{ "glytoucan_ac": "G18464VS", "number_monosaccharides": 2, "mass": 504.13, "mass_pme": 602.24, "fully_determined": "", "iupac": "beta-D-GalpNAc4S-(1->4)-?-D-GlcpNAc-(1->", "wurcs": "WURCS=2.0/2,2,1/[a2122h-1x_1-5_2*NCC/3=O][a2112h-1b_1-5_2*NCC/3=O_4*OSO/3=O/3=O]/1-2/a4-b1", "glycoct": "RES 1b:x-dglc-HEX-1:5 2s:n-acetyl 3b:b-dgal-HEX-1:5 4s:n-acetyl 5s:sulfate LIN 1:1d(2+1)2n 2:1o(4+1)3d 3:3d(2+1)4n 4:3o(4+1)5n", "inchi": "InChI=1S/C16H28N2O14S/c1-5(21)17-9-11(23)13(7(3-19)29-15(9)25)31-16-10(18-6(2)22)12(24)14(8(4-20)30-16)32-33(26,27)28/h7-16,19-20,23-25H,3-4H2,1-2H3,(H,17,21)(H,18,22)(H,26,27,28)/t7-,8-,9-,10-,11-,12-,13-,14+,15?,16+/m1/s1", "glycam": "", "smiles_isomeric": "CC(=O)N[C@@H]1[C@H]([C@H]([C@H](O[C@H]1O[C@@H]2[C@H](OC([C@@H]([C@H]2O)NC(=O)C)O)CO)CO)OS(=O)(=O)O)O", "inchi_key": { "key": "GSARWNMTBKHGPX-JJYFQBDTSA-N", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/GSARWNMTBKHGPX-JJYFQBDTSA-N" }, "crossref": [ { "id": "G18464VS", "database": "GlyTouCan", "url": "https://glytoucan.org/Structures/Glycans/G18464VS", "categories": [ "Glycomics" ] }, { "id": "GSD000191", "url": "https://wiki.glygen.org/Glycan_structure_dictionary#GSD000191", "database": "Glycan Structure Dictionary", "categories": [ "Ontology and Dictionary" ] } ], "publication": [ { "title": "The mannose/N-acetylgalactosamine-4-SO4 receptor displays greater specificity for multivalent than monovalent ligands.", "journal": "The Journal of biological chemistry", "date": "2001", "authors": "Roseman DS, Baenziger JU", "evidence": [ { "database": "Glycan Motif", "id": "GGM.000049", "url": "https://glycomotif.glyomics.org/glycomotif/GGM.000049" } ], "reference": [ { "type": "PubMed", "id": "11279168", "url": "https://glygen.org/publication/PubMed/11279168" } ] }, { "title": "The repertoire of glycan determinants in the human glycome.", "journal": "Molecular bioSystems", "date": "2009", "authors": "Cummings RD", "evidence": [ { "database": "Glycan Motif", "id": "GGM.000049", "url": "https://glycomotif.glyomics.org/glycomotif/GGM.000049" } ], "reference": [ { "type": "PubMed", "id": "19756298", "url": "https://glygen.org/publication/PubMed/19756298" } ] } ], "residues": [], "composition": [ { "name": "6-Deoxy-Hexose", "residue": "dhex", "count": 0, "cid": "840", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/840" }, { "name": "Hexose", "residue": "hex", "count": 0, "cid": "206", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/206" }, { "name": "N-Acetylhexosamine", "residue": "hexnac", "count": 2, "cid": "899", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/899" }, { "name": "Hexuronic Acid", "residue": "hexa", "count": 0, "cid": "610", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/610" }, { "name": "2-Amino-2-Deoxy-Hexose", "residue": "hexn", "count": 0, "cid": "739", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/739" }, { "name": "N-Acetyl-Neuraminic Acid", "residue": "neuac", "count": 0, "cid": "439197", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/439197" }, { "name": "N-Glycolyl-Neuraminic Acid", "residue": "neugc", "count": 0, "cid": "440001", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/440001" }, { "name": "Phosphate", "residue": "p", "count": 0, "cid": "1061", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/1061" }, { "name": "Pentose", "residue": "pent", "count": 0, "cid": "229", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/229" }, { "name": "Sulfate", "residue": "s", "count": 1, "cid": "1117", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/1117" }, { "name": "Other", "residue": "other", "count": 0 } ], "composition_expanded": [ { "name": "Alditol", "residue": "aldi", "count": 0 }, { "name": "6-Deoxy-Hexose", "residue": "dhex", "count": 