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MXE10.8; MXE10_8", "gene_names_refseq": "AGAMOUS-like 15; AGL15; MADS-BOX PROTEIN AGL15; MXE10.8; MXE10_8", "protein_names_uniprotkb": "Agamous-like MADS-box protein AGL15", "protein_names_refseq": "AGAMOUS-like 15", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G13790)", "pathway_count": 1, "publication_count": 23, "publication_id_list": "10318690;10662856;11130714;12226488;12743119;12837945;12949148;14615187;15084721;15686521;15805477;16028119;17521410;18305206;19269998;19767455;27322882;27862469;7549482;7549483;8953767;9330910;9679202", "class_list": "", "function": "Transcription factor involved in the negative regulation of flowering, probably through the photoperiodic pathway. Acts both as an activator and as a repressor of transcription. Binds DNA in a sequence-specific manner in large CArG motif 5'-CC (A/T)8 GG-3'. Participates probably in the regulation of programs active during the early stages of embryo development. Prevents premature perianth senescence and abscission, fruits development and seed desiccation. Stimulates the expression of at least DTA4, LEC2, FUS3, ABI3, AT4G38680/CSP2 and GRP2B/CSP4. Can enhance somatic embryo development in vitro., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q38839", "ec_number_list": [], "go_molecular_function": "GO:0003677 DNA binding;GO:0003700 DNA-binding transcription factor activity;GO:0042803 protein homodimerization activity;GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding;GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006357 regulation of transcription by RNA polymerase II;GO:0010629 negative regulation of gene expression;GO:0045944 positive regulation of transcription by RNA polymerase II;GO:0045892 negative regulation of DNA-templated transcription", "synthesized_glycan_count": 0, "hit_score": 2.4, "record_id": "Q38847-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "P48002-1", "uniprot_id": [ { "id": "KNAT5_ARATH", "url": "https://www.uniprot.org/uniprot/P48002", "type": "external" } ], "mass": 43284.0, "length": 383, "protein_name": "Homeobox protein knotted-1-like 5", "gene_name": "KNAT5", "organism": "Arabidopsis", "refseq_name": "homeobox protein knotted-1-like 5", "refseq_ac": [ { "id": "NP_194932", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_194932", "type": "external" } ], "gene_names_uniprotkb": "KNAT5; ATH1; F10N7.150; F10N7_150; KNOTTED1-like homeobox gene 5; TRANSCRIPTION FACTOR", "gene_names_refseq": "F10N7.150; F10N7_150; KNAT5; KNOTTED1-like homeobox gene 5; TRANSCRIPTION FACTOR", "protein_names_uniprotkb": "Homeobox protein knotted-1-like 5; Homeodomain-containing protein 1; Protein KNAT5", "protein_names_refseq": "homeobox protein knotted-1-like 5", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G32040)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "10617198;11701881;15781858;17873098;27862469;8980519", "class_list": "", "function": "", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O49387;Q548P2", "ec_number_list": [], "go_molecular_function": "GO:0003700 DNA-binding transcription factor activity;GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding;GO:0003677 DNA binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006357 regulation of transcription by RNA polymerase II;GO:0071369 cellular response to ethylene stimulus;GO:0009727 detection of ethylene stimulus;GO:0006355 regulation of DNA-templated transcription", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "P48002-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q24JJ8-1", "uniprot_id": [ { "id": "HAOX2_ARATH", "url": "https://www.uniprot.org/uniprot/Q24JJ8", "type": "external" } ], "mass": 40130.0, "length": 363, "protein_name": "Peroxisomal (S)-2-hydroxyacid oxidase GLO3", "gene_name": "GLO3; HAOX2", "organism": "Arabidopsis", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "GLO3; HAOX2; MAG2.11", "gene_names_refseq": "", "protein_names_uniprotkb": "Peroxisomal (S)-2-hydroxyacid oxidase GLO3; 1.1.3.15; AtGLO3; GOX 3; Glycolate oxidase 3; Short chain alpha-hydroxy acid oxidase GLO3; lHAOX2", "protein_names_refseq": "", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G14150)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "10907853;11130713;19264754;19329564;24408912;27862469", "class_list": "", "function": "Oxidase that catalyzes the oxidation of a broad range of 2-hydroxyacids to the corresponding 2-oxoacids, with a reduction of O2 to H2O2. Displays the highest activity with leucic acid (2-hydroxy-4-methylpentanoate) and has intermediate activity with 2-hydroxyhexanoate and 2-hydroxyoctanote. Shows lower activity with 2-hydroxydodecanoate, valic acid, and isoleucic acid and extremely low activity with glycolate and L-lactate. Cannot use 2-hydroxyhexadecanoate or D-lactate as substrates. May be involved in the conversion or degradation of 2-hydroxyacids produced during the metabolism of fatty acids or amino acids., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q8L8P3;Q9LJH3", "ec_number_list": [ { "id": "1.1.3.15", "url": "https://www.rhea-db.org/rhea/?query=ec:1.1.3.15", "type": "external" } ], "go_molecular_function": "GO:0010181 FMN binding;GO:0003973 (S)-2-hydroxy-acid oxidase activity", "go_cellular_component": "GO:0005777 peroxisome;GO:0009507 chloroplast", "go_biological_process": "GO:0042742 defense response to bacterium;GO:0050665 hydrogen peroxide biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q24JJ8-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1G3Q4-1", "uniprot_id": [ { "id": "RITF1_ARATH", "url": "https://www.uniprot.org/uniprot/Q1G3Q4", "type": "external" } ], "mass": 28849.0, "length": 256, "protein_name": "Protein RGF1 INDUCIBLE TRANSCRIPTION FACTOR 1", "gene_name": "RITF1", "organism": "Arabidopsis", "refseq_name": "PLATZ transcription factor family protein", "refseq_ac": [ { "id": "NP_001031352", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001031352", "type": "external" } ], "gene_names_uniprotkb": "RITF1; T4E5", "gene_names_refseq": "", "protein_names_uniprotkb": "Protein RGF1 INDUCIBLE TRANSCRIPTION FACTOR 1", "protein_names_refseq": "PLATZ transcription factor family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G12646)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "10617197;17147637;27862469;31801996", "class_list": "", "function": "Probable transcription factor that plays a central role in mediating RGF1 hormone peptide signaling leading to the production of reactive oxygen species (ROS) in roots to modulate meristem size and root growth, probably via oxidative post-translational modification of the transcription factor PLETHORA (e.g. PLT1 and PLT2)., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A178W1S1", "ec_number_list": [], "go_molecular_function": "GO:0008270 zinc ion binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:2000377 regulation of reactive oxygen species metabolic process;GO:0043434 response to peptide hormone;GO:0010078 maintenance of root meristem identity;GO:2000280 regulation of root development", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "Q1G3Q4-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q06AN9-1", "uniprot_id": [ { "id": "CD27A_ARATH", "url": "https://www.uniprot.org/uniprot/Q06AN9", "type": "external" } ], "mass": 81114.0, "length": 717, "protein_name": "Cell division cycle protein 27 homolog A", "gene_name": "CDC27A", "organism": "Arabidopsis", "refseq_name": "Tetratricopeptide repeat (TPR)-like superfamily protein", "refseq_ac": [ { "id": "NP_188253", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_188253", "type": "external" } ], "gene_names_uniprotkb": "CDC27A; APC3; CDC27a; T02O04.19", "gene_names_refseq": "CDC27a", "protein_names_uniprotkb": "Cell division cycle protein 27 homolog A; Anaphase-promoting complex subunit 3; CDC27 homolog A", "protein_names_refseq": "Tetratricopeptide repeat (TPR)-like superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G16320)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "10819329;11130713;16940752;17944809;19629716;27862469", "class_list": "", "function": "Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin-protein ligase complex that controls progression through mitosis and the G1 phase of the cell cycle. The APC/C complex controls several key steps in the cell cycle by mediating ubiquitination and subsequent degradation of target proteins such as cyclins. The APC/C complex is required for the female gametophyte development and is involved in several aspect of development by controlling cell division and cell elongation. Involved in the control of endoreduplication. Functionally redundant with CDC27B in the control of gametophyte development., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O04325;Q9LU16", "ec_number_list": [], "go_molecular_function": "GO:0140767 enzyme-substrate adaptor activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005680 anaphase-promoting complex", "go_biological_process": "GO:0051301 cell division;GO:0016567 protein ubiquitination;GO:0031145 anaphase-promoting complex-dependent catabolic process;GO:0007091 metaphase/anaphase transition of mitotic cell cycle", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q06AN9-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "P54968-1", "uniprot_id": [ { "id": "ILR1_ARATH", "url": "https://www.uniprot.org/uniprot/P54968", "type": "external" } ], "mass": 48015.0, "length": 442, "protein_name": "IAA-amino acid hydrolase ILR1", "gene_name": "ILR1", "organism": "Arabidopsis", "refseq_name": "Peptidase M20/M25/M40 family protein", "refseq_ac": [ { "id": "NP_186937", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_186937", "type": "external" } ], "gene_names_uniprotkb": "ILR1; F13E7.18; F13E7_18; IAA-AMINO ACID HYDROLASE; IAA-LEUCINE RESISTANT 1", "gene_names_refseq": "F13E7.18; F13E7_18; IAA-AMINO ACID HYDROLASE; IAA-LEUCINE RESISTANT 1; ILR1", "protein_names_uniprotkb": "IAA-amino acid hydrolase ILR1; 3.5.1.-", "protein_names_refseq": "Peptidase M20/M25/M40 family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G02875)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "10072397;11130713;11923288;14593172;15155875;27862469;7792599", "class_list": "", "function": "Hydrolyzes certain amino acid conjugates of the plant growth regulator indole-3-acetic acid (IAA), including IAA-Phe, IAA-Leu and IAA-Tyr (PubMed:10072397, PubMed:11923288, PubMed:7792599). Can also use IAA-Ala, IAA-Gly, IAA-Met and IAA-Glu as substrates with low efficiency (PubMed:10072397, PubMed:11923288, PubMed:7792599). No activity with IAA-Ile, IAA-1-O-beta-D-glucose or IAA-myo-inositol (PubMed:10072397, PubMed:11923288, PubMed:7792599). Is the most efficient enzyme of the ILL family for IAA-Leu hydrolysis (PubMed:11923288). Important for IAA-Leu and IAA-Phe hydrolysis in roots (PubMed:15155875). May act with ILL2 to provide free IAA to germinating seedlings (PubMed:15155875)., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 3, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9M8S9", "ec_number_list": [], "go_molecular_function": "GO:0046872 metal ion binding;GO:0010179 IAA-Ala conjugate hydrolase activity;GO:0010210 IAA-Phe conjugate hydrolase activity;GO:0010211 IAA-Leu conjugate hydrolase activity;GO:0016787 hydrolase activity", "go_cellular_component": "GO:0005783 endoplasmic reticulum;GO:0009507 chloroplast", "go_biological_process": "GO:0009850 auxin metabolic process", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "P54968-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "O81275-1", "uniprot_id": [ { "id": "CSK2D_ARATH", "url": "https://www.uniprot.org/uniprot/O81275", "type": "external" } ], "mass": 30798.0, "length": 276, "protein_name": "Casein kinase II subunit beta-3", "gene_name": "CKB3", "organism": "Arabidopsis", "refseq_name": "casein kinase II beta chain 3", "refseq_ac": [ { "id": "NP_191584", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_191584", "type": "external" } ], "gene_names_uniprotkb": "CKB3; F27H5_40; casein kinase II beta chain 3", "gene_names_refseq": "CKB3; casein kinase II beta chain 3", "protein_names_uniprotkb": "Casein kinase II subunit beta-3; CK II beta-3", "protein_names_refseq": "casein kinase II beta chain 3", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G60250)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "10535927;11130713;16926165;19509278;21330376;27862469;28011693;9724822", "class_list": "", "function": "Plays a complex role in regulating the basal catalytic activity of the alpha subunit., [UniProtKB, UniProtKB, UniProtKB]; Plays a complex role in regulating the basal catalytic activity of the alpha subunit. The tetrameric holoenzyme CK2, composed of two alpha and two beta subunits, phosphorylates the transcription factor PIF1 after an exposure to light, resulting in a proteasome-dependent degradation of PIF1 and promotion of photomorphogenesis (PubMed:21330376). CK2 phosphorylates translation initiation factors. May participate in the regulation of the initiation of translation (PubMed:19509278). Stimulates the binding of CCA1 to promoters (Probable)., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q24JI1", "ec_number_list": [], "go_molecular_function": "GO:0019887 protein kinase regulator activity;GO:0016301 kinase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005829 cytosol;GO:0005956 protein kinase CK2 complex", "go_biological_process": "GO:0042752 regulation of circadian rhythm", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "O81275-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q0PCS3-1", "uniprot_id": [ { "id": "CHR25_ARATH", "url": "https://www.uniprot.org/uniprot/Q0PCS3", "type": "external" } ], "mass": 101858.0, "length": 910, "protein_name": "Protein CHROMATIN REMODELING 25", "gene_name": "CHR25; RAD54", "organism": "Arabidopsis", "refseq_name": "DNA repair/recombination protein", "refseq_ac": [ { "id": "NP_001189933", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001189933", "type": "external" } ], "gene_names_uniprotkb": "CHR25; RAD54; ATRAD54; CHR25; MVI11.13; RAD54; homolog of RAD54", "gene_names_refseq": "ATRAD54; CHR25; RAD54; homolog of RAD54", "protein_names_uniprotkb": "Protein CHROMATIN REMODELING 25; 3.6.4.-; AtCHR25; AtRAD54; DNA repair and recombination protein RAD54", "protein_names_refseq": "DNA repair/recombination protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G19210)", "pathway_count": 1, "publication_count": 14, "publication_id_list": "10907853;11130713;16547115;17227544;18430956;18463617;20399886;20466843;21557702;22171001;22683605;22860689;24265739;27862469", "class_list": "", "function": "Dissociates RAD51 from nucleoprotein filaments formed on dsDNA. Could be involved in the turnover of RAD51 protein-dsDNA filaments. Addition of RAD54 overcomes inhibition of DNA strand exchange by RAD51 bound to substrate dsDNA. Species preference in the RAD51 dissociation and DNA strand exchange assays underlines the importance of specific RAD54-RAD51 interactions. RAD51 is unable to release dsDNA upon ATP hydrolysis, leaving it stuck on the heteroduplex DNA product after DNA strand exchange (By similarity). Involved in DNA repair and mitotic recombination (PubMed:16547115, PubMed:17227544, PubMed:18430956). Functions in the homologous recombinational DNA repair (RAD52) pathway (PubMed:16547115, PubMed:17227544, PubMed:18430956). Required for synthesis-dependent strand annealing (SDSA) during double-strand break repair (PubMed:22860689)., [UniProtKB, UniProtKB, PubMed, PubMed, PubMed, PubMed]; Facilitates geminiviral replication (e.g. geminivirus mungbean yellow mosaic virus (MYMV) and tomato leaf curl virus (ToLCV))., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "F4JB43;Q9LJK7", "ec_number_list": [], "go_molecular_function": "GO:0003677 DNA binding;GO:0005524 ATP binding;GO:0016787 hydrolase activity;GO:0004386 helicase activity;GO:0015616 DNA translocase activity", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0010332 response to gamma radiation;GO:0051301 cell division;GO:0000724 double-strand break repair via homologous recombination;GO:0007131 reciprocal meiotic recombination;GO:0071480 cellular response to gamma radiation", "synthesized_glycan_count": 0, "hit_score": 1.5, "record_id": "Q0PCS3-1", "record_type": "protein", "filter_code": "0000000.0000101.010000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q0WRJ2-1", "uniprot_id": [ { "id": "KDSRA_ARATH", "url": "https://www.uniprot.org/uniprot/Q0WRJ2", "type": "external" } ], "mass": 34980.0, "length": 326, "protein_name": "3-dehydrosphinganine reductase TSC10A", "gene_name": "TSC10A", "organism": "Arabidopsis", "refseq_name": "NAD(P)-binding Rossmann-fold superfamily protein", "refseq_ac": [ { "id": "NP_187257", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_187257", "type": "external" } ], "gene_names_uniprotkb": "TSC10A; F24F17.4; F24F17_4", "gene_names_refseq": "F24F17.4; F24F17_4; TSC10A", "protein_names_uniprotkb": "3-dehydrosphinganine reductase TSC10A; 1.1.1.102; 3-ketodihydrosphingosine reductase; 3-ketosphinganine reductase; KDS reductase", "protein_names_refseq": "NAD(P)-binding Rossmann-fold superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G06060)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "11130713;14593172;21421810;25561503;27862469", "class_list": "", "function": "Catalyzes the reduction of 3'-oxosphinganine (3-ketodihydrosphingosine/KDS) to sphinganine (dihydrosphingosine/DHS), the second step of de novo sphingolipid biosynthesis. In plants, sphingolipids seems to play a critical role in mineral ion homeostasis, most likely through their involvement in the ion transport functionalities of membrane systems in the root. Lacks stereospecificity and can also produce L-threo-DHS in addition to D-erythro-DHS., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9M7S9", "ec_number_list": [ { "id": "1.1.1.102", "url": "https://www.rhea-db.org/rhea/?query=ec:1.1.1.102", "type": "external" } ], "go_molecular_function": "GO:0047560 3-dehydrosphinganine reductase activity;GO:0070402 NADPH binding;GO:0000166 nucleotide binding", "go_cellular_component": "GO:0005789 endoplasmic reticulum membrane;GO:0009507 chloroplast", "go_biological_process": "GO:0006666 3-keto-sphinganine metabolic process;GO:0030148 sphingolipid biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q0WRJ2-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q0WVR4-1", "uniprot_id": [ { "id": "JMJ32_ARATH", "url": "https://www.uniprot.org/uniprot/Q0WVR4", "type": "external" } ], "mass": 39123.0, "length": 345, "protein_name": "Lysine-specific demethylase JMJ32", "gene_name": "JMJ32", "organism": "Arabidopsis", "refseq_name": "2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein", "refseq_ac": [ { "id": "NP_190174", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_190174", "type": "external" } ], "gene_names_uniprotkb": "JMJ32; F16L2.90; JUMONJI 32", "gene_names_refseq": "JMJ32; JUMONJI 32", "protein_names_uniprotkb": "Lysine-specific demethylase JMJ32; 1.14.11.68; AtJMJ32; Jumonji domain-containing protein 32; Lysine-specific histone demethylase JMJ32; Protein JUMONJI 32; [histone H3]-trimethyl-L-lysine(27) monodemethylase JMJ32", "protein_names_refseq": "2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G45880)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "11130713;18713399;25267112;27862469;30859592;30983495;33324437", "class_list": "", "function": "Histone demethylase that demethylates 'Lys-27' (H3K27me) of histone H3 with a specific activity for H3K27me3 and H3K27me2, and involved in the regulation of gene expression (PubMed:25267112, PubMed:33324437). No activity on H3K27me1 (PubMed:25267112). Together with JMJ30, regulates the flowering-repressor FLOWERING LOCUS C (FLC) locus by removing the repressive histone modification H3 lysine 27 trimethylation (H3K27me3), especially at elevated temperatures (e.g. 29 degrees Celsius), thus preventing extreme precocious flowering (PubMed:25267112). JMJ30 and JMJ32 are regulators involved in the integration of abscisic acid (ABA) and brassinosteroids (BR) signaling pathways (PubMed:33324437). Together with JMJ30, controls ABA-mediated growth arrest during the post-germination stage in unfavorable conditions, and responses to ABA during root development, via the removal of repressive histone mark (H3K27me3) from the SnRK2.8 promoter, thus promoting SnRK2.8 expression and subsequent kinase-dependent ABI3 activation (PubMed:30859592, PubMed:30983495). In addition, removes the repressive histone marks (H3K27me3) from the BZR1 locus in response to stress and ABA, thus activating the BR signaling pathway which, in turn, inhibits the ABA signaling pathway (PubMed:33324437)., [UniProtKB, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9LZU2", "ec_number_list": [ { "id": "1.14.11.-", "url": "https://www.rhea-db.org/rhea/?query=ec:1.14.11.