSCPKSPVLAKVQFWIINAQGEKHQIKEIPNILSFSPKHQWGLRKFILREFLLSRRHGLLPEDQLILCCKVSVVGPSFSTPGHNMTPANKDPRQMLADDVGELWENSLFTDCSLVVAGQEFRAHKAILAARSPVFRAMFEHEMLESLTNRIEIHDIHLQVFKEMMAFIYTGKAPHLHSHSMATELLAAADMYDLQDLKVMCEDSLCRNLSVKTAVPTLMADLHSTELLKTRVMDFIILHASEVSETLEWKSMVESHPHLVEEAFGSLASMHYFFLEPSLKR", "length": 359 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZV50-1", "protein_name": "Small ribosomal subunit protein uS4", "gene_name": "Rps9l1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MLVARSWVCHKTYVTPRRPFEKSRLDQELKLIGEYGLRNKHEVWRVKFTLAKIRKAARELLTLDEKDPRRLFEGNALLRRLVRIVVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLRLAKSIHHAHVLIRQRHIRVRKQVVNIPSFIVCLDSHKHIDFSLRSPYGGGRPGRVKRKNAKKGQGGAGAGDDEKKEK", "length": 195 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZWL0-1", "protein_name": "Ribosomal protein L32 like 1", "gene_name": "Rpl32l1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAALQPLVKLKIVKKRTKKFIRHQSDRYVKIKRNWRKPRGIDNRVRRRFKGQILKPNIGYGSNKKTKHMLPSGFRKFLVHNVKELEVLLMCNKSYCAEIAHNVSSKNRKAIVERAAQLAIRVTNLNARLRSAENE", "length": 135 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D4A176-1", "protein_name": "Golgi associated RAB2 interactor 5A", "gene_name": "Garin5a", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MPRLRTSARSPAPAVRMAISPSGPLGFTSPVTQPRREASPGVPTTQGRGVAMKGGRDLKPASGRADRPLAQAYAPCRPGRLQRHLLSGEFDQLRDFPIFESNFVQVTRFGEVANKVTMGVAASSPALELPDLLLLAGPDKENGHLQLLGLFPLQFVQLFVHDVSRQQLKVKFRTGRAFYLQLRAPPETRDCEFGRWVRLLYRLRFHSPTCAVPFTHEDTVPEESEDEDEVEEGQLQPPEVRAGPRAQGCWARKDGKGPVSCHRGQTRPAGLRTLGALIQPRSFQITKGPEIKPAQLRAREMDF", "length": 303 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D4A9N2-1", "protein_name": "Olfactory receptor", "gene_name": "Or4a77d", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGQNNSVSEFILLGLTEDPAGQKTLFVVFLLIYIGTMVGNLLIVWTVIASPSLDSPMYFFLAYLSLIDALYSSTILPKLLIDLLCDKKTISLTACLVQLFVEHLFGGVEIFLLVFMAYDRYVAICKPLYYLTIMNQRVCVCLVVVSWIGAFAHALVQVFSVYKLPFCGPNIIDHFACDMYPLLGLACTDTYFLGLTVVGNNGAISVVVFMLLLLSYGIILNSLKTHSQEGRRKALSTCSSHIMVIVLFFVPCIFMYVRPVSNFPLDKFITVFYTVFTPMLNPLIYTLRNLEIKKSMEKLCRKIFTSDRIRISSCYS", "length": 316 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D4AAM5-1", "protein_name": "Preferentially expressed antigen in melanoma-like", "gene_name": "Pramel", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MDVKTPNKLLELAIHSLLNEESAAIQALEEIPRELFVPLFIAAFEGGHKNVLSAMVKVWPYYCLHIGSLSIQEPQHELLKAMIENLPVYPAPSSSSRGPKLRILDLRQDTDCRITCPEVSTKTPSCFYSCAYSDRSITKIERQLCCVNAECKTLLPRPVELLVDLSLDGSLMEKEFLVLLMYKIEESLGSLHVCCRDLQIDKLCKCKCTLKFLDLKCIDQLSVDRGSLSDITSILCRMIHLESLSLSNVTFRSLSGKVFKIFLSHLQRMEHLKELSLSSFCLKNHLDRVLRILPPGLDFLYLPFCDLSYRDFKFMSQSPQVTHLKLLNLSNNPMYWGDFEPFHTVLINLSGTLQHLEINHCLISDSAMSALIPALIRCTRLRVLGFASNPISMPMLVNIMHNLTPMKELKYVIYPIPVHCYERWHFQGSLDRQKLAIVQLQLKAMLELAHREDMNWITYCE", "length": 461 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D4AAN9-1", "protein_name": "Similar to human chromosome 6 open reading frame 52", "gene_name": "C17h6orf52", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MVETQSPGKECAVLPLWVLTVTSCPLPSAIREQLRVHHSLRCHRDNHYELLHSFYWLSCYSRGSTLSGNGLGPLCVTENPELLAGPWAIPEETTDPAENQEEDFLRDPNLHLNIEESDKEFMAVREELYDSLMNRRWHCLDTVLSNVPDELPQCEVF", "length": 157 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D4ABB6-1", "protein_name": "Olfactory receptor", "gene_name": "Or13a27c", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "VNCIWHSKMVSPNQTVVTEFVLQGFSEHPSLRLFLTGCFMSLYTIALMGNIVIIALVTSSTGLHSPMYFFLCNLATMDIICTSSVLPKALVGLLSEENTISFKGCMTQLFFLVWSGSSELLLLTVMAYDRYVAICAPLHYSSRMSPQLCGALAMGVWSICAANASMHTGLMARLSFCGPKVITHFFCEIPPLLLLSCSPTYVNSIMTLIADAIYGGINFVLTLLSYGCIIASILRMRSAEGKRKAFSTCSSHLIVVAMYYSSVFFAYISPGSSYNPERSKFTSVLYSVLSPTLNPLIYTLRNKDVKLALGRILASFSH", "length": 318 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D4ADX2-1", "protein_name": "Olfactory receptor family 4 subfamily A member 80", "gene_name": "Or4a80", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGQSKIVTEFVLLGFTQDPAGQKALFVMFSLMYIATMVGNLLIVGTVIVSPSLGSPMYFFLASLSLMDAVYSTAISPKLIVDLLREKKTISFRACISQLFIEHLFGGVDIVILVAMAYDCYVAICKPLHYLIIMNRRVCILFLVMAWAGGFAHALFQVLAVYNLPFCGPNIIDHFGCDIYPLLLLACTDTYLIGLTIIANGGAMCIVIFILLLLSYAIILRSLQNHSQEGRHKALSTCSSHITVFFLFFVPCILMYVRPVSSFPIDKSITVIYTVVTPVLNPLIYTLRNSEMKNSMEKLLQKILSPNRLRLLCCLYY", "length": 317 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D4AEJ6-1", "protein_name": "Peroxisomal biogenesis factor 11 gamma", "gene_name": "Pex11g", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MALLNGLASALESYRGRDRLVRGSVGPWRDRSDLEFGQDSEMRKTGQRGGPKGTDIGRLVSYMRTSYLSLPNCWPYKCVLALQIRTLGYGCQLIGGVLVEQCPSRSEVGRRLLVVSAQLSHCRTVLRLFDDLAMFVYTKQYGLGAEEEDVFIRWLSVLSNMADQLYYPCEHVAWAADAKVLQVDSARWWTLSTAFWSLSLLLGAVKSLWTMLKLRQKLRSPTGHFASQLPRSKWRAVEARIWSEALTLLSNLADLANAVHWLPPGVLWAGCFPPWLVGLMGTISSILSVYQAARAGKQAEVDSP", "length": 304 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D6R901-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase 17-like protein 21", "gene_name": "USP17L21", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MEEDSLYLGGEWQFNHFSKLTSSRPDAAFAEIQRTSLPEKSPLSCETRVDLCDDLAPVARQLAPREKLPLSNRRPAAVGAGLQNMGNTCYVNASLQCLTYTPPLANYMLSREHSQTCHRHKGCMLCTMQAHITRALHNPGHVIQPSQALAAGFHRGKQEDAHEFLMFTVDAMKKACLPGHKQVDHHSKDTTLIHQIFGGYWRSQIKCLHCHGISDTFDPYLDIALDIQAAQSVQQALEQLVKPEELNGENAYHCGVCLQRAPASKMLTLLTSAKVLILVLKRFSDVTGNKIAKNVQYPECLDMQPYMSQPNTGPLVYVLYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASSITSVLSQQAYVLFYIQKSEWERHSESVSRGREPRALGAEDTDRRATQGELKRDHPCLQAPELDEHLVERATQESTLDHWKFLQEQNKTKPEFNVRKVEGTLPPDVLVIHQSKYKCGMKNHHPEQQSSLLNLSSSTPTHQESMNTGTLASLRGRARRSKGKNKHSKRALLVCQ", "length": 530 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "E0CXP6-1", "protein_name": "UMAP1-MVP12 associated (UMA) domain containing 1", "gene_name": "Umad1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFHFFRKPAESKKPSGPEPEADGFVLLGATANEVRCKTSEAEGSQALETGKEDTSSVTVSGPETENQTGQTLQNNSLTAELLSDVPFTLAPHVLAAQGTISDLPDHVLSYDVGDNLSRFWYDFTLENSVLCDL", "length": 133 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E0CZF1-1", "protein_name": "PRAME like 34", "gene_name": "Pramel34", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSGQTPPTHTLLTHEALIMSSLEELPTVVFPALFKEAFAGRHTNLLKAMVAAWPFPCLPVGPLMKKPNLETLQALLDGIDMRLTREFHPRRAKLQVLDMRNMYHAFWNIRADANDSDCKSKTLDEKQLVKVLPRYARRQRLKVIVNLSISSHFNKSKAYFLNWAKQRIGSLYFCCIKMRIWDPPDQVIRDIFNVFDPEHITELELNTDWTLLQLAHFASYFGHMKNLQKVFLAPLHKNTSPIINITNATEAKCVHKIISQFSQFNCLQHIFMKHVHFLRDYMNQVLGCLMTPLETLSITQCLISQRDFDLFSCSQNLFKLKHLEIRGMILYALDLMPLRVLLEKVADTLEILDFQWCRMKDSQINALLPALSQCTQLNQINFYNNDFSMCTLKALFQHTANWSKMNVEQYPAPLQCYSELGHVSVERFVQLCQELMYTLRAIRQPKSISFATDNCQKCGKPCVYDQGPILCSCFQ", "length": 475 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E1B8K9-1", "protein_name": "40S ribosomal protein S6", "gene_name": "", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MKLNISFPATGCQKVIEVDDERKLRTFYEKRMATEVAADTLGEEWKGHVVRISGGNDKQGFPMKQGVLTHGRVRLLLSKGHSCYRPRRTGERKCKSVRGCIVDANLSVLNLVIVKKGEKDIPGLTDTTVPHRLGPKRASRIRKLFNLSKEDDVRQYVVRNSLNKDGKKPRTKAPKIQRLMTPRVLQHKRRRIALKKQRTKKNKEEAAEYAKLLAKRMKEAKEKRQEQIAKRRRLSSLRASTSKSESSQK", "length": 249 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "E1BBD9-1", "protein_name": "RNA polymerase II subunit A C-terminal domain phosphatase SSU72", "gene_name": "LOC112445820", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MPFLPLRLAVVCSSNQNRSMEAHNILSKRGFSILSFGTGTNMKLPGPARDRPNVYDFRAMYDDVYKDLLRKDKERYMQNGVLRMLERNMEKEMPRPERFQECKDLFDLILTCEERVYDQVVEDMNSGEQETCQPVHVINVNILDTNKEATLGAFLICDLCQCVQLMGDMEDRIGELLQAFEEKSGRSFLHTVCFY", "length": 195 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "E1BLY1-1", "protein_name": "Small ribosomal subunit protein uS8", "gene_name": "", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIIRFLTVMMKHGYIGEFEIIDDHRAGKIVVNLTGRLNKCGVISPRFDVQLKDLEKWQNNLLSSRQFGFIVLTTSAGIMDHEEARRKHTGGKILGFFF", "length": 130 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "E7F638-1", "protein_name": "Moesin b", "gene_name": "msnb", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MSINVRVTTMDAELEFAIQSSTTGKQLFDQVVKTIGLREIWYFGLQYQDSKGFSTWLKLNKRVTAQDVRKENPLLIKFRAKFYPEDVAEELIQEATQRLFFLQVKEAILNDDIYCPPETAVLLASYAVQMKHSDYNSEHHIPGYLCRDKLLPQRVLEQHKLTKEQWEQRIQVWHEQHKSMSREDAMIEYLKISQDLEMYGVNYFSIKNKKGSELWLGVDALGLNIYERSDKLTPKIGFPWSEIRNISFNDKKFVIKPIDKKSPDFVFYAPRLRINKRILALCMGNHDLYMRRRKPDTIEVQQMKAQAREEKNKRQQERALLENEKKRRENAEKETEKIARETMELMERLRQIEEQTKKAQEELEEQTKRALELERERKFAQEEAEKLEKDRRIAEDVKTALLQQSENQTKNKDNLATELAELTSKINLLEDAKKKKEDEARKWQRRAIMVEVDLEKTKEELKSKLIGVHIQATSQTENDHDENDESSAEASAELTSTGSFRDRSEEQRITETEKNEPLQKRLQALSSELADARDDSKKTANDLIHAENVRLGRDKYKTLRQIRQGNTKQRIDEFESM", "length": 577 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "E7FA22-1", "protein_name": "Protein tyrosine phosphatase type IVA 3", "gene_name": "ptp4a3b", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MAWLNGLYPVEVCYNSMRFVITHNPTNQTLDTFIEDLKRYDAKTVVRVCESTYDKTPLEKHGITVMDWPFDDGAPPPTKIVDDWISLLKKSFSEDPGCCVAVHCVAGLGRAPVLVAVALIEGGMKYEEAIHLIRLKRHGAFNSKQLTYLEKYRSKKRLRFKDPFKHRSKCWLM", "length": 173 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "E7FE27-1", "protein_name": "Beta-1,4-N-acetylgalactosaminyltransferase", "gene_name": "b4galnt4b", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MRMRFPLKKIRKQFKLLLLLVLLMFAIGFTYLHINQGKAIKLHFNYGKDMERQAEGIGSSPKKHLSSSINPFEHGDAADSQEDGWGGEELNESAQESRANAEMHTLLAQKFLGLPWKPEYKGQANLHVFEDWCGSSVSQLRKNLHFPLYPHTRTTVKKIAVAPKWKNYGLRVFGFIHPYKDGDFQFAIASDDNSELWLSSDESPLNARLLVYVGQHGSEWTAPGEFSKFRSQTSKPVRLMSSRRYYFEVLHKQDDRGSDHVEVGWRPFLPGQKFDVIDSAYISLYTDESSLKMNSVHHIPQTLASHSLALQIYHRTETHTADMLKPDPRDTFYKIPMIDQSRLENVLPSCVYSPTYVVKDFPIARYQGLQFVYLSYVYPNDFTRLTHMEKTNKCFYRESPVYLEKFGFYKYMKMDEEEDDQPVFFPKPDDFLEEEEGVDPEEAINSSNRPVKRSGPSYQTSRITAATASSKPDRLDGGSKSSVFQQEKQYVQFKEQERSKKRTKGERFYRHSQVVDDEMTEIRQVKGSTGVLESQSGSLNEQTGPSEENGDSQTLSLVQRGRSLAWVLPDPALQSESKLIETASPTVKERSPFKLPHLYVLANRILGNAGKPVVEKESNSNKIYITRPRPPVSRPKPPVEVFPGVFLYQSRKSKRLVDLSSKWRSLKTQAAASAPWANFPLMDHKTSTQSALLKQSHLSSPTEPGPHNKGDPTASISDPDSVPPSSSEKRDHPGLNSSSQPPEEEPTKISEMAEGLDVAPQSRGLEEGEMSEYSYEEAEVRPHLAEEAINWQRTFSVNPVDFELLRSDWNDLRCNVSGNLQLAENEVIDVISQFMERLNERNRGIYTLARIVNVEKRRDSARGNRYLVELLLMEGGKRLVRLSEYIYLLLHRSRFEEGIESREGTVPSSHRTPSKIPLPSGSSAQTHTTTPWSTSWAKPLLCQPIMLQWRHDVMVHFVVPVKNQARWVQQFISDMELLHRETKDENFSVIIVDFQSDDMDVEQALKESTVPRYEYLKREGNFERSSGLQMGVDTIEDSHSIVFLCDLHIHFPHNILESIRKHCVEGRLAFAPIVMRLDCGSSPLEPDGFWEVNGFGLFGIYKSDFDKIGGMNTEEFKDHWGGEDWELLDRVLQNGLEVERLRLRNFYHYFHSKRGMWNVPVKRASQG", "length": 1167 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "E7FFR8-1", "protein_name": "Ubiquinol-cytochrome c reductase complex assembly factor 5", "gene_name": "uqcc5", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MLRKSQNLKYMLSLVPGKKRFGVYRFLPVFFCIGGVMEWIMINVRIGRETFYDVYRRKQSERAYQQKTEEGLIMLTDSQAK", "length": 81 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "E9PUW9-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r143", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSAHGKSVKTTEEVALQILLLCQFGVGTVANVFLFFHNFSPVLTGSKQRPRQVILSHMAVANALTLFLTIFPNNMSAFAPKTPPNELKCKLEFFSHMVARSKNLCSTCVLSIHQFVTLVPVNRGKGKLILRASVPNLWNYSCYSCWFYSVLSNIHIPIKVTGPQITDNNTDSKSNLFCSTSGFIVGMVFLQFSHDATFMSIMVWTSVSMVLLLHRHRQRMQHILTPNQDARGQAETRATHTILMLVVTFVSFYLLNCICIIFHAFSIHSRLFIRLVSEVLAAVFPSICPLLLIFRDPKDPCSVLFKC", "length": 307 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9PUZ0-1", "protein_name": "Apolipoprotein L 11b", "gene_name": "Apol11b", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDWNEISEDIRKVECRTFEKVIDNATEDLITDLRSLITEDGAWNGFVEAVELSSEEGEALRDALKERLAQDPTDENDRPQREQQKERFLREFPQLKKKLEDHIRKLRDLADKFDQVHKDCTISNVVSTSASAASGVLALLGLVLSTVTAGASLALSASSVALGATSSVSSFTTTVVEDSMTLSYESEARNLIGASMNVLEEILSIMPKITCKFYNTVADLVKAFKTLKGQIQTIRRARSISRRGAQARNLTSTGRSSGQGVSQMTRGARIRAGVFTSVFLGWDVYDLVTKQRICMMGEKQSQVEHCGTWLASWRRTFRNLSRSTMLCSQTCLSDALP", "length": 337 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9PV04-1", "protein_name": "Eukaryotic initiation factor 4A-III", "gene_name": "Eif4a3l1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MATTTRMATSGSARKRLLKEDGMTKVEFETSEEVDATPTFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIMKGRDVIAQSQSGTGKTATFSISVLQCLDIQVRETQALILAPTRELAVQIQKGLLALGDYMNVQCHACVGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLTTRAIKMLVLDEADEMLNRGFKEQIYDVYRYLPPATQVVLVSATLPHEILEMTNKFMTHPIRILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCITKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNLADLI", "length": 411 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9PVP9-1", "protein_name": "Predicted gene 4884", "gene_name": "Gm4884", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSENLQSSPFFGTESTLHPSLPLLSNSKQPAGTVCNFSRVSTPDVSSAWLLPSASSTSLQPLMVVQMETSLGLPPSGQTYCQLQSPELCNTCVQVSQIRPPAVNGDKALTAPIHSPSQFLALPPAPSLEQPENKTMPEIKEGTKENQDTPVLTLEHPDLQQPLHCTDTESLRQKPDSDNAHLGCICMGPKELVGLENEIGSSFDFKDITRFGADIQLPQLLNTLTDIDQDQSCENWRVTSGLFDQVRENKHKSFELLEGAPQAKFQHWDLVEGEGAVGVAGASDRAIDNMAKHPEGKAPKGPPSKNRRARKQEQERPSGPENKSKKTQELKQSRNRVKAEKEPSIPKTKRKRNPPELSQNSFKKPRTNLAMHMLESVQVFHPLGKKSEKKTGISSFRGLRTFTSNKDSGPGSVTTTVLNMPCESQGPPKSPGKVQSAESSVGKDCLSPSQYELPPAGKVKLVPLPFPTLDKPQSRPASRKPLSLALRRPTAVYPVQHHSHSVQPTTLRPAQPPPASSSLIASAKPAPPISSSATGPNVTNPNQSSAVPQLATSRPVPYRASSHTSFQRELVSAARNKVPSPPRPVPYRASSNTSFQRELVSAARNKVPSPPKPQTQYLLHDFSRQPIPWKKVDILGPVVSQPITKEQRPEREAMKRRSQQERENAVKNPSTGKLQIFLQRERDMEISQYYGYAM", "length": 694 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9PVW0-1", "protein_name": "Major urinary protein 8", "gene_name": "Mup8", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKMLLLLCVGLTLVCVHAEEASSTGRNFNVEKINGEWHTIILASDKREKIEDNGNFRLFLEQIRVLENSLVLKVHTVRDEECSELSMVADKTEKAGEYSVTYDGFNTFTIPKTDYDNFLMAHLINEKDGETFQLMGLYGREPDLSSDIKERFAQLCEEHGILRENIIDLSNAMDLVPEHVLVLTRQIAASRPENEEWPEPPVLSGDFSPGLHHHPFLSIQHPQYKFCDLHSILSH", "length": 235 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9PVZ7-1", "protein_name": "Olfactory receptor", "gene_name": "Or8b3b", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKYFCLPRFSIISMLTGNGSFVTEFVLAGLTDRPELQLPLFYLFLIIYTVTVVGNLGLIILIGLNPHLYTPMYYFLFNLSFIDLCYSSVSSPKMLMNFVFEKNSISYEGCMTQLFFFLFFVISECYMLTSMAYDRYVAICNPLLYKVTMSPQVCSMLSFASYGMAFAGASAHTGCMLRLIFCNANVINFYLCDILPLLQLSCTSTYVNEVVVLIVVGINITVPSFTILISYVFILANILNIKSTQGRSKAFSTCSSHIMAISLFFGSGAFMYLNHSGSMNQGKISSVFYTNVVPMFNPLIYSLRNKDVKIALKKVMMRVHSRFIS", "length": 325 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9PW18-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r257", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSVHDKSVKTTEEVALQLLLLCQFGVGTVANVFLFVHNFSPVLTGYKQRPRQVILSHMAVANALTLFLTIFPNNMMAFAPKTPPNELKCKLESFSRLVARSTNLCSTCVLSIHQFVTLFPLSRGKGKLILRASVQNLASYSCYSCWFFSVLSNIHIPIKVTGPQITDNNTDSKSNLFCSTSGFIVGIVLQFAHDATFMSIMIWTSVSMILLLHRHCQRMQDILTPNQNPRGQAETRATRTILMLVVTFVSFYLLNCICIIFHAFFIHSRLFIRLVSEVLAAVFPSICPLLLIFRDPKDPCSVLFKC", "length": 306 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9PW59-1", "protein_name": "Olfactory receptor", "gene_name": "Or8b50", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MALANGSFVTEFILLGLTDQPDLQMPLFLIFLIIYLITAFGNLTLIILIVLNSHLHTPMYFFLFNLSFIDLCYSSLITPKMLMNFVLEKNIISYMGCMTQFYFFGFFAISECYVLTAMAYDRYVAICNPLLYSVAMSPKMCSYFILGSYFMGFSGAMIHTGCVMRLTFCDGNTINHYFCDLLPLLQLSCTSTYVNEIELFIVTGKDIIVPTVIIFASYGFILSNILKIRSTSGRSKAFSTCSSHIIAVSMFFGSSAFMYLKPSSAVSMNEAKFSSIFYSIVVPMMNPLIYSLRNKDVKVGLKKTLSRMFSHNLISL", "length": 316 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9PXC3-1", "protein_name": "Cytochrome P450, family 2, subfamily c, polypeptide 69", "gene_name": "Cyp2c69", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDPFVVLVLCLSFMLLLSLWRQRSARRNLPPGPTPLPIIGNYHLIDMKDIGQCLTNFSKTYGPVFTLYFGSQPIVVLHGYEAIKEALIDHGEVFSGRGSFPFFDKVSKGKGIGFSHGNVWKATRVFTVNTLRNLAMGKRTIENKVQEEAQWLMKELKKTNGSPCDPQFIIGCAPCNVICSIVFQNRFDYKDKDFLSLIGKVNECTEILSSPGCQIFNAVPILIDYCPGRHNKFFKNHTWIKSYLLEKIKEHEESLDVTNPRDFIDYFLIQRRQDKGIEHMEYTIEHLATLVTDLVFGGTETLSSTMRFALLLLMKHTHITAKVQEEIDNVIGRHRSPCMQDRKHMPYTNAMVHEVQRYVDLGPTSLVHEVTCDTKFRNYFIPKGTQVMTSLSSVLHDSTEFPNPEVFDPGHFLDDNGNFKKSDYFVPFSAGKRICVGESLARMELFLFLTTILQNFKLKPLVDPKDIDTTPKYSGFSKIPPKFQMCFIPVE", "length": 491 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9PXM9-1", "protein_name": "F-box and WD-40 domain protein 24", "gene_name": "Fbxw24", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEIHLSSFPMMEIFSYLDAYSLLQVAQVNKNWNALASNDFLWRKLCQERWLFCDMVTLQLLGKETWKQFFVYRTWQEHVKSRAIPEDFTYKEIPLECGVRGYAGYISGCALTRNGQGKSVVCMVSSKNKISTWDISESVITWVSPVQPASIKLLTTLPDMHIAVTVDIQSTIKLWDCHNREALATNNLESPCKSLKAVISKDGPIVLAGDILGNLYIFRIPDLHLISTVNVFPCGFDKIDCSPQKKWVLLSQNHPCIYPKVFYMSSLLRTSEFSDPVSTVLEFSLCKRAFWTPRREDRITLMSRRGRPIVTRFETFDMKLEENGNKTIVKGDLVASFSLQDYNENPKWMGVSDKSVIVCSTGSSLLLFSMKGLHLQTFQYSPEMIVRLWVDPVHVIITCNDGSIDVYMWEERSLLLKMCYRLQNGRHLPPFGFIKNLLCDDVSIVQLMIDRQGPCFLMAYTLNICS", "length": 466 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q069-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r157", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSAHGKSVKTTEEVALQILLLCHFEVGTVANVFLFVHNFSPVLTGYKQRPRQVILSHMAVANALTLFLTIFPNNMMAFAPKTPPTELKCKLEFFSHMVARSTNLCSTCVLSVHQFVTLVPVNRGKGKLILRASVPNFANYSCYSCWFFSVLSNIHIPIKVTGPQIIDNNTYDKSNLFCSTSGFIVGIVFLQISHDATFMSIMVWTSVSMVLLLLTPNQDARGQAETRATHTILMLVVTFVSFYLLNCICIIFHAFSIHSRLFIRLVSEVLAAVFPSICPLLLIFRDPNDPCSVLFKC", "length": 297 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q0V3-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r68", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGVAIIKENQTQSKMDFWNMGIKILFLSQTTTGILGNFSLIIYYVVNYIVHTLKPTDLILMHLMTSNALMVLSTGVLHTMAAFGLAHLLNDLGCRLILYIQRVGRSTSIGTICLLSIFQAITISHRVSCYKGQKIKSSKYIGYSISLLWVLHMFLNFILFVDIFIKRNRNNMTSDRDFKYYSIVERNEFSDSLYVALVVCPEIFSSVLITCSSGSMIGILYRHKQRVQHIRSFHVSSRNSPEWRATQNILVLVSTFLAFYTLSSVLQGCIALLNNPNWWLVNITRLTSLCFPTFAPCVLMSHYSFMPRFSLVWTWNKTS", "length": 319 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q1C7-1", "protein_name": "Spermatogenesis associated glutamate (E)-rich protein 4A2", "gene_name": "Speer4a2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MWMGETREGRKDADLPSKSNEGRRRWTWRMWMAHRQKTSPVPVTSKKQFEKEEKELIKKIQLTTEETNELRDRLIYVTEGSMNKRPYHRQTRHYKELKLKEKEIMTFLHNLEMENMEARENKQELKKEKNFYRNLHTRILLEENLIKKKLAILQQESKEIHADWAIIHQRLVELNLSGKDEQEKTSNLETQEHQVSEAARELGLATAEEDSILQNELPCQEAPAEHHPQHPPSSSDESSSDESSYSTCPEWE", "length": 252 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q1N7-1", "protein_name": "Predicted gene 8126", "gene_name": "Gm8126", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFSWLRRLFHRENGNQGETRPRQKESAIPSCKNRRMKSFWGRHMSAGKTSSQNCNITNHMKNRNKLDDMKFYIRKINAERLELFRILDIDMNTDLNYRMNIEFTIIKSQHEKTMLDMEKITQSINDTIEKYKEFIEDKDSYSFMHTYLLKECNQLKEKVRMLLNENRKLLVEQADQEASYGEENRFCHESSKNIHPKY", "length": 198 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q328-1", "protein_name": "RIKEN cDNA 5430401F13 gene", "gene_name": "5430401F13Rik", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MASSRILLVLLSIALLALTSAQRVNEDDGSALQEEDALEIGDSNQQHDDIHERLNEIKNHFQDQISQHGKEAIKSKKGKNGPRSRRSSDDDNLEVQDHQSGNEQAGGGQGGRGRSELKGQNGKGSQKGKKGKGGQQEQKGKGGQQKQKGKGGQKTKRGKGGQRSQQDNVQEVYQE", "length": 175 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q346-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r160", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSAHGKSLKTTEEVALQLLLLCQFGVGTVANVFLFVHNFSPVLTGSKQRPRQVILIHMAVANALTLFLTIFPNNMSAFAPKTPPTELKCKLEFFSHMVARSTNLCSTCVLSIHQFVTLVPVNRGKGKLILRASIPNLWNYSCYNCWFYSVLSNIHIPIKVTGPQITDNNTDSKSKLFCSTSGFIVGMVFLQFAYDATFMIIMVWTSVSMVLLLHRHRQRMQHILTPNQNPRGQAETRATRTILMLVVTFVSFYLLNFICIIFHAFSIHSHLFIRLVSVVLAAVFPSICPLLLIFRDPKDPCSVLFKC", "length": 307 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q366-1", "protein_name": "Spermatogenesis associated glutamate (E)-rich protein 4f2", "gene_name": "Speer4f2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MTMCVRLRRLFQRANVDGRETREGSMDAGLPCERNEGRRRWTWRMWMAHRQTSSPVPVTSNQFEKEEEELMEEIQLISQEKNGLRDYLNLTLGSKITRLNQSYEELKLKQKELMTLQHDLEMATMEAREENEELKKEINFYSNLHSRALMENNLIKKKLMTLQQESKEVQAEWASIQQHLDVNLSGKDEQENNSILDTQEHQVSETARELGLATDQEDSILQDELPPQEAPAEELSPQEAPAEELPPQEAPAEQLPPQEGPAEELPPQESPAEHHLQHPQSFSDESSYITYPEWE", "length": 295 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q3G0-1", "protein_name": "Zinc finger and SCAN domain containing 4B", "gene_name": "Zscan4b", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MASQQAPAKDLQTNNLEFTPTDSSGVQWAEDISNSPSAQLNFSPSNNGCWATQELQSLWKMFNSWLQPEKQTKEQMISQLVLEQFLLTGHCKDKYALTEKWKASGSDMRRFMESLTDECLKPPVMVHVSMQGQEALFSENMPLKEVIKLLKQQQSATRPIPDNAQMPVDTTQDRLLATGQENSENECNTSCNATEVNVGESCSGNEKDSLLITQKEQNHEHEEGNVVCQFPRGARRASQDTSSHHVDFPSALTPADVPMEEQPMDLSRENISEDKNNCYNTSRNAATQVYSGDNIPRNKTDSLFINKRIYHPEPEVGDIPYGVPQDSTRASQGTSTCLQESLGECFSEKDPREVPGLQSRQEQPISDPVLGKNHEANLPCESHQKRFHRDAKLYKCEECSRMFKHARSLSSHQRTHLNKKSELLCITCQKIFKRVSDLRTHEIIHMSEKPFKCSTCEKSFSHKTNLKYHEMIHTGEMPYVCSLCSRRFRQSSTYHRHLRNYHRSD", "length": 505 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q4E0-1", "protein_name": "RIKEN cDNA 5031410I06 gene", "gene_name": "5031410I06Rik", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MALFARLCRLFQRVNVDGRETREGRKDADLPSERNEGRRRWTWRMCMAHRQTTSPVPVKSKKQFEKEEKELIKKIQLTTEETNELRDRLIYVTEGSMNKRPYHRQTRHYKELKLKEKEIMTFLHDLEMKNMEARENNQELKKEKNFYRNLHTRILLGENLIKKKLAILQQESKEIHADWAIIQQRLVELNLSGKDEQEKTSNLEAQENQVSEAARELGLATAEEDSILQNELPCQEAPAEHHPQHPSSSSDESSSDESSYSTCPEWE", "length": 267 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q501-1", "protein_name": "Predicted gene 2237", "gene_name": "Gm2237", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFSWLLRLFQKENVDEGETRPTEKEEGILSHEKGRRKWFWRRHRSARNTSTQNSKMTKKRSKINELEELKLDMRKISNDMEEMCGILNLYMYEDLNYRMNTEFNIIKSQHEKTMLDMNKMIQSIIGSMQYSKELIEDNYSYSIKEDHLLRECTQLHENVRILLNENRRLLVEQAGHKCPVGKKRGSLRRPARTSVSQVPRNSSPAESRTWH", "length": 211 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q5G7-1", "protein_name": "Oogenesin-1", "gene_name": "Oog1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MVICLHCPDQDDSLEEVTEECYSPPTLQNLAIQSLLRDEALAISALTDLPQSLFPVIFEEAFTDGYIGILKAMIPVWPFPYLSLGKQINNCNLETLKAMLEGLDILLAQKVQTSRCKLRVINWREDDLKIWAGSHEGEGLPDFRTEKQPIENSAGCEVKKELKVTTEVLRMKGRLDESTTYLLQWAQQRKDSIHLFCRKLLIEGLTKASVIEIFKTVHADCIQELILRCICIEELAFLNPYLKLMKSLFTLTLDHIIGTFSLGDSEKLDEETIFSLISQLPTLHCLQKLYVNDVPFIKGNLKEYLRCLKKPLETLCISNCDLSQSDLDCLPYCLNICELKHLHISDIYLCDLLLEPLGFLLERVGDTLKTLELDSCCIVDFQFSALLPALSQCSHLREVTFYDNDVSLPFLKQLLHHTALLSQLIYECYPAPLECYDDSGVILTHRLESFCPELLDILRAKRQLHSVSFQTTKCSKCGGCYIYDRHTQCCRFVELL", "length": 496 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q6D7-1", "protein_name": "RIKEN cDNA 1700024B05 gene", "gene_name": "1700024B05Rik", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MESHDNPVSAGRTSSQNCNITNHMKNMNKLDDMKFYIRKINAELEELFRILDIDMNTDLNYRMNTEFTIIKSQHEKTMLDMEKMKQSISDSIDKYKEFIEDNDSYSIRHTHLLKECNQLKEKVRMLLNENRKLLVEQADQEASFGEEKSSVMRPARTYIPSAKQQQL", "length": 167 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q7M8-1", "protein_name": "Predicted gene 5796", "gene_name": "Gm5796", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFSWLLRLFQKENGDEGETRPKKKEEGILSHEKGRRKSFWRRHRSARNTSTQNSKMTKKRSKRNELEELKLDMRKISNDMEEMCGILNLYMYEDLNYRMNTEFNIIKSQHEKTMLDMNKMIQSIIGSMQYSKELIEDNYSYSIKEDHLLRECTQLNENVRILLNENRRLLVEQSGHKCPVGKKRGSLRRPARTSVSQVPRNSSVI", "length": 205 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q8A4-1", "protein_name": "F-box and WD-40 domain protein 28", "gene_name": "Fbxw28", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEIHLPSVPMMEILSYLDAYSLLQAAQVNKNWNELASSDVLWRKLCQKRWLYCYMFTLPLHGLETWKQFFFDKTWQEHAKTRAKPEDFTYKEFPVEFEFRAHPWYISRHGLTRNGQEKSAVCMTSMNRISTWDIHEGAMTWESPKQPSYIVWMTTLPEMQIAVTIDMQSTIKLWDCHNKEVLASKTGLFFGCKLLQSEFTKDGPIVLVGDACGNLYIFRIPDLHLISKVNVFPYSIDELYFSPQKKWVFLIGHRLNDLTKVFYMSSLLRPSEFSAPVSTVLKVPVIRKVFWTPRREDRITLMSLILPKNITKFDTFDMKLEGIGNKVTIQGYLTASFSLAEDEGRPDYFGVSDKDVIVCSTRFSLLLFDINGLRLQTFHYCPEEIWRLWVDPVHVIVTCDAGSLDIYAWEKRSLLLRKCYRLRNRNYQQMSGYIIKTLCDDMSIISVANNSPKPCCLMAYTLSVCS", "length": 466 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q8I6-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r55", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEMLALQILLLCQVVVGTVGNILLFVHNFSPILTDSRLRPIQVILINLAVANAFMLLLLTYSHDMIDLVPKNPPTDLKCKLAHFFHMVARGTNMCSTCVLSTYQFVTLVPGNWARVMFREISPKVVRYSCYSCWLFSVLNNAYIPMNVRGPKKSHNDSDSQGKRMCSISVVNVDMNYLQFSYDIIFIGIMVWTSVSMVIHLNRHHQRMHYIHNPNQSNRGHAETRAAHTILMLVVTFVSLYILNCICVLFHVSFVESRRWLRNVIEFLALSFPTISPLLLIFRDPRGPCSLYFNVGLEIHVTGKVITEEQ", "length": 310 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q8L6-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r132", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSAHGKSVKTTEEVALQILLLCQFGVGTVANVFLFVHNFSPVLTGSKQRPRQVILSHMAVANALTLFLTIFPNNMMAFAPKTPPTELKCKLEFFSHMVARSTNLCSTCVLSVHQFVTLVPVNRGKGKLILRASVPNLWNYSCYSCWFFSVLSNIHIPIKVTGPQIIDNNTYDKSNLFCSTSGFIVGIVFLQISHDATFMSIMVWTSVSMVLLLLTPNQDARGQAETRATHTILMLVVTFVSFYLLNCICIIFHAFSIHSRLFIRLVSEVLAAVFPSICPLLLIFRDPNDPCSVLFKC", "length": 297 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q8T0-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r7", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSSFKNVLYFQTGLGVLANTVLLFFYVFIILGHRPKPTDLISCQLSFVHIMVVLIGGDILLADIFESLNIGNDFKCKTTFYLFRVMRGLSICITCLLSVFQAVTISPNTSVLAKFKQKVKKYMTHVFLCIWFFNLSFSTNQIFYVGGFTNVSETNQMQVTKSCSLLPMNYIIRGLIFTISISRDVFLVGVMLTTSVYMVIFLFRHQRQCKHLHSFSHPRESPEKRATQTIMLLVSFFVVLYWMDFIISFTSEMLRMYDPVILTLQKFMMYAYPTITPLVQISSDNRIIIMLKNIQSKCHPSFSLKDFFFFI", "length": 311 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q8V7-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r173", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSALNKALKTTEEVALQIILLCQVGIAAVANILLLVHNLSPNFAGPQLRPKHVILAHITVGNLLIILLTGFPSNIIVFVPRNPLNDLNCKLEYFIRLVARSANMCTTCVLSTYQFIVLVPGKWSRMILRGNTSTFVHYSCNSCWIISVLNNVYIPIKISGPWNTDNDTDLNSKWVCSMSGFELVMVFLRFVHDTMFISIMVWTSVSMMLLLYRHHQSLKHIHRSNGSLGLQPEARAAYTILMLVVTFVCFYLLDCMCIFFHISFVHFRVWLRHVNEILAASFPTLSPLMLIFRGPKKISAKGINTENAFINSH", "length": 313 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q9N3-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r152", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSAHGKSVKTTEEVALQILLLCQFGVGTVANVFLFVHNFSPVLTGSKQRPRQVILSHMAVANALTLFLTIFPNNMSAFASKTPPNELKCKLEFFSHMVARSKNLCSTCVLSIHQFVTLVPVNRGKGKLILRASVPNLWNYSCYSCWFYSVLSNIHIPIKVTGPQITDNNTDSKSNLFGSTSGFIVGMVFLQFSHDATFMTIMVWTSVSMVLLLHRHRQQMQHILTPNQDARGQAETRATHTILMLVVTFVRFYLLNCICIIFHAFSIHSRLFIRLVSEVLAAVFPSICPLLLIFRDPKDPCSVLFKC", "length": 307 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9QAN3-1", "protein_name": "Predicted gene 1979", "gene_name": "Gm1979", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MALFARLCRLFQRANVDGRETREGRKDADLPPESNEGRRRWTWRMWMAHRQKTSPVPVTSKKQFEKEEKELIKKIQLTTEETNELRDRLIYVTEGSMNKRPYHRQTRHYKELKLKEKEIMTYLHELEMKNMEARENKQELKKEKNFYRNLHTRILLEENLIKKKLAILQQESKEIHADWAIIQQRLVELNLSGKDEQEKTSNLETQEHQVSEAARELGLATAEEDSILQNELPCQEAPAEHHPQHPPSSSDESSSDESSYSTCPEWE", "length": 267 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9QD93-1", "protein_name": "Granzyme K", "gene_name": "gzma", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MDICRNLIVFHFLVFTFFKVTVCSDVSIVGGKDVKKALSWMVSIQVNQNHKCGGILIHKEWVLTAAHCKEDSYSSVTVLIGSLSLSKGSQRIAIHNYEIPETFNKKTKKDDIMLIRLSKKVKAKPYKIPKKEKDVQPGTKCVVRGWGTTDYKGKQASDKLQMLEVLVVDRVQCNRYYNRNPVITKDMLCAGNTQQHRGTCLGDSGGPLECEKNLVGVLSGSHGCGDPKKPTVYTLLSKRHITWINKILKQQFNSTRF", "length": 257 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "E9QLQ1-1", "protein_name": "Defensin, alpha, 35", "gene_name": "Defa35", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKTFVLLSALVLLAFQVQADPIHKTDEETNTEEQPGEEDQAVSISFGGQEGSALHDELSKKLICYCRIRGCKRRERVFGTCRNLFLTFVFCCS", "length": 93 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "F1LPT0-1", "protein_name": "Gap junction protein", "gene_name": "Gjc3", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MCCSFLRQLLARESQHSTPVGRFLLPVLVGFRLLILVSSGPGVFGNDENEFMCHLGQPGCKTICYDVFRPLSPLRFWAFQVILMAVPSAIYVAFTLYHVIGYWEVPGRNKEQEAQICKGGRCKDVSGAMSLKLLWAYVAHLGVRLVLEGAALGVQYHLYGFKMPSTFICREDPCIGSTTCFQSHPSEKTILLNTMFGISGACLLFIFLELVLLGLGRVWKTYRHKLPLFKNLSTSERSVRHKDTTDDLSVVETKEPF", "length": 257 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "F1LT33-1", "protein_name": "Cytochrome P450", "gene_name": "Cyp2b14", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MELGVFLLLTFTVGFLLLLASQNRPKTHGHLPPGPRPLPFLGNLLQMNRRGLLRSFMQLQEKYGDVFTVHLGPRPVVILCGTDTIREALVDQAEAFSGRGTVAVLHPVVQGYGVIFANGERWKILRRFSLVTMRNFGMGKRSVEERIKEEAQCLVEELKKYKGALLNPTSIFQSIAANIICSIVFGERFDYKDHQFLRLLDLIYQTFSLMGSLSSQVFELFSGFLKYFPGVHKQISKNLQEILNYIDHSVEKHRATLDPNTPRDFIDTYLLHMEKEKSNHHTEFHHQNLVISVLSLFFAGTETTSTTLRYSFLIMLKYPHVAEKVQKEIDQVISSHRLPTLDDRIKMPYTDAVIHEIQRFADLAPIGLPHRVTKDTMFRGYLLPKNTEVYPILSSALHDPRYFDHPDTFNPEHFLDANGTLKKSEAFLPFSTGKRTCLGEGIARNELFIFFTALLQNFSLASPVAPEDIDLTPINSGAGKIPSPYQINFLSRCVG", "length": 495 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "F1LYQ4-1", "protein_name": "Alpha-1-B glycoprotein like 1", "gene_name": "A1bgl1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MDLLVLLEPLASLTLTCKVCEPSKDLHRILHLSSMETACTLSLALPPTLPSASLIFSASGVHTLILLRVRLNHSLILLSLIHTGPLPRPWLSANPVPWITPGLRTFLLCQGTVRDVVFMLRREGDDGNKEKEQGIFQVHEPGNYSCNYYTNTEYTPSKPSGTVTIKEYVIPPPPMLTSLESSTVDEPEMTQMSLLCVAPLSDVEFQLRQGEREMKVLIVSTSPERASFYLKLSDMGDHSPFTCRYRLNRMTAWSEDSKPVQLMWSDETLPEPVLTVEPSPHQSFEPGSTVQFRCTAPKAGLRSEAGLRFGLHLEDLYDHRLLQTQKSSGNETVFQLRNVSATDSASYSCIYTELTPPYSGSAPSDFVILRVNGPPPPPKLQALWTGKVFAGHDVVLRCQSDVTGVIVELLRDGKFVPYRILRVLNNYSDLGLHSVGPQHTGNYTCRYTSWLPEPVQSEPSNPVELLVEGMASGVVVVGFCLLIFPGLCILVNCAI", "length": 495 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "F1M6N1-1", "protein_name": "Zinc finger protein 945 like 1", "gene_name": "Zfp945l1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MTASLVNVSKCLLTFRDVAVEFSMEEWECLNYSQKTLYRDVMMENYNNLLFVENHCKYKKVLDQDPNSIVHNVNIYEKAYECNELVKMTHESSQGTPFKTKHKDASLQISTLNRQKIGNTRDEPCKFKDCINFLNVFVIRQNQRIYIGEKEPTTIEYENHYNSKHEVMLKQSNSTGNKPHIFRKYGQCFKIYSSFSRYQNDHTSEKFYKCIKCRKSFLHLSQLKVHYKIHYRKYPCKCTACSKCFYHTFGFKRHYSIHPEVNTYKSSDCDKSFIYYSSLRKHQKIFGGERHYECNEGLRSLYTVFQPVYYYIPHIGEKAYKCSECEKCFTRKYHLTVHQRIHTGEKPYKCGECDKCFTRKYHLTDHQRIHTGEKPYKCSECKKCFTRKYHLTDHQRIHTVEKPYKCSECGMSFMKKYHLRSHQSIHTGEKPYNCSECDKGFTYKGHLRRHQKIHTGEKPYKCSECAKCFTENSKLRRHQRIHTGENLYKCSECDRCFIENNKLRSHQKVHIGEKPYKYSEYDKCLTQKGSLRSHQLIHTGEKPY", "length": 544 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "F1M7A9-1", "protein_name": "Large ribosomal subunit protein uL6", "gene_name": "AABR07026048.1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MANRLAHRPIQWRNFLSQDSLDQDTMRKKTILSNQTVDIPENVDITLKGRTAIVEGPRGTLRRDFNHINVELSLLGKKEKRLRVDKWWGNGKELATVRTICSHVQNVIKGVTLGFCYKMRSVYAHFPINVVIQENGSLVEIRNFLGEKYIRRVWMRTNVACSVSQAQKDELILEGNDIELVSNSAALIQQGTTVKNKDISKFLDGIYVSEKGTVQQADE", "length": 219 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "F1M9J5-1", "protein_name": "Uncharacterized protein", "gene_name": "Esp1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "ITFLPVTLFLIILLWPSMITEGRVLTQNQKELSISADHNKNHKSDLDKIEFQGQPNIQKAVEMTICASDKDQTLLEDQANANQDKQLYKDSHLLCGRSLDHIVK", "length": 104 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "F1QDL3-1", "protein_name": "Novel nacht domain containing protein", "gene_name": "LOC560232", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MEDKHTPGDLDLSTGCSSVHQNRAEAEPSCVSMKSDVSMDPPTNFKSGNTGPAVSSRKRKRAEAEPSCVSMKSDASMDPPLKFKSKNTQPAVSVDRDDQSGDLLQDSLQPEHDELQRVKEQHKTTMKNKHERLFEGINHGETQTLLNRIYTQLYIIEGESEGVNEEHEVIQMEKRARTKPSQHTPVYCNDIFKASAGAGHEVKIKKEKAQIKTVLTKGIAGIGKTVSVQKFILDWAEGKANQDVDFMFVLPFRELNLIRDHQYSLHRLLLDFHPELEDLEPKIYEQCRVVFIFDGLDESRITLNFSDEEKVCAVTESSSVAVLMWSLLKGDLLPSALIWITSRPAAAHQIPSRYIKRLTEIQGFTEPQKEEYFRKRISDEHQASRIISHIRRARSLQIMCHIPVFCWISSTVLQKLLEEDVSAEIPQTLTEMYIHFLLIQINMRKQKYEERDPEKLLQSNRGVILKLAEVAFRQLMKGNVMFYEEDLIESGIDVTDALVYSGICTEIFKEESVIQQRKVYSFIHLSFQEFLAAFFVFYCHLTKKRELLELILGYSYDQYLQSSSEKSLYDLLSSAVDEAVRSSNGHLDLFLRFLLGVSLESNQRLFQDLLTHTEESSESIRRITQYIKDQIKSDDYFKRAAERFINLFLCLLEVKDQTLAREIQEFVKSDKHSEEELSPAHCSTISYMIEMSEEPLDEFELQKFNTSAEGRLRLTTAVRNCRRAL", "length": 725 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "F1QGM0-1", "protein_name": "Galectin", "gene_name": "lgals1l1", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MPTVLIQNMAFKVGQTLTLTGVPKPESPEFTIDIGNSSEDIALHINPRFDAHGDQCIIVCNTFQNDCWCEEHRDENFPFVQGEEFQIKITFTNEEFLVTLPDGSEINFPNRQGSEKYKYMNFTGQARIQGIEIK", "length": 134 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "F1QMQ9-1", "protein_name": "Uncharacterized protein LOC541480", "gene_name": "si:ch1073-398c20.1", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MADIKQESDDIRIAEVFTLKQEDPEEQTDLLPLRKEFQGLDNVKEEEALVEEHQDITPAEKRITCSETENTTQKASEKTGSRSSFTCEQCGRDFAKQGTLNNHMRIHTGEKSFTCQQCGKGFTQKRTLRNHIRFHIEAESLSCQQCGESFTQKQDLTDHMRVHTGEKSFVCDQCGKVFLRKDGLEKHLKNHHKEKPHVCPCGKSFTDKTKLEEHTKTHTGEKPHTCDKCDECFSGKYDLIRHMRFHSAETPYICQQCGKSFALKRVLMTHVKIHTRDRPFLCKQCGKCFYRKDNFNRHVRVHTGEKPYACSECGKSFSERFQFNEHSRTHSGVKRFSCEQCGRGFNRKTELKRHMRVHTGEKPYMCPQCGKTYAFKTGFDIHMLHHNAEMPYICPQCGERFSVKQRFDVHMKIHAGNSDK", "length": 420 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "F1R1Q6-1", "protein_name": "Uncharacterized protein LOC641576", "gene_name": "zgc:152710", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MVLIWTQFGVKHKNVKCKVRVIHGEEGSWSSEEVREEPEVSSPPPSPECVDYYSVLGVSNDSNEEEIRKAYKRLALRYHPDKNSDADAEDKFKQIAQAYDVLTDPEKRNIYDQQGLTKGGVAPTCNKTDPSHNSKADAHSWHMFFNFDLDSDDDLFNPFTRNPLPHLSRHHGNKGGLKPAGDAEVHDLSVSLEDILMGVTKRVKLTRLRQTDKHTLKPEERVFDVEVKKGWKEGTRITFPNEGHQMLGHAPNDLAFVIKEKKHAHFRRDGSHIVYTCTITLREALCGCTVNVPTLDGQMKPLPCSDVIKPSSVRRLIGEGLPRAKNPAQRGDLLVEFQVVFPDRIPPSSKEIIKHSLGQC", "length": 360 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "F1RA39-5", "protein_name": "[F-actin]-monooxygenase mical2b", "gene_name": "mical2b", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MGETEEERTSQAGQLFENFIQATTCKGTLQAFSVLCRQLELNPSDHRGFYSSLKTAVTFWKAKGLWGKLDKRAGHKEYSKGRACADTRCLIIGGGPCGFRTAIELALLGAKVVVIEKRDTFSRNNVLHLWPYTIHDLRNLGAKKFYGKFCAGSIDHISIRQLQLMLLKIALIVGVEVHVNVEFVKLLEPPEDQSTDGQGWRAEIRPADNPVSDYEFDVIIGADGRRSTLDGFRRKEFRGKLAIAITANFVNRNTTAEAKVEEISGVAFIFNQKFFLELKEETGIDLENIVYYKDNTHYFVMTAKKQSLLDKGVIINDYIETERLLAFDNVNQEALLSYAREAADFGTNYQLPSLDYAINHYGQPDVAMFDFTCMYASENAALVREKSHRQLLVALVGDSLLEPFWPMGTGCARGFLAAFDTAWMIKGWAQGKEPLDLLSERESIYRLLPQTTAENISKNFEQYTIDPATRYPNLNSSCVRPHQVRHLFISGEQDLSSLERSGQTRRSVSISRRESEVRPGRLLLWCQNQTQDYRGVNVTDLNTSWRSGLALCALIHRQRPELIDFDSLNEADCAKNNQLAFDVAEREFGIQPVTTGKEMDAERGPDKLIMVLYLSKFYEMFHKSTQSVTGLPKEIDANNGDCSSKTANSLYNSINHARKRIPKLDKKLEESDVNRKRKKASSHHEELMSCQTAPPAGEREEQKENKVRSMATQLLARFEENAPSCALRRQSDSESDSDADRPVSLDLTENPRFARPKIEPTHPSTTPDKAKWQPSPYLRLLESNTRSETLHTEHYVESQSSHRLTEIQSECQYSSVSSAYKSSERRPRSPLIPFTPTLSPMMHCLQQLEEQVIQQRKREPLNRKSIKERAQKLSSLFTGNPAQPQTDESSPAVSPSSPPQTIPESSTLSCLLSPAPSLTHKQCSEASETHLKADKHTEIRRVERLDPSKQRTVGKVSSAIGVKAATLAILYETDHRPNNPITLSLTEARRCAESGLVSVRKEFSASLGGSDTCVFCQKRVYIMERLSAEGFFFHRECFRCHICGCSLRLGAHTFDSQQGTFYCKMHFSQRKTSTRHRRGEIQDGGIRSSSITISNHTSTDGTRGQPSGGEFDSSTQQDLQTLPDSKEIISVSEVKDSSKKADPADSAPACPDSPLQKVKRSTAKGEITNKNILWKKKIRSTLPLVLMKKFHRGKPEDKTEVLAEEDGNSDFEEIHESLSSKKPSNPSTDSNCLPTKDNSSTPLDEIPKIPLYRTHVLPEYPKPSSSSPEPIVTSISSDPISFSPKKKLTLSLSEKEKLLNWDLTNPGKSGAEEQQQQHVKPSISLQHDHPEPTHPQPEPAPPLFGFQQWANNLRKSFSKGSNPVVLRRNRPMKARPLSEGSFNVGAVFQDEERCGSLVDEGEARPRTESEIASLLEQVALGSKTSRGTKDDMASLPPRKLNFFSSLRIKRVEGAEQSRGEGQKDILSILSRFRNKASAQQQQQQKSNSSSEDEQEPKLTHSGALQKKKEKIAIRQTKSDELKRLHRAQVIQRQLEEVEEKQRSLEEKGVALEKVLRGENGDDGSTDEAALLQTWFKLVLEKNKLSRYESELMIFAQELELEDTQSRLQQDLRRRMATEDCEKSASELVEEQNILVEIMKVVEKRDKLVSLLEEQRLKEKAEDRDLESLILSRGYQFHWT", "length": 1679 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "F1RXL1-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100152495", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MFTICNDSHSDFILLGFSDKPYLEKILFWVVLIFYCLTIIGNLVIILVSLKDPKLHIPMYYFLSNLSLLDLCFTSSCVPQMLVNFGGPEKTISYIGCAIQLYVFLWLGATECVLLVVMAVDRYVAVCHPLQYTTIMHPKLCLELAILAWGTGLIQSLTQSPATLQLPFCSNRRLYDIVCEVPALIQVSSADTIYNEIQMSIASIILLVVPLVIILSSYGAITKALLRVKSTEGQKKAFGTCTSHLLVVFLFYGTVTAVYLQPKSHYAHEQGKFLTLFYTVITPTLNPLIYTLRNKEVKGALIRLGKKTWDDLCWTIA", "length": 317 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "F1RYD0-1", "protein_name": "Transcription elongation factor A like 3", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MRQVKHLRSGSLPTPGLSVTSPSPTARPATPRTACLFPALCKTRKGEGTCPESLQDKKRRKNLNMEKLCKENEGKPESEGKPEDEVEPDNEGKSDEEEKPEVEGKSAHEGKLQNEGQPEDEGKPEDEGKQEKQGKSEDEGKPPGEGTMESQAKPESEPRAAEKRPAEDYVPRKAKRKTDRVTDDSPKDYEEDLQERHLGSEEMMREGGDLSRAQEELRKRQKMGGFHWMQRDVQDPFTPRGPRGVRGMRGGGRSQRGLHDIPYL", "length": 264 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "F1RYD7-1", "protein_name": "Olfactory receptor", "gene_name": "LOC110258723", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "LLVVVLVTYLLTLVGNTVIILIASIDPNLKTPMYFFLTHLSLVDICLTTSIVPQLLWNLRGPAKTITTLGCAVQLYVSLALGSTECVLLAVMAFDRHAAICKPLHYAAVMNPRLCQALAGVAWLSGVGNALIQSTVTLWLPRCGHRRLHHFFCEVPSMIKLACVDIHTNEVQLFIASLVLLLLPLALILTSYGHIVKAVTRIKSVQAWRKALGTCGSHVMVVSLFYGTITAVYIQPNSSYAHTSGKFISLIYTVLTPTLNPLIYTLRNKDVKGAMRRLFRRDLGS", "length": 285 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "F1S4M2-1", "protein_name": "Small ribosomal subunit protein uS13", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MSLVILEKFQHILRVLNTTIDGWQKIAFATTAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVEHVITIMQNPGQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLHEDVERLKKIRAHRGLRHFWGLRVGGQHTKTTGRRGHTVGVSKKK", "length": 152 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "F1S6C0-1", "protein_name": "RING-type domain-containing protein", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MGNCLTPHTSEDLLVPASATHLGGRRRRARSRERRPRDQVPGWAPAAPLVQEEQVRVPQRISQIQCLPKGVYKRDGSQEKMEQEECAICTLDFVCGDPIRSLPCKHFYHLGCIDEWLTRSFTCPYCRGPADGPQPSSRDTP", "length": 141 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "F1S7I2-1", "protein_name": "Beta-defensin", "gene_name": "DEFB125", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MNLLLTFMICGLLTLVTKAGWNVERCWSYNIGHCRRRCLHLERYKHLCMNKRACCIPLSSDDPYTQWPLPPEDQTVGMKTPYFRPVSPGSELDDQITITITVDQESTGTEQDIEGTAISFQASTPIPENIEDTKFSDKANTLNLHKL", "length": 147 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "F1S7N4-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100152708", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MDQTNSSVVTEFVLVGLTQSLGMQFLLFLLFSTFYVGIILGNLFIVFTVISDSHLHSPMYILLANLSLIDLGLSSTTVPRMISDLFSDCKTISFHNCMIQMFFIHVTGGVEMVLLIAIAYDRYTAICKPLHYLTIMNPQMCMLLVVAAWITGVTHAVFQFAFVINLPFCGPNNVGSFYCDFPRVIKLACIDNYGLEFVVTANSGFLSTGTFFLLVVSYIFILVTVRQHSSKDLSKAFFTLSTHITVVFLFFLPCMFLYVWPFPTKSLDTFLAIVDFAVTPVLNPAIYTLRNRDMKVEMRRLSRQVISSREMT", "length": 312 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "F1SBB9-1", "protein_name": "DNA-directed RNA polymerase RBP11-like dimerisation domain-containing protein", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MHALPAFESFLLFKDEKITIHKDTKAPNACLFTIDKEDHTLGNVIKSQLLKDPQVLFAGCQVPHPWEHKIIVPVQTTPDYTPQEALLNVITDLISKLSLLEERLRVAIKDKQEGIECWTGRGPAWPGPALTLALLQAPCG", "length": 140 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "F1SBV4-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100154723", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MESENITVVTEFIFVGLTQSRNIQLLVFVLVFIFYLIILPGNFLIILTIRSDPGLTAPLYFFLGNLAFLDASYSFIVAPRMLVDFLSEKKVISYRGCITQLFFLHFLGGGEMLLLVVMALDRYIAICRPLHYSTVMNPRACYALSLAQWLGGFVHSIIQVALILHLPFCGPNRLDNFFCDVPQVIKLACTDTFVVELLMVFNSGLLTLICFLGLLASYAVILCRVRGSSSEGKTKAMSTCTTHIIVIFLMFGPGIFIYTRPFRAFPADKVVSLFHTVIFPLLNPVIYTLRNQEVKTSLKKLLINN", "length": 305 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "F1SJ79-1", "protein_name": "Olfactory receptor", "gene_name": "LOC110259717", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MEQNNGTKGTEFILLGFAGQHKSWPVLFIVFLVTYVVTLVGNIGMILLIKIEASLHTPMYFFLQNLEEKVDLCYATAITPKMLQNFVWTEHSISFIGCMVQLLTYGAFATSDCYILAAMAVDRYVAICNPLRYPTVMSQRVCIQLVIGSYFMGFLNASVNTSFTFQLNFCKSNKINHFFCDAPPILALSCSSIYFSIMLLAAFVGFNLTCTVSVVIFSYVFILAAILKISSAAGRKKAFSTCASHLTAVTLFYGTLSYMYLHHRTLESQEQEKLASVFYGIVIPMFNPLIYSLRNQDVREALKGVGKQCF", "length": 310 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "F1SLL7-1", "protein_name": "Olfactory receptor", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MRRENQSSISKFLLLGLPIQPEHQGMFFVLFLVMYLTTVLGNLLIILLIRLDPRLHTPMYFFLSHLALTDVSFSSVTVPKMLMNMQTQDQSIPYAGCVTQTYFFIFLACIDNLLLAVMAYDRYVAICHPLHYAIIMREELCLCLLVLSWLLSCAYALTHTLLLAQLSFCADIIPHFFCDLDALLKLSCSDTSLSELVTFTAGAAVVIFPFIGILVSYGHIGLSILRVPSTKGICKALSTCGSHLSVVSLFYRTSMAVYLSSSGQFHDKDIIVSVMYTVVTPMLNPFIYSLRNRDMTLALGILFRNINIFSK", "length": 311 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "F1SMZ6-1", "protein_name": "10 kDa heat shock protein, mitochondrial", "gene_name": "HSPE1", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MAGQAFRKFLPLFDRVLVERSAAETVTKGGIMLPEKSQGKVLQATVVAVGSGSKGKGGEIQPVSVKVGDKVLLPEYGGTRVVLDDKDYFLFRDGDILGKYVD", "length": 102 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "F1SRB7-1", "protein_name": "Large ribosomal subunit protein eL31", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MAVVQKSGEKKRGRSAINEVVTREHTTSIHKRIHGVGSKKRAPRALKEIRKFAMTEMGTPDVRNDTRLNKAVWAKGIRNVPRRICAPLSRKRNEDEDSPNKLYPLVTCVPVTTFKNLQTVNEDEN", "length": 125 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "F1SUB9-1", "protein_name": "Multifunctional fusion protein", "gene_name": "IL1B", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MATVPEPAKEVMANNGDNNNDLLFEADGPKEMKCRTQNLDLSPLGDGSIQLQISHQLCNESSRPMVSVIVAKEKPMNPSSQVVCDDDPKSIFSSVFEEEPIVLEKHANGFLCDATPVQSVDCKLQDKDEKALVLAGPHELKALHLLTGDLKREVVFCMSFVQGDDSDDKIPVTLGIKGKNLYLSCVMKDDTPTLQLEDVDPKSYPKRDMEKRFVFYKTEIKNRVEFESALYPNWYISTSQAEQKPVFLGNSKGRQDITDFTMEVLSP", "length": 267 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "F2Z5L2-1", "protein_name": "Histone H2A", "gene_name": "H2AC18", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYMAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKKTESHHKAKGK", "length": 130 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "F4IWB9-1", "protein_name": "Cytochrome P450, family 705, subfamily A, polypeptide 28", "gene_name": "CYP705A28", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MIMGRSCSEKNGEAERVRGLVIESLALSPKIFLGMIFHKPLKKLGISLFQKDIKSVSPKFDELLEKFLVEHEEKMEEDHYKANDMMDLLLEAMEMRMQNVNLCIKRVSNTKARKPPILFRYGKYSNNSLLLQELLVAGTDTSALATQWTMAELINNPTILERLREEIESVVGNTRLIQETDLSNLPYLQSVVKEGLRLHPPASISVRMSQERCELGGFYIPEKTLLVVNTYAIMRDPNFWEDPEEFKPERFITSSRSEQEDEMREEVLKYIPFSAGRRGCPGSNLAYVSLGIAIGVMVQCFDWRIKGEKVNMSETAGTIMLAMAQPLKCTPVPRTLNLLPSSLHIPSS", "length": 348 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4J311-1", "protein_name": "Zinc finger (C2H2 type) family protein", "gene_name": "", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MDLDGVELLLDLREMVSQSGFEKSTTCSGVIALRSNLQSKSSHKCKICGKSFECYQALGGHQRIHRPIKEKLSKQEFSEVYPRKSKLQKRPESSSSCYECKVCGKIFGCYRGLGGHTKLHRSTKRELASTQDENSLLDSSEAKKIVSQPSSFKVSQEEKFLHCVELKQDFSEPLSHSGALPSTLRSKLQTKTQWKSSCHCKICGKSFVCSQGLGNHKRVHREISGKLACKRKYTEDYNPFSDSLKAKKIVKKPSSFEVSQEEKILHCVELKQDFGELLAHSGFDKSISCSKSIKVKKVARKNEKTEDSTSLFGVFVGEMSQRLHGCKTCGRKFGTLKGVYGHQRMHSGNHNRIEDENGLERIWGLKKKSRVCSVSAFDRFKGSSFMAEIEKHEVIEAALNLVMLCQGVYDFASISNLPLGDGFMDLELKPCPLRRKLQKKSRSSYKCSICEKSFVCSQALGSHQRLHRWKLVPKPEYIEDDSSLLDSSEAKKIVSKPSSFEHAQEEKILQCVEPKLEFHEQLAHSGFDKFDTCSKIRFSALPSPPEAKKIVSQPPSFEVSVDEKILYRAEPKLNFSEPLAHSCFDNSSSYRSIICGKSFVCSQALGGHQTLHRSIKGQLAGTEDGNSLSVTDSEASKIVAQPSSYKSQGI", "length": 650 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4JLV4-1", "protein_name": "Protease inhibitor/seed storage/lipid transfer protein (LTP) family protein", "gene_name": "DHYPRP1", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MASTTIILFLSFSIIPLLTIVRADNHSVYCPPPPPCICICNPGPPPPQPDPQPPTPPTFQPAPPANDQPPPPPQSTSPPPVATTPPALPPKPLPPPLSPPQTTPPPPPAITPPPPPAITPPLSPPPPAITPPPPLATTPPALPPKPLPPPLSPPQTTPPPPPAITPPLSPPLVGICSKNDTELKICAGILAISDGLLTTGRAEPCCSIIRNVSDLDAVTCFCKSVGAPRFSLSPNFGIFFKVCGRRIPQGFSCPGPSPTISPPPLPPQTLKPPPPQTTPPPPPAITPPLSPPLVGICSKNDTELKICAGILAISDGLLTTGRAEPCCSIVRNVSDLDAVTCFCKSVGARRFSLSPNFGIFFKVCGRRIPQGFSCP", "length": 375 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4K5R6-1", "protein_name": "Cell division cycle 20.6, cofactor of APC complex", "gene_name": "CDC20-6", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MMKSIALALCLTHHSPMVLSIVDYGDSQEKTIDSLWKKPHGSDLTWSGFSRVGVTEAYFAVPVDHFLTNPPSLRLSQTIYCRRGSSYVETEKVEEEDRDDFLKQVWFLTDNLVFFFVDIEEYIVIEQLGDTVYLWDASSCYTSKLVTIDDENGPVTSINWTQDGLDLAVGLDNSEVQVWDCVSNRHVRTLRGGHESRVGSLAWNNHILTTGGMDGKIVNNDVRIRSSIIGTYVGHTEEVCGLKWSESGKKLASGGNDNVVHIWDRSLASSNPTRQWLHRFEEHTAAVRALAWCPFQASLLATGGGVGDGKINFWNTHTGACLNSVETGSQVCSLLWSKSERELLSAHGFTQNQLTLWKYPSMVKMAELNGHTSRVLFMAQSPDGCTVASAAGDETLRLWNVFGEPPKTTKKAASKKYTEPFAHVNHIR", "length": 428 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F5H284-1", "protein_name": "Peptidyl-prolyl cis-trans isomerase A-like 4D", "gene_name": "PPIAL4D", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MVNSVVFFEITRDGKPLGRISIKLFADKIPKTAENFRALSTGEKGFRYKGSCFHRIIPGFMCQGGDFTRPNGTGDKSIYGEKFDDENLIRKHTGSGILSMANAGPNTNGSQFFICAAKTEWLDGKHVAFGKVKERVNIVEATEHFGYRNSKTSKKITIADCGQF", "length": 164 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "F6R3J9-1", "protein_name": "Spermatogenesis associated glutamate (E)-rich protein 1G", "gene_name": "Speer1g", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MWRARRHTSSTAPDLSKKEFKKEKERLTTELHLLIQLRNEQRDHLIDFKESSNYNRTKPTQKKNPFYEQLRSTKNQVLSSVHKLEMGIIEAQENIQELNKWIDYFTNLHSQLLMEKNLKMSITQNKKNKEVEIDWALIEKYLVDLNLNGQTGADQQP", "length": 157 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "F6X687-1", "protein_name": "Spermatogenesis associated glutamate (E)-rich protein 1A", "gene_name": "Speer1a", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MWRARRHTSSTAPDLSKKEFKKEKERLTTELHLLIQLRNEQRDHLIDFKQSSNYNRTKPTQKKNPFYEQLRSTKNQVLSSVHKLEMGIIEAQENIQELNKWIDYFTNLHSQLLMEKNLKMPVTQNQKNKEVEIDWALIEKYLVDLNLNGRTGADQQP", "length": 157 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "F6YNI8-1", "protein_name": "Eukaryotic translation initiation factor 4C", "gene_name": "Eif1ad19", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MPKNKGKGGKNRCRGKNENESEKRELVFKEYGQEYAQVTKMLGCGRLEAMCFDGVRRLCHIRGKLRKKVWINTSDIILVGLQDYQDNKADVILKYNLDEARSLKAYGELQEHAKINETDTFGPGDDDEIVFDDTGDDDEDIDDI", "length": 144 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "F7AMQ8-1", "protein_name": "Exocrine gland secreted peptide 8", "gene_name": "Esp8", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEKVSAMTSFPVMLFLIILLLPSICSEERTQADPTISADNKKNFKTVVDLTDCQCERNFIESLESTLPASNQDQTLFENMTNQHKLNLSKMLSVLSKCCTQKQQVDTVHFRRMPHRIQSTKQNNYKKQVLYPMQEFMNLTRDVLVSRYV", "length": 149 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "F7C9P2-1", "protein_name": "F-box and WD-40 domain protein 25", "gene_name": "Fbxw25", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEIHLPSLPMLKILSYLDAYNLLQAAQVNKNWNALASSDVLWRKLCQRRWHYCDMVTLQLQGKETWKQFFIYRIWQEHAKTRAKPEDFTYKEIPVECGFYGYACYISGHGLTRNGQGKSVICMVSSKNTISTWDIHKSVITWVSPVQPASINLLTTLPDMHIAVTVDIQSTIKLWDCHNREALATNNLESPCKSLKAVISKDGPIVLVGDTLGNLYIFRIPDLHLISTVNVFPYGFDEIDCSPQKKWVLLSKNYPHILPKVFYMSSLLRTSEFSAPVSTILEFSLCQGAFWTPRREDRITLMSRSGFPQITKFETFDMKLEGIGNKVAVQGKLIASFFLPYYEESPNWIGVSDKDVIVCSTHFFLLLFTINGLHLQTFQYCPETIVRLCVDPVHVIVTCNNGSLDVYAWEERSLLLRKCYRLQNKRPLPLYGFINNLLCDDVSIVQLMRDGHGPYSLIAYALNICS", "length": 466 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "F7ELE5-1", "protein_name": "NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial", "gene_name": "Ndufs7", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "RRTVVYTARARSQEKSGSEPLSLWFRFPLVSIWALDQNRNSLEDGPQRLSEGRGQDGGAGGSWLALCTDPGSAHRHSGSAAQSPPECGSHWEPEQSAVSKAGAGAVVPKPSHLPRSRAEYVVTKLDDLINWARRSSLWPMTFGLACCAVEMMHMAAPRYDMDRFGVVFRASPRQADVMIVAGTLTNKMAPALRKVYDQMPEPRYVVSMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGILQLQRKIKREQKLKIWYRR", "length": 271 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "F7F947-1", "protein_name": "Beta-defensin-like domain-containing protein", "gene_name": "Spag11b", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MDLSQRPPNVFRHVVDFLKKNQTHITQACSGNSGGRKASSSDLCGCALCLEAPSPHSQLSYKRACSSCPPTRGSSVPAVPSTAMKQRLLPSFVNLLLAALLLPGKAETWLRSWTQALSAVVTLGSSSASSINHLVTEPPSSPQDEFPAQGGNGSGLLHHRVKRFPPRTPPYHEPGPNYQIVNCKKNEGFCQKYCNFMETQVGYCSKKKEACCLHPF", "length": 216 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "F7FNC4-1", "protein_name": "Interleukin 36, gamma", "gene_name": "Il36g", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSSKYPHSPCTASGKETPDLGQVSDVDQQVWIFRDQALVTVPRSHTVTPVTVTVLPCKYPESLEQGKGTPIYLGIQNPDKCLFCKEVNGHPTLLLKEEKILNLYHHPEPMKPFLFYHTLTGATSTFESVVFPGSFIASSKIGKPIFLTSKKGEHYNIHFSLDII", "length": 164 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "F8VPX6-1", "protein_name": "Spermatogenesis associated glutamate (E)-rich protein 4A1", "gene_name": "Speer4a1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MALFARLCRLFQRANVNGRETREGRKDANLPPESNEGRRRWTWRMWMAHRQTTSSVPVTSKKQFEKEEKELIKKIQLTTKETNELRDRLIYVTEGSMNKRPYHRQTRHYKELKLKEKEIMTYLHNLEMENMEARENKQEFKKEKNFYRNLHTRILLEENLIKKKLAILQQESKEIHADWAIIQERLVELNLSCKDEQEKTSNLETQENQVSEAARELGLATAEEDSILQNELPCQEAPAEHHTQNPPSSSDESSSDESSYSTCPAWE", "length": 267 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "F8VQM2-1", "protein_name": "C-C motif chemokine ligand 26", "gene_name": "Ccl26", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFFDLGLLVLLAIFLSVQLGVATCGSSIAMSCCPNFSYYVIPWSWVYSYKFTDKSCTSDGVIFFTKTGKQFCVQPGAKWVQRFISLVNTRNHL", "length": 93 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "G3GSG1-1", "protein_name": "Ferritin", "gene_name": "LOC100767129", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MGFLRKSHRRQRHRCPLRVSRATVAYPLVFMTPPIISPPSQVRQNYHFDCKTAVNNHVQLQLHNSSVYLAMAFYFDSEDVAQKNLASFFLNKSHECTAQAEMFLELQNQRGGRISLGSIREADRNNWLGGLQAMECALQLELSTNQSLVALHQLASSKSDAHLCSFLKNHFLTKQVEVLKEISGYVTKLRQMGSPDDGIAEYLFGKLTLDDNKGK", "length": 215 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3GWA3-1", "protein_name": "60S ribosomal protein L18a", "gene_name": "LOC100764432", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MKASGTLREYKVVGRCLLTPKCHTPPLYLMRIFALNHVVAKSRFWSQLKKMKSSGEIVHCGEVRPEVPLQVKNFAIWLHYDSRNGTYNMCREYWDLTVTQCYRDMGAQHCARTHCIHIMKVEEIASGKCQRPAVKQFHDSKIKFLLPHRVLRCQHKPHFTTKRLNTFF", "length": 168 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3H156-1", "protein_name": "Prefoldin subunit 4", "gene_name": "LOC100773780", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MVATMKKAAAEDVNVTFEDQQKINKFARDTSRITEQKEIEVKKNHLQNLEDTFNDIMLADGDCFMTQYLIRDVLISHSQEEAQEMLEEAKKTLQEEIDALESRVGAIQWVLANLKVQLYTKFGSNINLGVDES", "length": 133 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3H2T6-1", "protein_name": "Histone H4", "gene_name": "LOC100757199", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG", "length": 103 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3H8X2-1", "protein_name": "1-acyl-sn-glycerol-3-phosphate acyltransferase gamma", "gene_name": "Agpat3", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MGLLAYLKTQFVVHLLIGFVFVVSGLVINFTQLCTLALWPISKQLYRRINCRLAYSLWSQLVMLLEWWSCTECTLFTDQATVDHFGKEHAVIILNHNFEIDFLCGWTMCERFGVLGSSKVLAKRELLCVPLIGWTWYFLEIVFCKRKWEEDRDIVKEGLQCLSDYPEYMWFLLYCEGTRFTETKHRISMEVAASKGLPPLKYHLLPRTKGFTTTVQCLRGTVAAIYDVTLNFRGSKNPSLLGILYGKKYEADMCVRRFPLEDIPADENDAAQWLHKLYQEKDALQEMYKQKGVFPGEPIKPARRPWTLLNFLCWATILLSPLISFVLGVFASGSPLLILTFLGFVGAASFGVRRLIGVTEIEKGSSYGNQELKKKE", "length": 376 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3HAB3-1", "protein_name": "40S ribosomal protein S15", "gene_name": "LOC100759804", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MAEVEQKKKRTFRKFTYCGVDLDQLLDMSCEQLMQLCSTRQRLLLNCSLWRKQHSLLKSLRKAKKKVPPMEKPEVGKTHLRDMIILPEMAGSMVDVYNGKTFNQVEIKPKMIGHYLGEFSITYKPVKHGGPGVGATHSSRFIPLK", "length": 145 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3HDI6-1", "protein_name": "Lipid transferase CIDEB", "gene_name": "Cideb", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MEYLSALNPNGLLRSVSTMGSELGRRVWNSGPPPQRPFRVCDHKRTVRKGLTAATRQELLDKVLETLLLSGVLTLVLEEDGTAVESEDFFQMLEDDTCLMALERGQSWSPRSGMLSYGLGREKPKHSQDIARITFDVYKQNPRDLFGSLNVKATFYGLYSMSCDFQGVGPKKVLRELLRWTSSLLQGLGHMLLGISSTLRHVVEGAERWQWHKQNHLRS", "length": 219 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3HDS5-1", "protein_name": "Histone H3", "gene_name": "LOC100773314", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA", "length": 136 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3HGI3-1", "protein_name": "PHD finger protein 6", "gene_name": "Phf6", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MSSSIEQKKGSTRQRKCGFCKSNRDKECGQLLVSENQKVAAHHKCMLFSSALVSSHSDNESLGGFSIEDVQKEIKRGTKLMCSLCHCPGATIGCDVKTCHRTYHYHCALHDKAQIREKPSQGIYMVYCRKHKKTAHNSEADLEETFNEHELEPSSPKTKKKSRKGRPRKTNFKGLTEDSRSTSSHGTDEMESSSYRDRSPHRSSPNDTRPKCGFCHVGEEETEARGKLHIFNAKKAAAHYKCMLFSSGTVQLTTTSRAEFGDFDIKTVLQEIKRGKRMKCTLCSQPGATIGCEIKACVKTYHYHCGVQDKAKYIENMSRGIYKLYCKNHSGNDERDEEDEERESKSRGRLAIDQQLTQQQLNGN", "length": 364 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3HJW3-1", "protein_name": "Calcium homeostasis modulator protein 6-like", "gene_name": "LOC100774768", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MEKFKAVLDLQSKHRSALGYGLVTLLTAGGEKIFSEVVFQCPCSATWNLPYGLVFLLVPALALFLLGYALRTRTWRLLTGCCSWSASAQSSSGLQRVFVCAQISAAAALPPLTWVAVALLGGSFYQCAVSGSEAMARHLCKGRDPSCAAKLPQVPCKKQEAEMQDILSQLKAQSQVLGWILIAAIIILLLVVKSVTRCLSPVSYLQLKFWEIYLEKERQILQGEAMEHATQLAKENVRCFFDCTNPKDCSTPSSKAWQQISALYTFNPKNHFYSMLHKYVNRKDMSGSLRSVEGDAVVPVLGFVDASGMATTHGV", "length": 315 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3HQ40-1", "protein_name": "Eukaryotic peptide chain release factor GTP-binding subunit ERF3B", "gene_name": "LOC100767578", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MDLGSSSDSAPDCWDQVDMEVPGSAPSGDGFTSASTAAAEAAEAEAQRQHLSMAFSSQLNIHAKPFVPRVSAAEFVQSFLPGSAQPPAPTTSSSDETCTGAGDPQGKRLGWGAPVEPSKDGPLMSWEGSNSAVTMELSEPVVENGEVEMALEESWELKEVSEAKPGGSLGDSGPPEESGKEMMEEKEVIRKSKSMAIPSGAPKKEHVNVVFIGHVDAGKSTIGGQIMFLTGMVDRRTLEKYEREAKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETEKKHFTILDAPGHKSFVPNMIGGASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKYLIVLINKMDDPTVDWSSERYEECKEKLVPFLKKVGFSPKKDIHFMPCSGLTGANIKEQSDFCPWYTGLPFIPYLDSLPNFNRSIDGPIRLPIVDKYKDMGTVVLGKLESGSIFKGQQLVMMPNKHNVEVLGIVSDDAETDFVAPGENLKIRLKGIEEEEILPGFILCEPSNLCHSGRTFDVQIVIIEHKSIICPGYNAVLHIHTCIEEVEITALISLVDKKSGEKSKTRPRFVKQDQVCIARLRTAGTICLETFKDFPQMGRFTLRDEGKTIAIGKVLKLVPEKD", "length": 631 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3HQN5-1", "protein_name": "Transcription factor 19 isoform X1", "gene_name": "Tcf19", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MLPCFQLLRIGGGRGGDLYTFHPPSRSGCTYRLGCRADLCDVALRPQQEPGLISGVHALLHAELQGDDWRVSLEDHSSQGTLVNNVRLPRGHRLELSDGDLLTFGPEGQAGTSSSEFYFMFQQVRVKPQDFAAITVPRSRGEAGTGFQPMVPSQGAPQRPLSTLSSAPKATLILNSIGSLSKLQPQPLTFSRGGGRPQSLAVPTQPGEVGASPPAPPTRNRRKSVHRVLAELDDENETSLSPLSVLMEPRKKLRLEKAALVSSGRD", "length": 266 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3HWQ5-1", "protein_name": "Zinc finger protein 219", "gene_name": "Znf219", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MEGSRPRILVGHLEPSPPAFDGELDLQHYSNGPGVSTGSPGMGAVGWSETRAGERRFPCPVCGKRFRFNSILALHLRAHPGAQAFQCPHCGHRAAQRALLRSHLRTHQPERPRSPAARLLLELEERALLREAQLGRARSSGGMQATPATEGLARPQVPSSSAFPCPFCKGKFRTSAERERHLHILHRPWKCSLCSFGSSQEEELLHHSLTAHGASERPLAATSTPEPQPPPQPEPRSALEPEPEPEPRPEPEHEANPAPTPAPPEEPPAPPEFRCQVCGQSFTQSWFLKGHMRKHKASFDHACPVCGRCFKEPWFLKNHMKVHTSKLGPLRAPGPGSTPARAPQPPDMSLLAYEPLGPALLLAPAPTPAERREPPSLLGYLSVRAGEVRPNGEGADPGAGRSYGGGFRPLPSALPNRARRHRTEEPEEEEEVVEAEEESWARGRSLGTLTSLHPHPGEGSGQSAPAVGAQARPTGTQEENGLLVGGARSEAGRGATGKDCPFCGKSFRSAHHLKVHLRVHTGERPYKCPHCDYAGTQSGSLKYHLQRHHREQRSSAGPGPPPEPPPPSPRGAASLQPQSGAKPTQASATWVEGTASTRPSSSGTGAGSRRKPASPGRTLRNGRGGEAEPLDLSLRAGPGGEAGSGGALHRCLFCPFATGAPELMALHLQVHHSRRARGRRQPRADTSPPYVRAPSGETPPSPPLEEEGSPGLSRSGEAGLGGQER", "length": 725 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3I071-1", "protein_name": "Large ribosomal subunit protein uL29", "gene_name": "LOC100753244", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MAKIKARDLRGKKEELLKQLDDLKVELSQLRVAKVTGSAASKLSKIRVVQKSIVRVLTVINQTQKENLRKFYKGKKYKPLDLRPKKTRAMHRQLTKHEEKLKTKKQQRKERLYPLRKYAFKA", "length": 122 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3I1Z3-1", "protein_name": "DNA damage-inducible transcript 4 protein", "gene_name": "Ddit4", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MPSLWDRFSSSSSSSSSSSSGTPATDRPPRSAWGSAAREEGLDRCASLESSDCESLDSSNSGFGPEEDSSYLDGVSLPDFELLSDPEDEHLCANLMQLLQESLSQARLGSRRPARLLMPSQLVSQVGKELLRLAYSEPCGLRGALLDVCVEQGKSCHSVAQLALDPSLVPTFQLTLVLRLDSRLWPKIQGLLSSANSSLVPGYSQSLTLSTGFRVIKKKLYSSEQLLIEEC", "length": 231 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3IAH8-1", "protein_name": "Guanine nucleotide-binding protein subunit gamma", "gene_name": "LOC100755128", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MASNNTASIAQARKLVEQLKMEANIDRIKLSKAAADLMACCAAHAKEDPLLTPVPASENPFREKSFCTIL", "length": 70 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3IG76-1", "protein_name": "Olfactory receptor 7E24 isoform X2", "gene_name": "LOC100765597", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MYILALFGNLLIILTVSSDSHLHTPMYFFLSNLSMIDIGYISTTVPRVIVDIQTHCPVISYVGCLTQMSLIIIFACMDDMLLSVMAYDRFVAICHPLYYQVIMNPSSCGVLLLGSFLLSLVNLLLHYVAVLSFSNCEDIFEISNFFCGPSELFKLACFDTFTTNIVRYCAGALFGLLPISGIIFSYFKIVSSIMRSSSSSNGKWKTFSTCGSHLSIVCLFYGTALGMYFSSSLSLSPKTNAVASVMYTVVTPMLNPFIYSLRNKDIKTALRKILSRTF", "length": 278 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3IGD7-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100770882", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MSGANSSSLTPEFFVLNGIPGLEDAHVWISLPFCFMYMIAVVGNCGLMYLIGHEEALHRPMYYFLTLLSFTDITLCTTTVPNTLCIFWFNLKKIGFKACLAQMFFVHTFTATESGMLMLMALDRYVAICYPLRYGTILTNPVIAKASLATFLRSVAFILPFTFLTKRLPYCRGNTIPHAYCDHMSVAKISCGNVKVNAIYGLLVALVVCAFDIFCITVSYTMILRAVMNLSSADARHKAFSTCTSHICAIVITYVPAFFNFFTHRFGGHTIPHHIHIIVANLYLLLPATMNPIVYGVKTKQIRESVIKFFSGDKSGITEIKGLQNK", "length": 326 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3INQ1-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100763177", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MFCNTSTPGHSTFLLTGFPGLEASHHWVSIPINLICVVSILGNSIILFLIRTDPALHEPMYIFLSMLAASDLGLCASTFPTMVRLFWLGIRELPFDLCAAQMFFIHAFTYVESGVLLAMAFDRFIAIRDPLHYATILPHSAVAKVGAAVLIRAILLNLPGPILLRRLLFPQVSVLSHCYCLHCDLVGLACSDTRINSLVGLVSILLSLGLDSSLIMLSYVLILRTVLSIASPGERLKALNTCVSHLCIVLIFYLPKLGLSVLHRVEKHSYPALAVLMANLHFLVPPFMNPVVYCIKSKQIRQGFLKRFQQKRVDVS", "length": 316 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3MYE2-1", "protein_name": "Large ribosomal subunit protein uL18", "gene_name": "", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MGFVKVVKNKAYFKRYQVKFRRRQEGKTDYYARKRLVIQDKNKYNTPKYRMIICVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAVAYCTGLLLACRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGALTCYLDAGLARTTTGNKFFGALKGAVDGGLSIPHSTKQFPGYDSESKEFSAEVHRKHIMGQNVADYMRYLTEDEDAYKKQFSQYIKNNVTPDMEEMYKKAHAAIRENPVYEKKPKKEVKKKRWNRPKMSLGQENDRVAQKKASFLRAQERAAES", "length": 295 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "G3MZM9-1", "protein_name": "Uncharacterized protein", "gene_name": "LOC107131211", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MNLFIYVLLLSIWTSSCLDRNESNGSATAVTTRAEFKQTKLQELRRRLLIIVIGTLITGYMVTCTCLLHYRCDSKEAHKAAKDKKEDITIKASRSSKISFTDSKSPTAGLGDPERQSVVSRIDKSSGPSSPRKVPSSAEKLVRPSSQKKPSKPSAPKKVLGSPPQEKLHRTRSPKKAHRQAHAHKLVSQVSPSYPEKAIKPTWPPSLQCRVKPTKTPLPYPKNQSFPEHSSADKLTKRQRYLKLKCPASAGRAEILSRPQPVKFCRCYKEKCLVCRAVSEPFITHVSEANKKHVPVPLFSRELKHFYKSYKKKQPKYNTLYGNMSDSDITTYNSDGESDREVIIMCNIKCKEDIYKNSPNN", "length": 361 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "G3UW31-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r176", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLSQNKSVKTTVEVTLQILLLCQVGVGTVVNIFLFVHNLSPFLNGSQQRPIKVILANLALGNTLILLFAFPNNIRVFIPREFPTDLKCKLGYFIWLVARSTNMCSTCSLSTYQFVTLAPGTWGRVMLPGRAPNFLRYTCYSCWLFSVLNNAHIPMKVSGPQKTHNDSNSKSKWVCSTSGFSIGMRILSFAHDAVFISIIIWSSVSMVILLNRHHQRLQHIQSTNQKLRVHAETRASHTILLLVVTFVTCYLLDCICTVCNISFVDSRVWLRRVKEILSVSFPTFSPLLLIFRDPKDPCSLLFGC", "length": 304 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "G3UY92-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r158", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSAHGKSVKTTEEVALQLLLLCQFGVGTVAKVFLFVRNFSPVLTGSKQRPRQVILSHMAVANALTLFLTIFPNNMMAFAPKTPPTELKCKLESFSHLVARSTNLCSTCVLSFHQFVTLVPLNRGKGKLVLRASVTNMASYSSYSCWFFSVLSNIHIPIKVSGPQIKDNNTDSNRKLFCSTSGFSVGTVLLQFAYDATFMSIMVWASVSMVLLLHRHRQRMQHILTPNQDARGQAESRATRTILMLVVTFVSFYLLNFICIMLHALFMHSHFFVRLVSEILTAVFPSISPLLLIFRDPKDPCSVLFNC", "length": 307 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "G3V9M0-1", "protein_name": "Cystatin S like 1", "gene_name": "Cyssl1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MACLLYTQLFLLNTFILFLNLSLNPVLGQILAGIEKSIIEEEGALEALNFAVSEYNENNSDLYLSRVVEVKTVKTVQQQIEAGKTLLFDVILGKTACLKTQDDLSDCPLNEPTDLQEREFCSFEVHLPDWANAINLLSSICNRI", "length": 144 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "G3X693-1", "protein_name": "Ig-like domain-containing protein", "gene_name": "", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "RVFLPLLLLGVILPGGDNEDGPTSFHLIQISTFVNNTWAQNQGSGWLDDLQIHGWESDSGTAIFLKPWSKGNFSDDEVTELVDLFRAYFIGFTREVQDRVNEFQLEYPFVIQVTAGCELHSGEAIESSLRGALGGLDFVSIQNHSCVPAPDGSSRGQKFCALTTQYQGISDIIERLLSETCPRYLLGVLDAGKAELQRQVKPEAWLSSGPTPGPGRLLLVCHVSGFYPKPVRVMWMRGEQEQPGTQQGDLMPIGEAAGLNCRVKHSSLGDQDIILYWGHPTSIGLILVAIIVPSLILLICLAFGVLRFMGSHRIGHD", "length": 317 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "G3X9Q9-1", "protein_name": "Predicted gene 6526", "gene_name": "Gm6526", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFSWLRRLFHRENGDQGETRPRQKESAIPSCKKRRMKSFWGRHMSAGKKSSQNCNITNHMKNMNKLEDMKFYIRKINAKRLELFPILDIDMNTDLNYRMNIEFTIIKSQHEKTMLDMEKMTQSISDTIETYKEFIEDKDSYSFTHSYLLKECNQLKEKVRMLLNENRKLLVEQADQEASYGEEKRFCDESSKNIHPKC", "length": 198 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "G5E8X8-1", "protein_name": "Oocyte maturation, alpha", "gene_name": "Omt2a", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDTLVFTKVHLESWVYKGLRGQHDSILELLKENLHHYLCIEFDEGLNDTVVYIIGFKFFAMFAMFVIVSLACNLRTKRNRARAWARGLQSPVWWNRRYFI", "length": 100 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "H3BJ46-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r14", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSSLSFMSSLLENILYFQAGLGVLANIFLLVFYIFIILGHRPKPMDLISCQLTFVHIMMFLAGENFWLANIFESLNVENDFKCKATFYTKRVMRGLSICITCLLSVFQAVMISHRNSLLAKFKHKLKIYMINALFYIWTFNLSLSSNLIFYVGGFTNMSQTKQLKVTKSCSLIPMNYIIRGLILTVISSRDMFLVGVMLTTSTYMVIILCRHQRQCKHLHSTSHLRASPEKRATQTILLLVVFFVIMYWVDFIISSTSILLWMYDPVIMIVQKFVVNAYPAITPFVQISSDTRVIRVVKNWHS", "length": 303 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "H3BJ88-1", "protein_name": "Vomeronasal 2, receptor 3", "gene_name": "Vmn2r3", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKMAIRKKCLILELTVFLCVELYAQYEDQNMTCRLMRKFNLTGYVEAENHHFVIGGQFPVHYRTIPTSDSDEEPESPMCEGFNFRGFRWMKTMIHTIKEINERKDILPEHTLGYQIFDNCFSTTKAMESSMVFLTGQDEYKPKWRNSTGKYLIGIIGAGGSTMSLAGARILLLNDVVQVGYASSSSILTEYLNVYRTIPSDKFQTEAIVNLIRHFGWVWIGAIASDDDYGKHGVKSFRKILETNNLCIAFSETIPKVYSNEKMQIAIDAVKSSTAKVIVLYATDFDLSPFVLEVIHHNIAHRTWIATEAWITSALIAKPEYFPYFGGTIGFAIPRSVIPGLKEFLYDVHPSKDPNDVLTIEFWQTAFNCTWPNSSVPYNVDHRVNMTGKEDRLYDMSDHLCTGKEKLKDLKNTYLDTSQLRITNNVRQAVYLMAYGLDRLIRVLIKEYREYLLHPKILAFMSYKLFEYIRKVKFTTHDGRKIELNVHGDIENGYYDILNWQMDNTGDIAIVKVGEYKFTRSKYELVLPKNSTLFWNTESSRLPDSVCTKVCPPGTRKGFITGQPVCCFDCIPCEDGYVSEKPGQRLCNPCSEDDWSNAEKNKCVPKHVEFLAYEEALGFTLVILSIFGALVVLAVTVVYVIHRHTPLVKANDRELSFLIQISLVITVLSTMLFIGKPCNWSCMARQVTLALGFCLCLSSILGKTISLFFAYRISISKTQLISMHPSFRKLIVLLCVFGEIGVCASYLVLKPPSMFKNIERQNVKIIFECNEGSVEFLCSIFGFDVLLALLCFVTTFMARQLPDNYYEGKCITFGMLFFFIVWISFVPAYLSTKGKFKVAVEIFAILASSYGLLGCLFLPKCFIILLRPKRNTDETVGGRVPTVDRSIQLTSASVSSELNSTMVSTVLDE", "length": 909 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "H3BKT1-1", "protein_name": "piRNA-mediated silencing protein C19orf84 homolog", "gene_name": "Gm52993", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDELEDGALSNGDNLSLPSAGTESWPTSATPGLPPSLLSTLDPTHLGLPEQLASVTVPIRLDTLSYLLHSALLGTYNLQQSLPPCSCTAQPSHIWPDTVRRPPRRSGQARGGWEVRRRPSRGWGRGRGRGRVWAQSQRGPERAEERERNMAGEPGAGPSTPPVTPPSQDGQKEAGGLSEDWEADY", "length": 185 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "H3BLP0-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r25", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSSLTNILYFQAGLGILANTFLLCFYTFTILCHRSKPMDLTSCQLTLAHILFLLAGGDNWLAVILESLNIENDFKCKAIFYTNRVMRGFSICITCLLSVFQAVTISPHTSLLAKFKHKLKTYIIYAVFYIWFYNFLVCSHLLVYVGGFNNVSETNQMRVTESCSLFLMNYIISGLIFTVTTFRDVFLVGVMLITNAYIVIILFRHQRHCKHLHSIRHLRVSPEKRATQTILLLMVFFVVMYWVEIIISSTSLLLWMYDPGFLTVQKLIVTVYPTITPLVQISSDKRVINVLKNLQSKCQQIF", "length": 302 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "I3ITL1-1", "protein_name": "Gap junction protein", "gene_name": "gjc4a.2", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MSWDFLTHLLDEISNHSTFVGKIWLTLLIVFRIVLTVVGGETIYDDEQSEFVCNTLQPGCKNVCYDAFAPLSHVRFWVFQIIMISTPSVMYLGFAMHKIARMADNEYQPRKHKMLSTVHQRMNRDYDMVDEMTEEVPMIPEEIEPSEKDNKSAASTKTTAASDAAVKHDGRRRIKRDGLMKVYVLQLISRVAFEIAFLFGQCILYGFEVSPSYICTRSPCPHTVDCFVSRPTEKTIFLLIMYVVSVLCLALTVLEILHLGIGGLRDSFRSRANRRLPVHRPSTSTICHRLSSAPPGYQAVQKKYSSGKLKAEFLSDSGRESLADDNTTRDLDRLRRHLKIAQQHLDQAYHTEEVGASHNSGPDSKSIAAEQNRLNQAQGGFGSTEEKVFKEAHA", "length": 394 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "I3L8A5-1", "protein_name": "Olfactory receptor", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "FPSRQERTMRRENQSSISEFLLLGLPIPPEQQGVFFALFLGMYLTTMLGNLLIILLIRLDPRLHTPMYFFLSHLALTDISFSSVTVPKMLMNMQTQDQSIPYAGCVTQMYFFMFFACLDNFLLTSMAYDRYVAICHPLRYTSIMRGGLCTLLVTVSWILSCANALCHTLLLAQLSICAENTIPNFFCDLGALLKLSCSDTSFNDLAIFIAGVATIMLPLLCILVSYGHIGATILKIPSTKGICKALSTCGSHLSVVFLYYGTIIGLYLVPSSSTSSHKDIVASVMYTVVTPLLNPFIYTLRNRDMKGALEKLFHKAPVLS", "length": 320 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "I3L8Z8-1", "protein_name": "LRRC37A/B like protein 1 C-terminal domain-containing protein", "gene_name": "LOC100514982", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MMTLELEKLILPSHMACCLCQFKSNIEVVCKTVKLHCDRCLKNSTRCDKETSLGDVEGSFMKVLQARKKNTSTELMIEPERPSSDKSGVSLSSFMNEQLDFSDESDVISALNYILPYFSEGNLEDVESTLLPFIQLLFSNVAEADIPPGHLKTHTGNPPVNPESGTSGYTNKLRQLRFLENLLDAEIQEKIDEVMKKEKTAMLIYSNILSPKLRRQILRKKLETARTQAESLEEIESVDKRPLKVNRVLKGPRGIKKRHFRAMRRQSIRRKETAQPFVETTTKGSKLGGPSARELEQLWVVQRPRKRVADSLQKEPSFGREHKAEVSSFLKQYSRGRPAASIHPKAPATVKKTSEDLSDTLFVLVDANARVKNRKASETISYPRKIDSFHPSHSPVLHRTPEPQNRQAFRDKGSSYRLLLALRPLSSAVRSLINSPSQEASSPSGELTLQEQPSPESFSPSEPSTEHIISEKDTPQVVFEELPTSGTTTLSGPIPGPTAQGTLPTEYSATTADNVMPTGQHTSAIQWEHHNVGTDVASTPTSFISPGVSSPGSQFEAQLNQQLQSLIPNNDVRRLISHVIRTLKMDCSEPQVQLACAKLISRTGLLMKLLSEQQEAKASKAEWDTDQWKTENYINENTEAQGEQKESSELTKDVPGYGYNNKLILAISVAVVLMLLIVILCLIEVYSRRRTLREGKVGRRRGFFGFLLRKRRSGESESEGFFWRRRPLWLRDTYRPLSATRKKNMAEKLHDKESSDEEEIFHKGAGEVSEAPADVILTIESDVEDLGEETDTAPEGPPE", "length": 799 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "I3LBH4-1", "protein_name": "Large ribosomal subunit protein uL11", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MPPKFNPNEIKAMYLRCTSGEISAKSALAPKIGPLGLSPKEVGDDIAKAAGDWKGLRITVKPTIQNRQAQMEVVPSASALIIKAPKELPRDRKKQKNIKHSGNITFDEIVNIARQMRRCSLARELSGTIKEILGTAQSVGCNVNGRRPHDIIDDISSGAVECQAS", "length": 165 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "I3LC12-1", "protein_name": "Olfactory receptor", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MFGANLTIFHPTVFILLGMPGLEIYHTWLSIPFCLMSIVAVLGIGALILVVLSESTLHEPMHVFLSMLAGTDNLLSTTTVPKALAIFWFHAGEIAFDACITQMFFIHVAFVAELGILLAMAFDRYVAICALLRYTAVLTPSTIVKLTLAIWGWGIGTIFPIIFLLKRLPYCRTNIIPHSYCEHIGVARLACADITVNIWYGFSVPMASVLVDVAFIAVSYTLILQAVFRLPSQDAQHKALNTCGSHIGVILLFFIPSFFTFLTHRFGKNIPHHIHILLANLYVLIPPMLNPIIYGAKTKQIRDSLAHMLSRVGMS", "length": 315 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "I3LEQ2-1", "protein_name": "All-trans retinoic acid induced differentiation factor", "gene_name": "ATRAID", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MARPGFRSPSSLVPRAAALLLVLSVPRALALPEICIQCPGDVQNLSEVALYCKQTPELMLQGRCCLNGKGTILGLDLQNCSLKDPGPDFAQAHTAVIIDLQANPFEGDWANTFRGFTQLQTLILPQGVNCPGGINAWDVVTFYITNQTCQGQRTFATALGTQKRVLRMDLVLLMVLVSCSVFVLMASMATSVCARAHSHCSCSSVFWDPQHYPFPSCFGGLNAEKPRLHEPQRSSY", "length": 236 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "J3QM75-1", "protein_name": "Secretoglobin, family 2B, member 19", "gene_name": "Scgb2b19", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKGTLLLLGLLITGELSFQTTEACVPFFEGYASVVSGSRVWLYHELQSFDATAEEKVALEKIQGCYREERLRNILLEPKIMEAMVASPECRSYYSLNNFRSILDFISNLLGE", "length": 112 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "J3QMG8-1", "protein_name": "T cell receptor alpha variable 13N-3", "gene_name": "Trav13n-3", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKRLLCSLLGLLCTQVCWVKGQQVQQSPPASLVLQEGENAELQCTYSTTLNSMQWFYQRPGGRLVSLLYSPSWAEQRGGRLTSSAASNESRSSLHISSSQITDSGTYLCAME", "length": 112 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "J3QML3-1", "protein_name": "BTB domain containing 35, family member 29", "gene_name": "Btbd35f29", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGRTWCLHKVFLCQSGYFANILKGTWRESHQGVINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKKVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIIWDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYNEEQIVMKLDSDALTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "J3QMQ9-1", "protein_name": "Predicted gene, 20873", "gene_name": "Gm20873", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSSLMKKRRRESSSNTLRNIVGRRISHSWKEGNEPVTQWKAIVLDQLPTNPSLYLVKYDGIDSIYGLELYSDDRILNLKVLPPIVVFPQVRDAHLARALVGRAVQHKFEGKDGSEVNWRGVVLAQVPIMKDLFYITYKKDPGLYAYQLLDDYKEGNLHMIPDTPPAEERSGDDSDVLIGNWVEYTRKDGSKKFGKVVYQVLANLSVYFIKFHGDIHIYVYTMVPKILEVEKS", "length": 232 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "J3QMS5-1", "protein_name": "BTB domain containing 35, family member 2", "gene_name": "Btbd35f2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLSCRDSSLLEPQPEDIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKKVKISSNDAYQNLFLDGHDSDIKIRALGRTWCLHKVFLCQSGYFANILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "J3QMW5-1", "protein_name": "Eukaryotic translation initiation factor 4C", "gene_name": "Eif1ad17", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MPKNKGKGGKNRRRGKNENESEKRELVFKEYGQEYAQVTKMLGCGWLEAMCFDGVRRLCHIRGKLRKKVWINTSDIILIGLRDYQDNKADIILKYSPDEARSLKAYGELPEHAKINEMDTFGAGDDDEIMFDDIGEDDEDIDDI", "length": 144 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "J3QMW9-1", "protein_name": "BTB domain containing 35, family member 6", "gene_name": "Btbd35f6", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLSCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGRTWCLHKVFLCQSGYFANILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYRDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLQTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "J3QN64-1", "protein_name": "BTB domain containing 35, family member 22", "gene_name": "Btbd35f22", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGRTWCLHKVFLCQSGYFANILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDMKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYIDNISFLESEEGLIFQPVFKKLRFQHIIWDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYNEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "J3QNQ5-1", "protein_name": "BTB domain containing 35, family member 24", "gene_name": "Btbd35f24", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEGIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGRTWCLHKVFLCQSGYFANILKDTWRESHHGVINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIIYDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "J3QP08-1", "protein_name": "Histone H2A", "gene_name": "H2al1k", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAKKMQRRRRQKRTRSQRGELPLSLVDRFLREEFHSSRLSSSALSFLTSVLEYLTSNILELAGEVAHTTGRKRIAPEDVRLVVQNNEQLRQLFKPGGTSVNEDDN", "length": 105 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "J3QP87-1", "protein_name": "Eukaryotic translation initiation factor 4C", "gene_name": "Eif1ad14", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MPKNKGKGGKNRRRGKNENESEKRELVFKEYGQEYAQVTKMLGCGRLEAMCFDGVRRLCNIRGKLRKKVWINTSDIILIGLRDYQDNKADVILKYNQDEARSLKAYGELPEHAKINETDTFGAGDDDEIVFDDIGDEDEDIDDI", "length": 144 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "J3QP96-1", "protein_name": "PRAME like 3C", "gene_name": "Pramel3b", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MMDTKDPPTLLDLATQSLLSNEHAAIQALEEIPRELFVPLFTAAFTGRHKNILTAIVKAWPFACLHIGALSVQEPERELLKALIESLQFLPALNSATRSPKLRILDLRQDAGCKTVCPDISTNSTICFRSCAHSEHSIFKIEGQESLSSSKSEAQPSRLPMELIVDISLDGTLRERNFFALLQNKVEQSLGSLHLCCRDLQINNLCECRHALSHLDLKCVDHLAVDESPLTEVTKLLSHTIQLDSLSLSKIACRSLNGRTFRNFITQLSRMNHLKELSLSSFCLTDHLETVLRVLSADLEFLYLPFCGLSYSDFKFLSECSQVSHLKLLNVNNNPIYWEDCEPFYYLLQNVSSTLQHLKICYCFLTDSTISVLIPALTRCSQLRVLHFYSNQITMGMLMRILELLTPLKELKHVIYPIPVHCYGRWHFQGSLDRQKVEDVQRQLNLMLQEAERSDMNWITYSD", "length": 463 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "J3QPI8-1", "protein_name": "Eukaryotic translation initiation factor 4C", "gene_name": "Eif1ad16", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MPKNKGKGGKNRRRGKNENESEKRELVFKEYGQEYAQVTKMLGCGWLEAMCFDGVRRLCHIRGKLTKKVWINTSDIILIGLRDYQDNKADVILKYNPDEARSLKAYGELPEHAKINEMDTFGAGDDDQIVFDDIGEDDEDIDDI", "length": 144 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "J3QQ02-1", "protein_name": "Eukaryotic translation initiation factor 4C", "gene_name": "Eif1ad11", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MPKNKGKGGKNRRRGKNENESEKRELVFKEYGQEYAQVTKMLGCGRLESMCFDGVRRLCHIRGKLRKKVWINTSDIILIGLRDYQDNKADVILKYNPDEARSLKAYGELPEHAKINEMDTFGPGDDDEIVFDDIGDDDEDIDDI", "length": 144 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7GP63-1", "protein_name": "Large ribosomal subunit protein eL39", "gene_name": "RPL39", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MSSHKTFRIKRFLAKKQKQNRPIPQWIRMKTGNKIRYNSKRRHWRRTKLGL", "length": 51 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "K7N5V5-1", "protein_name": "Predicted gene 5862", "gene_name": "Gm5862", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MALFARLCRLFQRVNVDGRETREGRKDADLPSERNEGRRRWTWRMCMAHRQTTSPVPVKSKKQFEKEEKELIKKIQLTTEETNELRDRLIYVTEGSMNKRPYHRQTRHYKELKLKEKEIMTYLHDLEMKNMEARENNQELKKEKNFYRNLHTRILLEENLIKKKLVILQQESKEVHADWATIHQSLVELNLSGKDEQEKTSNLETQEHQVSEAARELGLATAEEDSILQNELPCQEAPAEHHPQHPPSSSDESSSDESSYSTCPEWE", "length": 267 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N660-1", "protein_name": "Predicted gene 10220", "gene_name": "Gm10220", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MALFARLCRLFQRVNVDGRETREGRKDADLPSERNEGRRRWTWRMCMAHRQTTSPVPVKSKKQFEKEEKELIKKIQLTTEETNELRDRLIYVTEGSMNKRPYHRQTRHYKELKLKEKEIMTYLHDLEMKNMEARENNQELKKEKNFYRNLHTRILLGENLIKKKLAILQQESKEIHADWAIIQQRLVELNLSGKDEQEKTSNLEAQENQVSEAARKLGLATAEEDSILQNELPCQEAPAEHHPQHPPSSSDESSSDESSYSTCPSWE", "length": 267 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N6B6-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r168", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSSQNGAMKTTEEVALQIVLLCQFGIGTMANILLFVHNFSPLLTGCQLRPKEVICANMAVSSILILFMTVFPNNVFVAQRNLLNDLQCKLEYFVYMVARSTNLCSTCVLSTYQFVTLVPGNFSELMVRGRSPKVISYSCCSCWLFGILYNVYIPMKVSGPQNRHNKTSTKSKWVCFTSGFSVGIVFLSFAHDAIFISIMVWASVSMVRLLYRHYQRLQYIFPPHQGNRGYAEIRAAHSIVLLVVTFVSFYLLHCICFILHIVFVDSNLWLRHIGEVLTSSFPTISPLLLIFRDPSYPCSLIFNYKKPVI", "length": 309 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N6B7-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Gm10670", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSVRGKSLKTTEEVALQIILLCQFGVGTMANDFLFVHNFSPVLTGSKQRPRQVILSHMAVANALTLFLTVFPNNMMAFAPRNPPTELKCKLKFFSHLVTRSTNLCSTCVLSMHQFVTLVPISRGKLLLRASVPNLVSYSCYGCWFFSVLSNIHIPIKVTGPQITDNNTDSKSKFFCSTSGFTVRIVFLQFSHDATFMSIMVWTSVSMVLLLHRHRQRMQHILTPNQNPRGQAESRATNTILMLVVTFVSFYLLNFICIIFHTFFIHYNLFIRLLGEILAAGFPTISPLLLIFRDPKNPCLELFHCFKPESLQNLKHRRQLH", "length": 321 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N6G6-1", "protein_name": "Predicted gene 16440", "gene_name": "Gm16440", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFSWLRRLCQKENGDEGEIRTTEKEEGILSHEKGRRKSFWRRHRSARNTSTQNSKITKQRSKINELEELKLDMRKISNDMEEMGGILELYIYEDLNYRMNTEFNIIKSQHEKTMLDMNEMIQSIIGSMQYSKELIEDNYSYSIKEDHLLRECTQLSEKVRILLNENRKLLVEQAGTQLSHEEEKRFCEEASKNICASSAKEQQCVNSSRNRNMAQTTT", "length": 218 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N6J5-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r127", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSDHGKSVKTTEEVALQLLLLCQFGVGTLANVFLFVHNFSPVLTGSKQRPRQVILSHMAMANALTLFLTIFPNNMIAFAPKTPPTELKCKLEFFSHMVARSTNLCSTCVLSIHQFVTLVLVNRGKLILRASVPNFVSYSCYSCWFFSVLSNIHIPIKVTGPQITDNNTDSKSNLFCSTSGFIVGIVFLQFAYDATFMSIMVWTSVSMILLLHRHRQRMQHILTPNQNPRGQAETRATRTILMLVVTFVSFYLLNFICIIFHTLLMHSHLFIRLVSEVLTAVFPSICPLLLIFRDPKDPCSVLFNC", "length": 305 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N6P1-1", "protein_name": "Reproductive homeobox 2H", "gene_name": "Rhox2h", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEKRSINYLLDVGPEEDEENANGVKTLMVLLAGEGRNEGESGRGLPGSGVSAAEGYRAGELSAGGPAAPVAGLMDNSNQEDLSATGCAQEKETQPEEPVPDSMGDLENVKPMSGPWSTVNPVRVLVPKFRHLWRHNFNVLQLQELESIFQCNHYISTTEENRLARSMGVSEATVQEWFLKRREKYRSYKRL", "length": 191 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N6T9-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r175", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLLQNKSVKTTEEVALQVLLLCQVGFGTAVNIFLIVHNLSPILNGSQQRPIKVILANLAVGNTLILLFAFPNNMTLFVPKDPPTDLKCKLGYFIWLVARSTNMCSTCFLSTYQLVTLAPGTWGRVMLRGRAPKFVRYICYSCWLFSVLNNAHIPMKVNGPQKTHNDTNTKNKWVCSTTGFSIGMRILSFAHDAVFISIIIWSSVSMVILLNRHHQRLQHIQSTNQKLRVHAETRASHTILLLVVTFVTCYLLDCICTVCNISFLDSRVWLRRVKQILDVSFPTFSPLLLIFRDPKDPCSLLFCC", "length": 304 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N6U2-1", "protein_name": "Predicted gene 3542", "gene_name": "Gm3542", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFSRLLRLCQKENGDEGETRPKKKEEGILSHEKGRRKSFWRRHRSARNTSTQNSNITNQISNINKVEELKLHIRKTSNERKEMCGILNVYMYEDLNYRMNTEFNIIKSQHEKTMLDMNKMIQSIIGSMQYSKELIEDNYSYSIKEDHLLRECTQLNEKVRILLNENRKLLVEQAGTQVSCEEERGSLRRPARTSVPQVQRNSSFPKCETVQQKLEHGTDHDMISLKEKCWWKRTGCAQEIHHCCLSSLITMAVMGCMLLLYFGFLGMNRP", "length": 270 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N6W5-1", "protein_name": "Predicted gene 17019", "gene_name": "Gm17019", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MALFARLCRLFQRANVDGRDTREGRKDADLPSERNEGRRRWTWRMWMALRQTSSPVPVISKKQFEKEEKKLIKEIQLTTEETNELRDRLIYVTEGSMNKRPYHRQNPLYEKLKLKEKEIMTFLHNLEMENMEAQENKQELKKETHFYRNLHSRLLMEENLIKKKSMTLQQESKEVQADWAIIHQRLVELNLSVKDEQENSNLETPEYQVSEAARELGLATAEEDSILQNELPGQEAPAEHHLQHPQSSSDESSSI", "length": 255 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N6W9-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r170", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLLQNKSVKTTEEVALQVLLLCQVGVGTAVNIFLIVHNLSPNLNGSQQRPIKVILANLAVGNTLILLFAFPNNMTLFVPKDPPTDLKCKLGYFIWLVARSTNMCSTCSLSTYQLVTLAPGTWGRVMLRGRAPKFVRYICYSCWLFSVLNNAHIPMKVSGPQKTHNDTNTKNKWVCSTTGFSIGMRILSFAHDAVFISIIIWSSVSMVILLNRHHHRLQHIQSTNQKLRVHAESRASHTILMLVVTFVTCYHLDCICTFCNISFLDSQLWLRRVKQILDASFPTFSPLLLIFRDPKDPCSLLFCC", "length": 304 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N6X3-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r94", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSDHGKSVKTTEEVALQLLLLCQFGVGTLANVFLFVHNFSPVLTGSKQRPRQVILSHMAMANALTLFLTIFPNNMIAFAPKTPPTELKCKLEFFSHMVARSTNLCSTCVLSIHQFVTLVLVNRGKLILRASVPKFVSYSCYSCWFFSVLSNIHIPIKVTGPQITDNNTDSKSNLFCSTSGFIVGIVFLQFAYDATFMSIMVWTSVSMVLLLHRHRQRMQHILTPNQDARGQAETRATHTILMLVVIFVSFYLLNFICIIFHTLLMHSHLFIRLVSEVLAAVFPSICPLLLIFRDPKDPCSVLFNC", "length": 305 