0, "cid": "840", "url": "https://pubchem.ncbi.nlm.nih.gov/compound/840" }, { "name": "6-Deoxy-Hexitol", "residue": "dhex+aldi", "count": 0 }, { "name": "L-Fucose", "residue": "fuc", "count": 0, "cid": "17106", "url": 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"https://glytoucan.org/Structures/Glycans/G95710IM" }, { "glytoucan_ac": "G96103YI", "url": "https://glytoucan.org/Structures/Glycans/G96103YI" }, { "glytoucan_ac": "G96932XT", "url": "https://glytoucan.org/Structures/Glycans/G96932XT" }, { "glytoucan_ac": "G97298FJ", "url": "https://glytoucan.org/Structures/Glycans/G97298FJ" }, { "glytoucan_ac": "G97483RC", "url": "https://glytoucan.org/Structures/Glycans/G97483RC" }, { "glytoucan_ac": "G97828HF", "url": "https://glytoucan.org/Structures/Glycans/G97828HF" }, { "glytoucan_ac": "G98117HW", "url": "https://glytoucan.org/Structures/Glycans/G98117HW" }, { "glytoucan_ac": "G99009ZZ", "url": "https://glytoucan.org/Structures/Glycans/G99009ZZ" }, { "glytoucan_ac": "G99185IF", "url": "https://glytoucan.org/Structures/Glycans/G99185IF" }, { "glytoucan_ac": "G99225RS", "url": "https://glytoucan.org/Structures/Glycans/G99225RS" }, { "glytoucan_ac": "G99235YT", "url": "https://glytoucan.org/Structures/Glycans/G99235YT" }, { "glytoucan_ac": "G99390JL", "url": "https://glytoucan.org/Structures/Glycans/G99390JL" }, { "glytoucan_ac": "G99511DI", "url": "https://glytoucan.org/Structures/Glycans/G99511DI" }, { "glytoucan_ac": "G99714FV", "url": "https://glytoucan.org/Structures/Glycans/G99714FV" }, { "glytoucan_ac": "G99832EM", "url": "https://glytoucan.org/Structures/Glycans/G99832EM" }, { "glytoucan_ac": "G99897FQ", "url": "https://glytoucan.org/Structures/Glycans/G99897FQ" }, { "glytoucan_ac": "G99935CU", "url": "https://glytoucan.org/Structures/Glycans/G99935CU" }, { "glytoucan_ac": "G99987VT", "url": "https://glytoucan.org/Structures/Glycans/G99987VT" } ], "subsumption": [ { "id": "G08248ZH", "type": "BaseComposition" }, { "id": "G11286JG", "type": "Saccharide" }, { "id": "G17605FD", "type": "Composition" }, { "id": "G21481TB", "type": "Topology" }, { "id": "G31282CB", "type": "BaseComposition" }, { "id": "G49589HV", "type": "BaseComposition" }, { "id": "G57195RJ", "type": "Composition" }, { "id": "G72393QD", "type": "Composition" }, { "id": "G92024ZJ", "type": "BaseComposition" }, { "id": "G99235YT", "type": "Topology" }, { "id": "G33129LQ", "type": "Saccharide" }, { "id": "G81389XE", "type": "Saccharide" } ], "names": [ { "name": "4'-sulfated LDN", "domain": "motifname" } ], "synonym": [], "keywords": [ { "label": "LacdiNAc", "url": "https://glycomotif.glyomics.org/glycomotif/LacdiNAc" }, { "label": "N,N'-diacetyllactosediamine", "url": "https://glycomotif.glyomics.org/glycomotif/N,N'-diacetyllactosediamine" } ], "reducing_end": "false", "aglycon": "R", "alignment_method": "Substructure", "dictionary": { "term": "Sulfated LacdiNAc", "term_in_sentence": "The mRNA expression of the enzymes related to the formation of sulfated LacdiNAc:\u03b2(1,4)-N-acetylgalactosaminyltransferases 3 (B4GALNT3) and 4 (B4GALNT4), carbohydrate sulfotransferases 8 (CHST8) and 9 (CHST9); and \u03b2(1,4)-galactosyltransferase 1 (B4GALT1) in these cells was confirmed by RT-PCR (Fig. S4).[PMID:31558607]", "publication": "31558607|27318476|19756298|11279168|26688390", "definition": "", "term_xref": "GlycoMotif:GGM.000049", "synonymns": [ "4'-O-sulfated LacdiNAc", "4'-sulfated LDN", "sulfated LDN" ], "function": "", "disease_associations": "", "wikipedia": "", "essentials_of_glycobiology": "", "evidence": [ { "id": "GSD000191", "url": "https://wiki.glygen.org/Glycan_structure_dictionary#GSD000191", "database": "Glycan Structure Dictionary" } ] }, "biomarkers": [], "motif_ac": "GGM.000049", "section_stats": [ { "table_id": "results", "table_stats": [ { "field": "total", "count": 484 } ], "sort_fields": [ "glytoucan_ac", "url" ] } ] }