-", "type": "external" }, { "id": "1.14.11.68", "url": "https://www.rhea-db.org/rhea/?query=ec:1.14.11.68", "type": "external" }, { "id": "1.14.11.27", "url": "https://www.rhea-db.org/rhea/?query=ec:1.14.11.27", "type": "external" }, { "id": "1.14.11.69", "url": "https://www.rhea-db.org/rhea/?query=ec:1.14.11.69", "type": "external" } ], "go_molecular_function": "GO:0004175 endopeptidase activity;GO:0046872 metal ion binding;GO:0016706 2-oxoglutarate-dependent dioxygenase activity;GO:0071558 histone H3K27me2/H3K27me3 demethylase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005783 endoplasmic reticulum", "go_biological_process": "GO:0009266 response to temperature stimulus;GO:0045814 negative regulation of gene expression, epigenetic;GO:2000028 regulation of photoperiodism, flowering;GO:0009737 response to abscisic acid;GO:0009787 regulation of abscisic acid-activated signaling pathway", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q0WVR4-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q27IK7-1", "uniprot_id": [ { "id": "KN12C_ARATH", "url": "https://www.uniprot.org/uniprot/Q27IK7", "type": "external" } ], "mass": 233879.0, "length": 2066, "protein_name": "Kinesin-like protein KIN-12C", "gene_name": "KIN12C; POK1", "organism": "Arabidopsis", "refseq_name": "phragmoplast orienting kinesin 1", "refseq_ac": [ { "id": "NP_188362", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_188362", "type": "external" } ], "gene_names_uniprotkb": "KIN12C; POK1; MGD8.20; POK1", "gene_names_refseq": "POK1; phragmoplast orienting kinesin 1", "protein_names_uniprotkb": "Kinesin-like protein KIN-12C; Phragmoplast orienting kinesin 1", "protein_names_refseq": "phragmoplast orienting kinesin 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G17360)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "10819329;11130713;11472632;16448571;16530461;16682350;19011093;21172800;22038119;27862469", "class_list": "", "function": "Involved in the spatial control of cytokinesis by a proper phragmoplast guidance. Localizes TAN to the cortical division sites (CDS) during cytokinesis via direct binding., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9LUT5", "ec_number_list": [], "go_molecular_function": "GO:0005524 ATP binding;GO:0008017 microtubule binding;GO:0003777 microtubule motor activity", "go_cellular_component": "GO:0005874 microtubule;GO:0032153 cell division site;GO:0009524 phragmoplast", "go_biological_process": "GO:0000281 mitotic cytokinesis;GO:0007018 microtubule-based movement;GO:0000911 cytokinesis by cell plate formation", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "Q27IK7-1", "record_type": "protein", "filter_code": "0000000.0000101.010000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "P59220-1", "uniprot_id": [ { "id": "CALM7_ARATH", "url": "https://www.uniprot.org/uniprot/P59220", "type": "external" } ], "mass": 16848.0, "length": 149, "protein_name": "Calmodulin-7", "gene_name": "CAM7", "organism": "Arabidopsis", "refseq_name": "calmodulin 7", "refseq_ac": [ { "id": "NP_189967", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_189967", "type": "external" } ], "gene_names_uniprotkb": "CAM7; AtCAM7; CALMODULIN 7; T28A8.100; Z-box Binding Factor 3; ZBF3; calmodulin 7", "gene_names_refseq": "AtCAM7; CALMODULIN 7; CAM7; Z-box Binding Factor 3; ZBF3; calmodulin 7", "protein_names_uniprotkb": "Calmodulin-7; CaM-7", "protein_names_refseq": "calmodulin 7", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G43810)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "11130713;11855649;18463617;20466843;21419340;23111157;23776212;26315018;27862469;30833711", "class_list": "", "function": "Calmodulin mediates the control of a large number of enzymes, ion channels and other proteins by Ca(2+) (PubMed:21419340). Among the enzymes to be stimulated by the calmodulin-Ca(2+) complex are a number of protein kinases and phosphatases (PubMed:21419340). Activates MPK8 in vitro (PubMed:21419340). Required during nonhost resistance (NHR) to the nonadapted fungal pathogens Phakopsora pachyrhizi and Blumeria graminis f.sp. hordei, probably via its Ca(2+)-dependent interaction with ABCG36 (PubMed:26315018)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 5, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0005509 calcium ion binding;GO:0030234 enzyme regulator activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005829 cytosol;GO:0005886 plasma membrane", "go_biological_process": "GO:0005513 detection of calcium ion;GO:0050832 defense response to fungus;GO:0010099 regulation of photomorphogenesis", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "P59220-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "P49078-1", "uniprot_id": [ { "id": "ASNS1_ARATH", "url": "https://www.uniprot.org/uniprot/P49078", "type": "external" } ], "mass": 65621.0, "length": 584, "protein_name": "Asparagine synthetase [glutamine-hydrolyzing] 1", "gene_name": "ASN1", "organism": "Arabidopsis", "refseq_name": "glutamine-dependent asparagine synthase 1", "refseq_ac": [ { "id": "NP_190318", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_190318", "type": "external" } ], "gene_names_uniprotkb": "ASN1; AT-ASN1; DARK INDUCIBLE 6; DIN6; T21L8.90", "gene_names_refseq": "ARABIDOPSIS THALIANA GLUTAMINE-DEPENDENT ASPARAGINE SYNTHASE 1; ASN1; AT-ASN1; DARK INDUCIBLE 6; DIN6; GLUTAMINE-DEPENDENT ASPARAGINE SYNTHETASE; glutamine-dependent asparagine synthase 1", "protein_names_uniprotkb": "Asparagine synthetase [glutamine-hydrolyzing] 1; 6.3.5.4; Glutamine-dependent asparagine synthetase 1; Protein DARK INDUCIBLE 6", "protein_names_refseq": "glutamine-dependent asparagine synthase 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G47340)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "11130713;12805621;14593172;27862469;7846154;9881155", "class_list": "", "function": "Essential for nitrogen assimilation, distribution and remobilization within the plant via the phloem., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [ { "id": "6.3.5.4", "url": "https://www.rhea-db.org/rhea/?query=ec:6.3.5.4", "type": "external" } ], "go_molecular_function": "GO:0005524 ATP binding;GO:0004066 asparagine synthase (glutamine-hydrolyzing) activity;GO:0016874 ligase activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005829 cytosol", "go_biological_process": "GO:0009749 response to glucose;GO:0009744 response to sucrose;GO:0070981 L-asparagine biosynthetic process;GO:0009750 response to fructose;GO:0009063 amino acid catabolic process", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "P49078-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1PET6-1", "uniprot_id": [ { "id": "ICML2_ARATH", "url": "https://www.uniprot.org/uniprot/Q1PET6", "type": "external" } ], "mass": 47010.0, "length": 422, "protein_name": "Probable isoprenylcysteine alpha-carbonyl methylesterase ICMEL2", "gene_name": "ICME-LIKE2; ICMEL2", "organism": "Arabidopsis", "refseq_name": "alpha/beta-Hydrolases superfamily protein", "refseq_ac": [ { "id": "NP_001118556", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001118556", "type": "external" } ], "gene_names_uniprotkb": "ICME-LIKE2; ICMEL2; F16B3.4; F16B3_4", "gene_names_refseq": "F16B3.4; F16B3_4; ICME-LIKE2; Isoprenylcysteine methylesterase-like 2", "protein_names_uniprotkb": "Probable isoprenylcysteine alpha-carbonyl methylesterase ICMEL2; 3.1.1.n2; Isoprenylcysteine methylesterase-like protein 2", "protein_names_refseq": "alpha/beta-Hydrolases superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G02410)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "11130713;17147637;20868530;27862469", "class_list": "", "function": "Catalyzes the demethylation of isoprenylcysteine methylesters (By similarity). May act as a negative regulator of ABA signaling (PubMed:20868530)., [UniProtKB, PubMed, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0MEU1;B3H6W3;Q9M899", "ec_number_list": [ { "id": "3.1.1.n2", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.1.n2", "type": "external" } ], "go_molecular_function": "GO:0010296 prenylcysteine methylesterase activity;GO:0016787 hydrolase activity", "go_cellular_component": "GO:0000139 Golgi membrane;GO:0005576 extracellular region;GO:0005789 endoplasmic reticulum membrane", "go_biological_process": "GO:0009737 response to abscisic acid", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "Q1PET6-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "P53780-1", "uniprot_id": [ { "id": "METC_ARATH", "url": "https://www.uniprot.org/uniprot/P53780", "type": "external" } ], "mass": 50430.0, "length": 464, "protein_name": "Cystathionine beta-lyase, chloroplastic", "gene_name": "CBL", "organism": "Arabidopsis", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "CBL; F24I3.130; cystathionine beta-lyase", "gene_names_refseq": "", "protein_names_uniprotkb": "Cystathionine beta-lyase, chloroplastic; 4.4.1.13; Beta-cystathionase; CBL; Cysteine lyase; Cysteine-S-conjugate beta-lyase", "protein_names_refseq": "", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G57050)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "11130713;11402193;14593172;27862469;31002461;35472754;8541513", "class_list": "", "function": "Catalyzes the penultimate step in the de novo biosynthesis of methionine (PubMed:11402193, PubMed:31002461, PubMed:8541513). Its role in methionine metabolism may affect plant development in different organs, probably by modifying plant auxin transport (PubMed:31002461). Its cysteine desulfhydrase activity may be involved in hydrogen sulfur production using L-cysteine as a substrate (PubMed:35472754)., [UniProtKB, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q8VZL8", "ec_number_list": [ { "id": "4.4.1.13", "url": "https://www.rhea-db.org/rhea/?query=ec:4.4.1.13", "type": "external" } ], "go_molecular_function": "GO:0060090 molecular adaptor activity;GO:0030170 pyridoxal phosphate binding;GO:0042803 protein homodimerization activity;GO:0016846 carbon-sulfur lyase activity;GO:0047804 cysteine-S-conjugate beta-lyase activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0009507 chloroplast;GO:0009570 chloroplast stroma", "go_biological_process": "GO:0006555 methionine metabolic process;GO:0019346 transsulfuration;GO:0019279 L-methionine biosynthetic process from L-homoserine via cystathionine;GO:0071266 'de novo' L-methionine biosynthetic process;GO:0009086 methionine biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "P53780-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q0WPQ2-1", "uniprot_id": [ { "id": "ETR2_ARATH", "url": "https://www.uniprot.org/uniprot/Q0WPQ2", "type": "external" } ], "mass": 85613.0, "length": 773, "protein_name": "Ethylene receptor 2", "gene_name": "ETR2", "organism": "Arabidopsis", "refseq_name": "Signal transduction histidine kinase, hybrid-type, ethylene sensor", "refseq_ac": [ { "id": "NP_001326955", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001326955", "type": "external" } ], "gene_names_uniprotkb": "ETR2; K14B15.9; ethylene response 2", "gene_names_refseq": "ETR2; ethylene response 2", "protein_names_uniprotkb": "Ethylene receptor 2; 2.7.11.-; AtETR2; Protein ETHYLENE RESPONSE 2; Protein ETR2", "protein_names_refseq": "Signal transduction histidine kinase, hybrid-type, ethylene sensor", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G23150)", "pathway_count": 1, "publication_count": 15, "publication_id_list": "10819329;11130713;15358768;15703053;17272265;17595158;18463617;18577522;20466843;21631530;25561503;26207341;27862469;9576967;9707532", "class_list": "", "function": "Ethylene receptor related to bacterial two-component regulators. Acts as a redundant negative regulator of ethylene signaling., [UniProtKB, PubMed, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 3, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O82429;Q9LTD5", "ec_number_list": [], "go_molecular_function": "GO:0004674 protein serine/threonine kinase activity;GO:0005524 ATP binding;GO:0046872 metal ion binding;GO:0000155 phosphorelay sensor kinase activity;GO:0038199 ethylene receptor activity", "go_cellular_component": "GO:0005576 extracellular region;GO:0005783 endoplasmic reticulum;GO:0005789 endoplasmic reticulum membrane", "go_biological_process": "GO:0071456 cellular response to hypoxia;GO:0010105 negative regulation of ethylene-activated signaling pathway;GO:0009873 ethylene-activated signaling pathway", "synthesized_glycan_count": 0, "hit_score": 1.6, "record_id": "Q0WPQ2-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q0WVH0-1", "uniprot_id": [ { "id": "RBLOT_ARATH", "url": "https://www.uniprot.org/uniprot/Q0WVH0", "type": "external" } ], "mass": 68367.0, "length": 594, "protein_name": "Protein REBELOTE", "gene_name": "RBL", "organism": "Arabidopsis", "refseq_name": "Noc2p family", "refseq_ac": [ { "id": "NP_567023", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_567023", "type": "external" } ], "gene_names_uniprotkb": "RBL; REBELOTE; T22E16.170", "gene_names_refseq": "RBL; REBELOTE", "protein_names_uniprotkb": "Protein REBELOTE", "protein_names_refseq": "Noc2p family", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G55510)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "11130713;18441215;27862469;30338215", "class_list": "", "function": "Collaboratively with CYP40/SQN and ULT1, influences floral meristem (FM) determinacy in an AGAMOUS and SUPERMAN-dependent manner, thus contributing to the floral developmental homeostasis., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q8LDH9;Q9M2S8", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005634 nucleus;GO:0005654 nucleoplasm;GO:0005730 nucleolus;GO:0030690 Noc1p-Noc2p complex;GO:0030691 Noc2p-Noc3p complex", "go_biological_process": "GO:0042273 ribosomal large subunit biogenesis;GO:0010582 floral meristem determinacy", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "Q0WVH0-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q0WRJ7-1", "uniprot_id": [ { "id": "FK202_ARATH", "url": "https://www.uniprot.org/uniprot/Q0WRJ7", "type": "external" } ], "mass": 27192.0, "length": 242, "protein_name": "Peptidyl-prolyl cis-trans isomerase FKBP20-2, chloroplastic", "gene_name": "FKBP20-2", "organism": "Arabidopsis", "refseq_name": "FKBP-like peptidyl-prolyl cis-trans isomerase family protein", "refseq_ac": [ { "id": "NP_567098", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_567098", "type": "external" } ], "gene_names_uniprotkb": "FKBP20-2; T8B10.30", "gene_names_refseq": "", "protein_names_uniprotkb": "Peptidyl-prolyl cis-trans isomerase FKBP20-2, chloroplastic; 5.2.1.8; AtFKBP20-2; FK506-binding protein 20-2; Immunophilin FKBP20-2; PPIase FKBP20-2; Rotamase", "protein_names_refseq": "FKBP-like peptidyl-prolyl cis-trans isomerase family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G60370)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "11130713;11719511;11826309;15047905;16894144;18431481;25412899;25561503;27862469", "class_list": "", "function": "PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides (By similarity). Involved in the accumulation of the PSII complex., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 2, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9M222", "ec_number_list": [ { "id": "5.2.1.8", "url": "https://www.rhea-db.org/rhea/?query=ec:5.2.1.8", "type": "external" }, { "id": "2.3.2.27", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.2.27", "type": "external" } ], "go_molecular_function": "GO:0016491 oxidoreductase activity;GO:0003755 peptidyl-prolyl cis-trans isomerase activity", "go_cellular_component": "GO:0005576 extracellular region;GO:0009507 chloroplast;GO:0009543 chloroplast thylakoid lumen;GO:0009579 thylakoid;GO:0031977 thylakoid lumen", "go_biological_process": "GO:0010207 photosystem II assembly", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "Q0WRJ7-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q0WP44-1", "uniprot_id": [ { "id": "HASTY_ARATH", "url": "https://www.uniprot.org/uniprot/Q0WP44", "type": "external" } ], "mass": 133128.0, "length": 1202, "protein_name": "Protein HASTY 1", "gene_name": "HST1; HST", "organism": "Arabidopsis", "refseq_name": "ARM repeat superfamily protein", "refseq_ac": [ { "id": "NP_187155", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_187155", "type": "external" } ], "gene_names_uniprotkb": "HST1; HST; HASTY 1; HASTY; HST1; T9J14.1; T9J14_1", "gene_names_refseq": "HASTY 1; HASTY; HST1; HST; T9J14.1; T9J14_1", "protein_names_uniprotkb": "Protein HASTY 1; Protein HASTY", "protein_names_refseq": "ARM repeat superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G05040)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "11130713;12620976;15738428;16914499;22223895;27862469", "class_list": "", "function": "Nucleocytoplasmic transporter involved in the nuclear export of microRNAs (miRNAs). Required for several miRNAs accumulation. Specifically required for miR156 accumulation which targets SPL3, SPL4 and SPL5 transcription factors. Involved in plant development through its role in miRNAs processing. Required for vegetative phase change and vegetative to reproductive phase transition. Functionally dependent on RAN1 binding. Does not seem to be involved in small interfering RNAs (siRNAs) processing., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 3, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q84UC4;Q9CAW7", "ec_number_list": [], "go_molecular_function": "GO:0003723 RNA binding;GO:0005049 nuclear export signal receptor activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm", "go_biological_process": "GO:0031047 regulatory ncRNA-mediated gene silencing;GO:0006611 protein export from nucleus;GO:0006405 RNA export from nucleus;GO:0009910 negative regulation of flower development;GO:0009944 polarity specification of adaxial/abaxial axis", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q0WP44-1", "record_type": "protein", "filter_code": "0000000.0100101.010000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q39009-1", "uniprot_id": [ { "id": "DMC1_ARATH", "url": "https://www.uniprot.org/uniprot/Q39009", "type": "external" } ], "mass": 37513.0, "length": 344, "protein_name": "Meiotic recombination protein DMC1 homolog", "gene_name": "DMC1", "organism": "Arabidopsis", "refseq_name": "DNA repair (Rad51) family protein", "refseq_ac": [ { "id": "NP_188928", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_188928", "type": "external" } ], "gene_names_uniprotkb": "DMC1; ARLIM15; ATDMC1; F5N5.6; LIM15", "gene_names_refseq": "ARABIDOPSIS HOMOLOG OF LILY MESSAGES INDUCED AT MEIOSIS 15; ARABIDOPSIS THALIANA DISRUPTION OF MEIOTIC CONTROL 1; ARLIM15; ATDMC1; DISRUPTION OF MEIOTIC CONTROL 1; DMC1", "protein_names_uniprotkb": "Meiotic recombination protein DMC1 homolog; AtDMC1", "protein_names_refseq": "DNA repair (Rad51) family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G22880)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "10488231;10907853;11130713;16415210;17785529;23300481;27862469;7584052;9025299;9520262", "class_list": "", "function": "May participate in meiotic recombination, specifically in homologous strand assimilation, which is required for the resolution of meiotic double-strand breaks (PubMed:10488231, PubMed:23300481). Mediates interhomolog recombination during meiosis (PubMed:17785529)., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "P93001;Q4V3A9;Q9LIL0", "ec_number_list": [], "go_molecular_function": "GO:0005524 ATP binding;GO:0003690 double-stranded DNA binding;GO:0003697 single-stranded DNA binding;GO:0008094 ATP-dependent activity, acting on DNA;GO:0000150 DNA strand exchange activity", "go_cellular_component": "GO:0000794 condensed nuclear chromosome;GO:0005634 nucleus", "go_biological_process": "GO:0006312 mitotic recombination;GO:0006259 DNA metabolic process;GO:0007131 reciprocal meiotic recombination;GO:0051321 meiotic cell cycle;GO:0000730 DNA recombinase assembly", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "Q39009-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "P46607-1", "uniprot_id": [ { "id": "HGL2_ARATH", "url": "https://www.uniprot.org/uniprot/P46607", "type": "external" } ], "mass": 83207.0, "length": 747, "protein_name": "Homeobox-leucine zipper protein GLABRA 2", "gene_name": "GL2", "organism": "Arabidopsis", "refseq_name": "HD-ZIP IV family of homeobox-leucine zipper protein with lipid-binding START domain-containing protein", "refseq_ac": [ { "id": "NP_565223", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_565223", "type": "external" } ], "gene_names_uniprotkb": "GL2; ATHB10; F19K16.20; F19K16_20; GLABRA 2; HOMEOBOX PROTEIN GLABRA 2", "gene_names_refseq": "F19K16.20; F19K16_20; GL2; GLABRA 2; HOMEOBOX PROTEIN GLABRA 2", "protein_names_uniprotkb": "Homeobox-leucine zipper protein GLABRA 2; HD-ZIP protein ATHB-10; Homeobox-leucine zipper protein ATHB-10; Protein GLABRA2", "protein_names_refseq": "HD-ZIP IV family of homeobox-leucine zipper protein with lipid-binding START domain-containing protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G79840)", "pathway_count": 1, "publication_count": 15, "publication_id_list": "10809443;11130712;11844112;14593172;16514561;16778018;17450124;21883555;26017690;26486447;27862469;28526410;7926739;8620852;8811855", "class_list": "", "function": "Transcription factor involved in the determination of epidermal cell identity (Probable). Required for correct morphological development and maturation of trichomes (PubMed:7926739). Regulates the frequency of trichome initiation and determines trichome spacing (PubMed:11844112). Acts as a negative factor for root hair development (PubMed:26486447, PubMed:8620852, PubMed:8811855). Required for ectopic repression of root hair development in a subset of epidermal cells (PubMed:8811855). May suppress hair formation in root epidermis by promoting differentiation into hairless epidermal cells (PubMed:8620852). Directly suppresses the bHLH transcription factor genes, RHD6, RSL1, RSL2, LRL1, and LRL2, which have diverse functions in root hair development (PubMed:26486447). Required for normal development of seed coat mucilage (PubMed:21883555, PubMed:7926739). Involved in the control of seed oil accumulation (PubMed:16514561, PubMed:21883555). Acts as a negative regulator of anthocyanin biosynthesis (PubMed:26017690). May directly repress the expression of some component genes from the MYB-bHLH-WD40 (MBW) transcriptional activator complex (PubMed:26017690). The MBW complex activates the transcription of late biosynthesis genes in the flavonoid pathway, leading to the production of anthocyanins (Probable)., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 3, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q39018;Q9C5F1", "ec_number_list": [], "go_molecular_function": "GO:0003700 DNA-binding transcription factor activity;GO:0008289 lipid binding;GO:0000976 transcription cis-regulatory region binding;GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific;GO:0043565 sequence-specific DNA binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0010062 negative regulation of trichoblast fate specification;GO:0090628 plant epidermal cell fate specification", "synthesized_glycan_count": 0, "hit_score": 1.6, "record_id": "P46607-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q38951-1", "uniprot_id": [ { "id": "2AAG_ARATH", "url": "https://www.uniprot.org/uniprot/Q38951", "type": "external" } ], "mass": 65517.0, "length": 587, "protein_name": "Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A gamma isoform", "gene_name": "PP2AA3", "organism": "Arabidopsis", "refseq_name": "protein phosphatase 2A subunit A3", "refseq_ac": [ { "id": "NP_001184981", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001184981", "type": "external" } ], "gene_names_uniprotkb": "PP2AA3; DF2; PR65; T6J4.8; T6J4_8", "gene_names_refseq": "65 KDA REGULATORY SUBUNIT OF PROTEIN PHOSPHATASE 2A; PP2AA3; PR65; T6J4.8; T6J4_8; protein phosphatase 2A subunit A3", "protein_names_uniprotkb": "Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A gamma isoform; AtA gamma; PP2A, subunit A, gamma isoform", "protein_names_refseq": "protein phosphatase 2A subunit A3", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G13320)", "pathway_count": 1, "publication_count": 11, "publication_id_list": "11130712;14593172;14973165;16166256;16640601;22223895;22404109;23328941;26175513;27862469;7811971", "class_list": "", "function": "The A subunit of protein phosphatase 2A serves as a scaffolding molecule to coordinate the assembly of the catalytic subunit and a variable regulatory B subunit. Involved during developmental process such as seedling and floral developments. Seems to act as a negative regulator of PP2A catalytic activity., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q8LPH9;Q9FX65", "ec_number_list": [], "go_molecular_function": "GO:0019888 protein phosphatase regulator activity", "go_cellular_component": "GO:0005576 extracellular region;GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005829 cytosol;GO:0005886 plasma membrane", "go_biological_process": "GO:0042325 regulation of phosphorylation", "synthesized_glycan_count": 0, "hit_score": 1.2, "record_id": "Q38951-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "C0SUW7-1", "uniprot_id": [ { "id": "ARID6_ARATH", "url": "https://www.uniprot.org/uniprot/C0SUW7", "type": "external" } ], "mass": 44265.0, "length": 398, "protein_name": "AT-rich interactive domain-containing protein 6", "gene_name": "ARID3; ARID6", "organism": "Arabidopsis", "refseq_name": "ARID/BRIGHT DNA-binding domain-containing protein", "refseq_ac": [ { "id": "NP_173515", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_173515", "type": "external" } ], "gene_names_uniprotkb": "ARID3; ARID6; F9H16.11; F9H16_11", "gene_names_refseq": "F9H16.11; F9H16_11", "protein_names_uniprotkb": "AT-rich interactive domain-containing protein 6; ARID domain-containing protein 6", "protein_names_refseq": "ARID/BRIGHT DNA-binding domain-containing protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G20910)", "pathway_count": 1, "publication_count": 3, "publication_id_list": "11130712;25561503;27862469", "class_list": "", "function": "", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9SYP7", "ec_number_list": [], "go_molecular_function": "GO:0003680 minor groove of adenine-thymine-rich DNA binding;GO:0003677 DNA binding;GO:0000976 transcription cis-regulatory region binding", "go_cellular_component": "GO:0005634 nucleus;GO:0000118 histone deacetylase complex", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006357 regulation of transcription by RNA polymerase II;GO:0019760 glucosinolate metabolic process", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "C0SUW7-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q0WVW7-1", "uniprot_id": [ { "id": "RQL5_ARATH", "url": "https://www.uniprot.org/uniprot/Q0WVW7", "type": "external" } ], "mass": 100755.0, "length": 911, "protein_name": "ATP-dependent DNA helicase Q-like 5", "gene_name": "RECQL5", "organism": "Arabidopsis", "refseq_name": "DEAD/DEAH box RNA helicase family protein", "refseq_ac": [ { "id": "NP_174109", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_174109", "type": "external" } ], "gene_names_uniprotkb": "RECQL5; F28L5.4; F28L5_4; RECQ5; RQL5", "gene_names_refseq": "F28L5.4; F28L5_4", "protein_names_uniprotkb": "ATP-dependent DNA helicase Q-like 5; 5.6.2.4; AtRecQ5; AtRecQl5; DNA 3'-5' helicase RecQ5; RecQ-like protein 5", "protein_names_refseq": "DEAD/DEAH box RNA helicase family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G27880)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "11058127;11130712;12856935;16371241;22060019;24265739;27862469", "class_list": "", "function": "3'-5' DNA helicase that may play a role in the repair of DNA., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q8W028;Q9C6N0", "ec_number_list": [ { "id": "3.1.-.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.-.-", "type": "external" }, { "id": "5.6.2.3", "url": "https://www.rhea-db.org/rhea/?query=ec:5.6.2.3", "type": "external" }, { "id": "3.6.4.12", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.4.12", "type": "external" }, { "id": "3.6.-.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.-.-", "type": "external" }, { "id": "2.7.7.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.7.-", "type": "external" }, { "id": "3.6.4.13", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.4.13", "type": "external" }, { "id": "5.6.2.4", "url": "https://www.rhea-db.org/rhea/?query=ec:5.6.2.4", "type": "external" }, { "id": "5.6.2.-", "url": "https://www.rhea-db.org/rhea/?query=ec:5.6.2.-", "type": "external" }, { "id": "3.6.1.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.1.-", "type": "external" }, { "id": "3.6.4.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.4.-", "type": "external" }, { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.7.4.3", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.4.3", "type": "external" }, { "id": "5.6.2.5", "url": "https://www.rhea-db.org/rhea/?query=ec:5.6.2.5", "type": "external" }, { "id": "7.2.2.-", "url": "https://www.rhea-db.org/rhea/?query=ec:7.2.2.-", "type": "external" }, { "id": "3.6.4.6", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.4.6", "type": "external" }, { "id": "3.6.1.25", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.1.25", "type": "external" } ], "go_molecular_function": "GO:0043138 3'-5' DNA helicase activity;GO:0003677 DNA binding;GO:0005524 ATP binding;GO:0016887 ATP hydrolysis activity;GO:0009378 four-way junction helicase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005694 chromosome", "go_biological_process": "GO:0006260 DNA replication;GO:0000724 double-strand break repair via homologous recombination;GO:0042631 cellular response to water deprivation;GO:0006310 DNA recombination", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q0WVW7-1", "record_type": "protein", "filter_code": "0000000.0000101.010000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "P46640-1", "uniprot_id": [ { "id": "KNAT2_ARATH", "url": "https://www.uniprot.org/uniprot/P46640", "type": "external" } ], "mass": 35638.0, "length": 310, "protein_name": "Homeobox protein knotted-1-like 2", "gene_name": "KNAT2", "organism": "Arabidopsis", "refseq_name": "homeobox knotted-like protein", "refseq_ac": [ { "id": "NP_177208", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_177208", "type": "external" } ], "gene_names_uniprotkb": "KNAT2; ARABIDOPSIS THALIANA KN 1; ATK1; F24J13.8; F24J13_8", "gene_names_refseq": "ARABIDOPSIS THALIANA KN 1; ATK1; F24J13.8; F24J13_8; KNAT2; KNOTTED-like from Arabidopsis thaliana 2", "protein_names_uniprotkb": "Homeobox protein knotted-1-like 2; Protein ATK1; Protein KNAT2", "protein_names_refseq": "homeobox knotted-like protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G70510)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "11130712;11701881;15781858;17873098;22440515;27402171;27862469;7647303;7866029", "class_list": "", "function": "May play a role in meristem function, and may be involved in maintaining cells in an undifferentiated, meristematic state. Probably binds to the DNA sequence 5'-TGAC-3'., [UniProtKB]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "Q42414;Q9CAL4", "ec_number_list": [], "go_molecular_function": "GO:0003700 DNA-binding transcription factor activity;GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding;GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific;GO:0003677 DNA binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006357 regulation of transcription by RNA polymerase II;GO:0009736 cytokinin-activated signaling pathway;GO:0010094 specification of carpel identity", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "P46640-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000001001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q39265-1", "uniprot_id": [ { "id": "ZFP6_ARATH", "url": "https://www.uniprot.org/uniprot/Q39265", "type": "external" } ], "mass": 21414.0, "length": 197, "protein_name": "Zinc finger protein 6", "gene_name": "SVL2; ZFP6", "organism": "Arabidopsis", "refseq_name": "zinc finger protein 6", "refseq_ac": [ { "id": "NP_176873", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_176873", "type": "external" } ], "gene_names_uniprotkb": "SVL2; ZFP6; F1O19.5; F1O19.8; F1O19_5; GDPDL1; SHV3-like 2; ZEP6", "gene_names_refseq": "F1O19.8; F1O19_8; ZFP6; zinc finger protein 6", "protein_names_uniprotkb": "Zinc finger protein 6", "protein_names_refseq": "zinc finger protein 6", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G67030)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "11130712;14593172;23506479;24808098;27862469;7599312", "class_list": "", "function": "Probable transcription factor required for the initiation of inflorescence trichomes in response to gibberellin and cytokinin. Acts upstream of GIS, GIS2, ZFP8, ZFP5 and the trichome initiation regulators GL1 and GL3 (PubMed:23506479). Acts as a negative regulator of abscisic acid (ABA) signaling during germination and early seedling development (PubMed:24808098)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [ { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "3.1.4.46", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.4.46", "type": "external" } ], "go_molecular_function": "GO:0003700 DNA-binding transcription factor activity;GO:0008270 zinc ion binding;GO:0000976 transcription cis-regulatory region binding;GO:0008889 glycerophosphodiester phosphodiesterase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0022626 cytosolic ribosome", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006355 regulation of DNA-templated transcription;GO:0009740 gibberellic acid mediated signaling pathway;GO:0009736 cytokinin-activated signaling pathway;GO:0009738 abscisic acid-activated signaling pathway", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q39265-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q39086-1", "uniprot_id": [ { "id": "SD17_ARATH", "url": "https://www.uniprot.org/uniprot/Q39086", "type": "external" } ], "mass": 95946.0, "length": 843, "protein_name": "Receptor-like serine/threonine-protein kinase SD1-7", "gene_name": "RK1; SD17", "organism": "Arabidopsis", "refseq_name": "receptor kinase 1", "refseq_ac": [ { "id": "NP_176755", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_176755", "type": "external" } ], "gene_names_uniprotkb": "RK1; SD17; ARK1; F1E22.15; F1E22_15; receptor kinase 1", "gene_names_refseq": "ARK1; F1E22.15; F1E22_15; RK1; receptor kinase 1", "protein_names_uniprotkb": "Receptor-like serine/threonine-protein kinase SD1-7; 2.7.11.1; Arabidopsis thaliana receptor kinase 1; S-domain-1 (SD1) receptor kinase 7; SD1-7", "protein_names_refseq": "receptor kinase 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G65790)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "11130712;11814694;16668863;18552232;25561503;27862469;8811866", "class_list": "", "function": "Involved in the regulation of cellular expansion and differentiation. Mediates subcellular relocalization of PUB9 from nucleus to plasma membrane in a protein-phosphorylation-dependent manner. May be involved in the abscisic acid-mediated signaling pathway, at least during germination., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 6, "predicted_n_glycosites": 6, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 6, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 6, "binding_glycan_count": 0, "secondary_ac_list": "Q9SHX7", "ec_number_list": [ { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.3.2.27", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.2.27", "type": "external" }, { "id": "2.7.10.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.-", "type": "external" }, { "id": "3.1.4.46", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.4.46", "type": "external" }, { "id": "2.7.11.25", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.25", "type": "external" }, { "id": "2.7.11.22", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.22", "type": "external" }, { "id": "2.7.10.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.1", "type": "external" }, { "id": "2.7.11.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.-", "type": "external" }, { "id": "2.7.11.24", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.24", "type": "external" }, { "id": "2.7.12.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.1", "type": "external" }, { "id": "2.7.11.23", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.23", "type": "external" }, { "id": "2.7.12.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.2", "type": "external" }, { "id": "2.7.-.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.-.-", "type": "external" }, { "id": "3.1.26.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.26.-", "type": "external" }, { "id": "3.1.3.16", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.16", "type": "external" }, { "id": "2.7.11.34", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.34", "type": "external" }, { "id": "4.6.1.2", "url": "https://www.rhea-db.org/rhea/?query=ec:4.6.1.2", "type": "external" } ], "go_molecular_function": "GO:0004672 protein kinase activity;GO:0004674 protein serine/threonine kinase activity;GO:0005524 ATP binding;GO:0031625 ubiquitin protein ligase binding;GO:0030246 carbohydrate binding", "go_cellular_component": "GO:0005576 extracellular region;GO:0005634 nucleus;GO:0005886 plasma membrane;GO:0016020 membrane;GO:0009507 chloroplast", "go_biological_process": "GO:0006468 protein phosphorylation;GO:0006955 immune response;GO:0007165 signal transduction;GO:0046777 protein autophosphorylation;GO:0009738 abscisic acid-activated signaling pathway", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q39086-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000010001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q37145-1", "uniprot_id": [ { "id": "ACA1_ARATH", "url": "https://www.uniprot.org/uniprot/Q37145", "type": "external" } ], "mass": 111261.0, "length": 1020, "protein_name": "Calcium-transporting ATPase 1", "gene_name": "ACA1", "organism": "Arabidopsis", "refseq_name": "autoinhibited Ca2+-ATPase 1", "refseq_ac": [ { "id": "NP_001321522", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001321522", "type": "external" } ], "gene_names_uniprotkb": "ACA1; CA2+-ATPASE; F28L5.1; PEA1; PLASTID ENVELOPE ATPASE 1; T22C5.23; T22C5_23; autoinhibited Ca2+-ATPase 1", "gene_names_refseq": "ACA1; CA2+-ATPASE; PEA1; PLASTID ENVELOPE ATPASE 1; T22C5.23; T22C5_23; autoinhibited Ca2+-ATPase 1", "protein_names_uniprotkb": "Calcium-transporting ATPase 1; 7.2.2.10; Ca(2+)-ATPase isoform 1; Plastid envelope ATPase 1", "protein_names_refseq": "autoinhibited Ca2+-ATPase 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G27770)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "11130712;23111157;25561503;27862469;28011693;30833711;8234257", "class_list": "", "function": "Catalyzes the hydrolysis of ATP coupled with the transport of calcium., [UniProtKB, UniProtKB, UniProtKB]; This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol out of the cell or into organelles., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q37146;Q42571;Q42587;Q9SFY1", "ec_number_list": [ { "id": "7.2.2.10", "url": "https://www.rhea-db.org/rhea/?query=ec:7.2.2.10", "type": "external" } ], "go_molecular_function": "GO:0005262 calcium channel activity;GO:0005516 calmodulin binding;GO:0005524 ATP binding;GO:0046872 metal ion binding;GO:0016887 ATP hydrolysis activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005783 endoplasmic reticulum;GO:0005886 plasma membrane;GO:0009507 chloroplast;GO:0009706 chloroplast inner membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q37145-1", "record_type": "protein", "filter_code": "0000000.0000101.010000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1JPL7-1", "uniprot_id": [ { "id": "PME18_ARATH", "url": "https://www.uniprot.org/uniprot/Q1JPL7", "type": "external" } ], "mass": 61687.0, "length": 557, "protein_name": "Pectinesterase/pectinesterase inhibitor 18", "gene_name": "PME18; PMEPCRA", "organism": "Arabidopsis", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "PME18; PMEPCRA; ARATH4; ATPMEPCRA; T23J18.23; T23J18.24; T23J18.33; T23J18_24; methylesterase PCR A", "gene_names_refseq": "", "protein_names_uniprotkb": "Pectinesterase/pectinesterase inhibitor 18; AtPME4; AtPMEpcrA; Pectin methylesterase 18; Pectin methylesterase 4; Pectin methylesterase inhibitor 18; Ribosome-inactivating protein", "protein_names_refseq": "", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G11580)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "11130712;14593172;15337457;16622707;18222123;23820729;27862469;9767082", "class_list": "", "function": "Acts in the modification of cell walls via demethylesterification of cell wall pectin., [UniProtKB, UniProtKB]; Acts in the modification of cell walls via demethylesterification of cell wall pectin. Inhibits the elongation phase of protein synthesis., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O49007;Q94AF4;Q94C39;Q9LPX8;Q9LPX9", "ec_number_list": [ { "id": "3.1.1.11", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.1.11", "type": "external" }, { "id": "3.2.2.22", "url": "https://www.rhea-db.org/rhea/?query=ec:3.2.2.22", "type": "external" } ], "go_molecular_function": "GO:0090729 toxin activity;GO:0030599 pectinesterase activity;GO:0046910 pectinesterase inhibitor activity;GO:0030598 rRNA N-glycosylase activity;GO:0004857 enzyme inhibitor activity", "go_cellular_component": "GO:0005576 extracellular region;GO:0016020 membrane;GO:0000325 plant-type vacuole;GO:0009505 plant-type cell wall", "go_biological_process": "GO:0009617 response to bacterium;GO:0017148 negative regulation of translation;GO:0031640 killing of cells of another organism;GO:0050832 defense response to fungus;GO:0045490 pectin catabolic process", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "Q1JPL7-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1ECJ7-1", "uniprot_id": [ { "id": "ARPC3_ARATH", "url": "https://www.uniprot.org/uniprot/Q1ECJ7", "type": "external" } ], "mass": 19491.0, "length": 174, "protein_name": "Actin-related protein 2/3 complex subunit 3", "gene_name": "ARPC3", "organism": "Arabidopsis", "refseq_name": "actin-related protein C3", "refseq_ac": [ { "id": "NP_001077743", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001077743", "type": "external" } ], "gene_names_uniprotkb": "ARPC3; T13D8.30; T13D8_30; actin-related