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N6X7-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r103", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSDHGKSVKTTEEVALQLLLLCQFGVGTLANVFLFVHNFYPVLTGSKQRPRQVILSHMAVANALTLFLTIFPNNMIAFAPKTPPTELKCKLEFFSHMVARSTNLCSTCVLSIYQFVTLVLVNRGKLILRASVPNFVSYSCYSCWFFSVLSNIHISIKVTGPQITDNNTDSKSNLFCSTSGFIVGIVSLQFAYDATFMSIMVWTSVSMVLLLHRHRQRMQHILTPNQYRRGQAETRATRTILMLVVTFVSFYLLNFICIIFHTLLMHSHLFIRLVSEVLAAVFPSISPLLLIFRGPKDPCSVLFNC", "length": 305 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N6Y3-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r115", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSDHGKSVKTTEEVALQLLLLCQFGVGTLANVFLFVHNFSPVLTGSKQRPRQVILSHMAMANALTLFLTIFPNNMIAFAPKTPPTELKCKLEFFSHMVARSTNLCSTCVLSIHQFVTLVLVNRGKLILRASVPKFVSYSCYSCWFFSVLSNIHIPIKVTGPQITDNNTDSKSNLFCSTSGFIVGIVFLQFAYDATFMSIMVWTSVSIILLLHRHRQRMQHILTPNQNPRGQAETRATRTILMLVVTFVSFYLLNCICIIFHAFYIHSRLFIRLVSEVLAAVFPSICLHNGVLLSY", "length": 295 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N6Z0-1", "protein_name": "Predicted gene 17026", "gene_name": "Gm17026", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "XRSSWVPKQACCPCSSGYFRERIEYTQTPDQGRRRPAAHHGGKGQETTGHGEGSAGAASPQAPTINDQEKRHERLEKLKRELQNIKNARDELQGILANYTNKDLNDRINFETFMLQMQHDQVMTDLKRMPQDISEALYKCKQLTKENQFYCFRNCHLLIESNLIQHKVRMLRKENRQLLREQIALEECNIETKILCKEGSQKIKDHYTKQQQI", "length": 213 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N701-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r159", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSDHGKSVKTTEEVALQLLLLCQFGVGTLANVFLFVHNFYPVLTGSKQRPRQVILSHMSVANALTLFLTIFPNNMIAFAPKTPPTELKCKLEFFSHMVARSTNLCSTCVLSIHQFVTLVLVNRGKLILRASVPNLVSYSCYGCWFFSVLSNIHIPIKVTGPQITDNNTDSKSNLFCSTSGFIVGIVFLQFAYDATFMSIMVWTSVSMVLLLHRHRQRMQHILTPNQNTRGQAESKATRTILMLVFTFVSFYLLNFICIIFHTLLMHSHFFIRLVSEVLAAVFPSISPFLLIFRDPKDPCSVLFNC", "length": 305 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N708-1", "protein_name": "Predicted gene 10128", "gene_name": "Gm10340", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFSWLLRLFQKENGDEGETRPTEKEEGILSHEKGRRKWLWRRHRSARNTSTQNSKMTKKRSKRNELEELKLDMRKISNDMEEMCGILNLYMYEDLNYRMNTEFNIIKSQHEKTMLDMNKMIQSIIGSMQYSKELIEDNYSYSIKEDHLLRECTQLHENVRILLNENRRLLVEQAGHKCPVGKKRGSLRRPARTSVSQVPRNTSVI", "length": 205 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N731-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r57", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEVLALNILLLCHVVVGTVGNILLFVHNFSPNLTDSRLRPIQVILINLAVANAFMLLFSTYSYDLIDFVPRKPPTDLKCKLAYFFHMVARGTIMCSTCVLSTYQFVTLVPGNWARVMFREISPKVVSYSCFSCWLFSVLNNAYIPMNVSGPQKSHNDSDSKDNWICSISGVSVDMNFLRFSHDIIFLGIMAWTSVSMVIHLNRHHQRMNHIHKVNQNNRGHAETRAAHTILMLVVTFVSLYILNCIIILFHITFVESRLSLRHVTKLLSLSFPTISPLLLIFREPRGHCSLLFSVGLEIHVTGGVITEEQ", "length": 310 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N744-1", "protein_name": "Predicted gene 8104", "gene_name": "Gm8104", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFSWLRRLFHRENGNQGETRPRQKESAIPSCKNRRMKSFWGRHMSAGKTSSQNCNITNHMKNMNKLDDMKFYIRKINAERLELFRILDIDMNTDLNYRMNIDFTIIKSQHEKTMLDMEKMTQSISDTIEKYKEFIEDKDSYSFTHTYLLKECNQLKEKVRMLLNENRKLLVEQADQETSYGEEKRFCDETSKNIHPKC", "length": 198 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N751-1", "protein_name": "Predicted gene 3696", "gene_name": "Gm3696", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFSWLLRLFQKENGDEGETRPKKKEEGILSHEKGRRKWLWRRHRSARNTSTQNSKMTKKRSKRNELEELKLDMRKISNDMEEMCGILNLYMYEDLNYRMNTEFNIIKSQHEKTMLDMNKMIQSIIGSMQYSKELIEDNYSYSIKEDHLLRECTQLNENVRILLNENRRLLVEQAGHKCPVGKKRGSLRRPQEHLCPKCQGTAV", "length": 203 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N757-1", "protein_name": "Predicted gene 3667", "gene_name": "Gm3667", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFSWLLRLFQKENGDEGETRPTEKEEGILSHEKGRRKSFWRRHRSARNTSTQNSKMTKKRSKINELEELKLDMRKISNDMEEMCGILNLYMYEDLNYRMNTEFNIIKSQHEKTMLDMNKMIQSIIGSMQYSKELIEDNYSYSIKEDHLLRECTQLNEKVRILLNENRRLLVEQAGHKCPVGKKRGSLRKPARTSVSQVPRNSSVK", "length": 205 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K9J7F4-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r260", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSAHGNSLKTTEEVALQILLLCQFGVGTVANVFLFVHNFSPVLTGSKQRPRQVILSHMAVANALTLFLTIFPNNMMAFAPKTPPTELKCKLESFSHLVVRSTNLCSTCVLSVHQFVTLVPLNRGKGKLVLRASVTNMASYSSCSCWFFSVLSNIHIPIKFSGPQITDNNTDSKRKLFCSTSGFSVGIVFLQFAYDATFMSIMVWTSVSMVLLLRRHRQRMQHILTPNQNPRGQAESKATHTILMLVFTFVSFYLLNCICIIVHALFMHSHFFVRLVSEILTAIFPSISPLLLIFRDPKDPCSVLFNC", "length": 307 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K9J7G0-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r163", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSAHGKSVKTTEEVALQILLLCQFGVGTVANVFLFVHNFSPVMTGSKKRPRQVILSHMAVANALTLFLTIFPNNMSAFAPKTPPTELKCKLEFFSHMVARSKNLCSTCVLSIHQFVTLVPVNRGKGKLILRASVPNLWNYSCYSCWFYSVLSNIHIPIKVTGPQITDNNTDSKSNLFCSTSGFIVGMVFLKFSHDATFMTIMVWTSVSMVLLLHRHHQRMQHILTPNQDARGQAETRATHTILMLVVTFVSFYLLNCICIIFHAFSIHSRLFIRLVSEVLAAVFPNICPLLLIFRDPKDPCSVLFKC", "length": 307 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K9J7G4-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r242", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSVHDKSVKTTEEVALQLLLLCQFGVGTVANVFLFVHNFSPVLTGSKQRPRQVILSHMAVANALTLFLTIFPNNMMAFAPKTPPNELKCKLESFSRLVARSTNLCSTCVLSIHQFVTLFPVSRGKGKLILRASVQNLASYSCYSCWFFSVLSNIHIPIRVTGPQITDNNTDSKSNLFCSTSGFIVGIVLQFAHDATFMSIMIWTSVSMILLLHRHCQRMQDILTPNQNPRGQAETRATRTILMLVVTFVSFYLLNCICIIFHAFFIHSRLFIRLVSEVLAAVFPSICPLLLIFRDPKDPCSLLFKC", "length": 306 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K9J7H2-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r256", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSAHGKSLKTTEEVALQLLLLCQFGVGTVANVFLFVHNFSPVLTGSKQRPRQVILGHMAVANALTLFLTIFPNNMMAFAPKTPPNELKCKLESFSLLVARSTNLCSTCVLSIHQFFTLFPVSRGKGKLILRASVQNLASYSFYSCWFFSVLSNIHIPIRVTGPQITDNNTDSKSNLFCSTSGFIVGIVLQFAHDDTFMSIMVWTSVSMVLLLHRHRQRMQHILTPNQNPRGQAESRATHTILMLVFTFVSFYLLNCICIIFHAFSIHSCLFIRLVSEVLAAVFPSICPLLLIFRDPKDPCSVLFKC", "length": 306 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K9JA28-1", "protein_name": "Interferon lambda receptor 1", "gene_name": "IFNLR1", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MSAWRIRVLATLCFLWQPRVHGQLPPPQNVTLLSKDFDMILTWTPGEGSPPDVLYTVRYESKTRMDKWIKVPHCRNIHSVSCNLTCVIPNFFIKFRAQVKATSGRFHSPWVKSQFKEYHLDVELAPPLLNVNVKENVIHVNATFPMAICVESLPWMYDFNLWEAGSEDKKQYKSIFRKKAVTIDTTALRGNYCFNARSSIQSIDFKHSKFSQPVCMQLNYEGEWKFPFSATIPVFVLLILLTSASIIWLLKQDAKHKKMPQTLDLSNCKIAGPTFCCELRENEFLTDCLICTDKPMSQGKKNKTLAQNNQMWMASFLPSSSSEEEEEEEEEDSSSFIPYTEMLQFPRKHFNFQTPRTADAETILDSTSGVLSVVGGSTLDLSALGFSFFPIRKNEMDTSGSQGNEKASHSHSSSLGRISLTDVRFPGPREHGQHGTDSNDCLEVSLLHTLMNSSCTRLPADEHCLYKKDHDFTICYQKPTLDQPVQVSENPLLNEDPSMEKFIYLQTLQVAEDEGFASDCDSGNFTEGTPPASTVLSDELRISDMEKRYDKKFKFKGYQHSHYMRRS", "length": 567 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "L7MU37-1", "protein_name": "Reproductive homeobox 3H", "gene_name": "Rhox3h", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSMKPERSISNWIHSNVEPAGRNLFQVNGHRSALLPELPQDYHRASRSVNGCETKMDSTQGTKVLPAEESRNEEDGGQVESALGATAARGRGKEALNGESPAAAGTAGLVEEDRNKEDGGTKGGEKNEQEVREQIPEHVEGESDQAEAPRQVPRRRLHHRFTQWQLDELERIFRMNYFLSLEARKQLARWMGVNEAIVKRWFQKRREQYRWYKRL", "length": 215 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7MU51-1", "protein_name": "Olfactory receptor", "gene_name": "Or4a76", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGQSNNVTEFVLLGFTQDPAGQKALSVMFSLIYIVTMVGNLLIVGTVIASPSLGSPMYFFLASLSLMDAIYSTAITPKLIVDLLCEKKTISFRACISQLFIDHLFGGVDIVILLAMAYDRYVAICKPLHYLIIMNRRVCILFLVMAWAGGLAHALFQVLAVYNFPFCGPNIIDHFGCDIYPLLLLACTDTYFLGLSIIGNNGAMCIVIFTLLLLSYGIILRFLKNHSQEGRRKALSTCGSHITVVFLFFVPCIFMYVRPVSSFPIDKFITVIYTIVTPMLNPLIYTLRNSEMKNSMEKLLQKTLSPSRIRLSSCCLCY", "length": 318 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7MU81-1", "protein_name": "BTB domain containing 35, family member 17", "gene_name": "Btbd35f17", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGKTWCLHKVFLCQSGYFANILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANTWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7MU83-1", "protein_name": "BTB domain containing 35, family member 18", "gene_name": "Btbd35f18", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGKTWCLHKVFLCQSGYFANILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDQVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7MUB9-1", "protein_name": "Reproductive homeobox 2G", "gene_name": "Rhox2g", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MERQSINYKLDVGPEEDEENANGIKTLMVLLAGEGRNEGESGRGLPGSGVSAAEGYRAGELSAGGLAAPVADLMDNNNQEDLGATGCAQEKEKQPEEPVPDSMGDLENVKPMSGPWSTVNPVRVLVPEFLHGWQQSFNVLQLQELESIFQCNHYISTTEAKCLARSMGVSKATVQEWFLKRREKYRSYKRL", "length": 191 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7N1X6-1", "protein_name": "F-box/WD repeat-containing protein 15", "gene_name": "Fbxw15", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAIHLPCLPMMKILSYLDAYSLLQAAQVNKDWNELASSDVLWRKLCQKRWLYCDMDTLQLQGKETWKQFFIDRIWQERAKFRAKAKDFTYKEIPLMCGLFGYACYISGCGLTRKGQDKSVVCMVNSKNTISTWDVHKSVITWKSPEQPASIKLLTTLPEMHIAVTVDIQSTIKLWDCHNREALATNNLKSPCKSLKAVFTKDGPIVLIGDTLGNIHIFRIPDLYLISTVNVLPYGFDGIYCSPQKKWVLLSKKHPHILPKVFYMSSFLRTSEFSAPVSTVLKLSLYERVFWTPRREDRITLMSRSGFPQVKMFETYDIKLEEFGNKRIVKGKLIASFELQCHKVNPQRFGVSDKNVIVCSTESSLLLFDINGLRLKTFQYCPEMIVKLSVDPLHVIVICNTGSMDVYAWEERSLLLRKCYRLHIERPLPLYGFIYKAACDDVSIIQLITDELSLSSLTSYALNICS", "length": 466 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7N1X9-1", "protein_name": "Demilune cell and parotid protein 1", "gene_name": "Dcpp1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFQLEAMLALLILAFLGTPTVLTQDYHGPEVGKHSCTSAPEGKNITSIRVFLKGRLIVGIQLNYDDNKDGQVYGSTAGKEMVARLSKEEHIIAAQGTYTPSALTQIIFTTNQPRQLMVGYYVGNSEYSSFPNDPSHVLKGACVSWRAGGIKSILFLWGSENSSCVKYGHSG", "length": 171 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7N1Y3-1", "protein_name": "PRAME like 51", "gene_name": "Pramel51", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MIHSKERKYRLGLLEPGVTAFPCPNMVICLHCPDQDDSLEEVTEECYSPPTLQNLAIQSLLRDEALAISALTDLPQSLFPVIFEEAFTDGHIGILKAMIPVWPFPYLSLGKQINNCNLETLKAMLEGLDILLAQKVQTSRCKLRVINWREDDLKIWAGSHEGEGLPDFRTEKQPIENSPGCEVKKELKVTTEVLRMKGRLDESTTYLLQWAQQRKDSIHLFCRKLLIEGLTKASVIEIFKTVHADCIQELILRCICIEELAFLNPYLKLMKSLFTLTLDHIIGTFTLGDSEKLDEETIFSLISQLPTLHCLQKLYINDVPFIKGNLKEYLRCLKKPLETLCISNCDLSQSDLDCLPFCLNICELKHLHISDIYLCDLLLEPLGFLLERVGDTLKTLELVSCCIVDFQFSALLPALSQCSHLREVTFYDNDVSLPFLKQLLHHTALLSQLIYECYPAPIECYDDSGVILTHRLESFCPELLDILRAKRQLHSVSFQTTKCSKCGGCYIYDRHTQCCRFVEL", "length": 520 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7N1Y5-1", "protein_name": "Olfactory receptor", "gene_name": "Or11g25", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKTLSSPSNSSTITGFILLGFAYPREGQILLFVIFFIVYILILMGNASIICAVYCDQRLHTPMYLLLANFSFMEIGYVTSTVPNMLANFLSDTKVISFSGCFLQFYFFFSFGSTECFFLAVMAFDRYLAICRPLHYSSLMTGRLRNTLVTSCWVLGFLWFPVPIIIISQMSFCGSRIIDHFLCDPGPLLALACSRVPLIEVFWSIIMSMLLVIPFLFIMGTYILVLRAVFRLPSREGQKKAFSTCGSHLTVVSLFYCSVMIMYLSPTSEHEAGMQKLVTLFYSVGTPLLNPMIYSLRNKDMKNALQKILRT", "length": 311 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7N227-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r125", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSAHGKSMKTTEEVALQIILLCQFGIGTVANVFLFVHNFSPVLTGSKQRPRQVILSHMAVANALTLFLTIFPNNMSAFARKTPPTELKCKLEFFSHMVARSTNLCSTCVLSVHQFVTLVPVNRGKGKLILRASVPNFANYSCYSCWFFSVLSNIHIPIKVTGPQITDNNTDSKSNLFCSTSGFIVGMVFLQFSHDATFMSIMVWTSVSMVLLLHRHRQRMQHILTPNQDARGQAETRATHTILMLVVTFVSFYLLNCICIIFHAFSIHSRLFIRLVSEVLAAVFPSICPLLLIFRDPKDPCSVLFKC", "length": 307 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7N255-1", "protein_name": "Predicted gene 3099", "gene_name": "Gm3099", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFSRLLRLCLKGNGDEGETRPKKKEEGILSHEKGRRKLFWRRHRSARNTSTQNSNITNQISNINEVEELKLHIRKISNERKEMCEILNVYMYEDLNYRMNTEFNIIKSQHEKTMLDMNKMTQFIIGSMQYSMELIEDNYSYSIKEDHLLRECTQLNKKVRILLNENRKLLVEQAGTQVSCGEEKRFCEEASKNICASSAKEQQLP", "length": 205 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7N259-1", "protein_name": "Demilune cell and parotid protein 3", "gene_name": "Dcpp3", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFQLEAMLALLILAFLGTPTVLTQDYHGPEVGKHSCTSTPEEKNITSIRVFLQARSIVGIQFNYDDKDGQVYGSTAGKEMVARLSKEEHITGVEGSYSPSALTQIVFTTTQPRQLMVGYHVGIYQYSSYPDDPSFVLKGACVSWRAGGIKSILFLWGSENSSCVKYGHSG", "length": 170 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7N270-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r123", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSAHGKSLKTTEEVALQLLLLCQFGVGTVANVFLFVHNFSPVLTGSKQRPRQVILIHMAVANALTLFLTIFPNNMSAFAPKTPPTELKCKLEFFSHMVARSTNLCSTCVLSIHQFVTLVPVNRGKGKLILRASIPNLWNYSCYNCWFYSVLSNIHIPIKVTGPQITDNNTDSKSNLFCSTSGFIVGMVFLQFAYDATFMIIMVWTSVSMVLLLHRHRQRMQHILTPNQNPRGQAETRATRTILMLVVTFVSFYLLNFICIIFHAFSIHSHLFIRLVSVVLAAVFPSICPLLLIFRDPKDPCSVIFKC", "length": 307 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7N273-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r118", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSVHDKSVKTTEEVALQLLLLCQFGVGTVANVFLFVHNFSPVLTGSKQRPRQVILSHMAVANALTLFLTIFPNNMMAFAPKTPPNELKCKLESFSRLVARSTNLCSTCVLSVHQFVTLFPVSRGKGKLILRASVQNLASYSCYSCWFFSVLSNIHIPIRVTGPQITDNNTDSKSNLFCSTSGFIVGIVLQFAHDATFMSIMIWTSVSMILLLHRHCQRMQDILTPNQNPRGQAETRATRTILMLVVTFVSFYLLNCICIIFHAFFIHSRLFIRLVSEVLAAVFPSICPLLLIFRDPKDPCSLLFKC", "length": 306 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7N275-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r169", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLSQNKSVKTTVEVALQILLLCQVGVGTVVNIFLFVHNLSPFLNGSQQRPIKVILANLALGNTLILLFAFPNNIRVFIPREFPTDLKCKLGYFIWLVARSTNMCSTCSLSTYQLVTLAPGTWGRVMLHGRAPKFVRYTCYSCWLFSVLNNAHIPMKVSGPQKTHNDTNTKSKWVCSTTGFSIGMRILSFAHDAVFISIIIWSSVSMVILLNRHHQRLQHIQSPNQKLRFHAETRAAHTILMLVVTFVTCYLLDCICTSLHISFVDSRVWLRRVKEILAVSFPTFSPLLLIFRDPKDPCSLPFSC", "length": 304 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7N288-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r151", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSDHGKSVKTTEEVALQILLLCQFGVGTLANVFLFVHNFYPVLTGSKQRPRQVILSHMAVANALTLFLTIFPNNMIAFAPKTPPTELKCKLEFFSHMVARSTNLCSTCVLSIYQFVTLVLVNRGKLILRASVPNFVSYSCYSCWFFSVLSNIHISIKVTGPQITDNNTDSKSNLFCSTSGFIVGIVSLQFAYDATFMSIMVWTSVSMVLLLHRHRQRMQHILTPNQYRRGQAETRATRTILMLVVTFVSFYLLNFICIIFHTLLMHSHLFIRLVSEVLAAVFPSISPLLLIFRGPKDPCSVLFNC", "length": 305 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7N2A6-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r116", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSAHGKSVKTTEEVALQILLLCQFGVGTVANVFLFFHNFSPVLTGSKQRPRQVFLSHMAVANALTLFLTIFPNNMSAFAPKTPPNELKCKLEFFSHMVARSKNLCSTCVLSIHQFVTLVPVNRGKGKLILRASVPNLWNYSCYSCWFYSVLSNIHIPIKVTGPQITDNNTDSKSNLFCSTSGFIVGMVFLQFSHDATFMSIMVWTSVSMVLLLHRHRQRMQHILTPNQDARGQAETRATHTILMLVVTFVSFYLLNCICIIFHAFSIHSRLFIRLVSEVLAAVFPSICPLLLIFRDPKDPCSVLFKC", "length": 307 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7N2B4-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r128", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSAHGKSVKTTEEVALQILLLCQFGVGTVANVFLFVHNFSPVLTGSKKRPRQVILSHMAVANALTLFLTIFPNNMSAFAPKTPPTELKCKLEFFSHMVARSKNLCSTCVLSIHQFVTLVPVNRGKGKLILRASVPNLWNYSCYSCWFYSVLSNIHIPIKVTGPQITDNNTDSKSNLFCSTSGFIVGMVFLQFSHDATFMTIMVWTSVSMVLLLHRHHQRMQHILTPNQDARGQAETRATHTILMLVVTFVSFYLLNCICIIFHAFSIHSRLFIRLVSEVLGAVFPNICPLLLIFRDPKDPFSVLFKC", "length": 307 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7N2C2-1", "protein_name": "Predicted gene 2974", "gene_name": "Gm2974", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFSWLLRLFQKENGDEGETRPTEKEEGILSHEKERRKWFWRRHRSARNTSTQNSKMTKKRSKINELEELKLDMRKISNDMEEMCGILNLYMYEDLNYRMNTEFNIIKSQHEKTMLDMNKMIQSIIGSMQYSKELIEDNYSYSIKEDHLLRECTQLNENVRILLNENRRLLVEQAGHKCPVGKKRGSLRRPARTSVSQVPRNSSVI", "length": 205 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7N474-1", "protein_name": "Spermatogenesis associated glutamate (E)-rich protein 1E", "gene_name": "Speer1e", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "ARRHTSSTAPDLSKKEFKKEKERLTTELHLLIQLRNEQRDHLIDFKESSNYNRTKPTQKKNPFYEQLRSTKNQVLSSVHKLEMGIIEAQENIQELNKWIDYFTNLHSQLLMEKNLKMSITQNQKNKEVEIDWALIEKYLVDVNLNGRTGADQQP", "length": 154 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "M0QWR4-1", "protein_name": "Aly/REF export factor family member 14", "gene_name": "Alyreffm17", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MADKMDMSLEDIIKLTKIQQRRHDRPDSRVNRGTGSKRYRPAFTHGGRNRLAPYCRPKQLPDKWQHDLFIGGFRGQNHVDTGGKLFLSNLHFGVSDADIQLLFAEFGTLKKSAVHYDRCGRSLGTAQVHFERKADALKAMREYNGAPLDGRPMNIQLATSQIDRQGRPAQSKNRGGMTRNPGSGVLSGGGTKKWTLGGSQGRGRGTIRNSKLQQQQQQQKQKQQQQQQKQQQKQQQKQQQQLSAEELDAQLDAYQEMMDTS", "length": 261 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "M0R3T3-1", "protein_name": "Peptidase S1 domain-containing protein", "gene_name": "ENSRNOG00000067174", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MRFLVLCLILSLGDYGAFPLIQSRIHRGCKGERHSQPWQVAMYHYDKAVGWGWHPSPTTMSTSPSHNKVRLGQHSLDADGDTGQDVPVRHSIPHPLYNRSLQMPTFLSPDADNSHNLMLRQLREPANTTEAVRVTEEPTEEAKLGSRCLASGWGSTRPDKCMPGMLQCVDLTLMSSDVCTYAYSQRVTESMLCAGHQEGSRDTCMGDSGTTLICDRMLQGITSWGGNPCA", "length": 230 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "M0R777-1", "protein_name": "non-specific serine/threonine protein kinase", "gene_name": "Smokwl5", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MASKSKEKTLGSHYKILSYLGQGSFGTVNLAWHLKTQALVAIKMLEISKETISSILSERAILETLHHPNIIRLFQVLITSSHVNFVLEYAPGGSLFELIKEGGPLQEEVAKKIFGQTVSAVKYCHNLDIVHRDIKPQNILTDAEGNGKLTDFGLATKFRPGTLLKELCGTKEFYAPELVLREPYNGKKTDVWSLGVLLYFISTGYCPFRGVTTKDMEKKIATGTYTIPTYFSGQLENLIHQILTVSPEMRPSIEDIEKHPWVRKCEVNIPTITCPDYKIVEMLCGMGYNANKILESLQKKKYDEPMAAYLILKDKVRQEIEHGTTTSDMPVDQGPLPPQSPAHHSVSGLPLKRRASEPNFGLLHIWPPGEQVARHNVARSVSMPPIALYGTKKQNSTSTSALHSRPVASPCVCNTILEIEIPLPTKQDFDMKTSSPPQRIGYFQRLCQRIRDCLSRLCCFLWAPKVHSPRKWLP", "length": 474 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "M0R9M1-1", "protein_name": "Olfactory receptor family 52 subfamily N member 1B", "gene_name": "Or52n1b", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSLLNVSSLTPASLILNGIPGLEEVNLCIFFPLFTMYSIALTGNFGLIYLIYSEEVLHRPMYIFLALLSFTDVLMCTSTIPNTLFISWFNFKKIDFKACLAQMFFVHTFTGMESGVLVLMVLDLYIAMCYPLRYATILTNVVIAKAGMLTFLRGVALVIPFIFLTKRFPYCKGNVIPHTYCDHISVAKISCGNVQINAIYGLMVVLLIGDFDIPCITVSYTMILWAAVSLSSADARQKAFSTCTAHICAIVITYVPAFFTFFTHRFGWHTIPSHIHIIMANLYLLMPPTMNPIVYGVKTKQIQKRVIRFFFKGRENSSHKF", "length": 321 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "M0R9X6-1", "protein_name": "Paired immunoglobin-like type 2 receptor beta 1 like 2", "gene_name": "Pilrb2l4", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MALLVSLPEQNLAMAWILLLLLLAACLHTGNSAGYQKTQDYGVNQPEQLTGIQGGSIEIPFSFYFPWELAKDPQMSIAWRWKVFFGEVIYNSTLLFLHEHFKGRLIMNWTQGQTSGVLRILNLKANDQSTYFSRIFLQATEGMKLWQSRAGTKLIIHALSTTMASPSIIPSAVPTAGLENTRGQRNPSLLNLGAMVGMVMAKVVVIIPLYGWVIFLWWKQRLPTARISHQVSLHHTPCIPQSSMSSLWESELVAAGFSCESHSWITPTSAMGARIPSPWNQGPPVCLWA", "length": 289 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "M0RAD6-1", "protein_name": "Olfactory receptor", "gene_name": "Or1f19f", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MRSTNQSSVSEFLLLGLSRQPQQQQLLFLLFLIMYLATVLGNLLIILVISTDSHLHTPMYFFLSNLSFVDVCFSSTTVPKVLANHILSSQAISFSGCLTQLYFLCVSVNMDNFLLAVMAYDRFVAICHPLYYTTKMTHQLCVLMVSGSWVTASLNALLHTLLMARLSFCGDNIIHHFFCDVTPLLKLSCTATNLNELMILTEGAVIMVTPFVCILISYIYITNAVLRVSSFRGGWKAFSTCGSHLAVVCLFYGTIIAVYFNPVSSHSSEKDTAATVLYTVVTPMLNPFIYSLRNNDLKGALRKVVHRKI", "length": 309 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "M0RBH5-1", "protein_name": "Surfactant associated 2", "gene_name": "Sfta2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MEPSMCLFLLLTLLCSSLAGPTKVTLQVKLTEASQAKTSQDSGFLDMLQKICLLLHLSPGTNVTLHHKGPPHHLTCRA", "length": 78 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "M0RCJ6-1", "protein_name": "EF-hand domain-containing protein", "gene_name": "AABR07013776.1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MADQLTEEQIAEFKEAFPLFDRDGDQTVTTKELGMVMGSLGQNPTEAELQDMISEVDADGNGTINFPEFLTMMARKMKGTDVEEEIREAFRVFDKDGYTSAAEFRHVMTTLGEKLTDEEVDGMIREADMDGDGQVIYEEFVQMVTAK", "length": 147 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "M0RCP1-1", "protein_name": "Leukocyte immunoglobulin like receptor B3", "gene_name": "Lilrb3", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MVSTLTALAYLGLILGSENPVLSGAFTKPTIKMVPSNVVTTGKQVTIFCEGSSHAKEYRLHKEGSPDYLTPTTFLETENKAKFSISPIQWNNAGQYWCSYRSLTNKLRQSDIMELVVTGVILGEVTLSALPSYVVTSGRNVTLQCASQVVYDRFILMKEDEKFSTAMPSWKIYPVLWGAIFTLGPVTSNQRWRFTCYGYYLSSSLIWSKPSNHLELLVSGTLHKPILWAHPGSMVTSGSPVTIWCEGDQETQTYVLYRQGSLESWNRQTQKDYNNKAEFTIPSVTYLNAGHYFCYSYTSAGWSEHSDTLELVVTGVYKKPIFLALKNPIVNLGVTVTISCTSNQSFNCFLLMDDDQKIYRFFDLQYSYSGESLARFQVGPITSRQRWRFRCYGYYTDNPQVWSEASDPLDFLVSGNLQKPTLWAEPGSVIESGNSVTIWCEGTMETQIYFLYKEGSPSSWLRQTPKEPGNKAMFFIAFMEKHNAGQYRCYCYNFGGWSQHSDTLELVMTGVHHGKPTLSAFPSPMVTSGGNVTLYCASSTIYDWYIVTGQDLKFSRFQRAQFIPTEMSQALFSEISVASRKKGPFRCYGFNESTPHLWSEASNPLEIHVSGVSRKPSLLNQQGPVLAPGENLTLRCSSELSYDRFSLSKEGRSDLPQLSVSQSQTGEYYANFFLYSVDFSIAGQYRCYGASRFSSEWSAPSVPQDILVTGHPPITPSLSVNPGTIVSSGENVTLLCQSSIPMDTFFLFKKGDAYPYMHQRLKFQGPQCKAEFSLSAVTPNIGGIFTCFGSQSSSPYLLSHPSVPVEIKVSGLAKYQKSLIWVSVVFFLLFFVLTLFFFLRLWHQNKHRKGVQTKIDLQHPEGAVEPKSIVGHLQKSSRPAPAIQEEILCEKRWPGREITEVSASDATVKVTRSADNVELGILSQHQDDPSIHLYAQVKPARLRRAQTTSSSLFPKELQHSKHRQKNRDQVIDQQADTSQDSHAVIYAQLHIMTPRQGRQTSLFPGRIC", "length": 1008 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "M0RCQ2-1", "protein_name": "G-protein coupled receptors family 1 profile domain-containing protein", "gene_name": "LOC100361204", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MDSSIPDPEADLIQLNGSYHTETSPCVIESRVMILLSIIIAFFGLAGNAMVLWLLAFRMRRNVFSVYILNLAGANFLFLCTHTAFSLEKIIVLFHSVHIHIPLLFYTLSTLAYLAGVSMVTAISAEYWLSGIWPYWYQGQRLKHTTTVICTGLWGLALLLSLLEGKSCGFLGSTYNQDVCWKLDFIIVAWLLVLFAVLSRSIQVLLVRIFCGSQRTPVTKLHVTIVLTALVLVICGFPFGIIFYLLYWTTEVYYIMPCNSFHETILLLSYINSCANPIICLLVGSIRHCRFQCGTLRLLLHRAMQDIPEEEGEELEEVVGERVQSSIP", "length": 328 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "M0RCW7-1", "protein_name": "Uncharacterized protein", "gene_name": "Pilrb1l3", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MALLVSLPEQNLAMAQLLLLLLSAACLHTGNSAGYPKKNVFSVDQPAVLSGVQGGSIEISFSFYFPWELAKVPQMSIAWRWKNYHGEYIYNSTQPFIHEHFKGRLIVNWSQGQTSGVLRILNLKENDKATYFSRVFLPTTEGMKSWQSVAGTQLIIIHAPSTTVVSPSIIPSVVPIAGLEDTRGKRTPSLLNLGAMVRMVVSKVVVIIALYGWVIFLWWKQRSAWSLLSFLTTWKSEEQMQMNTAPAPKEFK", "length": 252 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "M0RCY4-1", "protein_name": "Retinoic acid early-inducible protein 1 domain-containing protein", "gene_name": "AABR07000137.1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSSAPLGSLGRKSKNQSLGLDMLGTVLSTDSLSCTFTVKYRSSPGQCSVNGKPLLLFNDERQNSPVGKPEKKGNATKVCAELNQSLKDIFQKMMNLESWLFESKGNHTLQVTVQSQYNQGIFMDGCWVFTIDRQYPFYFYPKIMTWRESHPDASRTVSQWQNNRQVAQSLRTCSMGDFSQCLRKLLTDSREVPRSTITTLDPTQPSSAIQIPPTVDSASSVFTTWSQYIFVLILCLAILIINALIP", "length": 246 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "M0RD07-1", "protein_name": "Uncharacterized protein", "gene_name": "ENSRNOG00000064269", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MRMMAMQMMTNSISDAMERYKELIQVNSSYNIRQSQLLREQAQLKNNIQILLNEKRELLVEETELPASSVEAKRLCEEAGMNICDPRAKQQQV", "length": 93 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "M0RDP5-1", "protein_name": "Zinc finger protein 353", "gene_name": "Zfp353", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MDVAETPGASQTVPCNTQPSPVESSQLVSGQSSEMPTWKKTVMASACCNPQETACTQNSTAHPGKASDFYFGEPSETASFIQQVVSAEQKSSPAGSCLMNLSSTTKSCLSHPLKTEVLDTRKTLCNEGHWGRTLNSDKTLLIQITTMYESQWRTLGNHPVAPSGYHEGQAPNMDHLVDSVSNQTFIGDLEMEPSCNHVLYTDQFITSFSEQNPFGDQQRSPVADNRFYADQKILPNGYQTFYEPQMSTNYQITCVCGQNVCRCQEILLSGEHLLSEYQTSGYRYDQDLIVNLQVTSPIGGEPLHDSQIPNSNFDTTSCGTKRTTSSEEDNLAWHPETSLSSEETFLDQMRTSVDQNVYPSHNGTLKIEESLEPQVTSLSNQAPYVGESSDTSNSPLIQIQPQEISSASGLDQGQHPEIKLDLKTQSPVSLKNPHNSKRYCCTYQGCKKSYKKSQHLKDHMKKHTGVKPYMCNKPGCDWKFFRLVDLNRHKQKHSGERPYPCPMCNKNYSRFYYLKQHLRSHIQASPTTAT", "length": 530 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "M9MSI7-1", "protein_name": "Uncharacterized protein", "gene_name": "Dmel\\CG42818", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MFIHQREQLPFKHNEQDPNYLAPVIQKRKPMDKDPRNPLKRLKFLQEFPTQSSKGDLDDLKYPTQLEGRHDSPKYDKTFHTEIHANNETDSQELENIILEKNLQDSKTEFQENRASQPKNMHSFQIPEAIESHFNNKELQNENDLHKGLKQQYRSGSEQDKSGPENVREIASKLILQWAENQRSLLDSFVKAITDVLKVHDSKLNMKINISPRDIMILKDMLKQLLESIMQLREGSTSTRARIVLNKWIETQKSLIDSFSQAIQNTNQNVDNIANVYEVMENLNKNLRELVILLSDKESFPTTESSSSQQTTSIYATTTFYLTSSTFGSTHPIVDENINRVNIMGNLIKGLRNIMVQMDETNKTSSSTSYTTTESTYIQPSTSTYLNAEVTTSHPTTSTYEVTNIITDESKIKDMFNLIKGIEDLISQYNGKHKFTSTTSLTGKSNSREPTMTTYSSAGGITSHSFTTTSPKTVTTSSSHSTTESSPSHPTTSNYEVTVFDQDSHKFKVMKNLIKELKGLIEHFSDTKNITSTTYSTGDSKSFQPTATTPDSTDRSSSQPITFPESTTSTTNLQSTITNHLSTESTSSQLNTTLSITGTTTPNLTTSTHDFKDQINDDDSKSLKHLIKILSDLVYSLNDKNNIKSTSQLTTESTFNSSINITNSTTVASSTFSTTESMAIHSTPYLSTREITVFQFNDVENINPIISNNSTTVTTNIHSSTYTTSTTDNTTSYPNLSTTESSPTFDSTISHSNTSSQTRSLGSYKDKIKNIVELLKKLRKIQKTLADKSKGQLSPMLISRIKAVLKQIVAGNIDSVNGDSTELEILLSTTVNPNEDTTDLTMEKLLKLFDDFERMYNVLLDDSIQSTTQSTTQNNTIFSTTYSTIFSTTQSISTTSPTQYALTSSTPNTSTTSHSSTPSSINNLRSDESNNHQPIVDAIQQLKMALYHDFYAFKKSQEERMEKILQLLNGKPIDRRTKTIAKPRTIRKKVSREIQKRNSDVKEDKIHHYKADKFIKNPKNGNQDSHIPKPILNSARSKIKDVPLKLSAIKVNGGLKHLPSKRKANEEVSAMHEIFPEPVSILPHK", "length": 1085 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" }, { "uniprot_canonical_ac": "O08640-1", "protein_name": "Keratin-associated protein 14", "gene_name": "Krtap14", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSCNSCSGTFSQSFGGQLQYPISSCGSSYPNNVFYSTDLQTPITHQLGSSLHSGCQETFCEPTNCQTAYVVSRPCQRPFYSQRIRGPCRPCQSTFSGSLGFGSRGFQSFGCGYPSQGFGSHGFQSVGCGTPTFSSLNCGSSFYRPTCFSTKSCQSVSYQPTCGTGFF", "length": 167 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "O21032-1", "protein_name": "Large ribosomal subunit protein uL16m", "gene_name": "mrpl16", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKIPNRQKFTKNHKRNLITKETRKTGLVLGNYGIKATETGYLKMKQMERIKGDLVKKLKDNMDIYFNFYPLFGLTNKGTARMGAGKGEVSEWYVLVKKGSIVVEFIKSRMTAGAMQKVIRYSANKWPIKVRMTQIKQGLYEKKI", "length": 144 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "O21042-1", "protein_name": "Cytochrome c oxidase subunit 1+2", "gene_name": "2", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKILEIYDKQIAEKEGNIFIFISKWIISVDHKNIGTMYTNFSILAGIVGTLLSLVIRMELSTGNMLDGDGQQYNVIVTAHGLIMIFFVVMPAMLGGFANWFIPIMVGSPDVAFPRLNNISLWLIIVSFFLLLTSSCVGIGVGTGWTVYPPLSTMEYHPGHAVDVGILSLHIAGASSLLGAINFLTTVFNMKIAGLSWSKVSLFVWSILITAVLLVLSLPVLAGGLTMLITDRNFETTFFDPIGGGDPILYQHLFWFFGHPEVYILILPGFGLVSIILSKYSNKGIFGVKGMISAMSAIGFLGFLVWAHHMYTVGLDVDTRAYFTAATMIIAIPTGIKIFSWLATLWGGVIKITTPMLFVIGFLVLFTIGGLTGVVLANGGLDISLHDTYYVVAHFHYVLSMGAIFAIFAGYYYYYSIMNSTRLFGVVRYNEQLGRIHFWTMFIGVNVTFFPMHFLGLAGMPRRIGDYPDAYIGWNLIASYGSLITAFGLLFFVVNIFTPYIRRSVNIKNGAIILMGLDFARDWQIGFQDPATPIMEGIIDLHNYIFFYLIVVAVFIGWVMGRILWRFSYKWSYPTIGDIEIFKNFTAYNQIIHGTVIEIVWTLIPTVILYLIAIPSFTLLYAMDEIINPTVTIKIIGHQWYWSYEYGDNASNLIEFDSYMVYERDLAEGQLRLLEVDNAMVVPVKTHIRLIITSGDVLHSWAIPSFGIKVDAVPGRLNQIGLYVKREGTFYGQCSELCGVDHGFMPIKVQAVKLGEYFSKLNEK", "length": 764 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "O21049-1", "protein_name": "Cytochrome c oxidase subunit 3", "gene_name": "cox3", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKGFFENLFRQNVRSVINTGKKVGARAAAREIINQEWGYPLANHEVLFLTNVYQPKHMKRHPFHIVRGTVAPLAVTLPLGFFVLNYFGVISSKLGLLIALSSFIGGLVIWTISIIFDSLYDQQHTYEVKRGLVMGMMMFIISEVMFFFSFFWSYFYISLSPNIAIGCVWPPYGLTVYSYMGLPLLNTVLLLLSGAILTDGYTILTEQKAVHEKNEKVLAVEEAFKNLMNLYKTKNSINTLTFVDERRDKFFGKESRQEDKIAEQKLIAISAGVKELRDLDWDLYFFENPENIEPNYKEPTNLSVIEYALITIYLKKRNKVIKTRLYFTLLCAVVFLACQGYEYFFAPFSMNDGIYGSLFFLLTGFHGFHVLVGSILIGIITIRFIVGNFNLLNVGTNFQIYKNKSTGFACTLFYWHFVDIVWIFLYIVIYWWGSR", "length": 435 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "O23373-1", "protein_name": "Formin-like protein 3", "gene_name": "FH3", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MGRLRLAFLAISLVVFVCVSEEIFSRGGLNLLRFSVYGEDVAEQTWIHQNPRRKLISYPKKFSVSAPNLAFGPAPSFAPGPGPSFAPGPAPNPRSYDWLAPASSPNEPPAETPDESSPSPSEETPSVVAPSQSVPGPPRPPPQREKKDDILMKLIIAVASTAVLTFVFVALMFLCCFKRNCNNAVGSRDGPRDEGPLLRLSTGSTENSPTVASTSRKMFSVASSKKRSFLSRVSLKRNGHEFSTAESSSAAGLPPLKLPPGRSAPPPPPAAAPPPQPPPPPPPKPQPPPPPKIARPPPAPPKGAAPKRQGNTSSGDASDVDSETGAPKTKLKPFFWDKMANPDQKMVWHEISAGSFQFNEEAMESLFGYNDGNKNKNGQKSTDSSLRESPLQYIQIIDTRKAQNLSILLRALNVTTEEVVDAIKEGNELPVELLQTLLKMAPTSEEELKLRLYSGDLHLLGPAERFLKILVDIPFAFKRIESLLFMISLQEEVSGLKEALGTLEVACKKLRNSRLFLKLLEAVLKTGNRMNVGTFRGDAQAFKLDTLLKLSDVKGTDGKTTLLHFVVLEIIRSEGVRALRLQSRSFSSVKTDDSNADSSPQSVERYRSTGLQVVTGLTTELEDVKRAAIIDADGLAATLANISGSLTNAREFLKTMDEESDFERALAGFIERADADFKWLKEEEERIMVLVKSSADYFHGKSAKNEGLRLFAIVRDFLIMLEKVCREVKETTKTTNHSGKKESEMTTSDSNQPSPDFRQRLFPAIAERRMDSSDDSDDEEDSSPS", "length": 785 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O35698-1", "protein_name": "RNA-binding motif protein, Y chromosome", "gene_name": "Rbmy", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAETNQPGKIFIGGLNIKTRQKTLQEIFGRFGPVARVILMRDRETKKSRGFAFLTFRRLADAKNAVKEMNGVILDGKRIKVKQARRPSSLESGSKKRPPSFSRTRGASRILKCGRGGRSRARSGPSCEGNLGGDRYTPNFNVSSSGRHFAVKRNPSSKRDDPPSKRSATSAQTRSNTGLRGREPHRREISRNMPRGEPASSRRDEYPLPRDYGQSSNDRKYESTSRGYCDYGNYHSREESASKVFSDHAGYLGGRDRDFSEYLSGNSYRDTYRSYGRFHEAPSARGGNNRYDDYSNSQDGYGGRGEPYISNRSNIYSSDYERSGRQEVLPPPIDREYFDREGRQERGHSPKDGLYSASRESYSSNTKIWGIPWRSWRKQI", "length": 380 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "O60309-1", "protein_name": "Leucine-rich repeat-containing protein 37A3", "gene_name": "LRRC37A3", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MTSAQCPALACVMSPLRFWGPWPLLMWQLLWLLVKEAQPLEWVKDPLQLTSNPLGPPEPWSSHSSHFPRESPHAPTLPADPWDFDHLGPSASSEMPAPPQESTENLVPFLDTWDSAGELPLEPEQFLASQQDLKDKLSPQERLPVSPKKLKKDPAQRWSLAEIIGIIHQLSTPQSQKQTLQNEYSSTDTPYPGSLPPELRVKSDEPPGPSEQVGPSQFHLEPETQNPETLEDIQSSSLQQEAPAQLPQLLEEEPSSMQQEAPALPPESSMESLTLPNHEVSVQPPGEDQAYYHLPNITVKPADVEVTITSEPTNETESSQAQQETPIQFPEEVEPSATQQEAPIEPPVPPMEHELSISEQQQPVQPSESSREVESSPTQQETPGQPPEHHEVTVSPPGHHQTHHLASPSVSVKPPDVQLTIAAEPSAEVGTSLVHQEATTRLSGSGNDVEPPAIQHGGPPLLPESSEEAGPLAVQQETSFQSPEPINNENPSPTQQEAAAEHPQTAEEGESSLTHQEAPAQTPEFPNVVVAQPPEHSHLTQATVQPLDLGFTITPESMTEVELSPTMKETPTQPPKKVVPQLRVYQGVTNPTPGQDQAQHPVSPSVTVQLLDLGLTITPEPTTEVGHSTPPKRTIVSPKHPEVTLPHPDQVQTQHSHLTRATVQPLDLGFTITPKSMTEVEPSTALMTTAPPPGHPEVTLPPSDKGQAQHSHLTQATVQPLDLELTITTKPTTEVKPSPTTEETSTQLPDLGLAIIPEPTTETGHSTALEKTTAPRPDRVQTLHRSLTEVTGPPTELEPAQDSLVQSESYTQNKALTAPEEHKASTSTNICELCTCGDEMLSCIDLNPEQRLRQVPVPEPNTHNGTFTILNFQGNYISYIDGNVWKAYSWTEKLILRENNLTELHKDSFEGLLSLQYLDLSCNKIQSIERHTFEPLPFLKFINLSCNVITELSFGTFQAWHGMQFLHKLILNHNPLTTVEDPYLFKLPALKYLDMGTTLVPLTTLKNILMMTVELEKLIVPSHMACCLCQFKNSIEAVCKTVKLHCNSACLTNTTHCPEEASVGNPEGAFMKVLQARKNYTSTELIIEPEEPSDSSGINLSGFGSEQLDTNDESDVTSTLSYILPYFSAVNLDVKSLLLPFIKLPTTGNSLAKIQTVGKNRQRLNRVLMGPRSIQKRHFKEVGRQSIRREQGAQASVENTAEEKRLGSPAPRELKQPHTQQGPEKLAGNAVYTKPSFTQEHKAAVSVLKPFSKGAPSTSSPAKALPQVRDRWKDLTHAISILESAKARVTNMKTSKPIVHSRKKYRFHKTRSRMTHRTPKVKKSPKVRKKSYLSRLMLSNRLPFSAAKSLINSPSQGAFSSLRDLSPQENPFLEVSAPSEHFIENNNTKDTTARNAFEENVFMENTNMPEGTISENTNYNHPPEADSAGTAFNLGPTVKQTETKWEYNNVGTDLSPEPKSFNYPLLSSPGDQFEIQLTQQLQSVIPNNNVRRLIAHVIRTLKMDCSGAHVQVTCAKLVSRTGHLMKLLSGQQEVKASKIEWDTDQWKTENYINESTEAQSEQKEKSLEFTKELPGYGYTKKLILALIVTGILTILIILLCLIEICCHRRSLQEDEEGFSRDSEAPTEEESEALP", "length": 1634 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "O80489-1", "protein_name": "small monomeric GTPase", "gene_name": "SARA1A", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MFLFDWFYGILASLGLCKKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKINFKAFDLGGHQIARRVWKDCYAKVDAVVYLVDAYDRDRFVESKRELDALLSDEALANVPCLILGNKIDIPYASSEDELRYYLGLTNFTTGKGIVNLEDSGVRPLEVFMCSIVRKMGYGEGFKWLSQYIK", "length": 193 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O80614-1", "protein_name": "RING-type E3 ubiquitin transferase", "gene_name": "", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MSSDMRDERFFYHRYLSVTNRTTPTTATNLPTSTSNMRSTSLMTPRVAHTSMSSGGDFPDDRFFHARHQSATDRAASNRSRAIMPISTTNVPSSTSNSPRVLQTSMSRRGTSPMSSSTRRSVQASMSARETVPSSTSTRSMQTSTSTPEIMPTSSRNVITSSEEVANTFTQTSYIQFGSLWETNTTPSTRSWPTVPSSNSPRVLQTSMSRRGTSPMSSSTRRNVQSSMSGRETVSSSTSTSSMQTSMSTPEIMPTSSRNVITRSEEVANTFSTQTPYIQFGRLWETNTTSSTRSRTTVPTSTTNVPSSNSSRVLQTSMSTRGTFPMSSSTRMSVQASMLAPGTVSSSMSTVEIMPTSARNMITMSEEVANSFTQTSYIQFGSLWETFKTVTKLSRVAMVENGECVICLEEWRKETYVTSSTSNMRTSSLMTLTRFIDEQISLRATVSSTRTTARLLTNESPATIRAVAMLPRVAMVEKGECVICFEEWSKSDMETELPCKHKYHLECVEKWLKIHTSCPQCRYKLSCVYKSFLML", "length": 535 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O81153-1", "protein_name": "Proteasome subunit beta type-3-B", "gene_name": "PBC2", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDHLFIGLSGLATDVQTLYQRLVFRHKLYQLREERDMKPETFASLVSAILYEKRFGPFLCQPVIAGLGDDNKPFICTMDSIGAKELAKDFVVSGTASESLYGACEAMFKPDMEAEELFETISQALLSSVDRDCLSGWGGHVYVVTPKEVKERILKGRMD", "length": 204 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P00757-1", "protein_name": "Kallikrein 1-related peptidase-like b4", "gene_name": "Klk1b4", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MWFLILFLALSLGGIDAAPPVQSQVDCENSQPWHVAVYRFNKYQCGGVLLDRNWVLTAAHCYNDKYQVWLGKNNFLEDEPSDQHRLVSKAIPHPDFNMSLLNEHTPQPEDDYSNDLMLLRLSKPADITDVVKPITLPTEEPKLGSTCLASGWGSTTPIKFKYPDDLQCVNLKLLPNEDCDKAHEMKVTDAMLCAGEMDGGSYTCEHDSGGPLICDGILQGITSWGPEPCGEPTEPSVYTKLIKFSSWIRETMANNP", "length": 256 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P01241-1", "protein_name": "Somatotropin", "gene_name": "GH1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MATGSRTSLLLAFGLLCLPWLQEGSAFPTIPLSRLFDNAMLRAHRLHQLAFDTYQEFEEAYIPKEQKYSFLQNPQTSLCFSESIPTPSNREETQQKSNLELLRISLLLIQSWLEPVQFLRSVFANSLVYGASDSNVYDLLKDLEEGIQTLMGRLEDGSPRTGQIFKQTYSKFDTNSHNDDALLKNYGLLYCFRKDMDKVETFLRIVQCRSVEGSCGF", "length": 217 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P02762-1", "protein_name": "Major urinary protein 6", "gene_name": "Mup6", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKMLLLLCLGLTLVCVHAEEASSTGRNFNVEKINGEWHTIILASDKREKIEDNGNFRLFLEQIHVLENSLVLKFHTVRDEECSELSMVADKTEKAGEYSVTYDGFNTFTIPKTDYDNFLMAHLINEKDGETFQLMGLYGREPDLSSDIKERFAQLCEEHGILRENIIDLSNANRCLQARE", "length": 180 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P04071-1", "protein_name": "Kallikrein 1-related peptidase b16", "gene_name": "Klk1b16", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MWFLILFLALSLGGIDAAPPVQSRIVGGFKCEKNSQPWQVAVYYHKEHICGGVLLDRNWVLTAAHCYVDECEVWLGKNQLFQEEPSAQNRLVSKSFPHPGFNMTLLTFEKLPPGADFSNDLMLLRLSKPADITDVVKPIDLPTKEPKLDSTCLVSGWGSITPTKWQKPDDLQCMFTKLLPNENCAKAYLLKVTDVMLCTIEMGEDKGPCVGDSGGPLICDGVLQGTVSIGPDPCGIPGVSAIYTNLVKFNSWIKDTMMKNA", "length": 261 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P04644-1", "protein_name": "Small ribosomal subunit protein eS17", "gene_name": "Rps17", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGRVRTKTVKKAARVIIEKYYTRLGNDFHTNKRVCEEIAIIPSKNLRNKIAGYVTHLMKRIQRGPVRGISIKLQEEERERRDNYVPEVSALDQEIIEVDPDTKEMLKLLDFGSLSNLQVTQPTVGMNFKTPRGAV", "length": 135 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P05817-1", "protein_name": "Prestalk D11 protein", "gene_name": "ampA", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MLNKLILLLILSSCLVLSVKSEVNVDCSLVRCAQPICKPHYRLNMTDSCCGRCEPCTDVACTLQVKYCQDGEVPTGCCPCTLPPTKPDCSLVKCARPVCKPYYRLNMTDSCCGRCEPCTGVACTLQIKYCKDGEVPTGCCPCTPQPTKKPDCSKVPCPKILKYCQEGELPTGCCPCTPQPTKKPDCSRVPCPKILKYCKEGELPTGCCPCTPQPTKKPDCSDVMCTMDIRYCKNGELPTGCCPCTPQETKVPDCSKAMCTMDIKYCKPGEKPFGCCPCRENLTQ", "length": 284 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "P06325-1", "protein_name": "T-cell receptor gamma chain V region 5/10-13", "gene_name": "Tcrg-V1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLLLRWPTFCCLWVFGLGQLEQTELSVTRATDESAQISCIVSLPYFSNTAIHWYRQKAKKFEYLIYVSTNYNQRPLGGKNKKIEASKDFQTSTSTLKINYLKKEDEATYYCAVCRSGTSWVKIFAKGTKLVVIPP", "length": 135 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P06349-1", "protein_name": "Histone H1t", "gene_name": "H1-6", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSETAPAASSTLVPAPVEKPATKRRGKKPGMATARKPRGFSVSKLIPEALSMSQERAGMSLAALKKALAAAGYDVEKNNSRIKLALKRLVNKGVLVQTKGTGASGSFKLSKKAASGNDKGKGKKSASAKAKKLGLSRASRSPKSSKTKVVKKPKATPTKGSGSRRKTKGAKGLQQRKSPAKARATNSNSGKSKMVMQKTDLRKAAGRK", "length": 208 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P07628-1", "protein_name": "Kallikrein 1-related peptidase b8", "gene_name": "Klk1b8", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MRFLILFLALSLGGIDAAPPLQSRVVGGFNCEKNSQPWQVAVYDNKEHICGGVLLERNWVLTAAHCYVDQYEVWLGKNKLFQEEPSAQHRLVSKSFPHPGFNMSLLTLKEIPPGADFSNDLMLLRLSKPADITDAVKPITLPTKESKLGSTCLASGWGSITPTKWQKPDDLQCVFLKLLPIKNCIENHNVKVTDVMLCAGEMSGGKNICKGDSGGPLICDSVLQGITSTGPIPCGKPGVPAMYTNLIKFNSWIKDTMTKNS", "length": 261 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P07647-1", "protein_name": "Submandibular glandular kallikrein-9", "gene_name": "Klk9", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MWFLILFLALSLGQIDAAPPGQSRVVGGYNCETNSQPWQVAVIGTTFCGGVLIDPSWVITAAHCYSKNYRVLLGRNNLVKDEPFAQRRLVSQSFQHPDYIPVFMRNHTRQRAYDHNNDLMLLHLSKPADITGGVKVIDLPTEEPKVGSICLASGWGMTNPSEMKLSHDLQCVNIHLLSNEKCIETYKNIETDVTLCAGEMDGGKDTCTGDSGGPLICDGVLQGLTSGGATPCAKPKTPAIYAKLIKFTSWIKKVMKENP", "length": 259 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P08932-1", "protein_name": "T-kininogen 2", "gene_name": "", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MKLITILLLCSRLLPSLAQEEGAQEMDCNDETVFQAVDTALKKYNAELESGNQFLLYRVTEGTKKDGAETLYSFKYQIKEGNCSVQSGLTWQDCDFKDAEEAATGECTTTLGKKENKFSVATQICNITPGKGPKKTEEDLCVGCFQPIPMDSSDLKPVLKHAVEHFNNNTKHTHLFALTEVKSAHSQVVAGMNYKIIYSIVQTNCSKEDFPFLREDCVPLPYGDHGECRGHTYVDIHNTIAGFSQSCDLYPGDDLFSLLPKKCFGCPKNIPVDSPELKEALGHSIAQLNAQHNHLFYFKIDTVKKATSQVVAGTKYVIEFIARETNCSKQTNTELTADCETKHLGQSLNCNANVYMRPWENKVVPTVRCQALDMMISRPPGFSPFRLVQVQETKEGTTRLLNSCEYKGRLSKAGAGPAPDHQAEASTVTP", "length": 430 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P0C0S7-1", "protein_name": "Histone H2A.Z", "gene_name": "H2az1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAGGKAGKDSGKAKTKAVSRSQRAGLQFPVGRIHRHLKSRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDSLIKATIAGGGVIPHIHKSLIGKKGQQKTV", "length": 128 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P0C2B7-1", "protein_name": "Large ribosomal subunit protein mL52", "gene_name": "MRPL52", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MAALGMLLSTGVRRLHCGSAARAGSQWRLRQGLAANPSGYGPLTELPDWSYADGRPAPPMKGQLRRKAQREKFARRVVLLSQEMDAGLQAWQLRQQEKLQEEKRKQQNALKPKGVLLQNPGPSQ", "length": 124 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "P0C644-1", "protein_name": "Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 1", "gene_name": "Ppip5k1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MWSLTANEDEDESATAHFFLGAGDEGLGTCGIGMRTGESDSELLEDEEDEVPPEPQIIVGICAMTKKSKSKPMTQILERLCRFDYLTVVILGEDVILNEPVENWPPCHCLISFHSKGFPLDKAVAYSKLRNPFLINDLTMQYYIQDRREVYRILQEEGIDLPRYAVLNRDPACPEECNLIEGEDQVEVNGAVFPKPFVEKPVSAEDHNVYIYYPSSAGGGSQRLFRKIGSRSSVYSPESSVRKTGSYIYEEFMPTDGTDVKVYTVGPDYAHAEARKSPALDGKVERDSEGKEVRYPVMLTAMEKLVARKVCVAFKQTVCGFDLLRANGHSFVCDVNGFSFVKNSMKYYDDCAKILGNTIMRELAPQFQIPWSIPTEAEDIPIVPTTSGTMMELRCVIAIIRHGDRTPKQKMKMEVTHPRFFALFEKHGGYKTGKLKLKRPEQLQEVLDITRLLLAELEKEPGAEIEEKTGKLEQLKSVLEMYGHFSGINRKVQLTYYPHGVKASSEGQDLQREPPAPSLLLVLKWGGELTPDGRVQAEELGRAFRCMYPGGQGDYAGFPGCGLLRLHSTFRHDLKIYASDEGRVQMTAAAFAKGLLALEGELTPILVQMVKSANMNGLLDSDSDSLSSCQHRVKARLHHILQQDAPFGPEDYDQLAPTGSTSLLNSMSVIQNPVKVCDQVFALIENLTHQIRERMQDPSSVDLQLYHSETLELMLQRWSKLERDFRQKSGRYDISKIPDIYDCVKYDVQHNGSLGLQGTAELLRLSKALADVVIPQEYGISREEKVEIAVGFCLPLLRKILLDLQRTHEDESVNKLHPLYSRGVLSPGRHVRTRLYFTSESHVHSLLSVFRYGGLLDETKDAQWQRALAYLSAISELNYMTQIVIMLYEDNTRDPLSEERFHVELHFSPGVKGVEEGSAPAGCGFRPASSENEEMKTDPGSIENLCPAKPSDEPDRALQTSPQPVEGTGLPRRSPLIRNRKAGSMEVLSETSSSRPGGYRLFSSSRPPTEMKQSGLGSQCTGLFSTTVLGGSSSAPNLQDYARTHGKKLPPAGLKHRDELLFVPAVKRFSVSFAKHPTNGFEGCSMVPTIYPLETLHNALSLRQVSEFLTKVCQRHTDAHAQASAALFDSMHNHQASDNPFSPPRTLHSPPLQLRHRSEKPPWYSSGPSSTVSSAGPSSPTTVDGNSHFGFSDQSSVNTQMIEEKQGLGLLQETPGDGTPEFHIELAESTQSPQEPPVEISPPGSQDDTEVNQTCQEVPDTIQPCHDILEEIGQPNQEVPDISQLLLKNHDTATNTCQPCQASQLSKKVYEEICQLCQDNPEESNQLCQEVSVELGRMVHRFPVSIGSTTQETLMEIGRPTQEIPEEPCQEFSEKVGMLTQKASAISELSQDILETDNPSQELSEETDLQAQEVSEEIDQEPEVVDELSNEDIS", "length": 1434 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P0C7H9-1", "protein_name": "Inactive ubiquitin carboxyl-terminal hydrolase 17-like protein 7", "gene_name": "USP17L7", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MEDDSLYLGGDWQFNHFSKLTSSRLDAAFAEIQRTSLSEKSPLSSETRFDLCDDLAPVARQLAPREKLPLSSRRPAAVGAGLQKIGNTFYVNVSLQCLTYTLPLSNYMLSREDSQTCHLHKCCMFCTMQAHITWALHSPGHVIQPSQVLAAGFHRGEQEDAHEFLMFTVDAMKKACLPGHKQLDHHSKDTTLIHQIFGAYWRSQIKYLHCHGVSDTFDPYLDIALDIQAAQSVKQALEQLVKPKELNGENAYHCGLCLQKAPASKTLTLPTSAKVLILVLKRFSDVTGNKLAKNVQYPKCRDMQPYMSQQNTGPLVYVLYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASGITSVLSQQAYVLFYIQKSEWERHSESVSRGREPRALGAEDTDRPATQGELKRDHPCLQVPELDEHLVERATQESTLDHWKFPQEQNKTKPEFNVRKVEGTLPPNVLVIHQSKYKCGMKNHHPEQQSSLLNLSSTKPTDQESMNTGTLASLQGSTRRSKGNNKHSKRSLLVCQ", "length": 530 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P0CW02-1", "protein_name": "Lymphocyte antigen 6C1", "gene_name": "Ly6c1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDTSHTTKSCVLILLVALLCAERAQGLQCYECYGVPIETSCPAVTCRASDGFCIAQNIELIEDSQRRKLKTRQCLSFCPAGVPIRDPNIRERTSCCSEDLCNAAVPTAGSTWTMAGVLLFSLSSVVLQTLL", "length": 131 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P0DKL4-1", "protein_name": "Spliceosome-associated protein 130 A", "gene_name": "SAP130A", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MYLYSLTLQQATGIVCAINGNFSGGKTQEIAVARGKILDLLRPDENGKIQTIHSVEVFGAIRSLAQFRLTGAQKDYIVVGSDSGRIVILEYNKEKNVFDKVHQETFGKSGCRRIVPGQYVAVDPKGRAVMIGACEKQKLVYVLNRDTTARLTISSPLEAHKSHTICYSLCGVDCGFDNPIFAAIELDYSEADQDPTGQAASEAQKHLTFYELDLGLNHVSRKWSNPVDNGANMLVTVPGGADGPSGVLVCAENFVIYMNQGHPDVRAVIPRRTDLPAERGVLVVSAAVHKQKTMFFFLIQTEYGDVFKVTLDHNGDHVSELKVKYFDTIPVASSICVLKLGFLFSASEFGNHGLYQFQAIGEEPDVESSSSNLMETEEGFQPVFFQPRRLKNLVRIDQVESLMPLMDMKVLNIFEEETPQIFSLCGRGPRSSLRILRPGLAITEMAVSQLPGQPSAVWTVKKNVSDEFDAYIVVSFTNATLVLSIGEQVEEVNDSGFLDTTPSLAVSLIGDDSLMQVHPNGIRHIREDGRINEWRTPGKRSIVKVGYNRLQVVIALSGGELIYFEADMTGQLMEVEKHEMSGDVACLDIAPVPEGRKRSRFLAVGSYDNTVRILSLDPDDCLQILSVQSVSSAPESLLFLEVQASIGGDDGADHPANLFLNSGLQNGVLFRTVVDMVTGQLSDSRSRFLGLKPPKLFSISVRGRSAMLCLSSRPWLGYIHRGHFHLTPLSYETLEFAAPFSSDQCAEGVVSVAGDALRIFMIDRLGETFNETVVPLRYTPRKFVLHPKRKLLVIIESDQGAFTAEEREAARKECFEAGGVGENGNGNADQMENGADDEDKEDPLSDEQYGYPKAESEKWVSCIRVLDPKTATTTCLLELQDNEAAYSVCTVNFHDKEYGTLLAVGTVKGMQFWPKKNLVAGFIHIYRFVEDGKSLELLHKTQVEGVPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIISIQTYRDRIYVGDIQESFHYCKYRRDENQLYIFADDCVPRWLTASHHVDFDTMAGADKFGNVYFVRLPQDLSEEIEEDPTGGKIKWEQGKLNGAPNKVDEIVQFHVGDVVTCLQKASMIPGGSESIMYGTVMGSIGALHAFTSRDDVDFFSHLEMHMRQEYPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLPMDLQRKIADELDRTPAEILKKLEDARNKII", "length": 1214 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P0DKL6-1", "protein_name": "Spliceosome-associated protein 130 B", "gene_name": "SAP130B", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MYLYSLTLQQATGIVCAINGNFSGGKTQEIAVARGKILDLLRPDENGKIQTIHSVEVFGAIRSLAQFRLTGAQKDYIVVGSDSGRIVILEYNKEKNVFDKVHQETFGKSGCRRIVPGQYVAVDPKGRAVMIGACEKQKLVYVLNRDTTARLTISSPLEAHKSHTICYSLCGVDCGFDNPIFAAIELDYSEADQDPTGQAASEAQKHLTFYELDLGLNHVSRKWSNPVDNGANMLVTVPGGADGPSGVLVCAENFVIYMNQGHPDVRAVIPRRTDLPAERGVLVVSAAVHKQKTMFFFLIQTEYGDVFKVTLDHNGDHVSELKVKYFDTIPVASSICVLKLGFLFSASEFGNHGLYQFQAIGEEPDVESSSSNLMETEEGFQPVFFQPRRLKNLVRIDQVESLMPLMDMKVLNIFEEETPQIFSLCGRGPRSSLRILRPGLAITEMAVSQLPGQPSAVWTVKKNVSDEFDAYIVVSFTNATLVLSIGEQVEEVNDSGFLDTTPSLAVSLIGDDSLMQVHPNGIRHIREDGRINEWRTPGKRSIVKVGYNRLQVVIALSGGELIYFEADMTGQLMEVEKHEMSGDVACLDIAPVPEGRKRSRFLAVGSYDNTVRILSLDPDDCLQILSVQSVSSAPESLLFLEVQASIGGDDGADHPANLFLNSGLQNGVLFRTVVDMVTGQLSDSRSRFLGLKPPKLFSISVRGRSAMLCLSSRPWLGYIHRGHFHLTPLSYETLEFAAPFSSDQCAEGVVSVAGDALRIFMIDRLGETFNETVVPLRYTPRKFVLHPKRKLLVIIESDQGAFTAEEREAARKECFEAGGVGENGNGNADQMENGADDEDKEDPLSDEQYGYPKAESEKWVSCIRVLDPKTATTTCLLELQDNEAAYSVCTVNFHDKEYGTLLAVGTVKGMQFWPKKNLVAGFIHIYRFVEDGKSLELLHKTQVEGVPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIISIQTYRDRIYVGDIQESFHYCKYRRDENQLYIFADDCVPRWLTASHHVDFDTMAGADKFGNVYFVRLPQDLSEEIEEDPTGGKIKWEQGKLNGAPNKVDEIVQFHVGDVVTCLQKASMIPGGSESIMYGTVMGSIGALHAFTSRDDVDFFSHLEMHMRQEYPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLPMDLQRKIADELDRTPAEILKKLEDARNKII", "length": 1214 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P0DML3-1", "protein_name": "Chorionic somatomammotropin hormone 2", "gene_name": "CSH2", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MAAGSRTSLLLAFALLCLPWLQEAGAVQTVPLSRLFDHAMLQAHRAHQLAIDTYQEFEETYIPKDQKYSFLHDSQTSFCFSDSIPTPSNMEETQQKSNLELLRISLLLIESWLEPVRFLRSMFANNLVYDTSDSDDYHLLKDLEEGIQTLMGRLEDGSRRTGQILKQTYSKFDTNSHNHDALLKNYGLLYCFRKDMDKVETFLRMVQCRSVEGSCGF", "length": 217 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P0DMV2-1", "protein_name": "Cancer/testis antigen family 45 member A9", "gene_name": "CT45A9", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MTDKTEKVAVDPETVFKRPRECDSPSYQKRQRMALLARKQGAGDSLIAGSAMSKEKKLMTGHAIPPSQLDSQIDDFTGFSKDRMMQKPGSNAPVGGNVTSSFSGDDLECRETAFSPKSQQEINADIKRQLVKELRCVGQKYEKIFEMLEGVQGPTAVRKRFFESIIKEAARCMRRDFVKHLKKKLKRMI", "length": 189 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P0DOV1-1", "protein_name": "Interferon-activable protein 211", "gene_name": "Ifi211", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MVNEYKRIVLLRGLECINKHYFSLFKSLLARDLNLERDNQEQYTTIQIANMMEEKFPADSGLGKLIEFCEEVPALRKRAEILKKERSEVTGETSLEKNGQEAGPATPTSTTSHMLASERGETSATQEETSTAQAGTSTAQAGTSTAQAGTSTAQKRKSMREEETGVKKSKAAKEPDQPPCCEEPTAMCQSPILHSSSSASSNILSAKNQKSQPQNQNIPRGAVLHSEPLTVMVLTATDPFEYESPEHEVKNMFHATVATVSQYFHVKVFNIDLKEKFTKNNFITISNYFESKGILEINETSSVLEAAPKQMIEVPNCITRNANASPKICDIQKGTSGTVFYGVFTLHKKKVKTQNTSYEIKDGSGSIEVVGSGQWHNINCKEGDKLHLFCFHLKRERGQPKLVCGDHSFVKVTKAGKKKEASTVQ", "length": 425 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P0DTA3-1", "protein_name": "Speedy protein E11", "gene_name": "SPDYE11", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MGQILGKIMMSHQPQPQEERSPQRSTSGYPLQEVVDDEVSGPSAPGVDPSPPRRSLGWKRKRECLDESDDEPEKELAPEPEETWVAETLCGLKMKAKRRRVSLVLPEYYEAFNRLLEDPVIKRLLAWDKDLRVSDKYLLAMVIAYFSRAGLPSWQYQRIHFFLALYLANDMEEDDEAPKQNIFYFLYEETRSHIPLLSELWFQLCRYMNPRARKNCSQIALFRKYRFHFFCSMRCRAWVSLEELEEIQAYDPEHWVWARDRAHLS", "length": 265 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P0DUD3-1", "protein_name": "Speedy protein E14", "gene_name": "SPDYE14", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MGQILGKIMMSHQPQPQEERSPQRSTSGYPLQEVVDDEVLGPSAPGVDPSPPRRSLGWKRKRECLDESDDEPEKELAPEPEETWVAETLCGLKMKAKRRRVSLVLPEYYEAFNRLLEDPVIKRLLAWDKDLRVSDKYLLAMVIAYFSRAGLPSWQYQRIHFFLALYLANDMEEDDEAPKQNIFYFLYEETRSHIPLLSELWFQLCRYMNPRARKNCSQIALFRKYRFHFFCSMRCRAWVSLEELEEIQAYDPEHWVWARDRAHLS", "length": 265 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P0DUD4-1", "protein_name": "Speedy protein E15", "gene_name": "SPDYE15", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MGQILGKIMMSHQPQPQEERSPQRSTSGYPLQEVVDDEVLGPSAPGVDPSPPRRSLGWKRKRECLDESDDEPEKELAPEPEETWVAETLCGLKMKAKRRRVSLVLPEYYEAFNRLLEDPVIKRLLAWDKDLRVSDKYLLAMVIAYFSRAGLPSWQYQRIHFFLALYLANDMEEDDEAPKQNIFYFLYEETRSHIPLLSELWFQLCRYMNPRARKNCSQIALFRKYRFHFFCSMRCRAWVSLEELEEIQAYDPEHWVWARDRAHLS", "length": 265 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P0DW11-1", "protein_name": "TATA-box-binding protein-associated factor 11-like protein 6", "gene_name": "TAF11L6", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "METGRQTGVSAEMLAMPRGLKGSKKDGIPEDLDGNLEAPRDQEGELRSEDVMDLTEGDSEASASAPPAAKRRKTHTKGKKESKPTVDAEEAQRMTTLLSAMSEEQLSRYEVCRRSAFPRARVAGLMRAITGSSVSENAAIAMAGIAKLFVGEVVEEALDVCEMWGETPPLQPKHLREAVRRLKPKGLFPNSNCKRIMF", "length": 198 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P0DW12-1", "protein_name": "TATA-box-binding protein-associated factor 11-like protein 7", "gene_name": "TAF11L7", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "METGRQTGVSAEMLAMPRGLKGSKKDGIPEDLDGNLEAPRDQEGELRSEDVMDLTEGDSEASASAPPAAKRRKTHTKGKKESKPTVDAEEAQRMTTLLSAMSEEQLSRYEVCRRSAFPRARVAGLMRAITGSSVSENAAIAMAGIAKLFVGEVVEEALDVCEMWGETPPLQPKHLREAVRRLKPKGLFPNSNCKRIMF", "length": 198 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P0DW13-1", "protein_name": "TATA-box-binding protein-associated factor 11-like protein 8", "gene_name": "TAF11L8", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "METGRQTGVSAEMLAMPRGLKGSKKDGIPEDLDGNLEAPRDQEGELRSEDVMDLTEGDSEASASAPPAAKRRKTHTKGKKESKPTVDAEEAQRMTTLLSAMSEEQLSRYEVCRRSAFPRARVAGLMRAITGSSVSENAAIAMAGIAKLFVGEVVEEALDVCEMWGETPPLQPKHLREAVRRLKPKGLFPNSNCKRIMF", "length": 198 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P0DW14-1", "protein_name": "TATA-box-binding protein-associated factor 11-like protein 10", "gene_name": "TAF11L10", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "METGRQTGVSAEMLAMPRGLKGSKKDGIPEDLDGNLEAPRDQEGELRSEDVMDLTEGDSEASASAPPAAKRRKTHTKGKKESKPTVDAEEAQRMTTLLSAMSEEQLSRYEVCRRSAFPRARVAGLMRAITGSSVSENAAIAMAGIAKLFVGEVVEEALDVCEMWGETPPLQPKHLREAVRRLKPKGLFPNSNCKRIMF", "length": 198 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P11588-1", "protein_name": "Major urinary protein 1", "gene_name": "Mup1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKMLLLLCLGLTLVCVHAEEASSTGRNFNVEKINGEWHTIILASDKREKIEDNGNFRLFLEQIHVLENSLVLKFHTVRDEECSELSMVADKTEKAGEYSVTYDGFNTFTIPKTDYDNFLMAHLINEKDGETFQLMGLYGREPDLSSDIKERFAQLCEKHGILRENIIDLSNANRCLQARE", "length": 180 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P11589-1", "protein_name": "Major urinary protein 2", "gene_name": "Mup2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKMLLLLCLGLTLVCVHAEEASSTGRNFNVEKINGEWHTIILASDKREKIEDNGNFRLFLEQIHVLEKSLVLKFHTVRDEECSELSMVADKTEKAGEYSVTYDGFNTFTIPKTDYDNFLMAHLINEKDGETFQLMGLYGREPDLSSDIKERFAKLCEEHGILRENIIDLSNANRCLQARE", "length": 180 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P13255-1", "protein_name": "Glycine N-methyltransferase", "gene_name": "Gnmt", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MVDSVYRTRSLGVAAEGIPDQYADGEAARVWQLYIGDTRSRTAEYKAWLLGLLRQHGCHRVLDVACGTGVDSIMLVEEGFSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLDKDVPAGDGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVIDHRNYDYILSTGCAPPGKNIYYKSDLTKDITTSVLTVNNKAHMVTLDYTVQVPGAGRDGAPGFSKFRLSYYPHCLASFTELVQEAFGGRCQHSVLGDFKPYRPGQAYVPCYFIHVLKKTG", "length": 293 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P13675-1", "protein_name": "Y-linked testis-specific protein 1", "gene_name": "Ssty1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSSLMKKRRRKSSSNTLRNIVSCRISHSWKEGNEPVTQWKAIVLDQLPTNPSLYFVKYDGIDSIYVLELYSDDRILNLKVLPPIVVFPQVRDAHLARALVGRAVQHKFERKDGSEVNWRGVVLAQVPIMKDLFYITYKKDPALYAYQLLDDYKEGNLHMIPDTPPAEERSGDDSDVLIGNWVEYTRKDGSKKFGKVVYQVLANPSVYFIKFHGDIHIYVYTMVPKILEVEKS", "length": 232 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P15515-1", "protein_name": "Histatin-1", "gene_name": "HTN1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MKFFVFALVLALMISMISADSHEKRHHGYRRKFHEKHHSHREFPFYGDYGSNYLYDN", "length": 57 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P16374-1", "protein_name": "Zinc finger protein 60", "gene_name": "Zfp60", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MANSSSQHMVCGSVTFRDVAVDFSQEEWACLDATQKVLYRNIMLETYSNLVAVVGRCIPKPDLIVLLEPEKEPWMAVKKETGRPSQGLETGFEAENRSPKNHVYNKKLPKQTIQQLSKTSDVQGVSVSNGPGYSVIKEPQNYQEGDANRNITNKKEMSTYTSKTLAHNKEKPYKCKDCGKCFGCKSNLHQHESIHTGEKPYECKDCGKTFRLPQMLSRHQKSHSDERPFECNICGKSFHLPTLLQYHKNIHTGLKPFECEECGKSFKSFNRISTLFQHRTIHAGMKPYKCNVCGKAFNRRSNLLQHQKIHSEDRPFHCKVCGKAFTVLAQLTRHENIHTEDKSFECKQCGKIFSNGSYLLRHYDTHTNEKPFECNICGKAFRLHLYLSEHQKTHTDEKPFKCKLCESAFRRKYQLSEHQRIHTDGKPYQCKDCWEFFRRRSNFIEHQSIHTGKKPFECKDCGKVFRLNIHLIRHQRFHSDEKPFECKECGKAFHFSSQLNNHKTSHTGQTPFECKECGKSFKRVSSLVEHRIIHSGVKPYKCNACGRAFNRRSNLMQHEKIHSDERPFECKDCGKAFTVLAQLTRHQTIHNGKKSYECEQCGSAFRLPYQLTQHQRIHYDVKPFQCKECGRAFVRSTGLRIHERIHTGEKPFQCKECGEAFQYHYQFLGHFRIHTGKNPYECSECGKYFTYGRDLKVHQSIHNLEKP", "length": 707 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P20816-1", "protein_name": "Cytochrome P450 4A2", "gene_name": "Cyp4a2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGFSVFSPTRSLDGVSGFFQGAFLLSLFLVLFKAVQFYLRRQWLLKALEKFPSTPSHWLWGHNLKDREFQQVLTWVEKFPGACLQWLSGSTARVLLYDPDYVKVVLGRSDPKPYQSLAPWIGYGLLLLNGKKWFQHRRMLTPAFHYDILKPYVKIMADSVSIMLDKWEKLDDQDHPLEIFHYVSLMTLDTVMKCAFSHQGSVQLDVNSRSYTKAVEDLNNLIFFRVRSAFYGNSIIYNMSSDGRLSRRACQIAHEHTDGVIKTRKAQLQNEEELQKARKKRHLDFLDILLFAKMEDGKSLSDEDLRAEVDTFMFEGHDTTASGISWVFYALATHPEHQERCREEVQSILGDGTSVTWDHLDQMPYTTMCIKEALRLYSPVPSVSRELSSPVTFPDGRSIPKGIRVTILIYGLHHNPSYWPNPKVFDPSRFSPDSPRHSHAYLPFSGGARNCIGKQFAMNELKVAVALTLLRFELLPDPTRIPVPMPRLVLKSKNGIHLRLKKLR", "length": 504 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P21571-1", "protein_name": "ATP synthase peripheral stalk subunit F6, mitochondrial", "gene_name": "Atp5pf", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MTVQRIFRLSSVLRSAVSVHLRRNIGVTAVAFNKELDPVQKLFLDKIREYKAKRLASGGPVDTGPEYQQEVDRELFKLKQMYGKGEMDKFPTFNFEDPKFEVLDKPQS", "length": 108 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P22237-1", "protein_name": "NADH-ubiquinone oxidoreductase subunit 9", "gene_name": "nad9", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKDYKNELKVKINLGEHLRLSIPGLVKKIMYKTHYLEIQVEKEKMLTVLKYLKEASKYQCNMLLDIVCVDCLNIEEIKIGRFKLIYVLNSIYNNTRVHLSTYVENNGIIETTSGLFESSVWLEREIWDMFGIYFEKHPDLRRILTDYGFVGYPLKKDFPITGYLEVYYDVNDKKIIYKPIELMQEYRNYNFGAVWGDYERKVYLENIIK", "length": 209 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "P22283-1", "protein_name": "Cystatin-related protein 2", "gene_name": "Crp2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MYKTLCGTQLLLAIFVLFLNFSHATAKGTRGPMEIFKKNFMEKNKLNDVYDIFKFLYNKFSHDTYLSNIKNQSFTMNTWGFGEIEVVKTKCRKIDSDFYKCSFQWEFCNIKRTPGVTIYYITLPGSVRCRKLLSKLVNCPFEEQTEQLKREICYFQLYPDYIEQNIRSVRFNCYTK", "length": 176 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P23266-1", "protein_name": "Olfactory receptor 1f45", "gene_name": "Or1f45", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSSTNQSSVTEFLLLGLSRQPQQQQLLFLLFLIMYLATVLGNLLIILAIGTDSRLHTPMYFFLSNLSFVDVCFSSTTVPKVLANHILGSQAISFSGCLTQLYFLAVFGNMDNFLLAVMSYDRFVAICHPLHYTTKMTRQLCVLLVVGSWVVANMNCLLHILLMARLSFCADNMIPHFFCDGTPLLKLSCSDTHLNELMILTEGAVVMVTPFVCILISYIHITCAVLRVSSPRGGWKSFSTCGSHLAVVCLFYGTVIAVYFNPSSSHLAGRDMAAAVMYAVVTPMLNPFIYSLRNSDMKAALRKVLAMRFPSKQ", "length": 313 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P24049-1", "protein_name": "Large ribosomal subunit protein uL22", "gene_name": "Rpl17", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MVRYSLDPENPTKSCKSRGSNLRVHFKNTRETAQAIKGMHIRKATKYLKDVTLKKQCVPFRRYNGGVGRCAQAKQWGWTQGRWPKKSAEFLLHMLKNAESNAELKGLDVDSLVIEHIQVNKAPKMRRRTYRAHGRINPYMSSPCHIEMILTEKEQIVPKPEEEVAQKKKISQKKLKKQKLMARE", "length": 184 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P24868-1", "protein_name": "G2/mitotic-specific cyclin-1", "gene_name": "CLB1", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MSRSLLVENSRTINSNEEKGVNESQYILQKRNVPRTILGNVTNNANILQEISMNRKIGMKNFSKLNNFFPLKDDVSRADDFTSSFNDSRQGVKQEVLNNKENIPEYGYSEQEKQQCSNDDSFHTNSTALSCNRLIYSENKSISTQMEWQKKIMREDSKKKRPISTLVEQDDQKKFKLHELTTEEEVLEEYEWDDLDEEDCDDPLMVSEEVNDIFDYLHHLEIITLPNKANLYKHKNIKQNRDILVNWIIKIHNKFGLLPETLYLAINIMDRFLCEEVVQLNRLQLVGTSCLFIASKYEEIYSPSIKHFAYETDGACSVEDIKEGERFILEKLDFQISFANPMNFLRRISKADDYDIQSRTLAKFLMEISIVDFKFIGILPSLCASAAMFLSRKMLGKGTWDGNLIHYSGGYTKAKLYPVCQLLMDYLVGSTIHDEFLKKYQSRRFLKASIISIEWALKVRKNGYDIMTLHE", "length": 471 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P25389-1", "protein_name": "Probable serine/threonine-protein kinase KCC4", "gene_name": "KCC4", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MTVANTETHSAAKPSSTIGPWKLGETLGFGSTGKVQLAQHERTGHRTAVKVISKSIFNNNGNHSNDDSVLPYNIEREIVIMKLLSHPNVLSLYDVWETNNNLYLILEYAEKGELFNLLVDHGPLPEREAINCFRQIIIGISYCHALGIVHRDLKPENLLLDSFYNIKIADFGMAALQTDADLLETSCGSPHYAAPEIVSGLPYEGFASDVWSCGVILFALLTGRLPFDEENGNVRDLLLKVQKGQFEMPNDTEISRDAQDLIGKILVVDPRQRIKIRDILSHPLLKKYQTIKDSKSIKDLPRENTYLYPLADSNNHTSASIDDSILQNLVVLWHGRHADDIVSKLKENGTNKEKILYALLYRFKLDSVRGSNKKNRNKIKKTKKNKRSSTLSSSSSLLLNNRSIQSTPRRRTSKRHSREFSSSRKRSSFLLSSNPTDSSPIPLRSSKRITHINVASANTQATPSGVPNPHKRNSKKRSSKRLSYMPNTKRSSLTSKSLSNFTNLIDDDDWEYIEKDAKRTSSNFATLIDEIFEPEKFELAKREKAELQRKVQEAKRQSVNAQKINEDEFGSEVSDGMKELKKINDKVSSPLINYEFSQQELLQDIDTLLTNRYQLSSYTRPISRLDPGLTPVTETLPNNLKEKTALLQDTEKKIIETIRRSKFLGSLLNVRGGLSPGKSELAPIEESPIVSTTPLIYNDRMEPRRISDVEVPHFTRKSKHFTTANNRRSVLSLYAKDSIKDLNEFLIKEDPDLPPQGSTDNESRSEDPEIAESITDSRNIQYDEDDSKDGDNVNNDNILSDFPQGVGISQEYDMKDKNPNQSPISKSAEPTLVVKLPSLSSFQGKNASGLGLYQREPSKVTLPSLTSNNSSVGENIEDGAEKGTESEKIAASLSDDDLKEDNDKKDNDTVNAPTTVKKPPNSVLLKKFSKGKILELEIHAKIPEKRLYEGLHKLLEGWKQYGLKNLVFNITNMIITGKLVNDSILFLRSTLFEIMVLPNGDGRSLIKFNKKTGSTKTLTKLATEIQIILQKEGVLDK", "length": 1037 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P28312-1", "protein_name": "Alpha-defensin 5", "gene_name": "Defa5", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKTFVLLSALVLLAFQVQADPIHKTDEETNTEEQPGEEDQAVSISFGGQEGSALHEELSKKLICYCRIRGCKRRERVFGTCRNLFLTFVFCCS", "length": 93 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P28742-1", "protein_name": "Kinesin-like protein KIP1", "gene_name": "KIP1", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MARSSLPNRRTAQFEANKRRTIAHAPSPSLSNGMHTLTPPTCNNGAATSDSNIHVYVRCRSRNKREIEEKSSVVISTLGPQGKEIILSNGSHQSYSSSKKTYQFDQVFGAESDQETVFNATAKNYIKEMLHGYNCTIFAYGQTGTGKTYTMSGDINILGDVQSTDNLLLGEHAGIIPRVLVDLFKELSSLNKEYSVKISFLELYNENLKDLLSDSEDDDPAVNDPKRQIRIFDNNNNNSSIMVKGMQEIFINSAHEGLNLLMQGSLKRKVAATKCNDLSSRSHTVFTITTNIVEQDSKDHGQNKNFVKIGKLNLVDLAGSENINRSGAENKRAQEAGLINKSLLTLGRVINALVDHSNHIPYRESKLTRLLQDSLGGMTKTCIIATISPAKISMEETASTLEYATRAKSIKNTPQVNQSLSKDTCLKDYIQEIEKLRNDLKNSRNKQGIFITQDQLDLYESNSILIDEQNLKIHNLREQIKKFKENYLNQLDINNLLQSEKEKLIAIIQNFNVDFSNFYSEIQKIHHTNLELMNEVIQQRDFSLENSQKQYNTNQNMQLKISQQVLQTLNTLQGSLNNYNSKCSEVIKGVTEELTRNVNTHKAKHDSTLKSLLNITTNLLMNQMNELVRSISTSLEIFQSDSTSHYRKDLNEIYQSHQQFLKNLQNDIKSCLDSIGSSILTSINEISQNCTTNLNSMNVLIENQQSGSSKLIKEQDLEIKKLKNDLINERRISNQFNQQLAEMKRYFQDHVSRTRSEFHDELNKCIDNLKDKQSKLDQDIWQKTASIFNETDIVVNKIHSDSIASLAHNAENTLKTVSQNNESFTNDLISLSRGMNMDISSKLRSLPINEFLNKISQTICETCGDDNTIASNPVLTSIKKFQNIICSDIALTNEKIMSLIDEIQSQIETISNENNINLIAINENFNSLCNFILTDYDENIMQISKTQDEVLSEHCEKLQSLKILGMDIFTAHSIEKPLHEHTRPEASVIKALPLLDYPKQFQIYRDAENKSKDDTSNSRTCIPNLSTNENFPLSQFSPKTPVPVPDQPLPKVLIPKSINSAKSNRSKTLPNTEGTGRESQNNLKRRFTTEPILKGEETENNDILQNKKLHQ", "length": 1111 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P29314-1", "protein_name": "Small ribosomal subunit protein uS4", "gene_name": "Rps9", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MPVARSWVCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRPGRVKRKNAKKGQGGAGAGDDEEED", "length": 194 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P33579-1", "protein_name": "Prolactin-8A5", "gene_name": "Prl8a5", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MELALSQPSFFGTLLMLVVSNLLLWEKAASIPACMVEDGGCWDPLREAFNSATQRAETLRNLSDQLYVEFFQNQFSSRQFADLSSQLIRKDETVLKAGTYCHSNRAKPKSRGVNIDIEEYLKMSINFCGFMDQPLFHLVIELSAMEGVPETILSKAKDLEENNRQLLDDLRWILTKVFPTAEIKEEFPSWDYLSFLKSSNKNHKFLAIFNLSSCLDYDTQVHYTLSQILNCLITGKDC", "length": 238 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P36006-1", "protein_name": "Myosin-3", "gene_name": "MYO3", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MAVIKKGARRKDVKEPKKRSAKIKKATFDANKKKEVGISDLTLLSKISDESINENLKKRFKNGIIYTYIGHVLISVNPFRDLGIYTNAVLESYKGKNRLEVPPHVFAIAESMYYNLKSYNENQCVIISGESGAGKTEAAKRIMQYIAAASNSHSESIGKIKDMVLATNPLLESFGCAKTLRNNNSSRHGKYLEIKFNSQFEPCAGNITNYLLEKQRVVGQIKNERNFHIFYQFTKGASDTYKQMFGVQMPEQYIYTAAAGCTTADTIDDVKDYEGTLEAMRTIGLVQEEQDQIFRMLAAILWIGNISFIENEEGNAQVGDTSVTDFVAYLLQVDASLLVKCLVERIMQTSHGMKRGSVYHVPLNPVQATAVRDALAKAIYNNLFDWIVDRVNVSLQAFPGADKSIGILDIYGFEIFEHNSFEQICINYVNEKLQQIFIQLTLKAEQETYEREKIKWTPIKYFDNKVVCDLIEAKNPPGILAAMNDSIATAHADSNAADQAFAQRLNLFNSNPYFELRANKFVIKHYAGDVTYDINGITDKNKDQLQKDLIELIGTTTNTFLSTIFPDDVDKDSKRRPPTAGDKIIKSANELVETLSKAEPSYIRTIKPNQTKSPNDYDDHQVLHQVKYLGLQENVRIRRAGFAYRQTFEKFVERFYLLSPDCSYAGDYTWDGDTLEAVKLILRDAMIPEKEFQLGVTSVFIKTPESLFALEDMRDKYWYNMAARIQRAWRRFLQRRIDAAIKIQRTIREKKGGNKYVKLRDYGTKLLAGKKERRSMSLLGYRAFMGDYLSCNESKTKGSYIRRQVGIKDKVVFSIKGECLHSKFGRSAQRLKKVFILTKKTFYIIGQTREQNAMKYTQDYKIDVGKIKQVSLTNLQDDWMGVILVNSTQSDPLINTPFKTELMTRLKKLNEKIMIKVGPTIEYHKQPNKLHTVRSKISDSAPKYGDIYKSSTIYVRRGHPANSKSNKKPKNPGGLSGKPIKSKKSKHKSTHKHTHSHRSHRDAAKKQPLPSQKPVNPLSLAATAAQAAYNPKPDKTVPIKSSAIPAAKVSSKHSSKPSSKEKVAVKKASSSHKSSSAKQNQVSMPPSKGVEKNKEPLKETTATATANIPIPPPPPPMGQPKDPKFEAAYDFPGSGSSSELPLKKGDIVFISRDEPSGWSLAKLLDGSKEGWVPTAYMTPYKDTRNTVPVAATGAVNDVTNQKSSQIDNTISSAQEGVQFGSATVGPTSDNQSNPVGTFSDGLASALAARANKMRAESADDDDNDDGDDDDDW", "length": 1272 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P36046-1", "protein_name": "Mitochondrial intermembrane space import and assembly protein 40", "gene_name": "MIA40", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MLRNLVVRNACRNRPSIQVARGLCRHQTRRLMASSPQFGRNSNQEKTAGFIMGILSMAGALYFIAPNRKPLFASRKVESDKTAEEELSSGGEQSPENEDDNNSKSDENGDDNDSKNDETEAGPQLGGDKIGASKVAEDGELVVLAEEDNKSSEDKDTDESKVSTKDDEQSNEDNATANNQKDENISSENSEENTSDKTLDNNAGSSEKKDPEHSDDEKSQQGQSDDKTTTEDNNGEEESSKKTVSDSENSAKQSESSDEEKEELRKQEEKQMGPTEEEVQHEGAYNPDTGEINWDCPCLGGMAHGPCGEEFKSAFSCFVYSEAEPKGIDCVEKFQHMQDCFRKYPEHYAEQLKETSDDEEPQDKVKVNTIESAPNVSSAKENAAKKAEQSDVKKEPLNEESKP", "length": 403 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P37106-1", "protein_name": "Signal recognition particle subunit SRP54 1", "gene_name": "SRP-54A", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MVLAELGGRITRAIQQMNNVTIIDEKVLNDFLNEITRALLQSDVSFGLVEKMQTNIKKIVNLDDLAAGHNKRLIIEQAIFKELCRMLDPGKPAFAPKKAKPSVVMFVGLQGAGKTTTCTKYAYYHQKKGYKAALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVKIAVEGVDRFKKEKCDLIIVDTSGRHKQAASLFEEMRQVAEATEPDLVIFVMDSSIGQAAFEQAEAFKETVSVGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGKGDWSGLVDKLQEVVPKDLQNELVENLSQGNFTLRSMYDQFQCSLRIPLNQLFSMLPGISAEMMPKGHGEESRVKMKRYMTMMDSMTNKELDSPNPKIFNESRIMRIARGSGRLVREVMEMLEEYKRIAKTMKGIKIPKNGDMSKVIPPQMLKQMGGMSGLQSLMKQMGSAKDMMGMFGGGGK", "length": 479 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P38150-1", "protein_name": "Inactive deaminase YBR284W", "gene_name": "", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MVQNNESVFFVECDSYKESPSTSPIRLDDLDGNDAVSDQGLAFDGDVGITSQARVRNPRAQIFEDSNTDVVLHLDDLDMVPLNTKFDMQMEMGSPMAMPAETPPPVEPLKTKDLAYSSLAHLPSYFFEQTHFRIDRKCLLEMSKLRRNYLTISKQDALSCPQLHSRVAGGYLKPVKEKLFGIRHFLDLEESNTVNLLQDGNYMTELFNSQINIPTFKEFREDFEWCLKIIRDRSLSRFSEKRLQYLVNKFPVFQHLHSKEEMRQSKKVPHKDFYNCRKIDLNLLLSGCFSQWQLTEFIWTKLRKEPDRVIHQAFNGSHITLSQLFKVNFEETGQFFNGLKIIDDSFLEWYKVIYLAKYHLVNDEMEIHTGSHGKQLRYYLIAKTFLEFDNYINGEYLAELLKTFLIKPQEESKYQLCQLSVDFQFYLHYDNSDVDNWWMVFANWLNHYNIFSNNIRWNIRISRIYPELYHTGKVKNFQEYLNLIFKPLFNAENYLHKSLGPILLKFLSQVSSIDLCIQDTDNYIWKNFTAVSCLPKDWTSGGDNPTISQYMYYVYVNLTKLNHIRQALHQNTFTLRSSCSPTSMNRTSQFSNTLNFTEHTEAILNNFLLACGGFLNAENLWNAPPSLVYLFYLSQIPMVVAPLNSIVDSKPTMLQEQAPTGLVLEPSKPYKKNPFMKFFEMGFKISLSSESILYNNSYTKEPIIEEYSVAASIYRLHSADLCELLRNSVITSGFSSTLKNKWLGVSLASHDYFVENTGFVDKWYDCKPNTSLEHNVPIIRRQYRSSTLAGEWRLIIA", "length": 797 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P40002-1", "protein_name": "Transcriptional regulator MIT1", "gene_name": "MIT1", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MDIEPTFKGYIEDEDDALLILQATLDGKLKHIPRRPYEIERPYLIVSGSIFVFIEEISGIKRWTDGVSWSPSRISGKFLIYKELDKENAGSNANATSSGSTDSAVITDGTSGARNNPSSSKIKLPPLKNHQFDLPPTMGHSSFESEQDTSISPSNRSNLPLKYTGLVKKTISVKLKRPPFNSIENLHIVSYYSVKDIKQNCLVTPKASPFLKDVRPSQELIVAMGNTTLGNVKNNSTTTGNGPNNINNKSNSSTPLNTVISTNNNSANINAAGSNQFTSANKNYYYKNDESSGYPITQFAPALPSTTLMYTANPPYITQSPDNTNATGMNTHVNNNNNNSNNSSNSNNSNNNNNNNNNNNNNNNNNINNINNVNTNAGNGNNPNRFHNASFAYNTTGDFINPQQQGQISYPFYYTTIPINNPNYYTTQPPNPVTNASTNENQGYSTSSTQHPYYGHPTESQSASAAAGATGTPGTAENVLPVSSMQPLLHQANNNSASSATSTAPYPVYSMNVNVPYYNSSASAYKRAQENTTSNTNAEPSGATSTNSGTMLSNPAYANSQYTPSQVYYQGFPQYAMASAQNPSMYQHQHQHPLPTVYPIATPQQNIMSSGHTLSTIGSDPQHHHYQQEPNDHKNFAMGHANNNILNITNNDTMNNLNTNTSTTTQ", "length": 666 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P42222-1", "protein_name": "Enolase-related protein 3", "gene_name": "ERR3", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MSITKVHARTVYDSRGNPTVEVEITTENGLFRAIVPSGASTGIHEAVELRDGNKSEWMGKGVTKAVSNVNSIIGPALIKSDLCVTNQKGIDELMISLDGTSNKSRLGANAILGVSLCVARAAAAQKGITLYKYIAELADARQDPFVIPVPFFNVLNGGAHAGGSLAMQEFKIAPVGAQSFAEAMRMGSEVYHHLKILAKEQYGPSAGNVGDEGGVAPDIDTAEDALDMIVKAINICGYEGRVKVGIDSAPSVFYKDGKYDLNFKEPNSDPSHWLSPAQLAEYYHSLLKKYPIISLEDPYAEDDWSSWSAFLKTVNVQIIADDLTCTNKTRIARAIEEKCANTLLLKLNQIGTLTESIEAANQAFDAGWGVMISHRSGETEDPFIADLVVGLRCGQIKSGALSRSERLAKYNELLRIEEELGDDCIYAGHRFHDGNKL", "length": 437 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P43356-1", "protein_name": "Melanoma-associated antigen 2", "gene_name": "MAGEA2", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MPLEQRSQHCKPEEGLEARGEALGLVGAQAPATEEQQTASSSSTLVEVTLGEVPAADSPSPPHSPQGASSFSTTINYTLWRQSDEGSSNQEEEGPRMFPDLESEFQAAISRKMVELVHFLLLKYRAREPVTKAEMLESVLRNCQDFFPVIFSKASEYLQLVFGIEVVEVVPISHLYILVTCLGLSYDGLLGDNQVMPKTGLLIIVLAIIAIEGDCAPEEKIWEELSMLEVFEGREDSVFAHPRKLLMQDLVQENYLEYRQVPGSDPACYEFLWGPRALIETSYVKVLHHTLKIGGEPHISYPPLHERALREGEE", "length": 314 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P43357-1", "protein_name": "Melanoma-associated antigen 3", "gene_name": "MAGEA3", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MPLEQRSQHCKPEEGLEARGEALGLVGAQAPATEEQEAASSSSTLVEVTLGEVPAAESPDPPQSPQGASSLPTTMNYPLWSQSYEDSSNQEEEGPSTFPDLESEFQAALSRKVAELVHFLLLKYRAREPVTKAEMLGSVVGNWQYFFPVIFSKASSSLQLVFGIELMEVDPIGHLYIFATCLGLSYDGLLGDNQIMPKAGLLIIVLAIIAREGDCAPEEKIWEELSVLEVFEGREDSILGDPKKLLTQHFVQENYLEYRQVPGSDPACYEFLWGPRALVETSYVKVLHHMVKISGGPHISYPPLHEWVLREGEE", "length": 314 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P43537-1", "protein_name": "Uncharacterized membrane protein YFL067W", "gene_name": "", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MESIILSIAIFIGVLLGTSVGAGSGSSISPDVDAGSGSRTSPDVDAGSGSRISAGVGTFSGSSTSPDVDAGSGSSTSPDVGAGSGSSISAGVGSRIGTGIGSRIGTGIGTGIGSRISTSIGSRISPDVGTSSGNRISTGVSTGISTTMNARVAVLITAAILSAPVTAIALLEARR", "length": 175 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P46162-1", "protein_name": "Beta-defensin 4", "gene_name": "DEFB4", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MRLHHLLLAVLFLVLSAGSGFTQRVRNPQSCRWNMGVCIPFLCRVGMRQIGTCFGPRVPCCRR", "length": 63 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "P46169-1", "protein_name": "Beta-defensin 11", "gene_name": "DEFB11", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MRLHHLLLALLFLVLSAGSGISGPLSCRRNGGVCIPIRCPGPMRQIGTCFGRPVKCCRSW", "length": 60 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "P47102-1", "protein_name": "ARF guanine-nucleotide exchange factor 1", "gene_name": "GEA1", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MHDVPMETVLAVNPATMIVKECINLCSAMNKQSRDKSQTSVAALLGGGSDIFLSQSDSFVDSFHNLPTSSYHDPLISGLVQLRLKINDLKGLDSLNALELLKPFLEIVSASSVSGYTTSLALDSLQKVFTLKIINKTFNDIQIAVRETVVALTHCRFEASKQISDDSVLLKVVTLLRDIITSSFGDYLSDTIIYDVLQTTLSLACNTQRSEVLRKTAEVTIAGITVKLFTKLKLLDPPTKTEKYINDESYTDNNLKDDIIGTTTSDNDLSSTDDDSAVADDNKNEKPVQQVIREQENDEETAEKAENVEPNYGITVIKDYLGLLLSLVMPENRMKHTTSAMKLSLQLINAAIEISGDKFPLYPRLFSLISDPIFKSVLFIIQSSTQYSLLQATLQLFTSLVVILGDYLPMQIELTLRRIFEILEDTTISGDVSKQKPPAIRELIIEQLSILWIHSPAFFLQLFVNFDCNLDRSDLSIDFIKELTKFSLPAAAVNTSNNIPPICLEGVLSLIENIYNDLQRFDRAEFVKNQKEIDILKQRDRKTEFILCVETFNEKAKKGIQMLIEKGFIDSDSNRDIASFLFLNNGRLNKKTIGLLLCDPKKTSLLKEFIDLFDFKGLRVDEAIRILLTKFRLPGESQQIERIVEAFSSKYSADQSNDKVELEDKKAGKNGSESMTEDDIIHVQPDADSVFVLSYSIIMLNTDSHNPQVKDHMTFDDYSNNLRGCYNGKDFPRWYLHKIYTSIKVKEIVMPEEHHGNERWFEDAWNNLISSTSVMTEMQRDFTNPISKLAQIDILQYEKAIFSNVRDIILKTLFKIFTVASSDQISLRILDAISKCTFINYYFSFDQSYNDTVLHLGEMTTLAQSSAKAVELDVDSIPLVEIFVEDTGSKISVSNQSIRLGQNFKAQLCTVLYFQIIKEISDPSIVSTRLWNQIVQLILKLFENLLMEPNLPFFTNFHSLLKLPELPLPDPDISIRKAKMSRSLLSTFASYLKGDEEPSEEDIDFSIKAFECVKASHPLSSVFENNQLVSPKMIETLLSSLVIEKTSENSPYFEQELLFLLEISIILISEASYGQEFGALIADHMINISNLDGLSKEAIARLASYKMFLVSRFDNPRDILSDLIEHDFLVKNEIFNTKYYESEWGKQVINDLFTHLNDVKYNERALKNVKFWNFLRILISAKDRQFAVYTFLEKYIQNGDIFVDDGNFMNILSLLDEMSCAGAVGTKWEQNYENSVEDGCEAPESNPYRSIIDLSSRSINITADLLSTVGRSNSALNKNEIIAAIQGLAHQCLNPCDELGMQALQALENILLSRASQLRTEKVAVDNLLETGLLPIFELDEIQDVKMKRITSILSVLSKIFLGQLVEGVTSNETFLRVLNVFNKYVDDPTVERQLQELIISKREIEKE", "length": 1408 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P53563-1", "protein_name": "Bcl-2-like protein 1", "gene_name": "Bcl2l1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSQSNRELVVDFLSYKLSQKGYSWSQFSDVEENRTEAPEETEPERETPSAINGNPSWHLADSPAVNGATGHSSSLDAREVIPMAAVKQALREAGDEFELRYRRAFSDLTSQLHITPGTAYQSFEQVVNELFRDGVNWGRIVAFFSFGGALCVESVDKEMQVLVSRIASWMATYLNDHLEPWIQENGGWDTFVDLYGNNAAAESRKGQERFNRWFLTGMTVAGVVLLGSLFSRK", "length": 233 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P56840-1", "protein_name": "Protein TCL1B1", "gene_name": "Tcl1b1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAAAAFDPLGPLPVYLVSVRLGIYEDEHHRVWIVANVETSHSSHGNRRRTHVTVHLWKLIPQQVIPFNPLNYDFLPTTWKLESRNIYWATDGTHWRLLDHSQLGDTEQLILMLVLG", "length": 116 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P56841-1", "protein_name": "Protein TCL1B2", "gene_name": "Tcl1b2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAAAGFYPPRLLPQVLISTGPGFYEDEHHRLWMVAKLETCSHSPYCNKIETCVTVHLWQMTRYPQEPAPYNPMNYNFLPMTWRLASMNTYRGTDAMHWRLLNHSQVGDTVQLILMLE", "length": 117 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P56842-1", "protein_name": "Protein TCL1B3", "gene_name": "Tcl1b3", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MADSVHFPWMPFPPRFLVCTRDDIYEDENGRQWVVAKVETSRSPYGSRIETCITVHLQHMTTIPQEPTPQQPINNNSLPTMWRLESMNTYTGTDGTYWRLLDHSQMGDTLQLILDIVICEVD", "length": 122 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P56844-1", "protein_name": "Protein TCL1B4", "gene_name": "Tcl1b4", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MADSVRFPCMPFPPCFLVCTRDDIYEDEHGRQWVAAKVETSSHSPYCSKIETCVTVHLWQMTTLFQEPSPDSLKTFNFLPRTWRLESRNTYRGADAMHWRLVNHSQFYGTEELVLMLDSR", "length": 120 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P59528-1", "protein_name": "Taste receptor type 2 member 123", "gene_name": "Tas2r123", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFSQKINYSHLFTFSITLYVEIVTGILGHGFIALVNIMDWVKRRRISSVDQILTALALTRFIYVLSMLICILLFMLCPHLPRRSEMLSAMGIFWVVNSHFSIWLTTCLGVFYFLKIANFSNSFFLYLKWRVKKVILIIILASLIFLTLHILSLGIYDQFSIAAYVGNMSYSLTDLTQFSSTFLFSNSSNVFLITNSSHVFLPINSLFMLIPFTVSLVAFLMLIFSLWKHHKKMQVNAKQPRDVSTMAHIKALQTVFSFLLLYAIYLLFLIIGILNLGLMEKIVILIFDHISGAVFPISHSFVLILGNSKLRQASLSVLPCLRCQSKDMDTMGL", "length": 333 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P61314-1", "protein_name": "Large ribosomal subunit protein eL15", "gene_name": "Rpl15", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGAYKYIQELWRKKQSDVMRFLLRVRCWQYRQLSALHRAPRPTRPDKARRLGYKAKQGYVIYRIRVRRGGRKRPVPKGATYGKPVHHGVNQLKFARSLQSVAEERAGRHCGALRVLNSYWVGEDSTYKFFEVILIDPFHKAIRRNPDTQWITKPVHKHREMRGLTSAGRKSRGLGKGHKFHHTIGGSRRAAWRRRNTLQLHRYR", "length": 204 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P62246-1", "protein_name": "Small ribosomal subunit protein uS8", "gene_name": "Rps15a", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVRFLTVMMKHGYIGEFEIIDDHRAGKIVVNLTGRLNKCGVISPRFDVQLKDLEKWQNNLLPSRQFGFIVLTTSAGIMDHEEARRKHTGGKILGFFF", "length": 130 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P62425-1", "protein_name": "Large ribosomal subunit protein eL8", "gene_name": "Rpl7a", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MPKGKKAKGKKVAPAPAVVKKQEAKKVVNPLFEKRPKNFGIGQDIQPKRDLTRFVKWPRYIRLQRQRAILYKRLKVPPAINQFTQALDRQTATQLLKLAHKYRPETKQEKKQRLLARAEKKAAGKGDVPTKRPPVLRAGVNTVTTLVENKKAQLVVIAHDVDPIELVVFLPALCRKMGVPYCIIKGKARLGRLVHRKTCTTVAFTQVNSEDKGALAKLVEAIRTNYNDRYDEIRRHWGGNVLGPKSVARIAKLEKAKAKELATKLG", "length": 266 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P62802-1", "protein_name": "Histone H4", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG", "length": 103 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "P62963-1", "protein_name": "Profilin-1", "gene_name": "Pfn1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAGWNAYIDSLMADGTCQDAAIVGYKDSPSVWAAVPGKTFVSITPAEVGVLVGKDRSSFFVNGLTLGGQKCSVIRDSLLQDGEFTMDLRTKSTGGAPTFNVTVTMTAKTLVLLMGKEGVHGGLINKKCYEMASHLRRSQY", "length": 140 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P62982-1", "protein_name": "Ubiquitin-ribosomal protein eS31 fusion protein", "gene_name": "Rps27a", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGAKKRKKKSYTTPKKNKHKRKKVKLAVLKYYKVDENGKISRLRRECPSDECGAGVFMGSHFDRHYCGKCCLTYCFNKPEDK", "length": 156 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P70709-1", "protein_name": "Eosinophil cationic protein", "gene_name": "Rnase3", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGLKLLESRLCLLLSLGLVLMLASCQPPTPSQWFEIQHIYNRAYPRCNDAMRHRNRFTGHCKDINTFLHTSFASVVGVCGNRNIPCGNRTYRNCHNSRYRVSITFCNLTTPARIYTQCRYQTTRSRKFYTVGCDPRTPRDSPMYPVVPVHLDRIF", "length": 155 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P81278-1", "protein_name": "Prolactin-releasing peptide", "gene_name": "Prlh", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MALKTWLLCLLLLSLVLPGASSRAHQHSMETRTPDINPAWYTGRGIRPVGRFGRRRATPRDVTGLGQLSCLPLDGRTKFSQRG", "length": 83 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P83883-1", "protein_name": "Large ribosomal subunit protein eL42", "gene_name": "Rpl36a", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MVNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQVIQF", "length": 106 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P83884-1", "protein_name": "Large ribosomal subunit protein eL42", "gene_name": "RPL36A", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MVNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQVIQF", "length": 106 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "P97876-1", "protein_name": "Basic leucine zipper transcriptional factor ATF-like 3", "gene_name": "Batf3", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSQGPPAGGVLQSSVAAPGNQPQSPKDDDRKVRRREKNRVAAQRSRKKQTQKSDKLHEEHESLEQENSVLRREIAKLKEELRHLTEALKEHEKMCPLLLCPMNFVQLRPDPVASWSAHDAPDHPSFIWLGTLV", "length": 133 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q00729-1", "protein_name": "Histone H2B type 1-A", "gene_name": "H2bc1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MPEVSAKGTTISKKGFKKAVTKTQKKEGRKRKRCRKESYSIYIYKVLKQVHPDTGISSKAMSIMNSFVTDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSSK", "length": 127 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q01534-1", "protein_name": "Testis-specific Y-encoded protein 1", "gene_name": "TSPY1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MRPEGSLTYRVPERLRQGFCGVGRAAQALVCASAKEGTAFRMEAVQEGAAGVESEQAALGEEAVLLLDDIMAEVEVVAEEEGLVERREEAQRAQQAVPGPGPMTPESAPEELLAVQVELEPVNAQARKAFSRQREKMERRRKPHLDRRGAVIQSVPGFWANVIANHPQMSALITDEDEDMLSYMVSLEVGEEKHPVHLCKIMLFFRSNPYFQNKVITKEYLVNITEYRASHSTPIEWYPDYEVEAYRRRHHNSSLNFFNWFSDHNFAGSNKIAEILCKDLWRNPLQYYKRMKPPEEGTETSGDSQLLS", "length": 308 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q03764-1", "protein_name": "Ethanolamine kinase", "gene_name": "EKI1", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MYTNYSLTSSDAMPRTYLVGTASPEMSKKKRQSANCDKPTRRVIHIIDTNEHSEVDLKNELPITCTNEDGEMTSSSWTSQTANDFLKLAYVNAKLDPSLPSQYFKQDIINVLQSLEIPGWSVPGSKESSLNKNLLTLTQIKGALTNVIYKIHYPNLPPLLMRIFGDSIDSVIDREYELKVIARLSFYDLGPKLEGFFENGRFEKYIEGSRTSTQADFIDRDTSIKIAKKLKELHCTVPLTHKEITDQPSCWTTFDQWIKLIDSHKEWVSNNVNISENLRCSSWNFFLKSFKNYKRWLYNDSAFTSKLLREDDKDSMINSGLKMVFCHNDLQHGNLLFKSKGKDDISVGDLTIIDFEYAGPNPVVFDLSNHLNEWMQDYNDVQSFKSHIDKYPKEEDILVFAQSYINHMNENHVKIASQEVRILYNLIIEWRPCTQLFWCLWALLQSGRLPQRPLIEGEKLMSEKAGLGDETHLMEHKNKENGKYDCSEDDSFNYLGFCKEKMSVFWGDLITLGVIDKDCPDIGKTDYLDTKLIF", "length": 534 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "Q04902-1", "protein_name": "Probable glutathione-independent glyoxalase SNO4", "gene_name": "SNO4", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MTPKRALISLTSYHGPFYKDGAKTGVFVVEILRSFDTFEKHGFEVDFVSETGGFGWDEHYLPKSFIGGEDKMNFETKNSAFNKALARIKTANEVNASDYKIFFASAGHGALFDYPKAKNLQDIASKIYANGGVIAAICHGPLLFDGLIDIKTTRPLIEGKAITGFPLEGEIALGVDDILRSRKLTTVERVANKNRAKYLAPIHPWDDYSITDGKLVTGVNANSSYSTTIRAINALYS", "length": 237 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "Q0D2J5-1", "protein_name": "Zinc finger protein 763", "gene_name": "ZNF763", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MDPVACEDVAVNFTQEEWALLDISQRKLYREVMLETFRNLTSIGKKWKDQNIEYEYQNPRRNFRSLIEGNVNEIKEDSHCGETFTQVPDDRLNFQEKKASPEAKSCDNFVCGEVGIGNSSFNMNIRGDIGHKAYEYQDYAPKPYKCQQPKKAFRYHPSFRTQERNHTGEKPYACKECGKTFISHSGIRRRMVMHSGDGPYKCKFCGKAVHCLRLYLIHERTHTGEKPYECKQCVKSFSYSATHRIHERTHTGEKPYECQQCGKAFHSSSSFQAHKRTHTGGKPYECKQCGKSFSWCHSFQIHERTHTGEKPCECSKCNKAFRSYRSYLRHKRSHTGEKPYQCKECRKAFTYPSSLRRHERTHSAKKPYECKQCGKALSYKFSNTPKNALWRKTL", "length": 394 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q0WX57-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase 17-like protein 24", "gene_name": "USP17L30", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MEDDSLYLRGEWQFNHFSKLTSSRPDAAFAEIQRTSLPEKSPLSCETRVDLCDDLAPVARQLAPREKLPLSSRRPAAVGAGLQNMGNTCYVNASLQCLTYTPPLANYMLSREHSQTCHRHKGCMLCTMQAHITRALHNPGHVIQPSQALAAGFHRGKQEDAHEFLMFTVDAMKKACLPGHKQVDHHSKDTTLIHQIFGGYWRSQIKCLHCHGISDTFDPYLDIALDIQAAQSVQQALEQLVKPEELNGENAYHCGVCLQRAPASKTLTLHTSAKVLILVLKRFSDVTGNKIAKNVQYPECLDMQPYMSQPNTGPLVYVLYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASSITSVLSQQAYVLFYIQKSEWERHSESVSRGREPRALGAEDTDRRATQGELKRDHPCLQAPELDEHLVERATQESTLDHWKFLQEQNKTKPEFNVRKVEGTLPPDVLVIHQSKYKCGMKNHHPEQQSSLLNLSSSTPTHQESMNTGTLASLRGRARRSKGKNKHSKRALLVCQ", "length": 530 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q1LYG5-1", "protein_name": "Elongation factor 2a.1", "gene_name": "eef2a.1", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MENFNVDQIRATMDKKSNIRNMSVIGAFDHGKSTLTDWLVSEAGIVSSARAGETRFMDTRRDEQERCITIKSTAISIFYELAEKDLAFIKECKDGSGFLLNLIDSPGHVDFSSEVTAALRITDGALLVVDCVSGVCLQTETVLRQAIGERIKPVLMINKMDRALLELQLVPEELYQIFQRIVEKVNVTISTYAEDEKGPMGNVMIDPVIGNLAFGSGLHGWAFTLKQFAELYVKKFAGKAQLGPEEYIKKVEDMIKRLWGDSYFDSTTGKFSESATSPDGKKLPRTFVHLVLDPIFKVFDAIMNFKKEETVKLIEKMGIKLDVEDKEKEGKILLKAVMRCWLPAGEALLQMITIHLPSPVTAQIYRCELLYEGPGDDEAAMGIKNCDPKAPLMMYISKMIPTSDKGCFYAFGRVFSGCVSTGLNVRIMGPNFTPGKKDDLYLKPIQRTVLMMGRYVEPIEDVPCGNIVGLLGVDQFLVKTGTITTFTKAYNMRVMKFSVSPVVRVSVEVMDPADLPKLVEGLKHLAKSDPMLQCIIEDTGEHIIAGAGELHLEICLKDLEEDHACIPLKKSDPFASYRETVSDGSKQLCLAKTPNKHSRLFMKACPLADGLAEDIDKGRVTASQEMNARAQYLAENYKWEVTEARKIWCFGPEGTGPNILVDLTKRVQYLNEIKDSVIAGFQWATREGVLCAENMRGIRFDIHDATLTSTAIHRGPGQIIVATRRVLYGCQLTAEPRLSEPIYLVEMQCPESVIGNVYGELVRRRGVVFSESQVMGTPVYLLKAYLPVSESFGFTADLCANTSGQAFSQCVFDHWQILPGDPMDPTSKVAHIMADIRKSKGLDEAIPALHCYLD", "length": 854 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q1PEY5-1", "protein_name": "Probable 3-hydroxyisobutyryl-CoA hydrolase 2", "gene_name": "", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MASHSQVLVEEKSSVRILTFNRPKQLNALSFHMVSRLLQLFLAYEEDPSVKLVVLKGQGRAFSAGGDIPPIVRDILQGKLIRGAHYFKVGYTLNYVLSTYRKPQVSILNGIVMGGGAGLSTNGRFRIATENTVFAMPETALGLFPDVGASYFLSRLPGFFGEYVGLTGARLDGAEMLACGLATHFVPSISLTALEAELYKVGSSNQTFISTILDAYAEYPHLNQHSSYHRLDVIDRCFSKRTVEEIFSALEREVTQKPNDWLLATIQALEKASPSCLKISLRSIREGRLQGVGQCLIREYRMVCHVMKGDISKDFVEGCRAVLIDKDRNPKWQPRRLEDVTDSMVDQYFERVEDEEGWEDLKFPPRNNLPALAIAAKL", "length": 378 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q1ZXA5-1", "protein_name": "ADP-ribosylation factor-like protein DDB_G0292332", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MDFIISFIKNLFGFLTIKKVMILGVENVGKTTLLYNIYKFYSENITTTTLSSLPIPIPTNGFNVESIVIEQVKFDIWDIGGKETNRICYRHYLTSEIDSIIFVFDSSDINSLEESKKEYQYLKNQISLKNVPFLLVANKQDLKQQTIEIDEILKTYFDKSSINETILMSQNNNDDLIKCINWIFSN", "length": 186 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q1ZXJ4-1", "protein_name": "Acetyl-coenzyme A transporter 1", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MLFTLLKRHFGNELNNIVWLVLLYLIQGIPIGLSFGTIPFLLHKHATYTQIGIFTISTYPYSLKLLWSPIVDSYFVQSFGRRKSWIVPIQILAGIVFITISFFIETLLEHAETKIIYITIVFFLLIFLMATQDIAVDAWALTILSKPYLHYASTCQTIGLNTGYFLSYTIFLTLSSPKFANKFLRSVPSEEGIITLPGYLQFWGILFIILSIYLAFFKDEESTTITTTTTRHDNYNNNNNDDKNKQVKSKIENESIESKSMRSSPSSLSPSLLSSPVKKQNKKNKQHISIDKKDITIIKENNENNEIIDNNNSNNNYDNGKKSIVQETYGMDISESDLTPKQVYYLLWKIITLPHIKILSILFIISKIVFQPNESALNLKLLEKGLRKEDIASFSLIQFPSIIIFSIISSKWVKNKPLTIWSNAYLVGVFFILVNMCSVFYFPNLNGGEISWSHFFLLLMISLFSSFSYNLMSVSQGSFFLKISDKSIGGTYVTLLNTIANFAGTYPKLFILMLIDKLTTSECIVNISNDNSSSSSSSSSLISTSSNNLTTTTTIIQEQQQQVIIHDNISKELCAEQNGKYRIERDGYYLVATGAIIYGVFIYFVLKRYLTPIEKLKL", "length": 