protein C3", "gene_names_refseq": "ARPC3; T13D8.30; T13D8_30; actin-related protein C3", "protein_names_uniprotkb": "Actin-related protein 2/3 complex subunit 3; Actin-related protein C3; Arp2/3 complex 21 kDa subunit; p21-ARC", "protein_names_refseq": "actin-related protein C3", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G60430)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "11130712;12913159;15653407;15659634;27862469", "class_list": "", "function": "Functions as a component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks. Arp2/3 complex plays a critical role in the control of cell morphogenesis via the modulation of cell polarity development., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O80764;Q8LFW2", "ec_number_list": [], "go_molecular_function": "GO:0003779 actin binding", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005885 Arp2/3 protein complex;GO:0042995 cell projection", "go_biological_process": "GO:0007015 actin filament organization;GO:0034314 Arp2/3 complex-mediated actin nucleation;GO:0030833 regulation of actin filament polymerization", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q1ECJ7-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "P93047-1", "uniprot_id": [ { "id": "HMGB3_ARATH", "url": "https://www.uniprot.org/uniprot/P93047", "type": "external" } ], "mass": 15681.0, "length": 141, "protein_name": "High mobility group B protein 3", "gene_name": "HMGB3", "organism": "Arabidopsis", "refseq_name": "high mobility group B3", "refseq_ac": [ { "id": "NP_001031075", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001031075", "type": "external" } ], "gene_names_uniprotkb": "HMGB3; F2D10; HMG1; HMGB2; HMGBETA2; NFD03; NFD3; high mobility group B3", "gene_names_refseq": "HMGB3; NFD03; NFD3; NUCLEOSOME/CHROMATIN ASSEMBLY FACTOR; high mobility group B3", "protein_names_uniprotkb": "High mobility group B protein 3; AtHMGbeta2; HMG beta 2; High mobility group protein B 2; Nucleosome/chromatin assembly factor group D 03; Nucleosome/chromatin assembly factor group D 3", "protein_names_refseq": "high mobility group B3", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G20696)", "pathway_count": 1, "publication_count": 16, "publication_id_list": "11130712;12653554;14593172;17169924;17316617;19245862;20123078;20466843;23660473;23776212;24043427;25561503;27862469;29167316;30833711;9461286", "class_list": "", "function": "Binds preferentially double-stranded DNA., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 5, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A8MQS4;Q2L6T4", "ec_number_list": [], "go_molecular_function": "GO:0003677 DNA binding;GO:0003682 chromatin binding;GO:0003700 DNA-binding transcription factor activity;GO:0030527 structural constituent of chromatin", "go_cellular_component": "GO:0005634 nucleus;GO:0005829 cytosol;GO:0000785 chromatin;GO:0009507 chloroplast", "go_biological_process": "GO:0006325 chromatin organization", "synthesized_glycan_count": 0, "hit_score": 1.7, "record_id": "P93047-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q15KI9-1", "uniprot_id": [ { "id": "PHYLO_ARATH", "url": "https://www.uniprot.org/uniprot/Q15KI9", "type": "external" } ], "mass": 190182.0, "length": 1715, "protein_name": "Protein PHYLLO, chloroplastic", "gene_name": "PHYLLO", "organism": "Arabidopsis", "refseq_name": "2-oxoglutarate decarboxylase/hydro-lyase/magnesium ion-binding protein", "refseq_ac": [ { "id": "NP_001322314", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001322314", "type": "external" } ], "gene_names_uniprotkb": "PHYLLO; T6L1.7; T6L1.8; T6L1_7", "gene_names_refseq": "PHYLLO; T6L1.7; T6L1_7", "protein_names_uniprotkb": "Protein PHYLLO, chloroplastic; MENC; MEND; MENF; MENH", "protein_names_refseq": "2-oxoglutarate decarboxylase/hydro-lyase/magnesium ion-binding protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G68890)", "pathway_count": 1, "publication_count": 3, "publication_id_list": "11130712;16617180;27862469", "class_list": "", "function": "Multifunctional enzyme required for phylloquinone (vitamin K1) biosynthesis., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q0WV21;Q15KJ0;Q9CAB1;Q9CAB2", "ec_number_list": [ { "id": "2.2.1.9", "url": "https://www.rhea-db.org/rhea/?query=ec:2.2.1.9", "type": "external" }, { "id": "4.2.1.113", "url": "https://www.rhea-db.org/rhea/?query=ec:4.2.1.113", "type": "external" }, { "id": "4.2.99.20", "url": "https://www.rhea-db.org/rhea/?query=ec:4.2.99.20", "type": "external" } ], "go_molecular_function": "GO:0046872 metal ion binding;GO:0030976 thiamine pyrophosphate binding;GO:0070204 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase activity;GO:0043748 O-succinylbenzoate synthase activity;GO:0070205 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase activity", "go_cellular_component": "GO:0009507 chloroplast;GO:0031969 chloroplast membrane", "go_biological_process": "GO:0009063 amino acid catabolic process;GO:0009234 menaquinone biosynthetic process;GO:0042372 phylloquinone biosynthetic process;GO:0042550 photosystem I stabilization", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "Q15KI9-1", "record_type": "protein", "filter_code": "0000000.0000101.010000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q0WQF4-1", "uniprot_id": [ { "id": "VP53A_ARATH", "url": "https://www.uniprot.org/uniprot/Q0WQF4", "type": "external" } ], "mass": 92530.0, "length": 828, "protein_name": "Vacuolar protein sorting-associated protein 53 A", "gene_name": "HIT1; VPS53", "organism": "Arabidopsis", "refseq_name": "Membrane trafficking VPS53 family protein", "refseq_ac": [ { "id": "NP_001185188", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001185188", "type": "external" } ], "gene_names_uniprotkb": "HIT1; VPS53; ATVPS53; F11F12.15; F17J6.4; HEAT-INTOLERANT 1; HIT1; VPS53", "gene_names_refseq": "ARABIDOPSIS THALIANA VPS53 HOMOLOG; ATVPS53; HEAT-INTOLERANT 1; HIT1; VPS53", "protein_names_uniprotkb": "Vacuolar protein sorting-associated protein 53 A; AtVPS53; Protein HEAT-INTOLERANT 1", "protein_names_refseq": "Membrane trafficking VPS53 family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G50500)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "11130712;15235115;16408208;18583349;21398432;21758000;22060019;23572148;27862469", "class_list": "", "function": "Acts as a component of the GARP complex that is involved in retrograde transport from early and late endosomes to the trans-Golgi network (TGN). The GARP complex facilitates tethering as well as SNARE complex assembly at the Golgi (By similarity). Required for vesicle trafficking involved in plasma membrane protein composition. Probably involved in pollen tube elongation and other polar growth. Confers basal tolerance to long-term heat stress and osmotic stress, by acclimation of the plasma membrane., [UniProtKB, PubMed, PubMed, UniProtKB, PubMed, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "F4I6I4;Q9C6Q3;Q9LPS3", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0000938 GARP complex;GO:0000139 Golgi membrane;GO:0005739 mitochondrion;GO:0005794 Golgi apparatus;GO:0005829 cytosol", "go_biological_process": "GO:0006970 response to osmotic stress;GO:0007009 plasma membrane organization;GO:0015031 protein transport;GO:0006890 retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum;GO:0042147 retrograde transport, endosome to Golgi", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "Q0WQF4-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000001001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q24JL3-1", "uniprot_id": [ { "id": "STR2_ARATH", "url": "https://www.uniprot.org/uniprot/Q24JL3", "type": "external" } ], "mass": 37412.0, "length": 342, "protein_name": "Thiosulfate/3-mercaptopyruvate sulfurtransferase 2", "gene_name": "RDH2; STR2", "organism": "Arabidopsis", "refseq_name": "rhodanese homologue 2", "refseq_ac": [ { "id": "NP_001031056", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001031056", "type": "external" } ], "gene_names_uniprotkb": "RDH2; STR2; ATMST2; ATRDH2; F3O9.26; F3O9_26; MST2; RDH2; ST2; STR2; SULFURTRANSFERASE 2; rhodanese homologue 2", "gene_names_refseq": "ARABIDOPSIS THALIANA MERCAPTOPYRUVATE SULFURTRANSFERASE 2; ATMST2; ATRDH2; F3O9.26; F3O9_26; MERCAPTOPYRUVATE SULFURTRANSFERASE 2; MERCAPTOPYRUVATE SULFURTRANSFERASE; MST2; RDH2; ST2; STR2; SULFURTRANSFERASE 2; rhodanese homologue 2", "protein_names_uniprotkb": "Thiosulfate/3-mercaptopyruvate sulfurtransferase 2; 2.8.1.1; 2.8.1.2; AtRDH2; AtStr2; Rhodanese homolog protein 2; Sulfurtransferase 2", "protein_names_refseq": "rhodanese homologue 2", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G16460)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "10734224;10951216;10951223;11130712;15181206;17408957;21189252;27862469", "class_list": "", "function": "Catalyzes the transfer of a sulfur ion from a donor to cyanide or to other thiol compounds. Substrate preference is 3-mercaptopyruvate > thiosulfate. Involved in embryo and seed development., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q0WQ03;Q9M4F7;Q9S7Y9;Q9SA45", "ec_number_list": [ { "id": "2.8.1.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.8.1.1", "type": "external" }, { "id": "2.8.1.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.8.1.2", "type": "external" } ], "go_molecular_function": "GO:0016784 3-mercaptopyruvate sulfurtransferase activity;GO:0004792 thiosulfate-cyanide sulfurtransferase activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005739 mitochondrion;GO:0005829 cytosol;GO:0009507 chloroplast", "go_biological_process": "GO:0002143 tRNA wobble position uridine thiolation;GO:0009793 embryo development ending in seed dormancy", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "Q24JL3-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1PFW3-1", "uniprot_id": [ { "id": "CCSDS_ARATH", "url": "https://www.uniprot.org/uniprot/Q1PFW3", "type": "external" } ], "mass": 65201.0, "length": 578, "protein_name": "Cyclin-SDS", "gene_name": "SDS", "organism": "Arabidopsis", "refseq_name": "Cyclin family protein", "refseq_ac": [ { "id": "NP_001077539", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001077539", "type": "external" } ], "gene_names_uniprotkb": "SDS; F10B6.15; F10B6_15; SOLO DANCERS", "gene_names_refseq": "F10B6.15; F10B6_15; SDS; SOLO DANCERS", "protein_names_uniprotkb": "Cyclin-SDS; Protein SOLO DANCERS", "protein_names_refseq": "Cyclin family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G14750)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "11130712;12065421;15208425;17147637;27862469", "class_list": "", "function": "Meiosis-specific cyclin. Required for normal homolog synapsis and recombination in early to mid-prophase 1. May regulate the timing of sister chromatid separation., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q8RYC7;Q9LQV6", "ec_number_list": [], "go_molecular_function": "GO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0000307 cyclin-dependent protein kinase holoenzyme complex", "go_biological_process": "GO:0051301 cell division;GO:0000082 G1/S transition of mitotic cell cycle;GO:0000724 double-strand break repair via homologous recombination;GO:0051026 chiasma assembly;GO:0007129 homologous chromosome pairing at meiosis", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q1PFW3-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "P60838-1", "uniprot_id": [ { "id": "SUMM2_ARATH", "url": "https://www.uniprot.org/uniprot/P60838", "type": "external" } ], "mass": 102641.0, "length": 894, "protein_name": "Disease resistance protein SUMM2", "gene_name": "SUMM2", "organism": "Arabidopsis", "refseq_name": "LRR and NB-ARC domains-containing disease resistance protein", "refseq_ac": [ { "id": "NP_172692", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_172692", "type": "external" } ], "gene_names_uniprotkb": "SUMM2; F5O11.34; F5O11.3; F5O11_34; F5O11_3; suppressor of mkk1 mkk2 2", "gene_names_refseq": "F5O11.34; F5O11_34; SUMM2; suppressor of mkk1 mkk2 2", "protein_names_uniprotkb": "Disease resistance protein SUMM2; Disease resistance protein At1g12280; Protein SUPPRESSOR OF MKK1 MKK2 2", "protein_names_refseq": "LRR and NB-ARC domains-containing disease resistance protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G12280)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "11130712;22423965;22643122;23820729;25561503;25603932;27862469", "class_list": "", "function": "Disease resistance protein that mediates defense responses against the bacterial pathogen Pseudomonas syringae pv tomato strain DC3000, and the virulent oomycete Hyaloperonospora arabidopsidis isolate Noco2. Becomes active when the MEKK1-MKK1-MKK2-MPK4 kinase cascade is disrupted by the microbial effector hopAI1. Does not seem to be required for the activation of MPK4 by flg22, or flg22-induced up-regulation of PAD3 (PubMed:22423965). Functions downstream of MEKK2/SUMM1 in immune responses, including cell death and defense responses (PubMed:22643122)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 3, "reported_mutagensis": 7, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9LNB5", "ec_number_list": [], "go_molecular_function": "GO:0005524 ATP binding;GO:0043531 ADP binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0098542 defense response to other organism;GO:0006952 defense response;GO:2000377 regulation of reactive oxygen species metabolic process", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "P60838-1", "record_type": "protein", "filter_code": "0000000.0100101.010000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1KPV0-1", "uniprot_id": [ { "id": "FZL_ARATH", "url": "https://www.uniprot.org/uniprot/Q1KPV0", "type": "external" } ], "mass": 100731.0, "length": 912, "protein_name": "Probable transmembrane GTPase FZO-like, chloroplastic", "gene_name": "FZL", "organism": "Arabidopsis", "refseq_name": "FZO-like protein", "refseq_ac": [ { "id": "NP_001077452", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001077452", "type": "external" } ], "gene_names_uniprotkb": "FZL; F10O3.1; F10O3_1; F15K9.23; FZO-like", "gene_names_refseq": "F10O3.1; F10O3_1; FZL; FZO-like", "protein_names_uniprotkb": "Probable transmembrane GTPase FZO-like, chloroplastic; 3.6.5.-", "protein_names_refseq": "FZO-like protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G03160)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "11130712;14593172;16617119;22074104;23963675;27862469", "class_list": "", "function": "Probable membrane-remodeling GTPase that plays a unique role in the in the determination of thylakoid and chloroplast morphology and regulates organization of the thylakoid network. Not involved in the determination of mitochondrial morphology or ultrastructure., [UniProtKB, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "Q67Z21;Q6NQ84;Q9SA53;Q9ZVR8", "ec_number_list": [], "go_molecular_function": "GO:0005525 GTP binding;GO:0016787 hydrolase activity", "go_cellular_component": "GO:0009535 chloroplast thylakoid membrane;GO:0009507 chloroplast;GO:0009706 chloroplast inner membrane;GO:0009707 chloroplast outer membrane;GO:0031969 chloroplast membrane", "go_biological_process": "GO:1900425 negative regulation of defense response to bacterium;GO:0010027 thylakoid membrane organization;GO:0010228 vegetative to reproductive phase transition of meristem;GO:0034051 negative regulation of plant-type hypersensitive response", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q1KPV0-1", "record_type": "protein", "filter_code": "0000000.0100101.010000.100000000000000000.0000000001001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "P82873-1", "uniprot_id": [ { "id": "TO202_ARATH", "url": "https://www.uniprot.org/uniprot/P82873", "type": "external" } ], "mass": 23170.0, "length": 210, "protein_name": "Mitochondrial import receptor subunit TOM20-2", "gene_name": "TOM20-2", "organism": "Arabidopsis", "refseq_name": "translocase outer membrane 20-2", "refseq_ac": [ { "id": "NP_174059", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_174059", "type": "external" } ], "gene_names_uniprotkb": "TOM20-2; F17L21.18; F17L21_18", "gene_names_refseq": "F17L21.18; F17L21_18; TOM20-2; translocase outer membrane 20-2", "protein_names_uniprotkb": "Mitochondrial import receptor subunit TOM20-2; Translocase of outer membrane 20 kDa subunit 2", "protein_names_refseq": "translocase outer membrane 20-2", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G27390)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "11130712;11161051;14671022;14730085;17981999;22223895;27862469;31118221", "class_list": "", "function": "Central component of the receptor complex responsible for the recognition and translocation of cytosolically synthesized mitochondrial preproteins. Together with TOM22 functions as the transit peptide receptor at the surface of the mitochondrion outer membrane and facilitates the movement of preproteins into the translocation pore., [UniProtKB, PubMed, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q2HIH9;Q9FZJ6", "ec_number_list": [], "go_molecular_function": "GO:0046872 metal ion binding;GO:0015450 protein-transporting ATPase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005739 mitochondrion;GO:0005741 mitochondrial outer membrane;GO:0005743 mitochondrial inner membrane;GO:0005744 TIM23 mitochondrial import inner membrane translocase complex", "go_biological_process": "GO:0045040 protein insertion into mitochondrial outer membrane;GO:0006626 protein targeting to mitochondrion;GO:0015031 protein transport", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "P82873-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "P92949-1", "uniprot_id": [ { "id": "FRO2_ARATH", "url": "https://www.uniprot.org/uniprot/P92949", "type": "external" } ], "mass": 81501.0, "length": 725, "protein_name": "Ferric reduction oxidase 2", "gene_name": "FRO2", "organism": "Arabidopsis", "refseq_name": "ferric reduction oxidase 2", "refseq_ac": [ { "id": "NP_171664", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_171664", "type": "external" } ], "gene_names_uniprotkb": "FRO2; ATFRO2; F22L4.12; F22L4_12; FERRIC REDUCTION OXIDASE 2; FRD1; ferric reduction oxidase 2", "gene_names_refseq": "ATFRO2; F22L4.12; F22L4_12; FERRIC CHELATE REDUCTASE DEFECTIVE 1; FERRIC REDUCTION OXIDASE 2; FRD1; FRO2; ferric reduction oxidase 2", "protein_names_uniprotkb": "Ferric reduction oxidase 2; 1.16.1.7; AtFRO2; Ferric-chelate reductase 2; Protein FERRIC CHELATE REDUCTASE DEFECTIVE 1", "protein_names_refseq": "ferric reduction oxidase 2", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G01580)", "pathway_count": 1, "publication_count": 13, "publication_id_list": "10067892;11130712;12805609;14526117;16006655;16362328;16813577;16845482;18397377;18513375;20055961;23328941;27862469", "class_list": "", "function": "Flavocytochrome that transfers electrons across the plasma membrane to reduce ferric iron chelates to form soluble ferrous iron in the rhizosphere. May be involved in the delivery of iron to developing pollen grains. Also acts as a copper-chelate reductase. Involved in glycine betaine-mediated chilling tolerance and reactive oxygen species accumulation., [UniProtKB, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 7, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "Q9LMM3", "ec_number_list": [ { "id": "1.16.1.7", "url": "https://www.rhea-db.org/rhea/?query=ec:1.16.1.7", "type": "external" } ], "go_molecular_function": "GO:0046872 metal ion binding;GO:0000293 ferric-chelate reductase activity;GO:0140618 ferric-chelate reductase (NADH) activity;GO:0016491 oxidoreductase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005886 plasma membrane;GO:0016020 membrane", "go_biological_process": "GO:0009617 response to bacterium;GO:0033214 siderophore-iron import into cell;GO:0060586 multicellular organismal-level iron ion homeostasis;GO:0033212 iron import into cell", "synthesized_glycan_count": 0, "hit_score": 1.4, "record_id": "P92949-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000001001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A1P8AVS2-1", "uniprot_id": [ { "id": "A0A1P8AVS2_ARATH", "url": "https://www.uniprot.org/uniprot/A0A1P8AVS2", "type": "external" } ], "mass": 45592.0, "length": 409, "protein_name": "Translation initiation factor eIF2B subunit alpha", "gene_name": "T10D10.19; T10D10_19", "organism": "Arabidopsis", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "T10D10.19; T10D10_19", "gene_names_refseq": "", "protein_names_uniprotkb": "Translation initiation factor eIF2B subunit alpha; eIF2B GDP-GTP exchange factor subunit alpha", "protein_names_refseq": "", "tax_id": 3702, "disease": "", "pathway": "", "pathway_count": 0, "publication_count": 3, "publication_id_list": "11130712;19376835;27862469", "class_list": "", "function": "", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0003743 translation initiation factor activity", "go_cellular_component": "GO:0005829 cytosol;GO:0005634 nucleus;GO:0005851 eukaryotic translation initiation factor 2B complex;GO:0009507 chloroplast", "go_biological_process": "GO:0006413 translational initiation", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "A0A1P8AVS2-1", "record_type": "protein", "filter_code": "0000000.0000100.