618 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q23888-1", "protein_name": "Large ribosomal subunit protein uL2m", "gene_name": "mrpl2", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MVLNWRGVKSRLYSGKRRIDGRNKGLIAIRSRGGALKRKYRYIEHYKQKWMDKWLFVMRIEYDPNRSAHIALCSILKEGIYFYVISIAKLEVGSLIITSALKLGTLQVGNTTKIKNIPEGLLINNIELIENSGSKISRAAGTSSLIIKKYNKKYSLVKLSSKECRLISNECYATIGTVSNIERKLKQNKKASYSRKRGIRPIVRGLAMNPVDHPHGGRTKGGVHWKSFSGKLAYNVSSRKKTKMTSRYIIIGHRKQKIMDKQIKNG", "length": 266 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q24113-1", "protein_name": "Protein no-on-transient A", "gene_name": "nonA-l", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MEGAVKKNSLNSSPLPQRQQRGNSTNKNLGKPTPPKLNAASDGNPAEKKARLGGNTQNGGGVAGGGGTGGGGGGGGATGGVEFSRNRNRGGNQNENRQGFQVANNSHQKQINESPKPAAGNVPAKNNELSAGGGGQNQPNHSNKGQGNQGDQGEQGNQGPNFRGRGGGPNQPNQNANQEQSNGYPGNQGDNKGGQGQRGAGGGKHQRGNRSRRSGGSGIMNSSMGGGGQRGEDFFIAQRLLDISGPTHELPPIELPTDNKFVGRNRLYVGNLTSDTTDDDLREMFKPYGEIGDIFSNPEKNFTFLRLDYYQNAEKAKRALDGSLRKGRVLRVRFAPNAIVRVTNLNQFVSNELLHQSFEIFGPIERAVICVDDRGKHTGEGIVEFAKKSSASACLRLCNEKCFFLTASLRPCLVEPMEVNNDNDGLPDKTLNKKSLEFRHERSVGPRFACLNSFEHEYGSRWKQLHDLFKSKQDSLKRELKMEEDKLEAQMEYARYEQETELLRQELKKRELDNERMKLEWEMREKQAEEIRKREEEYMHRYQNQLLRHEEDMRARQQENDLLMQAKKLNMILDQQEGFGGSNSGFEHFDSPFEVFGNNSNNSTMAGPGGPDNSDGNQHGHIDSWGHRRF", "length": 630 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q2PRK7-1", "protein_name": "Odorant receptor 106-10", "gene_name": "or80a10", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MANETFVKNVDSFIITGFDHLQNQKLLGSLILISYMFILLGNGINLCIISTDRHLHKPMYILICNLAVVDIMYSSTCSTTMISVLLAEIKTVSYYSCISRTYFFNLGDLTECMALTLMAIDRLIAINLPLRYHSFVTNSRILWLIFLTWIFSFAVIGFLTYVADTLPYCQPIIKYVFCSYSSLVRAACVDPEPYFAISTVYSMVTLCGLFPFILCTYAVLAYSVTKLANSSRKQMINTCLSHIIVLFSFYLPKIVYILLTRIGLVLTLTERNAVLIVSCFVSLLVNPTVYCIRTKGIRKRITDIFLYTQKITK", "length": 313 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2YDJ5-1", "protein_name": "Uncharacterized protein CXorf66 homolog", "gene_name": "", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MNLFIYVLLLSIWTSSCLDRNESNGSATAVTTHAEFKQTKLQELRRRLLIIVIGTLITGYMVSCTCLLHYSCDSEEAHTAAKDKKEDITIKASRSSKISFTDSKSPTAGLGDPERQSVVSRIDKSSGPSSPRKVPSSAEKLVRPSSQKKPSKPSAPKKVLGSPPQEKLHRTRSPKKAHRQAHAHKPVSQVSPSYPEKAIKSTWPPSLQCRAKPTKTPLPYPKNQSFPEQSSVDKLTKRQRYLKLKCPASAGRAEILSRPHPVKFCRCYKEKCLVCRAVSEPFITHVSDANKKHVPVPLFSRELKHFYKSYKKKQPKYNTLYGNMSDSDITTYNSDGESDREVIIMCNIKCKEDIYKNSRNN", "length": 361 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q3L180-1", "protein_name": "Alpha-defensin 26", "gene_name": "Defa26", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKTLVLLSALFLLAFQVQADPIQNTDEETNTEVQPQEEDQAVSVSFGNPEGSDLQEESLRDLGCYCRKRGCTRRERINGTCRKGHLMYTLCCL", "length": 93 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q3TR54-1", "protein_name": "Gasdermin-C4", "gene_name": "Gsdmc4", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGYSFDRASKDVVKKLQGRDLRPVECLSDATKFRLFHILQETPRSGWETEDIPVGFTLLDLLEPNFPVPEPEVSAPKPFIHVQSTDLEANLNVADIARGGVGYVGYGGYNIEVQSTSIPNPKLEILQNRKLLDKLPTFMKFCRMERKNLYVVTEAYEVSKDTMLTGLSSVNLLVKGFFKQLFKVRGKAGRSEKYSIPIPKGSVLAYKKQQLVIENNTCVILPSATKKKMTFPDRPLKLYDLPVTLRYQEEVIETGSWIDDIDPIGTIEEPANLNFMCLQHEVSEQTQLLAELSKDVQEVVFSSFLHMLSDRDVLYDLMKMLELNQLGHMDGPGGKILDELRKDSSTPHDVLKDLNLYLLQALLVLSDTQLCLLAQSVKMGLLPHQVELVKSILQTNFKYSSNTPFTLQPQLLAPLQGEGLAITYELLEECGLKMELNNPRSTWDLEAKMPLSALYGSLSFLQQLQKANSSSKPSLSPGYI", "length": 480 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q3U0I6-1", "protein_name": "Endoregulin", "gene_name": "Erln", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGQMVPPRSIQNEDFWKNPWDVGGLTVIGLFTSTFLLFVLFAVVFGYVEKAVFEEE", "length": 56 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q3URS2-1", "protein_name": "Zinc finger and SCAN domain containing protein 4F", "gene_name": "Zscan4f", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MASQQAPAKDLQTNNLEFTPTDSSGVQWAEDISNSPSAQLNFSPSNNGCWATQELQSLWKMFNSWLQPEKQTKEQMISQLVLEQFLLTGHCKDKYALTEKWKASGSDMRRFMESLTDECLKPPVMVHVSMQGQEALFSENMPLKEVIKLLKQQQSATRPTPDNEQMPVDTTQDRLLATGQENSENECNNSCNATEANVGESCSGNEMDSLLIMQKEQHPEHEEGNVVCQFPHGARRASQGTPSHHVDFPSAPTTADVPMEEQPKDLSRENISEDKNNCYNTSRNAATQVYSGDNIPRNKSDSLFINKRIYHPEPEVGDIPYGVPQDSTRASQGTSTCLQESLGECFSEKDPREVPGLQSRQEQLISDPVLLGKNHEANLPCESHQKRFCRDAKLYKCEECSRMFKHARSLSSHQRTHLNKKSELLCVTCQKMFKRVSDRRTHEIIHMPEKPFKCSTCEKSFSHKTNLKSHEMIHTGEMPYVCSLCSRRFRQSSTYHRHLRNYHRSD", "length": 506 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q3ZCQ0-1", "protein_name": "Required for drug-induced death protein 1", "gene_name": "", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MTVGARLRSKASSLVGRGPLGRLRRAGDEETDAIVEHLEGEDEDPESQDCEREEDGRRAGTPSARRVHLAALPERYDSLEEPAPGDKPKKRYRRKLKKYGKNVGKAISKGCRYIVIGLQGFAAAYSAPFGVATSVVSFVR", "length": 140 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q4JEI3-1", "protein_name": "Defensin alpha 3", "gene_name": "Defa3", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGTLTLLTTLLLLALHTQAESPQGCTEDQKLLIMEDQDISISFTGDKGTALQDADVKSGVICNCRPRGCSFKERVYGECGYNGHILRLCCQPLNTMNKKSPSVI", "length": 104 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q4JEI6-1", "protein_name": "Defensin alpha 8", "gene_name": "Defa8", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MKTLVLLSALVLLAFQVQADHIQEAEEETKTEEQPADEDQDMSVSFEGPEASALQNLEIGWPLKQCHCRKFCRPYEKAEGSCRPGLFIKRKICCIQQWTPGRT", "length": 103 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q4KL71-1", "protein_name": "Small proline-rich protein 2A3", "gene_name": "Sprr2a3", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSYYQQQCNQPCRPPPVCPPPKCPEPCPPQVWPGPCRPVMCFEPCLPSVWPGPCRPVVCYEQCPPQPWQSTCPPVQFPPCQQK", "length": 83 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q504N7-1", "protein_name": "Pyrin and HIN domain-containing protein 1-like", "gene_name": "Ifi214", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MVNEYKRIVLLTGLMGINDHDFRMVKSLLSKELKLNKMQDEYDRVKIADLMEDKFPKDAGVVQLIKLYKQIPGLGDIANKLKNEKAKAKRKGKGKRKTAAKRQRQEEPSTSQPMSTTNEDAEPESGRSTPDTQVAQLSLPTASRRNQAIQISPTIASSSGQTSSRSSETLQSIIQSPETPTRSSSRILDPPVSLGTAYSSAQALGVLLATPAKRQRLKNVPKEPSEENGYQQGSKKVMVLKVTEPFAYDMKGEKMFHATVATETEFFRVKVFDIVLKEKFIPNKVLTISNYVGCNGFINIYSASSVSEVNDGEPMNIPLSLRKSANRTPKINYLCSKRRGIFVNGVFTVCKKEERGYYICYEIGDDTGMMEVEVYGRLTNIACNPGDKLRLML", "length": 393 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q54B59-1", "protein_name": "O-methyltransferase 12", "gene_name": "omt12", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MSDWDKTMDLLFGFVTGHIHSRMFETILKFSICDLLEDGPKHYSEISKIIGFKNESYCYRLMRYFVPYKLFNESVVQVGLFSKTPSSTQFSKNGTLKNLGRFHCQDHHYRIFESLPKTLEMGKNQGPSSIGLSSFWEHFETDESYKQLFHNAMKDYTSLIIDRLISKISLSPNFKTVVDIGGSHGFLIGKLLESNPNIHGINFDLENIINSSTSKNENFQHPRLKHVSGDFFNSVPEADCYILKYILHDWSDEKCITILNNIHKSLKPNGKLFINDLVLDPSNYTKEAVFKDILMMQYFDAKERSINEWHQLFEKCGFKIDSVDTSISPQLMIVSKINSSNINLNDCTNFNSEIVEEKLKNSLPQFVNC", "length": 369 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54B60-1", "protein_name": "Probable inactive O-methyltransferase 11", "gene_name": "omt11", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MECSESLELVDKFACGHILSRMFNVVMKHSICDLLEDGPKHYSEISKIIGFKDDSYCYRLMRYFVPRKLFKESVVQVGVFSKTPFSTEFSNNGTLKKLAKFHCNSFHYKLSQVLPETLEIGENQGPSSIGLSDYWEQIEKNEIYKNEFNDGMIGYTTHILKFLKGKIDLSKFETVVDIGGSHGYLIGSLLDRYPNVNGINFDTDMVINSSNEKYQHPRLKHVAGDFFKSVPEADCYLMKLILRCFSDEKCCELLKIISKSMKSNAKIIILDIILDSSKYLNFDTYLDILMMETLDGKQRSLSEWIKLFEMSGFKIDKYESGSPNYLIISKE", "length": 331 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54B86-1", "protein_name": "Hly-III related family protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MPRLDHKKNKEEKDNEPLMMVNNYNIGIQTDNNQEDIQNDYHHFNDLSINIKNNKNNNNNNNKCNSLHHKHYHNRFIINGGNNNNDNNNNNNGDDCCANIELFVDLMLSENEYILSGFRLHTKNSYMECTKSIFKLHNDTLNIWSHLLGALFYLVLFFTSIIKIIKLNNNDGGGGGGIGNNFILNSDEIKLLETIDLPSNFNYLFFQLSCFICFLSSTIYHTYRSHSIVVFKTTLMLDVASIALLILSSVCLIIDSELSCWPYFKRIYLFSFLILILISFLSLPKIMREKRYGLRTFLFAILALQGLVGHLFKIYLQGYFDKDPNQFYNLIGAYTLFGLALSIRRFKVPESFKPGHFDVWVNITFNIVYNII", "length": 372 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54BG8-1", "protein_name": "Reverse transcriptase domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIKIMTWNCQGCSTIKSMNQTKNTINLIKPDISILTETNLKKDQNLAQIKNHYSTGGKGKEARGKGVMAINHLEQIEIKNLEEKEGRILKFTAILNNMEINIICIYAPASYDRRKGWFSNNISLEDLEQADIVTGDFNINKYAKIKFKDGSSDKRKFTENETIEFLMMEVGLTEILPNSTTKTTFKDKLIDRTFLSTKMHQLNHSYKIIDKINKSDHNIVVMDFKIPNFTKIYKSPLWKMNSIIIKEDKTIKKIEKIIDHYQETKRKNINITEYWIKFKKKIKKQCITTEKKRILERKKTLSNLANEHTKTKNKYEKETISNEITILQEEERIDRMIKSSINYINNKEIASNLLTSILKKRDSSSQIHRIKNPSNGKIETEQKEITDCFRKYYETLFKEKECDQETHTELLSTWNPPIDKKKLTEMEDRIEEYEVKLAIEKIAEGKSPGEDGITSSFYKIHQHKLIPILTELFNFFLNNEIPTEFKNGILTSIYKGKGDVLEISNRRPITLLNVDYKIYSKIINNRILKILPNIISKYQNGFIPGRLLHNNIIALDLAMEKSDRNTIITFYDFEKAFDSISHKALIRTLNHLKFPRKITNTILSMLTNTNIRVMVNGQLSESFRAGRGTKQGDPISPTLFAIVCECLSTSIRKDNTIIGIKLNQNNSMKIGQYADDTVTLASNIDDADKMDMKVIKFCQATAAKINDNKCVCITKNPKIKTKYKTIGAKEEERYLGFFFNRKGVISKVDDTVNKLENLTKCYSSVSSTLKGRITILKSYLLSQLTFQLYINEINDIKKLENVNANMLFKGDRWAISKERSRRDYEIGGLELWNMATRSNAQKAWIYEQYLREKDDQNCPPHMEVWKSEKENSLSRIHIKCWKAWKLLHHPRERITLKLNQVKPKYENKQKLKVIYRNMMDIKYKGWNKHQPTTGQKLIQKNINHPILPFREARSITTIKGRDLAWRYLLKALPKHHGENCHSCKEEESSMHIFFECKSIKQNIDSIYQKVCKDSNNTYHGPWSEKVLGKLLTPFSSNLIGAIMESIWYRRNQIKFNDNTTIITENQIIHKIKKARDAEWDRTRKIVEKQLRQELRCTDNRESINRTASIKRRLEKFSHNWNSKLMTINIPEHFIPYCSYNTNYS", "length": 1144 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54C66-1", "protein_name": "RING-type domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MYKTKKYKNPFPTNSYKEPENDSDNEYILHNEEDNEDYGSNNNNINNDGFSYEDNIENSDTEDEREDYGYINYNTNNEEDDEPIDLSTPIKKKKANNKSFKPPYKNTTTTTTTTTTTPPTPPPSKSNNNNNNNNNNNNNNNNNKNKENINKESEYELNKFLDLYNDFKSESDNKVKPTATTTTTTTTTTSTSTSKLNKDKKGVIVIESDEEKEDNTIKINKRNGKRKEGEQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQGNEDNLKSENFNKFKKLKSFSNQPTPLPPMLSNPFLNNSGNSHNNNNNRILFNSQFTNASNLNNNINNNINNNINNNINNNINNNINNRNNNTNNYTNNNNNNNNNNNNTNNNNSNNNINNNNYNNNNNNSFSFLPIRSNTLPTIVTRRTGIQSSSSDNGNSNSNHSSSMNKRNTSKSNNKKSTTTTKTVLPPPLSSRTQEEEDYALALSISEGLNGGSGGGSGSGSGSSDNSTKTKRSKSENDLPNEETRHQVEMDRRFAEQLHREQHENINQIQQLQRRLHLNQQRTNNINRNHHGDEDEEDIEMLNLRAYQQIQQQFNQHFNQQLNQLANHPLANLFSHASRGRGRGARRIPHHPHHHHHPHQAQYLTGLSQEQLNLMTRDFSSNDYELLLQLDENINNKGATTSDIENLPVHTLNKPTATTTSTTTTTNSSTSDDNKKNEPTTDVTCCICLCEMEPGDAVRTLPCKHFFHVSCIDQWLKVNKVCPIDKKAIDEK", "length": 766 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54CY8-1", "protein_name": "Obg-like ATPase homolog", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIKGIKLFNNFTNTKQILFFRSFSTAAKGDRLKASHYVKTRGSCKSISIVGLPNIGKSTFFNALTSSNAAMAANFPFCTIDPNIGKVFVPDERLDYISDLLKTKSKIGVQLEFVDVAGLIKGAADGEGLGNKFLGNIRQTSLICHLVRCFEDKGITHVSDEIDPIRDIETIETELILADLQSLEKMLTEGKKKQSNPELQMKFDLVKRISEYLHKGLPARDVEITDMEWPVFHSLHLLTSKPTIYTCNVAEGDAATGNKYTDLVKEYSKSKGLEIEPVVISAKIESELANMEGNDETKKEFLQLYGLENNGLSKVINGAYKLLGLQSYYTASSNECHAWTFKAGWTAPKAAGVIHSDFEKGFIKCDTISYNDFIECKGDEKIAKEKGKQRSEGKAYIVNDGDILFFKFN", "length": 409 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54D44-1", "protein_name": "Probable polyketide synthase 42", "gene_name": "pks42", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIESQREFNCIGGDNQNGVAVIGVGFKIPLDLENCLSSPSELYSALFNEFDSVTKNTSSRWSDNYFKNGDIVSLSAGLLPLREIKSFDPTFFGINPSDADLIDPQQRLLLKCVWNALEDGGIDPISIRSSDTSVYIGCSTIDYFLLNRNPVDPHNHGIQTASYSIPNRISYCFDFRGESLFVDTACSSSLNAVHLGYNSIINLKSKLSIVGGSNLILDPQNSIFFSKQQVNGPSGKCNSFSEEADGFVRSETVGVVVLKNLKDAIKDGDRIYCVIQGSNSNVDGNYEKLNYISPSKLSQAENITKALKSTNGAVNASDIDYFECHGTGTPTGDPIELEGISIALNRTQQSTTLSNPLLIGSIKSNIGHGEASSGIASLIKCCVMFKYRQFLPNINFKTPNPLIKFKEWNLKVVTEPVPFNNNKQTIMAINNFGVSGSNCCIILSEYKSNNNNNNDFKATTHLKSKKFIIPFSSNSSTSLDNYKSLLSNETNNFQDFVIKQINNKSTSLIQRSVIIASNWSEFNESSNEIQSNIKKSIISNITIKKKNAVTVFVFCGQGSQYNKMALSLYENEHIFKSTMDKLDKELSKHYGYSILEKLRSITDEDLVTIHQPILAIPVNVMVQVSLYELYKHWGIKSDIMVGHSFGEIACSYCSGMVDFKTLCYLTYHRSVAQNKTIGSGKMLSINIGAKEYLDSYSTKYPSVEIACYNSETSIVIAGNEELLNEISKDLKSKDIFTAMLPSLSAFHTTHQSVIKDDICSLNFKSTLSKITVFSTVTSNQFGINNNNNNNNNQLNSNYLFQNVIQPVKFSETISNIYKYIESNDMGNEITFIEIAPHPTLQYYLNQMKSQQSEYFNNGEKISIYSACNKKKNDYNEFLKTISTLFVNGYNNINFKSQIINNNNNDNNNNFNLPLYQWDDNEYYKIHPTWKKANKNGPSINHLGNLNDSSIKSFKTYINTRKPQFQWLKGHSLKGKVVFPGMGYISNLLSVYNMNQDITINEIQFKSAFILVDGVNNCLETSIVPLTKNEFNIKFHFKDLKTNKWVLCANANYSLFKHNDNNDKLDIEKLKSNCNYTIISKDELYNNIRAKSGLIYKGLFQGVKEAFIGNRCSLTVLSLNEIENQQEFKHLLENRNFNSLFNTAILDSCLHGSLHSKEQSQIYFDKCEGFKYYSNNINLATSKRNEYKEINVYIETNPVINSTVIVSLKIMLPDGTLLIEIQKVVCKSSIPIIDSTSVIQPSPKDLHTPYYQPKNSLIKPPQSFKHLHCMKEFASIESDNREMVYMSIYHLIFKAINARSPTKINLESLENLTLDQFKELIKDSAANIQRSNQFIYECLKLYHTNHSNYKKNQIKDFIKECEDFNGYNQIIFKTIKIYAKSLFPLPDDDPFTDTIQSLFEDDQLENVYIHLKHLYPVNNLLSEIVFQSIKPIINQTSTFRILEIGAGYGTISQLIFDKLEQLLADNFTSSRIDIEYTFTDISNTFLPRAKERYSKYKRFNIIYKLLDLELPLTEGIQDFRPLYYDIVVMSNVLHVVKDINFSTNEIYKVLKQNGQLIFVEPTYKNLYLDTIFGIFPQWWSFNDDIRTDRCCLEPSKWFEFLETINFKDTIILGQDNKEILKNVENSIILVQTRKPSQLELSINNSPSTNQFKSFENIILYTDDNQQPNDCSEIIDLLKSLELPIKIINNIDQFNQIIKTQYNNNNNNNNNNNNNNNNNNNNTNNNLIIFLKSVNQLNTNNYKDITFEYVQINQILVKLELEENYKLLLITNNSQSSNYLSNSLIGTSRYLFADIVSSKLDIITIDFDTVSIKNHQNVISVINHLLDSKDNSEREYYIINNEINIERYKNESNIKHQLKSKTFQENKDELMVQLDSNLEYRLKSKSKQELKSTHVEIQVKAIGINYKDYATYSGLIDSIIEIDKDKEKDENYDQNYPSIGNDFSGVITRIGSDVRKFKVGDEVCGLAPKTSASHIITEEGYLCKKPSNISHSEAASSVTVYTTSFQSIYSIGDLKKNETILIHSGSGGIGLSALEILKWKNHQGYIFATVGSEDKVKYLTDTYGSFITGIYSSRDKDYQDQIKEKLKSLGCDIDHQGVDLILNTLSVEYMDSNFKCLNQKGRCIDLSITHLTPFDYMDYNKFKFNVSYGNIELVVLPSKIIKDHLKKMLKAFSLGSLRFIPIVEFSNLNIRNAVEYINQRKHIGKIVVKNDVDFINKLFIEQQQQQNSVENNEILMKDKYDISNLELGKNILLTGQTGIILTILKWLYKHSNNSIENIIIISKSKLKWELELFINESTNNRIKIHYKQADVGNNNELNQCFEELRLRHSIEDINSIFHFAFINDIGQFEDVNMNRMDIAHHAKAIGSLNLHNQSIERKWNIKQFVLASSALSVFGGDNQCCYISACSVLDSLSKYRKSIGLPSLSINFGGVTSTGFVSRSGAVEANLESSIINLITPQSLISSLDLFIQNSQTFSNYTHFNFIYDNIESYSLNRMLFKFDYLINQHSSLVSNKRLGGINENNNIGDLLVSKIGELLSIEPSKLNLDFRLVDYGLDSLVIVQLKNFIDKQFQPHLISILQLQNNKISTTIEIIIKGYNNNQNKKIKNEQSNDIPSVVQKETIKDNNENKDDIKIDMDDKKENLKGKKENIDDKKENNN", "length": 2655 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54E06-1", "protein_name": "Transmembrane protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MTIINNDNISLATSAKLSQFIVSGDYKGPFTIIGLKTKILSFSLVIEFILLKIELIKERKDGLKINFDDSISGSCNYELNYTKQDTLFQRFQSKFKIEHTINPENGETINTGITLKKLFIISIPMSILFVALNWIWMLAISMTEVSISTALYLKILKTISVIIFMGGIVGIAITTVGTSKGEYPHAIKGEILMIISAAMWGLYEVLTSKFIGDANRTIVHTYMGLIAFVNLILGIPVIVILNVTNFEPFSVPSISVFGMLLLNAFVGFSVNYLINWGLSVTSPLFVRSGELMVIVATLLFDIIIKHMKLPLLALPGYSLIVIGFILSVYIESRDIKQQQEKEKEKQKNNNGETESLLNY", "length": 359 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54EC9-1", "protein_name": "DUF781 family protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MLNKIILIFFLINNIFSIVVSSTKLNPWVFEERIKLYDILINSTKVEIFGDDNLNNCFQGFKIQLEWQKTTGRSMIIDNSNISVNSWWGSMNYYESIIPFISAMNLGIIQPPIELVNIGDDRFCTDYSECDKELMEPWDLYFQFLIKIKDEKYSYSIQQQILKYNWDGHMKSLSIGLKLFNDKLNYLSKNEIKFSTGFVHFVDIISLINFNTNYSQILPIFDSLPPRMLTNSDHPPFFKGFTRTQNFYTVSVLSINELHENQILWNYFLNLLKTKTENEKCRDFINQEIINFTKYPESTLVKLLLKLLLNNC", "length": 312 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54ED6-1", "protein_name": "Probable polyketide synthase 41", "gene_name": "pks41", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MDSKNLVDENCNKVAIIGIGFRFPNLKGDITPNELWSKLLNRYDGIVKNDRWNESFFKSGDISTNYAGFIPFEELKSFDPLFFGINPSEGIHMCPQQRLLLKCTWEALEDSGIDPIEIRGSNTSVFIGCSGADYQNLNKNDNKVQQEIFSSSTHSISNRVSYCFDLHGESMTIDTACSSSSNAIRRGYKSIIDGSSNISVVGGINILLDPNISKSYSRLNILSKDGKCKSFDAGADGYVRSDAAGIAILKNLNDAIKDDNNIYCVIDGSASNVDGNGFSDKSNFYSPSKSSQVECIRLALESTNGQVNENDIVYFEAHGTGTPTGDPIELESVSIALKTSENRSSDNPLLIGSFKPNIGHTESASGISSLIKCCLILKNQCFVPNLNFNKPNPLIKFDQWNLKVVTDPIDFSTLNYINKRVSIAINNFGVTGSNCCLIVSSFKGNQIRNNINNKSKSPKQYLIPFSTNSIKSLDLYKSRIDNNVEFKEFAENQIKSKSKKLIQRSVVIASNWDEFNLKSNTINTSNDKLTSNMLVSSNKKNVTMVFVFCGQGAQYSTMAKNLYDNEPIFKKSMDKIDSKLNEYYGFSILEKLRSFNENDLKGIQYSIIAQPSTCMVQISLFELYCHWGIKPSIIVGHSLGEISSSYCSGMIDLDTFCYLIYHRSMVQSKTNGLGRMLSISIGENEYNSKYSSRYPELEIACYNSPSSIVIAGKELILNEIIKELKKDGVFCAILGSPTSFHTSSQLSVKDEILKISFKSKQPTIPIFSTVTTNLYDEMNPFDTKYVYDNIINPVRFTNTISNIYKHIELNYSVNNNSNEVIFIEIAPHPTLSFYLKQMVPEDKKQSVSIFSPLSKKKSNDLFEIQKLISELYCLGYNGIGFNIQLSDHNNTNNQTRVNLPLYQWEDQEYWKLDNLHQYHLSNGPSINHLGISNSNHTPIKSYQTHINIQKKPFQWLKGHQIKGKYYFPGCGYIDNILKIFGESKTDTNPNKELPDILISFIEFKTPLIFMDGISQCLQTNIHSTGKKEYKALFHFKDEKSSSDWVQTSTANFQLFSRGPNLNEDDEQSLFMYNINDLISNQCNLTKLSKQELYSHIKTKCGLNYSGDFQRVDKCYLGYNCSLSEISIIQGVNENRSTFFDSSIIDCCLHGSIGLIDENCQLVFEKLEELTYYSSKVPKTTSQHSKIYVYSKLKPRIGDSYSASIIVMLENGTVLFEMENASFKSTTKIKDPLAMEYPTNEIYSCNLQSKDSLIPSLSSFDHIFKRKIPNEYVDQINIYESFIPKLLFSNINKRCPEITIDEIQSSEIEQLLLKYYKIKEDNDNKWLSRLFTFAFESIKQWYHNEDYDFENVLSPHNFKIFSKSTKIISKLLFPLENDNDEDSPQSLFEGGLLDKFYSSGFSAQNELVGEIIQESIKPILNEKLVFRILEFGGGVGSLSLLVLEKINSLLIQYPNYQIDIEYTWSDISPSFITEAKAKFEKFNDRFNIIYKALNLEQPLIGEKQGLKPQYFDYIIMFNVLHVIKDVKYGVEQIYQLLVPNGHLLFIEPIYKSIIGDGIFGVFDQWWSFQDTEIRKDRCCMKQKTWYKLLKSVNFNDDIRMTPELTCFVIQAQKPSISNLSFSKSETTNYDSIIVFGNKYASNLSNHFIKSIDNGNLQFISTIEELNKIGKYISNESIIYFIKSIDELSVDNFVNITHEYTQINQKLMELNCKCKHVLITNDSTTTNYLSSSLIGAARYYHECPLELFILNFDTPSIIENQNLFKTIEPLINSSINIQREFIINNHKVYYERIKNETKLKSIFKNSSSFESLEQVDNFMISLTPNLEYKVKVKPTSILKENEVEIKVMSTGLNYKDYLIYAGLVESVEPIFGIEFSGIITRISTGSKEFKVGDHVYGIGKSTTSSHIITDIDVISHKPSNISHSEASSIPVVYLTSYHSLYNIGALKNNETILIHSATGGVGLSTLEILKWKGHSGLIFVTVGSNEKEEYLRENYGDMISGIYSTRNKNFVKQIKSKISKLNPFGKSGVDFILNTLSSSDYMDSNFKCLNMSGRIVDLSITHLNSNEFTDNKKFKYNYGYHNIELQYVDKKIIKSTLSIISNAVSSNDLQLIPITHYSIEKVKESIEFINERVHMGKIIINHENQDSIINELIEKQKSINKFDQSIFKQNYKLEPSLLGRNILLTGQSGIVLEILKWILRNSENNSIGNIIILSKSSIKWEMEYLINKVKLINKLGNFFNNIKFHFKSVDISDSGLIDESINKLLIENPDINNIDSIFHFAYTQATCNSDEVDLHHLTQSHSAKSMGAINLHNQSIKRNWKLKNFIMSSSVSSKTSTANQCGYISSNNVLDALSKYRISIGLPTICTNYGLIESTGFVSRNESVAALLSGEGFIPISANLILGTLDLQLQNQAQSSNLILSNFNFTSLNGLPQKSLISKFDYQININEENEKSKSLLKDDNVELTVDQLITFKISEILSTDILKLNKDIILVDYGIDSLVIIQLKNWVDKEFSIPNELTIQKIQNSTINSFIQLVKNSMDKNKK", "length": 2542 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54ED7-1", "protein_name": "Probable polyketide synthase 40", "gene_name": "pks40", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MDYKNKYQSNENCNKVAIIGIGFRFPNLKGDLTPNGLWSQLLNKYDGIVKNDRWNESFYKTGDIPTKYAGLIPFEELKSFDPLFFGINPSEVIHMCPQQRILLKCTWEALEDSGIDPIEIRDSNTSVFLGCSNFDYQNLNKNNNKIQQNIFASSSHSVSNRISYCFDLHGESMTIDTACSSSSNAIRRGYKSIIDGSSNISVVGGINILLDPNTSKSYSQLNMLGKDGKCKTFDADADGYVRSESAGIAILKNLNDAIKDGNNIYCVIDGSASNVDGNGFSDKSNFYSPSKSSQVECIRLALESTNGGVNENDIVYFEAHGTGTPTGDPIELESVSIALKTSENRSSNNPLLIGSFKPNIGHSECASGISSLIKCCLILKNQCFVPNINYNKPNPNIKFNQWNLKVVTDPIDFSTLKLSNKPISIAINNFGVTGSNCCLIVSSFKGNQTNNNNNKSKSPKQYLIPFSTNSIKSLDLYKSRIDNNVEFKEFAENQIKSKSKKLIQRSVAIASNWDEFNLKSNTINTSNDKLTSNMLVSSNKKNATMVFVFCGQGAQYSTMAKNLYDNEPIFKKSMDKIDSKLSEYYGFSILEKLRSFNENDLKGIQYSIIAQPSTCMVQISLFELYCHWGIKPSIIVGHSLGEISSSYCSGMIDLDTFCYLIYHRSMVQSKTNGLGRMLSISIGENEYNSKYSSRYPELEIACYNSPSSIVIAGKELILNEIIKELKQDGVFCTILGSPTSFHTSSQIPVKDEILKISFKSKQSTYPIFSTVTTNLYDEMNPFDTKYVYDNIINPVRFTNTISNIYKHIELNYSVNNNSNEIIFIEIAPHPTLSFYLKQMVPEDKKQSVSIFSPLSKKKSNDLFEIQKLISELYCLGYNGIGFNIQLSNLNENDNIQTSLSLPLYQWEEQEYWKLDSLYQHHLSNGPSINHLGISNSNHTPYIKSYQTHIDIQKKPFQWLKGHQIKGKYYFPGCGYIDNILKIFGDNSESTTNPNKELPDILISFIEFKTPLIFMDGVNQCLQTNIHSTGKKEYKALFHFKDEKSSSDWVQTSTANFQLFSRGQGLNEDDEESLFKYNINDLISNQCNLTKLSKQELYSHIKTKCGLNYSGDFQRVEKCYFGNNCSLSELSLSQGVNENRSTFFDSSIIDCCLHGSIGLIDENCQLVFEKLEGLTYYSSKVPTTTSQHSKIYVYSKLKPRIGDSYSASIIVMLENGTVLFEMENASFKSTTKIKDSLAMEYPTNEIYSCYLQSKDSLIPSLSSFDHIFKRKITDEYVDQIKIYESFIPKLLFSNINKRCPEITIAEIQSSEIEQLLLKYYKIKEDNDNKWLSRLFTFAFESIKQWYHNEDYDFENVLSPHNFKIFSKSTKIISKLLFPLENDNDEDSPQSLFEGGLLDKFYSSGFSAQNELVGEIIQESIKPILNEKLVFRILEFGGGVGSLSLLVLEKINSLLIQYPNYQIDIEYTWSDISPSFITEAKAKFEKFNDRVNIIYKALNLEQPLIGEKQGLKPQYFDYIIMFNVLHVIKDVKYGVEQIYQLLVPNGHLLFIEPIYKSIVGDGIFGVFDQWWSFQDTEIRKDRCCMNQQTWYKLLKSVNFNDDIKMTPELTCFVIQAQKPSISNLSFSKSETTNYNNIIVFGNKDDSNLSNNFIKSIDNGNLQFISTIEEFNKMTKYISNESIIYFIKSIDELSVDNFVNITHEYTQINQKLMELNSKCKHVLITNDSTTTNYLSSSLIGAARYYHECPLELFILNFDTPSIIENQNLFKTIEPLINSSINIQREFIINNHKVYYERIKNETKLKSIFKNSSSFESLEQVDNFMISLTPNLEYKVKVKPTSILKENEVEIKVMSTGLNYKDYLIYAGLVESVEPIFGIEFSGIITNIGSGNKEFKVGDSVYGTGKSTTSSHIITDIDVISHKPSNISHSEASSIPVVYLTSYHSLYNIGALKNNETILIHSATGGVGLSTLEILKWKGHSGLIFVTVGSNEKEEYLRENYGDMISGIYSTRNKNFVKQIKSKISKLNPFGKSGVDFILNTLSSSDYMDSNFKCLNMSGRIVDLSITHLNSNEFTDNKKFKYNYGYHNIELQYVDKKIIKSTLSIISNAVSSNDLQLIPITEYSIENVKDSIEFINERVHMGKIVVDHENQDSIINELIEKQKSIDKFDQSIFKQNYKLEPSLLGKNILITGQSGIVLEILKWILRNSENNSIDNIIILSKSSIKWEMELLINKTKLLNSNSINSMGNYLNKIKFHFKSVDISDSGLTDKGIHELLIENPDINNIDSIFHFAYTQATCNSDEVDLHHLTQSHSAKSMGAINLHNQSIKRNWKIINFIMSSSITSKTSSANQCGYISSNNVLDALSKYRISIGLPTICTNYGLIQSTGFVSRNESVAALLSGEGLLPISTNLILGTLDLQLQNQAQSSNLILSNFNFTSLNGLPQKSLISKFDYQININEENEKSKSLLKDDNVELTVDQLITFKISELLSTDILKLNKDIILVDYGVDSLVIIQLKNWVDKEFSIPNALTIQQVQNSTINSFIQLVKNSIDKKNKK", "length": 2552 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54EN3-1", "protein_name": "Alkyl transferase", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MSNCSNNSENCNINDNKKKEENVKNQNSNKNSNNNNNKSNIESIILNKKSKFSSEKELDEKENKDLKDLSNNKPINIDEYEGLPRFENEQNARSKSSLWSKLCDWMYDQNFKIASSTLKNGPIPKHIGVIMDGNRRFAERNHLETKEGHKKGFNTMLDLCQWGLTLGVKIISVYAFSIENFKRSKSEVQDLMELANNKFTEMISKSHKLQQLGVRIRVVGDHSHIPEKTKSILAKAVKSTENNTKALLNICLSYTSHEEILHSMKILSKGVNQEKKIEIEDIDQDLFENCLYIKEDLDILIRTSGEYRLSDFMLWQSCFTNLALVNTLWPDFSFFHFIYIIFLYQFNSKTLKNEIQNQYKFNNNNNNNTDNNNNLKENIKNLKSDQRVKEFINHLKISEEKLFDEFISKYNEEEEEEEEI", "length": 420 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54F52-1", "protein_name": "Saposin B domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKLIFIVCLLLIFNYFIGISFGNKQINSNQQQQIINTDKNYNHNKNNKIIVSHNKNNNNNNNYNEIETENLGCTFCKYLTEKVEEYLQANSTEKEIISYLDEECELLNSPNLVLTCQNLVQQYTPIVIELIDNNESPSVICENVNICPTSSSSSSSSSIEEEIIKKLNIDDNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNEEEEVNTCEICNLVSNLIEKYIKINNEVDEIRELIENECELLSNSKVSSCYSLVDQYFEHFYVTIENNYSANEICQLFQFCPIESSSSSSSSDIINNIPLQDSGCTVCTVLANYAYKVQANESIPEIIGSMDEICNKIGAWRDICNSIMRSGGQQLVEDIVNKGEGVYTACSNIGYCQSSSSATGTSGFSSGGSGTSTGGGYSTGDFYYKPLK", "length": 416 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54GT5-1", "protein_name": "Endoplasmic reticulum junction formation protein lunapark", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MGNLFSKKNGFEKQLLDMETKILNLEDKLSNSRIFHQKVLHKIVLYSFAIEFFIILFTYVKSRSLESIPEKLFCCIYLVLFPIFILILTKVYGFVYKYLIKKNEVRLDSLKTGLQKKLDERKRETDYENTQKLLDRYEKNPPSPTNKPLGPPNLNNNNNNNNNNNNNNNNNNNNNNNNTLGNSMRNRNQPFNISSQQNQQQQRMIQPQQLSPQQLQLLQQQQRLSQQIVPSQQQQSQSQPQQQQPILNQPYNINNNNNNNKPPPPIQLPPQQSSQYIGNQQRLPPQQYQNEQKSKWWLDKLVDYLISDGPTHGSPLICSNCHSHNGYVPVEELSNIQFRCRVCKTFNQRDSVNNSTTNDDRNNSQNTGSNQQQSQSLQDQQPSIEEIDKNFSVTEQKNETNNENYSDSEKQLEENNNNNNIDNDSGSSSSQNTPNKKKGKGKGKGTPTKKTN", "length": 452 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54H60-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MLDFFHLKDVDEFFRLLEKKNLQNLDNQIDGPGNLNWRTTYTEKDFSKVPKFRGIIHIVQIRDLGTKIHRDLLYEIMFEKLLDIARLNNESKLLKNEIQDLKTKLDEYHNNNSTTNTDLIINSFINVIDTTTTTTTTKTTMGATSIDKKQSEGDSIDKSIELDFFKIKSDQSQQSSPSHKLEEKQNQVNNITNEIPQESIKTVKQQTQTETNQQTFSSTSPSHQNEEKQDKQEEVKQEEVKQKEGIQKEDKKEEDKKEEGKQKYGEIFIIEIPQEEEKQKEEGKQQDGENFIIEIPQEEDKQKEDKKEEDKKEDKQEEDKQKEEKLEDKQKNGEEFIIEIPQNETLEIKVDTHPRSSNDDVSTAEMEVEALKTPLFAETTFVTKQQVITNKKLLVYKQSDFFPNMTTLLQSRLKDVTVQEVKDLTKIGLNDNSYSVGDFENVFVLYAVSCMGARTDSERDAFKIKSIRSIIGDKVPIIYGVFMIGKNGPTRIKVEHTQTSISITHSMSDIGRNLQNNENLKQLQSFLQQ", "length": 529 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54H72-1", "protein_name": "Tudor domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MSNIDFEDYEFYDDSDFEINTVDESVMTYSSVFDFLRFGKIPKFDTQTKMKHFKDNISKYRIESKDILHTNVDSKILRRLSEIPRVEKIFPDPNTLQLEVFKPNHELRNSNGELLSKHRPLQETLKLIEKQYYWECKFIHTSMEVDITKLYSFCDLCSQSSVSRDMDIDSNDEDKILEQMDIVEKSFSNDRNNNNNNDDNNKSIDEKDKMNICGIGIDLEAIKEGKLFEDELAEALGFPEYNSSVDNSFNSSVNNSNLNNSSLNNSLNNSKNNNNNDDDNNNNNNNNNDDNNNNNNNNNNNNNIISNIDNNNNNNNNNNNISNIDNSNNNNNNNNNNNNPVNDDFSFIIPKDYQSKNHLNDNENKDDEKDDDKDDDKDDDKDDKDDDKDDDKDDDKDDSKDNGYIKTNVSLSSSSSSDNERDDGDSHSDKSVDNDENNNNNINNIISDCNNNNNNNNNNNKINGRTFTSRRTRSDSNTSNSSVGSYISNSSKSSANSYDFSSSDQDYKSPNSPTVKKTRGASLVNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNINNSILKPKLKSKRASASTAINSFISQFITPKHPPKSSSRLKRANRSNDSSDSGDSSSNNSSRSSSDSSDNENNNSYYLPIQSRRSTSKQILKDHLKSPTKKPRRIIEEDFYHVEEKKSPTSKISTPISRSASYNFGRSSPGSSPGSSPSLSPYSSPPQSPPHVYNHNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNYNNNNNNNNNIRSILKSPQSPSISPIKTPRRSPQQQQQLQLQLQNYIPMPTKTKTPTKAPYVPNYALAPIEPKPTQKTPVHVFGGNQLSVKKRQTIEDMITEVLKMNVDTAALKLPLPKVGQHVEGKSNMEDYKDAWFKGVVKEVLPNDFFLISYIDGGEEELSYTRLKPNLTSELEPLKLEEIVVGGEYLGSYRNFYYNVYVLEILRHSIRVYFADLEMAKTIKYSQLYLLSSFVKR", "length": 998 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54HE0-1", "protein_name": "Conserved oligomeric Golgi complex subunit 5", "gene_name": "cog5", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MNNNNNNNEGVSSSSSSSSSPLPNISSPNLISNSNIENDIEIKKKSNNNNNNIFEGDNSHIYNQFLGEDFNVVHYTSNALKVSSISLSLNTLTSCTRELGQELTENITTNYDDLFKLANNIKELDQLTDTLKLGVSNLEESIQRMKNDISEPYNKVKSHIGQLKRVQDSCELLRKLIRYIQLVKKLKNHLQAGSRDLSKSAQCINEINLLKKDSDLTGINIIDSQVVWIKTCSDQIITISSTLLYQGMENQNQTDVANSLQVFHNMTILNEKVYSIVNLTTEKVIKNIKALLNVNKLIADLPKTTITNNINNNNSNNNITTNNNNNNYNNNNNNNNNNNIISTSTDKSIWLKFESLIDTLYSSLIQILHLQRVLLKIKDPLTHKSLMEVLLIKQHQLQQQQQQQQQQQQQQQQQQQQQQQQQQQVGTTSNNTQPILIEMISTLFWKSILKVLENNLLVAAKSSNIIENTFIREYPKVSKFFLDFIKKLQNYIDIHQMDIQQQFMIVLSNINQIIGNNNSNNSNSNSNNSIESSLSTSSSSSSSSSSSSSTTTTATTSLILLSADDYKLSLFKSIGLFEKAYLEYSQSKMSTIVNGLFPQSTWSSRSTLPVIPNGKQLVDLSKTIWSEIEWLVGNNDRQLLGKLMLVVSKVIDLFSSKIESMVQPPGLIVLNSNIGSSSSTGGVNNNSNSNNNNEIITINENSKPTPSQTVNTLLFNVSIQLNSSIQSLLTSQPLERESIIVIEKSLNSLITICTNIITPLMNSFFTHIEQIFSTIHNEDWYNEKTTKMLINKSNQTCSSYMESFKTLVNYFQNQYLMRFTPCQLLNNQIKSMISKIFIVYLKYCSLLKQPFSENGKLKMVNDLTHLEFAVTPLLVSGGIKEIGESYNLIRNYKQSIFN", "length": 898 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54IX3-1", "protein_name": "Probable polyketide synthase 26", "gene_name": "pks26", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "METNNNKNIQEDIAIIGFRIPGCQDNTPSELWNNLMNKFSGVGKTTERWSDNYHLSGDINNGNSGLLPLKEWKKFDPAFFGINPTMVSTIDPQQRILLKCTWEALEDAGIDPIKLRGSNTSIFIGCSTGDYLDMVKSNNEIQTNLFGSVNHSLSNRISYCFDFHGASMTIDSACSSSLNTVLLGCQSINQGKSNLCIAGGVNFILDTTIPTAFSFLNILSKNGKCMTYDEGADGFVRGEGAGLVVLKSLKDAIKDGNNIYCIIKGGNTNVDGNGNADKANFFQPSKQSQSDNIKLALESIKKKSMLDIDIDYVETHGTGTPTGDPIEVEGISKVFKENHSPENPLLIGSLKSNIGHMEAASGVTSLIKCCLMFKNKSFAPNVNFQKINPKIKLDEWNIKVVTEAIPFKKNKITSMVVNSFGVTGSNCCLVLTESINNNNNSNVDKITKNEKEYLIPFSANSNQSLKNYIEEVSKIDESLQFEDFVYKQLSNKSTSLFQRFVVTSKDWKELKYKLSQPLPLKEISSSISVKKPNPITVFVFCGQGSQFNKMGLELYNNDKNFRNYIDRFDKKLLEYYGYSVISKLRSIDDNDLITIHDPIIAQPATAILQISLFELYKHWGINPSFIVGHSLGELPMAFCSGMIDFDTVCYLLYHRSLAQSKTNGCGKMLSCNISSEEFVKNYSPRYPFLEIACYNSPNSIVVAGKESILLELSKEFKNSGIFCAMLGSLSSFHTSSQLEVKDHIYSLKFESKEPVIPTFSTVTTHLFNSNKLYDNDYIFQNIMKPVLFNETISNLYKHVENNQLGSEMIFIELAPHQTLSFYLKQLIPKDSNYFSNSNSITILSPLHKKKNDYLEIQQTISTCYCKGYDVNFKSQILIESKTNISNKSLPLYQWDDKEFWKDLEKQKRILQGPPMDTLGFSNEKSPILKSFETKIDIKKKPFQYLKGHIVKGKIYFPGVGYIENLLKMYPSQDIDIDSMEFEAPLILIEGIVTCLQSNVYKIGKNEFKVQFHFQDQKTKQWIQSSFANYHLSHRDDFDPTTNKLNIQNLISNNCNLTKLSKNQFYNFIKAKAGLSYNGEFQGVEKCYLGDNCSLVEIPFDTSNQDVETNINMIPILDSCLHGVHILYVEQCQMVLEKIEGLKYYSSTLILSKQKEQQKLYVFTRIENKDLINNSISASIIVMISDGTVFFEIESVSLKSLIPLKDPISIENPTDELFSSYLQSIDSLISEPSSYKSIYKRNEFISSGMSDLSRSDYQQFISTLLYTNLIKRNQSIESDLRNQIEFEEIKAKYCKNSKFERLFTFVIETIKQYDGINGNLNSWNEGNIDIYKILIKSTRIISKLLFPLQGEDTTIDTPQSLFENNLLDDFYNINGNTVIQNQLVGEIITQSIKPLINEKMVFRILEFGGGVGSLSIVTLNKINQLLEQHPNFQIDIEYTWTDISPSFIPDAKKLLSNIKGVTIIYRSLDLEESLIEKQLLKPSYYDFVIMSNVLHVIKEIKFGIDEIYKVLSPNGQLLFIETPYRMLICDSIFGVFDQWWGFTDTGIRVDRCCMKQKTWFKLLSESNYQDIIMSDDIKDCCFVIQAKKPSISSLEYKLKIDSQENDKIIVFGENDTFMKYLENKSTKQIIKIKTCQQFSDLITSNSKEINNQSIIYFIKTLNQLLIENFKEITLEYIQINQLLLSSGLSCKHILLLNQSTSENYLGSSISGAARYFDEFPPLKLYSFDFDKYSLNNESINIIDDIIEPIIKSMNNSNIRKELLVRNNKIFFERYKQEKRIKENYKSTSFENDKSLFVHLNANLEYELKSKQVKLKQNEIEVNVKATGINYKDYLVYTAMTPSELINHKGESNPEFGHDFSGIITRIGDDDGDNDNEFKVGDQVYGIWFNTTASHIIVDKEFLCHKPSKLSHTIASSIPVVYITSLYSLYNIGNIQNDESILIHSASGGIGLSALNILKWKNHKSHIFVTVGSKEKEKYIHDTYGDFITGIYSSRNKDYLKLIKRKLTELGSNKKGVDIILNTLSSSEHMVSNFKCLNHRGRIIDLSITHLNHNEYTCNNNFKYNYGYHNVEVLFVKGDIISKLLKNITSAIENGSLSTGIPIIEFNDSDCFNAIEFINKRQHIGKIVVNHNKENLIQELIKKTNLPIIKSNYQINSDHLGKNILVTGQSGIILEILKWIVKYSTNVENIIILSRSSLKWELELLVNKNKNKLNFIYKSVDVGNSLEIEKVIDEILMENPQINNVDSIFHYAFTQISCKEHEIDQVHLNVSHQAKTMGAINLHNQSIKRNWKLINFIMASSAAGLIGSTDQCSYVCSSNVLDTFSKYRKHVLGLPSICINYGLIESTGFVSRNQSVAVMLDGQGIRPMQTNQILGSLDLFIQNPSKSTNIILTSFNFNEFATGNLQQSNVHKFDFQFNCCLSQKSKLMANNQASENPVKDLLINNICELLSIDESKLNIDIRLIDYGSDSLTIVQIKNLIDKNLLIPNLISIQMLQNNSISDNIKILTDSYNKKKQNEQNELKNIKVGSFTKK", "length": 2531 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54K45-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MTKILYLIIYLTLTIVKGAPLYNCKKLNCSSMNTNCKVFGCSPMFGCFETSKCPQSNVDICHTNHCDENTGSCYQIADTCNDGNNNTIDSCGPYGCVNTPVNPPEPTQSCEQKCNDNNPCTVDFCDFRGDCYHYETRCSDYDACTLDTCGEKGCEYRPMNCDDNNPCTADFCSMLYGCYHEPIECSVKVPCRTDSQCNRNNFCETYSCDLSSNICDYYTRDCGGNPCINNECRTGTITN", "length": 239 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54K50-1", "protein_name": "Phospholipase D Y", "gene_name": "pldY", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIINRLFIIIVLFFVNVNSKIISESTLNSCQGGTIQIAESIPLGLDISTNLSTHDAWMDLITNAQESIDLGFFYFTLLGGSDLDPVYGGQLGIDIFNAIVEAHSRGINVRIVQNEPSESFPDTETQTLAKLGIQVRSIDWVSLVGSGVLHTKLIIIDESSAYVGSANADWSSLAQVKELGIVLKNCPTMVADTEIAFQQYWNAADFTSLPINDWGSNYQALFNNTNMASLSLNNNNNNNNKNKNNDNDGSGTNQMYEMFLAVSPPQFQSTYRTGDIDALMDAINNADQSICITVMDYTPTTLYNDPNTYWPLIDNALRAAAFNRNVQVRMLISHWNYTSPIIPQWLHSLNQVDNIQVRWFVVPDFSTNPQIPYTRVNHAKFMVTEKQSYVGTSNWSQDYFTVTGGLSYNVFNNDFTNQLQSIFNRDWNSPYTQPIQNF", "length": 438 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54K65-1", "protein_name": "Band 7 domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MNSIKKLSTTAIKFTKQTQRFNKRGFFKILNQYERGVVFNFGKFHTVKEAGFHIVIPFIQKCDIVDIRTFTYTLDKQKIISKDNINLTVDALVVFRIHDPKLAVTKANDCILLVNEMAQIKVCEILSHNTLDQVLHNRDKISNQIHDELKEALNKYGVTIEYLKLKDIHFDETIAKAIAKKVEAANLRDIKN", "length": 192 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54KF5-1", "protein_name": "Protein LEG1 homolog", "gene_name": "leg1", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKSNKTIFLILLFLINFNSIYSFNFKKEIKISNDKINLPTYNPWIFQDRFNLYSILINSTNIPVFGEDNSNNCLHGLQLQFEWQNRSGRLEINQGHVNTKSWWGDMNYYLSIIPYLSAMKMGLVPVVEIVSINDQRFCSTYEDCDQEVLNNWDNFFQQIINIRNNGSEGDDQQLLKFMWTAHIGSIDKATKLFTDSLLLLPKNELRFGNGWAHFVDVIATVNFNTNYSTVYHLGQQLPPIMLNSNDTHPSSIESFTKEQRNVVLTMYEINDLSSNNLVWNSFMYLLKKMTKNEICRNLINNEINIFLNSPVPTIIEILFDILTNNC", "length": 326 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54KK9-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MTEVPNQKHNDGGVGVTVGNFVKDNETNVNNNNNINGKGENDNNNNNNNNTIIDEPKLLNNNNNNILVIPLTTNIIDNELNQQKQHTLPLPLPPPPLPTQPQQITPPLPTQTQLPNNMLPSPRPIQQPKIRQQTQQQQAQMQQLQLQIQQEIQLQLQQQQQQQLQLQQKQNESEINGLFSPNFSSSSSSSLSTTPNMHSPLFNNNNNNNTTTTTTTTTTTTNSSTNNTNSSTQTKNASTNKISQDVIGVFDDTDTESEGEEYHSGRSIDFWNKDYKDIAWRCNWIDLQIRDLQYQSMVCDQLYHKVRRSKQKIIPDNKSLSSSIDNNNNNNLKSIPIETIDHSNNAITSSNIPYSNNEEEQQEQQQHPSQSIRTTSVVKLRKPRKLIRRPTVKLSAKQMTTDLEAHPLFTFHKGYFKFENAIKTNIINEMEIKYQEKEKPPKLLTLSEERLKQYINSNEDVDVVNLFATNESKRLSEKRRGRIPSDKKEKVSSHRLKSGDEIDGTSSSTATATTATTTTTTTTTTTTTNKKSRRSRREKKKEKEREKQEKEKHIKTKDEQKDREKKEKAREKELEKERKREKERIKEKERQEKERLKKEKELEKNKKKEKKLLKEKEKEIKEKKVKLKNQENIIEKDLTINNTTTKTTKSKKSSSKVKKSEQEGVKLENVEIEDEEVEEEEEEEEEVEDEEEEEEEEEEEEEEEEEEIEEVEDNEEEKRKEERRRRRRKRRILRRRKKLRRKQRKRQLFLQKQQQQQLLQQQQQQQQQKLLQQLKKRDESNGLSYKEIITPEWRDISSFANNDPSLPSPLLLSNPLLAQDIKNITTTTTTITTSEPISKFSTITEEELLIRQTTNGIDGTPMNGIGEDSESSGSEIELDEDAMKIIHARNEIEEKRRFFNTIKQIQMENPVPSYKRKKESLPVEFVAPTVEELLPSYHFNKKSIKLLGKSWNGDFEYYSSSDEDDYDDSDDYDSDDDNDDEDDDDSDSDDEDESDSDDYDSEYDSDLSDSDDSESESSDNELDGLYSSESEINHNSSGDEDEMDVELNNHHIPSKNSKNSKKQPVNNNVNNSNNLNGSSGGGKINSKPSKQQPRNSKANPPSKQQPTPLKQQPTPLKQQPTPLKQTTTPSKATPSPKQQSQQQQQQQQQQQQQPQQPQQPQQQQQQSPKPTPPLVSTTPPLSSVPLSPPTKTIRSTRGVSSLSNSTSSLPKQTNTPPISILSRKRNQSQSSVTDAPLSPTTTATTTTSPKPTTRRKGKLQETIPVEETKIIEETKPFEETVPIKENSTTTPLKRTRRQTKQQLVNGETTTPLTNGDNHVEKTDSNSTDVKVDPTSWWGDKQYKIQPVMEATVIRFKRVKNDDGDDDDQIQNNQKNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNINNINNTEDLESKIKETKSINIPMEISTNGNDFQMKEKEGE", "length": 1472 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54KU3-1", "protein_name": "Probable polyketide synthase 25", "gene_name": "pks25", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MDNSYLNNPQFDINNGNKEVTDDDNNKNNQDNLVAIVGVGFRLPSGENERNNTPQALWNNLINGFDGVVKTSERFNDNFFKNHEIANNYSGLLPLDEVKSFDPLFFGITPNEAQTIDPHQRLLLKCTWEALEDSLIDPISIKGTDTSVFIGSSTNDYLTLNRNEVKSNVFGSMAHSIANRVSYCYDLHGNSITLDTACSSSLNAIALGYDSIKNKKSKMSIVGGVNILLDPYPYKAFSILNMLSKSNGRCKSFDASADGFVRGECIGVVILKNLKDAIKDGNRIYCTINGASANVDGIGYSDKSNFYSPSSISQSENLKNAIQSTNGTVKPSDIDYVEAHGTGTPNGDPVETEGISKVFKDTRSTDTPLLIGSFKSNIGHCEAASGIASLIKCCLMYKNKCFAPNIHFKTPNPAIKFKEWNLKVVTEPIPFNENKNTSMIINNFGVTGSNCCLVLSQFNNTNKQKQQMKTKINNYLIPFSANSVESLKKYQSLIINSKENELKYSFEEFVKNQVFIKPTSLYQRSVIVAKDWNDFNNVENQVKYQTSSSTSSNITITNKNNNPITVFVFCGQGSQYNTMALELYKNEKVFRNSMDMLDNKMKNYFGYSILEKLRAIQDSDKRSVHEQTMAQPSTVIIQVSLYELYKHWGIKASFMLGHSLGEVTTAYCSGMIDIDQLCYLIYHRSTLQIRTNGLGKMLSINISSDEYKTNYMSRYPTIEIACYNSPSSIVIAGNEQILNEISKELKEKEIFSAMLGSLSSFHTSSQNIIKDDILNLNIQSSQPVIPTFSTVTSNLFNESTIFDSEYFFDNISKPVSFTQTISNLYKHIEDNQIGSNIVFIEIAPHPTLSFYLKQMIPKQSQYFRNGESISVYSTLHKKKNDVEEFQKSISQLFCDDAYDINFKCQFNNINSNIEAISNFNLPLYQWDDQHYWLNKSIEHKNNLIGPPISILGNSMQDSNPFIKSYQTIIDTGKDAFKYLKGHNVSDKCYFPGAGYIDNLLKLYPNQDLTINSIEFKTPLILSDDNGQFLQTNVYQTGKSDYRAQFHFKDNRTNVWVQTCTANFQLYNNGKVDKLNLEEIKSTKCNLSSIPWDKFYPHIKNRTGLNYKDKFQNTIECYLGDNCSLTEISLELPENFHDQESFFNTPILDICFHGSIVLIKDNCKLVLDKIDGFKLYTSNIPKNRFDHLSIFVYTTMKSTKSNSYNSTYTVMLEDGTVILEVENLICTSLTPVKDPLLIEIPTDMYYTPYLQSKDSQIQSPLEFKSIYQNNQDNDSLLIPNVVLETIKPLINEQMEFRILEFGGNNLSNSTLLLNSINSLLEENPHYEIDIEYTWSDNNSSILKDAKLELSKVDKGYLSILYRSLGLDVDNSLLEKQKLNPSYYDLIIVSNISNLTKDIKYSLNQIYQILTPNGNLIINEQQPNNENNENNEDSLKNLLVNCNFNSDIMMKSSSVSDSDIKSIIIQAQKPSLKLQPKTINTFDQVILYCNQDEQFQQQQQLINKFESHYNNNCKIIKVSTIEEFYKLSTTITNNSIIYFIKSIEQLTLENFKSITFEYVQINQKLYEFKSKCTHVLITYDSQSSNYLSSSILGAARYFDEIPTLQLFTFDFDKDSLINLDISVIDHLIDPKQNTLIEFFIKKNGKVYFERFKKGLKKNSFKSESYHQITNEQEILISKLDENLDYQLKSKDSILKPYDIEVEIKATGLNYKDYLVYSGLIKLKGDSVDFGLDFSGRVSRVGIKSSKEFKVGDEVYGIGQSTSSSHIIIDSMHACHKPSKITHVQAASIPAVYATSIHSLYNIGNLREGESILIHSGSGGVGLSALEILKSNNHSSPIFVTVGSEEKKQYLINTYGNLITGIYSTRDTNYQKQIKNKLIELGYETHGVDLIINTLSSEFMDSNFKCLNPEGRIVDLTITHLNPNEFIDNNKFKYNFGYHNIELYYCEKPTIKKLLQSISKSIENNTLNYLIPITEFSNSNIKKAIEYINERKHVGKIVISHDTDITNKLIENQPKIDYSLLKSNYKIKNLGKNVLVTGQTGLILDIINWIMKYNSTVENIIILSKSSMKWEMEFLINNNKTKIKFYYKRCDIGGDSDSINKTFDKLFTENPTITNIDSIFHFAVVQITRKVKDIDMKSLNISHDAKTIGAINLHNQSIKRDWKLSNFILASSILSKVGSLDQCGYVSACCVLDSFSKYRLSIGLPALSINIGAMGGSGMVARSELVETVLNGQGYNLTSTNQLLGTIDLLIQNPGQESNNLMVGNFNFPVFNNFKQKIHQKFDFIFNALDSNSENGDGSNIKNSTNIKDKFLNKVSEFLSIDSSKINNDIKLMNYGADSLITVQLKNWVDKEWSPNLITIHQIQSNSIGMVCQIINDNFEKKK", "length": 2380 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54KU5-1", "protein_name": "Probable polyketide synthase 24", "gene_name": "pks24", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKQNKINKAEILQVDDKHVEENLVAIVGVGFRLPSGSIENERNNTPQTLWNNLINGFDGVVKTSERFNDNFFKNHEIANNYSGLLPLDEVKSFDPLFFGINPNEAPTIDPIQRLLLKCTWEALEDSLIDPISIKGTDTSVFIGCTESDYHNINKNEVKSNVFSSLNHAISNRISYCYDLHGNSITLDTACSSSLNAIALGYDSIKNKKSKMSIVGGVNILLDSYFFKAYSSLNILSKSNGRCKSFDASADGYVRSECIGVVVLKNLKDAIKDGNRIYCTINGASANVDGIGYSDKSNFYSPSSISQSENLKNAIQSTNGTVKPSDIDYVEAHGTGTPTGDPIEVEGISKVFKDTRSTDTPLLIGSFKSNIGHCEAASGIASLIKCCLMYKNKCFAPNIHFKTPNPAIKFKEWNLKVVTEPIPFNKFKNTSMVVNNFGATGSNCCLVLSQFNYNTINNNINNHNNNHNHNHNHNNIKINNYLIPFSANSVESLKKYQSLIIENKEYESQYSFEEFVKNQIYNKSTSLYQRSVIVAKDWNDFNNVENQVKYQTSSSTSSNITITNKNNNPITVFVFCGQGSQYNTMALELYKNEKVFRNSMDMLDNKMKNYFGYSILEKLRAIQDSDKCSVHEQTMAQPSTVIIQVSLYELYKHWGIKASFMLGHSLGEVTTAYCSGMIDIDQLCYLIYHRSTLQIRTNGSGKMLSINISSDEYKTNYMSRYPTIEIACYNSPSSIVIAGNEQILNEISKELKEKEIFSAMLGSLSSFHTSSQNIIKDDILNLNIQSSQPVIPTFSTVTSNLFNESTIFDSEYFFDNISKPVSFTQTISNLYKHIEDNQIGSNIVFIEIAPHPTLSFYLKQMIPKQSQYFRNGESISVYSTLHKKKNDVEEFQKSISQLFCDDAYDINFKCQFNNINSNIEAISNFNLPLYQWDDQHYWLNKSIEHKNNLIGPPISILGNSMQDSNPFIKSYQTIIDTGKDAFKYLKGHNVSDKCYFPGTGYIDNIFKLYPNQDLTINSIEFKVPFVLTDGIGQCLQTNVYQTGKSEYRAQFHLKDEMNNQWINTSNSNFHLNSNDNYHEEKQKLDIQDIKQTKCNLSSIPWDEFYSLMKTQLGANFYGIFSKVVECYIGDNCSLTEISLELPENFHDEQSFFNCPLIDACFHGTVILYIQKNCKIVTDKVEGLRYYASNIPKNRDEHSSIFIYSTLKSSPSDDLLSSSIVVMLEDGTVIIEVDNLVVKSLTPVKDPLLIETPSDFIYTPYLQSKDSQIQSPLEFKSIYQNNQVDDGLLIPNVVIETIKPLINRKMEFRILEFGGNNLSKSTLLLNEINSLLEENPHYEIDIEYTWSDNNSSILKDAKLELSKVDKGYLSILYRSLGLDVDNSLLEKQKLNPSYYDLIIVSNISNLTKDIEYSLNQIYQILTPNGYLIINEQQQQQQQQQQQQQQQQQQQQQLLNNENNKESLKNLLVNCNFNSDIMIKSSSISDSDIKSIIIQAQKPSLKLQPKTINTFDQVILYCYQDEQLQQQQLINKFENHYNNCKIIKVSTIEEFYKLSTTITNNSIIYFIKSIEQLTLENFKSVTFEYVQINQKLYELKSKCTHVLITCDSQSSNYLSSSVLGAARYFDEIPTLQLFTLDFDKDSLTNDLDLFKTIDYLINPKNNIQREFYIKNSGTVYFEMYKKELKNLKNSYKSESYHDLSKQQDQLVSKLDEHFEYQLNSKQIDLEPYEIEVKVKATGINYKDYLKYNEMIKVNEAGIGFDFSGVVSRVGIKSSKEFKVGDQVYGIAYETSSSHIIIDSLLACHKPSKITHVQAASIPAVYSTSLYCLYDVGNLRDEESVLIHSGSGGVGLSGLEILKSNNHSSPIFVTVGSEEKKQYLINTYGDLITGIYSTRDTNYQKQIKNKLIELGYETHGVDLIINTLSSEFMDTNFKCLNPKGRIVDLTTTHLNPNEFIDNSRYRYNIGYNSIEILKVGKSTIKKLLQSISKSIENETLNALIPITEFSNSNIKKSIESIKERKHVGKIVISHDTDIIDKLIEKESMIDYSILKSDYKIKNLGKNVLVTGQTGLILEVLKWITKYNSTVENIIILSKSSLKWELEFLMNYNNNNNNNNNNNKIKYHFKKCDISNWNLINKTIDQVLKDNPTITNIDSIFHFAALQINKKLKDIDMNSLNVSHSAKTFGAVNLHNLSIKRDWKIINFILASSVVSVLGSFDQCSYVSACCVVDSLSQYRKSIGLPSFTINIGGVSDRGYLSRHKLVEAVLGGQGVELISPNQLLGTLDLQIQNPNMPTNAFVNNFNWPLFKSFKQKLHQKFDFILNPINVDNSISMENDTNQSSSSTNVKNKFLNKVSELLSIDPSKINTNIKMINYGADSLITVQLKNWVDKEWSPHLITIQQIQSNSIGMVYQIINDSLDKKKKEMDEKLLPITAKTTTTTKNDPNDKTEYKYIAGGDCCREFSIKFHYSSVVNFII", "length": 2471 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54LI2-1", "protein_name": "DNA replication licensing factor MCM2", "gene_name": "mcm2", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MSQNNNNNNNNNNNNNNNNNNKRKTKTPSSVNHNNTKINEDKDLYNFIDKIRDKTDKSHLEDEYDEDDNTKDGKFNKVEDEIKNDIDSEEDDDDIIEDNEHLYDGDEDSENLSSEGEGDDLLDEDLQDQDEEEVLGDEDNHYEMEGLDNETYEDIDKDKKTEVDSILTKRDREEQKTRQATNRHQYRISSFLLDENDENMVDEDTENNKLLEKRKANLIKKRRETIRQQNDNIKKDYDGSVPSFKDGFVNSERYFEDGDGDDDDDDDDFDIGDNGQVVNLEEPDKDKCLREYVCMSGPRNEISKQFAKFLLEFKEKDGFNPIYQESIQKMCAANKESLMINFTHLCASTVFGVWVAEIPTEMIEIFDEVALKVVLRIYPNYRNIVKSIHVRITHLPICESLRDIRQSNLNKLTKVGGVITRRSNVYPQLKHVKYDCVKCKTTLGPFSLDGTFNDSKPPIGLCPQCQSKGPFVMNSEQTVYRDFQKVTLQESPGTVPPGRLPRTKDIILMDDLIDTVRPGEEVEITGIYKHNFDLKLNYSQGFPVFSTIIEANHINKKEDLLSSFILTDEDEREIRKLSKDSNIAQKIIQSIAPSIYGHEDIKTGLALALFGGTPKDVNNKHRIRGDINVLLIGDPGVAKSQFLKYVEKTAHRAVYTTGQGASAVGLTAAVRMDPLTREWTLEGGALVLADRGVCMIDEFDKMNDQDRTSIHEAMEQQSISISKAGIVTTLTARCSVIAAANPKRGKYDSGLNLLQNVELTEPILSRFDIICVVKDTIDSFKDRELARFVVASHINSHPDNQNNPENDYLNRATKQSPISQELLRKYIIYAKRIKPRITDIDKNKISQLYTDLRRESRAGGFAMTVRHVESIVRMAEAHAKMHLRDYVTDFDVNTSIRVMLDSFINAQKNSMYKNLRTKFAPYVIFQKDINQLLTQLLQTLARDFSNYHFARSGDIPDQINIPYDDFDTKARELGISDITSFFRSNEFTSNNQFTLKKDKSTIIYYRNK", "length": 1008 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54LX5-1", "protein_name": "U1-type domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKITESNNNNNNNKKDNNKHWCKYCKIFIQDNISVKNHEEGWRHKNNVTRFVSTQNRDKKYQERDQKEAEREINRIKNTGARSFREKDLSRVLDEKKHQQQPQQQPQQPQQQQRIFNNNSNNNNNNNNNNNNNNNNNNNNNNNSNNNNNYHQPQYPTTTTTTTTTNTTASNKNCDNADSKFKEIQEQQRQLLSNNDYYNYYQDRQQLIYDYYQNEGNQPIPEPPLNTSLYGYTESPLLKSRLDSSTDTLSSSSSSTIISPSHQKKRKQDDTNSPIPAKISKDECVNNENKDKSNEKENELNNNNNNNKSGEGEEGEESDDNDDDEEESGSGSESESESSEVDQSESIIGQWQTVDPIESAFGSTRKDSDDEKDKKDKKNKKDNDENKRDEKDYSDVSDADSEEESVNITKRAMANHKKPITLTNVISPTIPSTSKNFESVLSFNKSGVFSLNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNEPPQPTPQITLKFNKPLKQRNTRKTNIEDKQS", "length": 514 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54M95-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKLISILFFLFGILFFLKNVESASDVVCSFGYQACGNNCYSPSSGQKCYPGGVVCSFGYEACGNNCYSPSSGQKCNPGGVICSFGYQACGNSCYSPSSGQKCYPGGIICSFGYEACGRSCYSPSSGQKCYPGGVICSFGYQACGNTCYNPSAGQRCFN", "length": 158 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54N59-1", "protein_name": "G domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MDLDYAIIVLRHHLESNGRFFEISKDDVKNRVTIKNKLTQEERYIDFGEIQNFIQYDEFEYNLLANGFQENLSILKNSILPLTKAPDSCSSNRGKTIGNSSLLINKVNGLIDDDKDTIYLLLIGITGVGKSTFVNMVVNYIEYSNLKDALENATLEQIYTIASKIEIQDENKTHKFSLGDVEDYKIGSSVTQYSRQYRIKLPDGKTLCLIDAPGVGDPQGTLQDNKHFENILHEISSLKKLNAICILMRPDETRATVLFKYCLNQLLLHLHSSAKDNIFFCFTHTRGTMYKPGPTRAILEDHLKKMKDQSDIEINANEKTFCFDNESFNYLAVKKYNATAGIETNFSEDDEFDFGRSWDRSSKEFKRLLEEISKVQPHDVANTICINNARTMISNLAQPMSTCISNINTNIKLMEQQSEKLRNNSIGDESLLYIPVSVVIAEKLENSLLVCTKNGCSSNTDNPCNIDVVSPKWYSSLYWCDNINKMGTCKKCSNTGVLPCLWFDHQVVTIKETPQLNQLPGTDKKTIGQRTKSEIFNERELLVTKMGERKIQFQEEYDTIKTAIVDFSVFLWHHSLIKFNRYYEDYINMQIKQLENSENSQELIQKLNEHLSEYKASVEEIKHNVQNNKASVKTQKEIFATFDKLLTLPNVGYIIQNQIKLKQSSHYKSEAVEIDLFSKMKNKTKQIIK", "length": 689 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54ND5-1", "protein_name": "Multiple inositol polyphosphate phosphatase 1", "gene_name": "mipp1", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MMVKIKNIIILFCIFGLLSNVSSLSSSSSSSQSSDNNGNLSPIQDYDLEFLSKHLTTKTPYWILTKNGDSNSQGDGSSGNSNSNSNSNSNSNSNSDSSNEPPEQCKLISIDFIARHGSRMPVLNSIEKLKEMTTSILEYKEQVNQGFNWIFNYSVPYPSDIAGNLILQGQYEHYNISKRLLKKYPLFFEPMKYKPQSYSITSTAISRTGISASAFSYGLLQGTGSLGVDGFQPVFIETASLDQDILLRFFATCNQYVDQLKNGTLINKDEQTKWNQMVFPNISNEISERLGLSDIWLPTSNVISDIFEACAYEISINNISDHWCSLLSKQNILDWEYSQDLSNYWLKSYGHEINYQIATPLLNDILSGFDIYINNNNNGSSSSSSSSSSNNGDNSGSNGSSGSGSSTSTSSNDNGSTNNNDNKVEPTSILRFGHAETIIPFISLLGLYKDEQKLFANSSTEQIENRKFRTSVVSPYASNIAMFLFDCGSAADGFKILVQHNELPVLVPGCDEIYCDYQQFKSIFKQGIDNFKWNSYCNINDDDSGSSGGDSGNGNGNDSHSKKSSYFLAIFIPITFLVGGTIGGIFTYFSYEKIMQVKNRKKLTQYGNDEFISSPKSKSFSFKPTKFDSRSPLIQ", "length": 635 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54NT2-1", "protein_name": "SH3 domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MSNKITTQFARTRQMLFTKTGHSEETIDVQYHYEKERTFSTEERLVKIQKNSKKLIELYKDLNKITTDIAQDACDLYDTQDPMWTPGSKLRDVATNNDKHLLDYTEQMAEPYTKPLSDYISQYKEARKRTEELTTRKVDMDRYKNEVGKLREKGAGSSSKAKLAPTEEKLRICKEGYDSLHEELLNDLPRLNEDKLIFIDYLVASLIKYQSEFHKKVSYEWSPLPSLTKHVDEYSGRDHQPVITSVERSAASINLRSDPVFKSNASIKMKPGAQDQQQYSTVDKDIHQSPNPSNLNLQKSTPNPYGGASAPPPLYGGGGSSTATALYDFTGVDSSELSFRAGDIITIHKSEGEWWEGELNGIYGFAPGSYLRMN", "length": 374 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54PW0-1", "protein_name": "Annexin I", "gene_name": "nxnB", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MEYKEKEINTSSPSSPSKTQISNIENDSISEKAQEPISEKVQDPISEKAQESISEKEHIESNNVSEIIDLIKSGDQHLNNNNNNNNNNNNNNNNNNNEEENQEINYNDNQLSNEEIVEDVKNSNINNNNTIEKGNSSQNNNKNNNNNYHTEKCDYCLICKCYDYGEITHNIVEDSEILKQSIRYSYVDDTSINSILAHRNYAEKEAIMKKFNDKYNKSLETELASHTHQKYRRTLISILTEPSIYDTLNIENSIKTKNSNTLLEILLTRTNEQKELIKRIYLVKYGKNIEHDIIAKFSNGANVNGNMMKQLLISMLNNDRDSNSNQSLDMNLINTDSNRLYQAGEHKKGTDHEVFIEILSKRSFSHLSELDRVYENSNPKGHSLRKAIELEFGVSKSIKQVKISLLDILLFSKEPSKYWAEQFNRALTSGSWGINEIDLTRLTITQQHQASKIKQAYISHYDNSLINEVSSKTSFRYKKIILSMLTV", "length": 487 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54QB4-1", "protein_name": "Kinetochore protein Ndc80", "gene_name": "ndc80", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MHNNNLTYQQYQQQQLLIQQQQQQLLYQQQLLQQQQQQQQQQQQQKQYSHGRPSTLGLPSRKPPPMQPQPQPQIQAPIQLTFQQQQQLLQQQQYQFNNNLNTINNNNNNNITNRHSMVTPSTNLGGRSSLGPPSAMLTNNNNNNSNIRNTTFISNSGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNIINNNNNNNIHTQVQPKKSIAPSKSNTISSNTTTTTTAASSSSSSNPSITLRQETRPVNDSKFQSQCLLRLQQFLSQSEKGYPRAITKDNLMSEINGLMKFLCLHIDPHFKLPTEKPEEEIISFFKMMGYRSAGFTKRVFSQVGNAHTRGHLLGAIIWMVELIEYDQIIRQMDSHIEREILNGNTIDENGNLTTTTSATNTNEDGNFNLTTQIFSKHVFKSYEAFLKGDDGNHVDQFLEEKFNEVNELIVKECEESMERQKKIKQEIVNLTQYITNDDIDQLNFKLEQTNQEIIATHDLINDNELEDQKLDQEIDQNQTHFQELEIQQKEHQKKKQEFESRIQIQQSNSVDAKRINQETFELKEELDKVQREQSRHDQLKQEKSKEIKQSINEIEKLIQSYKEICCKASLVTNDNLIIEKYRIIFTHTLNNNNNNNNTNNSSILNISNNIINNNNNNNNNNNNNYEEGIISISDLKLVIKNLQELNLEISQNISKIKQDLLKTSNLNDIQKESISDKELELARIKQKHDKQKNILKQEKQDQTFDITQREENIEQLKSSNKKLIDDGVRELEKTIQLLESQREEHSRLKIDLKQSSEQMKLQYLKRIERFISHRQLIGSQIFDTLRQMEELSLTQKILFPPPPPPPQLSQQHQQLMQQQHQNNTIDIDE", "length": 855 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54QD2-1", "protein_name": "Probable cytochrome P450 517A1", "gene_name": "cyp517A1", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MEIINVFLFLIILFLVKDFVKKNKKIHTKSPSGPIAFPILGNVVQIRFWELFKIQEHELFGGYSKKYNGVVRAWFGERLFFFVSNYDVVKYFQKDENFHNRPSVLVPGWRYASSNGLGVMSSSDDKWKRAKSSVSQSLRVRTTKKLMEEKAIEFIDSLEKISNNNEIFYPKGHIQGYACSMLFKYMFNQDLSVESGMSRTIGNAVEHVFGNLSKLTAFDCFEIFSPLYDWFFTRRLKGCDIVRQIISSQNENHLKSIDPSKPRDLMDDLLIEYGLNEITKEDTMQINQICFDIFGPAVGTVTITMNWVILQLCNRPELQEIAYQEIKKAVKDDEYVNLNHKQNAPYIVAFIKETMRLCSNGFGLPRTAKNDQICGDFFIPKDAIIFINYLEISQNEEIFKNAKEFNPTRYLDESLPVPNIHFGVGQRACPGRFVAIDKMFLGISNLLLKYKLKTQNGEKIDDSIQFSVSLKAKDYGIKLEKRI", "length": 483 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54RM4-1", "protein_name": "Peptidase S8 and S53 domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKVILIYFIVIYLINISFSLKPYQQQQQLHNFNIIENNNNNNRNEKVIIAHPKIPPYWLIENEISNPNDLISFKILLKQNNLNKLNYLFEEISDPKSKIYGEFLSINEINELVKSSESDFNVVLEYLKSFNIGNIENGSEIKVFSDYILVETTIEKVSSMFNSKFSNYKNKNNGNTRNRLNGPAYLPKQLLNSIDFVTGLSEFFENNFKIENYLNNNNKNNGDSDSDSGSGSGSGSSNSYNGGLDDILITPKVLKSYYNVPNELIGKFENNSIGVIAFNDYFSMGALELFDEKFNITTTKDNLKIIGNDCLGKGCDQYESDLDIQYIRSMGENISTDFISFNDAQWILDYLHSVLLMEKPPLVQSISYGWAELLQCDVSNGCSTFGYDSKQYVDRTNSEFQKLALLGISVLVSSGDDGAPSMGGSSGNCPIDGTVYCPTGGCNHTKTMCPEFTIYNLNGGSDSGGSSDSYCFFPMGIASSGCTNILGDPSVLDSGMKIFSEKNKQCNLAIEYDRTNLPHVYSECECKDLVNVTFRNYHFTQYQFNENNGALFVAEYPSSSPFVTSVGATQFLSRDEKITTEVGCTILQGAKITTGGGFSSFQSQPKYQQYAISQFFNTSFNSLPPSFSYCPTNRGVPDISMVGHNYKIYSSDGNNKDFNQCPCKSLPVDGTSCSSPTLAGLIGLINDQLLLNGKTQLGFLNPLLYQMAIDEPRIFNDITGDSSNRCSRSYCCLYGWSTSSNTWDPVTGLGSIDFNLFLSYVLKLKGI", "length": 767 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54RX1-1", "protein_name": "Translationally-controlled tumor protein homolog 2", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKLYKDLIGNSHDDLLTDRYEIKVGDVTFEVKTKMITKDLNVVVNNNSLGGSISTTVDNNNSITLSTNLEDEFENVEAAGTFQINNLVEQLRLVETSFDKKSYLAYMKLYIKDLINHIKQQPSNSDNEKIEHIQKGIQSFVKTMMDGENFKKYSFFTGSSMDANGLVALMYYKDDDPTTPTFVFIKYGLLQVDV", "length": 194 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54S19-1", "protein_name": "PHD zinc finger-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKNCIVCSKVGQYPLNLVKCYECKSYYHKFCLQSTKIPRGEWYCSSCEIERKNKKNKKRKLDGAGKKNKKNNKDDDDDNDDDDDEGENDEDDEDHQDEDSGEEEDEEEDEEEEDDDDEEEEEGNEKNKIKKRKRIPINQSPSIKKRTKDIDSEEEEEEEEEEEENDSEEERRIQKRKNKIKQQQQLKMKEKKQREKLRKRRRRTRSSRKDDNDQDDDDDDDDNNSNNSDDNDQDENKNKQKRKRRKDKKKDDDDDDDQEEEEEEEEEIVTGKRKRRSLNKVQPNQHLNNENEEDNEEEEEEEEEEEEEEETDSSEEFLENLVCSSCNTGKDEDKILLCDTDNCSRGYHMYCLRYPITSVPKGDWICDFCRFGDISADLHSADDDEDGAINSQKEIEKQKQKQKEKEKEREREREREKEKEKERERERERREKEKKDALRSSFSNIPIPKINNINGSNGSNSNNNNNSNNNGSGVNRQSPPKVISKKSPQQSPKPLKSPTSSSSSTTSSPPPLHQQSKVTSKISPNSQQSIPTINSNINKSPPSQSKNSPPLKPLTPDLKKQIPITNITTSSTTTTATTTTTTTTTANTSNVATTTTLLKPSSQKKPTILSDKKQLNTSGTNLPMNGKKKEDLESSASHSILDMIPPNNKLFNNSIQSAPISWDLSGSQHKLSTSSSSLPNSNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNIKLQQQLQQQQQQLHQQLQQQQLQQQQQQLHQQLQQQKLKQKQIEEEQEKEREQKRLENEQKLLLQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQEFIDQKELEDKLLSQFDNQNLKSPLSLTSTTSSTLSHLPQSTFESSTILSNKTIKQKWKSRILFETDQICQCEIIQIYGMDFKVNPFQNNITSKTLELSFNQVSFDNLPKPIRDEFITKSSTPSTCLDIGAIDLPNSALLIFLPEIPNQSSLYHLIIHFIENRVAGFIDLSNDLSLYIYPYQTSIISLDLIGILIDKKSLSPPSLILNQQQKQQKQQQQEQEQQNQSFDIKNICYIGINHISMNKILTSQGKNYFSFSNFNELTLSSDIKNFDLVVVDNKMVNNQTINKEINNLMQLQPTTNNNNNNNDINNNHDTLLLVIKDVEFSKWLVSQKKFPNSLEIQKIFQQQILFKQSRCIFLLDNSIIIENESSYFVEFISSFGKFKNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNSSNDWTIKISSTIFDELLPFGHQSNVKKKIDEIKRGINQQLIVSYDFSPMVPKQSSDFLLLALRIAHSKKYKQVFLITSNKIIQNQSKRYSNLNLNCLSLEGGIDYIKNINNKFSLKI", "length": 1361 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54S56-1", "protein_name": "Reverse transcriptase domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIAKTQIKCTTIYAPAKSNERHEWYKENLTEEILHSDIITGDFNVDCSVDNNLNKYIKTIFDEFEFTEIKNGITFPRNKSTIDRVFVSKKILHLNPIVTTKEIKLKSDHNMVIIELKIPEYEQQKKGERLWRQNLETLKMNSTSLKINKTIKYYNKKFEENTSKWYKLNICEQWLKLKDEIKKLSINIEIRESNKTKNKLKELAEKLETAKDSRAIFLKEEINNILKEQVRIKQANQTNTHINNKETPSKYLTRRLKVQRKTNEIPQILDPSNNCLVTKHEDILEVARRYYENLYQKRECNEDTHHELLKTFNKRIDQKILDEINQPIEGYEIRLGIEKIQEGKAPGKDGLLPTFYKNHINEILPIISKLYNHFWNTTIPKDFKQGILITIYKNKGDPNNLDNYRPITLLNVDYKIYSKIINNRILKFLNKIISPFQTGFVPRRLLHDNIITLNSTIEIIKREINTKEDMEPIITFYDFEKAFDLFSHNAILRTLAHLKLPLKMVLTIMNLLNESETSVYINNSLSKSFTSKRGTKQGDPISPTIFALVGECMATTIINDRCINGVTKETIKILQFADDTATIAYNFMDHFLMNEWIKKFCQATSAKINQTKCSCITFKWNTRTLYTVIKSNERYLGFDFNNKGIKSKINTISDNIRAKLVTWNSTSSTYMGRLIMAKTYALSQLTFHTYINTTPQHNSIENNIVKFVFNTKSKNSLSLQRRQNNYINGGLNLWNLKTRELAQKAWLFERYLHQRVSNTPSSYIKLWEEELKNNNNNKTTTKQNQLQLHWQCKQAWTQLKTPQNKQTHYEHLPKLKKIYEDMMTTQSPEHNKFIPTPGQKEIMTKINSKHLPFKEIKKIINMKGRDLLWRYTLKALPKIYNMPCQQCGEDETSEHIFFNCKAHIKNTQEIFNYTLTKCGHTTHTWNVKILNHLQIALVANLIAIIFDKIWHKRNKLIHDEKEIIIHRQQVIRELIKTQRAAWDRTQAVINKTLRIKSKQRPEEQNKLDSLISLKLLQFSRQWNSPLHAIELPKHLKKYNNSLSTFYK", "length": 1047 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54SW0-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "NQAKSSTIQQPTQTQQSNINNNTAKPRAAPPLKLVITNSNPSLKQKPQSQQTIPQQSVPQQSIPQQTIQQSVPQQQPNQSQQVNVNRTINPQQQQQQQQQQQQQQQQQNINRTAPLPQQSNYKPQPGVIYQQQQQTQYRVGTPLTINRSPMVGMVSKQPMSSSQQQSQSQQNIQRVPCQGKCCAGLAVKPLVPINSITAKPPPYSTMGPRGPISGGFVRTSPTGAIIGPSPQQQTMSRAMVNSMPIQPQIQIKPKPSPLNNGGIPITTTTTTTTNPLNKSSPSTLTQSSNTLASSNNNITTSNSLSSSTSSLPTTSTTPTTKPKSKPRSKSNSNSQTSSSTTSSSSTPSTPTTNSTKNKENTTPNKGDDSGTDNEKSSLSNSSKLLPTAYTMDQVLPFNPNQMFLGPEDKYIKSATRTYHKIPTNPSVMSNNRGAEIPSSLEYILDIPIIHDEPSSKNNPTWGRLILDALRRLVANKKTTRITERLKLDNMYKDMDSRSNQDKLDWKNGLVNEAQLNYLLSFLSNTIPFPDTPEKNKNKYLSSSDSQIINSNDQSNSLNSNNSSNNSTTNNNNSSTTTNSTNNIINNNNNNNTSSVPNSTNNSNNSSPEQQDVIDMELKLEPDNSMNFPIEINMDSLGSYIDDSFTFDNSSYDDTATISSDDKNLPITTVMPPTTSTTSTPQTITNTIPTTTPTIISPPTITTTTTTTKTTSPPTITTTTSPPTITTTTSPPTITTTTTTINSITPTTSTSSTINSNTTPMLDIVIDPVISLELLDENHQQQQNKEVKEENVHSKQQPPQQQQQQQQQQQQQQQQQQQQQQQQQQQQEDFMIQVQTSDLETQTQIQQDKEEIQVKPIVDSKKSGNSPTQIQQQQQHQQQQHHHQHNTLTQGFEFGMMMDIMNSPSSTSSMKRKRDDVDQPINQINNSSMVVQQNNDFFSDFNTIEAPFSSSHHSSQLSFQTPFSPDIVIDSDFQNKKRIVS", "length": 981 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54T36-1", "protein_name": "Probable polyketide synthase 19", "gene_name": "pks19", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MEFGNKEIAIVGIGFRIPQGKESINNGSVSHLWNNLKNGFSGIVETSERWSDNINLLGEVNNKFGGLLPLKEWSDFDPVHFAINPSEVPLMDPQTRLLLKCTWEALEDAFIDPIDIRGSNTSCFIGCSTLDYSTTNRDFNETSENYFASNVLHTISNRLSFSYDIRGPSMTIDTACSSSLNSITMGFQSIQNGTSNLSIVGGASLLLDPYVSKSFSFLNMLSKKGKCKPFDSEADGYIRAESCGIVILKPLSDAIRDGNNIYCVINSFSSNVDGGGLNDKSNFYSPSKQSQSDNIKLALKSANMKASDISFVECHGTGTPTGDPIEVEGVSMALNSSTTSTPSKPLLIGSLKSNIGHCEAASGVASLIKCCLMFKNKHYAPNVNFDQPNPKINFKDWNIKVVTEAIPFTNINEKPVSMVINNFGVTGSNCCLILSQFIEHSISLNGNNPSYPIESQQQIFLIPFSANSVKSLKNYEDLIINDNNLSTNSFKEFVKNQIYSKSKKLYQRSVLISSNWDQLKTKNKYFKTSNDKSSNITIKRNQPLIVIVFGGQGSQWNKMAQQLYECEPIFRSSMDKFNKELSKYYGYSVLDKLRSIKDDDIISIHQPIIAQPSILMLQISLFELYKHWGINVSFIVGHSLGEIATSYCSGMVDFQTVCKLIYHRSISQNNTNGCGKMLSVNISHSEFIELYSNKYPTIEVACYNSPTSIVIAGNENILKEISLDLKENNIFCAFLGSLSSFHTSSQNSTKNEILPLEIPSRQSTIPTFSTVTTNLFNHETTPFNSSYVYENIIQPVRFSQTISNLYQHIENNKLGNELIFIEVSPHPSLSFYLKQMIPKSSSYFNSVSVLTSTNKKNSNDLDEIHSTISQIYCLGYDINFKCQFNHNDDDVNSIRNNSTIILPNYQFDEQYYWKVDINFEQYRLNGPNVFNNLGKSMINYSSNNKSYESIIDINRNPFKYLKDHIVKGKYYFPGIGYADNIMKLYPNKDIVINNLEFLAPFVLKENVKHILQTNVYQLGNTDYRVTFNIKDNKANQWVQTCTGNFQLISLKDNNNNNNNNHSSKYNINQLLSECNFTTLSKQEVYKYSKLRSGITHLGTFQGIEEFHFGNDLTIARIQINYENFDINGKPVYQTFDKSFFNIALLDNCIQAITGFITNSSQFVFERLEGLKVYSENIPTDKLKYKNIYCQAKFISLEADSYKSSVLVLLEDGTKLLEIEHISFRSTLPLIDELLLNNPTNELFTNNLQCKDSLVNILSIDNNETSSSSGSSNTVTEIIKQTIKPIINEKIVFRILQSFSDSELSKQIIEALNQIFDNSLQEIDIEFTIIDNSNDKLPTLHDSSLIFKNDITQLKPSYYDIIINNNNDETIIKPIFNILSSNGLLLLIIEDDIGIRFNINNLIGVGFNENKIQKSNKVIQSQKSTILSNELTVVPNNKNDNIIIYCEKHSKYTNEFKKLISNNHTNRKQTTISNINEFNQLLPSITNDSIIYFIKSMEQLEMNNFKQITMEYIEINQQLLKHSLTCKHVLITIDSQIKNYLSSSIIGASRYFNEFPSLNLYSIDFDNQLSISSLLNKIINQLIENSNNHIQREYIIRNNSIYYEILKNEKNIKSNFNSNSFEDNDFMTLLDSTNLEYKLASKPKKLKKNEIEVKVLATGINYKDYLIYRGLVVIDENVSISKNPLGLEFSGIITRISDENKNCEFKVGDNVFGVSHDATASHVITDVLYVSHKPNNISHIEAASLPIIFSTCLHGMFNIGNFNIDDDEVILIHSATGGIGLATLEILKWKGHKSPIFVTVGSKDKEQYLIDNYGSFITGIYSSRNKNYVNEIKSKLNQLYGTTGKFNGVDLIINTLPNEFTHSNFLCLKERGKIIDLSITHLNNNEFLNFNNFKFNKSYHNIEFMHINKRVVSRLLKSISNALNENKVKLIPITTFQIENVKEAIEYINQRKHIGKIVLDHSCSNGSIGSDGLLNQLIESDNNEKNHTILKYDFKIDTKNIIGKNIIITGQSGIILEILKWLIKYSPPTESFENIIILSKSSLKWELELLINKTISRKDNNTKFHFKIVDVGDSIEMRKSINQILLENPNIDNIDSIFHYAFTQVTKEVEEIDIESLDISHNAKTMGAINLHEISIEKSWKLKQFVMASSIASLFGSFNQCTYVSANLVLDSLSRYRKSIGLPSTCTNWGTIKSSGFVSRNDSVSKMLDDQGFIPIPTNIILGSLDLQLQNSNKYSNLIVSKFNYDSIKKFASETSTFQRLDFILNSIKEKDNDNNGGENISISESIQMKFLNKISELLSIEQSKINTDIRLGEYGADSLTSVQLKNFIDKENKSNVITLQQLQNNTIGVNIQIILEQIKKLDSNETKGKSKKIIKKDSAPSLEYWRNEMKLDESIQAIKMNPIDFRNDSKVFLTGATGFLGVHLLSNLIKSPNCSVVYCLIRNKKSEPNPINAIINNLKHHKLYHFHNEFELSKVKVIVGNLASPLLGLSKLDFGFVSNQINLIINSGADINLASNYEESKVVNIGGLIELIKLSTTGDYQKPIVGFSSISVFFESPNCKEFDEETVIPTIENINNLPGGYMKSKVVVENLFREAAKRGIPSMLIRLPIIFSHEETGIGHDSDFFQLIIQSCYAVKKYPNIDKNILTSPIGWIGLNTIKMIGNEKCWNKSSSNQLNIYSLNSEVSSIKSSFSFLEKQYGCEMVEYEQWKNIINQSKILSCIKFKTFHSLDRLNGVYNLGHGFGVSKKTKELLQSMNSYEGGMVNEKIIQNHINYIFKN", "length": 2778 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54TD0-1", "protein_name": "Peptidase S8 and S53 domain-containing protein", "gene_name": "V4-7", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MISKTSLLLLLLSIVALASAISVQRVPIADVTSAPAHFVQNKLAKSYELVQFKILLKQRNLDILEEKFWDVSSPKSENYGKFLSKEEIDSIVAPSPKDVKVVVNWLIDNGLSKNEMIVHSDFIQVRTNVGKASTLFETSFAHYSSSRTALKRIRVVGQASMPMHVLAKVDLVLGLSDFIEDNKMSESMRATKKQVQGSTVSITPAVIKQYYGIPTGQIGVESENFQSIAAFSDFYSSGALQFFDQKFGIDSSTVRVKNVGQNCIAQNCDQMESDLDVQYMTAIGNNITTLFLSSGNGEWIIDWATAIQQYNPIPKIASISYGWAEVEQCEITNSCSTLGIDSVVYVARSNVELQKVGLRGVSVFVSSGDDGAPSFGAASGNCPIDGTKQYCPLGGCNHKSSQCPMITIMESNGTQCFFPMGSESNTCQSMLQNQNIVNGINEFVSSNSKCQVALEQDTQQNYHIYSSCTCDKLKPYSDSDAGFKIVGYSYDQDAGTLFQPDYPASSPFITSVGATQITDVTKPEIVCSVATGAIITGGGGVAITQAQPSYQADAVATYIKSGTLPPSYSYNATNRFYPDLTLVGHAYEIAVPNTLTSNTCPCALESVDGTSCSSPTLAGMISLINDKLIGAGKPTLGFLNPLLYQAAKEQPNVFNDITTGANNCNRAYCCQYGYTATTGYDAASGLGSINFKNFEQYVLSLN", "length": 702 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54TX3-1", "protein_name": "Reverse transcriptase domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MFNFERIDHGSGKGTGIAIENRDTRKGHISINFKDDDGRILSIKYNSFNSINILLIYAPATISERNTFIINSKSLFKKYNSINHQIIAGDFNNNHDCNSFFGTELRKIIDQDMLLDTGIEENTPTFPRSMKRLDRIYCHPTLLNQNSKLVVHNTVFNKSDHFPITITIQTNRETTTTTTTKLERLPWTLCKEILNNKHIHDGLSELISKNKDKIKSVEEWTKFKNNVIRDYFKKEQNKIKKEKNKRKYVIHKLLGNSDIIPKMRKELNEEISRILEEERKVKAWDIKLKLHLHQETPSKYLTSILKSRAKDKSIFQIKDKDNKTISDKENIAKRFVEFYQDQYEEKEDNEETHKKLLEKWEVDVDLIKKLEIDRPIRIHEVTKAIKTSSIHKSPGLDGINALFYKYHINSIARILTIAFNDLLTNKKEIPTKFKEGVITTIFKKGDELNISNRRPITLLNTDYKILSKILNSRLLDITSKIINKFQNGFVPNRFIQDNIQIMKEVIEISNKRKNNTLITFYDFNKAFDSISHKSITRTLEHIGIPPKFTAILLNLLKDTKNKIKINDFLVNGITIRTGTKQGDPISPTIFALVLEPLLIDIINDNTIKGFTLPNSKSLKLTAFADDIATFTNSTEELMKINTKIQKYCSATSSSLNKEKTVMIAIGDKPHDLPFQESTVPERYLGLNFTKTGLNSKYNTLIQEMKNNLIKWKSQAITMKAKMTILKTYVLSKLTYHQYMDNLNEEQIEEINNMTRWFLFSSVKNTYTEERKYKTMMKIDRAYADWKEGGIKLWDIELRHIAFKIWYMNRLLHNNYNNNNNTLQEWYMEQLSRKKAHTSTLNDMCRHWGVFRVKFYQNHPKINELPDCIRNDNDEPLKLKEIYELMIKDRHPTPRRTEWQKLWAVRYNTAIPKVFININSISHQKGRNTLFRFFSRSLPGINHERDTRCKICGHLFRDPYSHLFTLCQDILDIEKTIISTVNKLSFIKIHRWSMDTLDISKYNRTERIFPNLIGIIAHQLWKIICHKLFNTDESKPEPKFEQKVIETELLNLIETEKFITLKKIKHDEAILKNTNQDLHKYKFNKAWQTPAAPNPLPI", "length": 1097 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54U20-1", "protein_name": "Peptidase S54 rhomboid domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIYGDTREFRNIHFHLNNIRIVGAIFGQDGFIHKKIPLATKVISIICSILFALSLVAPSMFGSYKTCLSIESLTNSFLDNLYRIILSNFAHLSIYHIVYNMITFLDLAKLERLTFGTLKYFYLLFLFGIITNLICLFIYFIGRNNVCHLGFSGVLFALIYIESNSSGRDVFLFNAVKIPSKLYPWAMLILAHVFVPRSSFIGHFSGIVVGILFIKGYLDIFILSNQKLSEIESSQLMNIFTTKNSYFPIIKFGGSRRSYNTDRKSLDGLFFELKNLFNPQQQQQRQQQRQQQQPQSPQPQQPQQPQQQPQQQPQQQPQQHQRDNFRNDNNDNSNNYDEYDFSK", "length": 343 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54VC1-1", "protein_name": "ABC transporter C family member 15", "gene_name": "abcC15", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIKKIKNIINKIINFFSTIYILCKIYLYYNIKNRYEAYNILSVYGDDDFFNKPCPEDSSNWKDKLTFKWVERIIFVGFFRAPLNLNDISDLPSSLKVENTAPLLKDIIFNDSTIPLIKHIYSKFLPRNYIATGLFVFVSVFSFITPLILKNFLSYVEKIDEQKHIYIGIIQCFLLFLSSFINMASQQYSYWFGFKTSLEVKGALETIIFEKMTKLSNLSKKNYNIGSMLNLMSVDTDFFQYFFCHYYIEIFLFPIQILSLLGFLIYVIGIAGFVGFLVMLITIPLSSFLGTQISKNLSTSMGYADTRISLTGELINGIKFLKQYAWEKMFCERIEEQRKLQLKYLYIRIIYWVLVQIVTQASSGLVLVSTFTTYTLLGYEVSLEIAFTSITILQNLRRPIESLPDCLHKFISLIASAKRIETFLQSSELQNQPFIHNQSGLNDILIRNINFNWNEHNLKLKNNKNNQNNNQNKRSIILSSGEQFEITNDFTFDGIDIQDDNYDYEKEYKINYNNNEEEENFMTDCLLKIKPLIKDRRLQQQQADYQDLLSINLPPPPSENVDFKAPKGLLTIISGGVRSGKTSLASGLLGEICKAVDKSSPDSVNSILSTIQQPFLQSTSFRENILFGKPMNMERYIKVIEACCLAPDLLAMGEGKDLTEIGERGINLSNGLKHRIQLARALYADSDCYILDEILSSVDPEIANYIFQHCIKGMMKGKTVILVTHQIQFISSADHVVVVDNGVLIQGTYLELLRMGIDFEMILKEKENRIEKQIVQLQEDEDYYEEVEILDFTMNNNNNNNNNNNNNNSNFNGNNKLKRSSISLPKGISIESIISKDFDQTTIEKAKLFVQEDRNKGDPGWIIYKKYIRMGSSISFFIFTCIIYLTSQIILLLSDYWLQSWASHDRLNVSEPTDVHYLLIYLAYIGGFVFTLGVRYLLIAKITFGSAETLHRSLLKSIIRAPLTFFEQNPVGRILNRFGKDISDIDILLLDCFSDVLYCGACLVTSIGIIIYISPYIAIPFVILIAINYIFQLFYNYSVLELKRIQSISRSPVYSLLSEVYNGLTTIRSFGQQERFFNMMKDNININLRVFFYNFAVSRWIGIRVEFLSAIVVLMSALFSIFNDNPGLSALGVTTALGITFNLNWFMRQFGELESRINSVERVQSYISIPKEKETNEDEFIQTGFIWPSRGEIEFKNVEIRYRPNSIATLRNFSMKINAQERIGIIGRSGSGKSTIGMSLFRMIECSSGSILIDGDDISQIDLKRLRSSIGIVPQDPFIFSGSIRLNLDPFDQFTDNEIWEALSKVKLKKMVSTMPMKLESLVQGGDGLTIGNKQLLCLCRAILRNSKIVLFDEATNSIDFQTTRLIKQTIEENFKDCTILTIAHNIDTILDSDKIAIIDEGELIEFDTPLNLIKDSTSRFSKLIKLNNNQKNKLN", "length": 1436 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54VG9-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKSIIILSFILSIISFSNGTIVKCTSASCSSLNNNCVNHYCNPRAGCYGIDKCVRIDACHIVSCDLNNGSCINTKANCDDGDPCTDDFCHNGYGCFSLPNNKHPSVICQKNCNDNNPCTDDFCDFTNTCQHTLKNCEDNDFCTIDSCGPNGCVHTNISCDDNDPCTSDFCSIMYGCYHEQIECSIKVPCSTDIECNRYNLCETYTCDLISNICKYSTKFCNGFPCINNECMTGVIYN", "length": 237 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54WA9-1", "protein_name": "Short-chain dehydrogenase/reductase family protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MEIKKNIFFITGCSGIGFGGLMVKKLLSRGDYVAATSRNKNKLIQDIGSNENDQFLPIEMNLADESNVKEAIEKCIEKFGRIDILISNAAMGILAPLEETTDKDARTLFDINFFGPLNLIRNSLPYLRNNQFLKNNNDNNNSKLNGPRIIIIDSICGYSSLFNGCSIYCSSKFALHAISETMSIELKPFNIHCCNIAPGYFQTSFLSSCLIPDTRIAEYKDTHSFLDEIVKLNGSRFLGDLSKAVDVIIEISLSYSPPNHVLVGSDAFELFDLKYKKLTNDILINKEICSNTDKN", "length": 295 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54WC3-1", "protein_name": "Cln5-like protein 2", "gene_name": "cln5lb", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MNKLIFIIICLGIVDKTISSDFKSYNDGIYSFTYDNICSFKNSIRDQDVYELYYVQAPLLYATYGNLLEKINAYHSGIVLYNKNNGPNITIDYYAIPSFEATLFPKSIIKDSQGNYNITWDTHGLIEVTNYINETYWNKRQLIMYDLSGIQIKQYLSWAPIYNKTHTFYNLFNIESDLSISNSSKIYKNSSTCDDFVWASFDVLYKLGGTIASVQSDPQRDDIKLFISSGEPKIVDYNDSIKRNQIASFFNELKDFANLGKNKTALEIFNELITFFNGYFYCYIDGEYYEMKLSKQNPISFTYLPSPIPIGKRNFNEIKKLGFCK", "length": 325 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54WW7-1", "protein_name": "Probable serine/threonine-protein kinase DDB_G0279405", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MGCIFTKPSPEQQKFDGEDYECENKKNLNLISYIRNLLFGNNSHQQLYNEIIPTTTSTTSTTTNSVYQNIGLDGYNNNNNNNNNNNNNNNIMNNYGYDDYGYSYEEDEDYYDEMPIPTIVAQPQPQPQPQPQPQPQPQQPIRIVSQNQQIPTTPPQQISQFNITGNKSPSSIGSRHRSKPKETLRAHKKRHKDGHKMVNEYVFVRKLGKGTFGKVKLAYHHDTHHLYAIKIFNKIRLKKQTMGIGRPNAFDDVLKEIAIMKKMNHINVVKLYEVINDPQEEYIYIVMEYIEGGSIMSANETSEDLARKYFRDIVFGLEYLHEQKVIHKDLKPENLLVNSEGVVKITDFGVSHIFDDDDVVRCSRGSPAFLAPELCRNESQPISGKGVDVWALGVSLYCLIFARTPFISKTNSLLDIYDQIVNHEPTYPREISNDLMDLFKRLLDKNPLTRIQIAEIKSHKWTTISGTWPMNELDHLILSVTDQEMIDAISTDHTIKPSDNTTTDEDDSDLSSSSGGESSGIIGSSNESKSMYNNVNSKQKIQNQNQNQNQNQNQNQNQNQNQNHNQNQNQNQNQNNNNNSLIEKSNISIPASSSSISNNDSCYENRNVYIKDEEMNMICNDSVIMDPIKELNKIDGLNYGCDFQIGKEYSDFQYNSGHFIYDLVDENESQISRESANDYYLPFKTNKYLNNKSIV", "length": 695 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54WX7-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MARTDNVQLPLENTSIEFEEEIIDSQNDISQQKNYQDFLKNIPTDLNERKEYISSLKKLIKLEKRNHQQIQGEQPNQQEGLNSDRPPPNHHGDHHHSLPPPNHHGDHHHHSQPPPNHHGDHHHHSPPPPHHHGGHHHCPPPHHGGHHHCPPPPPHHHGGHHHHCPPPPHHHGGHHHHCPPPPPPHHHSHHHHCPPPPPPHHHGGHHHHTPPHPPPHHHGGHHHHCPPSPHHHGGHHHHSPPPPPPHHHGGHHHHCPPPPHDGNEYLPQSQTNIEQCICRLNRKKELLIAKIQSIDSIIYNLECLNKQNYQNNYLPSIQLQPTQQPQQPQQTSIKPQQMCQQFFIPQTPNFPQMNNSAPLMYVSQIPVQQSFNNN", "length": 374 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54Y59-1", "protein_name": "Small GTPase", "gene_name": "rsmH", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MFNIFLSKSKDVYRVTSHKKEVKICVLGDANVGKTNFINQFTKSSFNEEYTPTIESRQNKLYKFNRKQFQIQIYDTAGSKELNLFVSDSISQCEGFIIVFSLNDRNSILKIQHYKTLIKNIFKDVEMPIVLVGTKMDLKKEITISKNECKITSVNNNIPNLFYTSAKNKESIIPVFKKLVDLIISKEKKVKKETESNNIKINNQNKIKKQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQHVFKTRSNSTLRMKKYLKLF", "length": 272 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54YJ4-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKKVYQDEEFSFFEIGGKKIADLYVRDIITEIRKRGKEITGLGLKSKYELLCILVNRMKEENPSLNIPPKKRVLDFGSLSSTTSNGILQDSNKFFKKDNTHQHQQQQQQQQQQQQQQQQQQQQQQQQHSNNSDDDDDTHNYNDDSDESDDEYIITEEEEIELHKNLNLGDDENLLTLEIKLLESQLENKKFRKSLLLKDKKIKHLENIIQQQQQQLLEQQHQQQQQQQQQQQQQQQQQQRQEEEQQKEQQQKEEQEQEQSSLKNNLKFKDGANLFSIESISNLYNKILNEFNFKKIITEFGDSSLKIHEEFVKFIILKSINLNHNNNKNNNKNNNNNNNNNNNNNNNNNNNNNNNNNNNSSNNLPNGDVNKNNNNNGEIIELVPPPKIDEFWKLMVLDTVGYQQFSNILGAKVNYDTDINPTRKGYQRLKDMKNLYFPPPPSTTELTTDEIWPNHYLLPIQPSPQKQHIQKQQLPSSSSSSSSSSSSSSSSQQHQQHQPQHKQQHQLQQIQEQQPQQQQHQQQQHQQPLQQQIQQQQQQQQQHQPQQQHQPQQQQQQQQPQQQQQQQQQQQQQQQQQQQQQQQQKKQQQQHQQQKNKENNKENNKENNKQNNKENNKLNDNNLNIEVHEDEGNRIINFLISPDTPLRNLFVAYAKEIGENFNSFKFYFGNELLCQNETPSQLLMRNGTKIQAFYLNKKEIKK", "length": 702 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54YV1-1", "protein_name": "Rho GTPase-activating protein gacII", "gene_name": "gacII", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MVRKLFNTSHKKELILDVDTTIVKIGTPKNVVLLTKWLDANGAIKEEGVFRVNGNTTTMEQIKKNFSQGKDDLTKYTSADIHSMAGCLKFILRELPEPIFTWDFYPIFIKIQCLQDESRKLFFLKMLIHGLPYTSRTLVFQLFGFLSKFSVHQDQNKMTPKNLATVFAPNVLRPKKEEDNFQLMNNQDSIGVIETLIEEFQYISNIQKNTLNSQEIKVKSVLPFDETTNAITQQSLVEDYLIAKANTPQESSSFKKNLPFKKGDIIKLLYIKNDGNFIGEINGITGNLSQTYVDIIDISELAEAFTLTPPPIPTLPIASTILHTPPTSSSSSSSSSSSSILLTDNQPKLCSSTPRINNSPSSFSPSLSSTTPQLLVQQSPRQSPRQIPSISLIVEPNNTNQPSFGHGTLQRTSTGYFSSKPLSISQPINMSKPTNMSPPTHHAMSMHNLPPSNTTRENHLPPLPTKPPPLTIPSSSSLPTTPIKQQPQQPIQQPLTPQNHHHHHHHNNLSSSVNTANTGNCANILSPNSDRYLSSRSQSSVHLSGSSSSSSSSSSSSSSSSSSSSSTSNRKFDFSLKSKSSKNSPSKNLPPQPTTTSTLTPPPPPTITTTTTTTTTTTTTTIATTPPPPSKPLPNIPVKDQQFNTLKRSTIEIPPPTITSTNINNNNNTINPRTLNYSFSSFSITYNNSQLGGQLSQEEPPGGVKSQSSYLDNNNLPSRNTNIPNLPPRPPPLNIPQQQQQYKPLPSPPQLQSPQSSLNQSLQIPLQQQQQVQQQKLTTHYILPPQNTNLSGKNLQRSSTSMLLNKLPPPPFSFNKN", "length": 817 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54ZA1-1", "protein_name": "Reverse transcriptase domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIKIMTWNCQGCSTIKSMNQTKNTINLIKPDISILTETNLKKDQNLAQIKNHYSTGGKGKEARGKGVMAINHLEQIEIKNLEEKEGRILKFTAILNNMEINIICIYAPASYDRRKGWFSNNISLEDLEQADIVTGDFNINKYAKIKFKDGSSDKRKFTENETIEFLMMEVGLTEILPNSTTKTTFKDKLIDRTFLSTKMHQLNHSYKIIDKINKSDHNIVVMDFKIPNFTKIYKSPLWKMNSIIIKEDKTIKKIEKIIDHYQETKRKNLNITEYWIKFKKKIKKQCITTEKKRILERKKTLSNLANEHTKTKNKYEKETISNEITILQEEERIDRMIKSSINYINNKEIASNLLTSILKKRDSGSQIHRIKNPSNGEIETEQKEITDCFRKYYETLFKEKECDQETHTELLSTWNPPIDKKKLTEMEDRIEEYEVKLAIEKIAEGKSPGEDGITSSFYKIHQHKLIPILTELFNFFLNNEIPTEFKNGILTSIYKGKGDVLEISNRRPITLLNVDYKIYSKIINNRILKILPNIISKYQNGFIPGRLLHNNIIALDLAMEKSDRNTIITFYDFEKAFDSISHKALIRTLNHLKFPRKITNTILSMLTNTNIRVMVNGQLSESFRAGRGTKQGDPISPTLFAIVCECLSTSIRKDNTIIGIKLNQNNSMKIGQYADDTVTLASNIDDADKMDMKVIKFCQATAAKINDNKCVCITKNPKIKTKYKTIGAKEEERYLGFFFNRKGVISKVDDTVNKLENLTKCYSSVSSTLKGRITILKSYLLSQLTFQLYINEINDIKKLENVNANMLFKGDRWAISKERSRRDYEIGGLELWNMATRSNAQKAWIYEQYLREKDDQNCPPHMEVWKSEKENSLSRIHIKCWKAWKLLHHPRERITLKLNQVKPKYENKQKLKVIYRNMMDIKYKGWNKHQPTTGQKLIQKNINHPILPFREARSITTIKGRDLAWRYLLKALPKHHGENCHSCKEEESSMHIFFECKSIKQNIDSIYQKVCKDSNNTYHGPWSEKVLGKLLTPFSSNLIGAIMESIWYRRNQIKFNDNTTIITENQIIHKIKKARDAEWDRTRKIVEKQLRQELRCTDNRESINRTASIKRRLEKFSHNWNSKLMTINIPEHFIPYCSYNTNYS", "length": 1144 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54ZA6-1", "protein_name": "Alpha/beta hydrolase fold-1 domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MEKINQTPKKHKIIEPNRKGYSIVGKNTGKPNKIYFETFGNGPKKILFITGFLSSSKGWCKQIDYFTNKKDQYEICVFDNRGIGKSNIDSKYSYNFSTKSMAMDAIDLLEDTLKWDKVHICGLSMGGMASIHLSSIIPEKVQSLVIACVPNGYFLPFFSMGVFNYIRAFFFTFNEKKKARIFQSLMYSDNYLDEKTNGSDETRSEQMFKKNSTGFKDDGPSFLTILGHQIGYITNRFSKKSLEVIKKYSIPTIVINSKKDSLVTIDITKKQIVNPLKPLNFHVIEGGHLSQLENPTFFNKLVENHVDKHSNWDHSTFFQVEKQQFQRQSFMTQNILYSKNYLSSNTLSSSFLNCNTLRSFFNKIKV", "length": 366 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54ZT3-1", "protein_name": "Reverse transcriptase domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIAKTQIKCTTIYAPAKSNERHEWYKENLTEEILHSDIITGDFNVDCSVDNNLNKYIKTIFDEFEFTEIKNGITFPRNKSTIDRVFVSKKILHLNPIVTTKEIKLKSDHNMVIIELKIPEYEQQKKGERLWRQNLETLKMNSTSLKINKTIKYYNKKFEENTSKWYKLNICEQWLKLKDEIKKLSINIEIRESNKTKNKLKELAEKLETAKDSRAIFLKEEINNILKEQVRIKQANQTNTHINNKETPSKYLTRRLKVQRKTNEIPQILDPSNNCLVTKNEDILEVARRYYENLYQKRECNEDTHHELLKTFNKRIDQKILDEINQPIEGYEIRLGIEKIQEGKAPGKDGLLPTFYKNHINEILPIISKLYNHFWNTTIPKDFKQGILITIYKNKGDPNNLDNYRPITLLNVDYKIYSKIINNRILKFLNKIISPFQTGFVPRRLLHDNIITLNSTIEIIKREINTKEDMEPIITFYDFEKAFDSISHNAILRTLAHLKLPLKMVLTIMNLLNESETSVYINNSLSKSFTSKRGTKQGDPISPTIFALVVECMATTIINDRCINGVTKETIKILQFADDTATIAYNFMDHFLMNEWIKKFCQATSAKINQTKCSCITFKWNTRTLYTVIKSNERYLGFDFNNKGIKSKINTISDNIRAKLVTWNSTSSTYMGRLIMAKTYALSQLTFHTYINTTPQHNSIENNIVKFVFNTKSKNSLSLQRRQNNYINGGLNLWNLKTRELAQKAWLFERYLHQRVSNTPSSYIKLWEEELKNNNNNKTTTKQNQLQLHWQCKQAWTQLKTPQNKQTHYEHLPKLKKIYEDMMTTQSPEHNKFIPTPGQKEIMTKINSKHLPFKEIKKIINMKGRDLLWRYTLKALPKIYNMPCQQCGEDETSEHIFFNCKAHIKNTQEIFNYTLTKSGHTTHTWNVKILNHLQIALVANLIAIIFDKIWHKRNKLIHDEKEIIIHRQQVIRELIKTQRAAWDRTQAVINKTLRIKSKQRPEEQNKLDSLISLKLLQFSRQWNSPLHAIELPKHLKKYNNSLSTFYK", "length": 1047 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q551H6-1", "protein_name": "t-SNARE coiled-coil homology domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MATRDITSSYILSRTECKNRAKIINSAININIKKSGSGYKRLEEENYQDIDIDNNNNNNNINNNNINNNDNDNDTTNNIKNSNNNNDIQLNILDTEINIEQLNSLPPWILKLNDIDENIKKIISLIEKFKKYLKEDIDKILAEDIEMESRIDCERSIELLTMETIRLFHKTFDMIKYLNKSNNSSQGENKMKKNTQRMKSAKLKALLITFKHIQRSYLALLKKVSSLQRSLSSSFLYRSGEYDVNNDNEDYGENSSISNSHYLQHHHNNNHHHEDDHDHEEDHEEIMDELNEMATTLIERQRVSQLIKETSHLIQDVGSMCVKKDSIFDRIDYNLAEGEELEFNGTILICDGITNGYERPENEKRKKLLLIFAVLIIVILFIFILKYVIEI", "length": 391 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q551V5-1", "protein_name": "EGF-like domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKYLFRFFIFLFCITRINSQTGCFFRETGADYNIDSVFSVFYVDNLFNIFGMTFYMKTCTYVTCDPWRQTMICGNYNSTTFQLGPYQSQKVTLNKNGISIEYLSDKTPPNHPCPTITTTVKFICDKSVLSVPKSDYDYVGTCGVQIKLFAIDYCQTCSKCIASHGSCNSTSGWCTCDSYTMGLNCDQLKASISSVVAPTIDGGSVIISGDFSSIYSLGPSLVITIGSLVCSQVSFAASTTQISCTIGAGQGYQNLTISDGSGSTLQYKQFYYHYPCQEDCTPYGTCNDVIGKCTCNYKYSIGADCKTLNLQLTSVKPTLLDGGQAYLVGDFSNVTGLTLSVKIGIKECTDVNFNETTLQCTIGSGEGIKDIIITSDLLTYSKIGAYEYQYYTCPLGCLHGTCNKYNGLCVCNNGTYGDQCQYIECPLDCSTPNGVCDKDTGICDCDDKYSGEGCDFIKCPLDCSTPNGVCDGKTGICNCDEKHSGDSCQFLQCPLNCSNPNGICNRNTGICSCDSKYSGEGCDFIKCPTDCSTPNGTCDGKTGTCKCNNPYTGENCDEIAKCKQECSLKHGTCDSHTLDCICDTQTKGLSCEESRLLIESADPTSLDGGTTTITGYFGTTTSLLSIKIGDSQCTNIKVESDTKLKCDIGPGEGTHNVTVTDDDLSFTGVGMFQYVGQINKISKISGGAIAGIAAGCVVGVSVLGAGGYYQYRKNKKIELFMS", "length": 722 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q554Y8-1", "protein_name": "ADP-ribosylation factor-related", "gene_name": "arrB", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MGMGFSFIEKKDFKRFLILGIDNSGKKKIMYRLKFNKDIPTRPEKGFFVETFERRFKYNNEDVCGQNMIRPLWPNYYTDETNGLIFVVDSSDQERIEEVRLEIKKLDENIKIFKNHPFLIFANKQDLKNSLSIEQLIDKLELNKLSLNRKWHIQSSNAITGDGLEFGLNWLFSSSHNFT", "length": 179 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q555E8-1", "protein_name": "Putative fatty acid elongase DDB_G0274669", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "METVQSIITEWTDPKSWEKLVQHSFKDSNWKELIDPVNYKFNFGVTPFSQFQIIPIVLVIYLVTIFSIKFLMKNRKPFSLKFISILHNAILCIWSLIMCVGVLYEIIKRVSNEGPLFTVCEDPNGGFDKGVTYYWSYIFYISKFYELLDTVIIVLKKKPLIFLHVYHHCKTVWWKKYITMIQILQFVCLGIAGVLHVYTINTIGCFTHYPAFAAAYSINFSFLFLFSKFFVKSYTPKNSNSNTNIKSKKID", "length": 251 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q555Q5-1", "protein_name": "Reverse transcriptase domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MRSIRIKKINFHIKQGEEQLKQELNNYCEETSLKYISARIKKRHNDFTINAVKDAQGRTINKQELIEEEYVKYYSNLYDYKEDDAPSHYEMLENWTVTRDSTWDNLENEFTTQEILEVIKQLNPHKSPGPDGIPNLFYITHKEKLAPILASAFNDTLRNPHLISKNYKEGLIITIPKKGDPELIKNRRPITLANCIYKIHSKLINNRIIPILTKVINHNQKGFVPGRFIIDNIISMNELINYCNDKRINGIITLYDFEKAFDSISHGSILRSLQHINIPTNIINLIMNLLTKSEARIEINGRTTIPFEIKRGVKQGDPLSPTLFVLVIEALARKILQDDRITGLPLNNSDHREKFQSFADDSASMVPDSQQLELVLQHFNSFCKATSSKLNIDKSSSILIGNPDNTNQRIPISTNPERYLGYFFTGKGITRKIPEILNTIRSSLVLWKTTDSTIKTKTNILKAFALSKLTYYSYVENFKEEELNQINKLVEWFLSAPNTKMLVDFKITPKLSPTAKKDQEVNADYANHRFHKEYFEWNYKAIDYDLTRSFAYRNLMALILHNIWIWICNQIYSEDPLTDESLSYSSLLKKWHKLATLEYIKKAKDLKNLSAKDHNNFKDPKILLTSTIKLRKTTANYYCIPESSLPNIISFDQFI", "length": 655 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q556H5-1", "protein_name": "Cofilin-3", "gene_name": "cofD-2", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MTTPKPTIAKISPECQTHFQDIKFRNKYQGILLKVNEESNMVVDKTLVAEGEFSELAQSLPTDQCRIIIYRYKSGEGSKLFFIYWGPDSAPQQDKLIYGNAKVTLAITLKGIDHKISASNLKEISEQVFIDRITPKTA", "length": 138 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q556J5-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MWNHNLCHAINLDRQFDHINNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNKNNNNNSYDYSFSVHSSQQYSRHYPNSCNNEQTKPKDYYDHASRSQHDYHANGSNNGNNNNNNNNNNNNNNNNNNNSNNNNNNNNNNNNNNCDSNYNSNNNNSNNISIANIKYQQDQHYQHSDTYTSHQYNSFNDNNNNNNNNNNNNNNNNNINNDNDNNGYNQYDESEEDEEEQDDYDEFDIQDSASSYNDNCGVLNSNTYIYDYQSPQQPLYSNEYQNNNHQPQQTDSYNYNNTNNDNNSYNINNNNNNNSYNNNNNYNNSNNNNNIGNIDSNTNNNNYNYNYSNNGDVYNGYNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNMNNMNNMNNNIITSNREQFYSNNNHNNINQYQYQSQQQQTQQQQQQTQQQQQQTQQQQQTQQQQTQQQQQYLTQYYQQELYSQSYKCRPYYQNSFVISKC", "length": 480 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q556P1-1", "protein_name": "CWH43-like N-terminal domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MISSSLKPSVLLWILAILIPSTLITTYTLTVLLFHGIRRTVPYISDTIDFSPESCIGTFFISISAFLVFIVVFVKHFLLQNNINQNFNIDIILNENENEKKKNRAKMLNRISTFLGLICGVCIHGVSSFQYHNTGLVHSIFAASFFFTGFIYIFTQTYLDHKFSKLPKRILILRRVISLTTSVFIGYIILQFFIDNLAPILKIISALSIFFYLISFFYEFSKITINFQINTISQIEHQKEYNENSALLISQ", "length": 251 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q556R5-1", "protein_name": "Reverse transcriptase domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MFNFERIDHGSGKGTGIAIENRDTRKGHISINFKDDDGRILSIKYNSFNSINILLINAPATISERNTFIINSKSLFKKYNSINHQIIAGDFNNNHDCNSFFGTELRKIIDQDMLLDTGIEENTPTFPRSMKRLDRIYCHPTLLNQNSKLVVHNTVFNKSDHFPITITIQTNRETTTTTTTTKLERLPWTLCKEILNNKHIHDGLSELISKNKDKIKSVEEWTKFKNNVIRDYLKKEQNKIKKEKNKRKYVIHKLLGNSDIIPKMRKELNEEISRILEEERKVKAWDIKLKLHLHQETPSKYLTSILKSRAKDKSIFQIKDKDNKTISDKENIAKRFVEFYQDQYEEKEDNEETHKKLLEKWEVDVDLIKKLEIDRPIRIHEVTKAIKTSSIHKSPGLDGINALFYKYHINSIARILTIAFNDLLTNKKEIPTKFKEGVITTIFKKGDELNISNRRPITLLNTDYKILSKILNSRLLDITSKIINKFQNGFVPNRFIQDNIQIMKEVIEISNKRKNNTLITFYDFNKAFDSISHKSITRTLEHIGIPPKFTAILLNLLKDTKNKIKINDFLVNGITIRTGTKQGDPISPTIFALVLEPLLIDIINDNTIKGFTLPNSKSLKLTAFADDIATFTNSTEELMKINTKIQKYCSATSSSLNKEKTVMIAIGDKPHDLPFQESTVPERYLGLNFTKTGLNSKYNTLIQEMKNNLIKWKSQAITMKAKMTILKTYVLSKLTYHQYMDNLNEEQIEEINNMTRWFLFSSVKNTYTEERKYKTMMKIDRAYADWKEGGIKLWDIELRHIAFKIWYMNRLLHNNYNNNNNTLQEWYMEQLSRKKPTLQPSTICADTGVYSESNFTKTIQR", "length": 861 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q556X2-1", "protein_name": "Reverse transcriptase domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIAKTQIKCTTIYAPAKSNERHEWYKENLTEEILHSDIITGDFNVDCSVDNNLNKYIKTIFDEFEFTEIKNGITFPRNKSTIDRVFVSKKILHLNPIVTTKEIKLKSDHNMVIIELKIPEYEQQKKGERLWRQNLETLKMNSTSLKINKTIKYYNKKFEENTSKWYKLNICEQWLKLKDEIKKLSINIEIRESNKTKNKLKELAEKLETAKDSRAIFLKEEINNILKEQVRIKQANQTNTHINNKETPSKYLTRRLKVQRKTNEIPQILDPSNNCLVTKHEDILEVARRYYENLYQKRECNEDTHHELLKTFNKRIDQKILDEINQPIEGYEIRLGIEKIQEGKAPGKDGLLPTFYKNHINEILPIISKLYNHFWNTTIPKDFKQGILITIYKNKGDPNNLDNYRPITLLNVDYKIYSKIINNRILKFLNKIISPFQTGFVPRRLLHDNIITLNSTIEIIKREINTKEDMEPIITFYDFEKAFDSISHNAILRTLAHLKLPLKMVLTIMNLLNESETSVYINNSLSKSFTSKRGTKQGDPISPTIFALVVECMATTIINDRCINGVTKETIKILQFADDTATIAYNFMDHFLMNEWIKKFCQATSAKINQTKCSCITFKWNTRTLYTVIKSNERYLGFDFNNKGIKSKINTISDNIRAKLVTWNSTSSTYMGRLIMAKTYALSQLTFHTYINTTPQHNSIENNIVKFVFNTKSKNSLSLQRRQNNYINGGLNLWNLKTRELAQKAWLFERYLHQRVSNTPSSYIKLWEEELKNNNNNKTTTKQNQLQLHWQCKQAWTQLKTPQNKQTHYEHLPKLKKIYEDMMTTQSPEHNKFIPTPGQKEIMTKINSKHLPFKEIKKIINMKGRDLLWRYTLKALPKIYNMPCQQCGEDETSEHIFFNCKAHIKNTQEIFNYTLTKCGHTTHTWNVKILNHLQIALVANLIAIIFDKIWHKRNKLIHDEKEIIIHRQQVIRELIKTQRAAWDRTQAVINKTLRIKSKQRPEEQNKLDSLISLKLLQFSRQWNSPLHAIELPKHLKKYNNSLSTFYK", "length": 1047 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q557C9-1", "protein_name": "Homeobox protein 5", "gene_name": "hbx5-2", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "METIVNNQNNGQQNTVPTQSFSSSVYMNYDFFDSQQLQQPQHQPQHYQQQDSFVSPNLDNNNPQIHVQSNNYNQNGFVGYNNSNNNNNNNQHMNNQYSNSFHNNNSSGFMAFQNNSSNFNNQNNNNSNNNNNNNNINSYDYNNSNNNNYNNNNNTHSNNSNNNNNNNNSNYWNNNNNNNNNNNNNNNNNNNNNNNNNNNNNSNNNNNNNNNNNHHHHHHQQQSQPTSPYNNPIQHNPNDMKFNGQHNPFNGNQMVMDNNNNNNNNNNSNVFNSNSNSNVFNSNSGSFLQINNNNGSFSSYNNNNNNNNNNNSNSNNNNNNNNNNNNNNNNNNNNNNNNNNNNNSNNNNNNQFSQSYDSTLGNNRFSSMMGQPIQQQQSPPQQQQQQSFIQSSPQAIPASNCNGNGSTSSSTSPLSPTLIGSAPGTPTSMLATTLFGFNLSSSPTSSPSSPVKKGKSQSALALSSSGGSGGSSGRKKPQKHDSMSSITNTNLKSTQASTLKESKRSNSSPNLKKQMQLQQLQQQQKLNENGTLIPPLPFASISENITNNNNNNNNNNNNNNNNNNNNNITNNPLSGSMEFPNSNNINQSSDSINGEFNIGQPESPKMYNSSPSPPPNATSTTKGGKKSKKSLHISTTQQSPSLNGSTGGSMLTPTMSGLSLSGGGSGGGFSPLISPTGTTSNKDLQSSPSPSPLLKSMSMGKLDLQDSIDSMSSPLSPNSSLSSSNGLLPPPPNSNNMNSSGGIPTPSTPTSPPPLTHHINIFSNLEFVKQLKDHLLPNDFKPEEHALERNLLRFQQFVKTLAEPLQRDVVTSMFELSVDAQLQYGSNLDNDNLSALMLFRRKILNFNLFRMMMLNDPNSFIPLPSPFPIQTTTISSNGTIVNPTNVNNNNINNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTSANTVQSGTTSNSNLVFQQTSNSNTLSPSQQQQQQTQQQQSINGSSTGSLSDAQYQDLGIHLDTSSANSGCGINVSIGSSIGGGGGGSSLNGSNLNGSSSISGSISGGSSNGGGQFIMSPQFSLDGAYQQQQPSSYNINNEMELAEKDEDEIFNNNNKDNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNSSSINSNINNVNNCNINNNSNSNNGSINSPRPSTPTTLNSSGKRSKKIYRGDSFGAGNDISTGLMASSDQIIPPPQQQQHQQLVNNNNNNMNNSENNILLADSNKGLSVSLGSLPTNTPSSMEIEQQQQQQQQQQQQQQQQHLNQQQILHQQLHHHLSSSLGGAQFTNIQQQQQQQSGNIFYNSPYNSSQVYMNPYGTSITNTSLAGPSTTSSAMQHMITNMTSSNIIVNNQNNNNNDQNNNNNNNNNNNSTTNSNVNNNNNTTNTPSSPPQPNNCTPTQTSIITSNGVVVPSLQMRGTITNPPPVLPTPDTLVLQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQETPHTPTSNSISSPRSSPVHQQSPSNTNTTTTSTTTIRHSAVTQLSFAGLHNQQVSPISPRSPRSPHGTSGDYNDGSQSPSSRRKNRFTDFQIKRMNDCFENLDKNNNGKFTSEEICQIATELGLTDQQVRVFFQNKRARSRPSPRGQPTNPLTSSTNNGNNSNLALQHLQQQHLQQVQQQQQQLLQLQQQQQQQQQQLHQQSANTTPQLNSMNPNSINYNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNIINNNITTINE", "length": 1723 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q557D0-1", "protein_name": "RING-type domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MTGSNNLNSLNNNNNNKISLQETIQDIIKCSICLNSPKNPRFCPRCSALFCLECIDRWIISNPTCPACRDTLTSDNLNSNLIVSNILNELVKSEQEEYTSSDICNYHGYERLYYCSTCQEPICSDCALFKHKDHKIEKLSINFNKNLEILKIEEEALKKRQEELIELNSFLELDAETLLKNKSQIEKEISKVVITMKARLKYDFERRYNTILESQEKINNELTHLDFIYNDLLNHYKKSPSSFVLTSQQFIGVLQSVHKNSIMDIYTPINTDLTSELIPPFENRLLKFENFTTGDCLFSSRIAFYGMTWEIKCGIEEDNCFLNLKVLECNSDGKYFYMFTIVNQKTNVNKLIEFDLPFQAGETFYIPNFSSKQTLIDEGFILPENDILLLQFSFRPQNYFCYSNDLKRYIDILEYRHRGYFGEEDEDDGTIETTVTKLPNDKSTILGSDNYNDNYNDDGIGDLDEDEEEEEDDEDDDDNLDDHLQYDNDDDEDEEEDDEEQNEEDNDEEGTNIPTSEYEDLDTSSASVISNINRRDRFKNNNINNNNQFVNSNNNNNKYNTTNSNNSIVGSSRYINNNNNNNNNNNNNNNNNNNNNNNNNNNNNYILNRSYSTNKIYNFYQDEEEEEEDDDSNIDDQDEDEEEEDSEEESSLSSSDLQDLDSSGDQSSLEFSFSKYTNNYYSNNNNNYNSGGGGGVGGAGDNNKIECIRRDFNNLLKRINFTNSQLTNLKPGVPKDGDLLNDDENDKKCNIPLNEDEEEDEDEEDDVNKNKTTSTTTTTTTATTTNEVVTINPNTISNNSQDEEEVKSDIVKLLENGIANMLNNSNSSNRSSNNLKQQQQQQQQLQKDDQKQKDEQQNKSNTGCDIDQLNILSKLSIKESCDSIKNNDNDSLGNSTNNNNNNNLNNNNNNNNNNNNNNNNNNNNNNSNNNNLQSFLQSNENTENETDFNDNNTNPETNTETENEYLTSSNMNLDGGESEFDSNKSYEGSSTDENFNSDEDYQDEDNFNQDATGSESANNDDYLDDNEREGSDSIENYDEDIEKVLTSHNIITTPSIPPSQQPQPQLQTQPQTQPQSQPQSQPQLQPQSQPQPQTQPQLQPQLQPQLQPQLQPQLQPQLQPQLQPQTQPQQQKKYDDLSENQIQTENRNKKIKEEINNKTNNDNNNELGKSSKSNTSSSSSSSSSSSSSYSESESSESDSNNEYDNEDEDDIVNQVSNFNFNFNDASNFKNFSFRPKFPSDENDNDDNDDDYEINIDLKNIQKISPILRAIENGESNINHYQSPVSLSSSSSVSSFSGSGNSVPITATTTTTTTTTTTTTTTTDDDSGINMPISPLSASPPSPPPQNEPQINNETNDNDVKLPQI", "length": 1364 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q559A9-1", "protein_name": "Probable polyketide synthase 13", "gene_name": "pks13", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MENFKYRNNENDVAIIGIGFRLPGCKNFTPNELWNNLKNGFNGVVELSNRWSDNFYTMGKVSSAYAGLLPFDELKSFDPLFFGINPTEVPTIDPQQRILLKCTWEAFEDAGIDPIKIRGSNTSVFIGTSTNDYQRIIREKDQTITNAFGTSLHATSNRISYCFDFRGPSMTLDTACSSSLNCVKLGYQSIRDGTSNLSIAGGVNLIIDPYFTASISDLNILSKTGSCKTFDASADGFARAEGSGIIVMKNLKQAMIDGDKIYCVIKGASSNVDGGGLQDKSNFYAPSSLSQCNNIKMALKSTNGTVEPKDISYFECHGTGTPTGDPIETRGISMVFNDESRSKENPLLIGSIKSNIGHLEAGSGIASLIKCCLMFKNKCFAPNINFKVPNPKIKFEEWNLKVVTEPIQFTKSNTCIGLSNFGVTGSNCCLILSQFNNNNNDNQIVGNNNNIKSNKEYLIPFSSNSVKSLENYQQLLIKNGENEFKFLEFIKHQIFTKPTSLYQRSVVIASSWDQFNNAKIMKTSNSKSSNISIERNNPITVFVFCGQGSQYDRMGLELYNNDFIFKESMDLLDNKLSKYYGYSVLEKLRNCDSKSIQHPMIAQPVMCMFNISLFELYKHWGIEVSFIIGHSLGEIPAAYCSGMINIDTLCYLIYHRSIAQTKTHTNGRMLSINISADEYFSQYSKQYPDIEIACFNSPTSIVIAGNEQKLNEISEILKEKGIFSAMLASLSSFHTSSQNKVKEDIVNKQFDSKQSEIPIFSTVTTNLFDSVTSPFNSSYVFNNIVSPVKFSQTISNLYKHIESNQLGNDIVFIELAPHPTLQFYLKQMIPKPTNDDNSIEFKVSVYSALNKKNNDIEEIQRTISQLYCDNGYNVNFKCQFQHDDTHGSINSNINQLSNISLPHYQWDDEKYWKEDPSISKLIVNGPQTDNLGYLNENSPNSKSYETFIDIKRPPFQYLKGHMVKGKYYFPGCGYIDNLLKIYKSQDLTINQMGFKSPLIFIEGVNQALQTNIFKKSTSNTTTNNNDEFRVEYHFNDQKTNRWILSSFGDFQLSNHSSNSDNLEKINIKQLIQNQCNLTKLSRDELYSHIKSKTGLTYNGVFQGVNKCYLGENCSLSEVSLELKREPSSFFNTAVLDTCLHGMLCLLEEQSQLVFDRIEGFKYHSSNVPTSEEEMKIHSNIYVYSTINPSRIGDSYSASIVIMMEDGTVLIEIENAVCTSLTPIKESISVKYPTNQLFSMYLQSKDSPIPSPLNFKSLYNQNQQQLKIDKQFTDWMQKCEKFISNQFFKNIEKRNPEINLEILNSKTIIELKSKYCQNLKNERLFQFVFETIKQLGVNAYDDDDDLTIDSSEDRKSIYEILIKSTKVIPKLLFPLEDEDLTIDSPQSLFENGLLDRFYNNPNLMTNQCQLIAQIIKESLKPLLNKKMVFRILEMGGGTCSLSVVVLNLINQLLLENPSFEIDIEYTWSDISPSFISAAKEKLSHIDKRINILYRSIDIEQPFIEKQDLSPSYYDFVIMSNVLHVVKKLSPSLDEIHKILTPNGHLLFVEIPYKELISDSIFGAFNQWWAFEDTDIRKDRCSIPPNQWIQVLSNHNYKDTIVSDNKECTWCCFVIHSQKPSLLELSKKIECNQYDNIIVFGNENSQDNFTKSIKLSYNNNIIKWVSNIVEIKKFIKLNIITNNSIIYFTKGIEELTIDNFKLINFQYIQINQLLLKYESKCKNVLVTRDCDGSNYLASSLIGAARYFDEYRQLELFTLDFDNDTIQSCDECSSSSCSNLIKLIEPLIDPKINIQREFLIRNNRVYFERAKLETNLKKSFKSESFENSNKLISTLNFNLDYQLQSKPFKQLLQNEIEVEIKATGINYRDYLVFTGSLPIEKTNHNGISNQPEFGVDFSGIVTKVGGGGGNGEFKVGDRVYGIGHNTTSSHITIDSRYASLIPNSLDYIEASSITSSYILSLYGIFDIGNLDIQDNESILIHSGTGGIGLSALNSLRWKGHKSHLFVTVSSKEKEQYLRDNYGSFITGIYSNKDKNYPKLIKEKLNQLGSNKQGVDLILSSLPNGDDNLNFKCLAKNGRIIDLSNNIDLFNISKSKIKKLLNTINDGFESGELQVIPIIEFSNSNIRDAIEFINERQHIGKIVISHDDSNLLIDLINKHSNQPNYSILKSDYQISQSNLGKNILITGQSGIVLEILKWIIKFSNSIENVIILSKSLMKWELELLIGKTMKKANNKIKFHFKSVDVSDSIQVENSINQILNDNPNIVNIDSIFHFAFTQITKKVEEIDMESLNVSHNAKTIGAINLHNQSINRNWRLNNFVMASSATSIIGSTDQCSYVCANTVLDSLSKYRKSIGLPSICTNYGAIESAGFVSKNESVAAMFNGIGIISISTDLILGTLDLQIQNQQSSTNLMLSDFNFLNFVNNNLQLSLISKFDFQTNLAKNQVNEKLQNQTQNQNLQIQSPSSTTDCQTIIKDSFLHKISEVLSIDISKLNLDLKLLDYGADSLAIVQIKNWIDMEVSPNLIVIQQLQTFTITSSIQYTINSFLKKKVQSQE", "length": 2551 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q559I8-1", "protein_name": "Uncharacterized protein DDB_G0272530", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKIKLILVLIVFLTIVNVNNSIDLCLSNPKKALVNQACKYSTDCEYPLFCGSGNGYGKNATCSKNIETGGSCESNNQCTPCNVCFNAKCKVKLYLGDACDENKSYCSSSVCIKGKCSIQGDVCTANNQCKFNNYCKSGKCVPLEKEGSSCDKDSSCSLTNACVGGKCVTKYQKPLGAVCNSSNECQVFSGHVCGANGKCSVYNQLLSKCKENSDCGPNGMCMCKSETENVCVDLSVGALKNDKCPSLLSSFSSCMTRERCTENTPTGCPKCYPIFMCYQYSCFYMNQFIRSTQNYYKSFCS", "length": 301 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q559Z2-1", "protein_name": "E2F/DP family winged-helix DNA-binding domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MNISLLLNNRNRNRNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNSNNGNANESASLNNGSEEIRSNPSSNFSSPIQSSLSSSSSSLSSNQATTPKKRSHAHKNSLKCQSPQMSPQMSPQMSPQMSPPLQYFPQHQMQHLSQYQLDHLQQQQQLIQQEQQEKQQQQQQHQHQQQQQEQQKQQQKQQQRLSPQPRSSQPRSSPPRSSPQRSPQLNQQEGHINSVQTYSGNNINDKNQNNTNNNNNNMSNNNNFHDDNNCNVNYNNIRNNSNNNNNNNTNNNNNNNNNNNNNNNNNNNNINNNNNNNNNSNNNNWNNNYCNNSFADETNKNNTYGMEYINISEENQYNNNNNNNNSNNNNNYNNYNNYNNNNNNNNNNNNSNNSNSNNNNNNNNNNNNNNNNNRNNIINSNINNSNNNNYNDNGYNNNSNINSNDSYNNNNNNNNNFNNNNFNNNNNNNNNNNNNNNNNNNNNKNNNNSNSYNNNNNNYNNNNNNFHNNNNNSAHNNNNNNYNNNNNNNYYNSNNNNNFHNNNNNNNNNGNNFNNNNNNNGNNGNMFTNVNSIDNVNRNNYNNYNGNNNYNGNNSNNNNNSNNEVSQITTTSLPVKKTKVFKAPREKKFKRGPDQDIREIKPATALLKQYFIGNSITEFNAERVGSILKINHEKLKDILDIMECASLVINNHSNNYVWLGLDNPGFLKLVFNVFHCSSNLVTKEPEFACLKCKENAYRCPTSVDLPKDTRLGSTVCQFMKLLLSKRIRTNPVNDFLTIYQVCFNFNFCSEGRCPEEDFKYLRNTAKVKRCYDVANVFNGLNILEKVGKSKIHSYQWCGDFTIQDCENGCPFGHPLLTPGTAYTTNPSPNPFNQFSNAYISSSAQSSLSNSPFIQGGFHGNNNNSNNNNINGNNINGNNNYGYNNNNNYNNYNSNNSNGFNNGNSFFQQQQPLVNSGVSMVRNNNYSYSP", "length": 964 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55A39-1", "protein_name": "Transcription initiation factor TFIID subunit", "gene_name": "taf9", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MSSNETLPNSEQENNSKTDTKNDNKNIGDENKIIDTDKDMKDNDTINGKENGNININSNNNNNNNIDTDKEMKETSSIEEDDNNNNKNQNNNNNNNIKEENDNLTELKNNNNKENKENKEETIKEDKEKENNKEPVKNKEETNNINNNNNKNNNSDNINNNNNNNSKETLNKISSMSKVSLTSESSEINGQVNTGVVNNNTNIDITQTNLDEPRDSRVIKSILKTMGIQAHEPRVVNQLLEFMYKYVFEVLQDAMIYGEHSGKTDIDVSDVRLSIQSRVNYQISTPPPRELLLSIAEEKNKTPLPPIPNRYGVFLPPDEYCLTNPNYQANPTKPVFQPVQPLVGNTSRGNYNKKQSDKQVSIKFNSMSNNSTTTTTTTPPTIGSQNGTTIVSPPNLGSLGTTTTTTTTTITPPPPILPLSSNIKPPTLSIPSSITSPPTVTTKNTSTPIIGLGSTTVAPPKTSSSSSTIAPPVLSLPTSITSPPTVTASSTTTTTTAPTTTSPTIPSLSSPTTAATTITVKKEDVKMDDFDDFDGQMKDDITPSSTPQQPSQPTESETTTTATATTTPAVTTTTIPPTTTSTTPPTTATTSTTPPPSTTTTSTPPTTSTTPPPQIKEEK", "length": 619 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55B17-1", "protein_name": "Amine oxidase domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MYKKILLIFALFILVNINFASSEFKKNETESANLKSLYASYLMKNNNNTKYNNNDNSNNTNIYNDSVTKNKSKNKNELTVGIIGGGIAGLYAGMLFIKSMIFDDLGIDYTILEANKERVGGRVYTHKFDDHKYSYTDLGAMRIPLTPLMDRIVSNQNYSLFSKLAKGGYQIPTVPFLISVNNEISYYNGIRVLKGSPVLNPSDPFNYSDSNNGGPGKGIPDEYANRTVDSLILPVFYQFINNLTVDFYNGFKQMLKYDSYSARDYLKTFHNYPNSVIEYIENLSTISGRLDQTSITELLMSVFDFSGEKFVCVEGGTGLIVKSMSQIIKKKVEMGSFVTKISKSFDKKNNEIDGLNVEVVRDSNFGGSDTEILKFKHVISTTTLPALQRIDTSDLKLPLKLKVAIRSLKYTGAIKLAINFKYRWWEDSEFMSGKPIRGGSSNTDLLLRQVVYPSYGINNGTKGVSGVLLASYSGGLESIRISSMIGKKDKERKLLNIVLRDLAEIHNVDLKKLKNLYKDHFFQSWDNDEFSSGAFALFSTSQYTELFPSTGQSHVDGRFHLSGELTSVHHAWMIGGLNSAYRSVDLILKNEGFEDLRIKLRNNWGTIEQAEYPSLDWYKYDSDINHYKLY", "length": 630 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55BT6-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKLLYIVVFLLFAIKLCCSEYCGETYCVENRNCYSFIGCRNSTCLYETIDLDDEVDCTVDTCSDRYGVKNTPNNSLCPPENLCDMFLCDTQSGCVAIPKVNCPAPNPCQIPLGCNRETGICEYDEIDCHDDNECTNDYCDPILGECVHFSNDTICSNKASNFSTCVLSGVCGEFGCKYVEDNCNDGNPCTDDYCDFKNGCVSQKNDWNCDSLSACSEGICTDNGCVQQEVDCDDDNPCSEDFCHPLFGCGSILNDTICTNGNKCVNSTCTEDGCSLPVPIVCQDGNPCSDDTCNPSTGCQFTLNNSNCNDGKKCTIDQCGLNGCTHTNITCPPKRVVDIILIGLICRNHYCDQSTGNCVPDMNSVSLLCI", "length": 370 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55C69-1", "protein_name": "Chromo domain-containing protein", "gene_name": "hcpC", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MGKTNKKKIEEESEEEEAGDVFEVEKILDKRVQHGRIQYNIRWKGFSADYDTWEDEANVVGCPELVREFESSRIKEKKKNRKRKNVIIDEDPTEEISSSLSSILSSPQPQPPPPLQLTNHSPASSELAITTNTFLISNCTSTSNKTKISIENEEIIKNDHARYGVPYVEGIGFENGDCVDEIVGCKPFGENNLLYFFIRWRGKEKLSWVSNESIKQKEPLQLIEFYESRLKFGYKGEEN", "length": 239 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55CH5-1", "protein_name": "Reverse transcriptase domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIAKTQIKCTTIYAPAKSNERHEWYKENLTEEILHSDIITGDFNVDCSVDNNLNKYIKTIFDEFEFTEIKNGITFPRNKSTIDRVFVSKKILHLNPIVTTKEIKLKSDHNMVIIELKIPEYEQQKKGERLWRQNLETLKMNSTSLKINKTIKYYNKKFEENTSKWYKLNICEQWLKLKDEIKKLSINIEIRESNKTKNKLKELAEKLETAKDSRAIFLKEEINNILKEQVRIKQANQTNTHINNKETPSKYLTRRLKVQRKTNEIPQILDPSNNCLVTKHEDILEVARRYYENLYQKRECNEDTHHELLKTFNKRIDQKILDEINQPIEGYEIRLGIEKIQEGKAPGKDGLLPTFYKNHINEILPIISKLYNHFWNTTIPKDFKQGILITIYKNKGDPNNLDNYRPITLLNVDYKIYSKIINNRILKFLNKIISPFQTGFVPRRLLHDNIITLNSTIEIIKREINTKEDMEPIITFYDFEKAFDSISHNAILRTLAHLKLPLKMVLTIMNLLNESETSVYINNSLSKSFTSKRGTKQGDPISPTIFALVVECMATTIINDRCINGVTKETIKILQFADDTATIAYNFMDHFLMNEWIKKFCQATSAKINQTKCSCITFKWNTRTLYTVIKSNERYLGFDFNNKGIKSKINTISDNIRAKLVTWNSTSSTYMGRLIMAKTYALSQLTFHTYINTTPQHNSIENNIVKFVFNTKSKNSLSLQRRQNNYINGGLNLWNLKTRELAQKAWLFERYLHQRVSNTPSSYIKLWEEELKNNNNNKTTTKQNQLQLHWQCKQAWTQLKTPQNKQTHYEHLPKLKKIYEDMMTTQSPEHNKFIPTPGQKEIMTKINSKHLPFKEIKKIINMKGRDLLWRYTLKALPKIYNMPCQQCGEDETSEHIFFNCKAHIKNTQEIFNYTLTKCGHTTHTWNVKILNHLQIALVANLIAIIFDKIWHKRNKLIHDEKEIIIHRQQVIRELIKTQRAAWDRTQAVINKTLRIKSKQRPEEQNKLDSLISLKLLQFSRQWNSPLHAIELPKHLKKNNNSLSTFYK", "length": 1047 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55CH7-1", "protein_name": "SsDNA-binding transcriptional regulator", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIFKITRTKRRWTKNQKKILVMKVVEKKVVVKKSKTPNTSPSSSSSSSSSSSSSSSSSSTNDKSFNLSDKRKISYSNFKGLERIDIREFFEDKSGELKPSSKGISLTREQLVVILENGDTIKDWIKESK", "length": 129 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55CJ7-1", "protein_name": "diaminopimelate epimerase", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MEPSIDNKPSFRINFTKMHGAGNDFVVFEKNKVERLNGDKSTVTFEEIVGFTTKIAHRKLGIGFDQLIVIDDNPIDKNAAYGMDVINCDGNIEVMCGNGVRCFSKYIVDNKVLSKNLKEQLNFDGDDDIEQIIETKSGIVKTYPLLKHHLNNKDNDVIMVKVNMGTPKVSRFINEIDRHIPKVLTNQSPIESYMYTIDIGLPYCSKLECVYVTVGGNQCVVFIDRNIELGYLDSSYGDHTKFSTIDFKEISDIIQSNVNGFDDIPNVEFVIQSPQDKLENKVISRVVERGNGETLACGTGACGVAISSILKGYCNENTEITVEMPGGKLLIQWNPNNEIFKTGPATSVFKSQILI", "length": 355 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55CV8-1", "protein_name": "Lipocalin/cytosolic fatty-acid binding domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MELLVGGTILGALTYAYSSLKRTIPEGAHACSPFYPEKYVGKWYEIARLDFYYERDMNNVSAEYTLNKDGTISVINSGYNYVEKKRESVNGKALFVHGSDEAMLKVSFFGPFYAGYNVIAIDPDYKYALVAGRSLDYLWILSRETSIPDHIKKQYLELAESIGYNTSKLIWTEHDNINNKKD", "length": 182 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55D49-1", "protein_name": "Reverse transcriptase domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIKIMTWNCQGCSTIKSMNQTKNTINLIKPDISILTETNLKKDQNLAQIKNHYSTGGKGKEARGKGVMAINHLEQIEIKNLEEKEGRILKFTAILNNMEINIICIYAPASYDRRKGWFSNNISLEDLEQADIVTGDFNINKYAKIKFKDGSSDKRKFTENETIEFLMMEVGLTEILPNSTTKTTFKDKLIDRTFLSTKMHQLNHSYKIIDKINKSDHNIVVMDFKIPNFTKIYKSPLWKMNSIIIKEDKTIKKIEKIIDHYQETKRKNINITEYWIKFKKKIKKQCITTEKKRILERKKTLSNLANEHTKTKNKYEKETISNEITILQEEERIDRMIKSSINYINNKEIASNLLTSILKKRDSSSQIHRIKNPSNGEIETEQKEITDCFRKYYETLFKEKECDQETHTELLSTWNPPIDKKKLTEMEDRIEEYEVKLAIEKIAEGKSPGEDGITSSFYKIHQHKLIPILTELFNFFLNNEIPTEFKNGILTSIYKGKGDVLEISNRRPITLLNVDYKIYSKIINNRILKILPNIISKYQNGFIPGRLLHNNIIALDLAMEKSDRNTIITFYDFEKAFDSISHKALIRTLNHLKFPRKITNTILSMLTNTNIRVMVNGQLSESFRAGRGTKQGDPISPTLFAIVCECLSTSIRKDNTIIGIKLNQNNSMKIGQYADDTVTLASNIDDADKMDMKVIKFCQATAAKINDNKCVCITKNPKIKTKYKTIGAKEEERYLGFFFNRKGVISKVDDTVNKLENLTKCYSSVSSTLKGRITILKSYLLSQLTFQLYINEINDIKKLENVNANMLFKGDRWAISKERSRRDYEIGGLELWNMATRSNAQKAWIYEQYLREKDDQNCPPHMEVWKSEKENSLSRIHIKCWKAWKLLHHPRERITLKLNQVKPKYENKQKLKVIYRNMMDIKYKGWNKHQPTTGQKLIQKNINHPILPFREARSITTIKGRDLAWRYLLKALPKHHGENCHSCKEEESSMHIFFECKSIKQNIDSIYQKVCKDSNNTYHGPWSEKVLGKLLTPFSSNLIGAIMESIWYRRNQIKFNDNTTIITENQIIHKIKKARDAEWDRTRKIVEKQLRQELRCTDNRESINRTASIKRRLEKFSHNWNSKLMTINIPEHFIPYCSYNTNYS", "length": 1144 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55D57-1", "protein_name": "J domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIQVKNKIKIISILITLFILTINQVVECKSSLYYSILNDYEKGIDYYKILNVTKDSTYSEIKKSFRKLSLKHHPDRNVEKSSHSLYILLNQAHSVLTTDETRKEYDELLVNGIPWHENYYGKYAYRYTGISHDLRHVLLGLIIVITIGKFVYQYNKHHSMIKRAKQTDQYKKRLAQLDGDEDEIQLVIQGADKPTISSLFIIQLFFIFPFKILKSIYTFIFINKFKFIQKTDEEKEEEYRLKMGYTKEDWEYHKKKSIERMEKLKQSGKYKKYLRSKNK", "length": 279 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55E25-1", "protein_name": "DRBM domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MSNKSHTSEKVQLNEFLQKKKQPIPIYHTESKGSEHNKDFKSIVVVNGKQIESDWKKSKKESEKDCAKNILEFIETLDGYPIYFTPFSKDPPQNNKKIYDEKLQAVYNSVSSGIEGLNNNSFFTKIENNNNNSSSNNNNNLDHNHSNDSSHTSTDNNDNNSNNHNNNNNNQINIDLTMENVNISQSKTITNEGTLNNDNDNNNNSIQQQQHQPQPQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQCFDKDKTNLKKKKKIPFSYNTDLIEHIDLFKRQDFPQTYPSRTTYTDTGHTQQLQKQVFLLTEKIGLMELFYKKQIRVILKSHHNLETELSALKSFVEDCSVTPIEGLELYSIPVPLNPNAKPSAGTTPVLSKSETQNEIIQPTKPPTKPPASCLIKKKIPNVNMKATNKTTTTTSTSTSNSSTTIKTTDSFKNTTNNQHPNTLKPMVSKINQQTSDFIFPLPKPIIRRNPIGNGNLEKKIEKKNSKPNTIVLGVDTQSQSKTKITPSPTTPPPETTPTTPTTTATPTTPTTPTTPTTTATPPPTTTATPPPTTTATPPPTATTPPPTTATTTPPPPPIIATTKTTATATATTIPIDLNEIQIPIRSPQDLTVNQSMISTAMMIASAAQRNPKLTMKLKRKLEESPTLMSKLQKIQFEKEEEILCSQDLHSPIMSPQSPTHQPKTLEPLSPTKKSTQKSPPPTSPSPIVTRARASSNLLPIQNLISKK", "length": 733 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55E47-1", "protein_name": "Reverse transcriptase domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIAKTQIKCTTIYAPAKSNERHEWYKENLTEEILHSDIITGDFNVDCSVDNNLNKYIKTIFDEFEFTEIKNGITFPRNKSTIDRVFVSKKILHLNPIVTTKEIKLKSDHNMVIIELKIPEYEQQKKGERLWRQNLETLKMNSTSLKINKTIKYYNKKFEENTSKWYKLNICEQWLKLKDEIKKLSINIEIRESNKTKNKLKELAEKLETAKDSRAIFLKEEINNILKEQVRIKQANQTNTHINNKETPSKYLTRRLKVQRKTNEIPQILDPSNNCLVTKNEDILEVARRYYENLYQKRECNEDTHHELLKTFNKRIDQKILDEINQPIEEYEIRLGIEKIQEGKAPGKDGLLPTFYKNHINEILPIISKLYNHFWNTTIPKDFKQGILITIYKNKGDPNNLDNYRPITLLNVDYKIYSKIINNRILKFLNKIISPFQTGFVPRRLLHDNIITLNSTIEIIKREINTKEDMEPIITFYDFEKAFDSISHNAILRTLAHLKLPLKMVLTIMNLLNESETSVYINNSLSKSFTSKRGTKQGDPISPTIFALVVECMATTIINDRCINGVTKETIKILQFADDTATIAYNFMDHFLMNEWIKKFCQATSAKINQTKCSCITFKWNTRTLYTVIKSNERYLGFDFNNKGIKSKINTISDNIRAKLVTWNSTSSTYMGRLIMAKTYALSQLTFHTYINTTPQHNSIENNIVKFVFNTKSKNSLSLQRRQNNYINGGLNLWNLKTRELAQKAWLFERYLHQRVSNTPSSYIKLWEEELKNNNNNKTTTKQNQLQLHWQCKQAWTQLKTPQNKQTHYEHLPKLKKIYEDMMTTQSPEHNKFIPTPGQKEIMTKINSKHLPFKEIKKIINMKGRDLLWRYTLKALPKIYNMPCQQCGEDETSEHIFFNCKAHIKNTQEIFNYTLTKSGHTTHTWNVKILNHLQIALVANLIAIIFDKIWHKRNKLIHDEKEIIIHRQQVIRELIKTQRAAWDRTQAVINKTLRIKSKQRPEEQNKLDSLISLKLLQFSRQWNSPLHAIELPKHLKKYNNSLSTFYK", "length": 1047 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55E48-1", "protein_name": "thioredoxin-dependent peroxiredoxin", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MTKLKVGNIAPDFEAKNYLGQIVTLKEFKEKSQPIVLYFYPKDNSPECQKSCEFRDKYQKSIEAGAEVIGVSSDGEDSHKSFVSKYSLPFTLLTDKHSKLAKLYGVNGILLPGRKTFIIDKHGFMAVFMMVYSVQLLMSMNL", "length": 142 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55ED8-1", "protein_name": "Decapping nuclease", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKQTLNVIGLINFIKKQRSFNKSPITITKPLEITRFSYEGNQLFPAKLKKFKNPTIDSDLLVGFQGPDSIESDSQTPLSLVLNKLIETKHDVSKSNFISFRNSFRKLFESMYDSEKWNIQVQRINSTIHLGMDNPTQDFHQLKNFHLKSMYSGNYFEKISTIDNNNNPNDNKHKYCSIIQSKLFNNNFILACEIDCWKKSIQNNNNNQNNNNNENNNNDDDDENYNIDDYVELKTSRDIEDSKANYQFRSKKLIRIWFQAYIAGVSKIFLGIRNDDFFLKKCLNFNTHDLPNQAINWNKDEMLIYGNEILEFIKNNTCSGKSYTLSFNYPIISLVESDSINIINDQYLQYYLNIPKNFENNYNQNNNQNNNNNNNNENNSDDTKNNNIQNNNENNNIQNNNENNNQNNNEKNQKRNFGEEKEIKGDENEERLSKKQKKLE", "length": 440 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55EZ2-1", "protein_name": "Reverse transcriptase domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIAKTQIKCTTIYAPAKSNERHEWYKENLTEEILHSDIITGDFNVDCSVDNNLNKYIKTIFDEFEFTEIKNGITFPRNKSTIDRVFVSKKILHLNPIVTTKEIKLKSDHNMVIIELKIPEYEQQKKGERLWRQNLETLKMNSTSLKINKTIKYYNKKFEENTSKWYKLNICEQWLKLKDEIKKLSINIEIRESNKTKNKLKELAEKLETAKDSRAIFLKEEINNILKEQVRIKQANQTNTHINNKETPSKYLTRRLKVQRKTNEIPQILDPSNNCLVTKNEDILEVARRYYENLYQKRECNEDTHHELLKTFNKRIDQKILDEINQPIEEYEIRLGIEKIQEGKAPGKDGLLPTFYKNHINEILPIISKLYNHFWNTTIPKDFKQGILITIYKNKGDPNNLDNYRPITLLNVDYKIYSKIINNRILKFLNKIISPFQTGFVPRRLLHDNIITLNSTIEIIKREINTKEDMEPIITFYDFEKAFDSISHNAILRTLAHLKLPLKMVLTIMNLLNESETSVYINNSLSKSFTSKRGTKQGDPISPTIFALVVECMATTIINDRCINGVTKETIKILQFADDTATIAYNFMDHFLMNEWIKKFCQATSAKINQTKCSCITFKWNTRTLYTVIKSNERYLGFDFNNKGIKSKINTISDNIRAKLVTWNSTSSTYMGRLIMAKTYALSQLTFHTYINTTPQHNSIENNIVKFVFNTKSKNSLSLQRRQNNYINGGLNLWNLKTRELAQKAWLFERYLHQRVSNTPSSYIKLWEEELKNNNNNKTTTKQNQLQLHWQCKQAWTQLKTPQNKQTHYEHLPKLKKIYEDMMTTQSPEHNKFIPTPGQKEIMTKINSKHLPFKEIKKIINMKGRDLLWRYTLKALPKIYNMPCQQCGEDETSEHIFFNCKAHIKNTQEIFNYTLTKCGHTTHTWNVKILNHLQIALVANLIAIIFDKIWHKRNKLIHDEKEIIIHRQQVIRELIKTQRAAWDRTQAVINKTLRIKSKQRPEEQNKLDSLISLKLLQFSRQWNSPLHAIELPKHLKKYNNSLSTFYK", "length": 1047 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55F94-1", "protein_name": "Dynamin-like protein A", "gene_name": "dlpA", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MSVFKKKDKSDDKKKKHDEETPQGTFQPASQSTSNTNLNSLASSVNNGASVGSTNGSTPNNSNGSTPTYNHNNSAEELEKQKKEEDEKRKKSELEAAAAVVAKKKEDEEKQRKEQVELERKRRDEEIRRTNAAAANAANKELNEQVEISSLEQMGKLDPSSTIHDMFSFFPNEVYNSYEKLQYFSRDLNTAVSHPEIVFVGPRSSGKSSLIEAFIGRALNIVGGGNIVGVGGSNANGCSKRVLYLQFTNNIDFEVPKVTIKKDNTIKEFDHDIIVSIEQLNENLAKRNQLTNDYIEEPIYVSIESRTTLNLTLIDSPGLLFDQSQAESNKIESIVSSLLRPSHRLIIAVESCSQDWKSMSMGQYLKKIDPELSRSTFVFTKFHHTVRGFSSTRDINKYLSGTVPDIKGFFVTLPNHQVRASYSEANRFQEKIYQAHKRDMHALEQLQYDKRYERTIGVAPLRRYILNIVWKSYQDTIPRILKHLRSKRQTAEATLNELQKQSSSLDSTKLRSIASNYTVTFLQITEKLLSGTSEGNPSANGQTLDEEKSQQGDCGEWVDAYKEAIYIDPEEWNIPYWSSKLYGGQQLERLMAEFKAVCDNSKISEVKMDDIATASGINKLNNIPNYAWAASDLTSLISRDTFVPLIEQLCERAMYIMKRLTDIADKVIDSRRKSRCIGSSPFGGNGLNNINSGGNNGININDRLSNTDMDSLDQYPFFTHHVKNLYYDFVHRAAKGCKEKCMDEFYSSRTIYWELTEHPDSSLPSIRNDHHETKTAVCQLATKLFDSIRQRITKNVLLKLYNFFLVPMQTDLWNEIQAQITCLSNEQLEQLFEVQATREQLKQEEKKQQQILEKYSQIDEQFLKAASLFCRPLSNPTPSA", "length": 880 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55FX4-1", "protein_name": "SET domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MDINSNHIKKINDFKDKGNKEFNKEKNKDKLNKRAITYFQLGIKYFNDEKHKIEINDQINKLISILYSNLSLMYLKGDEIILSLEASNKSIEFNNQNSKAFYYQSICKSYLCDYKGSMESIDKAISISKQDEKVVQQRNRLIEITNNKVKEDVYFENVLKNQKLENVAYENSIEKGRYLISKRLIKRGEEILRIAPFSFSLNGKYVSKFCGVCYQKKSIDNLLKCKDCDDFAICKECKAPNEPLSKYHPNDLCVLYKLNNEYYKMNNFEIANEDNKERGLTDERRLYINTIYNIFKNKTNNKAVVEVDNAISSSVIDVLNLSKKLLNHTNESQRAYSDSTKMKTDILELIFKSFYGANTLKKDEISNIIRIVDCNSHGYSDVISQKKKASGLYPFSCYTNHSCIPNSDYFIDKHGVMVLYASSDIQESEAITISYIYFLNRVEKRRKDLLNGHNFFCTCDQCSFQSSLTEEVCDKCNEIIPSTIGNSNLVYKEPKSLKETGFNYICPKGHTKSSLVYDIDNDQLYPTIAENYSKCKDLRNFRKINIFKEMLENRDFVKKLTPREFEVTPLAKYIANPKKSNSMLFEELINLVRGSVECGLTKSIEESNYSTYLVYDYYDLYKSLLLESKPQILKLNSIRDIIIKLLTPMVYNQNKPRIDKKLNKHLSNKINLKKNK", "length": 676 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55G93-1", "protein_name": "Tubulin-specific chaperone D", "gene_name": "tbcd", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MENSEDISLNSSEKSIESSVVNLEDQQQSQQQTQQQTCQKTFVQEAPELTILIDKLIQLKHSNKDELISNTTRIIYIIDQYLEQPTLLDIHLNDIIQPLINFIKSNYINNSNNNNTTTTTTTIMTETEIVIKKLSIKNSFRIIYVLSKVRGFKTIVKLFQHEAIDLLPVLDQLEISYHQWVNINKQRDRLNEISVSYSSGINLKNYIKPEEESEQEVVDENNNNINNNHNIDDEYNENIISWEEVYVLALWVSLLVIIPFKFSSLDSASSGTASAAGDGGDGDGDGQLKSISSRILKLGKLALSDVSKIRDSFSELLSKLLNRPDMKFEQKQFIKWCTNSIQLISNNNNNNNQNNSSNNNILLIIGIYSTLATMFKKGNRLDFLPIDMNLYEKIMEANKYLSLSGSERITKKIFLKLLQRIAIIMLPPVSASWRYQKIIKPLLLKGELIKQINNNNNNNNNENNNEEGEEEEEEIPEEIDEILEEIMKSLKDKDTIIRWTSAKAIGRIVNLLPKDMGDQVIGLVIDQMFEKNEFIDADPSAWHGGCLALAELARRGLLLPERLDVVVPLVIRALFFDIIKGTYSIGSHVRDSACYLCWALARTYHNSILSPYLLPICRNLVVVSLYDREINCRKSASAAFQEMVGRHQGLVPNGIEIVTSADFFTVGNKNNSFTSLTTFIGKFQIDYYPIVIKHLATIKIYNWDLEIRQLASKSIHLLTNINPNDIVSNYLPLIIPNTQSDLVHVKHGASLAISEILISLFENNNINLLSDNLKMMILMTIKNTKNEKLFKGKGGVLIRIGMCKIIYSICLVEFSLDKNLSEIKKPTESTSTNGNEDRAAALKLKIAMLKAKTASQINKPIITPPSSKSTTNNNNNNNNNNLNDNEIAFNIILGYLNENLNHPNEEVQKEASKAFELLFSKYISSNEKISLLLELIDSHCKTLKFDINRSARRGSSLLLGSLPFNSANLSYDLLSKVVNELILSIFQDDPKFKDIETRVNSISSLYKIGIYILNLIFKNQENEQKEEEDFKKSKNYNLFIKIWNCLGLATNDYSIDKRGDIGSWVRELSCKVLFDFIKFIITNQNSSTTTTTASTTDLSIENLINEKMITEFICKLFQLSGEKLDKIRDVACKIIHELLWIENPSSINNIPHKEELKKIIVKDQDVHFNWFRTEESLPLICKVLKFNCYLYPLLFGLFSSLGGTSKYLINDSIQSIKQYFSSFDNDEKERFEKIISFSKAILEITNNTTQRMIQPTFRSIYNLLSTHIFDFLIINNLNEQSIFETILFNCYQIIESNQDDIYLLLNSIELFSYFFIQFENNNNEYIKDYSLKALLLLLSNLKYPKVRKLASDQLKKSTRLFINNNGDDETPSLIKSLIFNTKWDDSVDLIIEPLKSLLLLLNQKHLLELLSENPTKKPIPLAPPITSIEELKDKIQNPHKQSDDNNNNNNGELINNNTENNNNNNFDDNLPEDSQDLMEI", "length": 1480 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55GP8-1", "protein_name": "Rho GTPase-activating protein gacO", "gene_name": "gacO", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MSKLPPPPVQSSPQGFQLPSLHSVQLKPVRPPPQPTQQQLASNTSPREVGTSLSPQSPSNNINPSSSSSSPSSSIRQSPSSSPNVARKVPPTPTNNNGGPPTTTTTTTTTMPPPPAFIKKLSPSSSPILPKRIVSSPPLNGNTAPPPPPIVHLPPPPPTNLPPPPTLSPSSSTTTSPSSSSLNLSGGVPLPPRILRNSDGSANNNNNSNNNSNNNINSLNLSTSGGIPPPPSFFNNNNNNNNNSGSFVNSASSNGSPSLQSQNSVGYFKPPPPPVPTRSASLDPKQMGQFIKPQQNQNNSNNINNINNNNNNIILPPPPNININNNNFVPYIPSNNNQQQSTTPPPIVSISPLKRNSIDNSVVNKRLSQDLNTMLVNRLQHGLSPPVATPFFDDKILGSASKSAELKEKRDQEERERRERERIKKEKEDSEKKEKKEKKGKEEQEKKDKKKKEEQEKKDKKKKEEEEKKSKSSSSSSSSSKKSSSDNTIVNQNIFNNTLSQIMENQRDAQSLSPSSLPYPLILKLLTESIMSLNGPYTEGIFRITGSGTEVNRLKKQINEHDFSLDTQDPHVLAGLLKLWLRELVHPIIPSELYNDAIKSRSKEEVSRIISLIPDQNKEVLNFLIPFLKNVSQPHYAQYSKMDIDNVAMVFSPGLLRSTVLTTDLLLNSQYEKDFVKCLIEMSP", "length": 684 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55GR8-1", "protein_name": "Thiamin pyrophosphokinase thiamin-binding domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MEKQEEEVQQQQQQQQQQQQPDKNNKETITWDVAEYGGYLFDKKLKAHNPLNHQMPLQYHHSQSTPHIPSSLSTSSTTSIKKPSSSLSDDESGGSSSSTPHSSNTPRKQFSFDDHCALILANQKLPKKLVDYFWDKCSVRICADGGANRLYSLGTKINQSSRWIPDYIKGDLDSLHEGVSDFFSKKGSSIVLDSSQDTSDLQKCFELIIDLEKGSGIKYRKIFILGGLGGSFSHEFANVNTLFDHPGRKIILASKDNLAWLLSSTYNHNIICRSETKCSLIPLSSKASQVTTSGLKWNLVKQSLNFGELISTSNVSLDNKVCVETSNPLIFIVDINP", "length": 337 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q561S0-1", "protein_name": "NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, mitochondrial", "gene_name": "Ndufa10", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MALRLLRLVPASASARGLAAGAQRVGRIHTSVHCKLRYGLLASILGDKTTKKLHEYSRVITVDGNICSGKNKLARDIAEQLGMKHYPEAGIQYSSSTTGDGRPLDIEFSGSCSLEKFYDNPKSNDGNSYRLQSWLYASRLLQYSDALEHLLSTGQGVVLERSIYSDFVFLEAMYNQGFIRKQCVDHYNEIKRLTLPEYLPPHAVIYIDVPVSEIQSRIQKKGDPHEMKVTSAYLQDIEDAYKKTFLPKMSEICEVLVYSSWEAEDSTKVVEDIEYLNYNKGPWLKQDDRTFHNLRMLVQDKREVLNYTTVPVYLPEITIGAHQGSRIYDSFRELPGRKYAPGYNADVGDKWIWLK", "length": 355 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q568T5-1", "protein_name": "Chondrolectin", "gene_name": "chodl", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MRATLRILCALTFLVSCSRGARVVSGQTVCQGNPEHPCYKIAYFKDVSSRVAFWEALQACEMDGGSLLSIENTAEQKHIEHLLRELSVSSSTGPASITDGDFWIGLTREEGDNAQEPGAFASCPNLYRWTDGSVSLFRNWYADEPSCGGEACVVMYHQPTALAGPGGPYLYQWNDDRCNMKHNFICKYEPESHLVKVQSDRPGGHDVDLSTEDKEDRRTPPTDEDESPRLIIAGPSSMLLIYVIIPTIPLLLLILVASGTCCFQMLSKSKPRTKTSVNQSTLWISKTPKIDSGMEV", "length": 296 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q5HYN5-1", "protein_name": "Cancer/testis antigen family 45 member A1", "gene_name": "CT45A1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MTDKTEKVAVDPETVFKRPRECDSPSYQKRQRMALLARKQGAGDSLIAGSAMSKAKKLMTGHAIPPSQLDSQIDDFTGFSKDRMMQKPGSNAPVGGNVTSSFSGDDLECRETASSPKSQREINADIKRKLVKELRCVGQKYEKIFEMLEGVQGPTAVRKRFFESIIKEAARCMRRDFVKHLKKKLKRMI", "length": 189 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q5I0J8-1", "protein_name": "PHD finger protein 11-like", "gene_name": "Phf11l", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAQEEPGGSNSVLNGDANSDKKMEKWTCALCPEGHDWSVIYFEPSSNIAAHENCLLYSSGLVECGPHDPRNPARSFAVKSVKKEIWRGRRLKCSFCNNKGATVGCDLQSCPKNYHLHCAKEDRAILQVDEDYGTYKLFCQRHAPGGQEPTQVDAAVKASFLKKCLEAGLLTELFEQIQQKMISIHGRFMDDTASESDYEGIKILLFDCGLFKDTLIKFEEAIKSKACECEERLNQMKQQLELLADLQQNLRSFQECGVLDPSGSTSGSLLPPEDHQCRCQESPEVQAGSGDSL", "length": 293 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q5J3E6-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vom1r12", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MDSKDLAIGVIFILQCSMGILRHFILLSYYLMLHYNKHSLKPIDLILMNMFIANFLIIFPKSMLQTVEAFGIKLLFSVFVCKFLLYIERVGRSVSIATVCLLSVFQAITISPRNSCLYGLKVKVPKYISLSIFLCWALYFVVNMILPVYAYIKWSSNNMTYKRTLKYCFSVGHDEFTGSFFTILFVFPEVFLAILIVWSGSSMVVILYRHKQQVQHIYCNYASTRTSPESRATKSIVVLVSVFICFYSISSILYGCIALFCDNSWSLINIANIISLCFPVLGSFVVSHNPDFPRFSLSWIRNTRRV", "length": 306 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q5J3E9-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vom1r15", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MVNDRMESKDLAVGVIFILQCSMGILRHFTLLSYYLMLHYNKHTLKPIDLILMNMFIANFLLIFSKSVLQTVEIFGMELFFNVFVCKFLLYIERVGRSVSVATVCLLSVFQAITISPRNSCLNGLKVKVPKYINLSIFFCWPLYFVINMILPVYGCIKWNSNNMTYKRSVKYCFSIGHDELTSSIFTILFVFPEVFLAILIVLSGSSMVVTLYRHKQQVQHIYCNYACTRTSPESRATKSIVVLVSVFICFYSVSSILYGCIALFCDDSWWLINIAHIISLCFPIFGSFLVSHNPALSRFSLSWIKNTRRV", "length": 311 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q5J3F0-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "LOC100911184", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MDFWNLAIRIIFLSQIIIGILGNVSLLFYYLVLYYREFTLKSTELILMHLMVANIIIIFSAGVPQTMTIWGMKQFLNDFGCKLLLYIHAVGRSVSICTTCLLSVFQAMTIRPQKFCGNDHKVTMERYLGCFISFLWVLYFLVNFIFLVYTYIKKNSNNETRKRDFGYCSTVGSDKISDSLYATLVMCPEVFFSVLIAWSSGSMIVILYRHKQKVKYIYSTHVSRRDYPESRATQNILAQMFTFLAFYTLSSTLRGSIALLSNHSWWLMNINHFTSLCFPSFGPFVLMSHYSIVSRFILFWLRKNCSNFLL", "length": 310 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q5JQC4-1", "protein_name": "Cancer/testis antigen 47A", "gene_name": "CT47A1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MSATGDRHPTQGDQEAPVSQEGAQAEAAGAGNQEGGDSGPDSSDVVPAAEVVGVAGPVEGLGEEEGEQAAGLAAVPRGGSAEEDSDIGPATEEEEEEEGNEAANFDLAVVARRYPASGIHFVLLDMVHSLLHRLSHNDHILIENRQLSRLMVGPHAAARNLWGNLPPLLLPQRLGAGAAARAGEGLGLIQEAASVPEPAVPADLAEMAREPAEEAAEEKLSEEATEEPDAEEPATEEPTAQEATAPEEVTKSQPEKWDEEAQDAAGEEEKEQEKEKDAENKVKNSKGT", "length": 288 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q5QNN9-1", "protein_name": "Trace amine associated receptor 12e", "gene_name": "taar12e", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MMSLNETQTENILLCYPLLSNSCPKLHRLAVVQVGLYVFLLLMILTTVFGNLLIIISISHFKHLQSPTHLIVRSLAACDCLLGLLVMPYSMVRSVEGCWYLGDVVCKVHSSLDMTFCISSLLHLGLISVDRYWAICDPLRYRLRVTNITVTVFIVFIWLFSFVYSFYVVFSGVNTVGLETFIMQVYCVGSCVLYFNKQWGLICPILVFFLPGAIMSSLYMKIFHVARKHAKVMSERVTGGLKSQSSAQRERKAAKILAIVMGVFLFCWLPFFTVNALDPFFNFFTPADIFDAVIWFAYLNSTCNPLIYGFFYPCFQKAFKILIFTYICGVRNLDTFA", "length": 337 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q5QNP0-1", "protein_name": "Trace amine associated receptor 12g", "gene_name": "taar12g", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MTSNESENIQLCYPLLSNSCPKLHRLAVVQVGLYICLLLMILTTVFGNLLIIISISHFKHLQSPTHLIVRSLAACDCLLGSLVMPNSMVRSVEGCWYLGDVVCKVHSSLDMTLCISSLLHLGLISVDRYLAICDPLRYRIRVTNTTVTVFTVFIWLFSVVYSFYVKFSGITAVGLEMLILQTYCVGRCVVFFNKQWGLICPVLAFFLPGAIMSSLYMKIFHVARKQAKVISERVTGGLKSQSSAQRERKAAKTLAIVMGVFLFCWMPFFTLTALDPFFNFLSSADVFDALFWFAYLNSACNPLIYGFFYPCFQKAFKILIFTYICGVKKANTLTFE", "length": 336 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q5R1F6-1", "protein_name": "T cell receptor alpha variable 5N-4", "gene_name": "Trav5d-4", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKTYAPTLFMFLWLQLDGMSQGEQVEQLPSILRVQEGSSASINCTYENSASNYFPWYKQEPGENPKLIIDIRSNMERKQTQGLIVLLDKKAKRFSLHITDTQPGDSAMYFCAAS", "length": 114 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q5RKI7-1", "protein_name": "Solute carrier family 7 member 13", "gene_name": "Slc7a13", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAMDIEKKIYLKRQLGYFWGTNFLIINIIGAGIFVSPKGVLQYSSMNVGVSLCVWVFCAVLSMTSTLCAAEIGITFPYTVAHYYFLKRCFGPFVAFLRLWTSLFTGPGVLASQALLLAEYGIQPFYPSCSAPAVPKKCLALAMLWIVGILNSRGVKELSWLQTVSMVLKMGILSFISLSGLFLLVTGRKENVRRLQNAFDAEFPEVSRLIEAIFQGYFAFSGGGSFTYVAGELKEPSKTIPRCIFTALPLVTVVYLLANLSYLTVLSPQELLSSDAVALTWTDRVIPQLTWSVPFAISASLFSNLVTSVFETSRTSYIASRNGQLPLLCSTLNVHSSPFIAVLLDVSMGSIAIVLTNLIELINYLFFVFSIWTVLSVIGILKLRYQEPNLHRPYKVFSPFLFITAAISLSMVLIPLIKSPKMQYIYVFLFFLGGLLFYVPLIHFKLKLIWFQKLTCYLQLLFNICIPDVSDEHVAEEES", "length": 479 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q5XHX8-1", "protein_name": "Sperm microtubule associated protein 2", "gene_name": "Spmap2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGELGEHRSRSSLLSIPVLDTKTSGGSEYRESDGSLDLQSTLFEDHWLQSSQATTERNTDDPEEEIPPEEMVGEELPEVSNLEDSLRRDLEVEVVGMSHLSINERTTPTTSSAKCRKKKNHRLLELAKPKFNWQCLKDRTGRCCKGHVWISPRKTNLQFCLYWPSVYWTERFIEDTTLTITVPEVSRRVEELSRPKRFYQEYYNNNRTTPIWPIPRSTLEYQASNRLKRLATPKIRNNIWSINMSEVSQVSRAAQMAVPTPRTLRLAKPRAPATLLEEWDPMPKPKPYVSDYNRLLQLATPKALSEKCVPDRSPQWEVLNVTKNAVASSRIISLAQPKIRKDLNEGYNPYYISPASLVAQASPRIYELAVPKHITKKV", "length": 378 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q63550-1", "protein_name": "BPI fold containing family A, member 2F", "gene_name": "Bpifa2f", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MFQLGSLVVLCGLLIGTSGSLFDIFQNPELDVESVWSEINYRIRYALETMDLDMLADYLSKRGIELKIKDLRILNLNHEVSPNGDEVTLKMPMALNASLSLPARDLTTDVSISMEAITSFAIEKDPKTGRRVLNMQRCSLNTDNTSISLLNRKSNFVNLALDSALYLIKRGLTLPVRRQLCPVLQLIISNTFHPDEISNPQTAIST", "length": 206 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q64583-1", "protein_name": "Cytochrome P450 2B15", "gene_name": "Cyp2b15", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MELGVLLLLTFTVGFLLLLASQNRPKTHGHLPPGPRPLPFLGNLLQMNRRGLLRSFMQLQEKYGDVFTVHLGPRPVVILCGTDTIREALVDQAEAFSGRGTVAVLHPVVQGYGVIFANGERWKILRRFSLVTMRNFGMGKRSVEERIKEEAQCLVEELKKYKGALLNPTSIFQSIAANIICSIVFGERFDYKDHQFLRLLDLIYQTFSLMGSLSSQVFELFSGFLKYFPGVHKQISKNLQEILNYIDHSVEKHRATLDPNTPRDFINTYLLRMEKEKSNHHTEFHHQNLVISVLSLFFTGTETTSTTLRYSFLIMLKYPHVAEKVQKEIDQVIGSHRLPTLDDRTKMPYTDAVIHEIQRFADLIPIGLPHRVTNDTMFLGYLLPKNTEVYPILSSALHDPRYFDHPDTFNPEHFLDVNGTLKKSEAFLPFSTGKRICLGEGIAQNELFIFFTAILQNFSLASPVAPEDIDLSPINSGISKIPSPYQIHFLSRCVG", "length": 495 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q66X01-1", "protein_name": "NACHT, LRR and PYD domains-containing protein 9C", "gene_name": "Nlrp9c", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MVDSSSYGLLQYFQKLSDEEFQRFKELLQKEQEKFKLKPLSWTKIKNTSKEDLVTQLYTHYPRQVWDMVLNLFLQVNRKDLSTMAQIERRDKQNKYKEFMKNLFQYIWTSETNTYMPDRSYNTIIDRQYKALLDIFDSESDPATAVVLGTRGKGKTVFLRKAMLDWASGVLLQNRFQYVFFFSVFSLNNTTELSLAELISSKLPECSETLDDILSNPKRILFVLDGFDYLKFDLELRTNLCNDWRKRLPTQNVLSSLLQKIMLPECSLLLELGESSCSKIIPLLQNPREIIMSGLSEQSIYFYCVSFFKIQLGVEVFKDLKKNEPLFTLCSNPSMLWMICSSLMWGHYSREEVISSSESTSAIHTIFIMSAFKSIFGLGSSKYKRFKLKTLCTLAVEGMWKQVYVFDSEDLRRNKISESDKTVWLKMKFLQIQGNNIMFYHSTLQWYFATLFYFLKQDKDTYHPVIGSLPQLLGEIYAHKQNQWTHAQTFFFGIATKHVITLLKPCFGNISFKTIRQEIIRYLKSLSQPECNEKLVHPKKLFFCLIENQEERFVSQVMNLFEEITVDISDSDDLGAAEYSLLRASKLKNLHLHIQKKVFSEIHDPEYGSLENFKLDQKFSAINWTMLSILFCNLHVLDLGSCHFNKKVIEVLCNSLSPTPNMPLTVFKLQRLLCSFMTNFGDGSLFCTFLQIPQLKYLNLYGTDLSNDVVEMLCSALKCSTCRVEELLLGKCDISSEACGIMATFLINSKVKHLSLVENPLKNKGVMFLCKMLKDPSCVLESLMLSYCCLTFIACGHLYEALLSNKHLSLLDLGSNFLEDIGVNLLCEALKYPNCTLKELWLPGCYLTSECCEEISAVLTCNKNLKTLKLGNNNIQDTGVKRLCEALCHPKCKVQCLGLDMCELSNDCCEDLALALITCNTLKSLNLDWNALHHSGLVMLCEALNHKKCKLNMLGLDKSSFSEESQTFLQAVEKKNNNLNVLHFPWVEDELKKRGVRLVWNSKN", "length": 1004 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q675C0-1", "protein_name": "Taste receptor type 2 member 102", "gene_name": "Tas2r102", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MEPVIYSFATLLIHVEFIFGNLSNGFIVLSNFWDWVIKRKLSTIDKILLTLAISRITLIWEIYTWFTSVYGPSSFAIGMKLQILYFTWILSSHFSLWFATALSIFYLLRIANCSWKIFLYLKWRLKQVIVGMLLASLVFLPGILTQRTLEERPYRYGGNTSEDSMETDFARFTELILFNLTIFSVIPFSLASISFLLLIFSLWKHLRKMQLSSRGHGDPSTKAHTNALRIMVSFLLLYSIYFLSLLLSWIAQKHHSKLVDIIGIITGLMYPSAHSFILILGNSKLMQTSLWILSHLRCRLKGENILNPSGNQVTSCYIFCIANKSVS", "length": 327 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q68FP3-1", "protein_name": "C-C motif chemokine 6", "gene_name": "Ccl6", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MRHSKTAISFFILVAVLGSQAGLIQDTVKEDRPFNPTIIHQGFQDSSDCCFSYASQIPCSRFIYYFPTSGGCTKPGIIFVTRKRKRVCANPSDQRVQTCISTLKLGPRSGNSAIA", "length": 115 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q6EKJ0-1", "protein_name": "General transcription factor II-I repeat domain-containing protein 2B", "gene_name": "GTF2IRD2B", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MAQVAVSTLPVEEESSSETRMVVTFLVSALESMCKELAKSKAEVACIAVYETDVFVVGTERGCAFVNARTDFQKDFAKYCVAEGLCEVKPPCPVNGMQVHSGETEILRKAVEDYFCFCYGKALGTTVMVPVPYEKMLRDQSAVVVQGLPEGVAFQHPENYDLATLKWILENKAGISFIINRPFLGPESQLGGPGMVTDAERSIVSPSESCGPINVKTEPMEDSGISLKAEAVSVKKESEDPNYYQYNMQGSHPSSTSNEVIEMELPMEDSTPLVPSEEPNEDPEAEVKIEGNTNSSSVTNSAAGVEDLNIVQVTVPDNEKERLSSIEKIKQLREQVNDLFSRKFGEAIGVDFPVKVPYRKITFNPGCVVIDGMPPGVVFKAPGYLEISSMRRILEAAEFIKFTVIRPLPGLELSNVGKRKIDQEGRVFQEKWERAYFFVEVQNIPTCLICKQSMSVSKEYNLRRHYQTNHSKHYDQYTERMRDEKLHELKKGLRKYLLGSSDTECPEQKQVFANPSPTQKSPVQPVEDLAGNLWEKLREKIRSFVAYSIAIDEITDINNTTQLAIFIRGVDENFDVSEELLDTVPMTGTKSGNEIFLRVEKSLKKFCINWSRLVSVASTGTPAMVDANNGLVTKLKSRVATFCKGAELKSICCIIHPESLCAQKLKMDHVMDVVVKSVNWICSRGLNHSEFTTLLYELDSQYGSLLYYTEIKWLSRGLVLKRFFESLEEIDSFMSSRGKPLPQLSSIDWIRDLAFLVDMTMHLNALNISLQGHSQIVTQMYDLIRAFLAKLCLWETHLTRNNLAHFPTLKLVSRNESDGLNYIPKIAELKTEFQKRLSDFKLYESELTLFSSPFSTKIDSVHEELQMEVIDLQCNTVLKTKYDKVGIPEFYKYLWGSYPKYKHHCAKILSMFGSTYICEQLFSIMKLSKTKYCSQLKDSQWDSVLHIAT", "length": 949 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q6NXT2-1", "protein_name": "Histone H3.3C", "gene_name": "H3-5", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MARTKQTARKSTGGKAPRKQLATKAARKSTPSTCGVKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFNTDLRFQSAAVGALQEASEAYLVGLLEDTNLCAIHAKRVTIMPKDIQLARRIRGERA", "length": 135 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q6P3W6-1", "protein_name": "NBPF family member NBPF10", "gene_name": "NBPF10", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MVVSAGPWSSEKAEMNILEINETLRPQLAEKKQQFRSLKEKCFLTQLAGFLANRQKKYKYEECKDLIKFMLRNERQFKEEKLAEQLKQAEELRQYKVLVHSQERELTQLREKLREGRDASRSLYEHLQALLTPDEPDKSQGQDLQEQLAEGCRLAQHLVQKLSPENDEDEDEDVQVEEAEKVLESSAPREVQKAEESKVPEDSLEECAITCSNSHGPCDSNQPHKNIKITFEEDEVNSTLVVDRESSHDECQDALNILPVPGPTSSATNVSMVVSAGPLSSEKAEMNILEINEKLRPQLAEKKQQFRNLKEKCFLTQLSGFLANQQKKYKYEECKDLIKFMLRNERQFKEEKLAEQLKQAEELRQYKVLVHAQERELTQLKEKLREGRDASRSLNEHLQALLTPYEPDKSQGQDLQEQLAEGCRLAQHLVQKLSPENDNDDDEDVQVEVAEKVQKSSAPREMQKAEEKEVPEDSLEECAITYSNSHGSYDSNQPHRKTKITFEEDKVDSTLIGSSSHVEWEDAVHIIPENESDDEEEEEKGPVSPRNLQESEEEEVPQESWDEGYSTLSIPPEMLASYQSYSSTFHSLEEQQVCMAVDIGRHRWDQVKKEDQEATGPRLSRELLDEKGPEVLQDSQDRCYSTPSGCLELTDSCQPYRSAFYILEQQRVGLAIDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYVLEQQRVGFAFDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDEEEEEDQDPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEENHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLEEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYVLEQQRVGFAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDEEEEEDQDPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLEEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYVLEQQRVGFAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDEEEEEDQDPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYVLEQQHVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYVLEQQHVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYVLEQQHVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYVLEQQHVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQDPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYVLEQQHVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYVLEQQHVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYVLEQQHVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDEEEEEDQDPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGYLELTDSCQPYRSAFYVLEQQHVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELCDSCQPYRSAFYVLEQQRVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDKIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLNGVLMEVEEREVLQDSLDRCYSTPSMYFELPDSFQHYRSVFYSFEEQHISFALYVDNRFFTLTVTSLHLVFQMGVIFPQ", "length": 3795 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q6UGQ3-1", "protein_name": "Secretoglobin family 2B member 2", "gene_name": "Scgb2b2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKGTLLLLALLVTGELGFQRTEACIPFFGVYLGILSGNRIGLHTELAPFDPTVEEKEAFEKIQDCYEEEGLKAKTEDMKLMTTILFSSECRSYYTKEVLKNILVKFSKKLTHGS", "length": 114 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q6YCH2-1", "protein_name": "TD and POZ domain-containing protein 4", "gene_name": "Tdpoz4", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSGELEAKSRGDTQSHEQKLCYRWTISNFSFFVEETEEYITSLVFSLEDNDKMTWCLRVYPTGVDEKNKDYVSLYLILLSCEKGSVWAKFEVCILNAKGEKCNTERIPSFSRIQPHQPFGFEKFITRDSFLSPAQVLTPDDKFTLLCKVSVLQDSFSISGQNPRPAIKVTRCTLENDVGELWENPLFTDCSLLVAGHEFRAHKAILAARSPVFRAMFEHEMEERLTNCVEIHDLDPQVFKEMMGFIYTGKVPHLHSHSMACDLLAAADRYGLEDLMVMCEDALCRSLSVENAAHTLIVADLHSTEHLKTQALDFIIVYASEVSKTSGWMSMVESHPRLVAEAFHSLASAQRVFWALPFKQLKWSLRPTQL", "length": 370 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q6ZMA2-1", "protein_name": "Olfactory receptor", "gene_name": "Or1o1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MNCTQSPGFILLGLSSDPEKWQLFFSIFLALYLLGFLGNLLLLLAIGADVHLHTPMYFFLSQLSLVDLCFITTTAPKMLEALWTGDGSISFSGCLTQMCLFGVFADMDNLLLAVMAIDRYAAICQPLLYPLLMTPCRCGVLACGSWGIAHCASLVYTLLLSQLSFHSNQEIPHFFCDSRPLLWLSCSDTHLNEFLMMVLSALLGISALLCIVSSYGCIFCAVARVPSAKGRRKALATCSSHLSVVLLFYSTVFATYLKPPSTSHSSGEVVAAVMYTLITPTLNPFIYSLRNKDVKNSLKKLLNMEKPLD", "length": 309 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q70YC5-1", "protein_name": "Protein ZNF365", "gene_name": "ZNF365", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MQQKAFEESRYPWQESFENVAVCLPLRCPRCGDHTRFRSLSSLRAHLEFSHSYEERTLLTKCSLFPSLKDTDLVTSSELLKPGKLQSSGNVVKQKPSYVNLYSISHEHSKDRKPFEVVAERPVSYVQTYTAMDLHADSLDGTRSGPGLPTSDTKASFEAHVREKFNRMVEAVDRTIEKRIDKLTKELAQKTAELLEVRAAFVQLTQKKQEVQRRERALNRQVDVAVEMIAVLRQRLTESEEELLRKEEEVVTFNHFLEAAAEKEVQGKARLQDFIENLLQRVELAEKQLEYYQSQQASGFVRDLSGHVLTDISSNRKPKCLSRGHPHSVCNHPDLKAHFHPKGRNHLKKAKDDRASMQPAKAIHEQAESSRDLCRPPKKGELLGFGRKGNIRPKMAKKKPTAIVNII", "length": 407 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q71LE2-1", "protein_name": "Histone H3.3", "gene_name": "H3-3A", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA", "length": 136 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "Q7KR10-1", "protein_name": "Probable cytochrome P450 12d1 distal, mitochondrial", "gene_name": "Cyp12d1-d", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MNTLSSARSVAIYVGPVRSSRSASVLAHEQAKSSITEEHKTYDEIPRPNKFKFMRAFMPGGEFQNASITEYTSAMRKRYGDIYVMPGMFGRKDWVTTFNTKDIEMVFRNEGIWPRRDGLDSIVYFREHVRPDVYGEVQGLVASQNEAWGKLRSAINPIFMQPRGLRMYYEPLSNINNEFIERIKEIRDPKTLEVPEDFTDEISRLVFESLGLVAFDRQMGLIRKNRDNSDALTLFQTSRDIFRLTFKLDIQPSMWKIISTPTYRKMKRTLNDSLNVSQKMLKENQDALEKRRQAGEKINSNSMLERLMEIDPKVAVIMSLDILFAGVDATATLLSAVLLCLSKHPDKQAKLREELLSIMPTKDSLLNEENMKDMPYLRAVIKETLRYYPNGFGTMRTCQNDVILSGYRVPKGTTVLLGSNVLMKEATYYPRPDEFLPERWLRDPETGKKMQVSPFTFLPFGFGPRMCIGKRVVDLEMETTVAKLIRNFHVEFNRDASRPFKTMFLMEPAITFPFKFTDIEQ", "length": 521 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q7M715-1", "protein_name": "Taste receptor type 2 member 117", "gene_name": "Tas2r117", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKHFWKILSVISQSTLSVILIVELVIGIIGNGFMVLVHCMDWVKKKKMSLVNQILTALSISRIFQLCLLFISLVINFSYTDLTTSSRMIQVMYNAWILANHFSIWIATCLTVLYFLKIANFSNSFFLYLKWRVEKVVSVTLLVSLLLLILNILLTNLETDMWTNEYQRNISCSFSSHYYAKCHRQVLRLHIIFLSVPVVLSLSTFLLLIFSLWTHHKRMQQHVQGGRDARTTAHFKALQTVIAFFLLYSIFILSVLIQIWKYELLKKNLFVVFCEVVYIAFPTFHSYILIVGDMKLRQACLPLCIIAAEIQTTLCRNFRSLKYFRLCCIF", "length": 330 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q7M719-1", "protein_name": "Taste receptor type 2", "gene_name": "Tas2r115", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MCAVLRSILTIIFILEFFIGNLGNGFIALVQCMDLRKRRTFPSADHFLTALAISRLALIWVLFLDSFLFIQSPLLMTRNTLRLIQTAWNISNHFSIWFATSLSIFYLFKIAIFSNYLFFYLKRRVKRVVLVILLLSMILLFFNIFLEIKHIDVWIYGTKRNITNGLSSNSFSEFSRLILIPSLMFTLVPFGVSLIAFLLLIFSLMKHVRKMQYYTKGCKDVRTMAHTTALQTVVAFLLLYTTFFLSLVVEVSTLEMDESLMLLFAKVTIMIFPSIHSCIFILKHNKLRQDLLSVLKWLQYWCKREKTLDS", "length": 310 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q7RTZ2-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase 17-like protein 1", "gene_name": "USP17L1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MGDDSLYLGGEWQFNHFSKLTSSRPDAAFAEIQRTSLPEKSPLSSETRVDLCDDLAPVARQLAPREKLPLSSRRPAAVGAGLQNMGNTCYENASLQCLTYTLPLANYMLSREHSQTCQRPKCCMLCTMQAHITWALHSPGHVIQPSQALAAGFHRGKQEDVHEFLMFTVDAMKKACLPGHKQVDHHCKDTTLIHQIFGGCWRSQIKCLHCHGISDTFDPYLDIALDIQAAQSVKQALEQLVKPEELNGENAYHCGLCLQRAPASNTLTLHTSAKVLILVLKRFSDVAGNKLAKNVQYPECLDMQPYMSQQNTGPLVYVLYAVLVHAGWSCHDGHYFSYVKAQEVQWYKMDDAEVTVCSIISVLSQQAYVLFYIQKSEWERHSESVSRGREPRALGAEDTDRRAKQGELKRDHPCLQAPELDEHLVERATQESTLDHWKFLQEQNKTKPEFNVGKVEGTLPPNALVIHQSKYKCGMKNHHPEQQSSLLNLSSTTRTDQESMNTGTLASLQGRTRRAKGKNKHSKRALLVCQ", "length": 530 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q7TMR7-1", "protein_name": "Monocarboxylate transporter 7", "gene_name": "Slc16a6", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MTQKNSKLCSRANVYTQVPDGGWGWVVAASFFFIEVFTYGVIKSFGVFFNDLMDSFDESNSKISWIISICVFIMTFTAPLSTILTNRFGHRLVVMGGGLLISVGMIAASFSQRVYQMYISIGIVSGLGYCFSFLPTVTILSQYFDKRRSMVTAVASTGECFAMFAFAPAITALKEHIGWRYSLLFVGLLQLNVMVCGALLRPIIIKGPGSPKAIPLEPRREVQYMLENEKTRTSIDSIDSGVELTTSPKNVPSEAKREQEVRVEQQQTLVVGPKHSQKRAPLLDFSILKDRSFICYTLFGLFATLGFFAPSLYIIPLGISLGIHPDRAAFLLSTMAIAEVFGRIGMGLVLNREPIRKIYIELICVILLTVSLFAFTFATEFWGLMLCSVFFGSMVGTIGGTHIPLLAEDDVVGIEKMSSAAGVYVFIQSISGLAGPPLAGLLVDQSKIYSRAFYSCAAGMALAAVCLALVRPCKKGLCQNPHSGENQTDGHRGKALQDIPEDFLEMDLGKCEPRAHMKMDPV", "length": 522 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q7TN50-1", "protein_name": "Mas-related G protein-coupled receptor member B8", "gene_name": "Mrgprb8", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MDSSIPDPEADLIQLNGSYHTETSPCVIESRVMILLSIIIAFFGLAGNAMVLWLLAFRMRRNVFSVYILNLAGANFLFLCTHTAFSLEKIIVLFHSVHIHIPLLFYTLSTLAYLAGVSMVTAISAEYWLSGIWPYWYQGQRLKHTTTVICTGLWGLALLLSLLEGKSCGFLGSTYNQDVCWKLDFIIVAWLLVLFAVLSRSIQVLLVRIFCGSQRTPVTKLHVTIVLTALVLVICGFPFGIIFYLLYWTTEVYYIMPCNSFHETILLLSYINSCANPIICLLVGSIRHCRFQCGTLRLLLHRAMQDIPEEEGEELEEVVGERVQNSIP", "length": 328 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q7TPX8-1", "protein_name": "Oogenesin-2", "gene_name": "Oog2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MNFYSPPTLMELARQCLLRDEYLAISALKDLPNMMFPVMFKEAFIDGHTKILTAMIPVWPFPYLSVGTMLKNLNLDTLKAVLEEIDILISKPVFSSRCKLREITLSHDLVVVWAGSHEVEGLPEFMEQEKPVENSPGYGTKNKLKVTTELQFMEGHLDECSTYLLQWAYQREDSIHLHCRKLKIYGLTKAAVIEMFKIVHAEYIEDLELSCLCLEYLDFLNPYLKQMSNLLSLTLDEIIYTLNIDDYRNLNEEKVITVISHLPTFHHLQELYVHGVIFIECLRCLKKPLEVLSFTDCDLSQSDLDYLPYCLNIFELRSLHLTDVRLSNLLLEPLGFLLERVRHTLKSLQLMSCEMGETHFNALLPALSQCYQLTVVNFYGNELSLLFLKKLLHHTAKLSQLADELYPAPQECYDNRDVVLSHRLENFCSELLDILRAIREPKKVTFGTIKCSKCGGSYVYDLETQCCFFEKNPPWA", "length": 476 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q7TQY5-1", "protein_name": "Olfactory receptor", "gene_name": "Or4k38", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEDSNRTVSSEFIFQGLCSSRQLEIFLLLPFSILYLMAVVGNLFVVILIIIDHHLHSPMYFLLANLSFIDFCLSSVTTPKLTIDLLKENKTISFVGYMRQIVCVHFFAGGEMVLLVTMAYDRYVAICRPLHYSSIMDRQKCIWLVVISWIVGFVHAISQMLLILDLPFCGPRVIDSFFCDIPLVMKLACMNTDTLEILINADSGILATTCFILLLISYTYILLTVQHRSKDGSSKALSTCTSHIIVVLLFFGPIIFIYLWPVSITWVDKFLAVFYSVITPLLNPAIYTLRNKDIKNAIKKLISHK", "length": 305 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q7TR72-1", "protein_name": "Olfactory receptor", "gene_name": "Or8k25", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEKYNLTIVTEFILVGITNHHEFQVPLFGLYLIIYLTSLVDNLGMIILTIVDSRLQTPMYFFLRHLATTDLGYSTAVGPKMLRNFLVDQNIISFYACAIQSSFFGMFIVCEFFILSAMSYDRYVAICKPLLYTVIMSQKACWILVTIPYLYSIIVSLLVNIKIFTLSFCGYNVISHFYCDALPLLTLACSNTHEIEAIILIFSAFNLLSSLLIVIGSYLLILMAILRINSAEGKWKAFSTCGSHLTVVIVFYGTLIFMYLQPTFTHSIDTGKVISIFYTQVIPMLNPLTYSLRNKDVKDVLKKPMEKVHNLFS", "length": 313 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q7TSF0-1", "protein_name": "Desmoglein-1-gamma", "gene_name": "Dsg1c", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDWHSFRIAALLLTSLVVLEVNSEFQIQVRDHNAKNGTIKWHSIRRQKREWIKFAAACREGEDNSKRNPIAKIHSDCAANQPVTYRISGVGIDQPPYGIFIINQKTGEINITSIVDREVTPFFIIYCRALNAQGQDLENPLELRVRVMDINDNPPVFSMTTFLGQIEENSNANTLVMKLNATDADEPNNLNSMIAFKIIRQEPSDSPMFTINRKTGEIRTMNNFLDREQYSQYSLVVRGSDRDGGADGMSAESECSITILDVNDNIPYLEQSSYDITIEENTLHSQLLQIRVIDLDEEFSDNWKAIIFFISGNEGNWFEIEMNERTNVGTLKVVKPLDYEAVKNLQLCIGVRNVAEFHQSIISQYRLTVTLITVTVLNVVKGCVFQPGSKTFIVDSRMEANHTVGEFLATDCETGQATNKFKNVRYRYVMGNNPENLLVVDSGIITLRNRVTMEQYERLNKRYEGTVLSIHDSLQRTCTGTIIMVLCGFWTTTEHPTTSTEKPVTLSITPNVDNVHFGPAGIGLLIMGFLVLGLVPFLLISCDCGGAPGGGAGFEPVPECSDGAIHTWAVEGPQPGGITTICVPQMPPGNANVIEYIDNSGVYTNEYCGREMQDLGGGERTTGFELMDGVKTSAAPEICQEYSGTLRRNSMRECRDGGLNMNFMESYFCQKAYAYADEDEGRPSNDCLLIYDIEGVGSPAGSVGCCSFIEDLDESFLDTLGPKFKKLADISLGKEIDSYPDPDPSWPPQSTEPICPQHMEQLASGHPSISPHFGKTTVISENAYPSGPGVQHPMLIPDPLGYGNITVRESYTTSGTLKPSVHFHDNQQASNVVVTERVVGPISGADLHGMLEIPALRDGTNVIVTERVIAPGSSLPNSLTIPNPRETSNVVVTERVIQPTSGMIGNLSIPP", "length": 911 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q803M0-1", "protein_name": "Protein phosphatase 1 regulatory subunit 3B", "gene_name": "ppp1r3b", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MPIELAMSLYLSSDEFLNPRASKYSRPLQPCLNQCKSSKLSFSSLKEQSEFNGVSRALMIPGRAKKHVSFADHKGLALTVVKIFSEFDDPIDIPDNIDNFFTSSLTVSEGKDKLTLDFDQPSADYLKFRQRIENDHVCLEHCMLKEKSIMGTVKVKNISFEKSVKLRITFNTWKNHTDVECQYVKDTYTGSNRDTFSFEASLPEQVPSHERIEFAICYEVNGDTLWDNNQGKNYRIIQSALRKSSNESNGGHQQYSQSDWDIHFDRYGSPRCSRGIFPHWPSYVGYEDIGPYY", "length": 293 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q80SW5-1", "protein_name": "Embryonic testis differentiation protein", "gene_name": "Etd", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDEKNPEAVPRPPEQNTELVPPKKSKSKKPANILIYLIDRHLGRPRNDMDLFEWVWTLK", "length": 59 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q80VJ6-1", "protein_name": "Zinc finger and SCAN domain containing protein 4C", "gene_name": "Zscan4c", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MASQQAPAKDLQTNNLEFTPTDSSGVQWAEDISNSPSAQLNFSPSNNGCWATQELQSLWKMFNSWLQPEKQTKEQMISQLVLEQFLLTGHCKDKYALTEKWKASGSDMRRFMESLTDECLKPPVMVHVSMQGQEALFSENMPLKEVIKLLKQQQSATRPTPDNEQMPVDTTQDRLLATGQENSENECNNSCNATEANVGESCSGNEMDSLLIIQKEQHPEHEEGNVVCQFPHGARRASQGTPSHHVDFPSAPTTADVPMEEQPKDLSRENISEDKNNCYNTSRNAATQVYSGDNIPRNKSDSLFINKRIYHPEPEVGDIPYGVPQDSTRASQGTSTCLQESLGECFSENDPREVPGLQSRQEQPISDPVLLGKNHEANLPCESHQKRFCRDAKLYKCEECSRMFKHARSLSSHQRTHLNKKSELLCVTCQKMFKRVSDRRTHEIIHMPEKPFKCSTCEKSFSHKTNLKSHEMIHTGEMPYVCSLCSRRFRQSSTYHRHLRNYHRSD", "length": 506 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q80VT8-1", "protein_name": "S100 calcium-binding protein, ventral prostate", "gene_name": "S100vp", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAQNLTSTEQEIMELLMILQEFSVKKIDKLDVQEVKRLFREELPNFLKAMDEATKNKILNDKGKEMPFDEIWDMIGRMALEYRKKNSNALKD", "length": 92 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q80XZ1-1", "protein_name": "Polypyrimidine tract-binding protein", "gene_name": "Smptb", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSRNSPPAAEGNGSKRFKGDSWGTRDPSRLVHILRLPSCVTEGEILCLALPFGEVSNLLFLRAKNQAFVEMSTEESANTMINYYTWMPPVLRGQPVHIQFAHYRELKVSSSPSQEISLSQAGDSREATASSLVAVPGQAAASGQTAVPSQLGAQPCLPPEDSYQAGTVALAPPASAVDTELVVAWQSPVLRILVENYFYRVTLEVLHQIFSRFGTVLKIITCTKNNRFQALLQYAHVMSAERAKLFLDGQNIYDACCTLRISFSGLTNLMVKYNNDKSRDYMRPDLPSDDSQPSPVQVQNMASALPAPAMSSASPYASIALPHTFAIPQAAGLANPEVFKTLHPQAIQEVAMASSSSSSSTAAAAVGAAEIAAAAVPGAEGSMVTSGSPGVGSPVLLVANLNQEKVTPRSLFILFGAYGDVHRVKILFNRKENALVQMADGSQAELALRHLNGHKLYGKALCILLSKHQSVKLPREGKEDQGLTKDYANSPLHRFKKPGSKNFQNIFPPSATLHLSNLPSLVSEEELKNLFSSNGYAVKAFRFFPKNHKMALIRMGSTEEAIQALVDLHGHLLGQNHHMRVSFSRMTI", "length": 588 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q810J1-1", "protein_name": "Pregnancy-specific glycoprotein 22", "gene_name": "Psg22", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEVSSELLSNGWTSWQRVLLTASLLTCWLLPITAGVTIESVPPKLVEGENVLLRVDNLPENLRVFVWYRGVTDMSLGIALYSLDYSTSVTGPKHSGRETLYRNGSLWIQNVTREDTGYYTLQTISKNGKVVSNTSIFLQVNSSLFICGRPSPPALLTIESVPASVAEGGSVLLLVHSLPDNLQSLLWYKGLTVFNKVEIARHRTVKNSSEMGPAYSGREIVYSNGSLLLQNVTWEDTGFYTLQIVNRYWKMELAHIYLQVDTSLSSCCDDFNSVQLRINPVPPHAAEGERVLLQVHNLPEDVQTFLWYKGVYSTQSFKITEYSIVTESLINGYAHSGREILFINGSLLLQDVTEKDSGFYTLVTIDSNVKVETAHVQVNVNKLVTQPVMRVTDSTVRIQGSVVFTCFSDNTGVSIRWLFNNQNLQLTERMTLSPSKCQLRIHTVRKEDAGEYQCEAFNPVSSKTSLPVRLTVMNE", "length": 475 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q863C3-1", "protein_name": "Gastrin-releasing peptide", "gene_name": "GRP", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MRGREVPLVLLALVLCLAPRGWAAPVTAGRGGALAKMYTRGNHWAVGHLMGKKSVAESPQLHEEESLKEQLREYAQWEEATRNLLSLLQAKGARGHQMPPWEPLSIHQPAWDSEDVSNFKDTGPQHEGRNPQLN", "length": 134 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q869X2-1", "protein_name": "Probable polyketide synthase 17", "gene_name": "pks17", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MTFNNIKDENNDDIAIIGMGFRFPGGGNNPYQFWNQLSNKMDGISKIPTEKWSRSFYEQKYINNEYGGVLKDEEWKNFDPLFFGISPKEAPIIDPQQRLLMTTLWEAFEDANIKPSTFRGSDTAVFIGMMNTDYQRCQFRDISYVNPYITPGTAGSFISNRLSFSFDLRGPSMTLDTACSSSLNAVYLGCQAIANGDSKMAIVGGVNGIFDPCFSMTFSGLNMLGHKGQCRSFDAGADGYIRSEGGGVCILKKYSDAIKDGDRIYCVIKGGSSNVDGYNAKTNIIQPSMKAQGENIEIALKKSGVNPSDIYYIEAHGTGTPVGDPIEIEAISRIFKDNHTPDAPLYIGSVKSNIGHLESAAGIASLIKVALSLKNRSLVPNIHFEKPNPLIKFEDWNIRVVTDEIQFPINKLINMGINCFGLSGSNCHMILSEAPINYDELLKTTNNNSTSSSSNDDKKEYLIPFSANCNISLDKYIEKLISNQSIYKDTILFKDFVKHQTISKSNLIKRKVITASDWDDFLNKRNETTSTSSLTSTISAPASSTPVIYVFTGQGPQWRDMGKALYETESVFKDAIDHCDKLLANYFGYSILQKLLSLESEDSPEIHHPILAQPSIFLIQVGLVALYKSFGISPSIVVGHSFGEIPSALFSDVISLETAVKIVYYRGLAQNLTMGTGRLLSIGIGADAYLEKCALLYPEIEIACYNDPNSIVITGSEQDLLGAKSTLSAEGVFCAFLGTPCSFHSSKQEMIKEKIFKDLSDLPESNVPCVPFFSTITGSQLSHKGFYNVQYIYDNLRMPVEFTKAISNIFNFIEENESYKNAIFLEIGPHPTLGFYIPKCKPSNSTITSKPIIVSPLHKKKEELTQFKLAISTLYCNGVEIDFASGQQLLPTSSSSGGGDISSFKESTNKLPRYQWDFEEYWDEPNQSKMVKRGPSNNLLGHDQFAGNTLMELFIDIDKSAHQYLKGHKIKGKYLFPGSGYIDNILRQFNGQDITIFNLEFSNPFFLKDGVQHHLQTSITPTTKGEFKVEFFIKDNRNSTKWTKTSNGRIGLFKHNPKNNKLDIEKLKSQCSFTTLTKSEVYNKLLLLSLPYGPTFQRVESCSIGDGCSFFKLSMSPCSEFDKDFLNPSIIDCAFHGLLVLSEGPQEIVFDRLQDMKFYSSNVPSTRPQFIYAFAKFDKIEGNSTHGSLNIILEDGTLLISIKNVKCTSLIRLKKQSIKYPSQNVYSHHWQSKDSPLTLIENQLIEEKSSESKINFEKLLNDKLFNYYLIRLLNQSIKSEFIEFDYKTSTVDTLDIGSKNAKLLEKIQSILNPIDSLDQSIDITSLKQAIIVKSSFKNEIKLVEKSIKRIVSLLKGGESEHFSPSNPSSPNDTPRNNSNNCSSKNNAASSDDADDDTNNEETINQLNNEPFNFSNSQFISNQNQLISKTIVNSFDRLINSIEIGEKKLIKIIDLSSIYQNYQLSKLLLLQLNQLLINLSNNNNIEIEYTIPSNTKNIDSITEETKSISNVLNIKYRSFDLQDDLESNGYLNSNYDLIITSLLLVSTNSIDSNEVLSKLYKLLLPKGQLILMEPPKGVLSFNLLFANDFKQSLEIKSEQEIKSLIIYCGFTKIETNLNTKDDEEQQQPPPPSILIVQAEKRDIESMSLTFSSDPKSLNSSYSNCIFIVSKEQKENPTSYIQEYFDITEFFCQNATIIEADDSELLTKTIESGVGKNDIIFFLVSLEELTIENYKQVTMQYTLVNQILLRNNLSTRFALLTYDSQNGGKNYLGSSLIGTFRYFLEFRSLNIFSIDVDKDSIDNLTLFLRLVDLSTIGDRETIVRNNKIFVQKIFKEPKLLSPSNNYEKNTNNLFLYSNSNLDFSFQSKEKLLHGCVEIKVMSTGINYKDSLFYRGLLPQEVFSKGDIYSPPFGLECAGYITRVAPSGVTRFKVGDQVVGFASHSLSSHVTTHQNKIVLKPENISFNEAAAVCVVYATSYYSIFHIGAFIADKESILVHSATGGVGLASLNLLKWKRNQLKKHGNSEISNDASIYATVGSKEKIDYLQEKYGDLITAIYNSRDTEYCDEIKQQSAQGGVDLILNTLSGDYLSSNFRSLSQVGRIMDLSVTQLVENDSLDFSNFKYHVGYNTIDLDRATKYNSKIIRDILTEVFDAISDGSLENIPVKVFPAIQVKTAIEYINERVHIGKIVVDFENFEQDILKPALQEKENPIQLNKVKKLEHTCDTLNNTILITGQTGIAVHILKWIISGSVLNSNKSQQQVTDFIILSRSSLKWELENLINQTKHKYGDRFRFHYKSVNIADLNSTRTAIDQVYSSCKNVSPIKSVLHFATVYEYILPENITQTVIDNTHNPKAVGAINLHNLSIEKDWKLENFILFSSIGAIIGGSKQCAYSSANLVLDSLSNYRKSIGLASTSINWGGLDAGGVAATDKSVASFLEGQGILLVSLSKILGCLDSVFQPSNSHLSNFMLSSFNIDNLLSSAPQMKRKMDHHLTNYKTSSASSDDSLGDSGSTQAKVISTISELLSIHPSKLNLDTRLKDYGIDSLLTVQLKNWIDKEFTKNLFTHLQLSSSSINSIIQRISSKSTSTSTPNPTNTSKQTATKKT", "length": 2604 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q869Z5-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MSHLTPKPNVLNVYGAGTPNFVKVQILLEEKNIPHVYHKIDFSKNEQFDPEFLKFSPNNKIPAIVDNTVEPNGISVFESAAILMYLSEKHQFTDLYADFKTDPALHAKHLEFLFFQMSGVGPMTGQLGWFLRQPEPKNTQAIERYSEEVKRLYRVLDKILSTNTWVAGEQYSIADISLLGWALYFLKGYYDDHITREQFPNVYRWLDLAAKRPAIIKVLETIQPKQK", "length": 227 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q86AE3-1", "protein_name": "Probable polyketide synthase 9/36", "gene_name": "pks9", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MGNLKNINLKEKGVAIVGIGFRIPSGNNENSISSPDDLFNNLKNGFDGVSSTSERWSDNFHKLGEISSPNAGLLPFKEWKSFDPLFFGINPSEAPLIDPQQRLLLKCTWEALEDASIDPISIRGTNTSVFIGSSTIDYLHTNKHQDSVLKNAIAQSTSAISNRISYCFDFNGPSLSIDTACSSSLNAVSQGYHSILNGTSNMSIVGGVNLILDVDIIKAYSILSMLSKTHGKCKTFDESGDGFTRGECVGVVVLKNLQDAVKDGNRIYCVINGSSSNVDGNGNMDKVNFYSPSKQSQFNNINSAFKSTNDKLSINDIQYIEAHGTGTKTGDPIETEAISMAFKNRDKSTPILIGSIKSNIGHCEAGSGVASLIKCCLMFKYQCFLPNIHFKNPNPLIKFNEWNLKVVTSPIPFNKRNNEKPVSMMINNFGVTGSNCCLLISEFKNNNNFKENINLESQSVNDRVLIPFSANSSNSLNQYQSKFKNIINNQFNFIDFTANQIYSKSNFLYQRSVVIASNSNELFENISNKKQIQTKNSIISNMSFKGKNPITIFVFSGQGSQYPKMALELYNNEVIFKKSIDLIDSKLSKYYGFSVWEKVKTIKDDDLTSIHDPIFAQPALCMISVSLFELYYHWGVNPSFILGHSLGEISASYCSGMIDLDTFCYTVYQRSIAQSKTNGCGRMLSINISDEEFKSMYSQKYPQIEIACYNSPQSIVVAGNESILNEISKELKEKEIFTTMLGSLSSFHTSSQQCTKDSILQLNIESNQPKVPIFSTVTTNLFNESNRFNSQYVYDNIIKPVKFTQTISNIYKHIESNQLNNEIVFIEIAPHPTLLFYIKQMVPSSLNESVSVYSALHKKKNDVEEFQQTISNLYCQNGYNINFKCQFNNKKSNQSINLPLYQWDEELYFTQAQTLEQHRKEGPPIDHLGTSNSYNSPFNNSYRTSIDIKNKPFLYLKGHMVKGKYYFPGCGYIDNIIQLYKNQDIFISFIEFKTPLILIEGINQYLQTNIQQTGKSEYRAQFHFKDQKSNEWIQSSNANFQLLDHGNDIPPKYNIKEIIENKCNLSKLTKNELYTHIKSKTGLNYTGVFQGVTECYIGGDCTLSVVSLESQTNSFLNIPILDTCLHGMIGLSNDQCQIVFDKAIGFKYYSSNIPANLKDYKDSVYVYSHLKSKSVDSFFGSIIVMLSDGSVLYEIEEVVCKSLIPIKDSLKIEYPNDELYKVHLQSKDSPIPTPSSFKSIIYENDFFHSALNIPEDLFKYISTLFYKDIIKRCPEININKINSHSVNEIISSFSKISKHERLFRFVFETIKENGILNSLEENDDAYFEFNEVIIKSSRIISKLLFPLESDNDNEDLPQSLFQNGLMDKIYKCRYLRKKNQMISHVIKHSIKEIINNNIIIRILEFGGGTASLSVEVIEEIIALLQENPNYQVEIEYTWSDISPAFIADAKNKINKIINDAAITNGFNVIYRPLKIDESLIETQSINPSYYDFVIMSNVLHVVKNIKQAVEQMYQLLTPNGQLLFLEPPYKSVLNDSIVGSFEQWWSFTDTDIRKDRCSMSQQSWCQLLKTCNFKDIAMSKECIFVGIVIHAQKPPISLLNSQPKRDNIIIYGGGNPIFVENIKLYSNSKSLIQIETIQEFNQLLSQSTITNDSIIYFIKTLETLSLDNFKQITLEYIEINRKLLQINSLCKHVLIVSDSRKTNYLASSVVGAARYFDEFQQLKLNTLDFDYDSTQNYINSNNKDMVQFINILTDSKTNVHKEMIIINNKVYYEIVQKEKNLKLKYNSESFENQNNLMCSLSPNLEYQLQSKQIKLRDNQVEVKTIATGINYKDYLNFSGSNSNGDDNTGLPQFGYEFSGIITRVGNNVKDYKVGDNVFGLSNSCTSSHIVTNYKKIQIKPSNLSHNEASSIPIDYLTSFMSLFNIGSLNIEDNESILIHLGSDGFGLSTFEILKWKGFNSNLFVTVNSYETKRYLQDNYGDFITGIYSNTDKSYVTEINKKLIKLGSKKKGVDLILNTLPSDFMDSNFKLLAKYGRIIDLTSNHLNQSEFLKNINFKYNHGYHNFELSLIQKNKIHKCLYEISNAFENGELKTIPIKEFTNLNIKDAIKYITNNKIEKITVSHDHEIYSDIIYRSLDEKEFSILKSNYQINSNNLGKNILVTGQSGIILEILKWIIKYSNINTIENVIILSRSSLKWELELLINETKLSNNNIKFHFKSVDIGDSEQVDNAINEILNENQQITNIDSIYHFAFQQITCKVQEINMKHLDISHGAKSMGAINLHNQSIKRNWKLINFVMASSAISLIGSTDLCTYVCANALLDSFSKYRESLGLPSTCICLGAIESTGFVSKNESVSVFLDGGGFHPTPINQVLGLLDLQIQNAGKFTNSMLSNFKPSKFKNNQQTSLFLKFDYLMNLKNNSEETKIENTGNKNIDELFIEKVSELFSMDESKINKNLRLIDYGADSLIIVQLKNWIDKEIGINLITIQQLQNNTISTSMKMILNSLMKNNQNIDDNNKDLPSNRIDYWKNEMKFEESIKPISNEIQSRNNSEKIILLTGTTGFLGGFLLFNMVRLDSCKLIYCLIRNKSKSNNPLDEIINNLKYHQLYEKLNQSQISKIIPIIGDLSMNKLGLSNDDYETISKNVNLIINPGADINQKSSYQDCKLVNVNGVKEIIKLSLSSLKQRIPIVNFSSFSVFFNQSLDKNFDESVLPSIDNIDNLPTEYMKSKVVGEYILLEASKKYNIPSILIRPPSIFLNPETGIGHISDFSLLSIQSCYELGYYPNQFENDFILINTITWLSNNITNIIMNDNCWTDSKMNIYNVHGKQIQSSLIIKPLEKHFNCKHINTNDWIDMVNNSNKKSCIKLKSFHSLDIILKSENNRYKPNENQSISLSTKSLLESMGSYNTDLEITDKMIISHINQIFNLNETI", "length": 2931 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q86AF8-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MFSKFSIKENKPKKVKSNSSKGFNNNEINSTNNNNNNNNNNNNNNNDSDNFINNNDSNNNNNFNNNNNNNSNNINNKTEDSNDISLLINQFIGSSPAPSTCSGSDKFSIKPKKIVTPSKRKNSTSGSDIIDFNNCNNNNNSKSNSDSNNNKYNNSNSNNNSCNNTNNGNERKMKGYDYGNNNSNNNYSSSSRDYNSNNNSSPRDYNNNNNNNNNNNNNNNNNSNNNSPRDYNNSRDYNNNNTNNNSSPRDSNSNNNRNSSSRDFSNNNSSPRDYNNSRNSNNSFLNNNNNNNNNSNNSNDNSPRDYNYSSSNSSPRDYNNNNDTFSKKRNNVGNSILEIKSNPTSPRIKPIMVWPRSSPRIVNKLPPVQSLVDLTEIEMIDDNNNNNNNNNNNNNNNNNNNNNNNSNNNNNKSGSNNNFSDSDSDKDNYNNNNNTNNNSFNSDSDNYNNSNNNNSNSNSNSNSNSNSNSNNNNNNNNNSNNNNNNNNNNNSNNSNKSNNNFSNIKILEKRRKSINEISDNLTTRNIEEIDSKMAHEFEHPFLEKLIFAGQRPPFVECDDYFLKRYKNQFQYYLDISMKSIINTRDIGEGDDDDEINSVPFKCTLCSYEYDEENNNENTNGFIDEADKIYNRSNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNSNSNNNNNNNFYDKKYFKNNYFQHLLSKHLNQIKAKGIQDTNVYNDEANIPLGSKKCDHLECSEIILKNEFTKHIKKLHHHHKDEDIDICPRCKILKKSIQKRIVKFSKKKQEKDDDNNSKPVSNKVATISHNPSPNNIDKDINNNNNNKNNKNNTNNLENDNNDNSSNNNYLENEEEPEIVFQDIKPNNNNNNNNNNNNNDDNNNDNNDNNDNENNNDNNNDNENSNNNNNNS", "length": 901 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q86BK9-1", "protein_name": "Mediator of RNA polymerase II transcription subunit 22", "gene_name": "Dmel\\CG32971", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MSDSKDEALLKSFKTQLKDNVLSMLLNFEELLKLVSPRTPGQITNDTEQELNAFEMQVRAGNFVRAGEALIKLVHDVKEYQIIYDYSNIEEEMDRQSEAMHAKVTEYDQTLIKMVKDLEEELSELEYEYYEKSGGPDLDSKDLLV", "length": 145 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q86IJ5-1", "protein_name": "Uncharacterized protein DDB_G0272718", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MPPHGHHHHHHGHHGHHEHITITPVYAPPQVVQPIYAPPPVVQPVYVQPPVVYPQATIVLETGHHHGHHHHHGHHGHHDHHHHGHHGHH", "length": 89 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q86IV6-1", "protein_name": "DNA replication ATP-dependent helicase/nuclease DNA2", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MNFFEKKNNNNNNSSNNNNNNNNNKNNNNKNLDKNNSSDRNNNNNGDKNNLKPTQKSLIDLWFQVDDEDEEYELSSLSNDGGSSFNSFKVNNRDTSIGSDIYSKTITPSSLALSTSSLISSTLTPPTQSPPFSKKNEKTSSFLNSPSSQKSKSNNSNVKEKLSPQYSSSSQLSDFFKKKKRPLLDNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTISSLNTNSNNNSSGSSNGSSSSSSGGGNKSSNNKKQKVSQSTSSTSLKEKQSQQSILSYLNPTPSLPTPIFDKPIERSDSNLATSSFSKLNFDDIPLDDEELSQKINTPSPKLILKNTFSSTPTQKSPSLSSTPPNKIKITDKKLPNSSSSSSSPPPSSAKSKLSHRSQSSPLSPLITNLNQNKSNEFDDINFNFNIPSPLKEINNKPNIKSNSKETLTPLTQIFHSSSPPPSIIIESSPSVCFSPTPTKNQSPTLSNLSPTFSFLSDTSPVKSPSQLFEFTFDDPLSPKLISSNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTNTFISKNNLINLFNEQSNQENVSTTTTTTTTTTTSTSTNNNNNNRYERVLIINVFYEVTQIFNNSNDKIHKKTLSGFSESIGESREIQLLDEWIYTPVRPGDIVNVIGEFDDNGEIIINNIQNLLILHPDILITGTELGGSLTCTRRSVLKEQIRVGNSNSSTVPIFGSIVHEIFQECLKNNRFHLDDINTFKQEIIGKSTFQLGLSSLGETQDTALNHLENWLPTIDKFAKTFILPSSSSSSASSLKKNLIEINSEKWHLSISKILEIEENIWSLMYGLKGKIDSSLEIKLVKQQQDEKQSKQSKQSKKKKQQTTSPNNNNNNNNNNNNNNNNNNNNNNNNNNGPTTCYLNVPFEIKTGKPYQIPYISHSSQVLIYTLLMNDRYDQDIEMGILYYLKSQEFKSVGLNYGLLHPILFERNQIRSLIVSRNLLAYFLNLNSQPLLKPNPILPEMLRDYHSCTKCYSIDPCVLYHKAIENGDQFTSSLGDLFLEKTNHLSSIHINYLKNWNKIISLEYSIKNNKRKLIWNKSRKFGEKNNSCIGELILISEEYSEITETFSYRFRVNPDKLLNSSISEGDYLLISVEDKYYGMGSGQLSNIINDIITITCREKLSEPPSLLSDYTTPNCNNNDPSYFGNYRNKPLIYIEYEDADQQQQQQQQQQQQQQQQQQQQQQQSQKQQKQKQPNFTQLRGLNNYVNNSKLTPFKWRVDIDEQLSGLSIVKSNLFNLFLKENQKLRSLIVDLEAPIFDKLEQENYWKSIDFQNDYPLLNIDQRNAIIKTLSAKDYSLIHGMPGTGKTTLVISLIHILWRLGKKVLITSFTHTSLDHLLLKFNKQYPNIEMLRVASSLNQIDPSLHRFTLEKQSFGNITQSKQYLERQQLVATSCLGINHQCLLKMQFDYCIIDEASILSQPISMGPILKCKSFVLVGDHHQLPPIVNNKEAGKLGLDISLFKQLSTSHPSSVSNLYHQYRMCNSIMSLSNHLIYNNRLVCGNQSISNLSLQTNYYHNNNNTTHIDLLDHINNWPQIICNPNSSVIFVNTDQLNNSTESSNGDLFYNQTEANIVAILTNCLINKLNINQSQIGIITPIRFQLNFIKKSILKYLSIENNNNNNNNNNNSNNNNNNSNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNQNNNQNYLKKIENLDILTIDKFQGKDKDCIIISFVRSNEKKEIGELIKDWKRMNVAFTRAKKKLIFVGSKSSLSKFPFFLDFFEFLDSKNWIYNLNNKIQF", "length": 1838 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q86JI5-1", "protein_name": "Probable polyketide synthase 5", "gene_name": "pks5", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MDMKLNDIENENFINQMKGVAIVGIGFRIPSGNSENSISSPDDLFNNLKNGFDGVSSTSERWSDNYHKLGEISSPNAGLLPLNEWKSFDPLFFGINPSDAHHIDPQQRLLLKCTWEALEDASIDPISIRGTNTSVFIGSSTIDYLHANKHPDLILKNAIGFSPSTLSNRISYCFDIHGPSLSIDTACSSSMNAVTQGYHSILNGTSNMSIVGGVNFVIDVETIKGFSYLNMLSKTHGKCKAFDESGDGFTRGECAGVVVLKKLDDAIRDGNRIYCIINGISSNIDGNGIADKANFYSPSKQSQFNNINLAFKSTNGKISVNDIQYIEAHGTGTKTGDPIETEAISMAFKNRDKSTPILIGSIKSNIGHCEAGSGVVSLIKCCLMFKYQCFLPNIHFKNPNPLIKFNEWNLKVVTSPIPFNRNNEKSVSMMINNFGVTGSNCCLLISEFKKQDYESYENNIGSINKNILVPFSANSPKSLDQYQSKIKNIINNQFNFIDFANNQIYSKSNYLYQRSVVIANNSNDLVNKILNKKHIQTKNPIISNMSFKGKNPITIFVFSGQGSQYPKMALELYNNEVIFKKSIDLIDSKLSKYYGYSVLEKLRSIGDDDTTSIHDPTIAQPAMCMFSVSLFELYKHWGVNPSFILGHSLGEIPTSYCSGMIDLDTFCYTVYQRSIAQTKTHGNGRMLSINISDEEFKSMYSQKYPQIEIACYNSPQSIVVAGNESILNEISKELKEKEIFTAMLGSLSSFHTSSQQCTKDSILQLNIESKKSKVPTFSTVTTNLFNESDPFNSQYVYDNIINPVKFTQTISNIYKHIESNQLDNDIVFIEIAPHPTLSFYIKQMVPSSLNESVSVYSALHKKKNDVEEFQQTISNLYCQNGYNINFKCQFNNKKSNQKINLPLYQWDDELYFAQTQVLEQHRKEGPPIDHLGLSNSYYSPFKNSYRTFIDIKNKPFQYLKGHMVKGKYYFPGCGYIDNIIQLYKNQDIFISFIEFKTPLILIEGINQCLQTNIQQTGKSEYRAQFHFKDQKSNEWIQSSNANFQLLDHTIEMPPKYNIEEIIKNKCTLARLTKNEIYTHIKSKTGLNYTAMFQGATECYIGVDCTLSVVSIESQTNSFLNIPILDSVFHGNISLINDQCQIVFDKVHGLKYYSSNIPNDYKDKSVYVYAKLKSKTSDSYSASFTVLLSDGTVVYEIDEAFSKSLIPIKELLKIEYPNDELFSINLQPKDSPIPAPSTFKSLIYENDRFNAEPPMVENLFQYISTIFYKNIINRCPEINIDIIKSLSIDEIISNFSKISKHERLFKYVFETIKENGILNSLEEKDDTYFVFNEVLIKSSRVISKLLFPLENDNDNEDTPQLLFQNGLMDKVYKCRYLKNKNQMIAHIIKHSIKEIINNNIIIRILEFGGGTASLSVEVIEEIVTLLQENPNYQVEIEYTWSDISPAFIVDTKNKINKIIKGAGITNGLNVIYHPLTIDESLVELQSIKPSYYDFVIMSNVLHVVKDIKQAVEQMYQLLIPNGQLLFVEPPYKSIICDSLFGSFEQWWAFTDTDIRKDHCCLSQDGWYKLLKWSNFESIEMSTESKFMGSVIQAQKPSFTSLINQQPKYDNIIIFGNNCPNFIDNIKPFSNFNEFIQIETIQEFDQLINKSTITNDSIIYFIKSINQLSLDNYKQATLEYIEINQKLLQINSLCKHVLIVNDSRKTNYLASSIVGAARYFDEFQQLKLHTLDFDYDSTQNYLISKNNKMVQFINNLIDSKTNVHKEMIIINNKVYYEIVQKEKNLKLKYNSESFEQQDNLMCSLSPNLEYQLQSKQIKLRDNQVEVKTIATGINNKDYLVYSGLEGSVNSNTPQFGYEFSGIITRVGNNVKDYKVGDNVFGLSNSCTSSNIIVNHERIQIKPSNISHIEAASIPIDYLTSFMSLFNVGCLNIEDNESILIHLGSDSFGLSTFEILKWKGFKSNLFVTVNSDEIKQYLLNNYGDLITAIYSNTDKGYVSQIKNKLIEQGSNDNGVDLILNTLPSDFMDSNFQLLAINGRIIDLSNDHLNQSEYMKNVNFTLNRGYHNFDLMSQRNSRINRSLLTISKAIENGELKLIPIKEFSNSDINDAIEFIIEENRIDKIVVSHDHEVYQELYAKFSNENDFSILKSNYQINSNNLGKNILITGQSGIILEILKWIIKYSNINTIENVIILSRSSLKWELELLINQTKLSNNNIKFHFKSVDVGDSEQVDNAINEILNENQEIINIHSIFHFAFTQIACKVQEINMKHLDISHGAKTMGAINLHNQSIKRNWKLINFVISSSIASLVGSTDQCSYVCANALLDSFSKYRVSLGLPSTSINLGAIESTGFVSKNESISVFLDGSGIIPTPINQVLGLLDLQIQNPGKFTNSMVAKFNPLNFSNNEQINLLLKMDYIFNLHSNGYTKVKESAGSKNVDELFIKKISDLFSIDESKINKDIRLIDYGADSLVIVQLKNWVDQEIGFNLITIQQLQNNTINVSIKIILNFLKKINK", "length": 2512 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q86KS1-1", "protein_name": "DNA cross-link repair 1 protein", "gene_name": "dclre1", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MSDDEDDINLYITRSKNNENKKTNKNRLIDNNIQKTKTTTAVLTTRTTTTTTTTTASTQLKWDYGDEDDDDYSAPKDIDEEQSSKQFNYQNNQIVVKQDHDDYSAPKDMDEEQSSRQFNYQNDQTLVKQDDDHDDYNEPKDIDSQSLIDEDCDFEFDNSDFFFDDGTTNNNDNNNKNNKNNNNNNNNNNNNNNYNNNNNKNYKRKYYQSYNNSNNINNNNNNNNDKFEKRLSDLKKTGKEEAKKRGYQVRKTPTKEKKIPPSFKVIDGTNFLVDGFQYKSEDFTHYFLTHFHSDHYVGITKTWSFGNIYCTEETGKLVSHKLGVDQRYIVKCEWNKLIEIQGVKVAFLDSNHCPGSALILFIIPLRNKDGEIIGEESILHTGDFRYNQSMNNYPLLKGRTISKLYLDNTYCDPQYVFPPQPEIIKQVASIVRKENDGETLFLFGTYVIGKERILLEIAKQEGKPVHVSNEKYAILCCLSTCLDINKFTTNELITPFRAVTMSMLSYHNMLSLLDSSNNKYKRVIGFRPTGWTQAKKSITYLNRGPTTFYSVAYSEHSSFNELRDCIDHFRPTQIIPTVDCDSPIKVKNILAHFSDLYEKKKQLTIASFFSAQPVTNFFQSFFKSKSEPIIDEDNKKLIPITTTTTTNINTLTATDTTTTKIKTSNTLIKDEFTDDLIWDCSDDLISDRKLLTQSDNSSALCKIEKEENFNDLSENNNNSNNNNNNNNNNNNNNNNNNNNNNNNNKLIIENDIKEEIIDFDDPVFISQQKWIEKQIYNNNNNSNNNNFTTPTKTNGNLSNNAKLNLTPTQTQTQTPTQNNKKQKTTNVSPTSYNSNNSSQQSGLKRSKSDPNVKKNQLQTSQPPSQSLITSFFQKCASPTSLFSATPPTPSITTTSNQSTKNKNSTTTTSTSTSNNKPFKN", "length": 920 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q86KX6-1", "protein_name": "TNF receptor-associated factor family protein DDB_G0272348", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MEFELEDITIEQSSFTNNNSNNNNNNNNNSNSNNNNNNNNNNINNNNNHNNNNKNNSNNKNEINNQLDIPISNLVVDKENISKKYFCTICSDLLVNSFHADKFKAVQCKNGHYTTCLNCWEKHLEKKKNCIQCGVDVESIESLSSNLLVTQKFTTFKIHCPNSFFDTIDFIKDEVNGCKEIIQINELEEHLKECQYGFISCKNCEEFSKLPFQEFTQCPDFRKNTKEQHDLICPYVKISCEYCGDIINKINKESHNANWCQEITIKCLDCHLPFKKKEINQHQKSFCPETIIQCRYSKGGCNAMIRRSKLSQHLTEGDNHHQFISNILNQQDLKINELELKNTEFCLLLNGQNKKITELEILFKELNDSILIQKQQQKQQQQQQQQQQQQQQQQQQQQQSQQQQSQQQQQSQQQQQSQQSQQNNNSNSHFINNNNNNINNVQMSDSPNGGSLPQAVYKNKWVISNYSEQEQQGISKDYIKSPLFKIGNSTFFLKWFPFGKKKLNYCSIFLYKTQDDKSIIVNYYIHLVNNQISDEVYEKRGCQKYDSENGSAGYGSSQFIKRADLLNDANGFLINDSITIEIEIFATEEILPLQS", "length": 595 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q8BI41-1", "protein_name": "Syncytin-B", "gene_name": "Synb", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MTGFWVLCFVLFPSSLSYPESWMPLVNLTHHILRDTNSSLFSNCWVCLSTQTQRSLAVPAPLSIWTDTPMKLHLTYSVRPFSGSFSISDIERRLRLFRPLTASYSFHNPDRRAIAFLQLVSSTGIFRIITRITSVIYPHKDRFFESAQRPLWGPLFTETVLRSQAPLCISRFFKVSAYATFVGNLSASLCNYTMHISPSTSHENLDLSTTHTFKQAMKRPDAKWKNPLRFSGPPSLIFSKPAYYPCPTDIKHCHTSPATPWMHCPQAPFGTCYNLTLFEPDNSTHPVTMSVNPTHFKVKLQGHRDPYPLSHYQPLTGAALSGQYSVWENEITVQENWDITSNIFSHLLSFSYAFCLNSSGVFFLCGTSTYICLPANWSGVCTLVFQYPDIELLPNNQTVPVPLFASVLSSDSVLRPKRSPHLFPFLAGLGISSALGTGIAGLATSTLYFQQLSKVLSETLEEIAASITTLQNQIDSLAGVVLQNRRALDLITAEKGGTCLFLQEECCFYVNQSGIVRDAARKLQERASELGQHSDSWGQWPDLGRWLPWLTPFLGPLLFLFFLLTFGSCLLNCLTRFVSQRLGSFVQDTAKRHVDSILQNFQYKKLPQDSPDEDTIPT", "length": 618 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8BYG0-1", "protein_name": "Tetratricopeptide repeat protein 24", "gene_name": "Ttc24", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLSSRQYGLSDVLRALEESRKLADADRSTDQGLLGPFYNDLGMGYFQLQLFPLAVEAFLQALPLCRQPSEQATVLQNLGMTHNVLGNYWEAQEFHQKAASLHGSVGQRWEQGRSFSGLAFSLSQLGDHRAAWDSYLHALQAAQDTGDVKGQWQACEGLGAAAARLGQHDQALKYYKEALALCQHEPSSVRERLVAKLADAMRTFVAQEKIAQARFLPSAPGKLQTSRKAKTSARVQSSAEDAQESQWEGEASEGGHEKKEMEGLVNTATVLGPQRQNRATTHLPSGGPSPSGEEYPFIIAPKKLRVSRSSTWAKEALGRNFQRTRIQSGLCSIM", "length": 334 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8C1N8-1", "protein_name": "Alpha-defensin 22", "gene_name": "Defa22", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKKLVLLSALVLLAYQVQTDPIQNTDEETNTEEQPGEEDQAVSVSFGGQEGSALHEKLSRDLICLCRKRRCNRGELFYGTCAGPFLRCCRRRR", "length": 93 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8C1P2-1", "protein_name": "Alpha-defensin 21", "gene_name": "Defa21", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKTLVLLSALILLAYQVQTDPIQNTDEETNTEEQPGEDDQAVSVSFGGQEGSALHEKLSRDLICLCRNRRCNRGELFYGTCAGPFLRCCRRRR", "length": 93 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8C5Y2-1", "protein_name": "Mitochondrial sheath formation-associated protein", "gene_name": "Misfa", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MIVLGWMLFVGLATYMGTFPEAMPPTLKWKERLPGQENKARRRIQALEEELLL", "length": 53 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8CDW1-1", "protein_name": "Protein FAM228A", "gene_name": "Fam228a", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MADTKTSKCDEHFSVEKLKEWPEPESVSLMELLAREDIDEAVHAVLFRENYVVKRLDTYLQHLAVFKERRKEMLHKKWVENVVQPLQQRITDKITSYRRPGKNQVKYEHCLKQTNKPTKVSSSCLFQKQQEFREAKGTSYQHGRGKTHDTQKEAKETEKGLSFTPFSLRPHCSSPRERQRASARLMQSKPGGRNRYKGASSEKPVFTLKSHLPKEEKTVSRSQLVFERQFRASRLSQDIKEAEKKGLVVGTGPQRPRSWAAADSVPRPSLVGRRVMTAEILGEHLVSLHQAARSGLQWP", "length": 299 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8CEK3-1", "protein_name": "Serine protease inhibitor kazal-like protein, minor form", "gene_name": "Spinkl", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSSTWIKFLFILTLVLLPYSVFSVNIFAGPENVIKEPNCTMYKSKSECSNIAENPVCADDRNTYYNECYFCIEKVVEKLKYRYHGICIYK", "length": 90 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8IZP1-1", "protein_name": "TBC1 domain family member 3", "gene_name": "TBC1D3", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MDVVEVAGSWWAQEREDIIMKYEKGHRAGLPEDKGPKPFRSYNNNVDHLGIVHETELPPLTAREAKQIRREISRKSKWVDMLGDWEKYKSSRKLIDRAYKGMPMNIRGPMWSVLLNTEEMKLKNPGRYQIMKEKGKRSSEHIQRIDRDVSGTLRKHIFFRDRYGTKQRELLHILLAYEEYNPEVGYCRDLSHIAALFLLYLPEEDAFWALVQLLASERHSLQGFHSPNGGTVQGLQDQQEHVVATSQPKTMGHQDKKDLCGQCSPLGCLIRILIDGISLGLTLRLWDVYLVEGEQALMPITRIAFKVQQKRLTKTSRCGPWARFCNRFVDTWARDEDTVLKHLRASMKKLTRKKGDLPPPAKPEQGSSASRPVPASRGGKTLCKGDRQAPPGPPARFPRPIWSASPPRAPRSSTPCPGGAVREDTYPVGTQGVPSPALAQGGPQGSWRFLQWNSMPRLPTDLDVEGPWFRHYDFRQSCWVRAISQEDQLAPCWQAEHPAERVRSAFAAPSTDSDQGTPFRARDEQQCAPTSGPCLCGLHLESSQFPPGF", "length": 549 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q8K072-1", "protein_name": "Receptor expression-enhancing protein 4", "gene_name": "Reep4", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MVSWMICRLVVLIFGMLYPAYASYKAVKSKNIREYVRWMMYWIVFAIFMAAETFTDIFISWFPFYYEFKMAFVLWLLSPYTKGASLLYRKFVHPSLSRHEKEIDACIVQAKERSYETMLSFGKRSLNIAASAAVQAATKSQGALAGRLRSFSMQDLRSIPDTPVPTYQDPLYLEDQVPRRRPPIGYRPGGLQGSDTEDECWSDNEIVPQPPVRPREKPLGRSQSLRVVKRKPLTREGTSRSLKVRTRKKAMPSDMDS", "length": 257 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8MP30-1", "protein_name": "Uncharacterized histidine-rich protein DDB_G0274557", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MEIKYFLVLLVGFLLVLPSIVNPYRKGVTITNQQPKINIYQLDVNNPHNPNNNPHNPHNPNNNPHHPHHLHHHHHHHHHHHHHHHHHHHHHHHHHHPHHPHHHPHHHHHPHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHPHHHPHPHPHPHPHPHLHPNPHPHPHPHPHPHPHPHHHPNPNPHPHPHPHPHHHHHHQEASECLSYQGNRNRLFIKRDY", "length": 233 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q8NG83-1", "protein_name": "Olfactory receptor 2M3", "gene_name": "OR2M3", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MARENSTFNSDFILLGIFNHSPTHTFLFFLVLAIFSVAFMGNSVMVLLIYLDTQLHTPMYLLLSQLSLMDLMLICTTVPKMAFNYLSGSKSISMAGCATQIFFYTSLLGSECFLLAVMAYDRYTAICHPLRYTNLMSPKICGLMTAFSWILGSTDGIIDVVATFSFSYCGSREIAHFFCDFPSLLILSCSDTSIFEKILFICCIVMIVFPVAIIIASYARVILAVIHMGSGEGRRKAFTTCSSHLLVVGMYYGAALFMYIRPTSDRSPTQDKMVSVFYTILTPMLNPLIYSLRNKEVTRAFMKILGKGKSGE", "length": 312 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q8NGV6-1", "protein_name": "Olfactory receptor 5H6", "gene_name": "OR5H6", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MFLYLCFIFQRTCSEEMEEENATLLTEFVLTGFLHQPDCKIPLFLAFLVIYLITIMGNLGLIVLIWKDPHLHIPMYLFLGSLAFVDASLSSTVTPKMLINFLAKSKMISLSECMVQFFSLVTTVTTECFLLATMAYDRYVAICKALLYPVIMTNELCIQLLVLSFIGGLLHALIHEAFSFRLTFCNSNIIQHFYCDIIPLLKISCTDSSINFLMVFIFAGSVQVFTIGTILISYTIILFTILEKKSIKGIRKAVSTCGAHLLSVSLYYGPLTFKYLGSASPQADDQDMMESLFYTVIVPLLNPMIYSLRNKQVIASFTKMFKSNV", "length": 325 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q8R264-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r215", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MNWNNIIHTIIFLSLTGPGIVGNMLIFIRHIYMPALGTEKKPVDLIVIHLAFSNMITICTTGIKDIATVFYFRNFLGDIGCKAVVFLARMARGLSICTTCLLSVVQAITISPRTSLWTKLKPQTACQIIPFILVFWIFNGLISSNLLSYIKGGSSLNRSVAATFIGHCYMLQSRHTIKWIFLSLMTLRDVIFQSLMGWSSGSMALNLYKHHKRVLYLYSSRFANNSPPEIRATWSVLILMTCFLLFYWADFILSFYHGFTVTHESILLNIKVFLELGYVSFSPYVLISRYIHPPNVFHAH", "length": 300 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8R272-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r220", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MVLQFIKKTIFLFMTMVGILGNMSVSVHYMFSWWGSPEKKPIHLILTHLTFTNIILLLAKGLQKTIIVFGLRNFLDDIGCKIIVYLERVARGLSICTSSVLTVVQAIIISPRASGWRRLRPKSAWHILPFFSFFWILNAFISVNLIHSIRSKGMNTSQHKNSDDYCYLTPESQKIKWIVLPLMVLRDAVFQGAMGGASGYMVFLLHKHHQHVLYLQNSKLLYRTPPELRAAQSVLLLMLCFLFFYWTDCALSLFLSLSLGDSSLMINIQGFLTLGYAIFSPFVLIQRDGLIPVCWHAQ", "length": 298 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8R278-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r213", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLALRNYIQINTPWCMCLFVTPLTPCLPEYWDPDSLRVEGPTESSLRHNTASCTLKNTIMQNVQFRSMSSITDAFFKMYLHTRKEEMILKILKEITFLIMTVLGILGNMSVSVNYMFSWWGSPEKKPIHLILIHLIFTNIIILLVKGLPKTIAAFGLRNFLDDIGCKIIVYMERLARGLSICTSSLLTVVQAIIISPRASGWRRLRLKSAWHILLFFLFFWILNALISVNLIHSTTNTRLNVSQLKSDDNYCYFMLPIQKIKWIVLPLMVVRDAVFQGAMGGASGYVAFLLHKHHQHVLYFQNSKLLYRTPPELRAAQSVLLLMLCFVFFYWTDCAFSLFLTLSSEVNILMVNTRDFLTLGYATFSPFVLIHRDGLLVECRHVQ", "length": 384 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8R2A9-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r229", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDFGNLAMGIVLSLQSALGILGNFSLLFYYLVLYNKERTLKIIDIILIHVFTSNSLIIFSKGLPEVLAVFGWNDLFDDVGCKLIMYVRRVSRSMSISMTCLLSVFQAITISTRNSCWKEFKEQTAKFMGLFISLCWILFMLVNMLFPVYTSTNRNSKNKTQKKDIEFCHSVGRDKMVDIMYTAFCVFPEVLFSLLIVSSSTTMIVILYGHKKRVQHILHTHASPRTSAENRATQTILILVCTFLAFYTLSSVLQGYVALSHDPSWWVMNITTIISMGFPAIGPFVMSRDFTVSRFCFTCIGNLKLP", "length": 306 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8R2B6-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r178", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSAHDKSLKTTDDMTLQILLLCQFVVGTVANVFLFLHNISPVLTGSKQRPRQLILSHMSVANALILFLTSFPDMMAFAPRNSPTHLKCKLEYFSRLVARSTNMCSTCVLSIHQFVTLVPVNRGKAILRASVPNLTSYSCYSCWFFSVLSNIYIAIKVTGPQITDNNTDSKSKLFCFTSGFSVGIFFLRIFHDGTFMSIMVWTSVSMVLLLHRHRQRMQHILTPNQDARGQAETRATHTILMLVVTFVSFYLLNFICIIFYTFSIDSRLFMSHFSKVFAAGFPTISPLLLIFRDPKYPCSVLFNC", "length": 304 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8R2B8-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r64", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLSQNKTLKTMEVLALQILLLCQVVVGTVGNIFLFVHNFSPVLTDSRLRPIQVILINLAVANAFMLLLFAYSYDLIDFVPRKPPTDLKCKLAYFFNMVAQGTIMCSTCLLSTYQFVTLVPGNWARVMFREISPKVVSYCCYSCWLFSVLNNAYMPMYVSGPQKTHNDSDSKDNWICSISGVSVDMNFLRFSHDIIFIGIMAWTSVSMVIHLNRHHHRMHYLHNPNQINRGHAETKAAHTIMMLVVTFVSLYILDCICSLFHISFVESRLWLIDVIELLHLSFPTVSPFLLICRDPMGPCSLLFIVGLEIHVTVGAITEEQ", "length": 320 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8R2B9-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r59", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEMLALQILLLCQVVVGTVGNILLFVHNFSPVLTDSRLRPIQVILINLAVANAFMLLLLTYSHDMIDFVPRKPPTDLKCKLAYFFHMVAQGTIMCSTCVLSTYQFVTVVPGTWARVMFREISPKVVSYSCFSCWLFSVLHNAYIPMNVSGPQKTHNDSDSKGNSICSISGVNVDMHFLRFSHDIIFLGIMAWTSVSMMIHLNRHHQRMNRIHKVNQNNRGHAETRAAHTILMLVVTFVSLYILNCISILFHISFVESRLWSRHVIKVLALSFPTISPLLLIFRDPRGHCSLLFSVGLEIHVTGGVITEEQ", "length": 310 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8R2C0-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r62", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEVLALQILLLCHVVVGTVGNILLFVHNFSPILTDSRLRPIQVILINLAVANAFMLLLFAYSYDLTDIVPRKPPTDLKCKLAYFFHLVARGTIMCSTCVLSTYQFVTLVPGTWARVMFSEISPKVVSYCCYSCWLFSVLNNAYMLMNVSGPQKSHNDSDSKSNSICSISGVSVDMNILRFSHDIIFLSIMAWTSVSMVIHLHRHHQRMNHIHKVNQNNRGHAETRAAHTILMLVVTFVSLYILNCISILFYISFVESRLWLRYVTKLLALSFPTISPLLLIFRDSKGHCSLHIMSVWKST", "length": 300 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8R4R9-1", "protein_name": "Protein phosphatase 1 regulatory subunit 14C", "gene_name": "Ppp1r14c", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSVVTGGGEAAGGTSGGGARVFFQSPRGGTGGSRESSSHSGSSREDSAPVATVAAAGQVQQQQRRHQQGKVTVKYDRKELRKRLVLEEWIVEQLGQLYGCEEEEMPDVEIDIDDLLDADSEEERASKLQEALVDCYKPTEEFIRELLSRIRGMRKLSPPQKKSV", "length": 164 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q8R4V1-1", "protein_name": "NFAT activation molecule 1", "gene_name": "Nfam1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MESWLLRRGARVRCLHPPSWLPAWCFLCLLPVPQTLQLTGLVSLTHTSLPIMVSLANTDVFFSCRIEDFTRLQRDLPVKLFHTDIHGRRRWEKQINCQHRPGMENHTRDCMVKLSQANTSATGIYYFIVEGEETYQSDGVVILVRDTVYQPPAFKVQEALMLGFTSLMSVLGVLGTALLLWKKKQISVLGKHTAKTCSGLKSTVGTTKPPAESVYTSLQRRETEVYACMKEETGSPVFSQSPATKEKLNRFEDDNEFNLVYENL", "length": 264 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8T277-1", "protein_name": "5'-AMP-activated protein kinase subunit gamma", "gene_name": "prkag", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MWYPGDEDEEFTSIIENIEKKETQEIKIKTEKLRQASLNQLPIEQSEGVGGGELSEYNNNTTNNNTPTNTTTTTNTNTTTMNNSNNNNERILSTSNGFDIRLPPNSIEQPSPSFISSSQDGVLTVDPLAVDGEKGNKESQSPPNGDNQILNNNNMFFKDITSLPSTDNKSSTNTNNNNNENPLKQTISSSPSKSTTTTTTSTSTTTTPSLSSLSSNNNNNSNSNNNYINHSSISTVSEGLENLNLKSGIKKIDSETEKYIEEGKQVFVNFLKGHTCYDVIPISGKVVVLDTKLAVKSAFYALEENGIKSAPLWNSEQHDFTGMITVSDFIDILLYYYKKPKSNNIFQDMGIHRIETFWREISVERPSSLISTEPETNLYDAASLLLCYKIHRLPVVDKKDTNSILHILTHSRILAFMMKSFPQLPEKLLSIPIGSLGIGTFATVVTVMTHTPLVEVLELLSEKKISAVPIIDSETSKIVDVYSKSDVTLMSKQGILSPSDLNLPVHQVLSTFTKLWQRPEQIYTCTRFDKLGDVIERCIKKRVHRLVCIDSSKKVEGILSLSDILNYLLNDVKSINH", "length": 577 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q8VEU4-1", "protein_name": "Olfactory receptor", "gene_name": "Or14j2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MIVENITTMRGFLLMGFSDNHELQILQALLFLVTYLLGSAGNVIIITITTLDPQLQSPMYYFLKHLSILDLSSLSVTVPQYVDICLTQSGYISYAQCMLQIFFFTGFAWGEVAILTVMSYDRYVAVCLPLHYEVIMGPSKCRWAVTAVWLSSVIPGTLYIASIFSIRFCGDRIIHQFFCDVPQVLKFSCSDDYLVTVGVADFLSAVAFACFIGIVNSYVHIFSTVLRMPSAESRSKVFSTCLPHLFVVLLFLSTGIFAYLNPTSDSPTALQFLVSIFYTVLPPTLNPVIYSLRNETIKSVIRKLLLSSKFTG", "length": 312 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8VFX0-1", "protein_name": "Olfactory receptor", "gene_name": "Or5b101", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MENRTEVRCFILVGLTNDPSLQLPLSITFLLIYIITLIGNLGLILMILLDSRLHTPMYIFLGNLSLVDFCYSSTVTPKVIAGFLTGDKIMSYNACASQMFFFANFGDVENYLLASMAYDRYVAVCKPLHYATTMTTHMCASLVIGCYICGFLSASIYTMDALSLSFCESNVIHHFFCDVLAVMIVSCSDSHVNELILIYVVSFNMFFALIIILISYMFIFTNILKIHSSAGYHKAVSTCASHFTAVSIFYGTIIFMYLQPSSSHTMDTDKIASVFYTMVICMLNPLVYSLRSKDVKSAFTKIVLRSK", "length": 307 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8VY69-1", "protein_name": "Vesicle-associated membrane protein 723", "gene_name": "VAMP723", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MAQQSLFYSFIARGTVILVEFTDFKGNFTSVAAQYLENLPSSNNKFTYNCDGHTFNDLVENGFTYCVVAVDSAGREIPMAFLERVKEDFYKRYGGEKAATDQANSLNKEFGSNLKEHMQYCMDHPDEISNLAKAKAQVSEVKSLMMENIEKVLARGVICEMLGSSESQPQAFYIKRTQMKRKKWFQNMKIKLIVLAIIIALILIIILSVCGGFNCGK", "length": 217 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8VZ67-1", "protein_name": "Uncharacterized zinc finger CCHC domain-containing protein At4g19190", "gene_name": "", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MDGEGEGSGIRLSKRFAGGKVTGGSLEVDYKTKSGTAWSHSFLNQKPWHPLSYPNQRRKWIAEQTHAQHDRRAEEVAREFAQEQEFFKQAALISKKEREKIETMKAVSFMYVRPPGYDPESAKAAEYKDEKHKGQGSSTQDPVADDNVGSRPEESQGGGERTQERKKPRPKDVFGRALPTEEEFEVLKNAPRMETGIPGRVKPFAVEVRNVKCLRCGNFGHQSGDRDCPLKDAVMPNEELRLKRDDPLTAIIAHTDPSEPLKWELKQKPGLSPPRGGFDPDDPNQQIVAEDIFDEYGGFLEGSIPIEILKSMSSDKKRKSKKNKRHKKHSSRTVEETDESSTGSEDSREKRGSKKRKKLKKKSKKQYDSDSLSFEGSGSDSYRLSRRRHTKHVDPSASLKSEVYHQGNSHREKHYYDEKHQKRKEIVDRPSASSDDSDYYRSNSSRKKRSEDDYKSHHRERKQVHSNDPVSEKSQKQHYSESGKIQRVEKEHRYDERRHRYVDMESENRNRSEKKPRYDDRDSEKHHRSVKGKEKHVYEASDDPEEFSDRYRSTKKTESDSESNRRSRKKKHELSSEEEEGESRKHRYSTNRRRN", "length": 595 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q91V82-1", "protein_name": "Beta-defensin 8", "gene_name": "Defb8", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MRIHYLLFTFLLVLLSPLAAFSQKINEPVSCIRNGGICQYRCIGLRHKIGTCGSPFKCCK", "length": 60 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q923B3-1", "protein_name": "Neurotrophin receptor-interacting factor 1", "gene_name": "Nrif1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MASTLPTTWPHESVKFEDVSLTFTEEEWAQLDFQQKCLYREIMMENYSNMISVEHHFSKPNVISQLEKAEDCWPMQREIPQDTLPECSWPSPDPGMNSFPSKSPLMKIEVVEVLTLNKDVAGPRNALIQSLYPEDLNPGNLKPAQQPSKRLTDTEASRQKFRHFQYEESAGPQKAMSQLRKLCHQWLQPNTRSKKQILELLVLEQFLNALPEKFRVWVESQHPEDCKAVVALLENMTSVSKDDASLACSSEATDQLKEKRKGVATLPVTFAAEVPAEEPVTFQDVAVDFNEEEWRLLGPTQKTEYHDVMLETLGNLVSVGWEPTLGNRELTPDSPIPVVKPIHDPNTNDLSRNGTQSTVFESILEDGVKEMHSIESNQVGNLQEKGHPQKKFSESSKSQDQTSRHKSQGSLNEVLPRKYVKVKQKGTGKRKGRTNTISMTRGLRIRKQQKDSVEWQGRSGSTPVTHGSSIKKQQQGSEQGKPGTSRDPITLTVPAKVYQKATGSEESIFMDSSDAMVPDVPPKIHQKGPEWHKVGESNNSMLQGSSVQNHQMESGAGRASDNSLLTHALPVKSHQKGYKEGNVQGNRNSWKHIKPHQKGSKGERVEELSTSEKHVPYVKNHLKTSERGKDREINASIKCDPYIKTYYRGSDVGRLRRANNCRKAFSLHAQQISFIKIHKGSQVCRCSECGKLFRNARYFSVHKKIHTGERPYMCMACGKAFVQSSSLTQHLRIHSGERPFECSECGRTFNDRSAISQHLRTHTGAKPYHCERCGKAFRQSSHLTRHERTHTGERPYVCIKCGKAFTQSSHLIGHQKTHGIKFKKQPKL", "length": 828 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q924S2-1", "protein_name": "Inactive 2'-5' oligoadenylate synthetase 1C", "gene_name": "Oas1c", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MENGLCSIQARELDEFICDYLFPDTTFLTELRADIDSISAFLKERCFQGAAHPVRVSRVVMGGSYDEHTALKGKSEAKMVLFFNNLTSFEEQLKRRGEFVEEIQKHLCQLQQEKPFKVKFEVQSSEEPNSRSLSFKLSSPELQQEVEFDVQPAYDVLYELRNNTYAEPQFYNKVYAQLIHECTTLEKEGDFSICFTDLHQNFMRYRAPKLWNLIRLVKHWYQLCKEKLREPLPPQYALELLTVYVWEHSNKNQEKVTTAKNFRTFLELVAYYKNLRIYWTWYYDFRHQEVCAYLCRQLKKARPLILDPADPTRNVAGSDLQAWDLLAKEAQTWMQSSCFRNCDMSFVPTWDLSPERQECAFQ", "length": 362 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q925U0-1", "protein_name": "Oocyte-secreted protein 1", "gene_name": "Oosp1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKPFVGLLGLLLLLSFMKTCADDWTAISLQCADHWFHLRIRPTIFHNIFMEPDEVFLGIGCPVTTTWPNDTYEFIYRTYSCGIANKVLCDVTLLKTQLTYISKNASLQAEMSLSCVMHNQSPHFCEAESRGDFTGDPPGWTEDMRARRDEQTVPMVQPNLSTSSEDHHVSTEPWASETSRSEAAEVPSFMDQNFSVFHFSRM", "length": 202 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q94490-1", "protein_name": "Ubiquitin conjugating enzyme E2 B", "gene_name": "ubcB", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MAAHKRLQKEITDMLKTPPSWCSAHLVDDNLQKWKATVQGPEGSPFEKGVFSMDIDIPADYPFKPPTLKFTTKIYHPNIKTSDGAICAEVFSTWSPQLKILDVLTTIRSILTDPNPDNPLETEIAQQFKTDRNAFNKTAKEWTKKYAK", "length": 148 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q945S5-1", "protein_name": "Vacuolar cation/proton exchanger 4", "gene_name": "CAX4", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MSSISTESSSNLSLLENGGGGSDKPTAETSRRVRRTVSASSLIRKRSDLKLISRVRWEFMRRILTNLQEVLLGTKLFILFPAVPLAVVAHRYDCPRAWVFALSLLGLTPLAERISFLTEQIAFHTGPTVGGLMNATCGNATEMIIAILAVGQRKMRIVKLSLLGSILSNLLFVLGTSLFLGGISNLRKHQSFDPRQGDMNSMLLYLALLCQTLPMIMRFTMEAEEYDGSDVVVLSRASSFVMLIAYLAFLIFHLFSSHLSPPPPPLPQREDVHDDDVSDKEEEGAVIGMWSAIFWLIIMTLLVALLSDYLVSTIQDAADSWGLSVGFIGIILLPIVGNAAEHAGAVIFAFRNKLDITLGIALGSATQIALFVVPVTVLVAWTMGIEMDLNFNLLETACFALSILVTSLVLQDGTSNYMKGLVLLLCYVVIAACFFVSNSPSSKLLF", "length": 446 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q96AK3-1", "protein_name": "DNA dC->dU-editing enzyme APOBEC-3D", "gene_name": "APOBEC3D", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MNPQIRNPMERMYRDTFYDNFENEPILYGRSYTWLCYEVKIKRGRSNLLWDTGVFRGPVLPKRQSNHRQEVYFRFENHAEMCFLSWFCGNRLPANRRFQITWFVSWNPCLPCVVKVTKFLAEHPNVTLTISAARLYYYRDRDWRWVLLRLHKAGARVKIMDYEDFAYCWENFVCNEGQPFMPWYKFDDNYASLHRTLKEILRNPMEAMYPHIFYFHFKNLLKACGRNESWLCFTMEVTKHHSAVFRKRGVFRNQVDPETHCHAERCFLSWFCDDILSPNTNYEVTWYTSWSPCPECAGEVAEFLARHSNVNLTIFTARLCYFWDTDYQEGLCSLSQEGASVKIMGYKDFVSCWKNFVYSDDEPFKPWKGLQTNFRLLKRRLREILQ", "length": 386 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q99N64-1", "protein_name": "Germ cell-less protein-like 2", "gene_name": "Gmcl2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGRTWCLHKVFLCQSGYFANILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9C7P4-1", "protein_name": "Putative zinc finger CCCH domain-containing protein 9", "gene_name": "", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MADAGDNQQEAERRSDETESRSIKEPKEKEDEDENPQDQIQSKERMRQSSPYPVRPGKKDCQFYLKNGLCRYRSSCRFNHPTQRPQELPVRICKHIMDRNVAEPMYQDWRESESERRFDERTQRTFGDERTQRRYGIEYSGARPEKRSKIVPDFQMRDPRHHDTEWRFERERMERIERQRREAEENLQEQRQRDSIERQRREAEENLQEQRQRDSIERQRREAQENLQQQRQRDSIERQRREAQENLQQQRLQDMPENHNVDDQQNLQEQRRISIEKERTEARLRLEQIRPTVSFPINEFIRAVVLLRELIENWDDKAWKK", "length": 321 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C8M4-1", "protein_name": "DNA-directed RNA polymerase subunit 12-like protein", "gene_name": "NRPB12L", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MDLQQSETDDKQPEQLVIYVCGDCGQENILKRGDVFQCRDCGFRILYKKRILDKKETRIGV", "length": 61 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9CQK8-1", "protein_name": "Small proline-rich protein 2A1", "gene_name": "Sprr2a1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSYYQQQCNQPCRPPPVCPPPKCPEPCPPQVWPGPCRPVMCFEPCLPSVWPGPCRPVVCYEQCPPQPWQSTCPPVQFPPCQQK", "length": 83 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9CWP4-1", "protein_name": "Lymphocyte antigen 6K", "gene_name": "Ly6k", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAFLVALLVVLGLQLVQSNALTCHVCEAQNSYACSNPSQCPGEKKFCLLAVTRIFERFFYVSKQCTRRCPTPVVSPPSTNPPSEPKEFLIEKPMPFLFYKCCQWDSCNGEGPPTDQLLKEQPGKASGRRHRYIELLLTGFMVLTANGLSALCLL", "length": 154 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9D541-1", "protein_name": "Coiled-coil domain-containing protein 7A", "gene_name": "Ccdc7a", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKCAKHPSTISMKLTSVPELPYKKGLLNSSPKPKEKHNAKSKYGKNESMVLRSPPTGESIVRFALPIPLSKTKDKISADEMVRRITTNLKMVVSNLEDTYGACYDNGEKAAEKSEAEGLSIGDDVSSFLLCCSQFTSQLEEAVKEECGALESLYKWFQQQVNQMEEISKDQSNLEELQSDGKTASLNIVQIAKLARKFEDFKSRLKTRKEVMQTKNEDKEIMAETLKHYGLMEKQIEEFITSHSALESQTETESQSGTPSVTTRMARMIKIFENQSTMLEKALNDQQTIESKYKQLETDFQMLIMEKTLLEAEIRRLREIERVKSAAKEEQTKKSGKSEKKKFKEKEKNLSPNREFKSIEELLQIQKEAELLKTEKKTLQGQLKWALEEAERNKTQLEFVLHQKMEMFKEESKTKVGQSQNKSKVKIEDSKDSLPKKSDTQLGGQRKDQISSDQSKRPKKKQLADIDPSAVEDFPPETFKSFTVMPLIEEHRESISSQPKEEMAKASEQSEAEDIEGPLEIPSESSNEDDDLLPEDESPMMEQVTDVGRYKSIYISAEPIDTMSLISRTQSEMETLEAINYDNVLNEGEEQDKKIGKDSDTGRKSKRKRSSKIRKLSTHEEESDIVHYEEATKAKVPSKKRASDPYGDEAYESRGSVSKAQTYTKKQGTHQRGRGSASDAYGDEAYESRGSISKAQTYTRKQGTHQRGRGSVQEEESDTVHYEEVTRAKVPSKKQASDPYGDEAYESQGSVSKAHTHTKKQGTHQRGRGSVHEEESDTMNYEVPRKSKISSRRKGFALPITHQVEMHSSESQGSISKSNTETKKQGTHKRGRDSDADGARTPVSQGSDSKADTERKKHRSKEESTISKDSIPVLDEVQDKTFEHQESGLRLEVQAKKLTFSSQNIHNEESATDIKVEYQNVPSSSQVQLKKQKPLGGEIFTTHFVVPAESHAQLYQTHTPETQIERGTTSGTARLTTIPVEHPKKEASPDNLFPEKKLYITRAPTQTKKQYPPWDAKAETQKKTVKEVQGISEPQTKLNPTMSGIILHLDMDRVVETDLENLEETIVPHVLRSELEIGTDAKNMPETPTSREAVRTEAKGNQDVTISIAKGMKLIGKLKDQHGLSSFASKDTISPGKSLIKSSRDNQDDSLLETKPQENTSDKYHPSKTFPTKVINMLPFSEKSLGSTSANVDVAPKPVYRASRGRSRISKALQQLLKTSEHLKPTSTKNQNADLEKHLYISVRSANKHTQKDKKHGQSNNQKLKKQGALSSTKKQKHKEQPKTETIVENNDKFDDNLMMTTSSPNIKIIKELSKTLNLDGGDIELSDFVFKTASAAKKLENKGPSKTKNLNKESSRDIHILHLTTSAIRTLLLDEEAKIRSLEKKLMKQSTILQKSVSSMKKFMFEEPSRETKMKRKKREKRKIVVKSPHILPITTTQKHTIKEKSEISNLEKPIVRGTDILKKSTSARKKRVLKGKSKSATLPKKCDNFPFDLVRSSSDSSKQEVEEQPKPGNVDKKVSDDSYSPDISTTPTKKHTLKGQSKSRTIYEKGVDLPNNLVLSKSASSIQEFEEQPQPGNVDKKVSDDSYSPDISTSPTKKHTLKGQPKSENSDEKGIKRPNNLHMSASVARKRLLKALSTIP", "length": 