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q0WVE8-1", "uniprot_id": [ { "id": "RP6L1_ARATH", "url": "https://www.uniprot.org/uniprot/Q0WVE8", "type": "external" } ], "mass": 73483.0, "length": 637, "protein_name": "Protein RRP6-like 1", "gene_name": "RRP6L1", "organism": "Arabidopsis", "refseq_name": "Polynucleotidyl transferase, ribonuclease H fold protein with HRDC domain-containing protein", "refseq_ac": [ { "id": "NP_175846", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_175846", "type": "external" } ], "gene_names_uniprotkb": "RRP6L1; F20D21.26; F20D21_26", "gene_names_refseq": "F20D21.26; F20D21_26", "protein_names_uniprotkb": "Protein RRP6-like 1; AtRRP6L1", "protein_names_refseq": "Polynucleotidyl transferase, ribonuclease H fold protein with HRDC domain-containing protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G54440)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "11130712;18285452;23555312;24719467;24726328;25211139;25561503;27862469", "class_list": "", "function": "Acts as an important epigenetic regulator through multiple silencing mechanisms (PubMed:23555312, PubMed:24719467, PubMed:24726328, PubMed:25211139). Involved in transcriptional gene silencing (TGS). Plays a role for DNA methylation in the RNA-directed DNA methylation (RdDM) pathway. Contributes to the methylation status of the retrotransposon SN1. Required for DNA methylation only at a subset of RdDM target loci (PubMed:24719467). Plays a regulatory role in RdDM through retention of non-coding RNAs (ncRNAs) in normal cells. Helps to retain Pol V-transcribed RNAs in chromatin to enable their scaffold function and is required for genome-wide Pol IV-dependent siRNA (24 nt siRNA) production that may involve retention of Pol IV transcripts (PubMed:24726328). Involved in association with RRP6L2 in the silencing of the solo LTR locus. Controls levels of ncRNAs from the solo LTR locus. Seems to function independently of the RdDM pathway (PubMed:23555312). Functions redundantly with RRP6L2 in the regulation of FLC locus. Participates in the maintenance of trimethylated 'Lys-27' (H3K27me3) at FLC locus via the regulation of antisense long non-coding RNAs (lncRNAs) and the regulation of diverse antisense RNAs derived from the FLC locus (PubMed:25211139). Seems not involved in the exosomal RNA degradation (PubMed:24726328, PubMed:25211139). Can complement the growth defect of a yeast mutant lacking RRP6 exonuclease (PubMed:18285452)., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q0WMR6;Q9SLI9", "ec_number_list": [], "go_molecular_function": "GO:0000166 nucleotide binding;GO:0003727 single-stranded RNA binding;GO:0000175 3'-5'-RNA exonuclease activity;GO:0003676 nucleic acid binding;GO:0016740 transferase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005654 nucleoplasm;GO:0005730 nucleolus;GO:0000176 nuclear exosome (RNase complex)", "go_biological_process": "GO:0071044 histone mRNA catabolic process;GO:0006346 DNA methylation-dependent constitutive heterochromatin formation;GO:0000467 exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA);GO:0071035 nuclear polyadenylation-dependent rRNA catabolic process;GO:0071038 TRAMP-dependent tRNA surveillance pathway", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "Q0WVE8-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "C0SUU6-1", "uniprot_id": [ { "id": "STKLA_ARATH", "url": "https://www.uniprot.org/uniprot/C0SUU6", "type": "external" } ], "mass": 39231.0, "length": 352, "protein_name": "Probable transcription factor At1g11510", "gene_name": "T23J18.17; T23J18_17", "organism": "Arabidopsis", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "T23J18.17; T23J18_17", "gene_names_refseq": "", "protein_names_uniprotkb": "Probable transcription factor At1g11510; Storekeeper-like protein At1g11510", "protein_names_refseq": "", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G11510)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "11130712;12535344;26187819;27031427;27862469", "class_list": "", "function": "", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 4, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9LPY4", "ec_number_list": [], "go_molecular_function": "GO:0003677 DNA binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006355 regulation of DNA-templated transcription", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "C0SUU6-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q0WL80-1", "uniprot_id": [ { "id": "UGGG_ARATH", "url": "https://www.uniprot.org/uniprot/Q0WL80", "type": "external" } ], "mass": 181805.0, "length": 1613, "protein_name": "UDP-glucose:glycoprotein glucosyltransferase", "gene_name": "EBS1; UGGT", "organism": "Arabidopsis", "refseq_name": "EMS-MUTAGENIZED BRI1 SUPPRESSOR 1", "refseq_ac": [ { "id": "NP_001185370", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001185370", "type": "external" } ], "gene_names_uniprotkb": "EBS1; UGGT; EBS1; F23N20; F3I17.13; F3I17_13; PRIORITY IN SWEET LIFE 2; PSL2; UGGT", "gene_names_refseq": "EBS1; EMS-mutagenized bri1 suppressor 1; F3I17.13; F3I17_13; PRIORITY IN SWEET LIFE 2; PSL2; UDP-GLUCOSE:GLYCOPROTEIN GLUCOSYLTRANSFERASE; UGGT", "protein_names_uniprotkb": "UDP-glucose:glycoprotein glucosyltransferase; 2.4.1.-; EMS-mutagenized BRI1 suppressor 1; Protein PRIORITY IN SWEET LIFE 2", "protein_names_refseq": "EMS-MUTAGENIZED BRI1 SUPPRESSOR 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G71220)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "11130712;17588517;19717464;19763087;23172892;27862469", "class_list": "", "function": "Recognizes glycoproteins with minor folding defects. Reglucosylates single N-glycans near the misfolded part of the protein, thus providing quality control for protein folding in the endoplasmic reticulum. Reglucosylated proteins are recognized by calreticulin for recycling to the endoplasmic reticulum and refolding or degradation. Required for elongation factor Tu receptor (EFR), but not flagellin-sensing 2 (FLS2) signaling., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 4, "predicted_n_glycosites": 4, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 4, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 4, "binding_glycan_count": 0, "secondary_ac_list": "F4I8G1", "ec_number_list": [], "go_molecular_function": "GO:0051082 unfolded protein binding;GO:0003980 UDP-glucose:glycoprotein glucosyltransferase activity", "go_cellular_component": "GO:0005739 mitochondrion;GO:0005783 endoplasmic reticulum;GO:0005788 endoplasmic reticulum lumen;GO:0009507 chloroplast", "go_biological_process": "GO:0009101 glycoprotein biosynthetic process;GO:0009751 response to salicylic acid;GO:0009626 plant-type hypersensitive response;GO:0046283 anthocyanin-containing compound metabolic process", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q0WL80-1", "record_type": "protein", "filter_code": "0000000.0100101.010000.100000000000000000.0000000010001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q0WX00-1", "uniprot_id": [ { "id": "RNG1B_ARATH", "url": "https://www.uniprot.org/uniprot/Q0WX00", "type": "external" } ], "mass": 51975.0, "length": 460, "protein_name": "Putative E3 ubiquitin-protein ligase RING1b", "gene_name": "RING1B", "organism": "Arabidopsis", "refseq_name": "RING 1B", "refseq_ac": [ { "id": "NP_171873", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_171873", "type": "external" } ], "gene_names_uniprotkb": "RING1B; ARABIDOPSIS THALIANA RING 1B; ATRING1B; F21M11.30; F21M11.32; F21M11_32; RF5; RING 1B", "gene_names_refseq": "ARABIDOPSIS THALIANA RING 1B; ATRING1B; F21M11.32; F21M11_32; RING 1B; RING1B", "protein_names_uniprotkb": "Putative E3 ubiquitin-protein ligase RING1b; 2.3.2.27; AtRING1b; Polycomb complex protein RING1b; Protein RING1b; RING-type E3 ubiquitin transferase RING1b; Ring finger protein 5", "protein_names_refseq": "RING 1B", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G03770)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "11130712;11983057;19097900;20466843;27862469;30833711", "class_list": "", "function": "As part of the PRC1-like complex, repress class I KNOX gene expression. PcG PRC1 complex maintains the transcriptionally repressive state of many genes, including Hox genes, throughout development. PcG PRC1 complex acts via chromatin remodeling and modification of histones, rendering chromatin heritably changed in its expressibility., [UniProtKB, PubMed]; Putative E3 ubiquitin-protein ligase that mediates monoubiquitination of 'Lys-119' of histone H2A (H2AK119ub), thereby playing a central role in histone code and gene regulation., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 5, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9ZW99", "ec_number_list": [], "go_molecular_function": "GO:0008270 zinc ion binding;GO:0061630 ubiquitin protein ligase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0035102 PRC1 complex", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0045892 negative regulation of DNA-templated transcription;GO:0016567 protein ubiquitination;GO:0045814 negative regulation of gene expression, epigenetic;GO:0001709 cell fate determination", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q0WX00-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q3E7D0-1", "uniprot_id": [ { "id": "NAT12_ARATH", "url": "https://www.uniprot.org/uniprot/Q3E7D0", "type": "external" } ], "mass": 76674.0, "length": 709, "protein_name": "Nucleobase-ascorbate transporter 12", "gene_name": "NAT12", "organism": "Arabidopsis", "refseq_name": "nucleobase-ascorbate transporter 12", "refseq_ac": [ { "id": "NP_850108", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_850108", "type": "external" } ], "gene_names_uniprotkb": "NAT12; ATNAT12; F15K20.9; F15K20_9", "gene_names_refseq": "ARABIDOPSIS NUCLEOBASE-ASCORBATE TRANSPORTER 12; ATNAT12; F15K20.9; F15K20_9; NAT12; nucleobase-ascorbate transporter 12", "protein_names_uniprotkb": "Nucleobase-ascorbate transporter 12; AtNAT12", "protein_names_refseq": "nucleobase-ascorbate transporter 12", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G27810)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "10617197;14506206;14593172;15308754;16982705;17317660;19376835;27862469;28011693", "class_list": "", "function": "", "predicted_glycosites": 2, "predicted_n_glycosites": 0, "predicted_o_glycosites": 2, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 8, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 2, "binding_glycan_count": 0, "secondary_ac_list": "Q8LPL9;Q9ZUY2", "ec_number_list": [], "go_molecular_function": "GO:0015207 adenine transmembrane transporter activity;GO:0015208 guanine transmembrane transporter activity;GO:0015210 uracil transmembrane transporter activity;GO:0015294 solute:monoatomic cation symporter activity;GO:0022857 transmembrane transporter activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005886 plasma membrane;GO:0009507 chloroplast;GO:0016020 membrane", "go_biological_process": "GO:0035344 hypoxanthine transport;GO:0098702 adenine import across plasma membrane;GO:0098710 guanine import across plasma membrane;GO:0098721 uracil import across plasma membrane", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "Q3E7D0-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000001001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q07100-1", "uniprot_id": [ { "id": "PP2A3_ARATH", "url": "https://www.uniprot.org/uniprot/Q07100", "type": "external" } ], "mass": 35833.0, "length": 313, "protein_name": "Serine/threonine-protein phosphatase PP2A-3 catalytic subunit", "gene_name": "PP2A-3; PP2A3", "organism": "Arabidopsis", "refseq_name": "protein phosphatase 2A-3", "refseq_ac": [ { "id": "NP_565974", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_565974", "type": "external" } ], "gene_names_uniprotkb": "PP2A-3; PP2A3; MHK10.22; PP2A-4; PP2A4; protein phosphatase 2A-3; protein phosphatase 2A-4", "gene_names_refseq": "MHK10.22; PP2A-3; PP2A-4; protein phosphatase 2A-3; protein phosphatase 2A-4", "protein_names_uniprotkb": "Serine/threonine-protein phosphatase PP2A-3 catalytic subunit; 3.1.3.16; Protein phosphatase 2A isoform 3", "protein_names_refseq": "protein phosphatase 2A-3", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G42500)", "pathway_count": 1, "publication_count": 13, "publication_id_list": "10617197;14593172;17368080;21216945;23167545;24357600;26792519;26888284;27862469;28741704;7948902;8382968;9524239", "class_list": "", "function": "Functions redundantly with PP2A4, and is involved in establishing auxin gradients, apical-basal axis of polarity and root and shoot apical meristem during embryogenesis. May dephosphorylate PIN1 and regulate its subcellular distribution for polar auxin transport (PubMed:23167545). Involved in the regulation of formative cell division in roots by dephosphorylating ACR4 protein kinase (PubMed:26792519)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q7G9R3;Q9ZRF6", "ec_number_list": [ { "id": "3.1.3.16", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.16", "type": "external" }, { "id": "3.1.3.27", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.27", "type": "external" }, { "id": "3.1.3.48", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.48", "type": "external" }, { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.7.13.3", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.13.3", "type": "external" } ], "go_molecular_function": "GO:0046872 metal ion binding;GO:0004722 protein serine/threonine phosphatase activity;GO:0004721 phosphoprotein phosphatase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005829 cytosol", "go_biological_process": "GO:0000278 mitotic cell cycle;GO:0048863 stem cell differentiation;GO:0048364 root development;GO:0080022 primary root development", "synthesized_glycan_count": 0, "hit_score": 1.4, "record_id": "Q07100-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "O80719-1", "uniprot_id": [ { "id": "CARK3_ARATH", "url": "https://www.uniprot.org/uniprot/O80719", "type": "external" } ], "mass": 39931.0, "length": 365, "protein_name": "Protein CYTOSOLIC ABA RECEPTOR KINASE 3", "gene_name": "CARK3; PTI1-4", "organism": "Arabidopsis", "refseq_name": "Protein kinase superfamily protein", "refseq_ac": [ { "id": "NP_001031552", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001031552", "type": "external" } ], "gene_names_uniprotkb": "CARK3; PTI1-4; F14M4.11; PTI1-4; Pto-interacting 1-4", "gene_names_refseq": "F14M4.11; PTI1-4; Pto-interacting 1-4", "protein_names_uniprotkb": "Protein CYTOSOLIC ABA RECEPTOR KINASE 3; 2.7.11.1; PTI1-4; PTI1-like tyrosine-protein kinase 4; Pto-interacting protein 1-4", "protein_names_refseq": "Protein kinase superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G47060)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "10617197;14593172;21276203;27862469;35388459;39673241", "class_list": "", "function": "Receptor-like cytoplasmic kinase (RLCK) that triggers abscisic acid (ABA) signaling in response to dehydration by phosphorylating and activating ABA receptors to support their monomerization and enhance their ABA binding affinity; they in turn repress PP2C protein phosphatases acting as negative regulators of ABA responses (Probable). May be involved in reactive oxygen stress signaling mediated by the kinase OXI1, and leading to specific genes expression; supports OXI1 kinase activity (PubMed:21276203, PubMed:39673241)., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 13, "reported_mutagensis": 2, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q27GL0;Q2V401;Q3EBE8", "ec_number_list": [ { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.3.2.27", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.2.27", "type": "external" }, { "id": "2.7.10.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.-", "type": "external" }, { "id": "3.1.4.46", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.4.46", "type": "external" }, { "id": "2.7.11.25", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.25", "type": "external" }, { "id": "2.7.11.22", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.22", "type": "external" }, { "id": "2.7.10.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.1", "type": "external" }, { "id": "2.7.11.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.-", "type": "external" }, { "id": "2.7.11.24", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.24", "type": "external" }, { "id": "2.7.12.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.1", "type": "external" }, { "id": "2.7.11.23", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.23", "type": "external" }, { "id": "2.7.12.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.2", "type": "external" }, { "id": "2.7.-.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.-.-", "type": "external" }, { "id": "3.1.26.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.26.-", "type": "external" }, { "id": "3.1.3.16", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.16", "type": "external" }, { "id": "2.7.11.34", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.34", "type": "external" }, { "id": "4.6.1.2", "url": "https://www.rhea-db.org/rhea/?query=ec:4.6.1.2", "type": "external" } ], "go_molecular_function": "GO:0004674 protein serine/threonine kinase activity;GO:0005524 ATP binding;GO:0042802 identical protein binding;GO:0042803 protein homodimerization activity;GO:0046872 metal ion binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005829 cytosol", "go_biological_process": "GO:0006979 response to oxidative stress;GO:0035556 intracellular signal transduction;GO:0042542 response to hydrogen peroxide;GO:0009611 response to wounding;GO:0009737 response to abscisic acid", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "O80719-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "P93740-1", "uniprot_id": [ { "id": "NUD23_ARATH", "url": "https://www.uniprot.org/uniprot/P93740", "type": "external" } ], "mass": 30794.0, "length": 280, "protein_name": "Nudix hydrolase 23, chloroplastic", "gene_name": "NUDT23; NUDX23", "organism": "Arabidopsis", "refseq_name": "nudix hydrolase homolog 23", "refseq_ac": [ { "id": "NP_565965", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_565965", "type": "external" } ], "gene_names_uniprotkb": "NUDT23; NUDX23; ATNUDT23; ATNUDX23; NUDX23; T6D20.4; T6D20_4; nudix hydrolase homolog 23", "gene_names_refseq": "ARABIDOPSIS THALIANA NUDIX HYDROLASE HOMOLOG 23; ATNUDT23; ATNUDX23; NUDX23; T6D20.4; T6D20_4; nudix hydrolase homolog 23", "protein_names_uniprotkb": "Nudix hydrolase 23, chloroplastic; 3.6.1.-; 3.6.1.13; 3.6.1.18; ADP-ribose pyrophosphatase; AtNUDT23; FAD diphosphatase", "protein_names_refseq": "nudix hydrolase homolog 23", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G42070)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "10617197;15878881;18815383;27862469", "class_list": "", "function": "Mediates the hydrolysis of some nucleoside diphosphate derivatives. Can use FAD and ADP-ribose as substrates., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q1ECD1;Q8LAH1", "ec_number_list": [ { "id": "3.6.1.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.1.-", "type": "external" }, { "id": "3.6.1.13", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.1.13", "type": "external" }, { "id": "3.6.1.18", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.1.18", "type": "external" }, { "id": "3.6.1.22", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.1.22", "type": "external" }, { "id": "3.6.1.16", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.1.16", "type": "external" }, { "id": "3.6.1.53", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.1.53", "type": "external" }, { "id": "3.6.1.21", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.1.21", "type": "external" } ], "go_molecular_function": "GO:0046872 metal ion binding;GO:0047631 ADP-ribose diphosphatase activity;GO:0047884 FAD diphosphatase activity;GO:0016787 hydrolase activity", "go_cellular_component": "GO:0009507 chloroplast", "go_biological_process": "GO:0009416 response to light stimulus;GO:0042726 flavin-containing compound metabolic process", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "P93740-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q2V419-1", "uniprot_id": [ { "id": "CKB12_ARATH", "url": "https://www.uniprot.org/uniprot/Q2V419", "type": "external" } ], "mass": 35582.0, "length": 311, "protein_name": "Cyclin-dependent kinase B1-2", "gene_name": "CDKB1-2; CDKB1", "organism": "Arabidopsis", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "CDKB1-2; CDKB1; CDKB1:2; CYCLIN-DEPENDENT KINASE B1:2; T6A23.18; T6A23_18; cyclin-dependent kinase B1:2", "gene_names_refseq": "", "protein_names_uniprotkb": "Cyclin-dependent kinase B1-2; 2.7.11.22; 2.7.11.23; 2; CDKB1", "protein_names_refseq": "", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G38620)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "10617197;11432958;11971144;17094738;20675570;24123248;27862469;29167316", "class_list": "", "function": "Together with CDKB1-1, promotes both the last division in the stomatal cell lineage as well as the number of stomata (PubMed:20675570). In collaboration with MYB124 and MYB88, restrict the G1/S transition and chloroplast and nuclear number during stomatal formation, and normally maintain fate and developmental progression throughout the stomatal cell lineage (PubMed:24123248)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 5, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q56XK5;Q9ZVI4", "ec_number_list": [ { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.3.2.27", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.2.27", "type": "external" }, { "id": "2.7.10.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.-", "type": "external" }, { "id": "3.1.4.46", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.4.46", "type": "external" }, { "id": "2.7.11.25", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.25", "type": "external" }, { "id": "2.7.11.22", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.22", "type": "external" }, { "id": "2.7.10.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.1", "type": "external" }, { "id": "2.7.11.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.-", "type": "external" }, { "id": "2.7.11.24", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.24", "type": "external" }, { "id": "2.7.12.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.1", "type": "external" }, { "id": "2.7.11.23", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.23", "type": "external" }, { "id": "2.7.12.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.2", "type": "external" }, { "id": "2.7.-.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.-.-", "type": "external" }, { "id": "3.1.26.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.26.-", "type": "external" }, { "id": "3.1.3.16", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.16", "type": "external" }, { "id": "2.7.11.34", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.34", "type": "external" }, { "id": "4.6.1.2", "url": "https://www.rhea-db.org/rhea/?query=ec:4.6.1.2", "type": "external" } ], "go_molecular_function": "GO:0004674 protein serine/threonine kinase activity;GO:0005524 ATP binding;GO:0004693 cyclin-dependent protein serine/threonine kinase activity;GO:0008353 RNA polymerase II CTD heptapeptide repeat kinase activity;GO:0030332 cyclin binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0000307 cyclin-dependent protein kinase holoenzyme complex", "go_biological_process": "GO:0007165 signal transduction;GO:0000086 G2/M transition of mitotic cell cycle;GO:1902806 regulation of cell cycle G1/S phase transition;GO:0051726 regulation of cell cycle;GO:0032875 regulation of DNA endoreduplication", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "Q2V419-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "O82256-1", "uniprot_id": [ { "id": "COL13_ARATH", "url": "https://www.uniprot.org/uniprot/O82256", "type": "external" } ], "mass": 37510.0, "length": 332, "protein_name": "Zinc finger protein CONSTANS-LIKE 13", "gene_name": "COL13", "organism": "Arabidopsis", "refseq_name": "B-box type zinc finger protein with CCT domain-containing protein", "refseq_ac": [ { "id": "NP_182310", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_182310", "type": "external" } ], "gene_names_uniprotkb": "COL13; F17A22.28; T9J23", "gene_names_refseq": "F17A22.28", "protein_names_uniprotkb": "Zinc finger protein CONSTANS-LIKE 13", "protein_names_refseq": "B-box type zinc finger protein with CCT domain-containing protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G47890)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "10617197;12692345;23328941;27862469", "class_list": "", "function": "", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q7GAB9", "ec_number_list": [], "go_molecular_function": "GO:0003677 DNA binding;GO:0003700 DNA-binding transcription factor activity;GO:0008270 zinc ion binding;GO:0000976 transcription cis-regulatory region binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006355 regulation of DNA-templated transcription;GO:0007623 circadian rhythm;GO:0009416 response to light stimulus;GO:0009637 response to blue light;GO:0010114 response to red light", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "O82256-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q38998-1", "uniprot_id": [ { "id": "AKT1_ARATH", "url": "https://www.uniprot.org/uniprot/Q38998", "type": "external" } ], "mass": 96990.0, "length": 857, "protein_name": "Potassium channel AKT1", "gene_name": "AKT1; KT1", "organism": "Arabidopsis", "refseq_name": "K+ transporter 1", "refseq_ac": [ { "id": "NP_001324538", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001324538", "type": "external" } ], "gene_names_uniprotkb": "AKT1; KT1; AKT1; ATAKT1; F18A8.2; F18A8_2; K+ transporter 1; POTASSIUM TRANSPORTER", "gene_names_refseq": "AKT1; ATAKT1; F18A8.2; F18A8_2; K+ transporter 1; KT1; POTASSIUM TRANSPORTER", "protein_names_uniprotkb": "Potassium channel AKT1", "protein_names_refseq": "K+ transporter 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G26650)", "pathway_count": 1, "publication_count": 18, "publication_id_list": "10617197;11500563;12678562;14593172;1585180;16814720;16895985;17898163;19423640;20413648;23331977;23572148;24699751;27862469;8555458;8820606;9218788;9572739", "class_list": "", "function": "Highly selective inward-rectifying potassium channel that mediate potassium uptake by plant roots in response to low K(+) conditions, by a calcium-, CBL-, and CIPK-dependent pathway. Positively regulated by phosphorylation by CIPK23. Negatively regulated by a kinase-independent regulatory mechanism involving a competing direct binding of CBL10. Involved in the stomatal regulation by monitoring the turgor pressure in guard cells. Assuming opened or closed conformations in response to the voltage difference across the membrane, the channel is activated by hyperpolarization. May interact with the cytoskeleton or with regulatory proteins (PubMed:12678562, PubMed:16814720, PubMed:16895985, PubMed:17898163, PubMed:9572739). Is essential with POT5/HAK5 for high-affinity potassium uptake in roots during seedling establishment and postgermination growth under low potassium conditions (PubMed:20413648)., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed]; Potassium channel., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "B9DI19;Q0WTF6;Q38797;Q84MA7", "ec_number_list": [], "go_molecular_function": "GO:0042802 identical protein binding;GO:0005242 inward rectifier potassium channel activity;GO:0005249 voltage-gated potassium channel activity", "go_cellular_component": "GO:0005886 plasma membrane;GO:0034702 monoatomic ion channel complex", "go_biological_process": "GO:0006813 potassium ion transport;GO:0009651 response to salt stress;GO:0009414 response to water deprivation;GO:1990573 potassium ion import across plasma membrane;GO:0048767 root hair elongation", "synthesized_glycan_count": 0, "hit_score": 1.9, "record_id": "Q38998-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q05762-1", "uniprot_id": [ { "id": "DRTS1_ARATH", "url": "https://www.uniprot.org/uniprot/Q05762", "type": "external" } ], "mass": 58143.0, "length": 519, "protein_name": "Bifunctional dihydrofolate reductase-thymidylate synthase 1", "gene_name": "DHFR-TS-1; THY-1", "organism": "Arabidopsis", "refseq_name": "thymidylate synthase 1", "refseq_ac": [ { "id": "NP_001324593", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001324593", "type": "external" } ], "gene_names_uniprotkb": "DHFR-TS-1; THY-1; F16F14.13; F16F14_13; THY-1; thymidylate synthase 1", "gene_names_refseq": "DIHYDROFOLATE REDUCTASE-THYMIDYLATE SYNTHASE; F16F14.13; F16F14_13; THY-1; thymidylate synthase 1", "protein_names_uniprotkb": "Bifunctional dihydrofolate reductase-thymidylate synthase 1; DHFR-TS 1", "protein_names_refseq": "thymidylate synthase 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G16370)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "10617197;14593172;20466843;22223895;23328941;25561503;27862469;29654922;8374616", "class_list": "", "function": "Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism. Can play two different roles depending on the source of dihydrofolate: de novo synthesis of tetrahydrofolate or recycling of the dihydrofolate released as one of the end products of the TS catalyzed reaction. Catalyzes an essential reaction for de novo glycine and purine synthesis, DNA precursor synthesis, and for the conversion of dUMP to dTMP., [UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 4, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9SIW4", "ec_number_list": [ { "id": "1.5.1.3", "url": "https://www.rhea-db.org/rhea/?query=ec:1.5.1.3", "type": "external" }, { "id": "2.1.1.45", "url": "https://www.rhea-db.org/rhea/?query=ec:2.1.1.45", "type": "external" } ], "go_molecular_function": "GO:0004146 dihydrofolate reductase activity;GO:0004799 thymidylate synthase activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005739 mitochondrion;GO:0005829 cytosol", "go_biological_process": "GO:0006231 dTMP biosynthetic process;GO:0006730 one-carbon metabolic process;GO:0032259 methylation;GO:0009257 10-formyltetrahydrofolate biosynthetic process;GO:0046654 tetrahydrofolate biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "Q05762-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1PF17-1", "uniprot_id": [ { "id": "BH018_ARATH", "url": "https://www.uniprot.org/uniprot/Q1PF17", "type": "external" } ], "mass": 33862.0, "length": 305, "protein_name": "Transcription factor bHLH18", "gene_name": "BHLH18", "organism": "Arabidopsis", "refseq_name": "basic helix-loop-helix (bHLH) DNA-binding superfamily protein", "refseq_ac": [ { "id": "NP_001077944", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001077944", "type": "external" } ], "gene_names_uniprotkb": "BHLH18; EN28; T30L20.1; T30L20_1", "gene_names_refseq": "T30L20.1; T30L20_1", "protein_names_uniprotkb": "Transcription factor bHLH18; AtbHLH18; Basic helix-loop-helix protein 18; Transcription factor EN 28; bHLH 18; bHLH transcription factor bHLH018", "protein_names_refseq": "basic helix-loop-helix (bHLH) DNA-binding superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G22750)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "10617197;12679534;12897250;14600211;17147637;27862469", "class_list": "", "function": "", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0MEP3;O82396;Q8S3F3", "ec_number_list": [], "go_molecular_function": "GO:0003677 DNA binding;GO:0003700 DNA-binding transcription factor activity;GO:0046983 protein dimerization activity", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006355 regulation of DNA-templated transcription", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q1PF17-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "P93733-1", "uniprot_id": [ { "id": "PLDB1_ARATH", "url": "https://www.uniprot.org/uniprot/P93733", "type": "external" } ], "mass": 121101.0, "length": 1083, "protein_name": "Phospholipase D beta 1", "gene_name": "PLDBETA1", "organism": "Arabidopsis", "refseq_name": "phospholipase D beta 1", "refseq_ac": [ { "id": "NP_565963", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_565963", "type": "external" } ], "gene_names_uniprotkb": "PLDBETA1; PHOSPHOLIPASE D; PLDBETA; T6D20.10; T6D20_10; phospholipase D beta 1", "gene_names_refseq": "PHOSPHOLIPASE D; PLDBETA1; PLDBETA; T6D20.10; T6D20_10; phospholipase D beta 1", "protein_names_uniprotkb": "Phospholipase D beta 1; 3.1.4.4; AtPLDbeta1; PLD beta 1; PLDbeta", "protein_names_refseq": "phospholipase D beta 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G42010)", "pathway_count": 1, "publication_count": 18, "publication_id_list": "10198096;10441386;10617197;10777500;11090221;11722757;11891260;18463617;20466843;23577648;25561503;26091701;27862469;28011693;30833711;9054397;9353280;9578608", "class_list": "", "function": "Hydrolyzes glycerol-phospholipids at the terminal phosphodiesteric bond to generate phosphatidic acids (PA). Plays an important role in various cellular processes, including phytohormone action, vesicular trafficking, secretion, cytoskeletal arrangement, meiosis, tumor promotion, pathogenesis, membrane deterioration and senescence. Involved in regulating stomatal movement and plant-water status (PubMed:11722757). Can use phosphatidylserine (PS) and phosphatidylethanolamine (PE) as substrates only in the presence of PIP2. Can use phosphatidylcholine (PC), phosphatidylglycerol (PG) or N-acylphosphatidylethanolamine (NAPE) as substrates in the presence of PE and PIP2 (PubMed:9578608). Modulates defense responses to bacterial and fungal pathogens (PubMed:23577648)., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 7, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "F4ILZ0;P93745", "ec_number_list": [ { "id": "3.1.4.4", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.4.4", "type": "external" } ], "go_molecular_function": "GO:0004630 phospholipase D activity;GO:0005546 phosphatidylinositol-4,5-bisphosphate binding;GO:0046872 metal ion binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005886 plasma membrane;GO:0009506 plasmodesma;GO:0016020 membrane", "go_biological_process": "GO:0009395 phospholipid catabolic process;GO:0042742 defense response to bacterium;GO:0016042 lipid catabolic process", "synthesized_glycan_count": 0, "hit_score": 1.9, "record_id": "P93733-1", "record_type": "protein", "filter_code": "0000000.0000101.010000.100000000000000000.0000000001001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q39055-1", "uniprot_id": [ { "id": "MOAA_ARATH", "url": "https://www.uniprot.org/uniprot/Q39055", "type": "external" } ], "mass": 43413.0, "length": 390, "protein_name": "GTP 3',8-cyclase", "gene_name": "CNX2", "organism": "Arabidopsis", "refseq_name": "cofactor of nitrate reductase and xanthine dehydrogenase 2", "refseq_ac": [ { "id": "NP_001031461", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001031461", "type": "external" } ], "gene_names_uniprotkb": "CNX2; F20M17.1; F22D22.30; F22D22_30", "gene_names_refseq": "AT2G31950; CNX2; F22D22.30; F22D22_30; cofactor of nitrate reductase and xanthine dehydrogenase 2", "protein_names_uniprotkb": "GTP 3',8-cyclase; 4.1.99.22; Molybdenum cofactor biosynthesis enzyme CNX2; Molybdopterin biosynthesis protein CNX2; Molybdopterin precursor Z synthase", "protein_names_refseq": "cofactor of nitrate reductase and xanthine dehydrogenase 2", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G31955)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "10617197;14593172;20164445;25732537;27862469;7890743", "class_list": "", "function": "Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8-dihydroguanosine 5'-triphosphate., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "F4IRV0;Q8LBF4", "ec_number_list": [ { "id": "4.1.99.22", "url": "https://www.rhea-db.org/rhea/?query=ec:4.1.99.22", "type": "external" } ], "go_molecular_function": "GO:0061798 GTP 3',8'-cyclase activity;GO:0061799 cyclic pyranopterin monophosphate synthase activity;GO:0005525 GTP binding;GO:0046872 metal ion binding;GO:0051539 4 iron, 4 sulfur cluster binding", "go_cellular_component": "GO:0005739 mitochondrion;GO:0005759 mitochondrial matrix;GO:0005783 endoplasmic reticulum;GO:0009507 chloroplast", "go_biological_process": "GO:0006777 Mo-molybdopterin cofactor biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q39055-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q38862-1", "uniprot_id": [ { "id": "INO2_ARATH", "url": "https://www.uniprot.org/uniprot/Q38862", "type": "external" } ], "mass": 56337.0, "length": 510, "protein_name": "Inositol-3-phosphate synthase isozyme 2", "gene_name": "IPS2; MIPS2", "organism": "Arabidopsis", "refseq_name": "myo-inositol-1-phosphate synthase 2", "refseq_ac": [ { "id": "NP_179812", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_179812", "type": "external" } ], "gene_names_uniprotkb": "IPS2; MIPS2; ATIPS2; ATMIPS1; ATMIPS2; MIPS1; MIPS2; T26C19.10", "gene_names_refseq": "ATIPS2; ATMIPS1; ATMIPS2; INOSITOL 3-PHOSPHATE SYNTHASE 2; MIPS1; MIPS2; MYO-INOSITOL-1-PHOSTPATE SYNTHASE 1; MYO-INOSITOL-1-PHOSTPATE SYNTHASE 2; myo-inositol-1-phosphate synthase 1; myo-inositol-1-phosphate synthase 2", "protein_names_uniprotkb": "Inositol-3-phosphate synthase isozyme 2; 5.5.1.4; AtIPS2; AtMIPS 2; MI-1-P synthase 2; MIP synthase 2; Myo-inositol 1-phosphate synthase 2", "protein_names_refseq": "myo-inositol-1-phosphate synthase 2", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G22240)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "10617197;14593172;18603618;18643983;19812700;20215587;27862469", "class_list": "", "function": "Key enzyme in myo-inositol biosynthesis pathway that catalyzes the conversion of glucose 6-phosphate to 1-myo-inositol 1-phosphate in a NAD-dependent manner., [UniProtKB, PubMed, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9SIE2", "ec_number_list": [ { "id": "5.5.1.4", "url": "https://www.rhea-db.org/rhea/?query=ec:5.5.1.4", "type": "external" } ], "go_molecular_function": "GO:0004512 inositol-3-phosphate synthase activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005634 nucleus;GO:0005829 cytosol", "go_biological_process": "GO:0051607 defense response to virus;GO:0042742 defense response to bacterium;GO:0050832 defense response to fungus;GO:0006021 inositol biosynthetic process;GO:0008654 phospholipid biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q38862-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q39211-1", "uniprot_id": [ { "id": "NRPB3_ARATH", "url": "https://www.uniprot.org/uniprot/Q39211", "type": "external" } ], "mass": 35461.0, "length": 319, "protein_name": "DNA-directed RNA polymerases II, IV and V subunit 3", "gene_name": "NRPB3", "organism": "Arabidopsis", "refseq_name": "DNA-directed RNA polymerase family protein", "refseq_ac": [ { "id": "NP_179145", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_179145", "type": "external" } ], "gene_names_uniprotkb": "NRPB3; F26H6.5; F26H6_5; NRPD3; NRPE3A; RBP36A; RPB35.5A; RPB36A", "gene_names_refseq": "F26H6.5; F26H6_5; NRPB3; NRPD3; NRPE3A; RBP36A; RPB35.5A", "protein_names_uniprotkb": "DNA-directed RNA polymerases II, IV and V subunit 3; DNA-directed RNA polymerase II 36 kDa polypeptide A; DNA-directed RNA polymerase II subunit RPB3-A; RNA polymerase II subunit 3-A; RNA polymerase II subunit B3-A", "protein_names_refseq": "DNA-directed RNA polymerase family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G15430)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "10617197;14593172;19110459;20466843;21620701;21811420;22223895;23637343;27862469;8617787", "class_list": "", "function": "DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Component of RNA polymerase II which synthesizes mRNA precursors and many functional non-coding RNAs. Pol II is the central component of the basal RNA polymerase II transcription machinery. It is composed of mobile elements that move relative to each other. NRPB3 is part of the core element with the central large cleft and the clamp element that moves to open and close the cleft. Component of RNA polymerases IV and V which mediate short-interfering RNAs (siRNA) accumulation and subsequent RNA-directed DNA methylation-dependent (RdDM) transcriptional gene silencing (TGS) of endogenous repeated sequences, including transposable elements., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0003677 DNA binding;GO:0046983 protein dimerization activity;GO:0003899 DNA-directed RNA polymerase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005730 nucleolus;GO:0005737 cytoplasm;GO:0005665 RNA polymerase II, core complex;GO:0000418 RNA polymerase IV complex", "go_biological_process": "GO:0006366 transcription by RNA polymerase II;GO:0010374 stomatal complex development;GO:0010375 stomatal complex patterning;GO:0006351 DNA-templated transcription", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "Q39211-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q0WSN2-1", "uniprot_id": [ { "id": "DAR2_ARATH", "url": "https://www.uniprot.org/uniprot/Q0WSN2", "type": "external" } ], "mass": 59426.0, "length": 528, "protein_name": "Protein DA1-related 2", "gene_name": "DAR2", "organism": "Arabidopsis", "refseq_name": "DA1-related protein 2", "refseq_ac": [ { "id": "NP_181513", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_181513", "type": "external" } ], "gene_names_uniprotkb": "DAR2; DA1-related protein 2; LATERAL ROOT DEVELOPMENT 3; LRD3; T5I7.13; T5I7_13", "gene_names_refseq": "DA1-related protein 2; DAR2; LATERAL ROOT DEVELOPMENT 3; LRD3; T5I7.13; T5I7_13", "protein_names_uniprotkb": "Protein DA1-related 2; Protein LATERAL ROOT DEVELOPMENT 3", "protein_names_refseq": "DA1-related protein 2", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G39830)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "10617197;18483219;21749503;23296689;25561503;25757472;27862469;28167503", "class_list": "", "function": "Acts redundantly with DA1 and DAR1 to regulate endoreduplication