1642 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9D5R2-1", "protein_name": "WD repeat-containing protein 20", "gene_name": "Wdr20", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MATEGRGKETNEIKTHFTTREGLYRLLPHSEYSRPNRVPFNSQGSNPVRVSFVNLNDQTGNGNRLCFSVGRELYVYIYKGVRKAADLSKPIDKRIYKGTQPTCHDFNHLTATAESVSLLVGFSAGQVQLIDPIKKETSKLFNEERLIDKSRVTCVKWVPGSDSLFLVAHSSGNMYSYNVEHTYGTTAPHYQLLKQGESFAVHNCKSKSTRDLKWTVGEGALNEFAFSPDGKFLACVSQDGFLRVFNFDSAELHGTMKSYFGGLLCLCWSPDGKYIVTGGEDDLVTVWSFLDCRVIARGRGHKSWVSVVAFDPYTTSVEESDPMEFSDSDKNFQDLLHFGRDRANSTQSRLSKQNSTDSRPVSVTYRFGSVGQDTQLCLWDLTEDILFPHQPLSRARAHANVMNATGLPAGSNGSAVTTPGNSVPPPLPRSNSLPHSAVSNAASKGSVMDGAITSGVSKFALLSLHDRKERHHEKDRKRNHSMGHISSKSSDKLNLVNKAKTDPAKTLGTSLCPRMEDVPLLEPLICKKIAHERLTVLVFLEDCIVTACQEGFICTWARPGKVSKFQP", "length": 567 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9DAF8-1", "protein_name": "Uncharacterized protein C4orf51 homolog", "gene_name": "", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MTHFLYLTPEILLPFSPLTSTEFELIRRKAQQLWQDETRWSASSMTTYSGSYREKQLDEATCNRLAQRVGQPQFEYKPTPLPGSSAYNTLPGHAGSQEAADGKGRLPDIASPSRDSPLNIKHKVAHQIWGSEVPCPTFLAYRGLRMSPCMQPKKPGFELLMSYRNRGKALLKRLQRQWDYESKLGSSEDSGTDRFSSNTSGSSGRKFK", "length": 208 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9EPV9-1", "protein_name": "Beta-defensin 5", "gene_name": "Defb5", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKIHYLLFAFLLVLLSPLAGVFSKTINNPVSCCMIGGICRYLCKGNILQNGSCGVTSLNCCKRK", "length": 64 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9EPX4-1", "protein_name": "P2Y purinoceptor 12", "gene_name": "P2ry12", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MEVPGANATSANTTSIPGTSTLCSRDYKITQVLFPLLYTVLFFAGLITNSLAMRIFFQIRSKSNFIIFLKNTVISDLLMILTFPFKILSDAKLGAGHLRTLVCQVTSVTFYFTMYISISFLGLITIDRYLKTTRPFKTSSPSNLLGAKILSVAIWAFMFLLSLPNMILTNRRPKDKDITKCSFLKSEFGLVWHEIVNYICQVIFWINFLIVIVCYSLITKELYRSYVRTRGSAKAPKKRVNIKVFIIIAVFFICFVPFHFARIPYTLSQTRAVFDCNAENTLFYVKESTLWLTSLNACLDPFIYFFLCKSFRNSLMSMLRCSTSGANKKKGQEGGDPSEETPM", "length": 343 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q9ER80-1", "protein_name": "Receptor-transporting protein 4", "gene_name": "Rtp4", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLFPDDFSTWEQTFQELMQEEKPGAKWSLHLDKNIVPDGAALGWRQHQQTVLGRFQCSRCCRSWTSAQVMILCHMYPDTLKSQGQARMRIFGQKCQKCFGCQFETPKFSTEIIKRILNNLVNYILQRYYGHRKIALTSNASLGEKVTLDGPHDTRNCEACSLNSHGRCALAHKVKPPRSPSPLPKSSSPSKSCPPPPQTRNTDFGNKTFQDFGNRTFQGCREPPQREIEPPLFLFLSIAAFALFSLFTR", "length": 249 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9FFP9-1", "protein_name": "Serine/threonine-protein kinase SRK2H", "gene_name": "SRK2H", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MDKYEVVKDLGAGNFGVARLLRHKETKELVAMKYIERGRKIDENVAREIINHRSLRHPNIIRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEAEARYFFQQLICGVDYCHSLQICHRDLKLENTLLDGSPAPLLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYDGKHADVWSCGVTLYVMLVGGYPFEDPDDPRNFRKTIQRIMAVQYKIPDYVHISQECRHLLSRIFVTNSAKRITLKEIKKHPWYLKNLPKELTEPAQAAYYKRETPSFSLQSVEDIMKIVGEARNPAPSSNAVKGFDDDEEDVEDEVEEEEEEEEEEEEEEEEEEDEYEKHVKEAHSCQEPPKA", "length": 360 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FLZ3-1", "protein_name": "SNF1-related protein kinase catalytic subunit alpha KIN12", "gene_name": "KIN12", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MDGSSEKTTNKLVSILPNYRIGKTLGHGSFAKVKLALHVATGHKVAIKILNRSKIKNMGIEIKVQREIKILRFLMHPHIIRQYEVIETPNDIYVVMEYVKSGELFDYIVEKGKLQEDEARHLFQQIISGVEYCHRNMIVHRDLKPENVLLDSQCNIKIVDFGLSNVMHDGHFLKTSCGSPNYAAPEVISGKPYGPDVDIWSCGVILYALLCGTLPFDDENIPNVFEKIKRGMYTLPNHLSHFARDLIPRMLMVDPTMRISITEIRQHPWFNNHLPLYLSIPPLDTIDQAKKIEEEIIQNVVNIGFDRNHVVDSLANRIQNEATVAYHLILDNRNQNSVPNDPFQSKFKEISDGIFNSTLPVQNITSHVGHSFSALYGLKSNVKDDKTWTLGLQSQGSPYDIMTEIFKALQNLKICWKKIGLYNIKCRWVRSFAYYKNHTIEDECAIILPTVIKFEIQLYKVREGKYLLDILRIDGPQFIFFDLCVAFLRELGVL", "length": 494 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FVV4-1", "protein_name": "DEAD-box ATP-dependent RNA helicase 55", "gene_name": "RH55", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MDSSPPNTIIEEAPPRFSELKPPLSEDIIEALDRSGFEVCTPVQAETIPFLCSHKDVVVDAATGSGKTLAFLLPFIEIIRRSNSYPPKPHQVMGVIISPTRELSAQIHKVARAVRLDFAKCREVEADMNTLEEEGANLLIGTPGRLSDMMKRMEFLDFRNLEILILDEADRLLDMGFQKQVNYIISRLPKQRRTGLFSATQTQAVADLAKAGLRNPYLKCEADQKSSQLVHLLIENKNKKLVVFFMTCACVDYWGLVISKIPSLKSISFFPTHGKMDQKGRDTALASFTEASSGVLLCTDVAARGLDIPGIVYIRSLAIKDREVLEKGLKAFVSFVRAYKEHQCSYIFSWKGLEIGKLAMGYGILSFPYISEVKQDRIGIVGFTPVQGITFEDIKFKNKSREKQRQQNLLARKDKLQQEKRGKRKKSSKEAVDDSNKASRKRKLTGRQRQTIQTAQDEEEMNLRL", "length": 465 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9JI02-1", "protein_name": "Secretoglobin family 2B member 20", "gene_name": "Scgb2b20", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKGTLLLLGLLVTGELSFQTTEACLPFFEGYASVLSGSRVWLYQELQAFNATAEEKVALEKIQDCFSEERIRNILLEPKIMEAMVASPECLSYYGLDNIRSILDYISKLLGE", "length": 112 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9JJQ7-1", "protein_name": "X-linked lymphocyte-regulated 4B", "gene_name": "Xlr4b", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MASKIKGRPPKQPKVTPALPSNDSQQLHENNPGNNLALETCGESSSSHGTGGPKPGPSKKTLNERKRKYGVSVNKTVQNIEWNVDHFLKVQHERRQELYKDYSHQFLTLVMMWNIDVDQIKKQAGKLSDILDEQQKLFQQFQSIHMQKIEEFKELCDRHLKNLQAIKCCRRKAIIEEARKLMDYLEKRVTEETVHVNKQEAKDGVQSSLLSLLIS", "length": 215 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9JLV9-1", "protein_name": "Prolactin-2C5", "gene_name": "Prl2c5", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLPSLIQPCSWILLLLLVNSSLLWKNVASLPMCAMRNDRCFMFFEDTFELAGSLSHNISIEVSELFTEFEKHYSNVPGLRDKSPMRCHTSFLPTPENKEQARHIRYEALLKSGDMILDAWENPLDYLVSELSTIKNVPDIIISKATDIKKKINAVQNGVNALMSTMNGDEENKNPAWFLQSDNEDARIRSSYGMISCLDNDFKKVDIYLNILKCYMLKIDNC", "length": 222 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9LJY9-1", "protein_name": "Cytochrome P450, family 705, subfamily A, polypeptide 18", "gene_name": "CYP705A18", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MATLISVDFQHCFMYIILLCLFSLLCYSLFFRKPKGTRVGCDLPPSPPSLPIIGHLHHLLSSLTHKSLQKLSSKYGPFLHLRIFSVPIILVSSASVAYEIFKAHDVNVSSRGAAAIDESLLFGSSSFIYAPYGDYWKFMKKIFATKLLRPQVLENSRGVRAEELKRFYRRILDKARKNENIEISKESAMLMNNILCRMSMGRSFSEENGEAERVRGLVGESYALVKKIFFAATLRRLLEKLRIPLFRKEIMGVSDRFDELLERIIVEHKDKLEKEHQVMDMMDVLLAAYRDKNAEYKITRNHIKSFFVDLFVGGTDTSVQTTQWTMAEIINNPNILQTLRKEIDSVVGKSRLIHETDIPNLPYLQAVVKEGLRLHPPGPLLIRTFQERCEMKGFYIPEKTTLVINAYAVMRDPDSWEDPDEFKPERFLSYSRSGQEDEKEQTLKYLSFGGGRRGCPGVNLGYIFVGTAIGMMVQCFDWKIEGDKVNMEETYGGMNLTMVNPLKCTPVPRTQPFSFTSNLEILSS", "length": 524 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LSY1-1", "protein_name": "SKP1-like protein 8", "gene_name": "ASK8", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MSTKKIMLKSSEGKTFEIEEETARQCQTIAHMIEAECTDNVILVLKMTSEILEMVIEYCNKHHVDAANPCSDDDLEKWDKEFMEKDKSTIFALTNAANFLNNKSLLHLAGQTVADMIKGNTPKQMREFFNIENDLTPEEEAAIRRENKWAFE", "length": 152 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LTG5-1", "protein_name": "Callose synthase 4", "gene_name": "CALS4", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MNQPNRGQILQTVFSHFFPVASPDSELVPSSLHEDITPILRVAKDVEDTNPRSLFLQDLDIKSVDDSINILSGHSHALDKANELDPTSSGRDVRQFKNTILQWLEKNNESTLKARQKSSDAHEMQSFYQQYGDEGINDLLNAGAGSSSSQRTKIYQTAVVLYDVLDAVHRKANIKVAAKILESHAEVEAKNKIYVPYNILPLDPDSKNHAMMRDPKIVAVLKAIRYTSDLTWQIGHKINDDEDVLDWLKTMFRFQKDNVSNQREHLILLLANVQMRQTQRQPNLLDDRALDTVMEKLLGNYNKWCNHVGLESSLRFPKDKQQKVVQQRKLLYTGLYLLIWGEAANLRFMPECLCYIYHHMAFELFEMLESKGSKKKYKPKNPTYSGKDEDFLTKVVTPVYKTIAEEAKKSGEGKHSEWRNYDDLNEYFWSKQYLDKLGWPMKANADFFCKTSQQLGLNKSEKKPDLGDGCVGKVNFVEIRTFWHLFRSFDRMWSFYILSLQAMIIIAWNETSESGGAVFHKVLSVFITAAKLNLFQAFLDIALSWKARHSMSTHVRQRYIFKAVAAAVWVLLMPLTYAYSHTSIFIVAILIYLSPNMLPEMLLLIPSIRRTLEKSDFRPVKLIMWWSQPELYIGRGMHESAWSIYKYMMFWIVLLTSKLAFSYYVEQIKPLMGPTKEIMSVPMPGYWLPEFFPHVKNNRGVVITLWSPVILVYFMDTQIWYAIVSTLVGGLYGAFRHIGEIQTLGMLRSRFQSLPGAFNACLIPNENTKEKGIKLAFSRKCHKIPNTNGKEAKQFSQMWNTIINSFREEDLISNRELELLLMSCWAYPDLDFIRWPIFLLASKIPIAVDIAKKRNGKHRELKNILAEDNCMSCAVRECYASIKKLLNTLVTGNSDLMLITTVFTIIDTHIEKDTLLTELNLSVLPDLHGHFVKLTEYVLQNKDKDKIQIVNVLLKILEMVTKDILKEEIKRLHLLLTVKESAMDVPSNLEARRRLTFFSNSLFMEMPGAPKIQNMLSFSALTPYYSEDVLFSTFDLEKENDGVSILFYLQKIFPDEWKNFLERVKCGTEEELDAIDYLKEEIRLWASYRGQTLTKTVRGMMYYQKALELQAFFDLANERELMKGYKSAEASSSGSSLWAECQALADIKFTYVVACQQYSIHKRSGDQRAKDILTLMTTYPSLRVAYIDEVEQTHIYSKGTSENFYYSALVKAAPQTYSTDSSDSGHMLDQVIYQIKLPGPPIIGEGKPENQNNAIIFTRGEALQTIDMNQDYYIEEAFKMRNLLQEFLEKNGGVRYPTILGLREHIFTRSVSCLAWFMSNQEHSFVTIGQRVLANPLKVRFHYGHPDVFDRVFHLTRGGVSKASKVINLSEDIFAGFNSTLREGTVSHHEYIQVGKGRDVGLNQISMFEAKIANGSGEQTLSRDLYRLGHQFDFFRMLSCYFTTVGFYFCSMLTVLTVYVFLYGRLYLVLSGVEKELGNKPMMMEIILASQSFVQIVFLMAMPMIMEIGLERGFYDALFDFVLMQLQLASVFFTFQLGTKFHYYCKTLLHGGAEYRGTGRGFVVFHAKFAENYRFYSRSHFVKATELGILLLVYHIFGPTYIGLFTISIWFMVGTWLFAPFLFNPSGFEWHEIVEDWADWKKWIEYDNGGIGVPPEKSWESWWEKDIEHLQHSGKWGIVVEIFFALRFFIFQYGLVYQLSAFKNKYSSLWVFGASWLLILILLLTVTVLDYARRRLGTEFQLLFRIIKVSLFLAFMAIFITLMTCRLILPQDVFLCMLALIPTGWGLLLIAQSCKPLIQQPGIWSWVMTLAWVYDLVMGSLLFIPIAFMAWFPFISEFQTRMLFNQAFSRGLHISRILSGQRKHRSSKNKD", "length": 1871 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LU95-1", "protein_name": "Pyruvate kinase", "gene_name": "", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MEMLLGGQATNGALRSKTKIVCTLGPASRSVEMIEKLLKAGMNVARFNFSHGSHSYHQETLDNLRTAMDNTGILCAVMLDTKSPVIRTGFLKEGKPIQLKQGQEITISIDYKIQGDSNTISMSYKKLAEDLKPGDVILCSDGTISLNVLSCDKYLGLVRCRCENSALLGERKNVNLPGIVVDLPTLTEKDKEDIMQWGVPNKIDIIALSFVRKGSDLIQVRKLLGEHSKSIMLMSKVENQEGVMNFDKILENSDAFMVARGDLGMEIPIEKMFLAQKTMINKANAHGKPVVTATQMLESMTVSPRPTRAEATDVANAVLDGTDCVMLSGETAAGAHPETAVLTMSRICKEAEDFIDYDILHKKTLGMVSLPLSPIESLAASAVSTARSVFASAIVVLTRGGYTAELVAKYRPSVPILSVIMPEIAECSDSVAHVARRGLIYRGIIPVVGCSARDSTEEMIRLAIGFAKTKGICKTGDSIVALHKIDGSSIVRIVSVE", "length": 497 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LX08-1", "protein_name": "Annexin D6", "gene_name": "ANN6", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MASLKIPANIPLPEEDSEQLHKAFKGWGTNEGMIISILAHRNATQRSFIRAVYAANYNKDLLKELDGELSGDFERVVMLWTLDPTERDAYLANESTKLFTKNIWVLVEIACTRPSLEFFKTKQAYHVRYKTSLEEDVAYHTSGNIRKLLVPLVSTFRYDGNADEVNVKLARSEAKTLHKKITEKAYTDEDLIRILTTRSKAQINATLNHFKDKFGSSINKFLKEDSNDDYVQLLKTAIKCLTYPEKYFEKVLRRAINRMGTDEWALTRVVTTRAEVDLERIKEEYLRRNSVPLDRAIANDTSGDYKDMLLALLGHDHA", "length": 318 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LXS7-1", "protein_name": "Citrate synthase 1, peroxisomal", "gene_name": "CSY1", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MEISERARARLAVLNAHLTVSEPNQVLPAIEPWCTSAHITAAPHGSLKGNLKIVDERTGNEYQVPVSEHGTVKTVDLKKITTGKDDKGLNLYDPGYLNTAPVRSSISYIDGDEGILRYRGYPVEELAEKSTYTEVTYLLIYGNLPSQRQLADWEFAISQNSAVPQGVLDMIQSMPNDVHPVGALVTAMSALSIFYPDANPSLMGLGVYKSKQVRDKQIVRVLGQAPTIAAAAYLRKAGKPPVQPLSNLSYSENFLYMVESMGDRSYKPNPRLARVLDILFILQAEHEMNCSTAAARHLSSSGGDVYTAVSGGVGAIYGPLHGGAVEATINMLSEIGTVENIPEFIESVKNKKRRLSGFGHRIYKNYDPRGKVVKKLADEVFSILGRDPLVEVGDALEKAALSDEYFVKRKLYPNVDFYSGLINRAMGIPSSFTAVSRIAGYLSHWRESLDDPDTKIMRPQQVYTGAGIRHYETVRERTKL", "length": 480 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LY06-1", "protein_name": "Glycine/proline-rich protein", "gene_name": "", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MITCILKISISSFIVLRIFSFLWFSRWFCCGLCGRFWFRCWFCCWFQFWFRCRFYCRFDTGFDVRFAAGFAADLTIGFTIGFDSGFATFLDVGLDDGFATGLDISFAGGFVTGFATDFDVGFDTGFTIGFDTGFDVGLPAVFSIGFDTGFAVGFAISFTVGFDAGFPTGFFVSLDVGFVADFVIGFATGIGVGFEVDFATDFDTCFATGFAVSFDVGFAGGFSIGFAADFANGFTVGFDGGFDASFFVGLDVGFVVGFVTSFAAGLDVGFAIDFATGFDTGFAFGLAFGFDVGFAAGFAVGFATGFTVVFDVGFASDFFVGLDVGFLTGFATDFDIGFVVDFDIGFATGFVVGFDDGSIVGLVVGLPASLDDGLAIDFVVGLDIGFVTGLFVGLVDGLTTDLDVGLVDGLDDGLDDGLDVDLVVVGFVVDGLAVDLDVGLGVGLTVGFVDGLDVGFDDGLDADTVDGLDVGLDDGLDVDLVDGLDIGLDDGLDVGLDDGLDFGLVDGLDVDLDDGLDVDLVDGLDIGLDDGLDVGLDDGLDFGLVDDGLVVGLFDVFVGTGLSWEIPPPGKLPPDASPLGIGSFGVGPPGASPFIASPSGEGPLSEGLLGIRSFGISPLSIRPLGISPLGISPPNIEPSKADASDADPSNAGPLGISPLSIDPPVAGASDEGPLGKLPPDLSPPGKGSSGEGPLVESPPSEGPLGVDPLGAGSLGISPLGKSPLRIRPLGISPFGKIPSNIDPSSALASDGGPPDEPASAEGSPDVGIFGISPPIIDPPVEGASDGDPPEKLSLDISPLGKGPSGVSLLGAGPPGVGPVIASPPGEGPRDAGPLGAGSLGISPLNIRRLGISPSGISPPNIDLPVAGTSIGGPPDEGASDGGPPDVGPFGISPPIIDPPGESESDGDPAGKLPLDISPLSKGPSCVSPLGVGPVIASPPGEGPLDAGPLGAGSLGISPLNIRRLSISPFGISPSSIDSPVAGTSIGGPPDEGASDGGPPDVGPFGISPPIIDPPGEDASDGDPPGKFPLDISPLGKCPSGVSPLGVGPPGVGPVIASPPGEGPLDAGPLGAGSLGISPLNIRRLGISPFGISPPNIDLPVAGTSIGGPLDEGASDGGPPDVGPFGISPSIIDPPGEGAFDGDPPGKLPLDISPVGKGPSGVSPPGAGPPGDGPVIASPPGESPLDAGPLGAGSLGISPFGISPPNIDWPVAGTSFGGPPGEGASNGGPLVVGPFDMPVVGASDGDALEKLPLDISLPGKGPSDVGPPGAGLPGAAPPGVDLSNVGASDRGASGEGASDGCPPDVGPFDICLLSIDPPVVGASDGGPPDEGASNGGPPDTDSFGGDPLCASPLGIDPPIVDASDGDPFGAGSPDEDPSNENASGEGASGESPPCSDVSCKGPSSAGASIGCSLDNGASTPSSPDTFLSNVFPSDKSSPDAFSPDVAALVTLPSGKDPFDISPPIVALLDVSPLGKTSSDAYSSGISPGIFEKSFPLVKLQTIEYM", "length": 1504 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M2S0-1", "protein_name": "Probable mannose-1-phosphate guanylyltransferase 2", "gene_name": "", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MKALILVGGFGTRLRPLTLSLPKPLVDFANKPMILHQIEALKAIGVDEVVLAINYEPEQLLVMSKFSNDVEATLGIKITCSQETEPLGTAGPLALARDKLVDGSGQPFFVLNSDVISDYPLEEMIAFHNAHGGEASIMVTKVDEPSKYGVVVMEEATGRVERFVEKPKLFVGNKINAGIYLLNPSVLDRIELRPTSIEKEIFPQIAEAEKLYAMLLPGFWMDIGQPRDYITGLRLYLDSLRKKSPSKLATGPHILGNVLVDETAEIGEGCLIGPNVAIGPGCVVESGVRLSHCTVMRGVHVKRYACISSSIIGWHSTVGQWARVENMSILGKNVYVCDEIYCNGGVVLHNKEIKSDILKPDIVM", "length": 364 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9NR96-1", "protein_name": "Toll-like receptor 9", "gene_name": "TLR9", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MGFCRSALHPLSLLVQAIMLAMTLALGTLPAFLPCELQPHGLVNCNWLFLKSVPHFSMAAPRGNVTSLSLSSNRIHHLHDSDFAHLPSLRHLNLKWNCPPVGLSPMHFPCHMTIEPSTFLAVPTLEELNLSYNNIMTVPALPKSLISLSLSHTNILMLDSASLAGLHALRFLFMDGNCYYKNPCRQALEVAPGALLGLGNLTHLSLKYNNLTVVPRNLPSSLEYLLLSYNRIVKLAPEDLANLTALRVLDVGGNCRRCDHAPNPCMECPRHFPQLHPDTFSHLSRLEGLVLKDSSLSWLNASWFRGLGNLRVLDLSENFLYKCITKTKAFQGLTQLRKLNLSFNYQKRVSFAHLSLAPSFGSLVALKELDMHGIFFRSLDETTLRPLARLPMLQTLRLQMNFINQAQLGIFRAFPGLRYVDLSDNRISGASELTATMGEADGGEKVWLQPGDLAPAPVDTPSSEDFRPNCSTLNFTLDLSRNNLVTVQPEMFAQLSHLQCLRLSHNCISQAVNGSQFLPLTGLQVLDLSHNKLDLYHEHSFTELPRLEALDLSYNSQPFGMQGVGHNFSFVAHLRTLRHLSLAHNNIHSQVSQQLCSTSLRALDFSGNALGHMWAEGDLYLHFFQGLSGLIWLDLSQNRLHTLLPQTLRNLPKSLQVLRLRDNYLAFFKWWSLHFLPKLEVLDLAGNQLKALTNGSLPAGTRLRRLDVSCNSISFVAPGFFSKAKELRELNLSANALKTVDHSWFGPLASALQILDVSANPLHCACGAAFMDFLLEVQAAVPGLPSRVKCGSPGQLQGLSIFAQDLRLCLDEALSWDCFALSLLAVALGLGVPMLHHLCGWDLWYCFHLCLAWLPWRGRQSGRDEDALPYDAFVVFDKTQSAVADWVYNELRGQLEECRGRWALRLCLEERDWLPGKTLFENLWASVYGSRKTLFVLAHTDRVSGLLRASFLLAQQRLLEDRKDVVVLVILSPDGRRSRYVRLRQRLCRQSVLLWPHQPSGQRSFWAQLGMALTRDNHHFYNRNFCQGPTAE", "length": 1032 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q9QUG3-1", "protein_name": "Prion-like protein doppel", "gene_name": "Prnd", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKNRLGTWWVAILCMLLASHLSTVKARGIKHRFKWNRKVLPSSGGQITEARVAENRPGAFIKQGRKLDIDFGAEGNRYYAANYWQFPDGIYYEGCSEANVTKEMLVTSCVNATQAANQAEFSREKQDSKLHQRVLWRLIKEICSAKHCDFWLERGAALRVAVDQPAMVCLLGFVWFIVK", "length": 179 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9SAC9-1", "protein_name": "AP-1 complex subunit mu-1", "gene_name": "AP1M1", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MAGAASALFLLDIKGRVLVWRDYRGDVTAAQAERFFTKLIETEGDSQSNDPVAYDNGVTYMFVQHSNIYLMIASRQNCNAASLLFFLHRVVDVFKHYFEELEEESLRDNFVVVYELLDEMMDFGYPQFTEARILSEFIKTDAYRMEVTQRPPMAVTNSVSWRSEGLKFKKNEVFLDVIESVNILVNSNGQIVRSDVVGALKMRTYLSGMPECKLGLNDRILLEAQGRAIKGKAIDLEDIKFHQCVRLARFENDRTISFIPPDGSFDLMTYRLSTQVKPLIWVEAHIERHSRSRVEMLVKARSQFKDRSYATSVEIELPVPTDAYNPDVRTSLGSAAYAPEKDALVWKIQYFYGNKEHTLKADFHLPSIAAEEATPERKAPIRVKFEIPKFIVSGIQVRYLKIIEKSGYQAHPWVRYITMAGEYELRLM", "length": 428 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SCN2-1", "protein_name": "Cytochrome P450 71B31", "gene_name": "CYP71B31", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MSMFLGLLFLFPLFFILFKNLLPPRKKLPPGPTGLPLIGNLHQLGRLLHSSLHKLSLEHGPVMLVRWGVVPMAVFSSNEAAKEVLKTHDLETCNRPKLVANGLFTHGYKDIGFTQYGEEWREMKKFVGLELFSPKKHKSFRYIREEEGDLLVKKISNYAQTQTLVDLRKSLFSYTASIIFREAFGQNFRECDYINMDKLEELVQETETNVCSLAFTDFFPRGLGWLVDRISGQHSRMNIAFSKLTTFFEDVIDELLKTKQLDDHSDLVTAMLDVINRPRKFGSLKITYDHLIAMMSDVVLAGVNAGTVTMIWTMTELTRHPRVMKKLQEEIRATLGPNKERITEEDLEKVEYLNLVIKESFRLHPPAPLLLPRETMSDIEIQGYHIPKNAHVKINTYAIGRDPKRWTNPEEFNPERFLNTSINYKGQHYELLPFGAGRRNCPGMTLGITILELGLLNILYYFDWSLPSGMTIKDIDMEEDGALNIAKKVPLQLVPTLP", "length": 498 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SJ39-1", "protein_name": "Cytochrome P450, family 705, subfamily A, polypeptide 6", "gene_name": "CYP705A6", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MAAILSVDFQNCFIFIVLCLFSLFCYSLFFKKPKHPRGCDLPPSPPSLPIIGHLHLLFSPLTHKSLQKLSSKYGHLLHLRIFNVPVILVSSASVAYEIFRAHDVNVSSRGVAAIDESLLFGSSGIITAPYGDYWKFMKKLIATKLLRPQSLESSRGIRGEELTRFYNSLLDKARMTESVEISTEAMKLVNNTLCRMSMGRSFSEENGEAEKIRGLVGESYALTKKMFLASLLRKPLKKLRISLFEKEIMGVSDRLDELLERILVEHEEKLHEEHQGTDMMDVLLAASGDENAEYNITRNHIKSFFVEIFIGATDTSVQTTQWTMAEILNHPNVLERLRKDIDSVVGKTRLIHETDLPNLPYLQAVVKEGLRLHPPGPLLVRTFQERCKIKGFYIPEKTTLVINAYAVMRDPDSWEDPDEFKPERFLRAPPMGGSLDKFIEFS", "length": 442 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SMT4-1", "protein_name": "Large ribosomal subunit protein eL13y", "gene_name": "RPL13C", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MKHNNVIPNGHFKKKWENYVKTSFNQPAMKTRRRIARQNKAVKIFPRPTAGPIRPVVHAQTLTYNMKVRAGKGFTLEELKAAGIPKKLAPTIGISVDHHRKNRSLEGFQTNVQRLKTYKAKLVIFPRCARTVKVGDSAQQELANATQVQVDHMPIVREMPTMELVKLTSDMKLFNAYDKIRLEGINKRHAGVRAKRAAEAEKEEKK", "length": 206 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SSB4-1", "protein_name": "26S proteasome regulatory subunit 7 homolog B", "gene_name": "RPT1B", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MIIRDIMEDPENEGPHNMRSDFEPLLSVLRLRDYETGDIIEFDSTEASEEALSDITEFGSTEASEAHFEEPYSARIKKVEKEINELAEKICNLGIKESDTGLAPPNQWDLVSDKQMMQEEQPLLVATCTQIISPNTEDAKYVVDIKKIGKYVVGLGDKASPTDIEAGMRVGVDQKKYQIQIPLPPKIDPSVTMMTVEEKPDATYSDIGGCKEQIEKIREVVELPMLHPEKFVRLGIDPPKGVLCYGPPGSGKTLVARAVANRTGACFIRVVGSELVQKYIGEGARMVRELFQMARSKKACILFFDEIDAIGGARFDDGVGSDNEVQRTMLEILYQLDGFDARGNIKVLMATNRPDILDPALLRPGRLDRKVEFCLPDLEGRTQIFKIHTRTMSCERDIRFELLAGLCPNSTGADIRSVCIEAGMYAIGARRKSVTEKDFLDAVNKVVKGYQKFSATPKYMAYYI", "length": 464 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SVM4-1", "protein_name": "Serine hydroxymethyltransferase 5", "gene_name": "SHM5", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MEPVYSWGNTHLDFVDPEIYDLIEKEKHRQCRGIELIAAENFTSVAVMEALGSCLTNKYSEGMPGNRYYGGTEFIDEIESLCRSRSLEAFHCNPEKWGVNVQPYSGSPANFAAYTALLQPHDRIMGLDLPSGGHITHGYYSSGGKNISATSIYFENLPYKVDSKTGYIDYDKLEEKAMDFRPKLIICGGTSYPREWDYARFRAVADKVGAFLLCDMAHNSALVAAQEAADPFEYCDVVTTSTHKSLRGPRAGMIFYRKGPKPAKKGQPEGEVYDFDAKINSAVFPALQSGPHNNKIGALAVALKQVMAPSFKVYAKQVKANAACLASYLINKGYTLVTDGTDNHLILWDLRPLGLTGNKVEKVCELCYITLNRNAVFGDTSFLAPGGVRIGTPAMTSRGLVEKDFEKIGEFLHRAVTITLDIQEQYGKVMKDFNKGLVNNKEIDEIKADVEEFTYDFDMPGFFISESRND", "length": 470 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SWH4-1", "protein_name": "Syntaxin-42", "gene_name": "SYP42", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MATRNRTTVYRKHRDACKSARAPLSLSASDSFGGPVIEMVSGSFSRSNHSSYAPLNSYDPGPSSSDAFTIGMPPAWVDDSEEITFNIQKVRDKMNELAKAHSKALMPTFGDNKGIHREVEMLTHEITDLLRKSEKRLQMLSTRGPSEESNLRKNVQRSLATDLQNLSMELRRKQSTYLKRLQQQKEGQDEVDLEFNVNGKMSRLDEEDELGGMGFDEHQTIKLKEGQHVSAEREREIQQVLGSVNDLAQIMKDLSALVIDQGTIVDRIDYNVQNVSTSVEEGYKQLQKAERTQREGAMVKCATILLVLCLIMIVLLILKNILF", "length": 323 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SZB4-1", "protein_name": "Putative DEAD-box ATP-dependent RNA helicase 43", "gene_name": "RH43", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MEVDDGYVEYVPVEERLAQMKRKVVEEPGKGMMEHLSDKKKLMSVGELARGITYTEPLSTWWKPPLHVRKMSTKQMDLIRKQWHITVNGEDIPPPIKNFMDMKFPSPLLRMLKDKGIMHPTPIQVQGLPVVLSGRDMIGIAFTGSGKTLVFVLPMIILALQEEIMMPIAAGEGPIALVICPSRELAKQTYDVVEQFVASLVEDGYPRLRSLLCIGGVDMRSQLDVVKKGVHIVVATPGRLKDILAKKKMSLDACRLLTLDEADRLVDLGFEDDIRHVFDHFKSQRQTLLFSATMPAKIQIFATSALVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTTPPVLIFCENKADVDDIHEYLLLKGVEAVAIHGGKDQEDRDYAISLFKAGKKDVLVATDVASKGLDFPDIQHVINYDMPGEIENYVHRIGRTGRCGKTGIATTFINKNQSEITLLDLKHLLQEAKQRIPPVLAELNGPMEETETIANASGVKGCAYCGGLGHRILQCPKFEHQKSVAISSSRKDHFGSDGYRGEV", "length": 542 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9T0E0-1", "protein_name": "Putative ATPase, plasma membrane-like", "gene_name": "", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MATGDSLEDIKIEIDDDLEKIPIEEVFKKLRCSREGLSGAEGKERLKIFGPNKLENKKKEHITLRFFALMFKPLSWVIQAAAIMAMLFANGDGRQLFLGIVCLLIVNTIICYLKEDDAANVVAMARAGLSPKTKVLRDGKWSEQEASILVPGDIVSIKPGDIIPCDARLLEGDTLKVDQSALTGEFGPITKGPGEEVFSGTTCKQGEMEAVVIATGVHTFSGTTAHLVDNRTNKVGHFRKVVTEIENLCVISIAIGISIEVIVMYWIQRRNFSDVINNLLVLVIGGIPLAMPTVLYVIMVTGSLRLYRTGTITQRITAIEDMAAIDVLCSDKTGTLTLNKLSVDKNLIKVYSKDVEKEQVLLLAARASRIENRDGIDAAMVGSLADPKEARAGIREVHFNLVDKRTALTYIDGNGDWHRVSKGTPEQILDLCNARDDLRKSVHSAIRNYAERGLKSFAISWFRNTNCNTVFFFPYQLCSEHKYHIVNKLQERHICGLIGDGVDDVPSLKKADVGIAVANATEAARAASDIVLTEPGLSVIIDAVLASRAILQQMKHYTIYAVSITIRVVFGFMFIALIWKFDFSPFMVLAIALLNEETTKAITMDNVTNPSPTPDSLKLKEIFATGVVYGSYMALITVVFFWAAYRTDIFPRTFHVRDLRGNEAEMMCALYLQVSIMSQALFFVIQSRSWFFVERPGELLFLSFVTVQTIATTLAVYASWETARIEGIGWSWAGVIWLYNIIFFFPLDIMKFGIRYILTGKAQSLFDNMVHLVLNSYAKLSNGIYNHTQADHTYSLLEVSTPPSQDLRGVGWV", "length": 813 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9T0H7-1", "protein_name": "Histone H2A.8", "gene_name": "", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MVCNTNILKDVSTKISAFENVRMIMVEGEMFQVARIHKQLKNRVSAHSSVGATDVVYMTSILEYLTTEVLQLAENTSKDLKVKRITPRHLQLAIRGDEELDTLIKGTIIGGSVIPHIH", "length": 118 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9VXF6-1", "protein_name": "Calnexin 14D", "gene_name": "Cnx14D", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MAWKMLFAILLLLSAAKTGYLAPESENSVEDVQIEPGAIYGDEKFAYKSPVIDAEKFYFADHFDDVEASRKRWVLSQAKKNDIADEIAKYDGIWNWESPQRIFWANDLGLVLKSKAKHAAIAAPFRQPFDFKSNKPLVVQYELTLQEGQDCGGSYLKLLSAGKGTEQLNRFNDKTPYTIMFGPDKCGNNLKMHFIFRHVNPLNGNITEKHCKKPNARLGVPFTDKLPHLYQLVVRPDNSFEIRLDHKIIKEGSLLTDFVPPVNPPAEIDDPNDHKPESWDERKKIPDPNAHKPEDWDEDAPPHLPDTDAVMPNGWLEDEPDMIFDPTAIEPEDWNSEIDGEWEAPLVENPVCKKAPGCGKWKAPLIPNPNYKGKWSAPMIENPNNQGKWAPRKIANPDFFEDLKPFQMTPINAVGLELWSMSSDILFDNLIITDDVELARDFAANSFDIKRLYIDRESFGNKVVELARANRAIWGIVIVAIAVPVAITIFCKFGLGPSRVAAAKKAAAAAAKKTDDPQPDDDLGAEEEEKLEKGKKEEEKKEEEEEEEKEENKEEKKEEEKDDEKEMKDCEEEEDDEEKDDEEKTDERAAGDTNKESTPLSASPKKNQKSYLDNNEDEEDTLKNKEPTPKKRKRKALKE", "length": 639 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9W240-1", "protein_name": "K Homology domain-containing protein", "gene_name": "cg3927", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "METPSELTEKQNQDQPTYQPRLNEVAQKFLADLDAERKRLSAEFPLCALLIDESVDRVYSTGRIPGKEPFADVYQQKPMKIIQKVFVPVNKFPKFNFTGKILGPKGNSLRRLQEETHCKIVIKGRNSMRDRNKEEELRSSGDPRYAHLHKDLFLEVSAVAPPAECYARIAYALAEIRKYLIPDDNDDVWHEQQRELMEMNPKSAKKSNGLNMAPYRSNFDKAIGAIRNRAPKYNNQIRRVTENPREVAYMEEVEYDYDEHLMFCSPVVRL", "length": 270 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9W4G6-1", "protein_name": "Uncharacterized protein", "gene_name": "Dmel\\CG2861", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MDYEIIEFVRRHISHIDISAETRMRYPDPISNNNFDWNSIGLGEQEDAIGQDQQSQALNENANNVSPDVPPSTIAEPTLEPSTIEGNQGQNPRIISSMPDMMPMANSFNPLININQEAGVVINTGINSIDNGLPSTYSEHISQPTNTESTRNMNSSIFDIPSDLDNNSSNESGDEVTQPTAKQSKINANFVCKIESDTNMDKLPTTSNNTNDKPPNNTDSDSDIISISDLIEDLNLDFNQLPITSCDVETHPADTQSNIDANLPYDLISAINMDFVNPANRTYMSAANSTRGTAYKIRKPRTVKRIIKAPSKSNIGKLLREAAKKENAAAGTQRPKKATSTITSSVQNFPNPNNWPACPFPMQNGTMPADEPNDLMPTVSQSLTVPAAQNRPIQTIGKIIKPPVKRTYTKRANKTNNTNIPNKNSTGVIQSNGVAPTIRQGLVEPGGTNILMPWNRQIPMVSVAENPRVQTIDKIIVPPPKRTYKKRVNKTVNTNQSSESAVGDGAPSAPIQSIPKVRKPRGPGKKTAKMVPGQESQQDIPLGVPPNGEAPQTSSQAPVPRVKRAYRKRANNTNNTNILNVNSTGVMESNGGGPTIPNSQQIPNVAVVLNLPIQPIKPKAPRKPRAKKVCNQQPGTDIPFGVSAQGQTAQIKPKPKPRAPRVPKEPKAPKEPKAPKVPKAPRVPKAPRVPKAPRVPKAPRVPKPPKEPKPPKEPKPPKQPKAPRVPKEPKPPKVPKEPKAPRAPRAPRVPKAPKEPKVPKIPKNPRVPKAPRQPKASMNKIQNTVKVPLPIEPVPLETPTYINPINTPVQSTVGEILALGSMPPISPIKFPVLFDEHAAQHTVANSNMPQSSLPTLDIPQLPTRNNKQPSTKSAEDTEILGLGKNKNAMKSDGRIKQGRVSKPSLRFSPSSSSLRPVVRSLSSSSSSSSSWSSCTTCSTCSSCSTCSSSSDSSQSSRSRNRKRRSPKVPIPHKLFESNGEINFQLGQPTRLESPSPPPPVPMQACGTFEEHLTDLTLVRVHAISPLRSPTYDFDFDLPEPMLSEESSSSSSESNDESNVNCQMAPNSQNVSMHFLKVMVFYNCYVLFQQLEKKHQSLFEESSSSSSSESNDETNVNCQMTPNSQNQKKLQSAPIREPSPDQPPEAASRSSNGGTIGPCNLKAFRRDFMISNAENTGFTNPSELNLKKCATKVCTPMERNSGSQLPIQNRFILPNSNKEEGKMNVEPVMPKHKPSRIPIRTKTPIALNLMKEPEDNARKPKNILKPFFSNADVNPCSSTDYEPNFKPCESPLPAKQNDFKLINKDKKSWVSHYQEQESQELKENSFFYAKFNLPNIPKKSFKDSKANAERRCTKTFEDVRKEAQQSRYTKAINKRQNKKAMLESALGNAITEDPTVNCNLADNPNDQVEMPRNPDIVEPTVKPVKFKAFVSASIKPKSSKKRKLMNSASNSKLFKFKIFESEVNKDENEEEDVIPDNLIIPVKRKQNISELLDMQPSTSKAAATITSQPKIAQLKRMPSKLLNEKMKSYAKKRSNDDENKDTKNTGMHMHRYKIPKLSANKPQNTSTTQSPTRGFSRLPGMYQEPNFQNAQHPFSTRGYYPYQRAYPLHRPTSQYHMNQPQPLRLHHSMYVDAEPSFESVFPAPRYQPYNINPSMRHHYSYPGEPSPSTYPMGGIPFQNNNTLYPPMRNDLCYPRGRLNYPVRNLPPMNSQGTYPPNYPQNFLPNYPPSRQFLLSMQRLADINKQIASGSIESVGGFIQMAYAGRKYRTLKDLRERTMLSKDSLRKIFKCMCKIKRPKWRISKFYLYAYWCEISGIPQSSEFGKPLELNAAYRKVISSYAENKFLRMESLMEKTGFGKSKLKRVLKMIGRKRSTKWRLLNYRKPLIHLHRSQDM", "length": 1893 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9W6A5-1", "protein_name": "Green-sensitive opsin-1", "gene_name": "opn1mw1", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MNGTEGSNFYIPMSNRTGLVRSPYDYTQYYLAEPWKFKALAFYMFLLIIFGFPINVLTLVVTAQHKKLRQPLNYILVNLAFAGTIMVIFGFTVSFYCSLVGYMALGPLGCVMEGFFATLGGQVALWSLVVLAIERYIVVCKPMGSFKFSANHAMAGIAFTWFMACSCAVPPLFGWSRYLPEGMQTSCGPDYYTLNPEYNNESYVMYMFSCHFCIPVTTIFFTYGSLVCTVKAAAAQQQESESTQKAEREVTRMVILMVLGFLFAWVPYASFAAWIFFNRGAAFSAQAMAVPAFFSKTSAVFNPIIYVLLNKQFRSCMLNTLFCGKSPLGDDESSSVSTSKTEVSSVSPA", "length": 349 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q9XK79-1", "protein_name": "NADH-ubiquinone oxidoreductase chain 4L", "gene_name": "nad4L", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MNLIDLILIAIYVIGISGLIFNKNNIINILIISELNLGTLGMLFVLASVELNDILGELSGLYILTFTAAESAIGLAIVVILYSKTGIINIRHLNKLKG", "length": 98 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q9Y2B0-1", "protein_name": "Protein canopy homolog 2", "gene_name": "CNPY2", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MKGWGWLALLLGALLGTAWARRSQDLHCGACRALVDELEWEIAQVDPKKTIQMGSFRINPDGSQSVVEVPYARSEAHLTELLEEICDRMKEYGEQIDPSTHRKNYVRVVGRNGESSELDLQGIRIDSDISGTLKFACESIVEEYEDELIEFFSREADNVKDKLCSKRTDLCDHALHISHDEL", "length": 182 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q9Z1X0-1", "protein_name": "C-C motif chemokine 27", "gene_name": "Ccl27", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MMEGLSPASSLPLLLLLLSPAPEAALPLPSSTSCCTQLYRQPLPSRLLRRIVHMELQEADGDCHLQAVVLHLARRSVCVHPQNRSLARWLERQGKRLQGTVPSLNLVLQKKMYSHPQQQN", "length": 120 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "S4R2L0-1", "protein_name": "Secretoglobin, family 2B, member 12", "gene_name": "Scgb2b12", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKGILLLLGLLITGELSFQTTEACVPFFEVYASVLSGSRVWLYHELQSFDATAEEKVALEKIQGCYREERLRNILLEPKIMEAMVASPECRSYYSLDNFRSILDFISNLLGE", "length": 112 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "W4VSP8-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r10", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSSFKNVLYFQAGLGVLANMVLLLFYIFIILGHRPKPTDLISCQLTFVHIIMVLTGGDILLTDLFELLNIENDLKCKTIFYISRVMRGLSICTTCLLSVFQAVTISPNTSLMAKFKQKLKKYMACVFLCIWSFNLAFSTNRIFYVGGFTNVSETNQMQVTKSCSLLPMNIIIRGFIFTISTSRDVFLVGVMLTTSVYMVITMFRYHRQCKYLYSISHLRESPEKRATQTIVLLVSFFVVMYWVDFIISFTSDMIWMYDPLILTVQKFMMYAYPTITPLVQISSDNRIIIMLKNLQSKHQQRFFNKDIFFSL", "length": 311 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "X1WF74-1", "protein_name": "Uncharacterized protein LOC100334758 precursor", "gene_name": "si:dkey-52p2.5", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MARTSENMIGKVLFVLFLLSGPTSVLTDFHSLQILGTYIKGDTLFPQISFTFMLDDLTVGLYITERDEFIPRDNTTNEDETVSDMLDKIKNELQPLLKGTLIFQNSTESPQLFQIAWHCELLDNNKTGQMILKIAFSGSTTDEVSFYGNNFTCQCQNNMATVPLEYFQMQFKSIYYPVCMTTLGGYLVKRQVQVNRKVQPKVRLIKKVHPKSGGFRLSCLASEFYPYFINLTLLRDGQPVSDHEVTGGDLLPNGDGTYQMRKSLEIRADEREKHKYTCSAKHLDKNLDVDFEFDPSYPVKIVIPVVVLLSLVLVLTAVLIHKCMNKQAASPPEQQEPIEMGGRLRK", "length": 346 }, "evidence": [ { "id": "Q9SYN6", "url": "https://omabrowser.org/oma/group/Q9SYN6/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "chloroplast", "id": "GO:0009507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009507", "evidence": [ { "database": "UniProtKB", "id": "Q9SYN6", "url": "https://www.uniprot.org/uniprotkb/Q9SYN6" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 107, "end_pos": 109, "annotation": "n_glycosylation_sequon" }, { "start_pos": 54, "end_pos": 56, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 107, "end_pos": 109 }, { "start_pos": 54, "end_pos": 56 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": 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"total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "Q9SYY5-1", "uniprot_ac": "Q9SYY5", "uniprot_id": "Q9SYY5_ARATH", "mass": { "chemical_mass": 13189.0, "monoisotopic_mass": 13189.0 }, "refseq": { "ac": "NP_195374", 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"MRNETGGTMVVDLQTDPYNNIHSRHNLSYDLSEGPKPRPKFGNISKTDHDEIFPPDDPIIINSNVTHQRFSSVSASTMSSGPASGEGSPCVMSPWARVSPPWGADFNEDNVLETNGLIGSIVRKEGHIYSLAASGDLLYTGSDSKNIRVWKNLKEHAGFKSSSGLIKAIVIFGDRIFTGHQDGKIRIWKVSKRKPGKHKRVGTLPTFKSMVKSSVNPKHFMEVRRNRNSVKTKHNDAVSSLSLDVELGLLYSSSWDTTIKVWRIADSKCLESIHAHDDAINSVMSGFDDLVFTGSADGTVKVWKRELQGKGTKHTLAQVLLKQENAVTALAVKSQSSIVYCGSSDGLVNYWERSKRSFTGGILKGHKSAVLCLGIAGNLLLSGSADKNICVWRRDPSDKSHQCLSVLTGHMGPVKCLAVEEERACHQGAKASVAEGDRKWIIYSGSLDKSVKVWRVSERMATWKEMDEPAASSERKSSSSPHEGSGAWSSRNVEK", "length": 495, "header": "tr|Q9SZ03-1|Q9SZ03_ARATH Isoform 1 of Transducin/WD40 repeat-like superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SZ03-1" }, "isoforms": [ { "isoform_ac": "Q9SZ03-1", "url": "https://www.uniprot.org/uniprotkb/Q9SZ03/entry", "sequence": { "sequence": 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Haase D, Lemcke K, Mewes H W, Stocker S, Zaccaria P, Bevan M, Wilson R K, de la Bastide M, Habermann K, Parnell L, Dedhia N, Gnoj L, Schutz K, Huang E, Spiegel L, Sehkon M, Murray J, Sheet P, Cordes M, Abu-Threideh J, Stoneking T, Kalicki J, Graves T, Harmon G, Edwards J, Latreille P, Courtney L, Cloud J, Abbott A, Scott K, Johnson D, Minx P, Bentley D, Fulton B, Miller N, Greco T, Kemp K, Kramer J, Fulton L, Mardis E, Dante M, Pepin K, Hillier L, Nelson J, Spieth J, Ryan E, Andrews S, Geisel C, Layman D, Du H, Ali J, Berghoff A, Jones K, Drone K, Cotton M, Joshu C, Antonoiu B, Zidanic M, Strong C, Sun H, Lamar B, Yordan C, Ma P, Zhong J, Preston R, Vil D, Shekher M, Matero A, Shah R, Swaby I K, O'Shaughnessy A, Rodriguez M, Hoffmann J, Till S, Granat S, Shohdy N, Hasegawa A, Hameed A, Lodhi M, Johnson A, Chen E, Marra M, Martienssen R, McCombie W R", "evidence": [ { "database": "UniProtKB", "id": "Q9SZ03", "url": "https://www.uniprot.org/uniprotkb/Q9SZ03" } ], "reference": [ { "type": 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"publication", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "Q9SZ14-1", "uniprot_ac": "Q9SZ14", "uniprot_id": "Q9SZ14_ARATH", "mass": { "chemical_mass": 23681.0, "monoisotopic_mass": 23681.0 }, "refseq": {}, "gene_names": [ { "name": "F10M23.70", "type": "synonym", "evidence": [ { "id": "Q9SZ14", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SZ14" } ] }, { "name": "F10M23_70", "type": "synonym", "evidence": [ { "id": "Q9SZ14", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SZ14" } ] } ], "protein_names": [ { "name": "S-adenosyl-L-methionine-dependent methyltransferases superfamily protein", "type": "synonym", "evidence": [ { "id": "Q9SZ14", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SZ14/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": 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Weichselgartner M, de Simone V, Obermaier B, Mache R, M\u00fcller M, Kreis M, Delseny M, Puigdomenech P, Watson M, Schmidtheini T, Reichert B, Portatelle D, Perez-Alonso M, Boutry M, Bancroft I, Vos P, Hoheisel J, Zimmermann W, Wedler H, Ridley P, Langham S A, McCullagh B, Bilham L, Robben J, Van der Schueren J, Grymonprez B, Chuang Y J, Vandenbussche F, Braeken M, Weltjens I, Voet M, Bastiaens I, Aert R, Defoor E, Weitzenegger T, Bothe G, Ramsperger U, Hilbert H, Braun M, Holzer E, Brandt A, Peters S, van Staveren M, Dirske W, Mooijman P, Klein Lankhorst R, Rose M, Hauf J, K\u00f6tter P, Berneiser S, Hempel S, Feldpausch M, Lamberth S, Van den Daele H, De Keyser A, Buysshaert C, Gielen J, Villarroel R, De Clercq R, Van Montagu M, Rogers J, Cronin A, Quail M, Bray-Allen S, Clark L, Doggett J, Hall S, Kay M, Lennard N, McLay K, Mayes R, Pettett A, Rajandream M A, Lyne M, Benes V, Rechmann S, Borkova D, Bl\u00f6cker H, Scharfe M, Grimm M, L\u00f6hnert T H, Dose S, de Haan M, Maarse A, 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J, Graves T, Harmon G, Edwards J, Latreille P, Courtney L, Cloud J, Abbott A, Scott K, Johnson D, Minx P, Bentley D, Fulton B, Miller N, Greco T, Kemp K, Kramer J, Fulton L, Mardis E, Dante M, Pepin K, Hillier L, Nelson J, Spieth J, Ryan E, Andrews S, Geisel C, Layman D, Du H, Ali J, Berghoff A, Jones K, Drone K, Cotton M, Joshu C, Antonoiu B, Zidanic M, Strong C, Sun H, Lamar B, Yordan C, Ma P, Zhong J, Preston R, Vil D, Shekher M, Matero A, Shah R, Swaby I K, O'Shaughnessy A, Rodriguez M, Hoffmann J, Till S, Granat S, Shohdy N, Hasegawa A, Hameed A, Lodhi M, Johnson A, Chen E, Marra M, Martienssen R, McCombie W R", "evidence": [ { "database": "UniProtKB", "id": "Q9SZ65", "url": "https://www.uniprot.org/uniprotkb/Q9SZ65" } ], "reference": [ { "type": "PubMed", "id": "10617198", "url": "https://glygen.org/publication/PubMed/10617198" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": 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[ "Protein Classification" ] }, { "id": "PTHR31111", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31111", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR31111:SF136", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31111:SF136", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00646", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00646", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF07734", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF07734", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PR:Q9SZ95", "url": "https://proconsortium.org/cgi-bin/entry_pro?id=PR:Q9SZ95", "database": "PRO", "categories": [ "Protein" ] }, { "id": "AT4G09790", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT4G09790", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { 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"MTTICDLPRDLVARILSRVPLTSMRRVRFTCKRWNTISKDPSFAKTHFGKAARQFIMMSQSRVSLMSVKLHGDGNEDELADPYIYEGYRLDVYALGYDKNLKNHKILRFVDSYEPAVKHSIIEHEIFDLKSNAWRVLDATPDWEIDSYQRGVSLKGNTYFFAKEKIVVEGDDVVVIEDFKDFLICFDFTSERFNLDHVCLYRFTLTMERPVREEQLAVLYQQDTCLMEIWVTNKIEPDVVSWSKVFLAVDMEPLTGSFIPFAFFAGSFFIDEEKKIAVVFDKDQEEINDRAYLIGENGYYKEVDLGYMNGYYQQQVDPRGPDPVFPLVCSYSPSLVTIPQGTRGKRKERDY", "length": 351, "header": "sp|Q9SZ95-1|FB224_ARATH Isoform 1 of Putative F-box protein At4g09790 OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9SZ95-1" }, "locus": {} } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "1999", "authors": "Mayer K, Sch\u00fcller C, Wambutt R, Murphy G, Volckaert G, Pohl T, D\u00fcsterh\u00f6ft A, Stiekema W, Entian K D, Terryn N, Harris B, Ansorge W, Brandt P, Grivell L, Rieger M, Weichselgartner M, de Simone V, Obermaier B, Mache R, 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J, Berghoff A, Jones K, Drone K, Cotton M, Joshu C, Antonoiu B, Zidanic M, Strong C, Sun H, Lamar B, Yordan C, Ma P, Zhong J, Preston R, Vil D, Shekher M, Matero A, Shah R, Swaby I K, O'Shaughnessy A, Rodriguez M, Hoffmann J, Till S, Granat S, Shohdy N, Hasegawa A, Hameed A, Lodhi M, Johnson A, Chen E, Marra M, Martienssen R, McCombie W R", "evidence": [ { "database": "UniProtKB", "id": "Q9SZ95", "url": "https://www.uniprot.org/uniprotkb/Q9SZ95" } ], "reference": [ { "type": "PubMed", "id": "10617198", "url": "https://glygen.org/publication/PubMed/10617198" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9SZ95", "url": "https://www.uniprot.org/uniprotkb/Q9SZ95" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [], "orthologs": [], "go_annotation": {}, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-Q9SZ95-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 351, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-Q9SZ95-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/Q9SZ95" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "Q9SZ95", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SZ95" }, { "id": "PRU00080", "database": "PROSITE", "url": "https://prosite.expasy.org/PRU00080" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "F-box", "eco_id": "ECO_0000255", "start_pos": 1, "end_pos": 51, "start_aa": 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{ "name": "Nuclear receptor family 2 group C protein", "type": "synonym", "evidence": [ { "id": "Q9SZ98", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SZ98/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9SZ98", "url": "https://www.uniprot.org/uniprotkb/Q9SZ98" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9SZ98", "locus": {} } ], "crossref": [ { "id": "826572", "url": "https://www.ncbi.nlm.nih.gov/gene/826572", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "Q9SZ98", "url": "https://www.ebi.ac.uk/intact/interactors/id:Q9SZ98*", "database": "IntAct", "categories": [ "Other" ] }, { "id": "IPR016549", "url": "https://www.ebi.ac.uk/interpro/entry/IPR016549", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT4G09830", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT4G09830", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "NELECCI", "url": "https://omabrowser.org/oma/group/NELECCI/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "Q9SZ98", "url": "https://www.orthodb.org/?gene=Q9SZ98", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR33675", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR33675", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR33675:SF10", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR33675:SF10", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "AT4G09830", "url": 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"Protein" ] } ], "sequence": { "sequence": "MEESINQNHEAMEALISNLFGNISSLKSAYIELQSAHTPYDPEKIQAADKVVNSELKNLSEMKHSYRENNPKPVCVSPQDSRLAAEIQEQQSLLKTYYEVMVKKFQSEIQNKDSEITQMLQKIEEANKKRLKLEKNLKLRGMSTNEGSGGDGNLQFPDLTTELFVSTYEVAAKAVHDFSKPLINMMKAAGWDLDSAANSIEPDVVYAKRPHKKYAFESYICQRMFSGFQQKNFSVNSESATVMADDDTDTFFRQFLALKDMDPLDALGTNPDSNVRLYACQKVFVIVGLTVI", "length": 292, "header": "tr|Q9SZA9-1|Q9SZA9_ARATH Isoform 1 of Myosin-4 protein (DUF641) OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9SZA9-1" }, "isoforms": [ { "isoform_ac": "Q9SZA9-1", "url": "https://www.uniprot.org/uniprotkb/Q9SZA9/entry", "sequence": { "sequence": "MEESINQNHEAMEALISNLFGNISSLKSAYIELQSAHTPYDPEKIQAADKVVNSELKNLSEMKHSYRENNPKPVCVSPQDSRLAAEIQEQQSLLKTYYEVMVKKFQSEIQNKDSEITQMLQKIEEANKKRLKLEKNLKLRGMSTNEGSGGDGNLQFPDLTTELFVSTYEVAAKAVHDFSKPLINMMKAAGWDLDSAANSIEPDVVYAKRPHKKYAFESYICQRMFSGFQQKNFSVNSESATVMADDDTDTFFRQFLALKDMDPLDALGTNPDSNVRLYACQKVFVIVGLTVI", "length": 292, "header": "tr|Q9SZA9-1|Q9SZA9_ARATH Isoform 1 of Myosin-4 protein (DUF641) OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9SZA9-1" }, "locus": { "chromosome": "4", "start_pos": 16057038, "end_pos": 16057916, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT4G33320.1", "url": "https://www.ensemblgenomes.org/id/AT4G33320.1" }, { "database": "Ensembl Peptide", "id": "AT4G33320.1", "url": "https://www.ensemblgenomes.org/id/AT4G33320.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "1999", "authors": "Mayer K, Sch\u00fcller C, Wambutt R, Murphy G, Volckaert G, Pohl T, D\u00fcsterh\u00f6ft A, Stiekema W, Entian K D, Terryn N, Harris B, Ansorge W, Brandt P, Grivell L, Rieger M, Weichselgartner M, de Simone V, Obermaier B, Mache R, M\u00fcller M, Kreis M, Delseny M, Puigdomenech P, Watson M, Schmidtheini T, Reichert B, Portatelle D, Perez-Alonso M, Boutry M, Bancroft I, Vos P, Hoheisel J, Zimmermann W, Wedler H, Ridley P, Langham S A, McCullagh B, Bilham L, Robben J, Van der Schueren J, Grymonprez B, Chuang Y J, Vandenbussche F, Braeken M, Weltjens I, Voet M, Bastiaens I, Aert R, Defoor E, Weitzenegger T, Bothe G, Ramsperger U, Hilbert H, Braun M, Holzer E, Brandt A, Peters S, van Staveren M, Dirske W, Mooijman P, Klein Lankhorst R, Rose M, Hauf J, K\u00f6tter P, Berneiser S, Hempel S, Feldpausch M, Lamberth S, Van den Daele H, De Keyser A, Buysshaert C, Gielen J, Villarroel R, De Clercq R, Van Montagu M, Rogers J, Cronin A, Quail M, Bray-Allen S, Clark L, Doggett J, Hall S, Kay M, Lennard N, McLay K, Mayes R, Pettett A, Rajandream M A, Lyne M, Benes V, Rechmann S, Borkova D, Bl\u00f6cker H, Scharfe M, Grimm M, L\u00f6hnert T H, Dose S, de Haan M, Maarse A, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Fartmann B, Granderath K, Dauner D, Herzl A, Neumann S, Argiriou A, Vitale D, Liguori R, Piravandi E, Massenet O, Quigley 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J, Preston R, Vil D, Shekher M, Matero A, Shah R, Swaby I K, O'Shaughnessy A, Rodriguez M, Hoffmann J, Till S, Granat S, Shohdy N, Hasegawa A, Hameed A, Lodhi M, Johnson A, Chen E, Marra M, Martienssen R, McCombie W R", "evidence": [ { "database": "UniProtKB", "id": "Q9SZA9", "url": "https://www.uniprot.org/uniprotkb/Q9SZA9" } ], "reference": [ { "type": "PubMed", "id": "10617198", "url": "https://glygen.org/publication/PubMed/10617198" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9SZA9", "url": "https://www.uniprot.org/uniprotkb/Q9SZA9" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT4G33320", "name": "", "url": 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"database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SZD3/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9SZD3", "url": "https://www.uniprot.org/uniprotkb/Q9SZD3" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9SZD3", "locus": {} } ], "crossref": [ { "id": "829024", "url": "https://www.ncbi.nlm.nih.gov/gene/829024", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "ath:AT4G29030", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT4G29030", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "KWFFTIF", "url": "https://omabrowser.org/oma/group/KWFFTIF/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "Q9SZD3", "url": "https://www.orthodb.org/?gene=Q9SZD3", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR34463", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR34463", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR34463:SF11", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR34463:SF11", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "AT4G29030", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT4G29030", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9SZD3", "url": "https://www.uniprot.org/uniprotkb/Q9SZD3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9SZD3-1", "url": "https://www.uniprot.org/uniprotkb/Q9SZD3-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": 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"https://glygen.org/publication/PubMed/10617198" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9SZD3", "url": "https://www.uniprot.org/uniprotkb/Q9SZD3" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT4G29030", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT4G29030", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": {}, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [], "binding_sites": [], 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"id": "ath:AT4G29090", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT4G29090", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "EWSWIPR", "url": "https://omabrowser.org/oma/group/EWSWIPR/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR47074", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR47074", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR47074:SF48", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR47074:SF48", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF13456", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF13456", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF13966", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF13966", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "AT4G29090", "url": 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"MALPTYTMACFLLPKTVCKQIISVLADFWWRNKQEAKGMHWKAWDHLSCYKAEGGIGFKDIEAFNLALLGKQMWRMLSRPESLMAKVFKSRYFHKSDPLNAPLGSRPSFVWKSIHASQEILRQGARAVVGNGEDIIIWRHKWLDSKPASAALRMQRVPPQEYASVSSILKVSDLIDESGREWRKDVIEMLFPEVERKLIGELRPGGRRILDSYTWDYTSSGDYTVKSGYWVLTQIINKRSSPQEVSEPSLNPIYQKIWKSQTSPKIQHFLWKCLSNSLPVAGALAYRHLSKESACIRCPSCKETVNHLLFKCTFARLTWAISSIPIPLGGEWADSIYVNLYWVFNLGNGNPQWEKASQLVPWLLWRLWKNRNELVFRGREFNAQEVLRRAEDDLEEWRIRTEAESCGTKPQVNRSSCGRWRPPPHQWVKCNTDATWNRDNERCGIGWVLRNEKGEVKWMGARALPKLKSVLEAELEAMRWAVLSLSRFQYNYVIFESDSQVLIEILNNDEIWPSLKPTIQDLQRLLSQFTEVKFVFIPREGNTLAERVARESLSFLNYDPKLYSIVPSWARSSMD", "length": 575, "header": "tr|Q9SZD8-1|Q9SZD8_ARATH Isoform 1 of Ribonuclease H-like superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9SZD8-1" }, "isoforms": [ { "isoform_ac": "Q9SZD8-1", "url": "https://www.uniprot.org/uniprotkb/Q9SZD8/entry", "sequence": { "sequence": 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"categories": [ "Protein" ] } ], "sequence": { "sequence": "MGSHLSKQLERRKAISTEKKALTDLEKSCGCEFPGCDYMPSDRKNWMAGVGPEKLHINKIVWPGTHDSATNKIGIRFVSRPFAKCQSLSIYNQLVAGTRVLDIRVQEDRRVCHGILKTYSVDVVLADLKRFLSETESEIVILEIRTEFGHEDPPEFDKYLVEQLGEHLIHQDDHVFSKTVAELLPKRVICVWKPRKSPQPKHGDPLWSAGYLKDNWIDTDLPSTKFESNIKHLSQQQPATSRKFFYRVENTVTPQPDNPIMCVKPVTKRIHCYAKVFIIECVKRGCADKLQIFSTDFIDNEFVDACVGLTFARAEGKA", "length": 318, "header": "tr|Q9SZP6-1|Q9SZP6_ARATH Isoform 1 of PLC-like phosphodiesterases superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SZP6-1" }, "isoforms": [ { "isoform_ac": "Q9SZP6-1", "url": "https://www.uniprot.org/uniprotkb/Q9SZP6/entry", "sequence": { "sequence": "MGSHLSKQLERRKAISTEKKALTDLEKSCGCEFPGCDYMPSDRKNWMAGVGPEKLHINKIVWPGTHDSATNKIGIRFVSRPFAKCQSLSIYNQLVAGTRVLDIRVQEDRRVCHGILKTYSVDVVLADLKRFLSETESEIVILEIRTEFGHEDPPEFDKYLVEQLGEHLIHQDDHVFSKTVAELLPKRVICVWKPRKSPQPKHGDPLWSAGYLKDNWIDTDLPSTKFESNIKHLSQQQPATSRKFFYRVENTVTPQPDNPIMCVKPVTKRIHCYAKVFIIECVKRGCADKLQIFSTDFIDNEFVDACVGLTFARAEGKA", "length": 318, "header": "tr|Q9SZP6-1|Q9SZP6_ARATH Isoform 1 of PLC-like phosphodiesterases superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SZP6-1" }, "locus": { "chromosome": "4", "start_pos": 18074320, "end_pos": 18075957, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT4G38690.1", "url": "https://www.ensemblgenomes.org/id/AT4G38690.1" }, { "database": "Ensembl Peptide", "id": "AT4G38690.1", "url": "https://www.ensemblgenomes.org/id/AT4G38690.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "1999", "authors": "Mayer K, Sch\u00fcller C, Wambutt R, Murphy G, Volckaert G, Pohl T, D\u00fcsterh\u00f6ft A, Stiekema W, Entian K D, Terryn N, Harris B, Ansorge W, Brandt P, Grivell L, Rieger M, Weichselgartner M, de Simone V, Obermaier B, Mache R, M\u00fcller M, Kreis M, Delseny M, Puigdomenech P, Watson M, Schmidtheini T, Reichert B, Portatelle D, Perez-Alonso M, Boutry M, Bancroft I, Vos P, Hoheisel J, Zimmermann W, Wedler H, Ridley P, Langham S A, McCullagh B, Bilham L, Robben J, Van der Schueren J, Grymonprez B, Chuang Y J, Vandenbussche F, Braeken M, Weltjens I, Voet M, Bastiaens I, Aert R, Defoor E, Weitzenegger T, Bothe G, Ramsperger U, Hilbert H, Braun M, Holzer E, Brandt A, Peters S, van Staveren M, Dirske W, Mooijman P, Klein Lankhorst R, Rose M, Hauf J, K\u00f6tter P, Berneiser S, Hempel S, Feldpausch M, Lamberth S, Van den Daele H, De Keyser A, Buysshaert C, Gielen J, Villarroel R, De Clercq R, Van Montagu M, Rogers J, Cronin A, Quail M, Bray-Allen S, Clark L, Doggett J, Hall S, Kay M, Lennard N, McLay K, Mayes R, Pettett A, Rajandream M A, Lyne M, Benes V, Rechmann S, Borkova D, Bl\u00f6cker H, Scharfe M, Grimm M, L\u00f6hnert T H, Dose S, de Haan M, Maarse A, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Fartmann B, Granderath K, Dauner D, Herzl A, Neumann S, Argiriou A, Vitale D, Liguori R, Piravandi E, Massenet O, Quigley F, Clabauld G, M\u00fcndlein A, Felber R, Schnabl S, Hiller R, Schmidt W, Lecharny A, Aubourg S, Chefdor F, Cooke R, Berger C, Montfort A, Casacuberta E, Gibbons T, Weber N, Vandenbol M, Bargues M, Terol J, Torres A, Perez-Perez A, Purnelle B, Bent E, Johnson S, Tacon D, Jesse T, Heijnen L, Schwarz S, Scholler P, Heber S, Francs P, Bielke C, Frishman D, Haase D, Lemcke K, Mewes H W, Stocker S, Zaccaria P, Bevan M, Wilson R K, de la Bastide M, Habermann K, Parnell L, Dedhia N, Gnoj L, Schutz K, Huang E, Spiegel L, Sehkon M, Murray J, Sheet P, Cordes M, Abu-Threideh J, Stoneking T, Kalicki J, Graves T, Harmon G, Edwards J, Latreille P, Courtney L, Cloud J, Abbott A, Scott K, Johnson D, Minx P, Bentley D, Fulton B, Miller N, Greco T, Kemp K, Kramer J, Fulton L, Mardis E, Dante M, Pepin K, Hillier L, Nelson J, Spieth J, Ryan E, Andrews S, Geisel C, Layman D, Du H, Ali J, Berghoff A, Jones K, Drone K, Cotton M, Joshu C, Antonoiu B, Zidanic M, Strong C, Sun H, Lamar B, Yordan C, Ma P, Zhong J, Preston R, Vil D, Shekher M, Matero A, Shah R, Swaby I K, O'Shaughnessy A, Rodriguez M, Hoffmann J, Till S, Granat S, Shohdy N, Hasegawa A, Hameed A, Lodhi M, Johnson A, Chen E, Marra M, Martienssen R, McCombie W R", "evidence": [ { "database": "UniProtKB", "id": "Q9SZP6", "url": "https://www.uniprot.org/uniprotkb/Q9SZP6" } ], "reference": [ { "type": "PubMed", "id": "10617198", "url": "https://glygen.org/publication/PubMed/10617198" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9SZP6", "url": "https://www.uniprot.org/uniprotkb/Q9SZP6" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT4G38690", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT4G38690", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "extracellular region", "id": "GO:0005576", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005576", "evidence": [ { "database": "UniProtKB", "id": "Q9SZP6", "url": "https://www.uniprot.org/uniprotkb/Q9SZP6" } ], "pmid": "" }, { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": 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"length": 1211, "header": "tr|Q9SZQ2-1|Q9SZQ2_ARATH Isoform 1 of Serine/arginine repetitive matrix protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SZQ2-1" }, "locus": { "chromosome": "4", "start_pos": 14582791, "end_pos": 14590575, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT4G29790.1", "url": "https://www.ensemblgenomes.org/id/AT4G29790.1" }, { "database": "Ensembl Peptide", "id": "AT4G29790.1", "url": "https://www.ensemblgenomes.org/id/AT4G29790.1" } ] } } ], "glycosylation": [], "phosphorylation": [ { "start_pos": 331, "end_pos": 331, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SZQ2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SZQ2" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ], "site_lbl": "Ser331" }, { "start_pos": 386, "end_pos": 386, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SZQ2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SZQ2" }, { "database": "PubMed", "id": "23328941", "url": "https://glygen.org/publication/PubMed/23328941" } ], "site_lbl": "Ser386" }, { "start_pos": 387, "end_pos": 387, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SZQ2", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SZQ2" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ], "site_lbl": "Ser387" }, { "start_pos": 452, "end_pos": 452, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", 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"name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT4G29870", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A4X1UWE1-1", "protein_name": "Oligosaccharyltransferase complex subunit", "gene_name": "OSTC", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "METLYRVPFLVLECPNLKLKKPPWVHMPSAMTVYALVVVSYFLITGGIIYDVIVEPPSVGSMTDEHGHQRPVAFLAYRVNGQYIMEGLASSFLFTMGGLGFIILDRSNAPNIPKLNRFLLLFIGFVCVLLSFFMARVFMRMKLPGYLMG", "length": 149 }, "evidence": [ { "id": "Q9SZQ8", "url": "https://omabrowser.org/oma/group/Q9SZQ8/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8C2LXK8-1", "protein_name": "Oligosaccharyltransferase complex subunit", "gene_name": "Ostc", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "METLYRVPFLVLECPNLKLKKPPWVHMPSAMTVYALVVVSYFLITGGIIYDVIVEPPSVGSMTDEHGHQRPVAFLAYRVNGQYIMEGLASSFLFTMGGLGFIILDRSNAPNIPKLNRFLLLFIGFVCVLLSFFMARVFMRMKLPGYLMG", 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"http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31111:SF78", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00646", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00646", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF08268", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF08268", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PR:Q9SZR7", "url": "https://proconsortium.org/cgi-bin/entry_pro?id=PR:Q9SZR7", "database": "PRO", "categories": [ "Protein" ] }, { "id": "AT4G29970", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT4G29970", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9SZR7", "url": "https://www.uniprot.org/uniprotkb/Q9SZR7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9SZR7-1", "url": "https://www.uniprot.org/uniprotkb/Q9SZR7-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MDKKQDQSEENDLFSNIPLELMIEILLKLPAKSIANLIFVSKHWSSIILDKDITELYLTRSSTLPRLLFQVSVSRLKMQFLHSSSLEGPSCDHHRVAVTLNHDLEYRFSPPVRGLICCLNDDIRIIRTEEHQVFTLGAKQEWRMIESRINHKLLSLISFNLRSEEFNVIKFPKDVKHIWSSNLVNYNGKIALTSYSCNGTLDLWVMKDDASKQEWFKDTLSTGELIFAPCFITDPFFFICYDLKEKSARKVVIEGLGDDYVNVSLDHVESPMFLPKVCLSDDD", "length": 283, "header": "sp|Q9SZR7-1|FB247_ARATH Isoform 1 of Putative F-box protein At4g29970 OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9SZR7-1" }, "isoforms": [ { "isoform_ac": "Q9SZR7-1", "url": "https://www.uniprot.org/uniprotkb/Q9SZR7/entry#Q9SZR7-1", "sequence": { "sequence": "MDKKQDQSEENDLFSNIPLELMIEILLKLPAKSIANLIFVSKHWSSIILDKDITELYLTRSSTLPRLLFQVSVSRLKMQFLHSSSLEGPSCDHHRVAVTLNHDLEYRFSPPVRGLICCLNDDIRIIRTEEHQVFTLGAKQEWRMIESRINHKLLSLISFNLRSEEFNVIKFPKDVKHIWSSNLVNYNGKIALTSYSCNGTLDLWVMKDDASKQEWFKDTLSTGELIFAPCFITDPFFFICYDLKEKSARKVVIEGLGDDYVNVSLDHVESPMFLPKVCLSDDD", "length": 283, "header": "sp|Q9SZR7-1|FB247_ARATH Isoform 1 of 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Portatelle D, Perez-Alonso M, Boutry M, Bancroft I, Vos P, Hoheisel J, Zimmermann W, Wedler H, Ridley P, Langham S A, McCullagh B, Bilham L, Robben J, Van der Schueren J, Grymonprez B, Chuang Y J, Vandenbussche F, Braeken M, Weltjens I, Voet M, Bastiaens I, Aert R, Defoor E, Weitzenegger T, Bothe G, Ramsperger U, Hilbert H, Braun M, Holzer E, Brandt A, Peters S, van Staveren M, Dirske W, Mooijman P, Klein Lankhorst R, Rose M, Hauf J, K\u00f6tter P, Berneiser S, Hempel S, Feldpausch M, Lamberth S, Van den Daele H, De Keyser A, Buysshaert C, Gielen J, Villarroel R, De Clercq R, Van Montagu M, Rogers J, Cronin A, Quail M, Bray-Allen S, Clark L, Doggett J, Hall S, Kay M, Lennard N, McLay K, Mayes R, Pettett A, Rajandream M A, Lyne M, Benes V, Rechmann S, Borkova D, Bl\u00f6cker H, Scharfe M, Grimm M, L\u00f6hnert T H, Dose S, de Haan M, Maarse A, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Fartmann B, Granderath K, Dauner D, Herzl A, Neumann S, Argiriou A, Vitale D, Liguori R, 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"url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF05903", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "AT4G25680", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT4G25680", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9SZZ6", "url": "https://www.uniprot.org/uniprotkb/Q9SZZ6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9SZZ6-1", "url": "https://www.uniprot.org/uniprotkb/Q9SZZ6-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MTEVVLHIYDVTNSGSEKTNNTIVQINRFFKDGIGLGGIFHSAIQVYGNDEWSYGYCELGTGVFSCPSGKNPMYTYREKIVLGKTDCTIFMVNQMLRELSREWPGHTYDLLSKNCNHFCDVLCDRLGVPKIPGWVNRFANAGDTALEVAGNTAMRMKQAKTELVSASKVAYRFLSNVTSNVTNGSNGSPQRPGTLNNSDSGNLRLQGSWLKGLLNTAKPSTSTEIGNKDEDANHAVTNQKKQSRDSDVLLFQ", "length": 252, "header": "tr|Q9SZZ6-1|Q9SZZ6_ARATH Isoform 1 of PPPDE putative thiol peptidase family protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SZZ6-1" }, "isoforms": [ { "isoform_ac": "Q9SZZ6-1", "url": "https://www.uniprot.org/uniprotkb/Q9SZZ6/entry", "sequence": { "sequence": "MTEVVLHIYDVTNSGSEKTNNTIVQINRFFKDGIGLGGIFHSAIQVYGNDEWSYGYCELGTGVFSCPSGKNPMYTYREKIVLGKTDCTIFMVNQMLRELSREWPGHTYDLLSKNCNHFCDVLCDRLGVPKIPGWVNRFANAGDTALEVAGNTAMRMKQAKTELVSASKVAYRFLSNVTSNVTNGSNGSPQRPGTLNNSDSGNLRLQGSWLKGLLNTAKPSTSTEIGNKDEDANHAVTNQKKQSRDSDVLLFQ", "length": 252, "header": "tr|Q9SZZ6-1|Q9SZZ6_ARATH Isoform 1 of PPPDE putative thiol peptidase family protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SZZ6-1" }, "locus": { "chromosome": "4", "start_pos": 13087973, "end_pos": 13090161, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT4G25680.1", "url": "https://www.ensemblgenomes.org/id/AT4G25680.1" }, { "database": "Ensembl Peptide", "id": "AT4G25680.1", "url": "https://www.ensemblgenomes.org/id/AT4G25680.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "1999", "authors": "Mayer K, Sch\u00fcller C, Wambutt R, Murphy G, Volckaert G, Pohl T, D\u00fcsterh\u00f6ft A, Stiekema W, Entian K D, Terryn N, Harris B, Ansorge W, Brandt P, Grivell L, Rieger M, Weichselgartner M, de Simone V, Obermaier B, Mache R, M\u00fcller M, Kreis M, Delseny M, Puigdomenech P, Watson M, Schmidtheini T, Reichert B, Portatelle D, Perez-Alonso M, Boutry M, Bancroft I, Vos P, Hoheisel J, Zimmermann W, Wedler H, Ridley P, Langham S A, McCullagh B, Bilham L, Robben J, Van der Schueren J, Grymonprez B, Chuang Y J, Vandenbussche F, Braeken M, Weltjens I, Voet M, Bastiaens I, Aert R, Defoor E, Weitzenegger T, Bothe G, Ramsperger U, Hilbert H, Braun M, Holzer E, Brandt A, Peters S, van Staveren M, Dirske W, Mooijman P, Klein Lankhorst R, Rose M, Hauf J, K\u00f6tter P, Berneiser S, Hempel S, Feldpausch M, Lamberth S, Van den Daele H, De Keyser A, Buysshaert C, Gielen J, Villarroel R, De Clercq R, Van Montagu M, Rogers J, Cronin A, Quail M, Bray-Allen S, Clark L, Doggett J, Hall S, Kay M, Lennard N, McLay K, Mayes R, Pettett A, Rajandream M A, Lyne M, Benes V, Rechmann S, Borkova D, Bl\u00f6cker H, Scharfe M, Grimm M, L\u00f6hnert T H, Dose S, de Haan M, Maarse A, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Fartmann B, Granderath K, Dauner D, Herzl A, Neumann S, Argiriou A, Vitale D, Liguori R, Piravandi E, Massenet O, Quigley F, Clabauld G, M\u00fcndlein A, Felber R, Schnabl S, Hiller R, Schmidt W, Lecharny A, Aubourg S, Chefdor F, Cooke R, Berger C, Montfort A, Casacuberta E, Gibbons T, Weber N, Vandenbol M, Bargues M, Terol J, Torres A, Perez-Perez A, Purnelle B, Bent E, Johnson S, Tacon D, Jesse T, Heijnen L, Schwarz S, Scholler P, Heber S, Francs P, Bielke C, Frishman D, Haase D, Lemcke K, Mewes H W, Stocker S, Zaccaria P, Bevan M, Wilson R K, de la Bastide M, Habermann K, Parnell L, Dedhia N, Gnoj L, 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reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9SZZ6", "url": "https://www.uniprot.org/uniprotkb/Q9SZZ6" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT4G25680", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT4G25680", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "Q9SZZ6", "url": "https://www.uniprot.org/uniprotkb/Q9SZZ6" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ 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"MDHTLCKQVVQPVTRKVKKHGKDEFDRIKQAEKKKRRLEKALATSAAIRAELEKKKQKRLEEQQRLDEEGAAIAEAVALHVLLGEDSDDSSRVKFGEETGFGMDLFRDERTNYVPRQSCASYAVQGIGFVSNGYGLGDSNWSVSYKPFMKDVWDNNMVISADLIAAQAVSSLQISEDADRNAYVFETMFGG", "length": 191, "header": "tr|Q9SZZ7-1|Q9SZZ7_ARATH Isoform 1 of Stress response NST1-like protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9SZZ7-1" }, "isoforms": [ { "isoform_ac": "Q9SZZ7-1", "url": "https://www.uniprot.org/uniprotkb/Q9SZZ7/entry", "sequence": { "sequence": "MDHTLCKQVVQPVTRKVKKHGKDEFDRIKQAEKKKRRLEKALATSAAIRAELEKKKQKRLEEQQRLDEEGAAIAEAVALHVLLGEDSDDSSRVKFGEETGFGMDLFRDERTNYVPRQSCASYAVQGIGFVSNGYGLGDSNWSVSYKPFMKDVWDNNMVISADLIAAQAVSSLQISEDADRNAYVFETMFGG", "length": 191, "header": "tr|Q9SZZ7-1|Q9SZZ7_ARATH Isoform 1 of Stress response NST1-like protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9SZZ7-1" }, "locus": { "chromosome": "4", "start_pos": 13090209, "end_pos": 13091798, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": 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"Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9T008", "url": "https://www.uniprot.org/uniprotkb/Q9T008" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT4G35210", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT4G35210", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "chloroplast", "id": "GO:0009507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009507", "evidence": [ { "database": "UniProtKB", "id": "Q9T008", "url": "https://www.uniprot.org/uniprotkb/Q9T008" } ], "pmid": "" } ] }, { "name": "Biological Process", 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in fine-tuning of cyclic electron flow (CEF).", "journal": "Proceedings of the National Academy of Sciences of the United States of America", "date": "2011-08-02", "authors": "Reiland Sonja, Finazzi Giovanni, Endler Anne, Willig Adrian, Baerenfaller Katja, Grossmann Jonas, Gerrits Bertran, Rutishauser Dorothea, Gruissem Wilhelm, Rochaix Jean-David, Baginsky Sacha", "evidence": [ { "database": "iPTMnet", "id": "Q9T023", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9T023" } ], "reference": [ { "type": "PubMed", "id": "21768351", "url": "https://glygen.org/publication/PubMed/21768351" } ] }, { "title": "Quantitative phosphoproteomics of the ataxia telangiectasia-mutated (ATM) and ataxia telangiectasia-mutated and rad3-related (ATR) dependent DNA damage response in Arabidopsis thaliana.", "journal": "Molecular & cellular proteomics : MCP", "date": "2015-03", "authors": "Roitinger Elisabeth, Hofer Manuel, K\u00f6cher Thomas, Pichler Peter, Novatchkova Maria, Yang Jianhua, 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Langham S A, McCullagh B, Bilham L, Robben J, Van der Schueren J, Grymonprez B, Chuang Y J, Vandenbussche F, Braeken M, Weltjens I, Voet M, Bastiaens I, Aert R, Defoor E, Weitzenegger T, Bothe G, Ramsperger U, Hilbert H, Braun M, Holzer E, Brandt A, Peters S, van Staveren M, Dirske W, Mooijman P, Klein Lankhorst R, Rose M, Hauf J, K\u00f6tter P, Berneiser S, Hempel S, Feldpausch M, Lamberth S, Van den Daele H, De Keyser A, Buysshaert C, Gielen J, Villarroel R, De Clercq R, Van Montagu M, Rogers J, Cronin A, Quail M, Bray-Allen S, Clark L, Doggett J, Hall S, Kay M, Lennard N, McLay K, Mayes R, Pettett A, Rajandream M A, Lyne M, Benes V, Rechmann S, Borkova D, Bl\u00f6cker H, Scharfe M, Grimm M, L\u00f6hnert T H, Dose S, de Haan M, Maarse A, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Fartmann B, Granderath K, Dauner D, Herzl A, Neumann S, Argiriou A, Vitale D, Liguori R, Piravandi E, Massenet O, Quigley F, Clabauld G, M\u00fcndlein A, Felber R, Schnabl S, Hiller R, Schmidt W, Lecharny A, Aubourg S, Chefdor F, Cooke R, Berger C, Montfort A, Casacuberta E, Gibbons T, Weber N, Vandenbol M, Bargues M, Terol J, Torres A, Perez-Perez A, Purnelle B, Bent E, Johnson S, Tacon D, Jesse T, Heijnen L, Schwarz S, Scholler P, Heber S, Francs P, Bielke C, Frishman D, Haase D, Lemcke K, Mewes H W, Stocker S, Zaccaria P, Bevan M, Wilson R K, de la Bastide M, Habermann K, Parnell L, Dedhia N, Gnoj L, Schutz K, Huang E, Spiegel L, Sehkon M, Murray J, Sheet P, Cordes M, Abu-Threideh J, Stoneking T, Kalicki J, Graves T, Harmon G, Edwards J, Latreille P, Courtney L, Cloud J, Abbott A, Scott K, Johnson D, Minx P, Bentley D, Fulton B, Miller N, Greco T, Kemp K, Kramer J, Fulton L, Mardis E, Dante M, Pepin K, Hillier L, Nelson J, Spieth J, Ryan E, Andrews S, Geisel C, Layman D, Du H, Ali J, Berghoff A, Jones K, Drone K, Cotton M, Joshu C, Antonoiu B, Zidanic M, Strong C, Sun H, Lamar B, Yordan C, Ma P, Zhong J, Preston R, Vil D, Shekher M, Matero A, Shah R, Swaby I K, O'Shaughnessy A, Rodriguez M, Hoffmann J, Till S, Granat S, Shohdy N, Hasegawa A, Hameed A, Lodhi M, Johnson A, Chen E, Marra M, Martienssen R, McCombie W R", "evidence": [ { "database": "UniProtKB", "id": "Q9T024", "url": "https://www.uniprot.org/uniprotkb/Q9T024" } ], "reference": [ { "type": "PubMed", "id": "10617198", "url": "https://glygen.org/publication/PubMed/10617198" } ] }, { "title": "Large-scale phosphorylation mapping reveals the extent of tyrosine phosphorylation in Arabidopsis.", "journal": "Molecular systems biology", "date": "2008", "authors": "Sugiyama Naoyuki, Nakagami Hirofumi, Mochida Keiichi, Daudi Arsalan, Tomita Masaru, Shirasu Ken, Ishihama Yasushi", "evidence": [ { "database": "iPTMnet", "id": "Q9T024", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9T024" } ], "reference": [ { "type": "PubMed", "id": "18463617", "url": "https://glygen.org/publication/PubMed/18463617" } ] }, { "title": "Large-scale comparative phosphoproteomics identifies conserved phosphorylation sites in plants.", "journal": "Plant physiology", "date": "2010-07", "authors": "Nakagami Hirofumi, Sugiyama Naoyuki, Mochida Keiichi, Daudi Arsalan, Yoshida Yuko, Toyoda Tetsuro, Tomita Masaru, Ishihama Yasushi, Shirasu Ken", "evidence": [ { "database": "iPTMnet", "id": "Q9T024", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9T024" } ], "reference": [ { "type": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" } ] }, { "title": "Quantitative phosphoproteome profiling of iron-deficient Arabidopsis roots.", "journal": "Plant physiology", "date": "2012-05", "authors": "Lan Ping, Li Wenfeng, Wen Tuan-Nan, Schmidt Wolfgang", "evidence": [ { "database": "iPTMnet", "id": "Q9T024", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9T024" } ], "reference": [ { "type": "PubMed", "id": "22438062", "url": "https://glygen.org/publication/PubMed/22438062" } ] }, { "title": "Quantitative phosphoproteomics of the ataxia telangiectasia-mutated (ATM) and ataxia telangiectasia-mutated and rad3-related (ATR) dependent DNA damage response in Arabidopsis thaliana.", "journal": "Molecular & cellular proteomics : MCP", "date": "2015-03", "authors": "Roitinger Elisabeth, Hofer Manuel, K\u00f6cher Thomas, Pichler Peter, Novatchkova Maria, Yang Jianhua, Schl\u00f6gelhofer Peter, Mechtler Karl", "evidence": [ { "database": "iPTMnet", "id": "Q9T024", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9T024" } ], "reference": [ { "type": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] }, { "title": "Early nitrogen-deprivation responses in Arabidopsis roots reveal distinct differences on transcriptome and (phospho-) proteome levels between nitrate and ammonium nutrition.", "journal": "The Plant journal : for cell and molecular biology", "date": "2016-12", "authors": "Menz Jochen, Li Zhi, Schulze Waltraud X, Ludewig Uwe", "evidence": [ { "database": "iPTMnet", "id": "Q9T024", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9T024" } ], "reference": [ { "type": "PubMed", "id": "27419465", "url": "https://glygen.org/publication/PubMed/27419465" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9T024", "url": "https://www.uniprot.org/uniprotkb/Q9T024" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] }, { "title": "Capturing the phosphorylation and protein interaction landscape of the plant TOR kinase.", "journal": "Nature plants", "date": "2019-03", "authors": "Van Leene Jelle, Han Chao, Gadeyne Astrid, Eeckhout Dominique, Matthijs Caroline, Cannoot Bernard, De Winne Nancy, Persiau Geert, Van De Slijke 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"field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 8 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "Q9T028-1", "uniprot_ac": "Q9T028", "uniprot_id": "Q9T028_ARATH", "mass": { "chemical_mass": 31817.0, "monoisotopic_mass": 31817.0 }, "refseq": {}, "gene_names": [ { "name": "T22F8.90", "type": "synonym", "evidence": [ { "id": "Q9T028", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9T028" } ] }, { "name": "T22F8_90", "type": "synonym", "evidence": [ { "id": "Q9T028", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9T028" } ] } ], "protein_names": [ { "name": "Nucleolar-like protein", "type": "synonym", "evidence": [ { "id": 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"https://www.genome.jp/dbget-bin/www_bget?ath:AT4G39190", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "FFWAIEI", "url": "https://omabrowser.org/oma/group/FFWAIEI/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR33640", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR33640", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR33640:SF13", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR33640:SF13", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "AT4G39190", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT4G39190", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9T028", "url": "https://www.uniprot.org/uniprotkb/Q9T028", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9T028-1", "url": "https://www.uniprot.org/uniprotkb/Q9T028-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MDSFSTQKPKSRKMKKRLAKKSRVEIILDLFFRAIEIVVVLVTLAKLSYELVVTFEDSSVASVILANRSLAFVIGNAIVIALIAKSGILLNQEHDPKCKSNDLYEDFVLESSRRGGFSQDEMRSGEKQSEAENEAKQSITENKAKENEEKQSITESRVKKSVTEKKTKRIISEKKVKQSKPEKLTKQSTSVNREKQSEVEHKDITMTIEKQNLTEKRQIQSYQRSKSENLKVLEKSSCGRLKRSETDASAERFDSDDELRYKIESFIARQRRNQTDE", "length": 277, "header": "tr|Q9T028-1|Q9T028_ARATH Isoform 1 of Nucleolar-like protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9T028-1" }, "isoforms": [ { "isoform_ac": "Q9T028-1", "url": "https://www.uniprot.org/uniprotkb/Q9T028/entry", "sequence": { "sequence": "MDSFSTQKPKSRKMKKRLAKKSRVEIILDLFFRAIEIVVVLVTLAKLSYELVVTFEDSSVASVILANRSLAFVIGNAIVIALIAKSGILLNQEHDPKCKSNDLYEDFVLESSRRGGFSQDEMRSGEKQSEAENEAKQSITENKAKENEEKQSITESRVKKSVTEKKTKRIISEKKVKQSKPEKLTKQSTSVNREKQSEVEHKDITMTIEKQNLTEKRQIQSYQRSKSENLKVLEKSSCGRLKRSETDASAERFDSDDELRYKIESFIARQRRNQTDE", "length": 277, "header": "tr|Q9T028-1|Q9T028_ARATH Isoform 1 of Nucleolar-like protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9T028-1" }, "locus": { "chromosome": "4", "start_pos": 18251811, "end_pos": 18253216, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT4G39190.1", "url": "https://www.ensemblgenomes.org/id/AT4G39190.1" }, { "database": "Ensembl Peptide", "id": "AT4G39190.1", "url": "https://www.ensemblgenomes.org/id/AT4G39190.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "1999", "authors": "Mayer K, Sch\u00fcller C, Wambutt R, Murphy G, Volckaert G, Pohl T, D\u00fcsterh\u00f6ft A, Stiekema W, Entian K D, Terryn N, Harris B, Ansorge W, Brandt P, Grivell L, Rieger M, Weichselgartner M, de Simone V, Obermaier B, Mache R, M\u00fcller M, Kreis M, Delseny M, Puigdomenech P, Watson M, Schmidtheini T, Reichert B, Portatelle D, Perez-Alonso M, 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J, Preston R, Vil D, Shekher M, Matero A, Shah R, Swaby I K, O'Shaughnessy A, Rodriguez M, Hoffmann J, Till S, Granat S, Shohdy N, Hasegawa A, Hameed A, Lodhi M, Johnson A, Chen E, Marra M, Martienssen R, McCombie W R", "evidence": [ { "database": "UniProtKB", "id": "Q9T028", "url": "https://www.uniprot.org/uniprotkb/Q9T028" } ], "reference": [ { "type": "PubMed", "id": "10617198", "url": "https://glygen.org/publication/PubMed/10617198" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9T028", "url": "https://www.uniprot.org/uniprotkb/Q9T028" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT4G39190", "name": "", "url": 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Classification" ] }, { "id": "Q9T035", "url": "https://www.orthodb.org/?gene=Q9T035", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR24414", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24414", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR24414:SF184", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24414:SF184", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00646", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00646", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF25210", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF25210", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PR:Q9T035", "url": "https://proconsortium.org/cgi-bin/entry_pro?id=PR:Q9T035", "database": "PRO", "categories": [ "Protein" ] }, { "id": "AT4G39290", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT4G39290", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9T035", "url": "https://www.uniprot.org/uniprotkb/Q9T035", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9T035-1", "url": "https://www.uniprot.org/uniprotkb/Q9T035-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MLMSKEDESQMTFSMLPDDLVLNCLARVSKVYYPSLSFVSKKFRSLIASTELQELRSFLGCTSSGLYVCLRFRTNTDYRQICFTLRQKISSSAKILVPISSLDSPFDYRSGVVAVGSDIYAIGGRNLNNSASSKVMVMDCRSHTWREAPSMRVARDDFPSTCVLNGKIYVIGGCKNLDSTNWIEVFDTKTQTWEFLQIPNEEVCRGFNYKIVGYKEAIHVSSLENNRATFMTYEIHKGRWREPHLSLSHGFHFSNCVIENVFYRYSYEMLQWYDSCRKIWKNLKGFVRRSIMNPRGEGVKMVNYGGNIVLLWEECVTIKKKLIWCEEVVIEKKHQGEIWGLLKWSDVVFITDEKNQLVRALAPDV", "length": 365, "header": "sp|Q9T035-1|FBK97_ARATH Isoform 1 of Putative F-box/kelch-repeat protein At4g39290 OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9T035-1" }, "isoforms": [ { "isoform_ac": "Q9T035-1", "url": "https://www.uniprot.org/uniprotkb/Q9T035/entry#Q9T035-1", "sequence": { "sequence": "MLMSKEDESQMTFSMLPDDLVLNCLARVSKVYYPSLSFVSKKFRSLIASTELQELRSFLGCTSSGLYVCLRFRTNTDYRQICFTLRQKISSSAKILVPISSLDSPFDYRSGVVAVGSDIYAIGGRNLNNSASSKVMVMDCRSHTWREAPSMRVARDDFPSTCVLNGKIYVIGGCKNLDSTNWIEVFDTKTQTWEFLQIPNEEVCRGFNYKIVGYKEAIHVSSLENNRATFMTYEIHKGRWREPHLSLSHGFHFSNCVIENVFYRYSYEMLQWYDSCRKIWKNLKGFVRRSIMNPRGEGVKMVNYGGNIVLLWEECVTIKKKLIWCEEVVIEKKHQGEIWGLLKWSDVVFITDEKNQLVRALAPDV", "length": 365, "header": "sp|Q9T035-1|FBK97_ARATH Isoform 1 of Putative F-box/kelch-repeat protein At4g39290 OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9T035-1" }, "locus": { "chromosome": "4", "start_pos": 18285205, "end_pos": 18286302, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT4G39290.1", "url": "https://www.ensemblgenomes.org/id/AT4G39290.1" }, { "database": "Ensembl Peptide", "id": "AT4G39290.1", "url": "https://www.ensemblgenomes.org/id/AT4G39290.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "1999", "authors": "Mayer K, Sch\u00fcller C, Wambutt R, Murphy G, Volckaert G, Pohl T, D\u00fcsterh\u00f6ft A, Stiekema W, Entian K D, Terryn N, Harris B, Ansorge W, Brandt P, Grivell L, Rieger M, Weichselgartner M, de Simone V, Obermaier B, Mache R, M\u00fcller M, Kreis M, Delseny M, Puigdomenech P, Watson M, Schmidtheini T, Reichert B, Portatelle D, Perez-Alonso M, Boutry M, Bancroft I, Vos P, Hoheisel J, Zimmermann W, Wedler H, Ridley P, Langham S A, McCullagh B, Bilham L, Robben J, Van der Schueren J, Grymonprez B, Chuang Y J, Vandenbussche F, Braeken M, Weltjens I, Voet M, Bastiaens I, Aert R, Defoor E, Weitzenegger T, Bothe G, Ramsperger U, Hilbert H, Braun M, Holzer E, Brandt A, Peters S, van Staveren M, Dirske W, Mooijman P, Klein Lankhorst R, Rose M, Hauf J, K\u00f6tter P, Berneiser S, Hempel S, Feldpausch M, Lamberth S, Van den Daele H, De Keyser A, Buysshaert C, Gielen J, Villarroel R, De Clercq R, Van Montagu M, Rogers J, Cronin A, Quail M, Bray-Allen S, Clark L, Doggett J, Hall S, Kay M, Lennard N, McLay K, Mayes R, Pettett A, Rajandream M A, Lyne M, Benes V, Rechmann S, Borkova D, Bl\u00f6cker H, Scharfe M, Grimm M, L\u00f6hnert T H, Dose S, de Haan M, Maarse A, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Fartmann B, Granderath K, Dauner D, Herzl A, Neumann S, Argiriou A, Vitale D, Liguori R, Piravandi E, Massenet O, Quigley F, Clabauld G, M\u00fcndlein A, Felber R, Schnabl S, Hiller R, Schmidt W, Lecharny A, Aubourg S, Chefdor F, Cooke R, Berger C, Montfort A, Casacuberta E, Gibbons T, Weber N, Vandenbol M, Bargues M, Terol J, Torres A, Perez-Perez A, Purnelle B, Bent E, Johnson S, Tacon D, Jesse T, Heijnen L, Schwarz S, Scholler P, Heber S, Francs P, Bielke C, Frishman D, Haase D, Lemcke K, Mewes H W, Stocker S, Zaccaria P, Bevan M, Wilson R K, de la Bastide M, Habermann K, Parnell L, Dedhia N, Gnoj L, Schutz K, Huang E, Spiegel L, Sehkon M, Murray J, Sheet P, Cordes M, Abu-Threideh J, Stoneking T, Kalicki J, Graves T, Harmon G, Edwards J, Latreille P, Courtney L, Cloud J, Abbott A, Scott K, Johnson D, Minx P, Bentley D, Fulton B, Miller N, Greco T, Kemp K, Kramer J, Fulton L, Mardis E, Dante M, Pepin K, Hillier L, Nelson J, Spieth J, Ryan E, Andrews S, Geisel C, Layman D, Du H, Ali J, Berghoff A, Jones K, Drone K, Cotton M, Joshu C, Antonoiu B, Zidanic M, Strong C, Sun H, Lamar B, Yordan C, Ma P, Zhong J, Preston R, Vil D, Shekher M, Matero A, Shah R, Swaby I K, O'Shaughnessy A, Rodriguez M, Hoffmann J, Till S, Granat S, Shohdy N, Hasegawa A, Hameed A, Lodhi M, Johnson A, Chen E, Marra M, Martienssen R, McCombie W R", "evidence": [ { "database": "UniProtKB", "id": "Q9T035", "url": "https://www.uniprot.org/uniprotkb/Q9T035" } ], "reference": [ { "type": "PubMed", "id": "10617198", "url": "https://glygen.org/publication/PubMed/10617198" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9T035", "url": "https://www.uniprot.org/uniprotkb/Q9T035" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT4G39290", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT4G39290", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": {}, "pro_annotation": [], "site_annotation": [ { "start_pos": 128, "end_pos": 130, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ 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"name": "envelope glycoprotein", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_568056" }, "gene_names": [ { "name": "T22F8.210", "type": "synonym", "evidence": [ { "id": "NP_568056", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_568056" }, { "id": "Q9T036", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9T036" } ] }, { "name": "T22F8_210", "type": "synonym", "evidence": [ { "id": "NP_568056", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_568056" }, { "id": "Q9T036", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9T036" } ] } ], "protein_names": [ { "name": "Envelope glycoprotein", "type": "synonym", "evidence": [ { "id": "Q9T036", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9T036/entry#names_and_taxonomy" } ] }, { "name": "envelope glycoprotein", "type": "synonym", "evidence": [ { "id": "NP_568056", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_568056" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9T036", "url": "https://www.uniprot.org/uniprotkb/Q9T036" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9T036", "locus": {} } ], "crossref": [ { "id": "830086", "url": "https://www.ncbi.nlm.nih.gov/gene/830086", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR043459", "url": "https://www.ebi.ac.uk/interpro/entry/IPR043459", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT4G39300", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT4G39300", "database": "KEGG Pathway", "categories": [ "Enzyme and 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"database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9T037", "url": "https://www.uniprot.org/uniprotkb/Q9T037", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9T037-1", "url": "https://www.uniprot.org/uniprotkb/Q9T037-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MASFCRSALMAGSRNLVSRSRTVTQKSLNLKPTTTSSPFASMSQSIPRASRVLSALGSVETMIPLHSAVASARLRSSIAADSSCWSLLSQGLATPL", "length": 96, "header": "tr|Q9T036-1|Q9T036_ARATH Isoform 1 of Envelope glycoprotein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9T036-1" }, "isoforms": [ { "isoform_ac": "Q9T036-1", "url": "https://www.uniprot.org/uniprotkb/Q9T036/entry", "sequence": { "sequence": "MASFCRSALMAGSRNLVSRSRTVTQKSLNLKPTTTSSPFASMSQSIPRASRVLSALGSVETMIPLHSAVASARLRSSIAADSSCWSLLSQGLATPL", "length": 96, "header": "tr|Q9T036-1|Q9T036_ARATH Isoform 1 of Envelope glycoprotein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9T036-1" }, "locus": { "chromosome": "4", "start_pos": 18286717, "end_pos": 18288469, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT4G39300.1", "url": "https://www.ensemblgenomes.org/id/AT4G39300.1" }, { "database": "Ensembl Peptide", "id": "AT4G39300.1", "url": "https://www.ensemblgenomes.org/id/AT4G39300.1" } ] } }, { "isoform_ac": "Q9T037-1", "url": "https://www.uniprot.org/uniprotkb/Q9T037/entry", "sequence": { "sequence": "MASFCRSALMAGSRNLVSRSRTVTQKSLNLKPTTTSSPFASMSQSIPRASRVLSALGSVETMIPLHSAVASARLRSSIAADSSCWSLLSQELGVPR", "length": 96, "header": "tr|Q9T037-1|Q9T037_ARATH Computationally mapped isoform of Envelope glycoprotein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9T036-1" }, "locus": { "chromosome": "4", "start_pos": 18286707, "end_pos": 18288465, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT4G39300.2", "url": "https://www.ensemblgenomes.org/id/AT4G39300.2" }, { "database": "Ensembl Peptide", "id": "AT4G39300.2", "url": 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journal : for cell and molecular biology", "date": "2010-07-01", "authors": "Chen Yanmei, Hoehenwarter Wolfgang, Weckwerth Wolfram", "evidence": [ { "database": "iPTMnet", "id": "Q9T038", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9T038" } ], "reference": [ { "type": "PubMed", "id": "20374526", "url": "https://glygen.org/publication/PubMed/20374526" } ] }, { "title": "Large-scale comparative phosphoproteomics identifies conserved phosphorylation sites in plants.", "journal": "Plant physiology", "date": "2010-07", "authors": "Nakagami Hirofumi, Sugiyama Naoyuki, Mochida Keiichi, Daudi Arsalan, Yoshida Yuko, Toyoda Tetsuro, Tomita Masaru, Ishihama Yasushi, Shirasu Ken", "evidence": [ { "database": "iPTMnet", "id": "Q9T038", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9T038" } ], "reference": [ { "type": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" } ] }, { "title": "A large-scale protein phosphorylation 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"https://www.uniprot.org/uniprotkb/Q9T077", "locus": {} } ], "crossref": [ { "id": "828862", "url": "https://www.ncbi.nlm.nih.gov/gene/828862", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "ath:AT4G27530", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT4G27530", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "NVTMSHA", "url": "https://omabrowser.org/oma/group/NVTMSHA/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "AT4G27530", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT4G27530", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9T077", "url": "https://www.uniprot.org/uniprotkb/Q9T077", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9T077-1", "url": "https://www.uniprot.org/uniprotkb/Q9T077-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MAAMFLAKRGAINIHRASSLHIDYNNSSRSVVDGVITITNSRYFASHGNNGEKSEEEAMGTTTDGKAPNVTLGHAADTAKEGLKRATDAAIKKSGDVGKPKSVENDEGDDQEDVAVGDDGTVKGQNQSAG", "length": 130, "header": "tr|Q9T077-1|Q9T077_ARATH Isoform 1 of Uncharacterized protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9T077-1" }, "isoforms": [ { "isoform_ac": "Q9T077-1", "url": "https://www.uniprot.org/uniprotkb/Q9T077/entry", "sequence": { "sequence": "MAAMFLAKRGAINIHRASSLHIDYNNSSRSVVDGVITITNSRYFASHGNNGEKSEEEAMGTTTDGKAPNVTLGHAADTAKEGLKRATDAAIKKSGDVGKPKSVENDEGDDQEDVAVGDDGTVKGQNQSAG", "length": 130, "header": "tr|Q9T077-1|Q9T077_ARATH Isoform 1 of Uncharacterized protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9T077-1" }, "locus": { "chromosome": "4", "start_pos": 13752633, "end_pos": 13753257, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT4G27530.1", "url": "https://www.ensemblgenomes.org/id/AT4G27530.1" }, { "database": "Ensembl Peptide", "id": "AT4G27530.1", "url": 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"url": "https://www.ncbi.nlm.nih.gov/protein/NP_192912" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9T0E2", "url": "https://www.uniprot.org/uniprotkb/Q9T0E2" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9T0E2", "locus": {} } ], "crossref": [ { "id": "Q9T0E2", "url": "https://alphafold.ebi.ac.uk/entry/Q9T0E2", "database": "AlphaFoldDB", "categories": [] }, { "id": "AT4G11750", "url": "https://bar.utoronto.ca/thalemine/portal.do?externalids=AT4G11750", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "cd22152", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd22152", "database": "CDD", "categories": [ 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"AT4G13370.1", "url": "https://www.ensemblgenomes.org/id/AT4G13370.1" }, { "database": "Ensembl Peptide", "id": "AT4G13370.1", "url": "https://www.ensemblgenomes.org/id/AT4G13370.1" } ] } } ], "glycosylation": [], "phosphorylation": [ { "start_pos": 304, "end_pos": 304, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Thr", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9T0K8", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9T0K8" } ], "site_lbl": "Thr304" }, { "start_pos": 334, "end_pos": 334, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9T0K8", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9T0K8" } ], "site_lbl": "Ser334" }, { "start_pos": 553, "end_pos": 553, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Thr", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9T0K8", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9T0K8" } ], "site_lbl": "Thr553" }, { "start_pos": 556, "end_pos": 556, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9T0K8", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9T0K8" } ], "site_lbl": "Ser556" } ], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "1999", "authors": "Mayer K, Sch\u00fcller C, Wambutt R, Murphy G, Volckaert G, Pohl T, D\u00fcsterh\u00f6ft A, Stiekema W, Entian K D, Terryn N, Harris B, Ansorge W, Brandt P, Grivell L, Rieger M, Weichselgartner M, de Simone V, Obermaier B, Mache R, M\u00fcller M, Kreis M, Delseny M, Puigdomenech P, Watson M, Schmidtheini T, Reichert B, Portatelle D, Perez-Alonso M, Boutry M, Bancroft I, Vos P, Hoheisel J, Zimmermann W, Wedler H, Ridley P, Langham S A, McCullagh B, Bilham L, Robben J, Van der Schueren J, Grymonprez B, Chuang Y J, Vandenbussche F, Braeken M, Weltjens I, Voet M, Bastiaens I, Aert R, Defoor E, Weitzenegger T, Bothe G, Ramsperger U, Hilbert H, Braun M, Holzer E, Brandt A, Peters S, van Staveren M, Dirske W, Mooijman P, Klein Lankhorst R, Rose M, Hauf J, K\u00f6tter P, Berneiser S, Hempel S, Feldpausch M, Lamberth S, Van den Daele H, De Keyser A, Buysshaert C, Gielen J, Villarroel R, De Clercq R, Van Montagu M, Rogers J, Cronin A, Quail M, Bray-Allen S, Clark L, Doggett J, Hall S, Kay M, Lennard N, McLay K, Mayes R, Pettett A, Rajandream M A, Lyne M, Benes V, Rechmann S, Borkova D, Bl\u00f6cker H, Scharfe M, Grimm M, L\u00f6hnert T H, Dose S, de Haan M, Maarse A, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Fartmann B, Granderath K, Dauner D, Herzl A, Neumann S, Argiriou A, Vitale D, Liguori R, Piravandi E, Massenet O, Quigley F, Clabauld G, M\u00fcndlein A, Felber R, Schnabl S, Hiller R, Schmidt W, Lecharny A, Aubourg S, Chefdor F, Cooke R, Berger C, Montfort A, Casacuberta E, Gibbons T, Weber N, Vandenbol M, Bargues M, Terol J, Torres A, Perez-Perez A, Purnelle B, Bent E, Johnson S, Tacon D, Jesse T, Heijnen L, Schwarz S, Scholler P, Heber S, Francs P, Bielke C, Frishman D, Haase D, Lemcke K, Mewes H W, Stocker S, Zaccaria P, Bevan M, Wilson R K, de la Bastide M, Habermann K, Parnell L, Dedhia N, Gnoj L, Schutz K, Huang E, Spiegel L, Sehkon M, Murray J, Sheet P, Cordes M, Abu-Threideh J, Stoneking T, Kalicki J, Graves T, Harmon G, Edwards J, Latreille P, Courtney L, Cloud J, Abbott A, Scott K, Johnson D, Minx P, Bentley D, Fulton B, Miller N, Greco T, Kemp K, Kramer J, Fulton L, Mardis E, Dante M, Pepin K, Hillier L, Nelson J, Spieth J, Ryan E, Andrews S, Geisel C, Layman D, Du H, Ali J, Berghoff A, Jones K, Drone K, Cotton M, Joshu C, Antonoiu B, Zidanic M, Strong C, Sun H, Lamar B, Yordan C, Ma P, Zhong J, Preston R, Vil D, Shekher M, Matero A, Shah R, Swaby I K, O'Shaughnessy A, Rodriguez M, Hoffmann J, Till S, Granat S, Shohdy N, Hasegawa A, Hameed A, Lodhi M, Johnson A, Chen E, Marra M, Martienssen R, McCombie W R", "evidence": [ { "database": "UniProtKB", "id": "Q9T0K8", "url": "https://www.uniprot.org/uniprotkb/Q9T0K8" } ], "reference": [ { "type": "PubMed", "id": "10617198", "url": "https://glygen.org/publication/PubMed/10617198" } ] }, { "title": "Functional annotation of a full-length Arabidopsis cDNA collection.", "journal": "Science", "date": "2002", "authors": "Seki Motoaki, Narusaka Mari, Kamiya Asako, Ishida Junko, Satou Masakazu, Sakurai Tetsuya, Nakajima Maiko, Enju Akiko, Akiyama Kenji, Oono Youko, Muramatsu Masami, Hayashizaki Yoshihide, Kawai Jun, Carninci Piero, Itoh Masayoshi, Ishii Yoshiyuki, Arakawa Takahiro, Shibata Kazuhiro, Shinagawa Akira, Shinozaki Kazuo", "evidence": [ { "database": "UniProtKB", "id": "Q9T0K8", "url": "https://www.uniprot.org/uniprotkb/Q9T0K8" } ], "reference": [ { "type": "PubMed", "id": "11910074", "url": 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Cristina, Nakajima Maiko, Narusaka Mari, Seki Motoaki, Sakurai Tetsuya, Satou Masakazu, Tamse Racquel, Vaysberg Maria, Wallender Erika K, Wong Cecilia, Yamamura Yuki, Yuan Shiaulou, Shinozaki Kazuo, Davis Ronald W, Theologis Athanasios, Ecker Joseph R", "evidence": [ { "database": "UniProtKB", "id": "Q9T0K8", "url": "https://www.uniprot.org/uniprotkb/Q9T0K8" } ], "reference": [ { "type": "PubMed", "id": "14593172", "url": "https://glygen.org/publication/PubMed/14593172" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9T0K8", "url": "https://www.uniprot.org/uniprotkb/Q9T0K8" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] }, { "title": "CORTICAL 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"MASLQVSRLVLSSSSSSTRPKAAVSIPKLPKFHVSVPKIPTLSVKEPSFEFVESLPLSLKQKRGSDSIQRTRLNAVLEEVMDRIEMHKNIGDQRNNWNSLLLNSVNMITLTAALMAGIASVNGHGVDSVTAVKIASTVLLTSATGFAALMSKIQPSQLAEEQRNATRLFKKLRVEIEMFLRENEEIEEEDVKEVIKRVLSLDKAYPLPLIGTMLEKFPEEFKPATWWPENKEKNPKTSLANGWSQELEAEMREVAHVVKSRDAEEYEKLGHVALKLNRFLAISGPVLTGVSAVSSVFIGQDSGLAGIVAMTCASLAAVVNTLEHGGQVGMVFEMYRNSAGFFSLLEETMKSTEKRENGQVFETRVAVKLGRSLSELRDLAKRSNLSQVKAKEFASKLF", "length": 398, "header": "tr|Q9XEC5-1|Q9XEC5_ARATH Isoform 1 of F-box protein with a domain protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9XEC5-1" }, "isoforms": [ { "isoform_ac": "Q9XEC5-1", "url": "https://www.uniprot.org/uniprotkb/Q9XEC5/entry", "sequence": { "sequence": "MASLQVSRLVLSSSSSSTRPKAAVSIPKLPKFHVSVPKIPTLSVKEPSFEFVESLPLSLKQKRGSDSIQRTRLNAVLEEVMDRIEMHKNIGDQRNNWNSLLLNSVNMITLTAALMAGIASVNGHGVDSVTAVKIASTVLLTSATGFAALMSKIQPSQLAEEQRNATRLFKKLRVEIEMFLRENEEIEEEDVKEVIKRVLSLDKAYPLPLIGTMLEKFPEEFKPATWWPENKEKNPKTSLANGWSQELEAEMREVAHVVKSRDAEEYEKLGHVALKLNRFLAISGPVLTGVSAVSSVFIGQDSGLAGIVAMTCASLAAVVNTLEHGGQVGMVFEMYRNSAGFFSLLEETMKSTEKRENGQVFETRVAVKLGRSLSELRDLAKRSNLSQVKAKEFASKLF", "length": 398, "header": "tr|Q9XEC5-1|Q9XEC5_ARATH Isoform 1 of F-box protein with a domain protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9XEC5-1" }, "locus": { "chromosome": "4", "start_pos": 2229649, "end_pos": 2230851, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT4G04480.1", "url": "https://www.ensemblgenomes.org/id/AT4G04480.1" }, { "database": "Ensembl Peptide", "id": "AT4G04480.1", "url": "https://www.ensemblgenomes.org/id/AT4G04480.1" } ] } } ], "glycosylation": [], "phosphorylation": [ { "start_pos": 141, "end_pos": 141, 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V, Rechmann S, Borkova D, Bl\u00f6cker H, Scharfe M, Grimm M, L\u00f6hnert T H, Dose S, de Haan M, Maarse A, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Fartmann B, Granderath K, Dauner D, Herzl A, Neumann S, Argiriou A, Vitale D, Liguori R, Piravandi E, Massenet O, Quigley F, Clabauld G, M\u00fcndlein A, Felber R, Schnabl S, Hiller R, Schmidt W, Lecharny A, Aubourg S, Chefdor F, Cooke R, Berger C, Montfort A, Casacuberta E, Gibbons T, Weber N, Vandenbol M, Bargues M, Terol J, Torres A, Perez-Perez A, Purnelle B, Bent E, Johnson S, Tacon D, Jesse T, Heijnen L, Schwarz S, Scholler P, Heber S, Francs P, Bielke C, Frishman D, Haase D, Lemcke K, Mewes H W, Stocker S, Zaccaria P, Bevan M, Wilson R K, de la Bastide M, Habermann K, Parnell L, Dedhia N, Gnoj L, Schutz K, Huang E, Spiegel L, Sehkon M, Murray J, Sheet P, Cordes M, Abu-Threideh J, Stoneking T, Kalicki J, Graves T, Harmon G, Edwards J, Latreille P, Courtney L, Cloud J, Abbott A, Scott K, Johnson D, Minx P, Bentley D, 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"name": "chloroplast", "id": "GO:0009507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009507", "evidence": [ { "database": "UniProtKB", "id": "Q9XEC5", "url": "https://www.uniprot.org/uniprotkb/Q9XEC5" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 164, "end_pos": 166, "annotation": "n_glycosylation_sequon" }, { "start_pos": 384, "end_pos": 386, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [ 141, 151 ], "sequon_annotation_sites": [ { "start_pos": 164, "end_pos": 166 }, { "start_pos": 384, "end_pos": 386 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", 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"url": "https://www.uniprot.org/uniprotkb/Q9XHZ7" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9XHZ7", "locus": {} } ], "crossref": [ { "id": "838783", "url": "https://www.ncbi.nlm.nih.gov/gene/838783", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR006634", "url": "https://www.ebi.ac.uk/interpro/entry/IPR006634", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR050846", "url": "https://www.ebi.ac.uk/interpro/entry/IPR050846", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT1G21790", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT1G21790", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "WPWAFEA", "url": "https://omabrowser.org/oma/group/WPWAFEA/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR13439", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR13439", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR13439:SF4", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR13439:SF4", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF03798", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF03798", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "AT1G21790", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT1G21790", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9XHZ7", "url": "https://www.uniprot.org/uniprotkb/Q9XHZ7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9XHZ7-1", "url": "https://www.uniprot.org/uniprotkb/Q9XHZ7-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MARNGIGSSGGKKNGAGQFFLATLLLWLVSVVFEIAFNLRTELLWVICGGCFFQLMNWVVRSWISRDPIFVNTSVSLLHSIITSASVVFILLNQCLAKGLDEMFDHSELVGGTWKWAYPALCFSCGYFAYDQWDMLQYRLYSGLIPSILVHHLVLLVCFTLALYRNVTINYLILTLICEMHSIFLHVRKLRRMAGIRDSNTALVKLEWVLNWTAFVFARCIPHILITIKLIKDAHKFGKGVELPLALSGMAGMNILNVGLGLDLFHAFRRERSHRRNQENGNLHDHGE", "length": 288, "header": "tr|Q9XHZ7-1|Q9XHZ7_ARATH Isoform 1 of TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9XHZ7-1" }, "isoforms": [ { "isoform_ac": "Q9XHZ7-1", "url": "https://www.uniprot.org/uniprotkb/Q9XHZ7/entry", "sequence": { "sequence": "MARNGIGSSGGKKNGAGQFFLATLLLWLVSVVFEIAFNLRTELLWVICGGCFFQLMNWVVRSWISRDPIFVNTSVSLLHSIITSASVVFILLNQCLAKGLDEMFDHSELVGGTWKWAYPALCFSCGYFAYDQWDMLQYRLYSGLIPSILVHHLVLLVCFTLALYRNVTINYLILTLICEMHSIFLHVRKLRRMAGIRDSNTALVKLEWVLNWTAFVFARCIPHILITIKLIKDAHKFGKGVELPLALSGMAGMNILNVGLGLDLFHAFRRERSHRRNQENGNLHDHGE", "length": 288, "header": "tr|Q9XHZ7-1|Q9XHZ7_ARATH Isoform 1 of TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9XHZ7-1" }, "locus": { "chromosome": "1", "start_pos": 7654088, "end_pos": 7655981, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT1G21790.1", "url": "https://www.ensemblgenomes.org/id/AT1G21790.1" }, { "database": "Ensembl Peptide", "id": "AT1G21790.1", "url": "https://www.ensemblgenomes.org/id/AT1G21790.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Theologis A, Ecker J R, Palm C J, Federspiel N A, Kaul S, White O, Alonso J, Altafi H, Araujo R, Bowman C L, Brooks S Y, Buehler E, Chan A, Chao Q, Chen H, Cheuk R F, Chin C W, Chung M K, Conn L, Conway A B, Conway A R, Creasy T H, Dewar K, Dunn P, Etgu P, Feldblyum T V, Feng J, Fong B, Fujii C Y, Gill J E, Goldsmith A D, Haas B, Hansen N F, Hughes B, Huizar L, Hunter J L, Jenkins J, Johnson-Hopson C, Khan S, Khaykin E, Kim C J, Koo H L, Kremenetskaia I, Kurtz D B, Kwan A, Lam B, Langin-Hooper S, Lee A, Lee J M, Lenz C A, Li J H, Li Y, Lin X, Liu S X, Liu Z A, Luros J S, Maiti R, Marziali A, Militscher J, Miranda M, Nguyen M, Nierman W C, Osborne B I, Pai G, Peterson J, Pham P K, Rizzo M, Rooney T, Rowley D, Sakano H, Salzberg S L, Schwartz J R, Shinn P, Southwick A M, Sun H, Tallon L J, Tambunga G, Toriumi M J, Town C D, Utterback T, Van Aken S, Vaysberg M, Vysotskaia V S, Walker M, Wu D, Yu G, Fraser C M, Venter J C, Davis R W", "evidence": [ { "database": "UniProtKB", "id": "Q9XHZ7", "url": "https://www.uniprot.org/uniprotkb/Q9XHZ7" } ], "reference": [ { "type": "PubMed", "id": "11130712", "url": "https://glygen.org/publication/PubMed/11130712" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9XHZ7", "url": "https://www.uniprot.org/uniprotkb/Q9XHZ7" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT1G21790", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT1G21790", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "Q9XHZ7", "url": "https://www.uniprot.org/uniprotkb/Q9XHZ7" } ], "pmid": "" }, { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "Q9XHZ7", "url": "https://www.uniprot.org/uniprotkb/Q9XHZ7" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 4, "go_terms": [ { "name": "plasma membrane organization", "id": "GO:0007009", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007009", "evidence": [ { "database": "UniProtKB", "id": "Q9XHZ7", "url": "https://www.uniprot.org/uniprotkb/Q9XHZ7" } ], "pmid": "" }, { "name": "phospholipid homeostasis", "id": "GO:0055091", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0055091", "evidence": [ { "database": "UniProtKB", "id": "Q9XHZ7", "url": "https://www.uniprot.org/uniprotkb/Q9XHZ7" } ], "pmid": "" }, { "name": "membrane assembly", "id": "GO:0071709", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0071709", "evidence": [ { "database": "UniProtKB", "id": "Q9XHZ7", "url": "https://www.uniprot.org/uniprotkb/Q9XHZ7" } ], "pmid": "" }, { "name": "regulation of membrane lipid distribution", "id": "GO:0097035", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0097035", "evidence": [ { "database": "UniProtKB", "id": "Q9XHZ7", "url": "https://www.uniprot.org/uniprotkb/Q9XHZ7" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 166, "end_pos": 168, "annotation": "n_glycosylation_sequon" }, { "start_pos": 211, "end_pos": 213, "annotation": "n_glycosylation_sequon" }, { "start_pos": 72, "end_pos": 74, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "Q9XHZ7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9XHZ7" }, { "id": "PS50922", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50922" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "TLC", "eco_id": "ECO_0000259", "start_pos": 65, "end_pos": 282, "start_aa": "Ser", "end_aa": "Asn", "glycosite_overlap": [] } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 166, "end_pos": 168 }, { "start_pos": 211, "end_pos": 213 }, { "start_pos": 72, "end_pos": 74 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "Q9XI02-1", "uniprot_ac": "Q9XI02", "uniprot_id": "Q9XI02_ARATH", "mass": { "chemical_mass": 106726.0, "monoisotopic_mass": 106726.0 }, "refseq": {}, "gene_names": [ { "name": "F8K7.18", "type": "synonym", "evidence": [ { "id": "Q9XI02", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9XI02" } ] }, { "name": "F8K7_18", "type": "synonym", "evidence": [ { "id": "Q9XI02", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9XI02" } ] } ], "protein_names": [ { "name": "DUF630 family protein, putative (DUF630 and DUF632)", "type": "synonym", "evidence": [ { "id": "Q9XI02", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9XI02/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9XI02", "url": "https://www.uniprot.org/uniprotkb/Q9XI02" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9XI02", "locus": {} } ], "crossref": [ { "id": "AT1G21740", "url": "https://bar.utoronto.ca/thalemine/portal.do?externalids=AT1G21740", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "838778", "url": "https://www.ncbi.nlm.nih.gov/gene/838778", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR006867", "url": "https://www.ebi.ac.uk/interpro/entry/IPR006867", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR006868", "url": "https://www.ebi.ac.uk/interpro/entry/IPR006868", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT1G21740", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT1G21740", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "KSMLKCH", "url": "https://omabrowser.org/oma/group/KSMLKCH/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR21450", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR21450", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR21450:SF2", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR21450:SF2", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF04782", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF04782", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF04783", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF04783", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "AT1G21740", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT1G21740", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9XI02", "url": "https://www.uniprot.org/uniprotkb/Q9XI02", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9XI02-1", "url": "https://www.uniprot.org/uniprotkb/Q9XI02-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MGCGGSKVDDQPLVILCRERKQLIKAASHHRCALAAAHLSYFQSLCDVGDSIKRFVDEELVLVGTSSSSSPDSPVLTLPSDEGKPHKHKISSSSTSVSHSVIEDDDEGEGEDQHLHLSSGSELDSGSESGSDDSLGHIHIETSPKVKEKETRLPENYQPGYQSGYQSGYQPGFTPGYQYQPGYSAGYQYPVEGWGFMGENPNLNPYPNPNQNPGMYFMKKSVQPSRPVVFQPENHRVENGQWLPENGVGYSNYYPGNANTGYFGYPEQRREPPSPVRPTPAPPSPPRISSWDFLNVFDTYDYNRAGGGESSGAGAGFFPAMGGGKSNSSSPDSREVREREGIPELEEETEQEVIFGQTFKHMKRKGIEKVKEQHRQENEIHERKIKKRGDSGEGTSRAVPVVERATESSFGSKTVSSFSSSEEESEFHHVNDGEGKSSSNDLGGHETVATKSVGEVEEEYVRKKGVSFELDENVTTSFDVESSKISSLSALSVHATRDLREVVKEIKSEFEVASSHGKEVAVLLEVSKLPYQQKSSGLKVIFSRIMYLVAPSTVSSRSQPQPSIRLTSRILKIAKSYNGQDVREGLTGNLSATLEQLYAWEKKLYKEVKDEEKLRVVYEEKCRTLKKLDSLGAESSKIDTTRAAIRKLLTKLDVCIRSVDSISSRIHKLRDEELQPQLTQLIHGLIRMWRSMLKCHQKQFQAIMESKVRSLRANTGLQRDSGLKAILDLEMELREWCISFNDWVNTQKSYVESLNGWLSRCLHYEPESTEDGIAPFSPSRVGAPQVFVICKDWQEAMARISGENVSNAMQGFASSLHELWERQDEEQRQRVKAEYVSHDFEKRLNDLRMERARVRMRNDQLQDGASEKSVVLSESGISALDDLKVDLDSMRKKLEEERARHKETIKLVNNAASSSLQAGLVPIFEALGNFTSQVVKAHEDVRFQQQQQPESED", "length": 953, "header": "tr|Q9XI02-1|Q9XI02_ARATH Isoform 1 of DUF630 family protein, putative (DUF630 and DUF632) OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9XI02-1" }, "isoforms": [ { "isoform_ac": "Q9XI02-1", "url": "https://www.uniprot.org/uniprotkb/Q9XI02/entry", "sequence": { "sequence": 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"tr|Q9XI02-1|Q9XI02_ARATH Isoform 1 of DUF630 family protein, putative (DUF630 and DUF632) OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9XI02-1" }, "locus": { "chromosome": "1", "start_pos": 7640906, "end_pos": 7645240, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT1G21740.1", "url": "https://www.ensemblgenomes.org/id/AT1G21740.1" }, { "database": "Ensembl Peptide", "id": "AT1G21740.1", "url": "https://www.ensemblgenomes.org/id/AT1G21740.1" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "other", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 279, "start_aa": "Thr", "end_pos": 279, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr279", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": 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Nierman W C, Osborne B I, Pai G, Peterson J, Pham P K, Rizzo M, Rooney T, Rowley D, Sakano H, Salzberg S L, Schwartz J R, Shinn P, Southwick A M, Sun H, Tallon L J, Tambunga G, Toriumi M J, Town C D, Utterback T, Van Aken S, Vaysberg M, Vysotskaia V S, Walker M, Wu D, Yu G, Fraser C M, Venter J C, Davis R W", "evidence": [ { "database": "UniProtKB", "id": "Q9XI02", "url": "https://www.uniprot.org/uniprotkb/Q9XI02" } ], "reference": [ { "type": "PubMed", "id": "11130712", "url": "https://glygen.org/publication/PubMed/11130712" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9XI02", "url": "https://www.uniprot.org/uniprotkb/Q9XI02" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": 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"sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "Q9XI04-1", "uniprot_ac": "Q9XI04", "uniprot_id": "Q9XI04_ARATH", "mass": { "chemical_mass": 27542.0, "monoisotopic_mass": 27542.0 }, "refseq": { "ac": "NP_001154356", "name": "uncharacterized protein", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001154356" }, "gene_names": [], "protein_names": [ { "name": "Transmembrane protein", "type": "synonym", "evidence": [ { "id": "Q9XI04", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9XI04/entry#names_and_taxonomy" } ] }, { "name": "uncharacterized protein", "type": "synonym", "evidence": [ { "id": "NP_001154356", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001154356" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, 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"MGNVMDSFFTGFSHSIGNFFGSPLDFLSGKSCSSVCPSPWDFICYVENFCVANLAKTALILILSYFFLFFIYMLYKVGFWHCIIHGFFKLLWVLVSCWFYMLGYCCSFFCYDLLHSKRRRRRRHNRYIEEDYDDNSDDDDDVDDDGSFTYHRSKRECRKEERLRKSLRPRNHRVRVGVRKDHRSDSGLSQHADGGSPIHGVRVSRESKFARKVSKRRNRVHHGDRMNHVSLLN", "length": 233, "header": "tr|Q9XI04-1|Q9XI04_ARATH Isoform 1 of Transmembrane protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9XI04-1" }, "isoforms": [ { "isoform_ac": "Q9XI04-1", "url": "https://www.uniprot.org/uniprotkb/Q9XI04/entry", "sequence": { "sequence": "MGNVMDSFFTGFSHSIGNFFGSPLDFLSGKSCSSVCPSPWDFICYVENFCVANLAKTALILILSYFFLFFIYMLYKVGFWHCIIHGFFKLLWVLVSCWFYMLGYCCSFFCYDLLHSKRRRRRRHNRYIEEDYDDNSDDDDDVDDDGSFTYHRSKRECRKEERLRKSLRPRNHRVRVGVRKDHRSDSGLSQHADGGSPIHGVRVSRESKFARKVSKRRNRVHHGDRMNHVSLLN", "length": 233, "header": "tr|Q9XI04-1|Q9XI04_ARATH Isoform 1 of Transmembrane protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9XI04-1" }, "locus": { "chromosome": "1", "start_pos": 7628456, "end_pos": 7629364, "strand": "+", 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P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9XI08", "url": "https://www.uniprot.org/uniprotkb/Q9XI08" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT1G21695", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT1G21695", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q9XI08", "url": "https://www.uniprot.org/uniprotkb/Q9XI08" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 96, "end_pos": 98, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], 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"categories": [ "Protein Classification" ] }, { "id": "PF07676", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF07676", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "AT1G21680", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT1G21680", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9XI10", "url": "https://www.uniprot.org/uniprotkb/Q9XI10", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9XI10-1", "url": "https://www.uniprot.org/uniprotkb/Q9XI10-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MNISQIIFFASLLLRLHLSTAEHQNSNAGDGDTIIFTTLGRSHYEFDIFALSTTQPPSVSGELRITDGESVNFNGYFPSPSPALLSLLPDETLIQMEDSSPLHLIYVTERNGTSSLYYDLVYGGNSDFKTKRRSVLEAPSRVQVPLLSRFDHLSGMTVNSFKDKPSLSGEFIVYVSTHESSGEPRASWTAVYSTELKTGLTRRLTPSGVADFSPAVSPSGNLTAVASYGERGWTGEVEELRTDIYVFLTRDGSHRVKVVEHGGWPCWVDESTLYFHRRSEEDGWISVYRAILPENGPLTTESVTIQRVTPPGVHAFTPATSPNNHEFVAVATRRPGSDYRHVELFDLKRNEFIELTRLVAPKSHHLNPFLSPDSSRVGYHSCRGDANGRRSPLLFLENIQTTTRDLSLFRIDGSFPSFSPGGDRIAYVKMPGVFVVKPDGSGQREVYKGMAFSTAWDPVRPGIVYSSSGPTFATERTEVDVISIDVDAADKSSSVRRLTTNGKNNAFPWPSPDGKRIVFRSGRTGHKNLYIMDAEKGESGGLWRLTEGAWTDTMCNWSPDGEWIAFASDRESPGSGSFELFLIHPNGTGLRKLIQSGTGGRTNHPIFSPDSKSLVFTSDYAGISAEPISNPHHYQPYGDIFTVKLDGSNVRRLTHNSYEDGTPAWAPRFIHPNNVELQRRNDSRCSFEDCHWLNKYPTLKGRKISC", "length": 706, "header": "tr|Q9XI10-1|Q9XI10_ARATH Isoform 1 of DPP6 N-terminal domain-like protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9XI10-1" }, "isoforms": [ { "isoform_ac": "Q9XI10-1", "url": "https://www.uniprot.org/uniprotkb/Q9XI10/entry", "sequence": { 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"database": "Ensembl Transcript", "id": "AT1G21680.1", "url": "https://www.ensemblgenomes.org/id/AT1G21680.1" }, { "database": "Ensembl Peptide", "id": "AT1G21680.1", "url": "https://www.ensemblgenomes.org/id/AT1G21680.1" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "other", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 309, "start_aa": "Thr", "end_pos": 309, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr309", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ], "filter_code": "000000000000000010000.00000000001000.0.01000" } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "Sequence and analysis of 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"https://bar.utoronto.ca/thalemine/portal.do?externalids=AT1G15490", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "838119", "url": "https://www.ncbi.nlm.nih.gov/gene/838119", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR000073", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000073", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR029058", "url": "https://www.ebi.ac.uk/interpro/entry/IPR029058", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT1G15490", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT1G15490", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "YCIRRSY", "url": "https://omabrowser.org/oma/group/YCIRRSY/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR34953", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR34953", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR34953:SF1", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR34953:SF1", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR43689", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR43689", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR43689:SF8", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR43689:SF8", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF12697", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF12697", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "AT1G15490", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT1G15490", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "A0A1P8ANY5", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ANY5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A1P8ANY5-1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ANY5-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A1P8ANZ0", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ANZ0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A1P8ANZ0-1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ANZ0-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A1P8AP00", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AP00", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A1P8AP00-1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AP00-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9XI20", "url": "https://www.uniprot.org/uniprotkb/Q9XI20", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9XI20-1", "url": "https://www.uniprot.org/uniprotkb/Q9XI20-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MAKSWFLVEKARRCLRTVFFMVAMLASLLVSSLPLLVAIGDVLVPSFLLSSFTCVTCYGAKEHLRRYGFKRSLTDIPIVSVVRSFLVICIYLLSDVPALSHGPYLGTVSLCSVVSVLLLSVKACLFTVNSQLNNEASFSPSRKRLHLKKSWGMPVLFLSSVVFALGHTVVAYRTSCRARRKILYHRVDPEAVLSCKSIFSGHQKVPRSPTPVVGKASKFDGEARRKPLSHDEGELPVRLLADVDSLFVTIRGLTVHYKLCSPGSPRQSISSNVLEANSSYNTPEIMAGRSKFDRKVLSMVTKSQHHHHHRSYNSLFNNSSLHDPLLDGSPTSPLLFKEIKEGTGLVDDMNVFNFGAEEQDLGESGQFGVVLVHGFGGGVFSWRHVMGSLAQQLGCVVTAFDRPGWGLTARPHKNDLEERQLLNPYSLENQVEMLIAFCYEMGFSSVVFVGHDDGGLLALKAAQRLMATNDPIKVVVKGVVLLNTSLSREVVPAFARILLHTSLGKKHLVRPLLRTEIAQVVNRRAWYDPAKMTTDVLRLYKAPLHVEGWDEALHEIGRLSSEMVLAPQNAASLLKAVENLPVLVIAGAEDALVPLKSSQGMASKLLNSRLVAISGCGHLPHEECPKALLAAMSPFITRLVIRPDLQSQ", "length": 648, "header": "tr|Q9XI20-1|Q9XI20_ARATH Isoform 1 of Alpha/beta-Hydrolases superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9XI20-1" }, "isoforms": [ { "isoform_ac": "A0A1P8ANY5-1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ANY5/entry", "sequence": { "sequence": "MIKSALLMIISCTFCGIGIYLLSDVPALSHGPYLGTVSLCSVVSVLLLSVKACLFTVNSQLNNEASFSPSRKRLHLKKSWGMPVLFLSSVVFALGHTVVAYRTSCRARRKILYHRVDPEAVLSCKSIFSGHQKVPRSPTPVVGKASKFDGEARRKPLSHDEGELPVRLLADVDSLFVTIRGLTVHYKLCSPGSPRQSISSNVLEANSSYNTPEIMAGRSKFDRKVLSMVTKSQHHHHHRSYNSLFNNSSLHDPLLDGSPTSPLLFKEIKEGTGLVDDMNVFNFGAEEQDLGESGQFGVVLVHGFGGGVFSWRHVMGSLAQQLGCVVTAFDRPGWGLTARPHKNDLEERQLLNPYSLENQVEMLIAFCYEMGFSSVVFVGHDDGGLLALKAAQRLMATNDPIKVVVKGVVLLNTSLSREVVPAFARILLHTSLGKKHLVRPLLRTEIAQVVNRRAWYDPAKMTTDVLRLYKAPLHVEGWDEALHEIGRLSSEMVLAPQNAASLLKAVENLPVLVIAGAEDALVPLKSSQGMASKLLNSRLVAISGCGHLPHEECPKALLAAMSPFITRLVIRPDLQSQ", "length": 577, "header": "tr|A0A1P8ANY5-1|A0A1P8ANY5_ARATH Computationally mapped isoform of Alpha/beta-Hydrolases superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9XI20-1" }, "locus": { "chromosome": "1", "start_pos": 5320615, "end_pos": 5323895, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT1G15490.2", "url": "https://www.ensemblgenomes.org/id/AT1G15490.2" }, { "database": "Ensembl Peptide", "id": "AT1G15490.2", "url": "https://www.ensemblgenomes.org/id/AT1G15490.2" } ] } }, { "isoform_ac": "A0A1P8ANZ0-1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8ANZ0/entry", "sequence": { "sequence": "MAKSWFLVEKARRCLRTVFFMVAMLASLLVSSLPLLVAIGDVLVPSFLLSSFTCVTCYGAKEHLRRYGFKRSLTDIPIVSVVRSFLVICIYLLSDVPALSHGPYLGTVSLCSVVSVLLLSVKACLFTVNSQLNNEASFSPSRKRLHLKKSWGMPVLFLSSVVFALGHTVVAYRTSCRARRKILYHRVDPEAVLSCKSIFSGHQKVPRSPTPVVGKASKFDGEARRKPLSHDEGELPVRLLADVDSLFVTIRGLTVHYKLCSPGSPRQSISSNVLEANSSYNTPEIMAGRSKFDRKVLSMVTKSQHHHHHRSYNSLFNNSSLHDPLLDGSPTSPLLFKEIKEGTGLVDDMNVFNFGAEEQDLGESGQFGVVLVHGFGGGVFSWRHVMGSLAQQLGCVVTAFDRPGWGLTARPHKNDLEERQLLNPYSLENQVEMLIAFCYEMGFSSVVFVGHDDGGLLALKAAQRLMATNDPIKVVVKGVVLLNTSLSREVVPAFARILLHTSLGKKHLVRPLLRTEIAQVVNRRAWYDPAKMTTDVLRLYKVPYIKQRFAIW", "length": 552, "header": "tr|A0A1P8ANZ0-1|A0A1P8ANZ0_ARATH Computationally mapped isoform of Alpha/beta-Hydrolases superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9XI20-1" }, "locus": { "chromosome": "1", "start_pos": 5320615, "end_pos": 5323895, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT1G15490.3", "url": "https://www.ensemblgenomes.org/id/AT1G15490.3" }, { "database": "Ensembl Peptide", "id": "AT1G15490.3", "url": "https://www.ensemblgenomes.org/id/AT1G15490.3" } ] } }, { "isoform_ac": "A0A1P8AP00-1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AP00/entry", "sequence": { "sequence": "MPVLFLSSVVFALGHTVVAYRTSCRARRKILYHRVDPEAVLSCKSIFSGHQKVPRSPTPVVGKASKFDGEARRKPLSHDEGELPVRLLADVDSLFVTIRGLTVHYKLCSPGSPRQSISSNVLEANSSYNTPEIMAGRSKFDRKVLSMVTKSQHHHHHRSYNSLFNNSSLHDPLLDGSPTSPLLFKEIKEGTGLVDDMNVFNFGAEEQDLGESGQFGVVLVHGFGGGVFSWRHVMGSLAQQLGCVVTAFDRPGWGLTARPHKNDLEERQLLNPYSLENQVEMLIAFCYEMGFSSVVFVGHDDGGLLALKAAQRLMATNDPIKVVVKGVVLLNTSLSREVVPAFARILLHTSLGKKHLVRPLLRTEIAQVVNRRAWYDPAKMTTDVLRLYKAPLHVEGWDEALHEIGRLSSEMVLAPQNAASLLKAVENLPVLVIAGAEDALVPLKSSQGMASKLLNSRLVAISGCGHLPHEECPKALLAAMSPFITRLVIRPDLQSQ", "length": 496, "header": "tr|A0A1P8AP00-1|A0A1P8AP00_ARATH Computationally mapped isoform of Alpha/beta-Hydrolases superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9XI20-1" }, "locus": { "chromosome": "1", "start_pos": 5320615, "end_pos": 5323895, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT1G15490.4", "url": "https://www.ensemblgenomes.org/id/AT1G15490.4" }, { "database": "Ensembl Peptide", "id": "AT1G15490.4", "url": "https://www.ensemblgenomes.org/id/AT1G15490.4" } ] } }, { "isoform_ac": "Q9XI20-1", "url": "https://www.uniprot.org/uniprotkb/Q9XI20/entry", "sequence": { "sequence": "MAKSWFLVEKARRCLRTVFFMVAMLASLLVSSLPLLVAIGDVLVPSFLLSSFTCVTCYGAKEHLRRYGFKRSLTDIPIVSVVRSFLVICIYLLSDVPALSHGPYLGTVSLCSVVSVLLLSVKACLFTVNSQLNNEASFSPSRKRLHLKKSWGMPVLFLSSVVFALGHTVVAYRTSCRARRKILYHRVDPEAVLSCKSIFSGHQKVPRSPTPVVGKASKFDGEARRKPLSHDEGELPVRLLADVDSLFVTIRGLTVHYKLCSPGSPRQSISSNVLEANSSYNTPEIMAGRSKFDRKVLSMVTKSQHHHHHRSYNSLFNNSSLHDPLLDGSPTSPLLFKEIKEGTGLVDDMNVFNFGAEEQDLGESGQFGVVLVHGFGGGVFSWRHVMGSLAQQLGCVVTAFDRPGWGLTARPHKNDLEERQLLNPYSLENQVEMLIAFCYEMGFSSVVFVGHDDGGLLALKAAQRLMATNDPIKVVVKGVVLLNTSLSREVVPAFARILLHTSLGKKHLVRPLLRTEIAQVVNRRAWYDPAKMTTDVLRLYKAPLHVEGWDEALHEIGRLSSEMVLAPQNAASLLKAVENLPVLVIAGAEDALVPLKSSQGMASKLLNSRLVAISGCGHLPHEECPKALLAAMSPFITRLVIRPDLQSQ", "length": 648, "header": "tr|Q9XI20-1|Q9XI20_ARATH Isoform 1 of Alpha/beta-Hydrolases superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9XI20-1" }, "locus": { "chromosome": "1", "start_pos": 5320615, "end_pos": 5323895, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT1G15490.1", "url": "https://www.ensemblgenomes.org/id/AT1G15490.1" }, { "database": "Ensembl Peptide", "id": "AT1G15490.1", "url": "https://www.ensemblgenomes.org/id/AT1G15490.1" } ] } } ], "glycosylation": [], "phosphorylation": [ { "start_pos": 4, "end_pos": 4, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9XI20", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9XI20" } ], "site_lbl": "Ser4" } ], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Theologis A, Ecker J R, Palm C J, Federspiel N A, Kaul S, White O, Alonso J, Altafi H, Araujo R, Bowman C L, Brooks S Y, Buehler E, Chan A, Chao Q, Chen H, Cheuk R F, Chin C W, Chung M K, Conn L, Conway A B, Conway A R, Creasy T H, Dewar K, Dunn P, Etgu P, Feldblyum T V, Feng J, Fong B, Fujii C Y, Gill J E, Goldsmith A D, Haas B, Hansen N F, Hughes B, Huizar L, Hunter J L, Jenkins J, Johnson-Hopson C, Khan S, Khaykin E, Kim C J, Koo H L, Kremenetskaia I, Kurtz D B, Kwan A, Lam B, Langin-Hooper S, Lee A, Lee J M, Lenz C A, Li J H, Li Y, Lin X, Liu S X, Liu Z A, Luros J S, Maiti R, Marziali A, Militscher J, Miranda M, Nguyen M, Nierman W C, Osborne B I, Pai G, Peterson J, Pham P K, Rizzo M, Rooney T, Rowley D, Sakano H, Salzberg S L, Schwartz J R, Shinn P, Southwick A M, Sun H, Tallon L J, Tambunga G, Toriumi M J, Town C D, Utterback T, Van Aken S, Vaysberg M, Vysotskaia V S, Walker M, Wu D, Yu G, Fraser C M, Venter J C, Davis R W", "evidence": [ { "database": "UniProtKB", "id": "Q9XI20", "url": "https://www.uniprot.org/uniprotkb/Q9XI20" } ], "reference": [ { "type": "PubMed", "id": "11130712", "url": "https://glygen.org/publication/PubMed/11130712" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9XI20", "url": "https://www.uniprot.org/uniprotkb/Q9XI20" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT1G15490", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT1G15490", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "Q9XI20", "url": "https://www.uniprot.org/uniprotkb/Q9XI20" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "hydrolase activity", "id": "GO:0016787", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016787", "evidence": [ { "database": "UniProtKB", "id": "Q9XI20", "url": "https://www.uniprot.org/uniprotkb/Q9XI20" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 277, "end_pos": 279, "annotation": "n_glycosylation_sequon" }, { "start_pos": 317, "end_pos": 319, "annotation": "n_glycosylation_sequon" }, { "start_pos": 318, "end_pos": 320, "annotation": "n_glycosylation_sequon" }, { "start_pos": 483, "end_pos": 485, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "Q9XI20", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9XI20" }, { "id": "PF12697", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF12697" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "AB hydrolase-1", "eco_id": "ECO_0000259", 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CANONICAL=Q9XI45-1" }, "locus": { "chromosome": "1", "start_pos": 5242073, "end_pos": 5243262, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT1G15230.1", "url": "https://www.ensemblgenomes.org/id/AT1G15230.1" }, { "database": "Ensembl Peptide", "id": "AT1G15230.1", "url": "https://www.ensemblgenomes.org/id/AT1G15230.1" } ] } } ], "glycosylation": [], "phosphorylation": [ { "start_pos": 131, "end_pos": 131, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9XI45", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9XI45" }, { "database": "PubMed", "id": "22440515", "url": "https://glygen.org/publication/PubMed/22440515" } ], "site_lbl": "Ser131" }, { "start_pos": 132, "end_pos": 132, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9XI45", "url": 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Proteomics", "date": "2009", "authors": "Jones Alexandra M E, MacLean Daniel, Studholme David J, Serna-Sanz Antonio, Andreasson Erik, Rathjen John P, Peck Scott C", "evidence": [ { "database": "UniProtKB", "id": "Q9XI45", "url": "https://www.uniprot.org/uniprotkb/Q9XI45" } ], "reference": [ { "type": "PubMed", "id": "19245862", "url": "https://glygen.org/publication/PubMed/19245862" } ] }, { "title": "Large-scale Arabidopsis phosphoproteome profiling reveals novel chloroplast kinase substrates and phosphorylation networks.", "journal": "Plant physiology", "date": "2009-06", "authors": "Reiland Sonja, Messerli Ga\u00eblle, Baerenfaller Katja, Gerrits Bertran, Endler Anne, Grossmann Jonas, Gruissem Wilhelm, Baginsky Sacha", "evidence": [ { "database": "iPTMnet", "id": "Q9XI45", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9XI45" } ], "reference": [ { "type": "PubMed", "id": "19376835", "url": "https://glygen.org/publication/PubMed/19376835" } ] }, { "title": 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"header": "tr|Q9XI57-1|Q9XI57_ARATH Isoform 1 of S-adenosyl-L-methionine-dependent methyltransferases superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9XI57-1" }, "isoforms": [ { "isoform_ac": "A0A1P8APB9-1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8APB9/entry", "sequence": { "sequence": "MNGGDGASSYARNSSYQRGAIEAAEALLRNEINARLDITNHSFSSFTIADFGCSSGPNTVIAVDIIIQALYHKFTSSLPNTTTPQFQVFFNDVSHTDFNALFALLPPQRPYFVAGVPGSFYGNLFPKAHLNLAYSSCALCWLSDLPSELTDTSSPAYNRGRIHYTGASAEVAQAYSSQYKKDIKLFLHARSQELAENGLMALIVPGVPDGFLDCQEASTGSEFDLLGSCLMDMAKEVLALFSVRNKNP", "length": 248, "header": "tr|A0A1P8APB9-1|A0A1P8APB9_ARATH Computationally mapped isoform of S-adenosyl-L-methionine-dependent methyltransferases superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9XI57-1" }, "locus": { "chromosome": "1", "start_pos": 5204433, "end_pos": 5205960, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT1G15125.2", "url": 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Town C D, Utterback T, Van Aken S, Vaysberg M, Vysotskaia V S, Walker M, Wu D, Yu G, Fraser C M, Venter J C, Davis R W", "evidence": [ { "database": "UniProtKB", "id": "Q9XI57", "url": "https://www.uniprot.org/uniprotkb/Q9XI57" } ], "reference": [ { "type": "PubMed", "id": "11130712", "url": "https://glygen.org/publication/PubMed/11130712" } ] }, { "title": "Large-scale comparative phosphoproteomics identifies conserved phosphorylation sites in plants.", "journal": "Plant physiology", "date": "2010-07", "authors": "Nakagami Hirofumi, Sugiyama Naoyuki, Mochida Keiichi, Daudi Arsalan, Yoshida Yuko, Toyoda Tetsuro, Tomita Masaru, Ishihama Yasushi, Shirasu Ken", "evidence": [ { "database": "iPTMnet", "id": "Q9XI57", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9XI57" } ], "reference": [ { "type": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference 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"database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9XI71-1", "url": "https://www.uniprot.org/uniprotkb/Q9XI71-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MASTLRNIHGKRSNLQSEFTGNGGSKRRNLHDETDQNVIASEDTVYRYLCPVKKTGSIIGKGGEIAKQIRSETKSNMRINEALPGCEERVVTMYSTNEELNHFGDDGELVCPALDALFKVHDMVVADADQDDGTDDDNDLGEKQTVTVRMLVPSDQIGCVIGKGGQVIQNLRNDTNAQIRVIKDHLPACALTLSHDELLLIIGEPLVVREALYQVASLLHDNPSRFQHLLLSSSSSSMHQPGAMLMSAALTSSHRNYAVRRDIADAREFCVCFICPAENVGGVIGKGGGFINQIRQETGATIRVNTSETDDDDCIIFISSKEFYEDQSPAVNAAIRLQQRCSEKVGKDANDLAISTRLLVSSSQIGCLIGKGGAVISEMRSVTRANIRILQKEDVPKIAREDEEMVQITGSPDAAMKALTQVILRLRANSFDMDHGLVLLPTSFPYIPQVTESSSKSKYAKRDDHSKLNSNSKRRNHVS", "length": 479, "header": "tr|Q9XI71-1|Q9XI71_ARATH Isoform 1 of RNA-binding KH domain-containing protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9XI71-1" }, "isoforms": [ { "isoform_ac": "Q9XI71-1", "url": "https://www.uniprot.org/uniprotkb/Q9XI71/entry", "sequence": { "sequence": "MASTLRNIHGKRSNLQSEFTGNGGSKRRNLHDETDQNVIASEDTVYRYLCPVKKTGSIIGKGGEIAKQIRSETKSNMRINEALPGCEERVVTMYSTNEELNHFGDDGELVCPALDALFKVHDMVVADADQDDGTDDDNDLGEKQTVTVRMLVPSDQIGCVIGKGGQVIQNLRNDTNAQIRVIKDHLPACALTLSHDELLLIIGEPLVVREALYQVASLLHDNPSRFQHLLLSSSSSSMHQPGAMLMSAALTSSHRNYAVRRDIADAREFCVCFICPAENVGGVIGKGGGFINQIRQETGATIRVNTSETDDDDCIIFISSKEFYEDQSPAVNAAIRLQQRCSEKVGKDANDLAISTRLLVSSSQIGCLIGKGGAVISEMRSVTRANIRILQKEDVPKIAREDEEMVQITGSPDAAMKALTQVILRLRANSFDMDHGLVLLPTSFPYIPQVTESSSKSKYAKRDDHSKLNSNSKRRNHVS", "length": 479, "header": "tr|Q9XI71-1|Q9XI71_ARATH Isoform 1 of RNA-binding KH domain-containing protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9XI71-1" }, "locus": { "chromosome": "1", "start_pos": 4843184, "end_pos": 4845913, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT1G14170.3", "url": "https://www.ensemblgenomes.org/id/AT1G14170.3" }, { "database": "Ensembl Peptide", "id": "AT1G14170.3", "url": "https://www.ensemblgenomes.org/id/AT1G14170.3" } ] } } ], 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Southwick A M, Sun H, Tallon L J, Tambunga G, Toriumi M J, Town C D, Utterback T, Van Aken S, Vaysberg M, Vysotskaia V S, Walker M, Wu D, Yu G, Fraser C M, Venter J C, Davis R W", "evidence": [ { "database": "UniProtKB", "id": "Q9XI71", "url": "https://www.uniprot.org/uniprotkb/Q9XI71" } ], "reference": [ { "type": "PubMed", "id": "11130712", "url": "https://glygen.org/publication/PubMed/11130712" } ] }, { "title": "Large-scale Arabidopsis phosphoproteome profiling reveals novel chloroplast kinase substrates and phosphorylation networks.", "journal": "Plant Physiol.", "date": "2009", "authors": "Reiland Sonja, Messerli Ga\u00eblle, Baerenfaller Katja, Gerrits Bertran, Endler Anne, Grossmann Jonas, Gruissem Wilhelm, Baginsky Sacha", "evidence": [ { "database": "UniProtKB", "id": "Q9XI71", "url": "https://www.uniprot.org/uniprotkb/Q9XI71" } ], "reference": [ { "type": "PubMed", "id": "19376835", "url": "https://glygen.org/publication/PubMed/19376835" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9XI71", "url": "https://www.uniprot.org/uniprotkb/Q9XI71" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "mRNA binding", "id": "GO:0003729", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003729", "evidence": [ { "database": "UniProtKB", "id": "Q9XI71", "url": "https://www.uniprot.org/uniprotkb/Q9XI71" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q9XI71", "url": "https://www.uniprot.org/uniprotkb/Q9XI71" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "Q9XI71", "url": "https://www.uniprot.org/uniprotkb/Q9XI71" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 2, "go_terms": [ { "name": "RNA processing", "id": "GO:0006396", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006396", "evidence": [ { "database": "UniProtKB", "id": "Q9XI71", "url": "https://www.uniprot.org/uniprotkb/Q9XI71" } ], "pmid": "" }, { "name": "positive regulation of flower development", "id": "GO:0009911", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009911", "evidence": [ { "database": "UniProtKB", "id": "Q9XI71", "url": "https://www.uniprot.org/uniprotkb/Q9XI71" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 173, "end_pos": 175, "annotation": "n_glycosylation_sequon" }, { "start_pos": 305, "end_pos": 307, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "Q9XI71", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9XI71" }, { "id": "SM00322", "database": "SMART", "url": "http://smart.embl.de/smart/do_annotation.pl?DOMAIN=SM00322" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "K Homology", "eco_id": "ECO_0000259", "start_pos": 42, "end_pos": 119, "start_aa": "Glu", "end_aa": "Lys", "glycosite_overlap": [] } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 173, "end_pos": 175 }, { "start_pos": 305, "end_pos": 307 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": 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"total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 3 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "Q9XI76-1", "uniprot_ac": "Q9XI76", "uniprot_id": "Q9XI76_ARATH", "mass": { "chemical_mass": 35119.0, "monoisotopic_mass": 35119.0 }, "refseq": { "ac": "NP_001322167", "name": "2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001322167" }, "gene_names": [ { "name": "ATDAO2", "type": "recommended", "evidence": [ { "id": "Q9XI76", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9XI76" } ] }, { "name": "F7A19.20", "type": "synonym", "evidence": [ { "id": "NP_001322167", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001322167" }, { "id": "Q9XI76", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9XI76" } ] }, { "name": "F7A19_20", "type": "synonym", "evidence": [ { "id": "NP_001322167", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001322167" }, { "id": "Q9XI76", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9XI76" } ] } ], "protein_names": [ { "name": "2-oxoglutarate-dependent dioxygenase DAO", "type": "recommended", "evidence": [ { "id": "Q9XI76", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9XI76/entry#names_and_taxonomy" } ] }, { "name": "2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein", "type": "synonym", "evidence": [ { "id": "NP_001322167", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001322167" } ] }, { "name": "Protein DIOXYGENASE FOR AUXIN OXIDATION", "type": "synonym", "evidence": [ { "id": "Q9XI76", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9XI76/entry#names_and_taxonomy" } ] } ], "function": [ { "annotation": "2-oxoglutarate-dependent dioxygenase essential for auxin catabolism and maintenance of auxin homeostasis in reproductive organs. Catalyzes the irreversible oxidation of indole-3-acetic acid (IAA) to the biologically inactive 2-oxoindole-3-acetic acid (OxIAA).", "evidence": [ { "database": "UniProtKB", "id": "Q9XI76", "url": "https://www.uniprot.org/uniprotkb/Q9XI76#function" }, { "database": "UniProtKB", "id": "ARBA00054658", "url": "https://www.uniprot.org/uniprotkb/ARBA00054658#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9XI76", "url": "https://www.uniprot.org/uniprotkb/Q9XI76" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "ATDAO2", "url": "https://www.uniprot.org/uniprotkb/Q9XI76", "locus": {} } ], "crossref": [ { "id": "AT1G14120", "url": "https://bar.utoronto.ca/thalemine/portal.do?externalids=AT1G14120", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "837971", "url": "https://www.ncbi.nlm.nih.gov/gene/837971", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR005123", "url": "https://www.ebi.ac.uk/interpro/entry/IPR005123", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR026992", "url": "https://www.ebi.ac.uk/interpro/entry/IPR026992", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR027443", "url": "https://www.ebi.ac.uk/interpro/entry/IPR027443", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR044861", "url": "https://www.ebi.ac.uk/interpro/entry/IPR044861", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR050231", "url": "https://www.ebi.ac.uk/interpro/entry/IPR050231", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT1G14120", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT1G14120", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "KYGKAMD", "url": "https://omabrowser.org/oma/group/KYGKAMD/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "Q9XI76", "url": "https://www.orthodb.org/?gene=Q9XI76", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR47990", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR47990", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF03171", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF03171", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF14226", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF14226", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_001322167", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001322167", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT1G14120", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT1G14120", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9XI76", "url": "https://www.uniprot.org/uniprotkb/Q9XI76", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9XI76-1", "url": "https://www.uniprot.org/uniprotkb/Q9XI76-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MAEVNGVIPTIDLEEVNDQILNEKIREASERWGCFTVINHGVSLSLMAEMKKTVRDLHERPYEMKLRNTDVLLGNGYKPLSEFNPFYESFGLFDMASPQAVNSFCDKLDASPDQREILLKYAKATDDLARSLARRLAESYGVVEPNFLRGWPSQFRMNKYHFKPDSVGKLGVILHTDPGFLTILQGDEDVGGLEAMDNSSGSFFPIHTLPNTLLVNLGDMATIWSNGRLCNVKHRVQCIEAKMRITIASFLLGPVDRDLEAPDEFVDAEHPRLYKPISDGGLRKIRLSKHLHAGESLKFITINELSDVPKID", "length": 312, "header": "tr|Q9XI76-1|Q9XI76_ARATH Isoform 1 of 2-oxoglutarate-dependent dioxygenase DAO OS=Arabidopsis thaliana OX=3702 GN=ATDAO2 PE=1 SV=1 CANONICAL=Q9XI76-1" }, "isoforms": [ { "isoform_ac": 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"MACRAKELVSLILYKICNPKRSDSKIEEHVEEVEDLKAEAELFRSGSKIEKHVEELEDLKAEAELFRLKAISGTEELKAVADVKRLRTILENNSGTSEECKGEMLKEDLFLPSDLVRLILSRLSFKDNIRSSTVCKAWGDIAASVRVKSRRCWLLYHDAFQDKGVSYGFFDPVEKKKTKEMNLPELSKSSGILYSKDGWLLMNDSLSLIADMYFFNPFTRERIDLPRNRIMESVHTNFAFSCAPTKKSCLVFGINNISSSVAIKISTWRPGATTWLHEDFPNLFPSYFRRLGNILYSDGLFYTASETALGVFDPTARTWNVLPVQPIPMAPRSIRWMTEYEGHIFLVDASSLEPMVYRLNRLESVWEKKETLDGSSIFLSDGSCVMTYGLTGSMSNILYFWSRFINERRSTKSPCPFSRNHPYKYSLYSRSSCEDPEGYYFEYLTWGQKVGVWIEPPHSISIYDYSILDPSEAVNTEYVFI", "length": 481, "header": "sp|Q9XIA2-1|FB49_ARATH Isoform 1 of F-box protein At1g49360 OS=Arabidopsis thaliana OX=3702 GN= PE=2 SV=1 CANONICAL=Q9XIA2-1" }, "isoforms": [ { "isoform_ac": "A0A1P8AVW1-1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AVW1/entry", "sequence": { "sequence": 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"sequence": { "sequence": "MACRAKELVSLILYKICNPKRSDSKIEEHVEEVEDLKAEAELFRLKAISGTEELKAVADVKRLRTILENNSGTSEECKGEMLKEDLFLPSDLVRLILSRLSFKDNIRSSTVCKAWGDIAASVRVKSRRCWLLYHDAFQDKGVSYGFFDPVEKKKTKEMNLPELSKSSGILYSKDGWLLMNDSLSLIADMYFFNPFTRERIDLPRNRIMESVHTNFAFSCAPTKKSCLVFGINNISSSVAIKISTWRPGATTWLHEDFPNLFPSYFRRLGNILYSDGLFYTASETALGVFDPTARTWNVLPVQPIPMAPRSIRWMTEYEGHIFLVDASSLEPMVYRLNRLESVWEKKETLDGSSIFLSDGSCVMTYGLTGSMSNILYFWSRFINERRSTKSPCPFSRNHPYKYSLYSRSSCEDPEGYYFEYLTWGQKVGVWIEPPHSISIYDYSILDPSEAVNTEYVFI", "length": 458, "header": "tr|A0A1P8AVW3-1|A0A1P8AVW3_ARATH Computationally mapped isoform of F-box family protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9XIA2-1" }, "locus": { "chromosome": "1", "start_pos": 18267338, "end_pos": 18269448, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT1G49360.5", "url": "https://www.ensemblgenomes.org/id/AT1G49360.5" }, { "database": "Ensembl Peptide", "id": "AT1G49360.5", "url": "https://www.ensemblgenomes.org/id/AT1G49360.5" } ] } }, { "isoform_ac": "Q9XIA2-1", "url": "https://www.uniprot.org/uniprotkb/Q9XIA2/entry#Q9XIA2-1", "sequence": { "sequence": "MACRAKELVSLILYKICNPKRSDSKIEEHVEEVEDLKAEAELFRSGSKIEKHVEELEDLKAEAELFRLKAISGTEELKAVADVKRLRTILENNSGTSEECKGEMLKEDLFLPSDLVRLILSRLSFKDNIRSSTVCKAWGDIAASVRVKSRRCWLLYHDAFQDKGVSYGFFDPVEKKKTKEMNLPELSKSSGILYSKDGWLLMNDSLSLIADMYFFNPFTRERIDLPRNRIMESVHTNFAFSCAPTKKSCLVFGINNISSSVAIKISTWRPGATTWLHEDFPNLFPSYFRRLGNILYSDGLFYTASETALGVFDPTARTWNVLPVQPIPMAPRSIRWMTEYEGHIFLVDASSLEPMVYRLNRLESVWEKKETLDGSSIFLSDGSCVMTYGLTGSMSNILYFWSRFINERRSTKSPCPFSRNHPYKYSLYSRSSCEDPEGYYFEYLTWGQKVGVWIEPPHSISIYDYSILDPSEAVNTEYVFI", "length": 481, "header": "sp|Q9XIA2-1|FB49_ARATH Isoform 1 of F-box protein At1g49360 OS=Arabidopsis thaliana OX=3702 GN= PE=2 SV=1 CANONICAL=Q9XIA2-1" }, "locus": { "chromosome": "1", "start_pos": 18267231, "end_pos": 18269448, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT1G49360.1", "url": "https://www.ensemblgenomes.org/id/AT1G49360.1" }, { "database": "Ensembl Peptide", "id": "AT1G49360.1", "url": "https://www.ensemblgenomes.org/id/AT1G49360.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Theologis A, Ecker J R, Palm C J, Federspiel N A, Kaul S, White O, Alonso J, Altafi H, Araujo R, Bowman C L, Brooks S Y, Buehler E, Chan A, Chao Q, Chen H, Cheuk R F, Chin C W, Chung M K, Conn L, Conway A B, Conway A R, Creasy T H, Dewar K, Dunn P, Etgu P, Feldblyum T V, Feng J, Fong B, Fujii C Y, Gill J E, Goldsmith A D, Haas B, Hansen N F, Hughes B, Huizar L, Hunter J L, Jenkins J, Johnson-Hopson C, Khan S, Khaykin E, Kim C J, Koo H L, Kremenetskaia I, Kurtz D B, Kwan A, Lam B, Langin-Hooper S, Lee A, Lee J M, Lenz C A, Li J H, Li Y, Lin X, Liu S X, Liu Z A, Luros J S, Maiti R, Marziali A, Militscher J, Miranda M, Nguyen M, Nierman W C, Osborne B I, Pai G, Peterson J, Pham P K, Rizzo M, Rooney T, Rowley D, Sakano H, Salzberg S L, Schwartz J R, Shinn P, Southwick A M, Sun H, Tallon L J, Tambunga G, Toriumi M J, Town C D, Utterback T, Van Aken S, Vaysberg M, Vysotskaia V S, Walker M, Wu D, Yu G, Fraser C M, Venter J C, Davis R W", "evidence": [ { "database": "UniProtKB", "id": "Q9XIA2", "url": "https://www.uniprot.org/uniprotkb/Q9XIA2" } ], "reference": [ { "type": "PubMed", "id": "11130712", "url": "https://glygen.org/publication/PubMed/11130712" } ] }, { "title": "Empirical analysis of transcriptional activity in the Arabidopsis genome.", "journal": "Science", "date": "2003", "authors": "Yamada Kayoko, Lim Jun, Dale Joseph M, Chen Huaming, Shinn Paul, Palm Curtis J, Southwick Audrey M, Wu Hank C, Kim Christopher, Nguyen Michelle, Pham Paul, Cheuk Rosa, Karlin-Newmann George, Liu Shirley X, Lam Bao, Sakano Hitomi, Wu Troy, Yu Guixia, Miranda Molly, Quach Hong L, Tripp Matthew, Chang Charlie H, Lee Jeong M, Toriumi Mitsue, Chan Marie M H, Tang Carolyn C, Onodera Courtney S, Deng Justine M, Akiyama Kenji, Ansari Yasser, Arakawa Takahiro, Banh Jenny, Banno Fumika, Bowser Leah, Brooks Shelise, Carninci Piero, Chao Qimin, Choy Nathan, Enju Akiko, Goldsmith Andrew D, Gurjal Mani, Hansen Nancy F, Hayashizaki Yoshihide, Johnson-Hopson Chanda, Hsuan Vickie W, Iida Kei, Karnes Meagan, Khan Shehnaz, Koesema Eric, Ishida Junko, Jiang Paul X, Jones Ted, Kawai Jun, Kamiya Asako, Meyers Cristina, Nakajima Maiko, Narusaka Mari, Seki Motoaki, Sakurai Tetsuya, Satou Masakazu, Tamse Racquel, Vaysberg Maria, Wallender Erika K, Wong Cecilia, Yamamura Yuki, Yuan Shiaulou, Shinozaki Kazuo, Davis Ronald W, Theologis Athanasios, Ecker Joseph R", "evidence": [ { "database": "UniProtKB", "id": "Q9XIA2", "url": "https://www.uniprot.org/uniprotkb/Q9XIA2" } ], "reference": [ { "type": "PubMed", "id": "14593172", "url": "https://glygen.org/publication/PubMed/14593172" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis 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"IPR018253", "url": "https://www.ebi.ac.uk/interpro/entry/IPR018253", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036869", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036869", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR051339", "url": "https://www.ebi.ac.uk/interpro/entry/IPR051339", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT1G59725", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT1G59725", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "SHSFNFH", "url": "https://omabrowser.org/oma/group/SHSFNFH/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "Q9XIF5", "url": "https://www.orthodb.org/?gene=Q9XIF5", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR24078", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24078", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR24078:SF175", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24078:SF175", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00226", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00226", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF01556", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF01556", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "AT1G59725", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT1G59725", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9XIF5", "url": "https://www.uniprot.org/uniprotkb/Q9XIF5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9XIF5-1", "url": "https://www.uniprot.org/uniprotkb/Q9XIF5-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MGVDYYNVLNVNPSATEDDLKKSYRRLAMKWHPDKNPTSIKQEAEAKFKQISEAYDVLSDPNKRQIYDQYGEDGLTATEATASSQQHNYSSGNNNNYNAGFRYYPRDAEDIFAEFFGASEKVFDGGVGGGGRFKSAEAGSQTNRKTPVNRKAPAIESKLACTLEELYKGGRRKMKISRVVPDGLGKSKPVEEILKIDITPGWKKGTKITFPEKGNQEPGVTPADLIFVIDEKPHSVYKRDGNDLIVDKKVSLLEALTGITLSLTTLDGRNLTIPVLDIVKPGQEIVIPSEGMPISKEGSKRGDLRINFEICFPSRLTSEQKTDLKRVLGGS", "length": 331, "header": "tr|Q9XIF5-1|Q9XIF5_ARATH Isoform 1 of DNAJ heat shock family protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9XIF5-1" }, "isoforms": [ { "isoform_ac": "Q9XIF5-1", "url": "https://www.uniprot.org/uniprotkb/Q9XIF5/entry", "sequence": { "sequence": "MGVDYYNVLNVNPSATEDDLKKSYRRLAMKWHPDKNPTSIKQEAEAKFKQISEAYDVLSDPNKRQIYDQYGEDGLTATEATASSQQHNYSSGNNNNYNAGFRYYPRDAEDIFAEFFGASEKVFDGGVGGGGRFKSAEAGSQTNRKTPVNRKAPAIESKLACTLEELYKGGRRKMKISRVVPDGLGKSKPVEEILKIDITPGWKKGTKITFPEKGNQEPGVTPADLIFVIDEKPHSVYKRDGNDLIVDKKVSLLEALTGITLSLTTLDGRNLTIPVLDIVKPGQEIVIPSEGMPISKEGSKRGDLRINFEICFPSRLTSEQKTDLKRVLGGS", "length": 331, "header": "tr|Q9XIF5-1|Q9XIF5_ARATH Isoform 1 of DNAJ heat shock family protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9XIF5-1" }, "locus": { "chromosome": "1", "start_pos": 21950503, "end_pos": 21952491, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT1G59725.1", "url": "https://www.ensemblgenomes.org/id/AT1G59725.1" }, { "database": "Ensembl Peptide", "id": "AT1G59725.1", "url": "https://www.ensemblgenomes.org/id/AT1G59725.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Theologis A, Ecker J R, Palm C J, Federspiel N A, Kaul S, White O, Alonso J, Altafi H, Araujo R, Bowman C L, Brooks S Y, Buehler E, Chan A, Chao Q, Chen H, Cheuk R F, Chin C W, Chung M K, Conn L, Conway A B, Conway A R, Creasy T H, Dewar K, Dunn P, Etgu P, Feldblyum T V, Feng J, Fong B, Fujii C Y, Gill J E, Goldsmith A D, Haas B, Hansen N F, Hughes B, Huizar L, Hunter J L, Jenkins J, Johnson-Hopson C, Khan S, Khaykin E, Kim C J, Koo H L, Kremenetskaia I, Kurtz D B, Kwan A, Lam B, Langin-Hooper S, Lee A, Lee J M, Lenz C A, Li J H, Li Y, Lin X, Liu S X, Liu Z A, Luros J S, Maiti R, Marziali A, Militscher J, Miranda M, Nguyen M, Nierman W C, Osborne B I, Pai G, Peterson J, Pham P K, Rizzo M, Rooney T, Rowley D, Sakano H, Salzberg S L, Schwartz J R, Shinn P, Southwick A M, Sun H, Tallon L J, Tambunga G, Toriumi M J, Town C D, Utterback T, Van Aken S, Vaysberg M, Vysotskaia V S, Walker M, Wu D, Yu G, Fraser C M, Venter J C, Davis R W", "evidence": [ { "database": "UniProtKB", "id": "Q9XIF5", "url": "https://www.uniprot.org/uniprotkb/Q9XIF5" } ], "reference": [ { "type": "PubMed", "id": "11130712", "url": "https://glygen.org/publication/PubMed/11130712" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9XIF5", "url": "https://www.uniprot.org/uniprotkb/Q9XIF5" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT1G59725", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT1G59725", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "D3ZUU5-1", "protein_name": "DnaJ heat shock protein family (Hsp40) member B1", "gene_name": "Dnajb1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSCVTQRAAAIGRCGATHREGRKVLEGWRDLEASAGRVYRVRDGAAAEPEAATAGRRWPWARTTTRRWAWPAARPTTRSSGPTAARRCATTRTRTRSPAPRRSSRRSPRPTTCSATRASARFSTAMERKVRVRAARVTRRLTGEETEALGASLRLRRGTDGPGIPRRRCLLHLLSNRRPQTGGGALGLKGGGPSGGSSGGANGTSFSYTFHGDPHAMFAEFFGGRNPFDTFFGQRNGEEGMDIDDPFSSFPMGMGGFTNMNFGRSRPTQEPTRKKQDPPVTHDLRVSLEEIYSGCTKKMKISHKRLNPDGKSIRNEDKILTIEVKRGWKEGTKITFPKEGDQTSNNIPADIVFVLKDKPHNIFKRDGSDVIYPARISLREALCGCTVNVPTLDGRTIPVVFKDVIRPGMRRKVPGEGLPLPKTPEKRGDLVIEFEVIFPDRIPISSRTILEQVLPI", "length": 456 }, "evidence": [ { "id": "Q9XIF5", "url": "https://omabrowser.org/oma/group/Q9XIF5/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P25685-1", "protein_name": "DnaJ homolog subfamily B member 1", "gene_name": "DNAJB1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MGKDYYQTLGLARGASDEEIKRAYRRQALRYHPDKNKEPGAEEKFKEIAEAYDVLSDPRKREIFDRYGEEGLKGSGPSGGSGGGANGTSFSYTFHGDPHAMFAEFFGGRNPFDTFFGQRNGEEGMDIDDPFSGFPMGMGGFTNVNFGRSRSAQEPARKKQDPPVTHDLRVSLEEIYSGCTKKMKISHKRLNPDGKSIRNEDKILTIEVKKGWKEGTKITFPKEGDQTSNNIPADIVFVLKDKPHNIFKRDGSDVIYPARISLREALCGCTVNVPTLDGRTIPVVFKDVIRPGMRRKVPGEGLPLPKTPEKRGDLIIEFEVIFPERIPQTSRTVLEQVLPI", "length": 340 }, "evidence": [ { "id": "Q9XIF5", "url": "https://omabrowser.org/oma/group/Q9XIF5/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q9VPY9-1", "protein_name": "J domain-containing protein", "gene_name": "Dmel\\CG5001", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": 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"sequon_annotation_sites": [ { "start_pos": 270, "end_pos": 272 }, { "start_pos": 88, "end_pos": 90 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 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Huizar L, Hunter J L, Jenkins J, Johnson-Hopson C, Khan S, Khaykin E, Kim C J, Koo H L, Kremenetskaia I, Kurtz D B, Kwan A, Lam B, Langin-Hooper S, Lee A, Lee J M, Lenz C A, Li J H, Li Y, Lin X, Liu S X, Liu Z A, Luros J S, Maiti R, Marziali A, Militscher J, Miranda M, Nguyen M, Nierman W C, Osborne B I, Pai G, Peterson J, Pham P K, Rizzo M, Rooney T, Rowley D, Sakano H, Salzberg S L, Schwartz J R, Shinn P, Southwick A M, Sun H, Tallon L J, Tambunga G, Toriumi M J, Town C D, Utterback T, Van Aken S, Vaysberg M, Vysotskaia V S, Walker M, Wu D, Yu G, Fraser C M, Venter J C, Davis R W", "evidence": [ { "database": "UniProtKB", "id": "Q9XIF7", "url": "https://www.uniprot.org/uniprotkb/Q9XIF7" } ], "reference": [ { "type": "PubMed", "id": "11130712", "url": "https://glygen.org/publication/PubMed/11130712" } ] }, { "title": "Large-scale phosphorylation mapping reveals the extent of tyrosine phosphorylation in Arabidopsis.", "journal": "Molecular systems biology", "date": "2008", "authors": 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"https://glygen.org/publication/PubMed/19376835" } ] }, { "title": "Large-scale comparative phosphoproteomics identifies conserved phosphorylation sites in plants.", "journal": "Plant physiology", "date": "2010-07", "authors": "Nakagami Hirofumi, Sugiyama Naoyuki, Mochida Keiichi, Daudi Arsalan, Yoshida Yuko, Toyoda Tetsuro, Tomita Masaru, Ishihama Yasushi, Shirasu Ken", "evidence": [ { "database": "iPTMnet", "id": "Q9LQ43", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9LQ43" } ], "reference": [ { "type": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" } ] }, { "title": "Comparative phosphoproteome profiling reveals a function of the STN8 kinase in fine-tuning of cyclic electron flow (CEF).", "journal": "Proceedings of the National Academy of Sciences of the United States of America", "date": "2011-08-02", "authors": "Reiland Sonja, Finazzi Giovanni, Endler Anne, Willig Adrian, Baerenfaller Katja, Grossmann Jonas, Gerrits Bertran, Rutishauser Dorothea, Gruissem Wilhelm, Rochaix Jean-David, Baginsky Sacha", "evidence": [ { "database": "iPTMnet", "id": "Q9XIF7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9XIF7" } ], "reference": [ { "type": "PubMed", "id": "21768351", "url": "https://glygen.org/publication/PubMed/21768351" } ] }, { "title": "A large-scale protein phosphorylation analysis reveals novel phosphorylation motifs and phosphoregulatory networks in Arabidopsis.", "journal": "Journal of proteomics", "date": "2013-01-14", "authors": "Wang Xu, Bian Yangyang, Cheng Kai, Gu Li-Fei, Ye Mingliang, Zou Hanfa, Sun Samuel Sai-Ming, He Jun-Xian", "evidence": [ { "database": "iPTMnet", "id": "Q9XIF7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9XIF7" } ], "reference": [ { "type": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" } ] }, { "title": "Identification of novel in vivo MAP kinase substrates in Arabidopsis thaliana through use of tandem metal oxide affinity chromatography.", "journal": "Molecular & cellular proteomics : MCP", "date": "2013-02", "authors": "Hoehenwarter Wolfgang, Thomas Martin, Nukarinen Ella, Egelhofer Volker, R\u00f6hrig Horst, Weckwerth Wolfram, Conrath Uwe, Beckers Gerold J M", "evidence": [ { "database": "iPTMnet", "id": "Q9XIF7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9XIF7" } ], "reference": [ { "type": "PubMed", "id": "23172892", "url": "https://glygen.org/publication/PubMed/23172892" } ] }, { "title": "Genetics and phosphoproteomics reveal a protein phosphorylation network in the abscisic acid signaling pathway in Arabidopsis thaliana.", "journal": "Science signaling", "date": "2013-04-09", "authors": "Umezawa Taishi, Sugiyama Naoyuki, Takahashi Fuminori, Anderson Jeffrey C, Ishihama Yasushi, Peck Scott C, Shinozaki Kazuo", "evidence": [ { "database": "iPTMnet", "id": "Q9XIF7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9XIF7" } ], 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of B3 domain-containing protein At1g10455 OS=Arabidopsis thaliana OX=3702 GN= PE=2 SV=1 CANONICAL=Q9XIK5-1" }, "isoforms": [ { "isoform_ac": "Q9XIK5-1", "url": "https://www.uniprot.org/uniprotkb/Q9XIK5/entry#Q9XIK5-1", "sequence": { "sequence": "MAQNKNLNLELSLSQYVEDDPWVLKKKLSDSDLYYSAQLYLPKQEMEHFVLPEMDHDLVRKLGAGVEVKVRDVDSVDDFYTVRLKVRNGQYYLGKGWGLIKNAKVLNTGDHIGLFWDKLTREVKFKHFKSQSITMHREAGTTSTQKNVLQKK", "length": 152, "header": "sp|Q9XIK5-1|Y1045_ARATH Isoform 1 of B3 domain-containing protein At1g10455 OS=Arabidopsis thaliana OX=3702 GN= PE=2 SV=1 CANONICAL=Q9XIK5-1" }, "locus": { "chromosome": "1", "start_pos": 3438555, "end_pos": 3439013, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT1G10455.1", "url": "https://www.ensemblgenomes.org/id/AT1G10455.1" }, { "database": "Ensembl Peptide", "id": "AT1G10455.1", "url": "https://www.ensemblgenomes.org/id/AT1G10455.