during leaf development. Together with DA1 and DAR1, modulates the protein stability of the transcription factors TCP14 and TCP15, which repress endoreduplication by directly regulating the expression of cell-cycle genes (PubMed:25757472). Involved in root phloem development. Is an essential component of early phloem development, long-distance delivery of phloem content, and proper maintenance of root system architecture (PubMed:21749503). Involved in the control of root meristem size. Functions genetically downstream of cytokinin and IAA3 to maintain normal auxin distribution by influencing polar auxin transport. Acts through the PLETHORA pathway, upstream of PLT1 and PLT2 to influence root stem cell niche activity and thus control root meristem size (PubMed:23296689)., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O22291", "ec_number_list": [], "go_molecular_function": "GO:0046872 metal ion binding;GO:0008233 peptidase activity;GO:0043130 ubiquitin binding", "go_cellular_component": "GO:0009507 chloroplast", "go_biological_process": "GO:0032875 regulation of DNA endoreduplication;GO:0010088 phloem development;GO:0048364 root development", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "Q0WSN2-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q39099-1", "uniprot_id": [ { "id": "XTH4_ARATH", "url": "https://www.uniprot.org/uniprot/Q39099", "type": "external" } ], "mass": 34291.0, "length": 296, "protein_name": "Xyloglucan endotransglucosylase/hydrolase protein 4", "gene_name": "XTH4", "organism": "Arabidopsis", "refseq_name": "xyloglucan endotransglucosylase/hydrolase 4", "refseq_ac": [ { "id": "NP_178708", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_178708", "type": "external" } ], "gene_names_uniprotkb": "XTH4; ENDOXYLOGLUCAN TRANSFERASE; EXGT-A1; EXT; T9F8.4; T9F8_4; endoxyloglucan transferase A1", "gene_names_refseq": "ENDOXYLOGLUCAN TRANSFERASE; EXGT-A1; EXT; T9F8.4; T9F8_4; XTH4; endoxyloglucan transferase A1; xyloglucan endotransglucosylase/hydrolase 4", "protein_names_uniprotkb": "Xyloglucan endotransglucosylase/hydrolase protein 4; 2.4.1.207; At-XTH4; XTH-4", "protein_names_refseq": "xyloglucan endotransglucosylase/hydrolase 4", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G06850)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "10406121;10557219;10617197;11673616;12514239;14593172;15593128;27862469;8244968;8696366", "class_list": "glycogene;glycosylhydrolase", "function": "Catalyzes xyloglucan endohydrolysis (XEH) and/or endotransglycosylation (XET). Cleaves and religates xyloglucan polymers, an essential constituent of the primary cell wall, and thereby participates in cell wall construction of growing tissues., [UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 1, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 1, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 1, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "Q94F33", "ec_number_list": [], "go_molecular_function": "GO:0030247 polysaccharide binding;GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds;GO:0016762 xyloglucan:xyloglucosyl transferase activity", "go_cellular_component": "GO:0005576 extracellular region;GO:0005737 cytoplasm;GO:0005739 mitochondrion;GO:0009506 plasmodesma;GO:0009505 plant-type cell wall", "go_biological_process": "GO:0009645 response to low light intensity stimulus;GO:0009612 response to mechanical stimulus;GO:0009826 unidimensional cell growth;GO:0071555 cell wall organization;GO:0009733 response to auxin", "synthesized_glycan_count": 0, "hit_score": 1.2, "record_id": "Q39099-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.1000000000000.100.10100", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q38912-1", "uniprot_id": [ { "id": "RAC3_ARATH", "url": "https://www.uniprot.org/uniprot/Q38912", "type": "external" } ], "mass": 21728.0, "length": 198, "protein_name": "Rac-like GTP-binding protein ARAC3", "gene_name": "ARAC3; RAC3", "organism": "Arabidopsis", "refseq_name": "RAC-like 3", "refseq_ac": [ { "id": "NP_001190916", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001190916", "type": "external" } ], "gene_names_uniprotkb": "ARAC3; RAC3; ARAC3; ATROP6; M4E13.80; M4E13_80; RAC-like 3; RAC1; RHO1PS; ROP6", "gene_names_refseq": "ARAC3; ATROP6; M4E13.80; M4E13_80; RAC-like 3; RAC3; RHO-RELATED PROTEIN FROM PLANTS 6; RHO1PS; ROP6", "protein_names_uniprotkb": "Rac-like GTP-binding protein ARAC3; 3.6.5.2; AtRAC1; GTPase protein ROP6", "protein_names_refseq": "RAC-like 3", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G35020)", "pathway_count": 1, "publication_count": 15, "publication_id_list": "10617198;10798620;11102387;11387211;14593172;17242203;17493810;22683260;27251533;27862469;30770391;31623377;8893552;9349271;9765526", "class_list": "", "function": "Inactive GDP-bound Rho GTPases reside in the cytosol, are found in a complex with Rho GDP-dissociation inhibitors (Rho GDIs), and are released from the GDI protein in order to translocate to membranes upon activation. Involved in cell polarity control during the actin-dependent tip growth of root hairs, thus regulating root hair length and root hair initiation (PubMed:11387211, PubMed:30770391). Contributes, in a SPK1-dependent manner, to the prevention of cortical microtubules organization into parallel arrays oriented perpendicular to the axis of cell elongation to limit anisotropic cell growth during petal development (PubMed:31623377). SPK1-dependent activation is required for auxin-mediated inhibition of PIN2 internalization during gravitropic responses (PubMed:22683260)., [UniProtKB, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "P92989;Q84W42", "ec_number_list": [ { "id": "3.6.5.2", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.5.2", "type": "external" }, { "id": "3.6.5.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.5.-", "type": "external" }, { "id": "3.6.5.3", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.5.3", "type": "external" }, { "id": "3.6.5.4", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.5.4", "type": "external" }, { "id": "3.6.5.5", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.5.5", "type": "external" }, { "id": "3.6.5.n1", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.5.n1", "type": "external" } ], "go_molecular_function": "GO:0003924 GTPase activity;GO:0005525 GTP binding;GO:0019901 protein kinase binding;GO:0019003 GDP binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005730 nucleolus;GO:0005737 cytoplasm;GO:0005739 mitochondrion;GO:0005819 spindle", "go_biological_process": "GO:0007015 actin filament organization;GO:0007165 signal transduction;GO:0032956 regulation of actin cytoskeleton organization;GO:0007264 small GTPase-mediated signal transduction;GO:0008360 regulation of cell shape", "synthesized_glycan_count": 0, "hit_score": 1.6, "record_id": "Q38912-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "O49404-1", "uniprot_id": [ { "id": "BEH3_ARATH", "url": "https://www.uniprot.org/uniprot/O49404", "type": "external" } ], "mass": 30908.0, "length": 284, "protein_name": "BES1/BZR1 homolog protein 3", "gene_name": "BEH3", "organism": "Arabidopsis", "refseq_name": "BES1/BZR1 homolog 3", "refseq_ac": [ { "id": "NP_193624", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_193624", "type": "external" } ], "gene_names_uniprotkb": "BEH3; BZR1 homolog 3; F13C5.60; F13C5_60", "gene_names_refseq": "BEH3; BES1/BZR1 homolog 3; F13C5.60; F13C5_60", "protein_names_uniprotkb": "BES1/BZR1 homolog protein 3", "protein_names_refseq": "BES1/BZR1 homolog 3", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G18890)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "10617198;11910074;15680330;23111157;27862469", "class_list": "", "function": "Functions in brassinosteroid signaling. May function as transcriptional repressor., [UniProtKB, UniProtKB]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0003677 DNA binding;GO:0003700 DNA-binding transcription factor activity", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006355 regulation of DNA-templated transcription;GO:0009742 brassinosteroid mediated signaling pathway", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "O49404-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000001001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "P94077-1", "uniprot_id": [ { "id": "LSD1_ARATH", "url": "https://www.uniprot.org/uniprot/P94077", "type": "external" } ], "mass": 20107.0, "length": 189, "protein_name": "Protein LSD1", "gene_name": "LSD1", "organism": "Arabidopsis", "refseq_name": "LSD1 zinc finger family protein", "refseq_ac": [ { "id": "NP_001031678", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001031678", "type": "external" } ], "gene_names_uniprotkb": "LSD1; CHS4; F9F13.30; F9F13_30; LESION SIMULATING DISEASE 1; LESION SIMULATING DISEASE", "gene_names_refseq": "F9F13.30; F9F13_30; LESION SIMULATING DISEASE 1; LESION SIMULATING DISEASE; LSD1", "protein_names_uniprotkb": "Protein LSD1; AtLSD1; Protein CHILLING SENSITIVE 4; Protein LESION SIMULATING DISEASE 1; Putative zinc finger LSD1", "protein_names_refseq": "LSD1 zinc finger family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G20380)", "pathway_count": 1, "publication_count": 19, "publication_id_list": "10550898;10617198;11595797;11844114;12732715;14593172;15347794;15469500;16957775;18055613;18790826;19423640;20456049;21097903;21526181;21811563;23958864;27862469;9054508", "class_list": "", "function": "Negative regulator of reactive oxygen-induced cell death, cold stress-induced cell death, pathogen-induced hypersensitive response (HR), basal disease resistance. May be involved in the induction of the copper/zinc superoxide dismutase CSD1 and CSD2 that detoxify accumulating superoxide before the reactive oxygen species (ROS) can trigger a cell death cascade. LSD1 and LOL1 have antagonistic effects on CSD1 and CSD2 accumulation to regulate oxidative stress-induced cell death. Antagonizes the function of BZIP10, a positive regulator of cell death, by interacting in the cytoplasm and preventing its nuclear localization. Controls lysigenous aerenchyma in hypocotyls under root hypoxia. Required for leaf acclimation in response to excess excitation energy., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "C0Z316;Q8RXL2", "ec_number_list": [], "go_molecular_function": "GO:0003700 DNA-binding transcription factor activity", "go_cellular_component": "GO:0005576 extracellular region;GO:0005634 nucleus;GO:0005737 cytoplasm", "go_biological_process": "GO:0000303 response to superoxide;GO:0001666 response to hypoxia;GO:0043069 negative regulation of programmed cell death;GO:0010310 regulation of hydrogen peroxide metabolic process;GO:0009626 plant-type hypersensitive response", "synthesized_glycan_count": 0, "hit_score": 2.0, "record_id": "P94077-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q0WPU1-1", "uniprot_id": [ { "id": "MYO15_ARATH", "url": "https://www.uniprot.org/uniprot/Q0WPU1", "type": "external" } ], "mass": 173363.0, "length": 1522, "protein_name": "Myosin-15", "gene_name": "XI-I", "organism": "Arabidopsis", "refseq_name": "myosin", "refseq_ac": [ { "id": "NP_195046", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_195046", "type": "external" } ], "gene_names_uniprotkb": "XI-I; ATXI-I; F4I10.130; F4I10_130; KAKU1; MYOSIN XI I; MYOSIN XI-15; XI-15", "gene_names_refseq": "ATXI-I; F4I10.130; F4I10_130; MYOSIN XI I; MYOSIN XI-15; XI-15; XI-I", "protein_names_uniprotkb": "Myosin-15; AtXI-I; Myosin XI I", "protein_names_refseq": "myosin", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G33200)", "pathway_count": 1, "publication_count": 17, "publication_id_list": "10617198;10984423;11516337;17288617;17500056;19369591;20581304;21233331;21914656;22060019;23973298;23995081;25561503;25740919;25759303;26187819;27862469", "class_list": "", "function": "Myosin heavy chain that is required for the cell cycle-regulated transport of various organelles and proteins for their segregation. Functions by binding with its tail domain to receptor proteins on organelles and exerting force with its N-terminal motor domain against actin filaments, thereby transporting its cargo along polarized actin cables. Involved in trafficking of Golgi stacks and mitochondria. Plays a role in nuclear shape determination. Drives nuclear movement along actin filaments (PubMed:23973298). As component of the SUN-WIP-WIT2-KAKU1 complex, mediates the transfer of cytoplasmic forces to the nuclear envelope (NE), leading to nuclear shape changes (PubMed:25759303)., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 3, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "Q9SMY9", "ec_number_list": [], "go_molecular_function": "GO:0005516 calmodulin binding;GO:0005524 ATP binding;GO:0051015 actin filament binding;GO:0003774 cytoskeletal motor activity;GO:0000146 microfilament motor activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0015629 actin cytoskeleton;GO:0016020 membrane;GO:0031965 nuclear membrane", "go_biological_process": "GO:0007015 actin filament organization;GO:0030048 actin filament-based movement;GO:0007097 nuclear migration;GO:2000769 regulation of establishment or maintenance of cell polarity regulating cell shape", "synthesized_glycan_count": 0, "hit_score": 1.8, "record_id": "Q0WPU1-1", "record_type": "protein", "filter_code": "0000000.0000101.010000.100000000000000000.0000000001001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "P92965-1", "uniprot_id": [ { "id": "RS40_ARATH", "url": "https://www.uniprot.org/uniprot/P92965", "type": "external" } ], "mass": 40319.0, "length": 350, "protein_name": "Serine/arginine-rich splicing factor RS40", "gene_name": "RS40", "organism": "Arabidopsis", "refseq_name": "arginine/serine-rich splicing factor 35", "refseq_ac": [ { "id": "NP_001078447", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001078447", "type": "external" } ], "gene_names_uniprotkb": "RS40; AT-SRP40; ATRSP35; ATRSP40; At-RS40; M7J2.130; RSP35; RSP40; SPLICING FACTOR AT-SRP40; T30C3.9", "gene_names_refseq": "ARABIDOPSIS THALIANA ARGININE/SERINE-RICH SPLICING FACTOR 35; ARGININE/SERINE-RICH SPLICING FACTOR; AT-SRP40; ATRSP35; ATRSP40; At-RS40; RS40; RSP35; SPLICING FACTOR AT-SRP40; T30C3.9; arginine/serine-rich splicing factor 35; arginine/serine-rich splicing factor 40", "protein_names_uniprotkb": "Serine/arginine-rich splicing factor RS40; At-RSp40; AtRS40", "protein_names_refseq": "arginine/serine-rich splicing factor 35", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G25500)", "pathway_count": 1, "publication_count": 39, "publication_id_list": "10617198;15133128;15987817;16497658;16520337;16807317;16936312;17319848;18463617;19245862;19253305;19341826;19376835;19423640;20466843;20884799;21768351;21935421;22074104;22440515;22631563;23111157;23328941;23572148;23660473;23776212;23820729;24043427;24146632;24924143;25561503;26091701;26227967;27419465;27862469;28011693;29654922;30833711;8989882", "class_list": "", "function": "Required for constitutive and alternative pre-mRNA splicing (Probable). Involved in primary miRNA processing and pri-miRNA biogenesis. Binds both intronless and intron-containing pri-miRNAs (PubMed:26227967)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 30, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A8MRZ9;B9DH58;F4JSN1;Q96333", "ec_number_list": [], "go_molecular_function": "GO:0003729 mRNA binding;GO:0003723 RNA binding", "go_cellular_component": "GO:0005634 nucleus;GO:0016607 nuclear speck;GO:0005681 spliceosomal complex;GO:0010445 nuclear dicing body", "go_biological_process": "GO:0008380 RNA splicing;GO:0000398 mRNA splicing, via spliceosome;GO:0031053 primary miRNA processing;GO:0000381 regulation of alternative mRNA splicing, via spliceosome;GO:0006397 mRNA processing", "synthesized_glycan_count": 0, "hit_score": 4.0, "record_id": "P92965-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q39050-1", "uniprot_id": [ { "id": "CKL11_ARATH", "url": "https://www.uniprot.org/uniprot/Q39050", "type": "external" } ], "mass": 51953.0, "length": 457, "protein_name": "Casein kinase 1-like protein 11", "gene_name": "CKI1; CKL11", "organism": "Arabidopsis", "refseq_name": "casein kinase I", "refseq_ac": [ { "id": "NP_193170", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_193170", "type": "external" } ], "gene_names_uniprotkb": "CKI1; CKL11; CASEIN KINASE I-LIKE 11; CKI1; CKL11; DL3210C; FCAALL.68; casein kinase I; dl3210c", "gene_names_refseq": "CASEIN KINASE I-LIKE 11; CKI1; CKL11; DL3210C; FCAALL.68; casein kinase I", "protein_names_uniprotkb": "Casein kinase 1-like protein 11; 2.7.11.1; Protein CASEIN KINASE I-LIKE 11", "protein_names_refseq": "casein kinase I", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G14340)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "10617198;10929106;14593172;16126836;25561503;27862469;7480353;9461215", "class_list": "", "function": "Casein kinases are operationally defined by their preferential utilization of acidic proteins such as caseins as substrates. Can phosphorylate casein, phosvitin, myosin light chains and poly(Glu,Tyr) in vitro., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [ { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.3.2.27", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.2.27", "type": "external" }, { "id": "2.7.10.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.-", "type": "external" }, { "id": "3.1.4.46", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.4.46", "type": "external" }, { "id": "2.7.11.25", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.25", "type": "external" }, { "id": "2.7.11.22", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.22", "type": "external" }, { "id": "2.7.10.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.1", "type": "external" }, { "id": "2.7.11.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.-", "type": "external" }, { "id": "2.7.11.24", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.24", "type": "external" }, { "id": "2.7.12.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.1", "type": "external" }, { "id": "2.7.11.23", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.23", "type": "external" }, { "id": "2.7.12.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.2", "type": "external" }, { "id": "2.7.-.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.-.-", "type": "external" }, { "id": "3.1.26.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.26.-", "type": "external" }, { "id": "3.1.3.16", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.16", "type": "external" }, { "id": "2.7.11.34", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.34", "type": "external" }, { "id": "4.6.1.2", "url": "https://www.rhea-db.org/rhea/?query=ec:4.6.1.2", "type": "external" } ], "go_molecular_function": "GO:0004674 protein serine/threonine kinase activity;GO:0005524 ATP binding;GO:0106310 protein serine kinase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005739 mitochondrion", "go_biological_process": "GO:0006897 endocytosis;GO:0007165 signal transduction;GO:0046777 protein autophosphorylation;GO:0016310 phosphorylation", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "Q39050-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q0WUR5-1", "uniprot_id": [ { "id": "FAB1A_ARATH", "url": "https://www.uniprot.org/uniprot/Q0WUR5", "type": "external" } ], "mass": 196193.0, "length": 1757, "protein_name": "1-phosphatidylinositol-3-phosphate 5-kinase FAB1A", "gene_name": "FAB1A", "organism": "Arabidopsis", "refseq_name": "1-phosphatidylinositol-3-phosphate 5-kinase FAB1A", "refseq_ac": [ { "id": "NP_001320122", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001320122", "type": "external" } ], "gene_names_uniprotkb": "FAB1A; F4I10.170; F4I10_170", "gene_names_refseq": "F4I10.170; F4I10_170; FAB1A; FORMS APLOID AND BINUCLEATE CELLS 1A", "protein_names_uniprotkb": "1-phosphatidylinositol-3-phosphate 5-kinase FAB1A; 2.7.1.150; FYVE finger-containing phosphoinositide kinase; PIKfyve; PIPkin-III; Phosphatidylinositol 3-phosphate 5-kinase type III; Phosphatidylinositol 3-phosphate 5-kinase; Protein FORMS APLOID AND BINUCLEATE CELLS 1A; Type III PIP kinase", "protein_names_refseq": "1-phosphatidylinositol-3-phosphate 5-kinase FAB1A", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G33240)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "10617198;12226484;19846542;21173023;21412048;22060019;24043427;25561503;27862469;28011693", "class_list": "", "function": "The PI(3,5)P2 regulatory complex regulates both the synthesis and turnover of phosphatidylinositol 3,5-bisphosphate (PtdIns(3,5)P2). Catalyzes the phosphorylation of phosphatidylinositol 3-phosphate on the fifth hydroxyl of the myo-inositol ring, to form phosphatidylinositol 3,5-bisphosphate (By similarity). Plays an important role in maintenance of endomembrane homeostasis including endocytosis, vacuole formation, and vacuolar acidification processes. Required for development of viable pollen. Might mediate recycling of auxin transporters., [UniProtKB, PubMed, PubMed, PubMed, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 15, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9SMY5", "ec_number_list": [ { "id": "2.7.1.150", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.150", "type": "external" }, { "id": "2.7.1.68", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.68", "type": "external" } ], "go_molecular_function": "GO:0005524 ATP binding;GO:0008270 zinc ion binding;GO:0000285 1-phosphatidylinositol-3-phosphate 5-kinase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005768 endosome;GO:0010008 endosome membrane", "go_biological_process": "GO:0007033 vacuole organization;GO:0010256 endomembrane system organization;GO:0046854 phosphatidylinositol phosphate biosynthetic process;GO:0009555 pollen development;GO:0046488 phosphatidylinositol metabolic process", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "Q0WUR5-1", "record_type": "protein", "filter_code": "0000000.0000101.010000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q39110-1", "uniprot_id": [ { "id": "GAOX1_ARATH", "url": "https://www.uniprot.org/uniprot/Q39110", "type": "external" } ], "mass": 43224.0, "length": 377, "protein_name": "Gibberellin 20 oxidase 1", "gene_name": "GA20OX1", "organism": "Arabidopsis", "refseq_name": "2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein", "refseq_ac": [ { "id": "NP_194272", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_194272", "type": "external" } ], "gene_names_uniprotkb": "GA20OX1; 20ox1; AT2301; ATGA20OX1; At2301; GA REQUIRING 5; GA5; GIBBERELLIN 20-OXIDASE; T30C3.90; T30C3_90", "gene_names_refseq": "ARABIDOPSIS THALIANA GIBBERELLIN 20-OXIDASE 1; AT2301; ATGA20OX1; GA REQUIRING 5; GA20OX1; GA5; GIBBERELLIN 20-OXIDASE; T30C3.90; T30C3_90", "protein_names_uniprotkb": "Gibberellin 20 oxidase 1; 1.14.11.