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": 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"PF14543", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF14543", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "AT1G64830", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT1G64830", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9XIR2", "url": "https://www.uniprot.org/uniprotkb/Q9XIR2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9XIR2-1", "url": "https://www.uniprot.org/uniprotkb/Q9XIR2-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MASLIFATLLSLLLLSNVNAYPKDGFTIDLIHRDSPKSPFYNSAETSSQRMRNAIRRSARSTLQFSNDDASPNSPQSFITSNRGEYLMNISIGTPPVPILAIADTGSDLIWTQCNPCEDCYQQTSPLFDPKESSTYRKVSCSSSQCRALEDASCSTDENTCSYTITYGDNSYTKGDVAVDTVTMGSSGRRPVSLRNMIIGCGHENTGTFDPAGSGIIGLGGGSTSLVSQLRKSINGKFSYCLVPFTSETGLTSKINFGTNGIVSGDGVVSTSMVKKDPATYYFLNLEAISVGSKKIQFTSTIFGTGEGNIVIDSGTTLTLLPSNFYYELESVVASTIKAERVQDPDGILSLCYRDSSSFKVPDITVHFKGGDVKLGNLNTFVAVSEDVSCFAFAANEQLTIFGNLAQMNFLVGYDTVSGTVSFKKTDCSQM", "length": 431, "header": "tr|Q9XIR2-1|Q9XIR2_ARATH Isoform 1 of Eukaryotic aspartyl protease family protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9XIR2-1" }, "isoforms": [ { "isoform_ac": "Q9XIR2-1", "url": "https://www.uniprot.org/uniprotkb/Q9XIR2/entry", "sequence": { "sequence": 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Toriumi M J, Town C D, Utterback T, Van Aken S, Vaysberg M, Vysotskaia V S, Walker M, Wu D, Yu G, Fraser C M, Venter J C, Davis R W", "evidence": [ { "database": "UniProtKB", "id": "Q9XIR2", "url": "https://www.uniprot.org/uniprotkb/Q9XIR2" } ], "reference": [ { "type": "PubMed", "id": "11130712", "url": "https://glygen.org/publication/PubMed/11130712" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9XIR2", "url": "https://www.uniprot.org/uniprotkb/Q9XIR2" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT1G64830", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT1G64830", "resource": "KEGG Pathway" } ], 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"MMGLSSLVFTEFHSLGFSDLIVFVAPLWIAVAAGVLVGWVWRPKWAYLDSKLLSNSPKFLNLQLPTSILKTSSHHVNPSLSSKEKTGFVTDDDFRHLWKLVEVKDGGPCWIQMMDRSTPTFSYQAWRRDPENGPPQYRSRTVFEDATPEMVRDFFWDDEFRSKWDDMLLYSSTLERCKDTGTMVVQWVRKFPFFCSDREYIIGRRIWDAGRVFYCITKGVQYPSVPRQNKPRRVDLYYSSWCIRAVESKRGDGEMTSCEVLLFHHEDMGIPWEIAKLGVRQGMWGAVKKIEPGLRAYQRAKAAGAGLSPSAIMAHINTKVSAEEFMNERGSIAEVTGDKPTGKNIPKILVVGGAIALACTLDKGLLTKAVIFGVARRFARMGKRM", "length": 385, "header": "tr|Q9XIR9-1|Q9XIR9_ARATH Isoform 1 of Polyketide cyclase/dehydrase and lipid transport superfamily protein OS=Arabidopsis thaliana OX=3702 GN=CP5 PE=1 SV=1 CANONICAL=Q9XIR9-1" }, "isoforms": [ { "isoform_ac": "Q9XIR9-1", "url": "https://www.uniprot.org/uniprotkb/Q9XIR9/entry", "sequence": { "sequence": "MMGLSSLVFTEFHSLGFSDLIVFVAPLWIAVAAGVLVGWVWRPKWAYLDSKLLSNSPKFLNLQLPTSILKTSSHHVNPSLSSKEKTGFVTDDDFRHLWKLVEVKDGGPCWIQMMDRSTPTFSYQAWRRDPENGPPQYRSRTVFEDATPEMVRDFFWDDEFRSKWDDMLLYSSTLERCKDTGTMVVQWVRKFPFFCSDREYIIGRRIWDAGRVFYCITKGVQYPSVPRQNKPRRVDLYYSSWCIRAVESKRGDGEMTSCEVLLFHHEDMGIPWEIAKLGVRQGMWGAVKKIEPGLRAYQRAKAAGAGLSPSAIMAHINTKVSAEEFMNERGSIAEVTGDKPTGKNIPKILVVGGAIALACTLDKGLLTKAVIFGVARRFARMGKRM", "length": 385, "header": "tr|Q9XIR9-1|Q9XIR9_ARATH Isoform 1 of Polyketide cyclase/dehydrase and lipid transport superfamily protein OS=Arabidopsis thaliana OX=3702 GN=CP5 PE=1 SV=1 CANONICAL=Q9XIR9-1" }, "locus": { "chromosome": "1", "start_pos": 24046553, "end_pos": 24048822, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT1G64720.1", "url": "https://www.ensemblgenomes.org/id/AT1G64720.1" }, { "database": "Ensembl Peptide", "id": "AT1G64720.1", "url": "https://www.ensemblgenomes.org/id/AT1G64720.1" } ] } } ], "glycosylation": [], "phosphorylation": [ { "start_pos": 66, "end_pos": 66, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Thr", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9XIR9", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9XIR9" } ], "site_lbl": "Thr66" }, { "start_pos": 67, "end_pos": 67, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9XIR9", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9XIR9" } ], "site_lbl": "Ser67" } ], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Theologis A, Ecker J R, Palm C J, Federspiel N A, Kaul S, White O, Alonso J, Altafi H, Araujo R, Bowman C L, Brooks S Y, Buehler E, Chan A, Chao Q, Chen H, Cheuk R F, Chin C W, Chung M K, Conn L, Conway A B, Conway A R, Creasy T H, Dewar K, Dunn P, Etgu P, Feldblyum T V, Feng J, Fong B, Fujii C Y, Gill J E, Goldsmith A D, Haas B, Hansen N F, Hughes B, Huizar L, Hunter J L, Jenkins J, Johnson-Hopson C, Khan S, Khaykin E, Kim C J, Koo H L, Kremenetskaia I, Kurtz D B, Kwan A, Lam B, Langin-Hooper S, Lee A, Lee J M, Lenz C A, Li J H, Li Y, Lin X, Liu S X, Liu Z A, Luros J S, Maiti R, Marziali A, Militscher J, Miranda M, Nguyen M, Nierman W C, Osborne B I, Pai G, Peterson J, Pham P K, Rizzo M, Rooney T, Rowley D, Sakano H, Salzberg S L, Schwartz J R, Shinn P, Southwick A M, Sun H, Tallon L J, Tambunga G, Toriumi M J, Town C D, Utterback T, Van Aken S, Vaysberg M, Vysotskaia V S, Walker M, Wu D, Yu G, Fraser C M, Venter J C, Davis R W", "evidence": [ { "database": "UniProtKB", "id": "Q9XIR9", "url": "https://www.uniprot.org/uniprotkb/Q9XIR9" } ], "reference": [ { "type": "PubMed", "id": "11130712", "url": "https://glygen.org/publication/PubMed/11130712" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9XIR9", "url": "https://www.uniprot.org/uniprotkb/Q9XIR9" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT1G64720", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT1G64720", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "Q9XIR9", "url": "https://www.uniprot.org/uniprotkb/Q9XIR9" } ], "pmid": "" }, { "name": "vacuole", "id": "GO:0005773", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005773", "evidence": [ { "database": "UniProtKB", "id": "Q9XIR9", "url": "https://www.uniprot.org/uniprotkb/Q9XIR9" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "lipid binding", "id": "GO:0008289", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008289", "evidence": [ { "database": "UniProtKB", "id": "Q9XIR9", "url": "https://www.uniprot.org/uniprotkb/Q9XIR9" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "Q9XIR9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9XIR9" }, { "id": "PS50848", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50848" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "START", "eco_id": "ECO_0000259", "start_pos": 110, "end_pos": 299, "start_aa": "Trp", "end_aa": "Arg", "glycosite_overlap": [] } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [ 66, 67 ], "sequon_annotation_sites": [] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": 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"Q9XIS1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9XIS1" } ] } ], "protein_names": [ { "name": "DUF4228 domain protein", "type": "synonym", "evidence": [ { "id": "Q9XIS1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9XIS1/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9XIS1", "url": "https://www.uniprot.org/uniprotkb/Q9XIS1" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9XIS1", "locus": {} } ], "crossref": [ { "id": "AT1G64700", "url": "https://bar.utoronto.ca/thalemine/portal.do?externalids=AT1G64700", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "842778", "url": "https://www.ncbi.nlm.nih.gov/gene/842778", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR025322", "url": "https://www.ebi.ac.uk/interpro/entry/IPR025322", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT1G64700", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT1G64700", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "CHVRSNS", "url": "https://omabrowser.org/oma/group/CHVRSNS/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR33148", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR33148", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR33148:SF48", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR33148:SF48", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF14009", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF14009", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "AT1G64700", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT1G64700", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9XIS1", "url": "https://www.uniprot.org/uniprotkb/Q9XIS1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9XIS1-1", "url": "https://www.uniprot.org/uniprotkb/Q9XIS1-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MGNCLFGGLGDEEEDLLIKVIKSDGGVLEFYSPVTAGFVSHGFSGHALFSAVDLLWKPLAHDHLLVPGQSYYLFPNIVSDELKTFVGSCHVRSNSESLSAITPYRMSLDYNHRVLKRSYTDVFSRNSHIRTRQKEKKTRRRRTSSKGAIWKVNLIINTEELLQILSEDGRTNELIESVRAVAKGETSSITSSSSENFLSVVQT", "length": 203, "header": "tr|Q9XIS1-1|Q9XIS1_ARATH Isoform 1 of DUF4228 domain protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9XIS1-1" }, "isoforms": [ { "isoform_ac": "Q9XIS1-1", "url": "https://www.uniprot.org/uniprotkb/Q9XIS1/entry", "sequence": { "sequence": "MGNCLFGGLGDEEEDLLIKVIKSDGGVLEFYSPVTAGFVSHGFSGHALFSAVDLLWKPLAHDHLLVPGQSYYLFPNIVSDELKTFVGSCHVRSNSESLSAITPYRMSLDYNHRVLKRSYTDVFSRNSHIRTRQKEKKTRRRRTSSKGAIWKVNLIINTEELLQILSEDGRTNELIESVRAVAKGETSSITSSSSENFLSVVQT", "length": 203, "header": "tr|Q9XIS1-1|Q9XIS1_ARATH Isoform 1 of DUF4228 domain protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9XIS1-1" }, "locus": { "chromosome": "1", "start_pos": 24039706, "end_pos": 24040636, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT1G64700.1", "url": "https://www.ensemblgenomes.org/id/AT1G64700.1" }, { "database": "Ensembl Peptide", "id": "AT1G64700.1", "url": "https://www.ensemblgenomes.org/id/AT1G64700.1" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "other", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 35, "start_aa": "Thr", "end_pos": 35, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr35", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ], "filter_code": "000000000000000010000.00000000001000.0.01000" } ], "phosphorylation": [ { "start_pos": 120, "end_pos": 120, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Thr", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9XIS1", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9XIS1" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ], "site_lbl": "Thr120" } ], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Theologis A, Ecker J R, Palm C J, Federspiel N A, Kaul S, White O, Alonso J, Altafi H, Araujo R, Bowman C L, Brooks S Y, Buehler E, Chan A, Chao Q, Chen H, Cheuk R F, Chin C W, Chung M K, Conn L, Conway A B, Conway A R, Creasy T H, Dewar K, Dunn P, Etgu P, Feldblyum T V, Feng J, Fong B, Fujii C Y, Gill J E, Goldsmith A D, Haas B, Hansen N F, Hughes B, Huizar L, Hunter J L, Jenkins J, Johnson-Hopson C, Khan S, Khaykin E, Kim C J, Koo H L, Kremenetskaia I, Kurtz D B, Kwan A, Lam B, Langin-Hooper S, Lee A, Lee J M, Lenz C A, Li J H, Li Y, Lin X, Liu S X, Liu Z A, Luros J S, Maiti R, Marziali A, Militscher J, Miranda M, Nguyen M, Nierman W C, Osborne B I, Pai G, Peterson J, Pham P K, Rizzo M, Rooney T, Rowley D, Sakano H, Salzberg S L, Schwartz J R, Shinn P, Southwick A M, Sun H, Tallon L J, Tambunga G, Toriumi M J, Town C D, Utterback T, Van Aken S, Vaysberg M, Vysotskaia V S, Walker M, Wu D, Yu G, Fraser C M, Venter J C, Davis R W", "evidence": [ { "database": "UniProtKB", "id": "Q9XIS1", "url": "https://www.uniprot.org/uniprotkb/Q9XIS1" } ], "reference": [ { "type": "PubMed", "id": "11130712", "url": "https://glygen.org/publication/PubMed/11130712" } ] }, { "title": "Quantitative phosphoproteomics of the ataxia telangiectasia-mutated (ATM) and ataxia telangiectasia-mutated and rad3-related (ATR) dependent DNA damage response in Arabidopsis thaliana.", "journal": "Molecular & cellular proteomics : MCP", "date": "2015-03", "authors": "Roitinger Elisabeth, Hofer Manuel, K\u00f6cher Thomas, Pichler Peter, Novatchkova Maria, Yang Jianhua, Schl\u00f6gelhofer Peter, Mechtler Karl", "evidence": [ { "database": "iPTMnet", "id": "Q9XIS1", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9XIS1" } ], "reference": [ { "type": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9XIS1", "url": "https://www.uniprot.org/uniprotkb/Q9XIS1" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT1G64700", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT1G64700", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q9XIS1", "url": "https://www.uniprot.org/uniprotkb/Q9XIS1" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "defense response to fungus", "id": "GO:0050832", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0050832", "evidence": 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Gill J E, Adams M D, Carrera A J, Creasy T H, Goodman H M, Somerville C R, Copenhaver G P, Preuss D, Nierman W C, White O, Eisen J A, Salzberg S L, Fraser C M, Venter J C", "evidence": [ { "database": "UniProtKB", "id": "Q9ZNQ5", "url": "https://www.uniprot.org/uniprotkb/Q9ZNQ5" } ], "reference": [ { "type": "PubMed", "id": "10617197", "url": "https://glygen.org/publication/PubMed/10617197" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9ZNQ5", "url": "https://www.uniprot.org/uniprotkb/Q9ZNQ5" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT2G01410", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT2G01410", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 4, "go_terms": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "Q9ZNQ5", "url": "https://www.uniprot.org/uniprotkb/Q9ZNQ5" } ], "pmid": "" }, { "name": "endoplasmic reticulum", "id": "GO:0005783", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005783", "evidence": [ { "database": "UniProtKB", "id": "Q9ZNQ5", "url": "https://www.uniprot.org/uniprotkb/Q9ZNQ5" } ], "pmid": "" }, { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "Q9ZNQ5", "url": "https://www.uniprot.org/uniprotkb/Q9ZNQ5" } ], "pmid": "" }, { "name": "plant-type vacuole", "id": "GO:0000325", "url": 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"MMERRRTALVLFVVVVVLTWQEGVLGKWLESTAKEKTGSWAGWVSDKITTGFGTKKEETGIYQKSKDEARKAAQAAENYAYDKANYVKDSAYDNAGYAKDFAENKAEYAKDFAYDKAGDAKNMAYENAGYAKDFAYDKAGDAKDMAYEKAGHAKDFAYDKAGNAKDMAYETAGYAKDFAYDKGGYAKDVAYDKAGNAKDMAYEKAGNAKDMAYEKAEHIKDFTYDKVGSAYGSAQSMMDSGYDKAGDAKDMAYEKAGIVKDMAYDKAGDAKDVAYEKAGIAKDMAYDKAGNAKDMAYDKVGSAYGSAQKAKDSGYEKAGEAKDYAYKKAGNAKDIAYEKAQDAKDFAYDKAGYGYDKAGDVIRMATDKSGEAYEGAKEKSKSAKDTAGEAMDDSIDYMKDKSHNAKDGATRGFEEAMEKVGEKYGVAKESTKYAYETAKKKASQVAGEIRDRYAEL", "length": 456, "header": "tr|Q9ZPW6-1|Q9ZPW6_ARATH Isoform 1 of Late embryogenesis abundant domain-containing protein / LEA domain-containing protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9ZPW6-1" }, "isoforms": [ { "isoform_ac": "A0A1P8AXM0-1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8AXM0/entry", "sequence": { "sequence": "MMERRRTALVLFVVVVVLTWQEGVLGKWLESTAKEKTGSWAGWVSDKITTGFGTKKEETGIYQKSKDEARKAAQAAENYAYDKANYVKDSAYDNAGYAKDFAENKAEYAKDFAYDKAGDAKDMAYEKAGHAKDFAYDKAGNAKDMAYETAGYAKDFAYDKGGYAKDVAYDKAGNAKDMAYEKAGNAKDMAYEKAEHIKDFTYDKVGSAYGSAQSMMDSGYDKAGDAKDMAYEKAGIVKDMAYDKAGDAKDVAYEKAGIAKDMAYDKAGNAKDMAYDKVGSAYGSAQKAKDSGYEKAGEAKDYAYKKAGNAKDIAYEKAQDAKDFAYDKAGYGYDKAGDVIRMATDKSGEAYEGAKEKSKSAKDTAGEAMDDSIDYMKDKSHNAKDGATRGFEEAMEKVGEKYGVAKESTKYAYETAKKKASQVAGEIRDRYAEL", "length": 434, "header": "tr|A0A1P8AXM0-1|A0A1P8AXM0_ARATH Computationally mapped isoform of Late embryogenesis abundant domain-containing protein / LEA domain-containing protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9ZPW6-1" }, "locus": { "chromosome": "2", "start_pos": 7969298, "end_pos": 7971025, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT2G18340.3", "url": "https://www.ensemblgenomes.org/id/AT2G18340.3" }, { "database": "Ensembl Peptide", "id": "AT2G18340.3", "url": 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"start_pos": 7969298, "end_pos": 7971114, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT2G18340.1", "url": "https://www.ensemblgenomes.org/id/AT2G18340.1" }, { "database": "Ensembl Peptide", "id": "AT2G18340.1", "url": "https://www.ensemblgenomes.org/id/AT2G18340.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "1999", "authors": "Lin X, Kaul S, Rounsley S, Shea T P, Benito M I, Town C D, Fujii C Y, Mason T, Bowman C L, Barnstead M, Feldblyum T V, Buell C R, Ketchum K A, Lee J, Ronning C M, Koo H L, Moffat K S, Cronin L A, Shen M, Pai G, Van Aken S, Umayam L, Tallon L J, Gill J E, Adams M D, Carrera A J, Creasy T H, Goodman H M, Somerville C R, Copenhaver G P, Preuss D, Nierman W C, White O, Eisen J A, Salzberg S L, Fraser C M, Venter J C", "evidence": [ { "database": "UniProtKB", "id": "Q9ZPW6", "url": "https://www.uniprot.org/uniprotkb/Q9ZPW6" } ], "reference": [ { "type": "PubMed", "id": "10617197", "url": "https://glygen.org/publication/PubMed/10617197" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9ZPW6", "url": "https://www.uniprot.org/uniprotkb/Q9ZPW6" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT2G18340", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT2G18340", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 3, "go_terms": [ { "name": "extracellular region", "id": "GO:0005576", "url": 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"ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "Q9ZPW6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9ZPW6" }, { "id": "PF02987", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF02987" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Late embryogenesis abundant protein ECP63-like", "eco_id": "ECO_0000259", "start_pos": 110, "end_pos": 153, "start_aa": "Lys", "end_aa": "Ala", "glycosite_overlap": [] } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [] }, "class_list": [], "section_stats": [ { 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"sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "Q9SGI3-1", "uniprot_ac": "Q9SGI3", "uniprot_id": "Q9SGI3_ARATH", "mass": { "chemical_mass": 33539.0, "monoisotopic_mass": 33539.0 }, "refseq": { "ac": "NP_566156", "name": "DHBP synthase RibB-like alpha/beta domain-containing protein", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_566156" }, "gene_names": [ { "name": "F28J7.25", "type": "synonym", "evidence": [ { "id": "NP_566156", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_566156" }, { "id": "Q9SGI3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SGI3" } ] } ], "protein_names": [ { "name": "Threonylcarbamoyl-AMP synthase", "type": "recommended", "evidence": [ { "id": "Q9SGI3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SGI3/entry#names_and_taxonomy" } ] }, { "name": "DHBP synthase RibB-like alpha/beta 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"https://www.uniprot.org/uniprotkb/Q9SGI3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9SGI3-1", "url": "https://www.uniprot.org/uniprotkb/Q9SGI3-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MAVAKLHGGGMAAMRLLLLPSPMTHRRPSTLPSTASLSPRRYIVALAAKRSPKRLKYSTPRFTKEGELVYIEVDPCGVDSWKLQPVIDLLKQGAVGVIPTDTVYAIACDCKNHSAVERLRRIKKIESSKPLSILCRSLRDIDTFTMGFPRGDGHGHANVFRAVKQCLPGPYTFILTASKELPKQCVGYGTTSVKYASRKNVGVRISDDALCQAILQQMDAPLICTSVKGPKENEWMIDPTAIGDIYGPEGLDFVVDGGIRVAEPSTIVDMTGPYPKVIREGKGPILPWMVVEDDESSLRQDLMASGT", "length": 307, "header": "tr|Q9SGI3-1|Q9SGI3_ARATH Isoform 1 of Threonylcarbamoyl-AMP synthase OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SGI3-1" }, "isoforms": [ { "isoform_ac": "A0A1I9LM38-1", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LM38/entry", "sequence": { "sequence": "MAVAKLHGGGMAAMRLLLLPSPMTHRRPSTLPSTASLSPRRYIVALAAKRSPKRLKYSTPRFTKEGELVYIEVDPCGVDSWKLQPVIDLLKQGAVGVIPTDTVYAIACDCKNHSAVERLRRIKKIESSKPLSILCRSLRDIDTFTMGFPRGDGHGHANVFRAVKQCLPGPYTFILTASKELPKQCVGYGTTSVKYASRKNVGVRISDDALCQAILQQMDAPLICTSVKGPKENEWMIDPTAIGDIYGPEVFIALTLSQRLKNIFGCSILCFGFLLQGLDFVVDGGIRVAEPSTIVDMTGPYPKVIREGKGPILPWMVVEDDESSLRQDLMASGT", "length": 334, "header": "tr|A0A1I9LM38-1|A0A1I9LM38_ARATH Computationally mapped isoform of Threonylcarbamoyl-AMP synthase OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SGI3-1" }, "locus": { "chromosome": "3", "start_pos": 317336, "end_pos": 319001, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G01920.2", "url": "https://www.ensemblgenomes.org/id/AT3G01920.2" }, { "database": "Ensembl Peptide", "id": "AT3G01920.2", "url": "https://www.ensemblgenomes.org/id/AT3G01920.2" } ] } }, { "isoform_ac": "Q9SGI3-1", "url": "https://www.uniprot.org/uniprotkb/Q9SGI3/entry", "sequence": { "sequence": "MAVAKLHGGGMAAMRLLLLPSPMTHRRPSTLPSTASLSPRRYIVALAAKRSPKRLKYSTPRFTKEGELVYIEVDPCGVDSWKLQPVIDLLKQGAVGVIPTDTVYAIACDCKNHSAVERLRRIKKIESSKPLSILCRSLRDIDTFTMGFPRGDGHGHANVFRAVKQCLPGPYTFILTASKELPKQCVGYGTTSVKYASRKNVGVRISDDALCQAILQQMDAPLICTSVKGPKENEWMIDPTAIGDIYGPEGLDFVVDGGIRVAEPSTIVDMTGPYPKVIREGKGPILPWMVVEDDESSLRQDLMASGT", "length": 307, "header": "tr|Q9SGI3-1|Q9SGI3_ARATH Isoform 1 of Threonylcarbamoyl-AMP synthase OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SGI3-1" }, "locus": { "chromosome": "3", "start_pos": 317336, "end_pos": 319121, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G01920.1", "url": "https://www.ensemblgenomes.org/id/AT3G01920.1" }, { "database": "Ensembl Peptide", "id": "AT3G01920.1", "url": "https://www.ensemblgenomes.org/id/AT3G01920.1" } ] } } ], "glycosylation": [], "phosphorylation": [ { "start_pos": 30, "end_pos": 30, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Thr", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SGI3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SGI3" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" } ], "site_lbl": "Thr30" }, { "start_pos": 34, "end_pos": 34, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Thr", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SGI3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SGI3" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" } ], "site_lbl": "Thr34" }, { "start_pos": 38, "end_pos": 38, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SGI3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SGI3" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" } ], "site_lbl": "Ser38" } ], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9SGI3", "url": "https://www.uniprot.org/uniprotkb/Q9SGI3" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "A large-scale protein phosphorylation analysis reveals novel phosphorylation motifs and phosphoregulatory networks in Arabidopsis.", "journal": "Journal of proteomics", "date": "2013-01-14", "authors": "Wang Xu, Bian Yangyang, Cheng Kai, Gu Li-Fei, Ye Mingliang, Zou Hanfa, Sun Samuel Sai-Ming, He Jun-Xian", "evidence": [ { "database": "iPTMnet", "id": "Q9SGI3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SGI3" } ], "reference": [ { "type": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9SGI3", "url": "https://www.uniprot.org/uniprotkb/Q9SGI3" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT3G01920", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G01920", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "double-stranded RNA binding", "id": "GO:0003725", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003725", "evidence": [ { "database": "UniProtKB", "id": "Q9SGI3", "url": "https://www.uniprot.org/uniprotkb/Q9SGI3" } ], "pmid": "" }, { "name": "mRNA binding", "id": "GO:0003729", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003729", "evidence": [ { "database": "UniProtKB", "id": "Q9SGI3", "url": "https://www.uniprot.org/uniprotkb/Q9SGI3" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": 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"kinase_gene_name", "residue", "comment", "site_lbl" ] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 3 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "Q9SU70-1", "uniprot_ac": "Q9SU70", "uniprot_id": "Q9SU70_ARATH", "mass": { "chemical_mass": 35234.0, "monoisotopic_mass": 35234.0 }, "refseq": { "ac": "NP_190390", "name": "RING/U-box superfamily protein", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_190390" }, "gene_names": [], "protein_names": [ { "name": "RING/U-box superfamily protein", "type": "synonym", "evidence": [ { "id": "NP_190390", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_190390" }, { "id": "Q9SU70", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SU70/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9SU70", "url": "https://www.uniprot.org/uniprotkb/Q9SU70" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9SU70", "locus": {} } ], "crossref": [ { "id": "AT3G48070", "url": "https://bar.utoronto.ca/thalemine/portal.do?externalids=AT3G48070", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "cd16618", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd16618", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "823962", "url": "https://www.ncbi.nlm.nih.gov/gene/823962", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR001841", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001841", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR013083", "url": "https://www.ebi.ac.uk/interpro/entry/IPR013083", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR039515", "url": "https://www.ebi.ac.uk/interpro/entry/IPR039515", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR039780", "url": "https://www.ebi.ac.uk/interpro/entry/IPR039780", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT3G48070", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G48070", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "NPPESCE", "url": "https://omabrowser.org/oma/group/NPPESCE/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR12603", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12603", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR12603:SF0", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12603:SF0", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF14570", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF14570", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_190390", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_190390", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT3G48070", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT3G48070", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "A0A1I9LPB8", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LPB8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A1I9LPB8-1", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LPB8-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F4JCT1", "url": "https://www.uniprot.org/uniprotkb/F4JCT1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F4JCT1-1", "url": "https://www.uniprot.org/uniprotkb/F4JCT1-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9SU70", "url": "https://www.uniprot.org/uniprotkb/Q9SU70", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9SU70-1", "url": "https://www.uniprot.org/uniprotkb/Q9SU70-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MISDSITNASATSAPTARDFGKKKRTNRSAKLKQSKLGLRREQWLSQVAMINKGDKEEMESNRRIGSEKPDQRDLPRPVENLDEDNNGTHRHESFIESLSNSPNSILSGMNSIPNFSSSSSSGSGGSCSGNITEEEDADDDGCLDDWEAIADALAADDEKHEKENPPESCQEHEDIKQSALIGGADVVLRDAKADSQRRKQKSNQAWRPDDKLRPQGLPNLEKQRSFPVMNLHFSSVTVVPSSCPICYEDLDLTDSNFLPCPCGFRLCLFCHKTICDGDGRCPGCRKPYERNTIKFEASVQGGGLTIRLARSSSMFCRS", "length": 319, "header": "tr|Q9SU70-1|Q9SU70_ARATH Isoform 1 of RING/U-box superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SU70-1" }, "isoforms": [ { "isoform_ac": "A0A1I9LPB8-1", "url": "https://www.uniprot.org/uniprotkb/A0A1I9LPB8/entry", "sequence": { "sequence": "MINKGDKEEMESNRRIGSEKPDQRDLPRPVENLDEDNNGTHRHESFIESLSNSPNSILSGMNSIPNFSSSSSSGSGGSCSGNITEEEDADDDGCLDDWEAIADALAADDEKHEKENPPESCQEHEDIKQSALIGGADVVLRDAKADSQRRKQKSNQAWRPDDKLRPQGLPNLEKQRSFPVMNLHFSSVTVVPSSCPICYEDLDLTDSNFLPCPCGFRLCLFCHKTICDGDGRCPGCRKPYERNTIKFEASVQGGGLTIRLARSSSMFCRVVCEYIRWYTNFKYIKVAISLFLIACENLAYL", "length": 301, "header": "tr|A0A1I9LPB8-1|A0A1I9LPB8_ARATH Computationally mapped isoform of RING/U-box superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SU70-1" }, "locus": { "chromosome": "3", "start_pos": 17750712, "end_pos": 17752761, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G48070.3", "url": "https://www.ensemblgenomes.org/id/AT3G48070.3" }, { "database": "Ensembl Peptide", "id": "AT3G48070.3", "url": "https://www.ensemblgenomes.org/id/AT3G48070.3" } ] } }, { "isoform_ac": "F4JCT1-1", "url": "https://www.uniprot.org/uniprotkb/F4JCT1/entry", "sequence": { "sequence": "MISDSITNASATSAPTARDFGKKKRTNRSAKLKQSKLGLRREQWLSQVAMINKGDKEEMESNRRIGSEKPDQRDLPRPVENLDEDNNGTHRHESFIESLSNSPNSILSGMNSIPNFSSSSSSGSGGSCSGNITEEEDADDDGCLDDWEAIADALAADDEKHEKENPPESCQEHEDIKQSALIGGADVVLRDAKADSQRRKQKSNQAWRPDDKLRPQGLPNLEKQRSFPVMNLHFSSVTVVPSSCPICYEDLDLTDSNFLPCPCGFRLCLFCHKTICDGDGRCPGCRKPYERNTIKFEASVQGGGLTIRLARSSSMFCRVVCEYIRWYTNFKYIKVAISLFLIACENLAYL", "length": 350, "header": "tr|F4JCT1-1|F4JCT1_ARATH Computationally mapped isoform of RING/U-box superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SU70-1" }, "locus": { "chromosome": "3", "start_pos": 17750712, "end_pos": 17752931, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G48070.2", "url": "https://www.ensemblgenomes.org/id/AT3G48070.2" }, { "database": "Ensembl Peptide", "id": "AT3G48070.2", "url": "https://www.ensemblgenomes.org/id/AT3G48070.2" } ] } }, { "isoform_ac": "Q9SU70-1", "url": "https://www.uniprot.org/uniprotkb/Q9SU70/entry", "sequence": { "sequence": "MISDSITNASATSAPTARDFGKKKRTNRSAKLKQSKLGLRREQWLSQVAMINKGDKEEMESNRRIGSEKPDQRDLPRPVENLDEDNNGTHRHESFIESLSNSPNSILSGMNSIPNFSSSSSSGSGGSCSGNITEEEDADDDGCLDDWEAIADALAADDEKHEKENPPESCQEHEDIKQSALIGGADVVLRDAKADSQRRKQKSNQAWRPDDKLRPQGLPNLEKQRSFPVMNLHFSSVTVVPSSCPICYEDLDLTDSNFLPCPCGFRLCLFCHKTICDGDGRCPGCRKPYERNTIKFEASVQGGGLTIRLARSSSMFCRS", "length": 319, "header": "tr|Q9SU70-1|Q9SU70_ARATH Isoform 1 of RING/U-box superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9SU70-1" }, "locus": { "chromosome": "3", "start_pos": 17750710, "end_pos": 17752965, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT3G48070.1", "url": "https://www.ensemblgenomes.org/id/AT3G48070.1" }, { "database": "Ensembl Peptide", "id": "AT3G48070.1", "url": "https://www.ensemblgenomes.org/id/AT3G48070.1" } ] } } ], "glycosylation": [], "phosphorylation": [ { "start_pos": 314, "end_pos": 314, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9SU70", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SU70" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ], "site_lbl": "Ser314" } ], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl\u00f6cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell L A, Mache R, Puigdom\u00e8nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu\u00e9tier F, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L\u00f6hnert T H, Nordsiek G, Reichelt J, Scharfe M, Sch\u00f6n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw\u00e4lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse A C, Alcaraz J P, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes H W, Mayer K F, Kaul S, Town C D, Koo H L, Tallon L J, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii C Y, Shea T P, Creasy T H, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill J E, Feldblyum T V, Preuss D, Lin X, Nierman W C, Salzberg S L, White O, Venter J C, Fraser C M, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,", "evidence": [ { "database": "UniProtKB", "id": "Q9SU70", "url": "https://www.uniprot.org/uniprotkb/Q9SU70" } ], "reference": [ { "type": "PubMed", "id": "11130713", "url": "https://glygen.org/publication/PubMed/11130713" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9SU70", "url": "https://www.uniprot.org/uniprotkb/Q9SU70" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] }, { "title": "Capturing the phosphorylation and protein interaction landscape of the plant TOR kinase.", "journal": "Nature plants", "date": "2019-03", "authors": "Van Leene Jelle, Han Chao, Gadeyne Astrid, Eeckhout Dominique, Matthijs Caroline, Cannoot Bernard, De Winne Nancy, Persiau Geert, Van De Slijke Eveline, Van de Cotte Brigitte, Stes Elisabeth, Van Bel Michiel, Storme Veronique, Impens Francis, Gevaert Kris, Vandepoele Klaas, De Smet Ive, De Jaeger Geert", "evidence": [ { "database": "iPTMnet", "id": "Q9SU70", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9SU70" } ], "reference": [ { "type": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ], "pathway": [ { "id": "ath:AT3G48070", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT3G48070", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "zinc ion binding", "id": "GO:0008270", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008270", "evidence": [ { "database": "UniProtKB", "id": "Q9SU70", "url": "https://www.uniprot.org/uniprotkb/Q9SU70" } ], "pmid": "" }, { "name": "ubiquitin-protein transferase activity", "id": "GO:0004842", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004842", "evidence": [ { "database": "UniProtKB", "id": "Q9SU70", "url": "https://www.uniprot.org/uniprotkb/Q9SU70" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "CCR4-NOT complex", "id": "GO:0030014", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030014", "evidence": [ { "database": "UniProtKB", "id": "Q9SU70", "url": 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"n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "Q9SU70", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SU70" }, { "id": "PS50089", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50089" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "RING-type", "eco_id": "ECO_0000259", "start_pos": 244, "end_pos": 286, "start_aa": "Cys", "end_aa": "Arg", "glycosite_overlap": [] } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [ 314 ], "sequon_annotation_sites": [ { "start_pos": 115, "end_pos": 117 }, { "start_pos": 131, "end_pos": 133 }, { "start_pos": 27, "end_pos": 29 }, { "start_pos": 87, "end_pos": 89 }, { "start_pos": 8, "end_pos": 10 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": 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"count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 } ], "sort_fields": [ "start_pos", "end_pos", "kinase_uniprot_canonical_ac", "kinase_gene_name", "residue", "comment", "site_lbl" ] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 3 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "Q9SIJ8-1", "uniprot_ac": "Q9SIJ8", "uniprot_id": "Q9SIJ8_ARATH", "mass": { "chemical_mass": 20588.0, "monoisotopic_mass": 20588.0 }, "refseq": { "ac": "NP_850015", "name": "Adenine nucleotide alpha hydrolases-like superfamily protein", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_850015" }, "gene_names": [ { "name": "RD2", "type": "recommended", "evidence": [ { "id": "Q9SIJ8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SIJ8" } ] }, { "name": "F2G1.11", "type": "synonym", "evidence": [ { "id": "NP_850015", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_850015" }, { "id": "Q9SIJ8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SIJ8" } ] }, { "name": "F2G1_11", "type": "synonym", "evidence": [ { "id": "NP_850015", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_850015" }, { "id": "Q9SIJ8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SIJ8" } ] }, { "name": "RD2", "type": "synonym", "evidence": [ { "id": "NP_850015", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_850015" } ] } ], "protein_names": [ { "name": "Adenine nucleotide alpha hydrolases-like superfamily protein", "type": "synonym", "evidence": [ { "id": "NP_850015", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_850015" }, { "id": "Q9SIJ8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9SIJ8/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9SIJ8", "url": "https://www.uniprot.org/uniprotkb/Q9SIJ8" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "RD2", "url": "https://www.uniprot.org/uniprotkb/Q9SIJ8", "locus": { "chromosome": "CP002685.1", "start_pos": 9250311, "end_pos": 9248525, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "AT2G21620", "url": "https://www.ensemblgenomes.org/id/AT2G21620" } ] } } ], "crossref": [ { "id": "cd23659", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd23659", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "816700", "url": "https://www.ncbi.nlm.nih.gov/gene/816700", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR006016", "url": "https://www.ebi.ac.uk/interpro/entry/IPR006016", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR014729", "url": "https://www.ebi.ac.uk/interpro/entry/IPR014729", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT2G21620", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT2G21620", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "Q9SIJ8", "url": "https://www.orthodb.org/?gene=Q9SIJ8", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR47583", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR47583", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR47583:SF1", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR47583:SF1", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00582", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00582", "database": "Pfam", 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PE=1 SV=2 CANONICAL=Q9SIJ8-1" }, "isoforms": [ { "isoform_ac": "Q9SIJ8-1", "url": "https://www.uniprot.org/uniprotkb/Q9SIJ8/entry", "sequence": { "sequence": "MEALPEDEEYSFREVVLPSLIPVVPEPELERESGERRRGRDVIVAVDHGPNSKHAFDWALVHFCRLADTLHLVHAVSSVKNDVVYETSQALMEKLAVEAYQVAMVKSVARVVEGDAGKVICKEAEKVKPAAVIVGTRGRSLVRSVLQGSVSEYCFHNCKSAPVIIVPGKEAGDESIVDWTRSEDPKP", "length": 187, "header": "tr|Q9SIJ8-1|Q9SIJ8_ARATH Isoform 1 of Adenine nucleotide alpha hydrolases-like superfamily protein OS=Arabidopsis thaliana OX=3702 GN=RD2 PE=1 SV=2 CANONICAL=Q9SIJ8-1" }, "locus": { "chromosome": "2", "start_pos": 9248525, "end_pos": 9250311, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT2G21620.1", "url": "https://www.ensemblgenomes.org/id/AT2G21620.1" }, { "database": "Ensembl Peptide", "id": "AT2G21620.1", "url": "https://www.ensemblgenomes.org/id/AT2G21620.1" } ] } } ], "glycosylation": [], "phosphorylation": [ { "start_pos": 11, "end_pos": 11, "kinase_uniprot_canonical_ac": "", 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Cell. Proteomics", "date": "2012", "authors": "Bienvenut WV, Sumpton D, Martinez A, Lilla S, Espagne C, Meinnel T, Giglione C", "evidence": [ { "database": "UniProtKB", "id": "Q9SIJ8", "url": "https://www.uniprot.org/uniprotkb/Q9SIJ8" } ], "reference": [ { "type": "PubMed", "id": "22223895", "url": "https://glygen.org/publication/PubMed/22223895" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9SIJ8", "url": "https://www.uniprot.org/uniprotkb/Q9SIJ8" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT2G21620", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT2G21620", "resource": "KEGG Pathway" } ], "orthologs": 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"MVGNSLASPLATLGSAKCFRHSAVDLVTYTNVLPLRLNSSYHGVNGGVRTSSYSRSKWIVFCSTTQVETSNEDPNIWEECKEALSCFDFSVEEKDKILGKAFGHIHSPYWTEERVKENPKVETLNQILEFLRSLGLSDEDLHKVMKKFPEVLGCSLEEEMKPNIGILENQWGITGKQLRNLLLRNPKVLGYNVDCKGDCVAQCTRCWVRF", "length": 210, "header": "tr|Q9SST2-1|Q9SST2_ARATH Isoform 1 of Mitochondrial transcription termination factor family protein OS=Arabidopsis thaliana OX=3702 GN=MTERF12 PE=1 SV=1 CANONICAL=Q9SST2-1" }, "locus": { "chromosome": "4", "start_pos": 6076805, "end_pos": 6079151, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT4G09620.2", "url": "https://www.ensemblgenomes.org/id/AT4G09620.2" }, { "database": "Ensembl Peptide", "id": "AT4G09620.2", "url": "https://www.ensemblgenomes.org/id/AT4G09620.2" } ] } } ], "glycosylation": [], "phosphorylation": [ { "start_pos": 137, "end_pos": 137, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "F4JK28", "url": 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G, Ramsperger U, Hilbert H, Braun M, Holzer E, Brandt A, Peters S, van Staveren M, Dirske W, Mooijman P, Klein Lankhorst R, Rose M, Hauf J, K\u00f6tter P, Berneiser S, Hempel S, Feldpausch M, Lamberth S, Van den Daele H, De Keyser A, Buysshaert C, Gielen J, Villarroel R, De Clercq R, Van Montagu M, Rogers J, Cronin A, Quail M, Bray-Allen S, Clark L, Doggett J, Hall S, Kay M, Lennard N, McLay K, Mayes R, Pettett A, Rajandream M A, Lyne M, Benes V, Rechmann S, Borkova D, Bl\u00f6cker H, Scharfe M, Grimm M, L\u00f6hnert T H, Dose S, de Haan M, Maarse A, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Fartmann B, Granderath K, Dauner D, Herzl A, Neumann S, Argiriou A, Vitale D, Liguori R, Piravandi E, Massenet O, Quigley F, Clabauld G, M\u00fcndlein A, Felber R, Schnabl S, Hiller R, Schmidt W, Lecharny A, Aubourg S, Chefdor F, Cooke R, Berger C, Montfort A, Casacuberta E, Gibbons T, Weber N, Vandenbol M, Bargues M, Terol J, Torres A, Perez-Perez A, Purnelle B, Bent E, Johnson S, Tacon D, Jesse T, Heijnen L, Schwarz S, Scholler P, Heber S, Francs P, Bielke C, Frishman D, Haase D, Lemcke K, Mewes H W, Stocker S, Zaccaria P, Bevan M, Wilson R K, de la Bastide M, Habermann K, Parnell L, Dedhia N, Gnoj L, Schutz K, Huang E, Spiegel L, Sehkon M, Murray J, Sheet P, Cordes M, Abu-Threideh J, Stoneking T, Kalicki J, Graves T, Harmon G, Edwards J, Latreille P, Courtney L, Cloud J, Abbott A, Scott K, Johnson D, Minx P, Bentley D, Fulton B, Miller N, Greco T, Kemp K, Kramer J, Fulton L, Mardis E, Dante M, Pepin K, Hillier L, Nelson J, Spieth J, Ryan E, Andrews S, Geisel C, Layman D, Du H, Ali J, Berghoff A, Jones K, Drone K, Cotton M, Joshu C, Antonoiu B, Zidanic M, Strong C, Sun H, Lamar B, Yordan C, Ma P, Zhong J, Preston R, Vil D, Shekher M, Matero A, Shah R, Swaby I K, O'Shaughnessy A, Rodriguez M, Hoffmann J, Till S, Granat S, Shohdy N, Hasegawa A, Hameed A, Lodhi M, Johnson A, Chen E, Marra M, Martienssen R, McCombie W R", "evidence": [ { "database": "UniProtKB", "id": "Q9SST2", "url": "https://www.uniprot.org/uniprotkb/Q9SST2" } ], "reference": [ { "type": "PubMed", "id": "10617198", "url": "https://glygen.org/publication/PubMed/10617198" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9SST2", "url": "https://www.uniprot.org/uniprotkb/Q9SST2" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT4G09620", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT4G09620", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "nucleic acid binding", "id": "GO:0003676", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003676", "evidence": [ { "database": "UniProtKB", "id": "Q9SST2", "url": "https://www.uniprot.org/uniprotkb/Q9SST2" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 2, "go_terms": [ { "name": "DNA-templated transcription termination", "id": "GO:0006353", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006353", "evidence": [ { "database": "UniProtKB", "id": "Q9SST2", "url": "https://www.uniprot.org/uniprotkb/Q9SST2" } ], "pmid": "" }, { "name": "chloroplast organization", "id": "GO:0009658", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009658", "evidence": [ { "database": "UniProtKB", "id": "Q9SST2", "url": "https://www.uniprot.org/uniprotkb/Q9SST2" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 3, "go_terms": [ { "name": "chloroplast", "id": "GO:0009507", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009507", "evidence": [ { "database": "UniProtKB", "id": "Q9SST2", "url": "https://www.uniprot.org/uniprotkb/Q9SST2" } ], "pmid": "" }, { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "Q9SST2", "url": "https://www.uniprot.org/uniprotkb/Q9SST2" } ], "pmid": "" }, { "name": "plastid nucleoid", "id": "GO:0042646", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042646", "evidence": [ { "database": "UniProtKB", "id": "Q9SST2", "url": "https://www.uniprot.org/uniprotkb/Q9SST2" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 38, "end_pos": 40, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [ 137 ], "sequon_annotation_sites": [ { "start_pos": 38, "end_pos": 40 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 } ], "sort_fields": [ "start_pos", "end_pos", "kinase_uniprot_canonical_ac", "kinase_gene_name", "residue", "comment", "site_lbl" ] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "Q9ZVK7-1", "uniprot_ac": "Q9ZVK7", "uniprot_id": "Q9ZVK7_ARATH", "mass": { "chemical_mass": 70925.0, "monoisotopic_mass": 70925.0 }, "refseq": { "ac": "NP_001189526", "name": "myosin heavy chain-like protein", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001189526" }, "gene_names": [ { "name": "MEE13", "type": "recommended", "evidence": [ { "id": "Q9ZVK7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9ZVK7" } ] }, { "name": "MEE13", "type": "synonym", "evidence": [ { "id": "NP_001189526", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001189526" } ] }, { "name": "T6B13.8", "type": "synonym", "evidence": [ { "id": "NP_001189526", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001189526" }, { "id": "Q9ZVK7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9ZVK7" } ] }, { "name": "T6B13_8", "type": "synonym", "evidence": [ { "id": "NP_001189526", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001189526" }, { "id": "Q9ZVK7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9ZVK7" } ] }, { "name": "maternal effect embryo arrest 13", "type": "synonym", "evidence": [ { "id": "NP_001189526", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001189526" } ] } ], "protein_names": [ { "name": "Myosin heavy chain-like protein", "type": "synonym", "evidence": [ { "id": "Q9ZVK7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9ZVK7/entry#names_and_taxonomy" } ] }, { "name": "myosin heavy chain-like protein", "type": "synonym", "evidence": [ { "id": "NP_001189526", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001189526" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9ZVK7", "url": "https://www.uniprot.org/uniprotkb/Q9ZVK7" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "MEE13", "url": "https://www.uniprot.org/uniprotkb/Q9ZVK7", "locus": { "chromosome": "CP002685.1", "start_pos": 6283940, "end_pos": 6277802, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "AT2G14680", "url": "https://www.ensemblgenomes.org/id/AT2G14680" } ] } } ], "crossref": [ { "id": "AT2G14680", "url": "https://bar.utoronto.ca/thalemine/portal.do?externalids=AT2G14680", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "815956", "url": "https://www.ncbi.nlm.nih.gov/gene/815956", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "ath:AT2G14680", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT2G14680", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "QNNLRMG", "url": "https://omabrowser.org/oma/group/QNNLRMG/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR35712", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR35712", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR35712:SF1", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR35712:SF1", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "NP_001189526", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001189526", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT2G14680", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT2G14680", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "A0A1P8B0T6", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B0T6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A1P8B0T6-1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B0T6-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A1P8B0V1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B0V1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A1P8B0V1-1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B0V1-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A1P8B0X7", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B0X7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A1P8B0X7-1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B0X7-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A1P8B0Y2", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B0Y2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A1P8B0Y2-1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B0Y2-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F4IGF6", "url": "https://www.uniprot.org/uniprotkb/F4IGF6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F4IGF6-1", "url": "https://www.uniprot.org/uniprotkb/F4IGF6-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9ZVK7", "url": "https://www.uniprot.org/uniprotkb/Q9ZVK7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9ZVK7-1", "url": "https://www.uniprot.org/uniprotkb/Q9ZVK7-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MDLNLDENENLKARIKQLEHERNELQKDIEQLCMQQGGPSILGVAARMHFQRTASLEQEIESLKLKLAACTREKHNLQEELAEAYRVKAQLADLHAGEVAKNLEAEKQVRFFQGSVAAAFSERDKSVMEAEKAEENAEMMSQKLSEIEMRLEELSSDCLVQKRLNDTLQADLAKLEEQTRTYAGVIEKFYDIRKASLCESLEMSLHEKCASLLDDPIESWTFNDPSTSDYVAALEGELGKVKNTVDNLQSKLRVGLEIENHLKKRVRALEKKNIVADGLIVNGITDIRHHHSQLRAYIIALLNEEGLYIKSISKNVEEKLKLHSSEVQNVVPPQHDLKPDESECRDVHMTTVVESCQVTKLAEASIAKIMAESRGDASEAFAQALQEKVGALLLLSQQEERHLHEENVNAALQQKVDELQRNILQVTNEKVRTLMELAQLRQEYQSLRDKMSGTREEESTGNSGRIVISNEKDGRLKNMWKKSYINRWIDPSSRGGSHLNTEADYASNIEYSRMKVEYAAIKENLESMGHLTTSIRRLRLALLKVKELNDTETTARSCEVAIANILVEATHLKTALGISIPISWSAESDIESVTDGESSCERTDSVSAAGFEMVELVILAAEIMKEQHH", "length": 629, "header": "tr|Q9ZVK7-1|Q9ZVK7_ARATH Isoform 1 of Myosin heavy chain-like protein OS=Arabidopsis thaliana OX=3702 GN=MEE13 PE=1 SV=1 CANONICAL=Q9ZVK7-1" }, "isoforms": [ { "isoform_ac": "A0A1P8B0T6-1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B0T6/entry", "sequence": { "sequence": "MDLNLDENENLKARIKQLEHERNELQKDIEQLCMQQGGPSILGVAARMHFQRTASLEQEIESLKLKLAACTREKHNLQEELAEAYRVKAQLADLHAGEVAKNLEAEKQVRFFQGSVAAAFSERDKSVMEAEKAEENAEMMSQKLSEIEMRLEELSSDCLVQKRLNDTLQADLAKLEEQTRTYAGVIEKFYDIRKASLCESLEMSLHEKCASLLDDPIESWTFNDPSTSDYVAALEGELGKVKNTVDNLQSKLRVGLEIENHLKKRVRALEKKNIVADGLIVNGITDIRHHHSQLRAYIIALLNEEGLYIKSISKNVEEKLKLHSSEVQNVVPPQHDLKPDESECRDVHMTTVVESCQVTKLAEASIAKIMAESRGDASEAFAQALQEKVGALLLLSQQEERHLHEENVNAALQQKVDELQRNILQVTNEKVRTLMELAQLRQEYQSLRDQGFAL", "length": 454, "header": "tr|A0A1P8B0T6-1|A0A1P8B0T6_ARATH Computationally mapped isoform of Myosin heavy chain-like protein OS=Arabidopsis thaliana OX=3702 GN=MEE13 PE=1 SV=1 CANONICAL=Q9ZVK7-1" }, "locus": { "chromosome": "2", "start_pos": 6277961, "end_pos": 6282940, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT2G14680.6", "url": "https://www.ensemblgenomes.org/id/AT2G14680.6" }, { "database": "Ensembl Peptide", "id": "AT2G14680.6", "url": "https://www.ensemblgenomes.org/id/AT2G14680.6" } ] } }, { "isoform_ac": "A0A1P8B0V1-1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B0V1/entry", "sequence": { "sequence": "MDLNLDENENLKARIKQLEHERNELQKDIEQLCMQQGGPSILGVAARMHFQRTASLEQEIESLKLKLAACTREKHNLQEELAEAYRVKAQLADLHAGEVAKNLEAEKQVRFFQGSVAAAFSERDKSVMEAEKAEENAEMMSQKLSEIEMRLEELSSDCLVQKRLNDTLQADLAKLEEQTRTYAGVIEKFYDIRKASLCESLEMSLHEKCASLLDDPIESWTFNDPSTSDYVAALEGELGKVKNTVDNLQSKLRVGLEIENHLKKRVRALEKKNIVADGLIVNGITDIRHHHSQLRAYIIALLNEEGLYIKSISKNVEEKLKLHSSEVQNVVPPQHDLKPDESECRDVHMTTVVESCQVTKLAEASIAKIMAESRGDASEAFAQALQEKVGALLLLSQQEERHLHEENVNAALQQKVDELQRNILQVTNEKVRTLMELAQLRQEYQSLREHGTFCKWCKPSFKTNFALSSVLNKMSGTREEESTGNSGRIVISNEKDGRLKNMWKKSYINRWIDPSSRGGSHLNTEADYASNIEYSRFGILHLHCLIVLGSFCDKSLLFWQNESRICSYKREPGKHGALDDFNPQAPSSALEGKGIK", "length": 596, "header": "tr|A0A1P8B0V1-1|A0A1P8B0V1_ARATH Computationally mapped isoform of Myosin heavy chain-like protein OS=Arabidopsis thaliana OX=3702 GN=MEE13 PE=1 SV=1 CANONICAL=Q9ZVK7-1" }, "locus": { "chromosome": "2", "start_pos": 6277802, "end_pos": 6283525, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT2G14680.4", "url": "https://www.ensemblgenomes.org/id/AT2G14680.4" }, { "database": "Ensembl Peptide", "id": "AT2G14680.4", "url": "https://www.ensemblgenomes.org/id/AT2G14680.4" } ] } }, { "isoform_ac": "A0A1P8B0X7-1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B0X7/entry", "sequence": { "sequence": "MDLNLDENENLKARIKQLEHERNELQKDIEQLCMQQGGPSILGVAARMHFQRTASLEQEIESLKLKLAACTREKHNLQEELAEAYRVKAQLADLHAGEVAKNLEAEKQVRFFQGSVAAAFSERDKSVMEAEKAEENAEMMSQKLSEIEMRLEELSSDCLVQKRLNDTLQADLAKLEEQTRTYAGVIEKFYDIRKASLCESLEMSLHEKCASLLDDPIESWTFNDPSTSDYVAALEGELGKVKNTVDNLQSKLRVGLEIENHLKKRVRALEKKNIVADGLIVNGITDIRHHHSQLRAYIIALLNEEGLYIKSISKNVEEKLKLHSSEVQNVVPPQHDLKPDESECRDVHMTTVVESCQVTKLAEASIAKIMAESRGDASEAFAQALQEKVGALLLLSQQEERHLHEENVNAALQQKVDELQRNILQVTNEKVRTLMELAQLRQEYQSLRDKMSGTREEESTGNSGRIVISNEKDGRLKNMWKKSYINRWIDPSSRGGSHLNTEADYASNIEYSRFGILHLHCLIVLGSFCDKSLLFWQNESRICSYKREPGKHGALDDFNPQAPSSALEGKGIK", "length": 573, "header": "tr|A0A1P8B0X7-1|Q9ZVK7_ARATH Computationally mapped isoform of Myosin heavy chain-like protein OS=Arabidopsis thaliana OX=3702 GN=MEE13 PE=1 SV=1 CANONICAL=Q9ZVK7-1" }, "locus": { "chromosome": "2", "start_pos": 6277802, "end_pos": 6283525, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT2G14680.5", "url": "https://www.ensemblgenomes.org/id/AT2G14680.5" }, { "database": "Ensembl Peptide", "id": "AT2G14680.5", "url": "https://www.ensemblgenomes.org/id/AT2G14680.5" } ] } }, { "isoform_ac": "A0A1P8B0Y2-1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B0Y2/entry", "sequence": { "sequence": "MMSQKLSEIEMRLEELSSDCLVQKRLNDTLQADLAKLEEQTRTYAGVIEKFYDIRKASLCESLEMSLHEKCASLLDDPIESWTFNDPSTSDYVAALEGELGKVKNTVDNLQSKLRVGLEIENHLKKRVRALEKKNIVADGLIVNGITDIRHHHSQLRAYIIALLNEEGLYIKSISKNVEEKLKLHSSEVQNVVPPQHDLKPDESECRDVHMTTVVESCQVTKLAEASIAKIMAESRGDASEAFAQALQEKVGALLLLSQQEERHLHEENVNAALQQKVDELQRNILQVTNEKVRTLMELAQLRQEYQSLRDKMSGTREEESTGNSGRIVISNEKDGRLKNMWKKSYINRWIDPSSRGGSHLNTEADYASNIEYSRMKVEYAAIKENLESMGHLTTSIRRLRLALLKVKELNDTETTARSCEVAIANILVEATHLKTALGISIPISWSAESDIESVTDGESSCERTDSVSAAGFEMVELVILAAEIMKEQHH", "length": 491, "header": "tr|A0A1P8B0Y2-1|Q9ZVK7_ARATH Computationally mapped isoform of Myosin heavy chain-like protein OS=Arabidopsis thaliana OX=3702 GN=MEE13 PE=1 SV=1 CANONICAL=Q9ZVK7-1" }, "locus": { "chromosome": "2", "start_pos": 6279534, "end_pos": 6283766, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT2G14680.8", "url": "https://www.ensemblgenomes.org/id/AT2G14680.8" }, { "database": "Ensembl Peptide", "id": "AT2G14680.8", "url": "https://www.ensemblgenomes.org/id/AT2G14680.8" } ] } }, { "isoform_ac": "F4IGF6-1", "url": "https://www.uniprot.org/uniprotkb/F4IGF6/entry", "sequence": { "sequence": "MDLNLDENENLKARIKQLEHERNELQKDIEQLCMQQGGPSILGVAARMHFQRTASLEQEIESLKLKLAACTREKHNLQEELAEAYRVKAQLADLHAGEVAKNLEAEKQVRFFQGSVAAAFSERDKSVMEAEKAEENAEMMSQKLSEIEMRLEELSSDCLVQKRLNDTLQADLAKLEEQTRTYAGVIEKFYDIRKASLCESLEMSLHEKCASLLDDPIESWTFNDPSTSDYVAALEGELGKVKNTVDNLQSKLRVGLEIENHLKKRVRALEKKNIVADGLIVNGITDIRHHHSQLRAYIIALLNEEGLYIKSISKNVEEKLKLHSSEVQNVVPPQHDLKPDESECRDVHMTTVVESCQVTKLAEASIAKIMAESRGDASEAFAQALQEKVGALLLLSQQEERHLHEENVNAALQQKVDELQRNILQVTNEKVRTLMELAQLRQEYQSLREHGTFCKWCKPSFKTNFALSSVLNKMSGTREEESTGNSGRIVISNEKDGRLKNMWKKSYINRWIDPSSRGGSHLNTEADYASNIEYSRMKVEYAAIKENLESMGHLTTSIRRLRLALLKVKELNDTETTARSCEVAIANILVEATHLKTALGISIPISWSAESDIESVTDGESSCERTDSVSAAGFEMVELVILAAEIMKEQHH", "length": 652, "header": "tr|F4IGF6-1|F4IGF6_ARATH Computationally mapped isoform of Myosin heavy chain-like protein OS=Arabidopsis thaliana OX=3702 GN=MEE13 PE=1 SV=1 CANONICAL=Q9ZVK7-1" }, "locus": { "chromosome": "2", "start_pos": 6277802, "end_pos": 6283940, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT2G14680.2", "url": "https://www.ensemblgenomes.org/id/AT2G14680.2" }, { "database": "Ensembl Peptide", "id": "AT2G14680.2", "url": "https://www.ensemblgenomes.org/id/AT2G14680.2" } ] } }, { "isoform_ac": "Q9ZVK7-1", "url": "https://www.uniprot.org/uniprotkb/Q9ZVK7/entry", "sequence": { "sequence": "MDLNLDENENLKARIKQLEHERNELQKDIEQLCMQQGGPSILGVAARMHFQRTASLEQEIESLKLKLAACTREKHNLQEELAEAYRVKAQLADLHAGEVAKNLEAEKQVRFFQGSVAAAFSERDKSVMEAEKAEENAEMMSQKLSEIEMRLEELSSDCLVQKRLNDTLQADLAKLEEQTRTYAGVIEKFYDIRKASLCESLEMSLHEKCASLLDDPIESWTFNDPSTSDYVAALEGELGKVKNTVDNLQSKLRVGLEIENHLKKRVRALEKKNIVADGLIVNGITDIRHHHSQLRAYIIALLNEEGLYIKSISKNVEEKLKLHSSEVQNVVPPQHDLKPDESECRDVHMTTVVESCQVTKLAEASIAKIMAESRGDASEAFAQALQEKVGALLLLSQQEERHLHEENVNAALQQKVDELQRNILQVTNEKVRTLMELAQLRQEYQSLRDKMSGTREEESTGNSGRIVISNEKDGRLKNMWKKSYINRWIDPSSRGGSHLNTEADYASNIEYSRMKVEYAAIKENLESMGHLTTSIRRLRLALLKVKELNDTETTARSCEVAIANILVEATHLKTALGISIPISWSAESDIESVTDGESSCERTDSVSAAGFEMVELVILAAEIMKEQHH", "length": 629, "header": "tr|Q9ZVK7-1|Q9ZVK7_ARATH Isoform 1 of Myosin heavy chain-like protein OS=Arabidopsis thaliana OX=3702 GN=MEE13 PE=1 SV=1 CANONICAL=Q9ZVK7-1" }, "locus": { "chromosome": "2", "start_pos": 6277961, "end_pos": 6283940, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT2G14680.1", "url": "https://www.ensemblgenomes.org/id/AT2G14680.1" }, { "database": "Ensembl Peptide", "id": "AT2G14680.1", "url": "https://www.ensemblgenomes.org/id/AT2G14680.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "1999", "authors": "Lin X, Kaul S, Rounsley S, Shea T P, Benito M I, Town C D, Fujii C Y, Mason T, Bowman C L, Barnstead M, Feldblyum T V, Buell C R, Ketchum K A, Lee J, Ronning C M, Koo H L, Moffat K S, Cronin L A, Shen M, Pai G, Van Aken S, Umayam L, Tallon L J, Gill J E, Adams M D, Carrera A J, Creasy T H, Goodman H M, Somerville C R, Copenhaver G P, Preuss D, Nierman W C, White O, Eisen J A, Salzberg S L, Fraser C M, Venter J C", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8B0X7", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B0X7" } ], "reference": [ { "type": "PubMed", "id": "10617197", "url": "https://glygen.org/publication/PubMed/10617197" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8B0X7", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B0X7" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT2G14680", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT2G14680", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q9ZVK7", "url": "https://www.uniprot.org/uniprotkb/Q9ZVK7" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "Q9ZVK7", "url": "https://www.uniprot.org/uniprotkb/Q9ZVK7" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "embryo development ending in seed dormancy", "id": "GO:0009793", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009793", "evidence": [ { "database": "UniProtKB", "id": "Q9ZVK7", "url": "https://www.uniprot.org/uniprotkb/Q9ZVK7" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 165, "end_pos": 167, "annotation": "n_glycosylation_sequon" }, { "start_pos": 549, "end_pos": 551, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 165, "end_pos": 167 }, { "start_pos": 549, "end_pos": 551 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": 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"count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "Q9ZU86-1", "uniprot_ac": "Q9ZU86", "uniprot_id": "Q9ZU86_ARATH", "mass": { "chemical_mass": 49197.0, "monoisotopic_mass": 49197.0 }, "refseq": {}, "gene_names": [ { "name": "T9J23.18", "type": "synonym", "evidence": [ { "id": "Q9ZU86", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9ZU86" } ] } ], "protein_names": [ { "name": "DNAse I-like superfamily protein", "type": "synonym", "evidence": [ { "id": "Q9ZU86", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9ZU86/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9ZU86", "url": "https://www.uniprot.org/uniprotkb/Q9ZU86" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9ZU86", "locus": {} } ], "crossref": [ { "id": "AT2G48030", "url": "https://bar.utoronto.ca/thalemine/portal.do?externalids=AT2G48030", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "819415", "url": "https://www.ncbi.nlm.nih.gov/gene/819415", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR005135", "url": "https://www.ebi.ac.uk/interpro/entry/IPR005135", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036691", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036691", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR051916", "url": "https://www.ebi.ac.uk/interpro/entry/IPR051916", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT2G48030", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT2G48030", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "SWRTHYY", "url": "https://omabrowser.org/oma/group/SWRTHYY/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A1P8B282", "url": "https://www.orthodb.org/?gene=A0A1P8B282", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "Q9ZU86", "url": "https://www.orthodb.org/?gene=Q9ZU86", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR14859", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR14859", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR14859:SF0", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR14859:SF0", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF03372", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF03372", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "AT2G48030", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT2G48030", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "A0A1P8B282", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B282", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A1P8B282-1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B282-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9ZU86", "url": "https://www.uniprot.org/uniprotkb/Q9ZU86", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9ZU86-1", "url": "https://www.uniprot.org/uniprotkb/Q9ZU86-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MLNLIAFLRRRLRRPRKARISVNHHHLSVDSSPETHHHQNGFSSAAAIHPNPDKTITVATFNAAMFSMAPAVPSNKGLPFRSKSTVDRPKSILKPMNAAASPTHDSRKQQRFAKSRPRRVSINLPDNEISRQLSFREDPQHSPLRPGEIGLRSTRTALEVLSELDADVLALQDVKADEADQMRPLSDLAAALGMNYVFAESWAPEYGNAILSKWPIKSSNVLRIFDHTDFRNVLKASIEVPGSGEVEFHCTHLDHLDEKWRMKQVDAIIQSTNVPHILAGALNSLDESDYSPERWTDIVKYYEEMGKPIPKAQVMRFLKSKEYTDAKDFAGECESVVVVAKGQSVQGTCKYGTRVDYILASSDSPYRFVPGSYSVLSSKGTSDHHIVKVDVVKATSINVNEQEQRPIRSHKLQRITATTYNNNSSLTKASWRTHYYKA", "length": 438, "header": "tr|Q9ZU86-1|Q9ZU86_ARATH Isoform 1 of DNAse I-like superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9ZU86-1" }, "isoforms": [ { "isoform_ac": "A0A1P8B282-1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B282/entry", "sequence": { "sequence": "MLNLIAFLRRRLRRPRKARISVNHHHLSVDSSPETHHHQNGFSSAAAIHPNPDKTITVATFNAAMFSMAPAVPSNKGLPFRSKSTVDRPKSILKPMNAAASPTHDSRKQQRFAKSRPRRVSINLPDNEISRQLSFREDPQHSPLRPGEIGLRSTRTALEVLSELDADVLALQDVKADEADQMRPLSDLAAALGMNYVFAESWAPEYGNAILSKWPIKSSNVLRIFDHTDFRNVLKASIEVPGSGEVEFHCTHLDHLDEKWRMKQVDAIIQSTNVPHILAGALNSLDESDYSPERWTDIVKVHYPNKLMHIYIYIYTSYQSI", "length": 321, "header": "tr|A0A1P8B282-1|Q9ZU86_ARATH Computationally mapped isoform of DNAse I-like superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9ZU86-1" }, "locus": { "chromosome": "2", "start_pos": 19647523, "end_pos": 19650313, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT2G48030.2", "url": "https://www.ensemblgenomes.org/id/AT2G48030.2" }, { "database": "Ensembl Peptide", "id": "AT2G48030.2", "url": "https://www.ensemblgenomes.org/id/AT2G48030.2" } ] } }, { "isoform_ac": "Q9ZU86-1", "url": "https://www.uniprot.org/uniprotkb/Q9ZU86/entry", "sequence": { "sequence": "MLNLIAFLRRRLRRPRKARISVNHHHLSVDSSPETHHHQNGFSSAAAIHPNPDKTITVATFNAAMFSMAPAVPSNKGLPFRSKSTVDRPKSILKPMNAAASPTHDSRKQQRFAKSRPRRVSINLPDNEISRQLSFREDPQHSPLRPGEIGLRSTRTALEVLSELDADVLALQDVKADEADQMRPLSDLAAALGMNYVFAESWAPEYGNAILSKWPIKSSNVLRIFDHTDFRNVLKASIEVPGSGEVEFHCTHLDHLDEKWRMKQVDAIIQSTNVPHILAGALNSLDESDYSPERWTDIVKYYEEMGKPIPKAQVMRFLKSKEYTDAKDFAGECESVVVVAKGQSVQGTCKYGTRVDYILASSDSPYRFVPGSYSVLSSKGTSDHHIVKVDVVKATSINVNEQEQRPIRSHKLQRITATTYNNNSSLTKASWRTHYYKA", "length": 438, "header": "tr|Q9ZU86-1|Q9ZU86_ARATH Isoform 1 of DNAse I-like superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9ZU86-1" }, "locus": { "chromosome": "2", "start_pos": 19647523, "end_pos": 19650287, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT2G48030.1", "url": "https://www.ensemblgenomes.org/id/AT2G48030.1" }, { "database": "Ensembl Peptide", "id": "AT2G48030.1", "url": "https://www.ensemblgenomes.org/id/AT2G48030.1" } ] } } ], "glycosylation": [], "phosphorylation": [ { 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"Protein", "Organism-specific" ] }, { "id": "cd00371", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd00371", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "818143", "url": "https://www.ncbi.nlm.nih.gov/gene/818143", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR006121", "url": "https://www.ebi.ac.uk/interpro/entry/IPR006121", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR017969", "url": "https://www.ebi.ac.uk/interpro/entry/IPR017969", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036163", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036163", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT2G35730", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT2G35730", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "TNCINKH", "url": "https://omabrowser.org/oma/group/TNCINKH/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PF00403", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00403", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "AT2G35730", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT2G35730", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "A0A1P8B334", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B334", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A1P8B334-1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B334-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9ZQP5", "url": "https://www.uniprot.org/uniprotkb/Q9ZQP5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9ZQP5-1", "url": "https://www.uniprot.org/uniprotkb/Q9ZQP5-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MKEPMMRRRTLMLCEKLSLPSFQVIEINADVGCVACQDRVSKIVSKMTGIEEYVVDLKKKLVMARGDFRPRLVSSQQQVKDVVSQTPSQNAKRLLRPLKIFLRSIFSLCLRPTTL", "length": 115, "header": "tr|Q9ZQP5-1|Q9ZQP5_ARATH Isoform 1 of Heavy metal transport/detoxification superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=2 CANONICAL=Q9ZQP5-1" }, "isoforms": [ { "isoform_ac": "A0A1P8B334-1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B334/entry", "sequence": { "sequence": "MLSKILTLGGQKQFQVIEINADVGCVACQDRVSKIVSKMTGIEEYVVDLKKKLVMARGDFRPRLVSSQQQVKDVVSQTPSQNAKRLLRPLKIFLRSIFSLCLRPTTL", "length": 107, "header": "tr|A0A1P8B334-1|Q9ZQP5_ARATH Computationally mapped isoform of Heavy metal transport/detoxification superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9ZQP5-1" }, "locus": { "chromosome": "2", "start_pos": 15020444, "end_pos": 15021598, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT2G35730.2", "url": "https://www.ensemblgenomes.org/id/AT2G35730.2" }, { "database": "Ensembl Peptide", "id": "AT2G35730.2", "url": "https://www.ensemblgenomes.org/id/AT2G35730.2" } ] } }, { "isoform_ac": "Q9ZQP5-1", "url": "https://www.uniprot.org/uniprotkb/Q9ZQP5/entry", "sequence": { "sequence": "MKEPMMRRRTLMLCEKLSLPSFQVIEINADVGCVACQDRVSKIVSKMTGIEEYVVDLKKKLVMARGDFRPRLVSSQQQVKDVVSQTPSQNAKRLLRPLKIFLRSIFSLCLRPTTL", "length": 115, "header": "tr|Q9ZQP5-1|Q9ZQP5_ARATH Isoform 1 of Heavy metal transport/detoxification superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=2 CANONICAL=Q9ZQP5-1" }, "locus": { "chromosome": "2", "start_pos": 15020398, "end_pos": 15021596, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT2G35730.1", "url": "https://www.ensemblgenomes.org/id/AT2G35730.1" }, { "database": "Ensembl Peptide", "id": "AT2G35730.1", "url": "https://www.ensemblgenomes.org/id/AT2G35730.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "1999", "authors": "Lin X, Kaul S, Rounsley S, Shea T P, Benito M I, Town C D, Fujii C Y, Mason T, Bowman C L, Barnstead M, Feldblyum T V, Buell C R, Ketchum K A, Lee J, Ronning C M, Koo H L, Moffat K S, Cronin L A, Shen M, Pai G, Van Aken S, Umayam L, Tallon L J, Gill J E, Adams M D, Carrera A J, Creasy T H, Goodman H M, Somerville C R, Copenhaver G P, Preuss D, Nierman W C, White O, Eisen J A, Salzberg S L, Fraser C M, Venter J C", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8B334", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B334" } ], "reference": [ { "type": "PubMed", "id": "10617197", "url": "https://glygen.org/publication/PubMed/10617197" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "A0A1P8B334", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B334" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT2G35730", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT2G35730", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "metal ion binding", "id": "GO:0046872", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046872", "evidence": [ { "database": "UniProtKB", "id": "Q9ZQP5", "url": "https://www.uniprot.org/uniprotkb/Q9ZQP5" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "Q9ZQP5", "url": "https://www.uniprot.org/uniprotkb/Q9ZQP5" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "Q9ZQP5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9ZQP5" }, { "id": "PS50846", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50846" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "HMA", "eco_id": "ECO_0000259", "start_pos": 22, "end_pos": 91, "start_aa": "Phe", "end_aa": "Ala", "glycosite_overlap": [] } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], 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"table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "Q9ZT73-1", "uniprot_ac": "Q9ZT73", "uniprot_id": "Q9ZT73_ARATH", "mass": { "chemical_mass": 70467.0, "monoisotopic_mass": 70467.0 }, "refseq": {}, "gene_names": [ { "name": "F9H3.7", "type": "synonym", "evidence": [ { "id": "Q9ZT73", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9ZT73" } ] }, { "name": "F9H3_7", "type": "synonym", "evidence": [ { "id": "Q9ZT73", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9ZT73" } ] } ], "protein_names": [ { "name": "Ankyrin repeat family protein", "type": "synonym", "evidence": [ { "id": "Q9ZT73", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9ZT73/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9ZT73", "url": "https://www.uniprot.org/uniprotkb/Q9ZT73" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9ZT73", "locus": {} } ], "crossref": [ { "id": "AT4G03450", "url": "https://bar.utoronto.ca/thalemine/portal.do?externalids=AT4G03450", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "827913", "url": "https://www.ncbi.nlm.nih.gov/gene/827913", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR002110", "url": "https://www.ebi.ac.uk/interpro/entry/IPR002110", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR026961", "url": "https://www.ebi.ac.uk/interpro/entry/IPR026961", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036770", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036770", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT4G03450", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT4G03450", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "ELEWPIN", "url": "https://omabrowser.org/oma/group/ELEWPIN/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR24186", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24186", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR24186:SF46", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24186:SF46", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF12796", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF12796", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF13962", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF13962", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "AT4G03450", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT4G03450", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "A0A1P8B382", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B382", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A1P8B382-1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B382-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9ZT73", "url": "https://www.uniprot.org/uniprotkb/Q9ZT73", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9ZT73-1", "url": "https://www.uniprot.org/uniprotkb/Q9ZT73-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MTRAFHLIIDCITGDTGSIQMLVTNLYDLPGEYVSMNPEIFSAMRAGNVKFLDKMKTNNNTPLACFRNETGDFTLHLAAAWGRLELVKRIVSECPCLLLETNSKDQIPLHAAAAAGRLAVVEAFVARVNEISDGLSEEERERVNLYAMKDIDGNTALHLALKGGHLKTAACLVKANHLASFLANNHGVSPLFTAIIAGSLTLVEAMMYVPGQTCNLASKLEGRKSLVHAALKAKNSDILDVILSEDPSLVNERDEEGRTCLSVAAYVGYYKGVVNLLHRSTSNVFECDDDGSYPIHMAVEKGRVKIFLKLLKCCPDSQYLLNKQGQNILHIAAKSGKTGTYLLQVIKAYDLIKNDLIMEQDVDGNTPLHLATLTWRPRTVNILNKFTLGNHLHIRNKDGLSALDIAESNLQSNYVFRERMTLMVLLCTCSPRGFKMIPTSGITLKSRSEKVAGNKYKDSINVLLLVATLVATVAFAAGIAIPGGFSSSTPKRGIAILDDDDFLSIFLVFNTLAMQSSVLAIVALIWAQLGDPVLVHKTFHLALPALFVSLVSMSSAFFCGVVATTKHNPWLFDSIIFISIIFLFVVAYLLAPYAIPQFPGTPFLQRITKCYLDFMLLFVNEDDVDIVCEKKQETVHLYVAN", "length": 641, "header": "tr|Q9ZT73-1|Q9ZT73_ARATH Isoform 1 of Ankyrin repeat family protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9ZT73-1" }, "isoforms": [ { "isoform_ac": "A0A1P8B382-1", "url": "https://www.uniprot.org/uniprotkb/A0A1P8B382/entry", "sequence": { "sequence": "MTRAFHLIIDCITGDTGSIQMLVTNLYDLPGEYVSMNPEIFSAMRAGNVKFLDKMKTNNNTPLACFRNETGDFTLHLAAAWGRLELVKRIVSECPCLLLETNSKDQIPLHAAAAAGRLAVVEAFVARVNEISDGLSEEERERVNLYAMKDIDGNTALHLALKGGHLKTAACLVKANHLASFLANNHGVSPLFTAIIAGSLTLVEAMMYVPGQTCNLASKLEGRKSLVHAALKAKNSDILDVILSEDPSLVNERDEEGRTCLSVAAYVGYYKGVVNLLHRSTSNVFECDDDGSYPIHMAVEKGRVKIFLKLLKCCPDSQYLLNKQGQNILHIAAKSGKTGTYLLQVIKAYDLIKNDLIMEQDVDGNTPLHLATLTWRPRTVNILNKFTLGNHLHIRNKDGLSALDIAESNLQSNYVFRERMTLMVLLCTCSPRGFKMIPTSGITLKSRSEKVAGNKYKDSINVLLLVATLVATVAFAAGIAIPGGFSSSTPKRGIAILDDDDFLSIFLVFNTLAMQSSVLAIVALIWAQLGDPVLVHKTFHLALPALFVSLVSMSSAFFCGVVATTKHNPWLFDSIIFISIIFLFVMMLILSARRSRRPSIFMSRTKSKGKIS", "length": 612, "header": "tr|A0A1P8B382-1|Q9ZT73_ARATH Computationally mapped isoform of Ankyrin repeat family protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9ZT73-1" }, "locus": { "chromosome": "4", "start_pos": 1529385, "end_pos": 1531780, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT4G03450.2", "url": "https://www.ensemblgenomes.org/id/AT4G03450.2" }, { "database": "Ensembl Peptide", "id": "AT4G03450.2", "url": "https://www.ensemblgenomes.org/id/AT4G03450.2" } ] } }, { "isoform_ac": "Q9ZT73-1", "url": "https://www.uniprot.org/uniprotkb/Q9ZT73/entry", "sequence": { "sequence": "MTRAFHLIIDCITGDTGSIQMLVTNLYDLPGEYVSMNPEIFSAMRAGNVKFLDKMKTNNNTPLACFRNETGDFTLHLAAAWGRLELVKRIVSECPCLLLETNSKDQIPLHAAAAAGRLAVVEAFVARVNEISDGLSEEERERVNLYAMKDIDGNTALHLALKGGHLKTAACLVKANHLASFLANNHGVSPLFTAIIAGSLTLVEAMMYVPGQTCNLASKLEGRKSLVHAALKAKNSDILDVILSEDPSLVNERDEEGRTCLSVAAYVGYYKGVVNLLHRSTSNVFECDDDGSYPIHMAVEKGRVKIFLKLLKCCPDSQYLLNKQGQNILHIAAKSGKTGTYLLQVIKAYDLIKNDLIMEQDVDGNTPLHLATLTWRPRTVNILNKFTLGNHLHIRNKDGLSALDIAESNLQSNYVFRERMTLMVLLCTCSPRGFKMIPTSGITLKSRSEKVAGNKYKDSINVLLLVATLVATVAFAAGIAIPGGFSSSTPKRGIAILDDDDFLSIFLVFNTLAMQSSVLAIVALIWAQLGDPVLVHKTFHLALPALFVSLVSMSSAFFCGVVATTKHNPWLFDSIIFISIIFLFVVAYLLAPYAIPQFPGTPFLQRITKCYLDFMLLFVNEDDVDIVCEKKQETVHLYVAN", "length": 641, "header": "tr|Q9ZT73-1|Q9ZT73_ARATH Isoform 1 of Ankyrin repeat family protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9ZT73-1" }, "locus": { "chromosome": "4", "start_pos": 1529372, "end_pos": 1531819, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT4G03450.1", "url": "https://www.ensemblgenomes.org/id/AT4G03450.1" }, { "database": "Ensembl Peptide", "id": "AT4G03450.1", "url": "https://www.ensemblgenomes.org/id/AT4G03450.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "1999", "authors": "Mayer K, Sch\u00fcller C, Wambutt R, Murphy G, Volckaert G, Pohl T, D\u00fcsterh\u00f6ft A, Stiekema W, Entian K D, Terryn N, Harris B, Ansorge W, Brandt P, Grivell L, Rieger M, Weichselgartner M, de Simone V, Obermaier B, Mache R, M\u00fcller M, Kreis M, Delseny M, Puigdomenech P, Watson M, Schmidtheini T, Reichert B, Portatelle D, 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"comment": "", "evidence": [ { "database": "iPTMnet", "id": "A0A1P8B6C4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A0A1P8B6C4" } ], "site_lbl": "Thr473" }, { "start_pos": 723, "end_pos": 723, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Thr", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "A0A1P8B6C4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A0A1P8B6C4" } ], "site_lbl": "Thr723" }, { "start_pos": 724, "end_pos": 724, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Thr", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "A0A1P8B6C4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/A0A1P8B6C4" } ], "site_lbl": "Thr724" }, { "start_pos": 726, "end_pos": 726, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "A0A1P8B6C4", "url": 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Chuang Y J, Vandenbussche F, Braeken M, Weltjens I, Voet M, Bastiaens I, Aert R, Defoor E, Weitzenegger T, Bothe G, Ramsperger U, Hilbert H, Braun M, Holzer E, Brandt A, Peters S, van Staveren M, Dirske W, Mooijman P, Klein Lankhorst R, Rose M, Hauf J, K\u00f6tter P, Berneiser S, Hempel S, Feldpausch M, Lamberth S, Van den Daele H, De Keyser A, Buysshaert C, Gielen J, Villarroel R, De Clercq R, Van Montagu M, Rogers J, Cronin A, Quail M, Bray-Allen S, Clark L, Doggett J, Hall S, Kay M, Lennard N, McLay K, Mayes R, Pettett A, Rajandream M A, Lyne M, Benes V, Rechmann S, Borkova D, Bl\u00f6cker H, Scharfe M, Grimm M, L\u00f6hnert T H, Dose S, de Haan M, Maarse A, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Fartmann B, Granderath K, Dauner D, Herzl A, Neumann S, Argiriou A, Vitale D, Liguori R, Piravandi E, Massenet O, Quigley F, Clabauld G, M\u00fcndlein A, Felber R, Schnabl S, Hiller R, Schmidt W, Lecharny A, Aubourg S, Chefdor F, Cooke R, Berger C, Montfort A, Casacuberta E, 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"10617197", "url": "https://glygen.org/publication/PubMed/10617197" } ] }, { "title": "Quantitative phosphoproteomics of early elicitor signaling in Arabidopsis.", "journal": "Molecular & cellular proteomics : MCP", "date": "2007-07", "authors": "Benschop Joris J, Mohammed Shabaz, O'Flaherty Martina, Heck Albert J R, Slijper Monique, Menke Frank L H", "evidence": [ { "database": "iPTMnet", "id": "Q9ZVX3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9ZVX3" } ], "reference": [ { "type": "PubMed", "id": "17317660", "url": "https://glygen.org/publication/PubMed/17317660" } ] }, { "title": "Large-scale phosphorylation mapping reveals the extent of tyrosine phosphorylation in Arabidopsis.", "journal": "Molecular systems biology", "date": "2008", "authors": "Sugiyama Naoyuki, Nakagami Hirofumi, Mochida Keiichi, Daudi Arsalan, Tomita Masaru, Shirasu Ken, Ishihama Yasushi", "evidence": [ { "database": "iPTMnet", "id": "Q9ZVX3", "url": 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"Hoehenwarter Wolfgang, Thomas Martin, Nukarinen Ella, Egelhofer Volker, R\u00f6hrig Horst, Weckwerth Wolfram, Conrath Uwe, Beckers Gerold J M", "evidence": [ { "database": "iPTMnet", "id": "Q9ZVX3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9ZVX3" } ], "reference": [ { "type": "PubMed", "id": "23172892", "url": "https://glygen.org/publication/PubMed/23172892" } ] }, { "title": "Quantitative phosphoproteomics after auxin-stimulated lateral root induction identifies an SNX1 protein phosphorylation site required for growth.", "journal": "Molecular & cellular proteomics : MCP", "date": "2013-05", "authors": "Zhang Hongtao, Zhou Houjiang, Berke Lidija, Heck Albert J R, Mohammed Shabaz, Scheres Ben, Menke Frank L H", "evidence": [ { "database": "iPTMnet", "id": "Q9ZVX3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9ZVX3" } ], "reference": [ { "type": "PubMed", "id": "23328941", "url": "https://glygen.org/publication/PubMed/23328941" } ] }, { "title": "Genetics and phosphoproteomics reveal a protein phosphorylation network in the abscisic acid signaling pathway in Arabidopsis thaliana.", "journal": "Science signaling", "date": "2013-04-09", "authors": "Umezawa Taishi, Sugiyama Naoyuki, Takahashi Fuminori, Anderson Jeffrey C, Ishihama Yasushi, Peck Scott C, Shinozaki Kazuo", "evidence": [ { "database": "iPTMnet", "id": "Q9ZVX3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9ZVX3" } ], "reference": [ { "type": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" } ] }, { "title": "Quantitative phosphoproteomics identifies SnRK2 protein kinase substrates and reveals the effectors of abscisic acid action.", "journal": "Proceedings of the National Academy of Sciences of the United States of America", "date": "2013-07-02", "authors": "Wang Pengcheng, Xue Liang, Batelli Giorgia, Lee Shinyoung, Hou Yueh-Ju, Van Oosten Michael J, Zhang Huiming, Tao W Andy, Zhu Jian-Kang", "evidence": [ { "database": "iPTMnet", "id": "Q9ZVX3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9ZVX3" } ], "reference": [ { "type": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" } ] }, { "title": "Quantitative phosphoproteomics of the ataxia telangiectasia-mutated (ATM) and ataxia telangiectasia-mutated and rad3-related (ATR) dependent DNA damage response in Arabidopsis thaliana.", "journal": "Molecular & cellular proteomics : MCP", "date": "2015-03", "authors": "Roitinger Elisabeth, Hofer Manuel, K\u00f6cher Thomas, Pichler Peter, Novatchkova Maria, Yang Jianhua, Schl\u00f6gelhofer Peter, Mechtler Karl", "evidence": [ { "database": "iPTMnet", "id": "Q9ZVX3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9ZVX3" } ], "reference": [ { "type": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] }, { "title": "Quantitative Circadian Phosphoproteomic Analysis of Arabidopsis Reveals Extensive Clock Control of Key Components in Physiological, Metabolic, and Signaling Pathways.", "journal": "Molecular & cellular proteomics : MCP", "date": "2015-08", "authors": "Choudhary Mani Kant, Nomura Yuko, Wang Lei, Nakagami Hirofumi, Somers David E", "evidence": [ { "database": "iPTMnet", "id": "Q9ZVX3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9ZVX3" } ], "reference": [ { "type": "PubMed", "id": "26091701", "url": "https://glygen.org/publication/PubMed/26091701" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "A8MRF0", "url": "https://www.uniprot.org/uniprotkb/A8MRF0" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] }, { "title": 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"https://www.uniprot.org/uniprotkb/Q9ZSI4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9ZSI4-1", "url": "https://www.uniprot.org/uniprotkb/Q9ZSI4-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MGRHSCCYKQKLRKGLWSPEEDEKLLRYITKYGHGCWSSVPKQAGTFLFIQIHLLFGLQRCGKSCRLRWINYLRPDLKRGAFSQDEENLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCLKKKLRLRGIDPVTHKLLTEIETGTDDKTKPVEKSQQTYLVETDGSSSTTTCSTNQNNNTDHLYTGNFGFQRLSLENGSRIAAGSDLGIWIPQTGRNHHHHVDETIPSAVVLPGSMFSSGLTGYRSSNLGLIELENSFSTGPMMTEHQQIQESNYNNSTFFGNGNLNWGLTMEENQNPFTISNHSNSSLYSDIKSETNFFGTEATNVGMWPCNQLQPQQHAYGHI", "length": 348, "header": "tr|Q9ZSI4-1|Q9ZSI4_ARATH Isoform 1 of Myb domain protein 55 OS=Arabidopsis thaliana OX=3702 GN=MYB55 PE=1 SV=1 CANONICAL=Q9ZSI4-1" }, "isoforms": [ { "isoform_ac": "B3H664-1", "url": "https://www.uniprot.org/uniprotkb/B3H664/entry", "sequence": { "sequence": 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"MGRHSCCYKQKLRKGLWSPEEDEKLLRYITKYGHGCWSSVPKQAGLQRCGKSCRLRWINYLRPDLKRGAFSQDEENLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCLKKKLRLRGIDPVTHKLLTEIETGTDDKTKPVEKSQQTYLVETDGSSSTTTCSTNQNNNTDHLYTGNFGFQRLSLENGSRIAAGSDLGIWIPQTGRNHHHHVDETIPSAVVLPGSMFSSGLTGYRSSNLGLIELENSFSTGPMMTEHQQIQESNYNNSTFFGNGNLNWGLTMEENQNPFTISNHSNSSLYSDIKSETNFFGTEATNVGMWPCNQLQPQQHAYGHI", "length": 336, "header": "tr|Q9M118-1|Q9ZSI4_ARATH Computationally mapped isoform of Myb domain protein 55 OS=Arabidopsis thaliana OX=3702 GN=MYB55 PE=1 SV=1 CANONICAL=Q9ZSI4-1" }, "locus": { "chromosome": "4", "start_pos": 715970, "end_pos": 717603, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT4G01680.1", "url": "https://www.ensemblgenomes.org/id/AT4G01680.1" }, { "database": "Ensembl Peptide", "id": "AT4G01680.1", "url": "https://www.ensemblgenomes.org/id/AT4G01680.1" } ] } }, { "isoform_ac": "Q9ZSI4-1", "url": "https://www.uniprot.org/uniprotkb/Q9ZSI4/entry", "sequence": { "sequence": 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"date": "2013-01-14", "authors": "Wang Xu, Bian Yangyang, Cheng Kai, Gu Li-Fei, Ye Mingliang, Zou Hanfa, Sun Samuel Sai-Ming, He Jun-Xian", "evidence": [ { "database": "iPTMnet", "id": "Q9ZPZ0", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9ZPZ0" } ], "reference": [ { "type": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" } ] }, { "title": "Quantitative phosphoproteomics after auxin-stimulated lateral root induction identifies an SNX1 protein phosphorylation site required for growth.", "journal": "Molecular & cellular proteomics : MCP", "date": "2013-05", "authors": "Zhang Hongtao, Zhou Houjiang, Berke Lidija, Heck Albert J R, Mohammed Shabaz, Scheres Ben, Menke Frank L H", "evidence": [ { "database": "iPTMnet", "id": "Q9ZPZ0", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9ZPZ0" } ], "reference": [ { "type": "PubMed", "id": "23328941", "url": "https://glygen.org/publication/PubMed/23328941" } ] }, { "title": 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Carolyn C, Onodera Courtney S, Deng Justine M, Akiyama Kenji, Ansari Yasser, Arakawa Takahiro, Banh Jenny, Banno Fumika, Bowser Leah, Brooks Shelise, Carninci Piero, Chao Qimin, Choy Nathan, Enju Akiko, Goldsmith Andrew D, Gurjal Mani, Hansen Nancy F, Hayashizaki Yoshihide, Johnson-Hopson Chanda, Hsuan Vickie W, Iida Kei, Karnes Meagan, Khan Shehnaz, Koesema Eric, Ishida Junko, Jiang Paul X, Jones Ted, Kawai Jun, Kamiya Asako, Meyers Cristina, Nakajima Maiko, Narusaka Mari, Seki Motoaki, Sakurai Tetsuya, Satou Masakazu, Tamse Racquel, Vaysberg Maria, Wallender Erika K, Wong Cecilia, Yamamura Yuki, Yuan Shiaulou, Shinozaki Kazuo, Davis Ronald W, Theologis Athanasios, Ecker Joseph R", "evidence": [ { "database": "UniProtKB", "id": "Q9ZQ60", "url": "https://www.uniprot.org/uniprotkb/Q9ZQ60" } ], "reference": [ { "type": "PubMed", "id": "14593172", "url": "https://glygen.org/publication/PubMed/14593172" } ] }, { "title": "Analysis of the cDNAs of hypothetical genes on Arabidopsis 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"MGLKRPYDAEEMQKCNAKHARQLSYKNHNQFDEAIPYHHASMEKKTNVLVEDLIGLCENPTWTNDANHVDKGFETTGLCQEDSQSGVTTQSDLSHQSSGSDFTWKPVEDVYTCLMNQPPRKQVLVGSNHQADIPEFVKEEILDQSEARTKEDLEGKLMRKCVIPMSDSDLCGTGQGRKECLCLDKGSIRCVRRHIIEARESLVETIGYERFMELGLCEMGEEVASLWTEEEEDLFHKVVYSNPFSAGRDFWKQLKGTFPSRTMKELVSYYFNVFILRRRGIQNRFKALDVDSDDDEWQVEYNIFNSTKSLDEEDNNGNRSSYEDNEEEEETSSNDDDEEEEEEDDSSSNDAHCVDTDKASRDGFGEEVNVEDDSCMSFELQDSNLIFSHNPIKNRECHRSGEDSYSFDDQRFTSDCWNKNNDLLPTSNIIEEIFGQDDWGDKDDNNLKEK", "length": 450, "header": "tr|Q9ZQ83-1|Q9ZQ83_ARATH Isoform 1 of ELM2 domain-containing protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9ZQ83-1" }, "isoforms": [ { "isoform_ac": "F4IT71-1", "url": "https://www.uniprot.org/uniprotkb/F4IT71/entry", "sequence": { "sequence": 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"MASTIIFILTIFLSYRTSLATSRGSLFEASAIEKHEQWMARFNRVYSDETEKRNRFNIFKKNLEFVQNFNMNNKITYKVDINEFSDLTDEEFRATHTGLVVPEAITRISTLSSGKNTVPFRYGNVSDNGESMDWRQEGAVTPVKYQGRCGGCWAFSAVAAVEGITKITKGELVSLSEQQLLDCDRDYNQGCRGGIMSKAFEYIIKNQGITTEDNYPYQESQQTCSSSTTLSSSFRAATISGYETVPMNNEEALLQAVSQQPVSVGIEGTGAAFRHYSGGVFNGECGTDLHHAVTIVGYGMSEEGTKYWVVKNSWGETWGENGYMRIKRDVDAPQGMCGLAILAFYPLA", "length": 348, "header": "tr|Q9ZQH7-1|Q9ZQH7_ARATH Isoform 1 of Cysteine proteinases superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9ZQH7-1" }, "locus": { "chromosome": "2", "start_pos": 11726134, "end_pos": 11727654, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT2G27420.1", "url": "https://www.ensemblgenomes.org/id/AT2G27420.1" }, { "database": "Ensembl Peptide", "id": "AT2G27420.1", "url": "https://www.ensemblgenomes.org/id/AT2G27420.1" } ] } } ], "glycosylation": [], "phosphorylation": [ { "start_pos": 117, "end_pos": 117, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Thr", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9ZQH7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9ZQH7" }, { "database": "PubMed", "id": "28011693", "url": "https://glygen.org/publication/PubMed/28011693" } ], "site_lbl": "Thr117" } ], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "1999", "authors": "Lin X, Kaul S, Rounsley S, Shea T P, Benito M I, Town C D, Fujii C Y, Mason T, Bowman C L, Barnstead M, Feldblyum T V, Buell C R, Ketchum K A, Lee J, Ronning C M, Koo H L, Moffat K S, Cronin L A, Shen M, Pai G, Van Aken S, Umayam L, Tallon L J, Gill J E, Adams M D, Carrera A J, Creasy T H, Goodman H M, Somerville C R, Copenhaver G P, Preuss D, Nierman W C, White O, Eisen J A, Salzberg S L, Fraser C M, Venter J C", "evidence": [ { "database": "UniProtKB", "id": "Q9ZQH7", "url": "https://www.uniprot.org/uniprotkb/Q9ZQH7" } ], "reference": [ { "type": "PubMed", "id": "10617197", "url": "https://glygen.org/publication/PubMed/10617197" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9ZQH7", "url": "https://www.uniprot.org/uniprotkb/Q9ZQH7" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] }, { "title": "Protein Phosphatase 2Cs and Microtubule-Associated Stress Protein 1 Control Microtubule Stability, Plant Growth, and Drought Response.", "journal": "The Plant cell", "date": "2017-01", "authors": "Bhaskara Govinal Badiger, Wen Tuan-Nan, Nguyen Thao Thi, Verslues Paul E", "evidence": [ { "database": "iPTMnet", "id": "Q9ZQH7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9ZQH7" } ], "reference": [ { "type": "PubMed", "id": "28011693", "url": "https://glygen.org/publication/PubMed/28011693" } ] } ], "pathway": [ { "id": "ath:AT2G27420", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT2G27420", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "D3ZZ07-1", "protein_name": "Cathepsin 7", "gene_name": "Cts7", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MTVAVFLAILCLRAALAAPRPDYSLDAEWEEWKRNNAKTYSPEEEKQRRAVWEENVKMIKWHTMQNGLWMNNFTIEMNEFGDMTGEEMRMMTDSSALTLRNGKHIQKRNVKIPKTLDWRDTGCVAPVRSQGGCGACWAFSVAASIESQLFKKTGKLIPLSVQNLIDCTVTYGNNDCSGGKPYTAFQYVKNNGGLEAEATYPYEAKLRHCRYRPERSVVKIARFFVVPRNEEALMQALVTYGPIAVAIDGSHASFKRYRGGIYHEPKCRRDTLDHGLLLVGYGYEGHESENRKYWLLKNSHGEQWGERGYMKLPRDQNNYCGIASYAMYPLL", "length": 331 }, "evidence": [ { "id": "Q9ZQH7", "url": "https://omabrowser.org/oma/group/Q9ZQH7/", "database": "OMA" } ], "glygen_name": "Rat", 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"https://www.uniprot.org/uniprotkb/Q9ZQI9", "locus": {} } ], "crossref": [ { "id": "cd07438", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd07438", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "815867", "url": "https://www.ncbi.nlm.nih.gov/gene/815867", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR003141", "url": "https://www.ebi.ac.uk/interpro/entry/IPR003141", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR004013", "url": "https://www.ebi.ac.uk/interpro/entry/IPR004013", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR016195", "url": "https://www.ebi.ac.uk/interpro/entry/IPR016195", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR052018", "url": "https://www.ebi.ac.uk/interpro/entry/IPR052018", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT2G13840", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT2G13840", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "IPLKWEH", "url": "https://omabrowser.org/oma/group/IPLKWEH/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "Q9ZQI9", "url": "https://www.orthodb.org/?gene=Q9ZQI9", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR42924", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR42924", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR42924:SF3", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR42924:SF3", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF02811", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF02811", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "AT2G13840", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT2G13840", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9ZQI9", "url": "https://www.uniprot.org/uniprotkb/Q9ZQI9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9ZQI9-1", "url": "https://www.uniprot.org/uniprotkb/Q9ZQI9-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MADDKKKRNKKKKRSTGNKRKMTTEQSEAFKSITDWLILGSSPSLSSSSDDFAVNINSGSLRCGEKVVFELHSHSNRSDGFLSPSKVVERAYNNGVKVLSLTDHDTMAGVPEAVEAGRRFGIKIIPGIEISTLFGLRDSGSEEPVHILAYYGTSGPALYDELEDFLVKIRDGRFVRGREMVLKLNKLKIPLKWEHVTRIAGKDVAPGRMHVARALLEAGYVENLRQAFTKYLHDGGPAYATGTEPMAEEAVKLICKTGGVAVLAHPWALKNHVGIIRRLKDAGLHGVEVYRSDGKLEVFSELADTYNLLKLGGSDYHGKGGRNESELGSVNLPVTALQDFLNVGRPIWCEAIKATMRAFLDQPSDSNLSNILRFDKARILKGNSAWSCGKELMDRCLAIWLTSDERNSNDFEALRLKLSFVPIMSNGTCVTVGP", "length": 434, "header": "tr|Q9ZQI9-1|Q9ZQI9_ARATH Isoform 1 of Polymerase/histidinol phosphatase-like protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=2 CANONICAL=Q9ZQI9-1" }, "isoforms": [ { 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"url": "https://www.ensemblgenomes.org/id/AT2G13840.1" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "other", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 431, "start_aa": "Thr", "end_pos": 431, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr431", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ], "filter_code": "000000000000000010000.00000000001000.0.01000" } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "1999", "authors": "Lin X, Kaul S, Rounsley S, Shea T P, Benito M I, Town C D, Fujii C Y, Mason T, Bowman C L, Barnstead M, Feldblyum T V, Buell C R, Ketchum K A, Lee J, Ronning C M, Koo H L, Moffat K S, Cronin L A, Shen M, Pai G, Van Aken S, Umayam L, Tallon L J, Gill J E, Adams M D, Carrera A J, Creasy T H, Goodman H M, Somerville C R, Copenhaver G P, Preuss D, Nierman W C, White O, Eisen J A, Salzberg S L, Fraser C M, Venter J C", "evidence": [ { "database": "UniProtKB", "id": "Q9ZQI9", "url": "https://www.uniprot.org/uniprotkb/Q9ZQI9" } ], "reference": [ { "type": "PubMed", "id": "10617197", "url": "https://glygen.org/publication/PubMed/10617197" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9ZQI9", "url": "https://www.uniprot.org/uniprotkb/Q9ZQI9" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT2G13840", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT2G13840", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "Q9ZQI9", "url": "https://www.uniprot.org/uniprotkb/Q9ZQI9" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "5'-3' RNA exonuclease activity", "id": "GO:0004534", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004534", "evidence": [ { "database": "UniProtKB", "id": "Q9ZQI9", "url": "https://www.uniprot.org/uniprotkb/Q9ZQI9" } ], "pmid": "" }, { "name": "5'-3' DNA exonuclease activity", "id": "GO:0035312", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0035312", "evidence": [ { "database": "UniProtKB", "id": "Q9ZQI9", "url": "https://www.uniprot.org/uniprotkb/Q9ZQI9" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 323, "end_pos": 325, "annotation": "n_glycosylation_sequon" }, { "start_pos": 367, "end_pos": 369, "annotation": "n_glycosylation_sequon" }, { "start_pos": 426, "end_pos": 428, "annotation": "n_glycosylation_sequon" }, { "start_pos": 76, "end_pos": 78, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "Q9ZQI9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9ZQI9" }, { "id": "SM00481", "database": "SMART", "url": "http://smart.embl.de/smart/do_annotation.pl?DOMAIN=SM00481" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Polymerase/histidinol phosphatase N-terminal", 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"Q9ZQX3", "uniprot_id": "Q9ZQX3_ARATH", "mass": { "chemical_mass": 94854.0, "monoisotopic_mass": 94854.0 }, "refseq": {}, "gene_names": [ { "name": "T10P11.27", "type": "synonym", "evidence": [ { "id": "Q9ZQX3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9ZQX3" } ] }, { "name": "T10P11_27", "type": "synonym", "evidence": [ { "id": "Q9ZQX3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9ZQX3" } ] } ], "protein_names": [ { "name": "Cysteine/Histidine-rich C1 domain family protein", "type": "synonym", "evidence": [ { "id": "Q9ZQX3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9ZQX3/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9ZQX3", "url": "https://www.uniprot.org/uniprotkb/Q9ZQX3" } ], "common_name": 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"https://www.ebi.ac.uk/interpro/entry/IPR053192", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR054483", "url": "https://www.ebi.ac.uk/interpro/entry/IPR054483", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT4G02540", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT4G02540", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "PTHR32410", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR32410", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR32410:SF153", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR32410:SF153", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF03107", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF03107", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF22926", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF22926", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "AT4G02540", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT4G02540", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "F4JHK3", "url": "https://www.uniprot.org/uniprotkb/F4JHK3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F4JHK3-1", "url": "https://www.uniprot.org/uniprotkb/F4JHK3-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9ZQX3", "url": "https://www.uniprot.org/uniprotkb/Q9ZQX3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9ZQX3-1", "url": "https://www.uniprot.org/uniprotkb/Q9ZQX3-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MDFDSQQKPESELISLIEKIIFVGKPESQLVVSLVTQTISLIRSIDSDPDTKQDSEPELMSLISQIYSYLESRNSDELSSLLDQIVSLVESTYSEPPEMKLASLIKKLMPLIDTQIPPIFTGKSLTYDAKLLLYTKTLASRDANVVSLIVEIVTLVNSTDLDSLPESELMSVVTQTISFFNSMDLDSQPEPLRKLISIFSQKYFSDSELELALDWDFMSLVDKTLTFEPEPKLISLILEIVTLVFSMYTQWDKLISLCPRLNVSLKEEKFHVEPKYKMWNGKLECLPFNWQKFWLTRGELASHFLCQGCNGKNHKEYNKAPAEIKHPFHPKHPLLLVSLQMLSSTRKCYCCDEDLKNIFYYCSACEFAVNFACVQKPPELSMHHPKWHEHTLALFPTQTPFPCSICALTHSSGPFYTSSGPFYTCPPCDFVIHQKCFSLPRVIRISRHPHRISFTPSFDPEKYWSCGVCRRKIENDYGCYSCVKDGCSYAAHSKCATQTNVWDGKELEGEPEEDMDEEVESFVTISDGIIQHFSHEHHHMRLDVNTDRDYDENKLCQACTTPIYFGNFFSCMQCDFILHEKCANFRRKIHHPTHPHLLTLSRTYEGEHHAFACSACSVWCTAGFFYECNEEACYFKVHVQCATISEPLVHESHMHPLFLTSKPEEEQRTCNVCHNLRRGGSETFNCIEECNFSLCFGCATIPHKARYKHDKHMLTISYGEKTSTMTYWCEVCEGKIDPKERFYMCDEYCCVTLHMPCMLGWDLYMKPGSSWIRGSKKVYALPNNHHMSRPICPRCERRCPYKTVLKENELAFCSILCIMWKK", "length": 822, "header": "tr|Q9ZQX3-1|Q9ZQX3_ARATH Isoform 1 of Cysteine/Histidine-rich C1 domain family protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9ZQX3-1" }, "isoforms": [ { "isoform_ac": "F4JHK3-1", "url": "https://www.uniprot.org/uniprotkb/F4JHK3/entry", "sequence": { "sequence": "MDFDSQQKPESELISLIEKIIFVGKPESQLVVSLVTQTISLIRSIDSDPDTKQDSEPELMSLISQIYSYLESRNSDELSSLLDQIVSLVESTYSEPPEMKLASLIKKLMPLIDTQIPPIFTGKSLTYDAKLLLYTKTLASRDANVVSLIVEIVTLVNSTDLDSLPESELMSVVTQTISFFNSMDLDSQPEPLRKLISIFSQKYFSDSELELALDWDFMSLVDKTLTFEPEPKLISLILEIVTLVFSMYTQWDKLISLCPRLNVSLKEEKFHVEPKYKMWNGKLECLPFNWQKFWLTRGELASHFLCQGCNGKNHKEYNKAPAEIKHPFHPKHPLLLVSLQMLSSTRKCYCCDEDLKNIFYYCSACEFAVNFACVQKPPELSMHHPKWHEHTLALFPTQTPFPCSICALTHSSGPFYTSSGPFYTCPPCDFVIHQKCFSLPRVIRISRHPHRISFTPSFDPEKYWSCGVCRRKIENDYGCYSCVKDGCSYAAHSKCATQTNVWDGKELEGEPEEDMDEEVESFVTISDGIIQHFSHEHHHMRLDVNTDRDYDENKLCQACTTPIYFEHTKVSIMRLHVQLVLCGALLVSSMSAMKKHVILRYMCSAPQFLSR", "length": 611, "header": "tr|F4JHK3-1|F4JHK3_ARATH Computationally mapped isoform of Cysteine/Histidine-rich C1 domain family protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9ZQX3-1" }, "locus": { "chromosome": "4", "start_pos": 1116972, "end_pos": 1119877, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT4G02540.2", "url": "https://www.ensemblgenomes.org/id/AT4G02540.2" }, { "database": "Ensembl Peptide", "id": "AT4G02540.2", "url": "https://www.ensemblgenomes.org/id/AT4G02540.2" } ] } }, { "isoform_ac": "Q9ZQX3-1", "url": "https://www.uniprot.org/uniprotkb/Q9ZQX3/entry", "sequence": { "sequence": "MDFDSQQKPESELISLIEKIIFVGKPESQLVVSLVTQTISLIRSIDSDPDTKQDSEPELMSLISQIYSYLESRNSDELSSLLDQIVSLVESTYSEPPEMKLASLIKKLMPLIDTQIPPIFTGKSLTYDAKLLLYTKTLASRDANVVSLIVEIVTLVNSTDLDSLPESELMSVVTQTISFFNSMDLDSQPEPLRKLISIFSQKYFSDSELELALDWDFMSLVDKTLTFEPEPKLISLILEIVTLVFSMYTQWDKLISLCPRLNVSLKEEKFHVEPKYKMWNGKLECLPFNWQKFWLTRGELASHFLCQGCNGKNHKEYNKAPAEIKHPFHPKHPLLLVSLQMLSSTRKCYCCDEDLKNIFYYCSACEFAVNFACVQKPPELSMHHPKWHEHTLALFPTQTPFPCSICALTHSSGPFYTSSGPFYTCPPCDFVIHQKCFSLPRVIRISRHPHRISFTPSFDPEKYWSCGVCRRKIENDYGCYSCVKDGCSYAAHSKCATQTNVWDGKELEGEPEEDMDEEVESFVTISDGIIQHFSHEHHHMRLDVNTDRDYDENKLCQACTTPIYFGNFFSCMQCDFILHEKCANFRRKIHHPTHPHLLTLSRTYEGEHHAFACSACSVWCTAGFFYECNEEACYFKVHVQCATISEPLVHESHMHPLFLTSKPEEEQRTCNVCHNLRRGGSETFNCIEECNFSLCFGCATIPHKARYKHDKHMLTISYGEKTSTMTYWCEVCEGKIDPKERFYMCDEYCCVTLHMPCMLGWDLYMKPGSSWIRGSKKVYALPNNHHMSRPICPRCERRCPYKTVLKENELAFCSILCIMWKK", "length": 822, "header": "tr|Q9ZQX3-1|Q9ZQX3_ARATH Isoform 1 of Cysteine/Histidine-rich C1 domain family protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9ZQX3-1" }, "locus": { "chromosome": "4", "start_pos": 1116999, "end_pos": 1119836, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT4G02540.1", "url": "https://www.ensemblgenomes.org/id/AT4G02540.1" }, { "database": "Ensembl Peptide", "id": "AT4G02540.1", "url": "https://www.ensemblgenomes.org/id/AT4G02540.1" } ] } } ], "glycosylation": [], "phosphorylation": [ { "start_pos": 79, "end_pos": 79, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9ZQX3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9ZQX3" } ], "site_lbl": "Ser79" }, { "start_pos": 80, "end_pos": 80, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9ZQX3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9ZQX3" } ], "site_lbl": "Ser80" }, { "start_pos": 93, "end_pos": 93, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Tyr", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9ZQX3", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9ZQX3" } ], "site_lbl": "Tyr93" } ], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "1999", "authors": "Mayer K, Sch\u00fcller C, Wambutt R, Murphy G, Volckaert G, Pohl T, D\u00fcsterh\u00f6ft A, Stiekema W, Entian K D, Terryn N, Harris B, Ansorge W, Brandt P, Grivell L, Rieger M, Weichselgartner M, de Simone V, Obermaier B, Mache R, M\u00fcller M, Kreis M, Delseny M, Puigdomenech P, Watson M, Schmidtheini T, Reichert B, Portatelle D, Perez-Alonso M, Boutry M, Bancroft I, Vos P, Hoheisel J, Zimmermann W, Wedler H, Ridley P, Langham S A, McCullagh B, Bilham L, Robben J, Van der Schueren J, Grymonprez B, Chuang Y J, Vandenbussche F, Braeken M, Weltjens I, Voet M, Bastiaens I, Aert R, Defoor E, Weitzenegger T, Bothe G, Ramsperger U, Hilbert H, Braun M, Holzer E, Brandt A, Peters S, van Staveren M, Dirske W, Mooijman P, Klein Lankhorst R, Rose M, Hauf J, K\u00f6tter P, Berneiser S, Hempel S, Feldpausch M, Lamberth S, Van den Daele H, De Keyser A, Buysshaert C, Gielen J, Villarroel R, De Clercq R, Van Montagu M, Rogers J, Cronin A, Quail M, Bray-Allen S, Clark L, Doggett J, Hall S, Kay M, Lennard N, McLay K, Mayes R, Pettett A, Rajandream M A, Lyne M, Benes V, Rechmann S, Borkova D, Bl\u00f6cker H, Scharfe M, Grimm M, L\u00f6hnert T H, Dose S, de Haan M, Maarse A, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Fartmann B, Granderath K, Dauner D, Herzl A, Neumann S, Argiriou A, Vitale D, Liguori R, Piravandi E, Massenet O, Quigley F, Clabauld G, M\u00fcndlein A, Felber R, Schnabl S, Hiller R, Schmidt W, Lecharny A, Aubourg S, Chefdor F, Cooke R, Berger C, Montfort A, Casacuberta E, Gibbons T, Weber N, Vandenbol M, Bargues M, Terol J, Torres A, Perez-Perez A, Purnelle B, Bent E, Johnson S, Tacon D, Jesse T, Heijnen L, Schwarz S, Scholler P, Heber S, Francs P, Bielke C, Frishman D, Haase D, Lemcke K, Mewes H W, Stocker S, Zaccaria P, Bevan M, Wilson R K, de la Bastide M, Habermann K, Parnell L, Dedhia N, Gnoj L, Schutz K, Huang E, Spiegel L, Sehkon M, Murray J, Sheet P, Cordes M, Abu-Threideh J, Stoneking T, Kalicki J, Graves T, Harmon G, Edwards J, Latreille P, Courtney L, Cloud J, Abbott A, Scott K, Johnson D, Minx P, Bentley D, Fulton B, Miller N, Greco T, Kemp K, Kramer J, Fulton L, Mardis E, Dante M, Pepin K, Hillier L, Nelson J, Spieth J, Ryan E, Andrews S, Geisel C, Layman D, Du H, Ali J, Berghoff A, Jones K, Drone K, Cotton M, Joshu C, Antonoiu B, Zidanic M, Strong C, Sun H, Lamar B, Yordan C, Ma P, Zhong J, Preston R, Vil D, Shekher M, Matero A, Shah R, Swaby I K, O'Shaughnessy A, Rodriguez M, Hoffmann J, Till S, Granat S, Shohdy N, Hasegawa A, Hameed A, Lodhi M, Johnson A, Chen E, Marra M, Martienssen R, McCombie W R", "evidence": [ { "database": "UniProtKB", "id": "Q9ZQX3", "url": "https://www.uniprot.org/uniprotkb/Q9ZQX3" } ], "reference": [ { "type": "PubMed", "id": "10617198", "url": "https://glygen.org/publication/PubMed/10617198" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9ZQX3", "url": "https://www.uniprot.org/uniprotkb/Q9ZQX3" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT4G02540", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT4G02540", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": 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V, Rechmann S, Borkova D, Bl\u00f6cker H, Scharfe M, Grimm M, L\u00f6hnert T H, Dose S, de Haan M, Maarse A, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Fartmann B, Granderath K, Dauner D, Herzl A, Neumann S, Argiriou A, Vitale D, Liguori R, Piravandi E, Massenet O, Quigley F, Clabauld G, M\u00fcndlein A, Felber R, Schnabl S, Hiller R, Schmidt W, Lecharny A, Aubourg S, Chefdor F, Cooke R, Berger C, Montfort A, Casacuberta E, Gibbons T, Weber N, Vandenbol M, Bargues M, Terol J, Torres A, Perez-Perez A, Purnelle B, Bent E, Johnson S, Tacon D, Jesse T, Heijnen L, Schwarz S, Scholler P, Heber S, Francs P, Bielke C, Frishman D, Haase D, Lemcke K, Mewes H W, Stocker S, Zaccaria P, Bevan M, Wilson R K, de la Bastide M, Habermann K, Parnell L, Dedhia N, Gnoj L, Schutz K, Huang E, Spiegel L, Sehkon M, Murray J, Sheet P, Cordes M, Abu-Threideh J, Stoneking T, Kalicki J, Graves T, Harmon G, Edwards J, Latreille P, Courtney L, Cloud J, Abbott A, Scott K, Johnson D, Minx P, Bentley D, 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"Nature", "date": "1999", "authors": "Mayer K, Sch\u00fcller C, Wambutt R, Murphy G, Volckaert G, Pohl T, D\u00fcsterh\u00f6ft A, Stiekema W, Entian K D, Terryn N, Harris B, Ansorge W, Brandt P, Grivell L, Rieger M, Weichselgartner M, de Simone V, Obermaier B, Mache R, M\u00fcller M, Kreis M, Delseny M, Puigdomenech P, Watson M, Schmidtheini T, Reichert B, Portatelle D, Perez-Alonso M, Boutry M, Bancroft I, Vos P, Hoheisel J, Zimmermann W, Wedler H, Ridley P, Langham S A, McCullagh B, Bilham L, Robben J, Van der Schueren J, Grymonprez B, Chuang Y J, Vandenbussche F, Braeken M, Weltjens I, Voet M, Bastiaens I, Aert R, Defoor E, Weitzenegger T, Bothe G, Ramsperger U, Hilbert H, Braun M, Holzer E, Brandt A, Peters S, van Staveren M, Dirske W, Mooijman P, Klein Lankhorst R, Rose M, Hauf J, K\u00f6tter P, Berneiser S, Hempel S, Feldpausch M, Lamberth S, Van den Daele H, De Keyser A, Buysshaert C, Gielen J, Villarroel R, De Clercq R, Van Montagu M, Rogers J, Cronin A, Quail M, Bray-Allen S, 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Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9ZQZ4", "url": "https://www.uniprot.org/uniprotkb/Q9ZQZ4" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT4G03370", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT4G03370", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 3, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q9ZQZ4", "url": "https://www.uniprot.org/uniprotkb/Q9ZQZ4" } ], "pmid": "" }, { "name": "nucleoplasm", "id": "GO:0005654", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005654", "evidence": [ { "database": "UniProtKB", "id": "Q9ZQZ4", "url": 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"Q9ZR09", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9ZR09" } ] } ], "protein_names": [ { "name": "Putative F-box/FBD/LRR-repeat protein At4g03220", "type": "recommended", "evidence": [ { "id": "Q9ZR09", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9ZR09/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9ZR09", "url": "https://www.uniprot.org/uniprotkb/Q9ZR09" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9ZR09", "locus": {} } ], "crossref": [ { "id": "Q9ZR09", "url": "https://alphafold.ebi.ac.uk/entry/Q9ZR09", "database": "AlphaFoldDB", "categories": [] }, { "id": "AT4G03220", "url": "https://bar.utoronto.ca/thalemine/portal.do?externalids=AT4G03220", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "828021", "url": "https://www.ncbi.nlm.nih.gov/gene/828021", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR001810", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001810", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR006566", "url": "https://www.ebi.ac.uk/interpro/entry/IPR006566", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036047", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036047", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR050232", "url": "https://www.ebi.ac.uk/interpro/entry/IPR050232", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT4G03220", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT4G03220", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "KIRSQMM", "url": "https://omabrowser.org/oma/group/KIRSQMM/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR31900", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31900", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR31900:SF27", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31900:SF27", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00646", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00646", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF08387", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF08387", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PR:Q9ZR09", "url": "https://proconsortium.org/cgi-bin/entry_pro?id=PR:Q9ZR09", "database": "PRO", "categories": [ "Protein" ] }, { "id": "AT4G03220", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT4G03220", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9ZR09", "url": "https://www.uniprot.org/uniprotkb/Q9ZR09", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9ZR09-1", "url": "https://www.uniprot.org/uniprotkb/Q9ZR09-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "METRSVKRKKKKKEEEANWFIRVDRISNLPDSLNHQILLLLPLKSAAQASLLSKRWRSLFLSLPDLDFTSINDLKNPKSFSSNSIYKVLSLRSHRDSNNLRSLRFRVPVTFTSLNSLIRLAVTHQVQDLDIEVTTKDYFNFPRWIVTSQNLRALTLKSANLGFRLPPSSSARGGFQKLTSLSLSRVILHNQPCLSDFFTDPSFPLLEKLTLECCFGLKELKVSCRLLQEFSLKNSLQLEGLEVSGNKLQKLKVESCFYSYSEKSFVKINTPNLKTFLWNSNAVTTSVHFLDKLVCLRKAFVKVFWHHQDLNSQIQSLFTLLSGLCHSYKLQLGNQSVEILSSKKGLLKNHLLPFHNMRFLELQTRLNRHNVQTLSCLFKSCPMLNILTVKIIDDQTSERRQWNKDLWDMSNSEIQYWESQAYELESFLNHLEFVEIHGFVECENEMSLAIFLLRHGKALIKMTLRSSFLCRDSLRRQMIRSQLTGFSMASSKAKISFH", "length": 498, "header": "sp|Q9ZR09-1|FDL25_ARATH Isoform 1 of Putative F-box/FBD/LRR-repeat protein At4g03220 OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9ZR09-1" }, "isoforms": [ { "isoform_ac": "Q9ZR09-1", "url": "https://www.uniprot.org/uniprotkb/Q9ZR09/entry#Q9ZR09-1", "sequence": { "sequence": "METRSVKRKKKKKEEEANWFIRVDRISNLPDSLNHQILLLLPLKSAAQASLLSKRWRSLFLSLPDLDFTSINDLKNPKSFSSNSIYKVLSLRSHRDSNNLRSLRFRVPVTFTSLNSLIRLAVTHQVQDLDIEVTTKDYFNFPRWIVTSQNLRALTLKSANLGFRLPPSSSARGGFQKLTSLSLSRVILHNQPCLSDFFTDPSFPLLEKLTLECCFGLKELKVSCRLLQEFSLKNSLQLEGLEVSGNKLQKLKVESCFYSYSEKSFVKINTPNLKTFLWNSNAVTTSVHFLDKLVCLRKAFVKVFWHHQDLNSQIQSLFTLLSGLCHSYKLQLGNQSVEILSSKKGLLKNHLLPFHNMRFLELQTRLNRHNVQTLSCLFKSCPMLNILTVKIIDDQTSERRQWNKDLWDMSNSEIQYWESQAYELESFLNHLEFVEIHGFVECENEMSLAIFLLRHGKALIKMTLRSSFLCRDSLRRQMIRSQLTGFSMASSKAKISFH", "length": 498, "header": "sp|Q9ZR09-1|FDL25_ARATH Isoform 1 of Putative F-box/FBD/LRR-repeat protein At4g03220 OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9ZR09-1" }, "locus": { "chromosome": "4", "start_pos": 1417472, "end_pos": 1419148, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT4G03220.1", "url": "https://www.ensemblgenomes.org/id/AT4G03220.1" }, { "database": "Ensembl Peptide", "id": "AT4G03220.1", "url": "https://www.ensemblgenomes.org/id/AT4G03220.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "1999", "authors": "Mayer K, Sch\u00fcller C, Wambutt R, Murphy G, Volckaert G, Pohl T, D\u00fcsterh\u00f6ft A, Stiekema W, Entian K D, Terryn N, Harris B, Ansorge W, Brandt P, Grivell L, Rieger M, Weichselgartner M, de Simone V, Obermaier B, Mache R, M\u00fcller M, Kreis M, Delseny M, Puigdomenech P, Watson M, Schmidtheini T, Reichert B, Portatelle D, Perez-Alonso M, Boutry M, Bancroft I, Vos P, Hoheisel J, Zimmermann W, Wedler H, Ridley P, Langham S A, McCullagh B, Bilham L, Robben J, Van der Schueren J, 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Entian K D, Terryn N, Harris B, Ansorge W, Brandt P, Grivell L, Rieger M, Weichselgartner M, de Simone V, Obermaier B, Mache R, M\u00fcller M, Kreis M, Delseny M, Puigdomenech P, Watson M, Schmidtheini T, Reichert B, Portatelle D, Perez-Alonso M, Boutry M, Bancroft I, Vos P, Hoheisel J, Zimmermann W, Wedler H, Ridley P, Langham S A, McCullagh B, Bilham L, Robben J, Van der Schueren J, Grymonprez B, Chuang Y J, Vandenbussche F, Braeken M, Weltjens I, Voet M, Bastiaens I, Aert R, Defoor E, Weitzenegger T, Bothe G, Ramsperger U, Hilbert H, Braun M, Holzer E, Brandt A, Peters S, van Staveren M, Dirske W, Mooijman P, Klein Lankhorst R, Rose M, Hauf J, K\u00f6tter P, Berneiser S, Hempel S, Feldpausch M, Lamberth S, Van den Daele H, De Keyser A, Buysshaert C, Gielen J, Villarroel R, De Clercq R, Van Montagu M, Rogers J, Cronin A, Quail M, Bray-Allen S, Clark L, Doggett J, Hall S, Kay M, Lennard N, McLay K, Mayes R, Pettett A, Rajandream M A, Lyne M, Benes V, Rechmann S, Borkova D, Bl\u00f6cker H, Scharfe M, Grimm M, L\u00f6hnert T H, Dose S, de Haan M, Maarse A, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Fartmann B, Granderath K, Dauner D, Herzl A, Neumann S, Argiriou A, Vitale D, Liguori R, Piravandi E, Massenet O, Quigley F, Clabauld G, M\u00fcndlein A, Felber R, Schnabl S, Hiller R, Schmidt W, Lecharny A, Aubourg S, Chefdor F, Cooke R, Berger C, Montfort A, Casacuberta E, Gibbons T, Weber N, Vandenbol M, Bargues M, Terol J, Torres A, Perez-Perez A, Purnelle B, Bent E, Johnson S, Tacon D, Jesse T, Heijnen L, Schwarz S, Scholler P, Heber S, Francs P, Bielke C, Frishman D, Haase D, Lemcke K, Mewes H W, Stocker S, Zaccaria P, Bevan M, Wilson R K, de la Bastide M, Habermann K, Parnell L, Dedhia N, Gnoj L, Schutz K, Huang E, Spiegel L, Sehkon M, Murray J, Sheet P, Cordes M, Abu-Threideh J, Stoneking T, Kalicki J, Graves T, Harmon G, Edwards J, Latreille P, Courtney L, Cloud J, Abbott A, Scott K, Johnson D, Minx P, Bentley D, Fulton B, Miller N, Greco T, Kemp K, Kramer J, Fulton L, Mardis E, Dante M, Pepin K, Hillier L, Nelson J, Spieth J, Ryan E, Andrews S, Geisel C, Layman D, Du H, Ali J, Berghoff A, Jones K, Drone K, Cotton M, Joshu C, Antonoiu B, Zidanic M, Strong C, Sun H, Lamar B, Yordan C, Ma P, Zhong J, Preston R, Vil D, Shekher M, Matero A, Shah R, Swaby I K, O'Shaughnessy A, Rodriguez M, Hoffmann J, Till S, Granat S, Shohdy N, Hasegawa A, Hameed A, Lodhi M, Johnson A, Chen E, Marra M, Martienssen R, McCombie W R", "evidence": [ { "database": "UniProtKB", "id": "Q9ZS96", "url": "https://www.uniprot.org/uniprotkb/Q9ZS96" } ], "reference": [ { "type": "PubMed", "id": "10617198", "url": "https://glygen.org/publication/PubMed/10617198" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": 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"strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT4G10560.1", "url": "https://www.ensemblgenomes.org/id/AT4G10560.1" }, { "database": "Ensembl Peptide", "id": "AT4G10560.1", "url": "https://www.ensemblgenomes.org/id/AT4G10560.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "1999", "authors": "Mayer K, Sch\u00fcller C, Wambutt R, Murphy G, Volckaert G, Pohl T, D\u00fcsterh\u00f6ft A, Stiekema W, Entian K D, Terryn N, Harris B, Ansorge W, Brandt P, Grivell L, Rieger M, Weichselgartner M, de Simone V, Obermaier B, Mache R, M\u00fcller M, Kreis M, Delseny M, Puigdomenech P, Watson M, Schmidtheini T, Reichert B, Portatelle D, Perez-Alonso M, Boutry M, Bancroft I, Vos P, Hoheisel J, Zimmermann W, Wedler H, Ridley P, Langham S A, McCullagh B, Bilham L, Robben J, Van der Schueren J, Grymonprez B, Chuang Y J, Vandenbussche F, Braeken M, Weltjens I, Voet M, Bastiaens I, Aert R, Defoor E, Weitzenegger T, Bothe G, Ramsperger U, Hilbert H, Braun M, Holzer E, Brandt A, Peters S, van Staveren M, Dirske W, Mooijman P, Klein Lankhorst R, Rose M, Hauf J, K\u00f6tter P, Berneiser S, Hempel S, Feldpausch M, Lamberth S, Van den Daele H, De Keyser A, Buysshaert C, Gielen J, Villarroel R, De Clercq R, Van Montagu M, Rogers J, Cronin A, Quail M, Bray-Allen S, Clark L, Doggett J, Hall S, Kay M, Lennard N, McLay K, Mayes R, Pettett A, Rajandream M A, Lyne M, Benes V, Rechmann S, Borkova D, Bl\u00f6cker H, Scharfe M, Grimm M, L\u00f6hnert T H, Dose S, de Haan M, Maarse A, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Fartmann B, Granderath K, Dauner D, Herzl A, Neumann S, Argiriou A, Vitale D, Liguori R, Piravandi E, Massenet O, Quigley F, Clabauld G, M\u00fcndlein A, Felber R, Schnabl S, Hiller R, Schmidt W, Lecharny A, Aubourg S, Chefdor F, Cooke R, Berger C, Montfort A, Casacuberta E, 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"MLSKAARELSSSKLKPLFALHLSSFKSSIPTKPNPSPPSYLNPHHFNNISKPPFLRFYSSSSSSNLLPLNRDGNYNDTTSITISVCPGCGVHMQNSNPKHPGFFIKPSTEKQRNDLNLRDLTPISQEPEFIDSIKRGFIIEPISSSDLNPRDDEPSDSRPLVCARCHSLRHYGRVKDPTVENLLPDFDFDHTVGRRLGSASGARTVVLMVVDASDFDGSFPKRVAKLVSRTIDENNMAWKEGKSGNVPRVVVVVTKIDLLPSSLSPNRFEQWVRLRAREGGLSKITKLHFVSPVKNWGIKDLVEDVAAMAGKRGHVWAVGSQNAGKSTLINAVGKVVGGKVWHLTEAPVPGTTLGIIRIEGVLPFEAKLFDTPGLLNPHQITTRLTREEQRLVHISKELKPRTYRIKEGYTVHIGGLMRLDIDEASVDSLYVTVWASPYVPLHMGKKENAYKTLEDHFGCRLQPPIGEKRVEELGKWVRKEFRVSGTSWDTSSVDIAVSGLGWFALGLKGDAILGVWTHEGIDVFCRDSLLPQRAHTFEDSGFTVSKIVAKADRNFNQIHKEETQKKRKPNKSFSDSVSDRDNSREVSQPSDILPTM", "length": 597, "header": "tr|Q9ZSB8-1|Q9ZSB8_ARATH Isoform 1 of P-loop containing nucleoside triphosphate hydrolases superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9ZSB8-1" }, "isoforms": [ { "isoform_ac": "Q9ZSB8-1", "url": "https://www.uniprot.org/uniprotkb/Q9ZSB8/entry", "sequence": { "sequence": "MLSKAARELSSSKLKPLFALHLSSFKSSIPTKPNPSPPSYLNPHHFNNISKPPFLRFYSSSSSSNLLPLNRDGNYNDTTSITISVCPGCGVHMQNSNPKHPGFFIKPSTEKQRNDLNLRDLTPISQEPEFIDSIKRGFIIEPISSSDLNPRDDEPSDSRPLVCARCHSLRHYGRVKDPTVENLLPDFDFDHTVGRRLGSASGARTVVLMVVDASDFDGSFPKRVAKLVSRTIDENNMAWKEGKSGNVPRVVVVVTKIDLLPSSLSPNRFEQWVRLRAREGGLSKITKLHFVSPVKNWGIKDLVEDVAAMAGKRGHVWAVGSQNAGKSTLINAVGKVVGGKVWHLTEAPVPGTTLGIIRIEGVLPFEAKLFDTPGLLNPHQITTRLTREEQRLVHISKELKPRTYRIKEGYTVHIGGLMRLDIDEASVDSLYVTVWASPYVPLHMGKKENAYKTLEDHFGCRLQPPIGEKRVEELGKWVRKEFRVSGTSWDTSSVDIAVSGLGWFALGLKGDAILGVWTHEGIDVFCRDSLLPQRAHTFEDSGFTVSKIVAKADRNFNQIHKEETQKKRKPNKSFSDSVSDRDNSREVSQPSDILPTM", "length": 597, "header": "tr|Q9ZSB8-1|Q9ZSB8_ARATH Isoform 1 of P-loop containing nucleoside triphosphate hydrolases superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9ZSB8-1" }, "locus": { "chromosome": "4", "start_pos": 6564183, "end_pos": 6566504, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT4G10620.1", "url": "https://www.ensemblgenomes.org/id/AT4G10620.1" }, { "database": "Ensembl Peptide", "id": "AT4G10620.1", "url": "https://www.ensemblgenomes.org/id/AT4G10620.1" } ] } } ], "glycosylation": [], "phosphorylation": [ { "start_pos": 575, "end_pos": 575, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9ZSB8", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9ZSB8" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ], "site_lbl": "Ser575" } ], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "1999", "authors": "Mayer K, Sch\u00fcller C, Wambutt R, Murphy G, Volckaert G, Pohl T, D\u00fcsterh\u00f6ft A, Stiekema W, Entian K D, Terryn N, Harris B, Ansorge W, Brandt P, Grivell L, Rieger M, Weichselgartner M, de Simone V, Obermaier B, Mache R, M\u00fcller M, Kreis M, Delseny M, Puigdomenech P, Watson M, Schmidtheini T, Reichert B, Portatelle D, Perez-Alonso M, Boutry M, Bancroft I, Vos P, Hoheisel J, Zimmermann W, Wedler H, Ridley P, Langham S A, McCullagh B, Bilham L, Robben J, Van der Schueren J, Grymonprez B, Chuang Y J, Vandenbussche F, Braeken M, Weltjens I, Voet M, Bastiaens I, Aert R, Defoor E, Weitzenegger T, Bothe G, Ramsperger U, Hilbert H, Braun M, Holzer E, Brandt A, Peters S, van Staveren M, Dirske W, Mooijman P, Klein Lankhorst R, Rose M, Hauf J, K\u00f6tter P, Berneiser S, Hempel S, Feldpausch M, Lamberth S, Van den Daele H, De Keyser A, Buysshaert C, Gielen J, Villarroel R, De Clercq R, Van Montagu M, Rogers J, Cronin A, Quail M, Bray-Allen S, Clark L, Doggett J, Hall S, Kay M, Lennard N, McLay K, Mayes R, Pettett A, Rajandream M A, Lyne M, Benes V, Rechmann S, Borkova D, Bl\u00f6cker H, Scharfe M, Grimm M, L\u00f6hnert T H, Dose S, de Haan M, Maarse A, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Fartmann B, Granderath K, Dauner D, Herzl A, Neumann S, Argiriou A, Vitale D, Liguori R, Piravandi E, Massenet O, Quigley F, Clabauld G, M\u00fcndlein A, Felber R, Schnabl S, Hiller R, Schmidt W, Lecharny A, Aubourg S, Chefdor F, Cooke R, Berger C, Montfort A, Casacuberta E, Gibbons T, Weber N, Vandenbol M, Bargues M, Terol J, Torres A, Perez-Perez A, Purnelle B, Bent E, Johnson S, Tacon D, Jesse T, Heijnen L, Schwarz S, Scholler P, Heber S, Francs P, Bielke C, Frishman D, Haase D, Lemcke K, Mewes H W, Stocker S, Zaccaria P, Bevan M, Wilson R K, de la Bastide M, Habermann K, Parnell L, Dedhia N, Gnoj L, Schutz K, Huang E, Spiegel L, Sehkon M, Murray J, Sheet P, Cordes M, Abu-Threideh J, Stoneking T, Kalicki J, Graves T, Harmon G, Edwards J, Latreille P, Courtney L, Cloud J, Abbott A, Scott K, Johnson D, Minx P, Bentley D, Fulton B, Miller N, Greco T, Kemp K, Kramer J, Fulton L, Mardis E, Dante M, Pepin K, Hillier L, Nelson J, Spieth J, Ryan E, Andrews S, Geisel C, Layman D, Du H, Ali J, Berghoff A, Jones K, Drone K, Cotton M, Joshu C, Antonoiu B, Zidanic M, Strong C, Sun H, Lamar B, Yordan C, Ma P, Zhong J, Preston R, Vil D, Shekher M, Matero A, Shah R, Swaby I K, O'Shaughnessy A, Rodriguez M, Hoffmann J, Till S, Granat S, Shohdy N, Hasegawa A, Hameed A, Lodhi M, Johnson A, Chen E, Marra M, Martienssen R, McCombie W R", "evidence": [ { "database": "UniProtKB", "id": "Q9ZSB8", "url": "https://www.uniprot.org/uniprotkb/Q9ZSB8" } ], "reference": [ { "type": "PubMed", "id": "10617198", "url": "https://glygen.org/publication/PubMed/10617198" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9ZSB8", "url": "https://www.uniprot.org/uniprotkb/Q9ZSB8" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] }, { "title": "Capturing the phosphorylation and protein interaction landscape of the plant TOR kinase.", "journal": "Nature plants", "date": "2019-03", "authors": "Van Leene Jelle, Han Chao, Gadeyne Astrid, Eeckhout Dominique, Matthijs Caroline, Cannoot Bernard, De Winne Nancy, Persiau Geert, Van De Slijke Eveline, Van de Cotte Brigitte, Stes Elisabeth, Van Bel Michiel, Storme Veronique, Impens Francis, Gevaert Kris, Vandepoele Klaas, De Smet Ive, De Jaeger Geert", "evidence": [ { "database": "iPTMnet", "id": "Q9ZSB8", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9ZSB8" } ], "reference": [ { "type": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ] } ], "pathway": [ { "id": "ath:AT4G10620", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT4G10620", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "Q8W4I6-1", "protein_name": "GTP-binding protein BRASSINAZOLE INSENSITIVE PALE GREEN 2, chloroplastic", "gene_name": "BPG2", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MVVLISSTVTICNVKPKLEDGNFRVSRLIHRPEVPFFSGLSNEKKKKCAVSVMCLAVKKEQVVQSVESVNGTIFPKKSKNLIMSEGRDEDEDYGKIICPGCGIFMQDNDPDLPGYYQKRKVIANNLEGDEHVENDELAGFEMVDDDADEEEEGEDDEMDDEIKNAIEGSNSESESGFEWESDEWEEKKEVNDVELDGFAPAGVGYGNVTEEKEKKKRVSKTERKKIAREEAKKDNYDDVTVCARCHSLRNYGQVKNQAAENLLPDFDFDRLISTRLIKPMSNSSTTVVVMVVDCVDFDGSFPKRAAKSLFQVLQKAENDPKGSKNLPKLVLVATKVDLLPTQISPARLDRWVRHRAKAGGAPKLSGVYMVSARKDIGVKNLLAYIKELAGPRGNVWVIGAQNAGKSTLINALSKKDGAKVTRLTEAPVPGTTLGILKIGGILSAKAKMYDTPGLLHPYLMSLRLNSEERKMVEIRKEVQPRSYRVKAGQSVHIGGLVRLDLVSASVETIYITIWASHSVSLHLGKTENAEEIFKGHSGLRLQPPIGENRASELGTWEEKEIQVSGNSWDVKSIDISVAGLGWLSLGLKGAATLALWTYQGIDVTLREPLVIDRAPYLERPGFWLPKAITEVLGTHSSKLVDARRRKKQQDSTDFLSDSVA", "length": 660 }, "evidence": [ { "id": "Q9ZSB8", "url": "https://omabrowser.org/oma/group/Q9ZSB8/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" } ], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "GTP binding", "id": "GO:0005525", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005525", "evidence": [ { "database": "UniProtKB", "id": "Q9ZSB8", "url": "https://www.uniprot.org/uniprotkb/Q9ZSB8" } ], "pmid": "" }, { "name": "hydrolase activity", "id": "GO:0016787", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016787", "evidence": [ { "database": "UniProtKB", "id": "Q9ZSB8", "url": "https://www.uniprot.org/uniprotkb/Q9ZSB8" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q9ZSB8", "url": "https://www.uniprot.org/uniprotkb/Q9ZSB8" } ], "pmid": "" }, { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "Q9ZSB8", "url": "https://www.uniprot.org/uniprotkb/Q9ZSB8" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 48, "end_pos": 50, "annotation": "n_glycosylation_sequon" }, { "start_pos": 571, "end_pos": 573, "annotation": "n_glycosylation_sequon" }, { "start_pos": 76, "end_pos": 78, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "Q9ZSB8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9ZSB8" }, { "id": "PF01926", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF01926" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "G", "eco_id": "ECO_0000259", "start_pos": 316, "end_pos": 388, "start_aa": "Val", "end_aa": "Glu", "glycosite_overlap": [] }, { "evidence": [ { "id": "Q9ZSB8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9ZSB8" }, { "id": "PF21516", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF21516" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "NOA1/YqeH-like C-terminal", "eco_id": "ECO_0000259", "start_pos": 432, "end_pos": 530, "start_aa": "Val", "end_aa": "Leu", "glycosite_overlap": [] } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [ 575 ], "sequon_annotation_sites": [ { "start_pos": 48, "end_pos": 50 }, { "start_pos": 571, "end_pos": 573 }, { "start_pos": 76, "end_pos": 78 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", 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0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 } ], "sort_fields": [ "start_pos", "end_pos", "kinase_uniprot_canonical_ac", "kinase_gene_name", "residue", "comment", "site_lbl" ] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 3 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "Q9ZSB9-1", "uniprot_ac": "Q9ZSB9", "uniprot_id": "Q9ZSB9_ARATH", "mass": { "chemical_mass": 36586.0, "monoisotopic_mass": 36586.0 }, "refseq": { "ac": "NP_192801", "name": "Glutaredoxin family protein", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_192801" }, "gene_names": [ { "name": "T4F9.90", "type": "synonym", "evidence": [ { "id": "NP_192801", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_192801" }, { "id": "Q9ZSB9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9ZSB9" } ] }, { "name": "T4F9_90", "type": "synonym", "evidence": [ { "id": "NP_192801", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_192801" }, { "id": "Q9ZSB9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9ZSB9" } ] } ], "protein_names": [ { "name": "Glutaredoxin family protein", "type": "synonym", "evidence": [ { "id": "NP_192801", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_192801" }, { "id": "Q9ZSB9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9ZSB9/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9ZSB9", "url": "https://www.uniprot.org/uniprotkb/Q9ZSB9" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9ZSB9", "locus": {} } ], "crossref": [ { "id": "AT4G10630", "url": "https://bar.utoronto.ca/thalemine/portal.do?externalids=AT4G10630", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "cd03031", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd03031", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "826655", "url": "https://www.ncbi.nlm.nih.gov/gene/826655", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR002109", "url": "https://www.ebi.ac.uk/interpro/entry/IPR002109", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036249", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036249", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT4G10630", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT4G10630", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "EIINSWE", "url": "https://omabrowser.org/oma/group/EIINSWE/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR45669", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR45669", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR45669:SF31", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR45669:SF31", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00462", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00462", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF23733", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF23733", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_192801", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_192801", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "AT4G10630", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT4G10630", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9ZSB9", "url": "https://www.uniprot.org/uniprotkb/Q9ZSB9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9ZSB9-1", "url": "https://www.uniprot.org/uniprotkb/Q9ZSB9-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MGCVSSNLLNHDEDFSQIGGGSSAFGHHIVKLTSTTYGLLTLDPPPPPSPPMTPPEKFTVDTKSKSIWSEPRVIKSEPEIINSWELMSGLDGESFRFTPLPKTPVKYKVFGGENKENSDPSRRNPRKNLNDEVLKPLDLNREDSDSNSRSPRKSFKPLDLKLDEKFERICPPGGENRVVMYTTSLRGVRQTFEACNAVRAAVESFGVVVCERDVSMDRRFREELVSLMAKRVGDEGVAALPPRVFVKGRYIGGGEEVLRLVEEGSFGELISGIPRKKAGGCESGACDGCGGLFFLPCFRCNGSCKMVKGWGSASVVVRCNECNENGLVPCPICS", "length": 334, "header": "tr|Q9ZSB9-1|Q9ZSB9_ARATH Isoform 1 of Glutaredoxin family protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9ZSB9-1" }, "isoforms": [ { "isoform_ac": "Q9ZSB9-1", "url": "https://www.uniprot.org/uniprotkb/Q9ZSB9/entry", "sequence": { "sequence": "MGCVSSNLLNHDEDFSQIGGGSSAFGHHIVKLTSTTYGLLTLDPPPPPSPPMTPPEKFTVDTKSKSIWSEPRVIKSEPEIINSWELMSGLDGESFRFTPLPKTPVKYKVFGGENKENSDPSRRNPRKNLNDEVLKPLDLNREDSDSNSRSPRKSFKPLDLKLDEKFERICPPGGENRVVMYTTSLRGVRQTFEACNAVRAAVESFGVVVCERDVSMDRRFREELVSLMAKRVGDEGVAALPPRVFVKGRYIGGGEEVLRLVEEGSFGELISGIPRKKAGGCESGACDGCGGLFFLPCFRCNGSCKMVKGWGSASVVVRCNECNENGLVPCPICS", "length": 334, "header": "tr|Q9ZSB9-1|Q9ZSB9_ARATH Isoform 1 of Glutaredoxin family protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9ZSB9-1" }, "locus": { "chromosome": "4", "start_pos": 6566625, "end_pos": 6567740, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT4G10630.1", "url": "https://www.ensemblgenomes.org/id/AT4G10630.1" }, { "database": "Ensembl Peptide", "id": "AT4G10630.1", "url": "https://www.ensemblgenomes.org/id/AT4G10630.1" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "other", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 53, "start_aa": "Thr", "end_pos": 53, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr53", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ], "filter_code": "000000000000000010000.00000000001000.0.01000" } ], "phosphorylation": [ { "start_pos": 103, "end_pos": 103, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Thr", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9ZSB9", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9ZSB9" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ], "site_lbl": "Thr103" } ], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "1999", "authors": "Mayer K, Sch\u00fcller C, Wambutt R, Murphy G, Volckaert G, Pohl T, D\u00fcsterh\u00f6ft A, Stiekema W, Entian K D, Terryn N, Harris B, Ansorge W, Brandt P, Grivell L, Rieger M, Weichselgartner M, de Simone V, Obermaier B, Mache R, M\u00fcller M, Kreis M, Delseny M, Puigdomenech P, Watson M, Schmidtheini T, Reichert B, Portatelle D, Perez-Alonso M, Boutry M, Bancroft I, Vos P, Hoheisel J, Zimmermann W, Wedler H, Ridley P, Langham S A, McCullagh B, Bilham L, Robben J, Van der Schueren J, Grymonprez B, Chuang Y J, Vandenbussche F, Braeken M, Weltjens I, Voet M, Bastiaens I, Aert R, Defoor E, Weitzenegger T, Bothe G, Ramsperger U, Hilbert H, Braun M, Holzer E, Brandt A, Peters S, van Staveren M, Dirske W, Mooijman P, Klein Lankhorst R, Rose M, Hauf J, K\u00f6tter P, Berneiser S, Hempel S, Feldpausch M, Lamberth S, Van den Daele H, De Keyser A, Buysshaert C, Gielen J, Villarroel R, De Clercq R, Van Montagu M, Rogers J, Cronin A, Quail M, Bray-Allen S, Clark L, Doggett J, Hall S, Kay M, Lennard N, McLay K, Mayes R, Pettett A, Rajandream M A, Lyne M, Benes V, Rechmann S, Borkova D, Bl\u00f6cker H, Scharfe M, Grimm M, L\u00f6hnert T H, Dose S, de Haan M, Maarse A, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Fartmann B, Granderath K, Dauner D, Herzl A, Neumann S, Argiriou A, Vitale D, Liguori R, Piravandi E, Massenet O, Quigley F, Clabauld G, M\u00fcndlein A, Felber R, Schnabl S, Hiller R, Schmidt W, Lecharny A, Aubourg S, Chefdor F, Cooke R, Berger C, Montfort A, Casacuberta E, Gibbons T, Weber N, Vandenbol M, Bargues M, Terol J, Torres A, Perez-Perez A, Purnelle B, Bent E, Johnson S, Tacon D, Jesse T, Heijnen L, Schwarz S, Scholler P, Heber S, Francs P, Bielke C, Frishman D, Haase D, Lemcke K, Mewes H W, Stocker S, Zaccaria P, Bevan M, Wilson R K, de la Bastide M, Habermann K, Parnell L, Dedhia N, Gnoj L, Schutz K, Huang E, Spiegel L, Sehkon M, Murray J, Sheet P, Cordes M, Abu-Threideh J, Stoneking T, Kalicki J, Graves T, Harmon G, Edwards J, Latreille P, Courtney L, Cloud J, Abbott A, Scott K, Johnson D, Minx P, Bentley D, Fulton B, Miller N, Greco T, Kemp K, Kramer J, Fulton L, Mardis E, Dante M, Pepin K, Hillier L, Nelson J, Spieth J, Ryan E, Andrews S, Geisel C, Layman D, Du H, Ali J, Berghoff A, Jones K, Drone K, Cotton M, Joshu C, Antonoiu B, Zidanic M, Strong C, Sun H, Lamar B, Yordan C, Ma P, Zhong J, Preston R, Vil D, Shekher M, Matero A, Shah R, Swaby I K, O'Shaughnessy A, Rodriguez M, Hoffmann J, Till S, Granat S, Shohdy N, Hasegawa A, Hameed A, Lodhi M, Johnson A, Chen E, Marra M, Martienssen R, McCombie W R", "evidence": [ { "database": "UniProtKB", "id": "Q9ZSB9", "url": "https://www.uniprot.org/uniprotkb/Q9ZSB9" } ], "reference": [ { "type": "PubMed", "id": "10617198", "url": "https://glygen.org/publication/PubMed/10617198" } ] }, { "title": "Quantitative phosphoproteomics of the ataxia telangiectasia-mutated (ATM) and ataxia telangiectasia-mutated and rad3-related (ATR) dependent DNA damage response in Arabidopsis thaliana.", "journal": "Molecular & cellular proteomics : MCP", "date": "2015-03", "authors": "Roitinger Elisabeth, Hofer Manuel, K\u00f6cher Thomas, Pichler Peter, Novatchkova Maria, Yang Jianhua, Schl\u00f6gelhofer Peter, Mechtler Karl", "evidence": [ { "database": "iPTMnet", "id": "Q9ZSB9", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9ZSB9" } ], "reference": [ { "type": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9ZSB9", "url": "https://www.uniprot.org/uniprotkb/Q9ZSB9" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT4G10630", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT4G10630", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "Q9ZSB9", "url": "https://www.uniprot.org/uniprotkb/Q9ZSB9" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 301, "end_pos": 303, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "Q9ZSB9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9ZSB9" }, { "id": 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{ "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 1 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 1 }, { "field": "exact_o_linked_sites", "count": 1 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 } ], "sort_fields": [ "start_pos", "end_pos", "kinase_uniprot_canonical_ac", "kinase_gene_name", "residue", "comment", "site_lbl" ] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 3 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ], "tool_support": { "graph_view": "yes" } }, { "uniprot_canonical_ac": "Q9ZSI9-1", "uniprot_ac": "Q9ZSI9", "uniprot_id": "Q9ZSI9_ARATH", "mass": { "chemical_mass": 74610.0, "monoisotopic_mass": 74610.0 }, "refseq": {}, "gene_names": [ { "name": "T15B16.10", "type": "synonym", "evidence": [ { "id": "Q9ZSI9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9ZSI9" } ] }, { "name": "T15B16_10", "type": "synonym", "evidence": [ { "id": "Q9ZSI9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9ZSI9" } ] } ], "protein_names": [ { "name": "Cysteine/Histidine-rich C1 domain family protein", "type": "synonym", "evidence": [ { "id": "Q9ZSI9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9ZSI9/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9ZSI9", "url": "https://www.uniprot.org/uniprotkb/Q9ZSI9" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/Q9ZSI9", "locus": {} } ], "crossref": [ { "id": "AT4G01740", "url": "https://bar.utoronto.ca/thalemine/portal.do?externalids=AT4G01740", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "828012", "url": "https://www.ncbi.nlm.nih.gov/gene/828012", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR004146", "url": "https://www.ebi.ac.uk/interpro/entry/IPR004146", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR046349", "url": "https://www.ebi.ac.uk/interpro/entry/IPR046349", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR053192", "url": "https://www.ebi.ac.uk/interpro/entry/IPR053192", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR054483", "url": "https://www.ebi.ac.uk/interpro/entry/IPR054483", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT4G01740", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT4G01740", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "MCAKITD", "url": "https://omabrowser.org/oma/group/MCAKITD/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR32410", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR32410", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR32410:SF154", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR32410:SF154", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF03107", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF03107", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF22926", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF22926", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "AT4G01740", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT4G01740", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9ZSI9", "url": "https://www.uniprot.org/uniprotkb/Q9ZSI9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9ZSI9-1", "url": "https://www.uniprot.org/uniprotkb/Q9ZSI9-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MDSEGVLMPLIHKHRMMPWNDLRRGDCCGRFESICDGYYCKICDIFVHKKCGESSEYIEHPSHPNHTLQLLSTRGNSHDCDLCGKNIGDLFYRCEICDFDMDLYCAKYPPPEVINISKTHHHKLNLLKELIQFDYCVWHPPEVNHTLEVNHSYHSLHPLKLHTGQLPNYSDRKCRLCAKEIEVGLFYHCSLCNFTLDMSCVLNPPQRYLWNLKAHDHQLTLLPSLRSFLCSACGLNGDRSPYICVQCDFMIHQVCLHLPRVININRHDHRVSRTSVLGVVNSVCGVCRQKVDWTCGGFSCPRCPGYAAHSLCATREDVWNGKELEGVPEEIEDIEPYVVIDDNTIQHFSHKEHYLRLHVNSVLCDDNKRCSACTHPICLQSFYGCMDCDFILHQNCAGFLRMKWHVLHNERLTLVTNETEVFKCYACERWSNGFRYQQGYKSFDVRCGSISEPFFHPSHPDHPLYCILPYGKIFCNGCYKFKYGMLVCVEYECNHLICFNCATLPPVVKHRVDDHPLSLCYGEKASGICWCDICEAKADPEIWFYTCKDQRASLHTSCVLGDFSGLMPGSTLKSASNSSEVLLNNIVSRPFCSFLELMPGSTLESAGKSVEVGLNKSTSRPFCISCKLHCIFPIILKRLGTSDEYFCSILCI", "length": 652, "header": "tr|Q9ZSI9-1|Q9ZSI9_ARATH Isoform 1 of Cysteine/Histidine-rich C1 domain family protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9ZSI9-1" }, "isoforms": [ { "isoform_ac": "Q9ZSI9-1", "url": "https://www.uniprot.org/uniprotkb/Q9ZSI9/entry", "sequence": { "sequence": "MDSEGVLMPLIHKHRMMPWNDLRRGDCCGRFESICDGYYCKICDIFVHKKCGESSEYIEHPSHPNHTLQLLSTRGNSHDCDLCGKNIGDLFYRCEICDFDMDLYCAKYPPPEVINISKTHHHKLNLLKELIQFDYCVWHPPEVNHTLEVNHSYHSLHPLKLHTGQLPNYSDRKCRLCAKEIEVGLFYHCSLCNFTLDMSCVLNPPQRYLWNLKAHDHQLTLLPSLRSFLCSACGLNGDRSPYICVQCDFMIHQVCLHLPRVININRHDHRVSRTSVLGVVNSVCGVCRQKVDWTCGGFSCPRCPGYAAHSLCATREDVWNGKELEGVPEEIEDIEPYVVIDDNTIQHFSHKEHYLRLHVNSVLCDDNKRCSACTHPICLQSFYGCMDCDFILHQNCAGFLRMKWHVLHNERLTLVTNETEVFKCYACERWSNGFRYQQGYKSFDVRCGSISEPFFHPSHPDHPLYCILPYGKIFCNGCYKFKYGMLVCVEYECNHLICFNCATLPPVVKHRVDDHPLSLCYGEKASGICWCDICEAKADPEIWFYTCKDQRASLHTSCVLGDFSGLMPGSTLKSASNSSEVLLNNIVSRPFCSFLELMPGSTLESAGKSVEVGLNKSTSRPFCISCKLHCIFPIILKRLGTSDEYFCSILCI", "length": 652, "header": "tr|Q9ZSI9-1|Q9ZSI9_ARATH Isoform 1 of Cysteine/Histidine-rich C1 domain family protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9ZSI9-1" }, "locus": { "chromosome": "4", "start_pos": 753422, "end_pos": 755456, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT4G01740.1", "url": "https://www.ensemblgenomes.org/id/AT4G01740.1" }, { "database": "Ensembl Peptide", "id": "AT4G01740.1", "url": "https://www.ensemblgenomes.org/id/AT4G01740.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "1999", "authors": "Mayer K, Sch\u00fcller C, Wambutt R, Murphy G, Volckaert G, Pohl T, D\u00fcsterh\u00f6ft A, Stiekema W, Entian K D, Terryn N, Harris B, Ansorge W, Brandt P, Grivell L, Rieger M, Weichselgartner M, de Simone V, Obermaier B, Mache R, M\u00fcller M, Kreis M, Delseny M, Puigdomenech P, Watson M, Schmidtheini T, Reichert B, Portatelle D, Perez-Alonso M, Boutry M, Bancroft I, Vos P, Hoheisel J, Zimmermann W, Wedler H, Ridley P, Langham S A, McCullagh B, Bilham L, Robben J, Van der Schueren J, Grymonprez B, Chuang Y J, Vandenbussche F, Braeken M, Weltjens I, Voet M, Bastiaens I, Aert R, Defoor E, Weitzenegger T, Bothe G, Ramsperger U, Hilbert H, Braun M, Holzer E, Brandt A, Peters S, van Staveren M, Dirske W, Mooijman P, Klein Lankhorst R, Rose M, Hauf J, K\u00f6tter P, Berneiser S, Hempel S, Feldpausch M, Lamberth S, Van den Daele H, De Keyser A, Buysshaert C, Gielen J, Villarroel R, De Clercq R, Van Montagu M, Rogers J, Cronin A, Quail M, Bray-Allen S, Clark L, Doggett J, Hall S, Kay M, Lennard N, McLay K, Mayes R, Pettett A, Rajandream M A, Lyne M, Benes V, Rechmann S, Borkova D, Bl\u00f6cker H, Scharfe M, Grimm M, L\u00f6hnert T H, Dose S, de Haan M, Maarse A, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Fartmann B, Granderath K, Dauner D, Herzl A, Neumann S, Argiriou A, Vitale D, Liguori R, Piravandi E, Massenet O, Quigley F, Clabauld G, M\u00fcndlein A, Felber R, Schnabl S, Hiller R, Schmidt W, Lecharny A, Aubourg S, Chefdor F, Cooke R, Berger C, Montfort A, Casacuberta E, Gibbons T, Weber N, Vandenbol M, Bargues M, Terol J, Torres A, Perez-Perez A, Purnelle B, 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"MDSDGVSVPLIHEHLMMPCNDLRRGDCCERLEAISDGYYCTTCDFFVHKKCGDEASECIENPFHSNHPLRLGFLSRLQRQHWLKVVRSCDLCGKNIGDLFYRCEICDFDMDLHCAKYPPLEVIDIPEMHSHKLNLLKDRVEFDCDAKCGKIGYGFPYECHECDSKFHVDCVRYSSSEEVKHPLEVNHSYHSLHPLKLLMGQPPDYSDGKCRLCGRKIDDKLFYHCSSCNFTLDMRCVLNPPPKSVLDLKTHDHQLNLLPRLIFFTCNACGLNGDRSPYACFQCDFLIHKDCFGLPRLININRHDHRISRTSLIGIVNSVCGVCRQKVDWTCGGYSCQRCSTYIAHSKCATREDVWNGKELEGVPEEIEDIEPYVVIDDNTIQHFSHKEHYMRLNVNGLMCEVNKRCNACNHPISPQSFYGCMDCDFILHQNCAGFPRRKWHVLHNERLALVTSEVNIFGCSACHKIFNGFRYEHEDTKLDVLCGSFSEPFIHPSHPHHPLYCISPEDDEVCSGCNERSYHVLRCIEDNCGFILDFGCATFPQVVKHRIEDQPLSLCYGEKASGKYWCDICEKETNPNTWFYTCKDHRASLHTWCVLGDFMGLIPKSTIELWNISYEVVLNNSISRPICRHCKSHCIPPIILKKIGTSDPYFCSLDCIESFKRLWRAK", "length": 667, "header": "tr|Q9ZSJ1-1|Q9ZSJ1_ARATH Isoform 1 of Cysteine/Histidine-rich C1 domain family protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9ZSJ1-1" }, "isoforms": [ { "isoform_ac": "Q9ZSJ1-1", "url": "https://www.uniprot.org/uniprotkb/Q9ZSJ1/entry", "sequence": { "sequence": 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"PF08263", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF08263", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF13855", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF13855", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "AT4G03010", "url": "https://www.arabidopsis.org/servlets/TairObject?type=locus&name=AT4G03010", "database": "TAIR", "categories": [ "Protein", "Organism-specific" ] }, { "id": "Q9ZT98", "url": "https://www.uniprot.org/uniprotkb/Q9ZT98", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9ZT98-1", "url": "https://www.uniprot.org/uniprotkb/Q9ZT98-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MRFATLFSVLLLLLRFGLIVESIIVPVDFLALQAIRKSLDDLPGSNFFDSWDFTSDPCNFAGVYCDDDKVTALNLGDPRAGSPGLSGRIDPAIGKLSALTELSIVPGRIMGSLPHTISQSKNLRFLAISRNFISGEIPASLSELRGLKTLDLSYNQLTGSIPPSIGSLPELSNLILCHNHLNGSIPQFLSQSLTRIDLKRNNLTGIISLTSLPPSLQYLSLAWNQLTGPVYRVLLRLNQLNYLDLSLNRFTGAIPGQIFTFPITNLQLQRNFFYGVIQPPNQVTIPTVDLSYNRFSGELSPLLSNVQNLYLNNNRFTGQVPVSFVDRLLASNIQTLYLQHNFLTGIQISPAADIPVSSSLCLQYNCMVLPVQTPCPVKAGLQKTRPTTQCSEWRG", "length": 395, "header": "tr|Q9ZT98-1|Q9ZT98_ARATH Isoform 1 of RNI-like superfamily protein OS=Arabidopsis thaliana OX=3702 GN= PE=1 SV=1 CANONICAL=Q9ZT98-1" }, "isoforms": [ { "isoform_ac": "Q9ZT98-1", "url": "https://www.uniprot.org/uniprotkb/Q9ZT98/entry", "sequence": { "sequence": 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L, Sehkon M, Murray J, Sheet P, Cordes M, Abu-Threideh J, Stoneking T, Kalicki J, Graves T, Harmon G, Edwards J, Latreille P, Courtney L, Cloud J, Abbott A, Scott K, Johnson D, Minx P, Bentley D, Fulton B, Miller N, Greco T, Kemp K, Kramer J, Fulton L, Mardis E, Dante M, Pepin K, Hillier L, Nelson J, Spieth J, Ryan E, Andrews S, Geisel C, Layman D, Du H, Ali J, Berghoff A, Jones K, Drone K, Cotton M, Joshu C, Antonoiu B, Zidanic M, Strong C, Sun H, Lamar B, Yordan C, Ma P, Zhong J, Preston R, Vil D, Shekher M, Matero A, Shah R, Swaby I K, O'Shaughnessy A, Rodriguez M, Hoffmann J, Till S, Granat S, Shohdy N, Hasegawa A, Hameed A, Lodhi M, Johnson A, Chen E, Marra M, Martienssen R, McCombie W R", "evidence": [ { "database": "UniProtKB", "id": "Q9ZT98", "url": "https://www.uniprot.org/uniprotkb/Q9ZT98" } ], "reference": [ { "type": "PubMed", "id": "10617198", "url": "https://glygen.org/publication/PubMed/10617198" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis 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transduction", "id": "GO:0007165", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007165", "evidence": [ { "database": "UniProtKB", "id": "Q9ZT98", "url": "https://www.uniprot.org/uniprotkb/Q9ZT98" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 182, "end_pos": 184, "annotation": "n_glycosylation_sequon" }, { "start_pos": 202, "end_pos": 204, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "Q9ZT98", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/Q9ZT98" }, { "id": "PF08263", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF08263" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Leucine-rich repeat-containing N-terminal plant-type", "eco_id": "ECO_0000259", "start_pos": 28, "end_pos": 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"https://www.ensemblgenomes.org/id/AT4G03040.1" } ] } } ], "glycosylation": [], "phosphorylation": [ { "start_pos": 38, "end_pos": 38, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9ZTA0", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9ZTA0" } ], "site_lbl": "Ser38" }, { "start_pos": 47, "end_pos": 47, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Thr", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9ZTA0", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9ZTA0" } ], "site_lbl": "Thr47" }, { "start_pos": 49, "end_pos": 49, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9ZTA0", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9ZTA0" } ], "site_lbl": "Ser49" } ], "glycation": [], "keywords": [], "publication": [ { "title": 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J, Villarroel R, De Clercq R, Van Montagu M, Rogers J, Cronin A, Quail M, Bray-Allen S, Clark L, Doggett J, Hall S, Kay M, Lennard N, McLay K, Mayes R, Pettett A, Rajandream M A, Lyne M, Benes V, Rechmann S, Borkova D, Bl\u00f6cker H, Scharfe M, Grimm M, L\u00f6hnert T H, Dose S, de Haan M, Maarse A, Sch\u00e4fer M, M\u00fcller-Auer S, Gabel C, Fuchs M, Fartmann B, Granderath K, Dauner D, Herzl A, Neumann S, Argiriou A, Vitale D, Liguori R, Piravandi E, Massenet O, Quigley F, Clabauld G, M\u00fcndlein A, Felber R, Schnabl S, Hiller R, Schmidt W, Lecharny A, Aubourg S, Chefdor F, Cooke R, Berger C, Montfort A, Casacuberta E, Gibbons T, Weber N, Vandenbol M, Bargues M, Terol J, Torres A, Perez-Perez A, Purnelle B, Bent E, Johnson S, Tacon D, Jesse T, Heijnen L, Schwarz S, Scholler P, Heber S, Francs P, Bielke C, Frishman D, Haase D, Lemcke K, Mewes H W, Stocker S, Zaccaria P, Bevan M, Wilson R K, de la Bastide M, Habermann K, Parnell L, Dedhia N, Gnoj L, Schutz K, Huang E, Spiegel L, 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"length": 989, "header": "tr|Q9ZU00-1|Q9ZU00_ARATH Isoform 1 of DC1 domain-containing protein OS=Arabidopsis thaliana OX=3702 GN= PE=4 SV=1 CANONICAL=Q9ZU00-1" }, "isoforms": [ { "isoform_ac": "Q9ZU00-1", "url": "https://www.uniprot.org/uniprotkb/Q9ZU00/entry", "sequence": { "sequence": 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CANONICAL=Q9ZU41-1" }, "locus": { "chromosome": "2", "start_pos": 135223, "end_pos": 137916, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT2G01260.1", "url": "https://www.ensemblgenomes.org/id/AT2G01260.1" }, { "database": "Ensembl Peptide", "id": "AT2G01260.1", "url": "https://www.ensemblgenomes.org/id/AT2G01260.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "1999", "authors": "Lin X, Kaul S, Rounsley S, Shea T P, Benito M I, Town C D, Fujii C Y, Mason T, Bowman C L, Barnstead M, Feldblyum T V, Buell C R, Ketchum K A, Lee J, Ronning C M, Koo H L, Moffat K S, Cronin L A, Shen M, Pai G, Van Aken S, Umayam L, Tallon L J, Gill J E, Adams M D, Carrera A J, Creasy T H, Goodman H M, Somerville C R, Copenhaver G P, Preuss D, Nierman W C, White O, Eisen J A, Salzberg S L, Fraser C M, Venter J 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"glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "gene": [ { "name": "PDE331", "url": "https://www.uniprot.org/uniprotkb/Q9ZU48", "locus": { "chromosome": "CP002685.1", "start_pos": 117750, "end_pos": 114926, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "AT2G01190", "url": "https://www.ensemblgenomes.org/id/AT2G01190" } ] } } ], "crossref": [ { "id": "AT2G01190", "url": "https://bar.utoronto.ca/thalemine/portal.do?externalids=AT2G01190", "database": "Araport", "categories": [ "Protein", "Organism-specific" ] }, { "id": "cd06410", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd06410", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "814647", "url": "https://www.ncbi.nlm.nih.gov/gene/814647", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR000270", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000270", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR053198", "url": "https://www.ebi.ac.uk/interpro/entry/IPR053198", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR053793", "url": "https://www.ebi.ac.uk/interpro/entry/IPR053793", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ath:AT2G01190", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT2G01190", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "Q9ZU48", "url": "https://oglcnac.org/atlas/detail/Q9ZU48", "database": "O-GlcNAc Atlas", "categories": [ "Glycoproteomics" ] }, { "id": "AQMVHQI", "url": "https://omabrowser.org/oma/group/AQMVHQI/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR31066", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31066", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR31066:SF27", "url": 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"MEPPPSSLSSTAVASTSISAATAPVPPPLPPHVTSSYPESLDSSPRSRTTDGWDDLPAPSGGGGGGGGSAVSSKLRFMCSYGGHILPRPHDKSLCYMGGDTRIVVVDRNSSLPSLIARLSNTLLDGRSFTLKYQLPSEDLDSLISVTTDEDLDNMIEEYDRTISASNSTKPSRLRLFLFTSKPEATQSMGQILESSAKSDDWFLNALNSAGLLNRGFSDSDTNVNRLLGLDDALALRSNSGDNNNRDGDDGSVKSAKQQQPPPPQQQEQQQGGQDVNCLPDSPMLDTSSSFGSTSSSPSLANLPPIRVHVEEPGGVRTLPDQRNLGIEEQFARFNVGNKHQLHDDGFAAISSPPPMPVTIALPAAPVTAATVSNEFQARVYSDDERSDHGVQAGYRKPPTPRSQPQNLPPQQAHQLKSNSGGGHELPSPNSVSSDSSMSNPMFHQRPSVYQEPIAQIPSGSTVVTGMINPSDPSTLLSQHQNQDPAYILHPQFEQQSAQSQPQQQFIHTAAPPQYIHHHPSSGLPVPTYIQVYPSQQPQQSFHQHAGRLDQQPYPVYYVTAPVPPRPYSMPVPQSPSVSDAAGSIPSNHPNSTMMPPPPNNHMRSVSSGKPEMGQAGVYTTAPGVGGAQMVHQIPTNQQQFMGYSQIRHPPQSGSAGNPNYGYEYVDNAHTQIYYTQPMGHAQYQTMTGPPPAMVMPDGSAAAKLPAENMTQQIRSSQPL", "length": 720, "header": "tr|Q9ZU48-1|Q9ZU48_ARATH Isoform 1 of Octicosapeptide/Phox/Bem1p family protein OS=Arabidopsis thaliana OX=3702 GN=PDE331 PE=1 SV=2 CANONICAL=Q9ZU48-1" }, "isoforms": [ { "isoform_ac": "Q9ZU48-1", "url": 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"000000000000000100000.xxxxxxx.00000001000000.xxxxxxx.xxxxxxxxxx.xxxxxxxxxxxxxxxxxx.xxxxx.01000" }, { "glytoucan_ac": "", "type": "O-linked", "subtype": "other", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 560, "start_aa": "Thr", "end_pos": 560, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr560", "evidence": [ { "id": "GLY_001156", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001156" } ], "filter_code": "000000000000000010000.00000000001000.0.01000" }, { "glytoucan_ac": "G49108TO", "type": "O-linked", "subtype": "O-GlcNAcylation", "prediction_tool_list": [], "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "", "relation": "attached", "comment": "O-GlcNAcylation", "icn3d_view": {}, "evidence": [ { 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"https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ], "site_lbl": "Ser218" }, { "start_pos": 220, "end_pos": 220, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9ZU48", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9ZU48" }, { "database": "PubMed", "id": "23776212", "url": "https://glygen.org/publication/PubMed/23776212" }, { "database": "PubMed", "id": "25561503", "url": "https://glygen.org/publication/PubMed/25561503" }, { "database": "PubMed", "id": "30833711", "url": "https://glygen.org/publication/PubMed/30833711" } ], "site_lbl": "Ser220" }, { "start_pos": 222, "end_pos": 222, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Thr", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9ZU48", "url": 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}, { "id": "Q9ZUB7", "url": "https://www.uniprot.org/uniprotkb/Q9ZUB7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "Q9ZUB7-1", "url": "https://www.uniprot.org/uniprotkb/Q9ZUB7-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MAALAPGILQKLIDGMKTGVKPTGEHRSSLLQVTDIVPIDLDEKNLLPKQGFFIKVSDSSHSIYVSLPSDQDDDVLSNKMQLGQFIYVDRLDPGTPVPIIKGARPIPGRHPLLGTPEPLMSTRGKIESSRPRRGSWGQNGDVSSPFVLKPAPLDFDQCTPAKHRLGTGRFMAASPNVMTRGRSPGGVRCSYGGGLLSKMAESPAAMMRKSCVVPPSSKFPRSKSVCDRETMAKNSVLFSPFKSSAKKNDSPPPSVRTRRATAASLLEDEREAPKSTSKYSKLEKPEKSLSLPGRLSTLSKEAMQQRETAQKIALQALREATTTETVVRHLKTFANLSKSAKADCPAACFDKFLEFHSQISETMNEIASIEAAASPATTEKKSEDGSLILHEIQHNSIDQEKTTSKRRILLKQQQKRSNDENKNPAVSLSGLGNTARLVKEIEKEAANWFMEFIEKALEKGMKKCKGTSDADVKKVPQSLILKVVNWVEEEHSADNTKRPVHPKASHITRKLRIKLKNP", "length": 518, "header": "sp|Q9ZUB7-1|CORD4_ARATH Isoform 1 of Protein CORTICAL MICROTUBULE DISORDERING 4 OS=Arabidopsis thaliana OX=3702 GN=CORD4 PE=2 SV=1 CANONICAL=Q9ZUB7-1" }, "isoforms": [ { "isoform_ac": "Q9ZUB7-1", "url": "https://www.uniprot.org/uniprotkb/Q9ZUB7/entry#Q9ZUB7-1", "sequence": { "sequence": "MAALAPGILQKLIDGMKTGVKPTGEHRSSLLQVTDIVPIDLDEKNLLPKQGFFIKVSDSSHSIYVSLPSDQDDDVLSNKMQLGQFIYVDRLDPGTPVPIIKGARPIPGRHPLLGTPEPLMSTRGKIESSRPRRGSWGQNGDVSSPFVLKPAPLDFDQCTPAKHRLGTGRFMAASPNVMTRGRSPGGVRCSYGGGLLSKMAESPAAMMRKSCVVPPSSKFPRSKSVCDRETMAKNSVLFSPFKSSAKKNDSPPPSVRTRRATAASLLEDEREAPKSTSKYSKLEKPEKSLSLPGRLSTLSKEAMQQRETAQKIALQALREATTTETVVRHLKTFANLSKSAKADCPAACFDKFLEFHSQISETMNEIASIEAAASPATTEKKSEDGSLILHEIQHNSIDQEKTTSKRRILLKQQQKRSNDENKNPAVSLSGLGNTARLVKEIEKEAANWFMEFIEKALEKGMKKCKGTSDADVKKVPQSLILKVVNWVEEEHSADNTKRPVHPKASHITRKLRIKLKNP", "length": 518, "header": "sp|Q9ZUB7-1|CORD4_ARATH Isoform 1 of Protein CORTICAL MICROTUBULE DISORDERING 4 OS=Arabidopsis thaliana OX=3702 GN=CORD4 PE=2 SV=1 CANONICAL=Q9ZUB7-1" }, "locus": { "chromosome": "1", "start_pos": 8409945, "end_pos": 8412079, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "AT1G23790.1", "url": 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Militscher J, Miranda M, Nguyen M, Nierman W C, Osborne B I, Pai G, Peterson J, Pham P K, Rizzo M, Rooney T, Rowley D, Sakano H, Salzberg S L, Schwartz J R, Shinn P, Southwick A M, Sun H, Tallon L J, Tambunga G, Toriumi M J, Town C D, Utterback T, Van Aken S, Vaysberg M, Vysotskaia V S, Walker M, Wu D, Yu G, Fraser C M, Venter J C, Davis R W", "evidence": [ { "database": "UniProtKB", "id": "Q9ZUB7", "url": "https://www.uniprot.org/uniprotkb/Q9ZUB7" } ], "reference": [ { "type": "PubMed", "id": "11130712", "url": "https://glygen.org/publication/PubMed/11130712" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9ZUB7", "url": "https://www.uniprot.org/uniprotkb/Q9ZUB7" } ], "reference": [ { "type": "PubMed", "id": "27862469", 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Hirofumi, Sugiyama Naoyuki, Mochida Keiichi, Daudi Arsalan, Yoshida Yuko, Toyoda Tetsuro, Tomita Masaru, Ishihama Yasushi, Shirasu Ken", "evidence": [ { "database": "iPTMnet", "id": "Q9ZUC4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9ZUC4" } ], "reference": [ { "type": "PubMed", "id": "20466843", "url": "https://glygen.org/publication/PubMed/20466843" } ] }, { "title": "Genetics and phosphoproteomics reveal a protein phosphorylation network in the abscisic acid signaling pathway in Arabidopsis thaliana.", "journal": "Science signaling", "date": "2013-04-09", "authors": "Umezawa Taishi, Sugiyama Naoyuki, Takahashi Fuminori, Anderson Jeffrey C, Ishihama Yasushi, Peck Scott C, Shinozaki Kazuo", "evidence": [ { "database": "iPTMnet", "id": "Q9ZUC4", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9ZUC4" } ], "reference": [ { "type": "PubMed", "id": "23572148", "url": "https://glygen.org/publication/PubMed/23572148" } ] }, { "title": "Araport11: a 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Cristina, Nakajima Maiko, Narusaka Mari, Seki Motoaki, Sakurai Tetsuya, Satou Masakazu, Tamse Racquel, Vaysberg Maria, Wallender Erika K, Wong Cecilia, Yamamura Yuki, Yuan Shiaulou, Shinozaki Kazuo, Davis Ronald W, Theologis Athanasios, Ecker Joseph R", "evidence": [ { "database": "UniProtKB", "id": "Q9ZUH0", "url": "https://www.uniprot.org/uniprotkb/Q9ZUH0" } ], "reference": [ { "type": "PubMed", "id": "14593172", "url": "https://glygen.org/publication/PubMed/14593172" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9ZUH0", "url": "https://www.uniprot.org/uniprotkb/Q9ZUH0" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": 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"start_pos": 290, "end_pos": 290, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9ZUI7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9ZUI7" }, { "database": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" } ], "site_lbl": "Ser290" } ], "glycation": [], "keywords": [], "publication": [ { "title": "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.", "journal": "Nature", "date": "2000", "authors": "Theologis A, Ecker J R, Palm C J, Federspiel N A, Kaul S, White O, Alonso J, Altafi H, Araujo R, Bowman C L, Brooks S Y, Buehler E, Chan A, Chao Q, Chen H, Cheuk R F, Chin C W, Chung M K, Conn L, Conway A B, Conway A R, Creasy T H, Dewar K, Dunn P, Etgu P, Feldblyum T V, Feng J, Fong B, Fujii C Y, Gill J E, Goldsmith A D, Haas B, Hansen N F, Hughes B, Huizar L, Hunter J L, Jenkins J, Johnson-Hopson C, Khan S, Khaykin E, Kim C J, Koo H L, Kremenetskaia I, Kurtz D B, Kwan A, Lam B, Langin-Hooper S, Lee A, Lee J M, Lenz C A, Li J H, Li Y, Lin X, Liu S X, Liu Z A, Luros J S, Maiti R, Marziali A, Militscher J, Miranda M, Nguyen M, Nierman W C, Osborne B I, Pai G, Peterson J, Pham P K, Rizzo M, Rooney T, Rowley D, Sakano H, Salzberg S L, Schwartz J R, Shinn P, Southwick A M, Sun H, Tallon L J, Tambunga G, Toriumi M J, Town C D, Utterback T, Van Aken S, Vaysberg M, Vysotskaia V S, Walker M, Wu D, Yu G, Fraser C M, Venter J C, Davis R W", "evidence": [ { "database": "UniProtKB", "id": "Q9ZUI7", "url": "https://www.uniprot.org/uniprotkb/Q9ZUI7" } ], "reference": [ { "type": "PubMed", "id": "11130712", "url": "https://glygen.org/publication/PubMed/11130712" } ] }, { "title": "A large-scale protein phosphorylation analysis reveals novel phosphorylation motifs and phosphoregulatory networks in Arabidopsis.", "journal": "Journal of proteomics", "date": "2013-01-14", "authors": "Wang Xu, Bian Yangyang, Cheng Kai, Gu Li-Fei, Ye Mingliang, Zou Hanfa, Sun Samuel Sai-Ming, He Jun-Xian", "evidence": [ { "database": "iPTMnet", "id": "Q9ZUI7", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9ZUI7" } ], "reference": [ { "type": "PubMed", "id": "23111157", "url": "https://glygen.org/publication/PubMed/23111157" } ] }, { "title": "Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.", "journal": "Plant J.", "date": "2017", "authors": "Cheng Chia-Yi, Krishnakumar Vivek, Chan Agnes P, Thibaud-Nissen Fran\u00e7oise, Schobel Seth, Town Christopher D", "evidence": [ { "database": "UniProtKB", "id": "Q9ZUI7", "url": "https://www.uniprot.org/uniprotkb/Q9ZUI7" } ], "reference": [ { "type": "PubMed", "id": "27862469", "url": "https://glygen.org/publication/PubMed/27862469" } ] } ], "pathway": [ { "id": "ath:AT1G60060", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ath:AT1G60060", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { 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