-; AtGA20ox1; GA 20-oxidase 1; Gibberellin C-20 oxidase 1", "protein_names_refseq": "2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G25420)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "10617198;14729916;15923331;16905669;18069939;21056641;27862469;7604047;7630935", "class_list": "", "function": "Key oxidase enzyme in the biosynthesis of gibberellin that catalyzes the conversion of GA12 to GA9, via a three-step oxidation at C-20 of the GA skeleton. GA53 is less effectively oxidized than GA12 and is only oxidized one step to GA44 (PubMed:7630935). Involved in the promotion of the floral transition, fertility and silique elongation, but plays only a minor role in elongation of seedling organs. Acts redundantly with GA20OX2 (PubMed:18069939)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q38844;Q9FYN4;Q9FYN5;Q9STJ5", "ec_number_list": [ { "id": "1.14.11.-", "url": "https://www.rhea-db.org/rhea/?query=ec:1.14.11.-", "type": "external" } ], "go_molecular_function": "GO:0046872 metal ion binding;GO:0045544 gibberellin 20-oxidase activity", "go_cellular_component": "GO:0005737 cytoplasm", "go_biological_process": "GO:0009416 response to light stimulus;GO:0009740 gibberellic acid mediated signaling pathway;GO:0009686 gibberellin biosynthetic process;GO:0009739 response to gibberellin;GO:0048366 leaf development", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "Q39110-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q38898-1", "uniprot_id": [ { "id": "AKT2_ARATH", "url": "https://www.uniprot.org/uniprot/Q38898", "type": "external" } ], "mass": 91308.0, "length": 802, "protein_name": "Potassium channel AKT2/3", "gene_name": "3; AKT2", "organism": "Arabidopsis", "refseq_name": "potassium transport 2/3", "refseq_ac": [ { "id": "NP_567651", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_567651", "type": "external" } ], "gene_names_uniprotkb": "3; AKT2; 3; AKT2; AKT3; T10I14.30; T10I14_30", "gene_names_refseq": "AKT2/3; AKT2; AKT3; KT2/3; T10I14.30; T10I14_30; potassium transport 2/3", "protein_names_uniprotkb": "Potassium channel AKT2/3", "protein_names_refseq": "potassium transport 2/3", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G22200)", "pathway_count": 1, "publication_count": 16, "publication_id_list": "10377458;10617198;10852932;11181729;11500563;12034902;12172027;12447548;12678562;21445013;21445098;27002025;27862469;8549795;8552711;9916143", "class_list": "", "function": "Highly selective and weak inward-rectifying potassium channel. Plays a role in both loading and unloading potassium into/from the phloem sap. Seems to control sugar loading into phloem via a voltage-dependent process. Blocked by physiological concentrations of external calcium and by external acidification. May interact with the cytoskeleton or with regulatory proteins. Dephosphorylation by PP2CA not only leads to the inhibition of potassium currents but also to an increase of the voltage-dependence of the channel. Regulated by the CBL4/CIPK6 calcium sensor/protein kinase complex via a kinase interaction-dependent but phosphorylation-independent translocation of the channel to the plasma membrane., [UniProtKB, PubMed, PubMed]; Potassium channel., [UniProtKB, UniProtKB]", "predicted_glycosites": 2, "predicted_n_glycosites": 2, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 3, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 2, "binding_glycan_count": 0, "secondary_ac_list": "Q0WMS8;Q42408;Q9M0L6", "ec_number_list": [], "go_molecular_function": "GO:0042802 identical protein binding;GO:0005242 inward rectifier potassium channel activity;GO:0005249 voltage-gated potassium channel activity", "go_cellular_component": "GO:0005739 mitochondrion;GO:0005789 endoplasmic reticulum membrane;GO:0034702 monoatomic ion channel complex;GO:0009506 plasmodesma", "go_biological_process": "GO:0042391 regulation of membrane potential;GO:0009737 response to abscisic acid", "synthesized_glycan_count": 0, "hit_score": 1.7, "record_id": "Q38898-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000010001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q05763-1", "uniprot_id": [ { "id": "DRTS2_ARATH", "url": "https://www.uniprot.org/uniprot/Q05763", "type": "external" } ], "mass": 63209.0, "length": 565, "protein_name": "Bifunctional dihydrofolate reductase-thymidylate synthase 2", "gene_name": "DHFR-TS2; THY-2", "organism": "Arabidopsis", "refseq_name": "thymidylate synthase 2", "refseq_ac": [ { "id": "NP_001328948", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001328948", "type": "external" } ], "gene_names_uniprotkb": "DHFR-TS2; THY-2; T4L20.150; T4L20_150; THY-2; thymidylate synthase 2", "gene_names_refseq": "DIHYDROFOLATE REDUCTASE-THYMIDYLATE SYNTHASE; T4L20.150; T4L20_150; THY-2; thymidylate synthase 2", "protein_names_uniprotkb": "Bifunctional dihydrofolate reductase-thymidylate synthase 2; DHFR-TS 2", "protein_names_refseq": "thymidylate synthase 2", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G34570)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "10617198;14593172;27862469;8374616", "class_list": "", "function": "Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism. Can play two different roles depending on the source of dihydrofolate: de novo synthesis of tetrahydrofolate or recycling of the dihydrofolate released as one of the end products of the TS catalyzed reaction. Catalyzes an essential reaction for de novo glycine and purine synthesis, DNA precursor synthesis, and for the conversion of dUMP to dTMP., [UniProtKB, UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q0WT35", "ec_number_list": [ { "id": "1.5.1.3", "url": "https://www.rhea-db.org/rhea/?query=ec:1.5.1.3", "type": "external" }, { "id": "2.1.1.45", "url": "https://www.rhea-db.org/rhea/?query=ec:2.1.1.45", "type": "external" } ], "go_molecular_function": "GO:0004146 dihydrofolate reductase activity;GO:0004799 thymidylate synthase activity;GO:0008168 methyltransferase activity", "go_cellular_component": "GO:0005739 mitochondrion;GO:0005829 cytosol;GO:0009507 chloroplast;GO:0005737 cytoplasm", "go_biological_process": "GO:0006231 dTMP biosynthetic process;GO:0006730 one-carbon metabolic process;GO:0032259 methylation;GO:0009257 10-formyltetrahydrofolate biosynthetic process;GO:0046654 tetrahydrofolate biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "Q05763-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1JPL4-1", "uniprot_id": [ { "id": "NDB1_ARATH", "url": "https://www.uniprot.org/uniprot/Q1JPL4", "type": "external" } ], "mass": 63314.0, "length": 571, "protein_name": "External alternative NAD(P)H-ubiquinone oxidoreductase B1, mitochondrial", "gene_name": "NDB1", "organism": "Arabidopsis", "refseq_name": "NAD(P)H dehydrogenase B1", "refseq_ac": [ { "id": "NP_567801", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_567801", "type": "external" } ], "gene_names_uniprotkb": "NDB1; F26K10.100; F26K10_100; NAD(P)H dehydrogenase B1", "gene_names_refseq": "F26K10.100; F26K10_100; NAD(P)H dehydrogenase B1; NDB1", "protein_names_uniprotkb": "External alternative NAD(P)H-ubiquinone oxidoreductase B1, mitochondrial; 1.6.5.9; External alternative NADH dehydrogenase NDB1; NADH:ubiquinone reductase (non-electrogenic) NDB1", "protein_names_refseq": "NAD(P)H dehydrogenase B1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G28220)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "10617198;12972666;15725055;16258072;17673460;18703057;27862469", "class_list": "", "function": "Alternative NADH-ubiquinone oxidoreductase which catalyzes the oxidation of mitochondrial NADH does not translocate protons across the inner mitochondrial membrane (By similarity). Calcium-dependent NAD(P)H dehydrogenase. Binds calcium ions., [UniProtKB, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "Q8LDE7;Q9M0I5", "ec_number_list": [ { "id": "1.6.5.9", "url": "https://www.rhea-db.org/rhea/?query=ec:1.6.5.9", "type": "external" }, { "id": "1.6.5.2", "url": "https://www.rhea-db.org/rhea/?query=ec:1.6.5.2", "type": "external" }, { "id": "1.6.5.12", "url": "https://www.rhea-db.org/rhea/?query=ec:1.6.5.12", "type": "external" } ], "go_molecular_function": "GO:0005509 calcium ion binding;GO:0016491 oxidoreductase activity;GO:0003959 NADPH dehydrogenase activity;GO:0120555 NADH dehydrogenase (ubiquinone) (non-electrogenic) activity;GO:0003954 NADH dehydrogenase activity", "go_cellular_component": "GO:0005739 mitochondrion;GO:0005743 mitochondrial inner membrane;GO:0005758 mitochondrial intermembrane space;GO:0005777 peroxisome", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q1JPL4-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q0PW40-1", "uniprot_id": [ { "id": "CRK13_ARATH", "url": "https://www.uniprot.org/uniprot/Q0PW40", "type": "external" } ], "mass": 75295.0, "length": 673, "protein_name": "Cysteine-rich receptor-like protein kinase 13", "gene_name": "CRK13", "organism": "Arabidopsis", "refseq_name": "cysteine-rich RLK (RECEPTOR-like protein kinase) 13", "refseq_ac": [ { "id": "NP_001078435", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001078435", "type": "external" } ], "gene_names_uniprotkb": "CRK13; F21P8.100; F21P8_100; HIG1; HIGH INDOLIC GLUCOSINOLATE 1", "gene_names_refseq": "CRK13; F21P8.100; F21P8_100; HIG1; HIGH INDOLIC GLUCOSINOLATE 1; cysteine-rich RLK (RECEPTOR-like protein kinase) 13", "protein_names_uniprotkb": "Cysteine-rich receptor-like protein kinase 13; 2.7.11.-; Cysteine-rich RLK13", "protein_names_refseq": "cysteine-rich RLK (RECEPTOR-like protein kinase) 13", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G23210)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "10617198;11402176;14593172;17419849;27862469", "class_list": "", "function": "", "predicted_glycosites": 10, "predicted_n_glycosites": 9, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 3, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 10, "binding_glycan_count": 0, "secondary_ac_list": "O65473;Q8H0Y5;Q8H1R8", "ec_number_list": [ { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.3.2.27", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.2.27", "type": "external" }, { "id": "2.7.10.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.-", "type": "external" }, { "id": "3.1.4.46", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.4.46", "type": "external" }, { "id": "2.7.11.25", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.25", "type": "external" }, { "id": "2.7.11.22", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.22", "type": "external" }, { "id": "2.7.10.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.1", "type": "external" }, { "id": "2.7.11.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.-", "type": "external" }, { "id": "2.7.11.24", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.24", "type": "external" }, { "id": "2.7.12.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.1", "type": "external" }, { "id": "2.7.11.23", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.23", "type": "external" }, { "id": "2.7.12.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.2", "type": "external" }, { "id": "2.7.-.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.-.-", "type": "external" }, { "id": "3.1.26.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.26.-", "type": "external" }, { "id": "3.1.3.16", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.16", "type": "external" }, { "id": "2.7.11.34", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.34", "type": "external" }, { "id": "4.6.1.2", "url": "https://www.rhea-db.org/rhea/?query=ec:4.6.1.2", "type": "external" } ], "go_molecular_function": "GO:0004674 protein serine/threonine kinase activity;GO:0005524 ATP binding;GO:0106310 protein serine kinase activity", "go_cellular_component": "GO:0005576 extracellular region;GO:0005886 plasma membrane;GO:0016020 membrane", "go_biological_process": "GO:0007165 signal transduction;GO:0042742 defense response to bacterium;GO:0002237 response to molecule of bacterial origin;GO:0009626 plant-type hypersensitive response", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q0PW40-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000011001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q11207-1", "uniprot_id": [ { "id": "PARP2_ARATH", "url": "https://www.uniprot.org/uniprot/Q11207", "type": "external" } ], "mass": 72176.0, "length": 637, "protein_name": "Poly [ADP-ribose] polymerase 2", "gene_name": "PARP2", "organism": "Arabidopsis", "refseq_name": "poly(ADP-ribose) polymerase", "refseq_ac": [ { "id": "NP_001329308", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001329308", "type": "external" } ], "gene_names_uniprotkb": "PARP2; APP; ATPARP1; PARP1; POLY(ADP-RIBOSE) POLYMERASE 1; POLY(ADP-RIBOSE) POLYMERASE; PP; T14P8.19; T14P8_19; poly(ADP-ribose) polymerase 2; poly(ADP-ribose) polymerase", "gene_names_refseq": "APP; ATPARP1; PARP1; PARP2; POLY(ADP-RIBOSE) POLYMERASE 1; POLY(ADP-RIBOSE) POLYMERASE; PP; T14P8.19; T14P8_19; poly(ADP-ribose) polymerase 2; poly(ADP-ribose) polymerase", "protein_names_uniprotkb": "Poly [ADP-ribose] polymerase 2; 2.4.2.-; 2.4.2.30; ADPRT-2; NAD(+) ADP-ribosyltransferase 2; PARP-2; Poly[ADP-ribose] synthase 2; Protein ADP-ribosyltransferase PARP2", "protein_names_refseq": "poly(ADP-ribose) polymerase", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G02390)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "10617198;11523787;23572148;27862469;7750552", "class_list": "glycogene;glycosyltransferase", "function": "Involved in the base excision repair (BER) pathway, by catalyzing the poly(ADP-ribosyl)ation of a limited number of acceptor proteins involved in chromatin architecture and in DNA metabolism. This modification follows DNA damages and appears as an obligatory step in a detection/signaling pathway leading to the reparation of DNA strand breaks (By similarity)., [UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O81294", "ec_number_list": [ { "id": "2.4.2.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.4.2.-", "type": "external" }, { "id": "2.4.2.30", "url": "https://www.rhea-db.org/rhea/?query=ec:2.4.2.30", "type": "external" } ], "go_molecular_function": "GO:1990404 NAD+-protein mono-ADP-ribosyltransferase activity;GO:0003677 DNA binding;GO:0016779 nucleotidyltransferase activity;GO:0003950 NAD+ poly-ADP-ribosyltransferase activity;GO:0140806 NAD+-protein-aspartate ADP-ribosyltransferase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005730 nucleolus", "go_biological_process": "GO:0006302 double-strand break repair;GO:0006303 double-strand break repair via nonhomologous end joining;GO:0070212 protein poly-ADP-ribosylation;GO:0030592 DNA ADP-ribosylation;GO:0006139 nucleobase-containing compound metabolic process", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q11207-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.11000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q0WNY5-1", "uniprot_id": [ { "id": "WAKLN_ARATH", "url": "https://www.uniprot.org/uniprot/Q0WNY5", "type": "external" } ], "mass": 88754.0, "length": 793, "protein_name": "Wall-associated receptor kinase-like 18", "gene_name": "WAKL18", "organism": "Arabidopsis", "refseq_name": "Wall-associated kinase family protein", "refseq_ac": [ { "id": "NP_194840", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_194840", "type": "external" } ], "gene_names_uniprotkb": "WAKL18; F6E21.30; F6E21_30", "gene_names_refseq": "F6E21.30; F6E21_30", "protein_names_uniprotkb": "Wall-associated receptor kinase-like 18; 2.7.11.-", "protein_names_refseq": "Wall-associated kinase family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G31110)", "pathway_count": 1, "publication_count": 3, "publication_id_list": "10617198;12068092;27862469", "class_list": "", "function": "Serine/threonine-protein kinase that may function as a signaling receptor of extracellular matrix component., [UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 6, "predicted_n_glycosites": 6, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 5, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 6, "binding_glycan_count": 0, "secondary_ac_list": "Q9M091", "ec_number_list": [ { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.3.2.27", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.2.27", "type": "external" }, { "id": "2.7.10.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.-", "type": "external" }, { "id": "3.1.4.46", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.4.46", "type": "external" }, { "id": "2.7.11.25", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.25", "type": "external" }, { "id": "2.7.11.22", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.22", "type": "external" }, { "id": "2.7.10.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.1", "type": "external" }, { "id": "2.7.11.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.-", "type": "external" }, { "id": "2.7.11.24", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.24", "type": "external" }, { "id": "2.7.12.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.1", "type": "external" }, { "id": "2.7.11.23", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.23", "type": "external" }, { "id": "2.7.12.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.2", "type": "external" }, { "id": "2.7.-.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.-.-", "type": "external" }, { "id": "3.1.26.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.26.-", "type": "external" }, { "id": "3.1.3.16", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.16", "type": "external" }, { "id": "2.7.11.34", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.34", "type": "external" }, { "id": "4.6.1.2", "url": "https://www.rhea-db.org/rhea/?query=ec:4.6.1.2", "type": "external" } ], "go_molecular_function": "GO:0030247 polysaccharide binding;GO:0004674 protein serine/threonine kinase activity;GO:0005524 ATP binding;GO:0005509 calcium ion binding;GO:0106310 protein serine kinase activity", "go_cellular_component": "GO:0005576 extracellular region;GO:0005634 nucleus;GO:0005886 plasma membrane;GO:0016020 membrane", "go_biological_process": "GO:0006952 defense response;GO:0007166 cell surface receptor signaling pathway", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "Q0WNY5-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000010001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "P53799-1", "uniprot_id": [ { "id": "FDFT1_ARATH", "url": "https://www.uniprot.org/uniprot/P53799", "type": "external" } ], "mass": 47142.0, "length": 410, "protein_name": "Squalene synthase 1", "gene_name": "SQS1", "organism": "Arabidopsis", "refseq_name": "squalene synthase 1", "refseq_ac": [ { "id": "NP_195190", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_195190", "type": "external" } ], "gene_names_uniprotkb": "SQS1; ERG9; SQUALENE SYNTHASE; T4L20.220; T4L20_220; squalene synthase 1", "gene_names_refseq": "ERG9; SQS1; SQUALENE SYNTHASE; T4L20.220; T4L20_220; squalene synthase 1", "protein_names_uniprotkb": "Squalene synthase 1; 2.5.1.21; FPP:FPP farnesyltransferase 1; Farnesyl-diphosphate farnesyltransferase 1; SQS 1; SS 1", "protein_names_refseq": "squalene synthase 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G34640)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "10617198;14593172;18236008;22223895;27862469;7892265;9363754", "class_list": "", "function": "Catalyzes the condensation of 2 farnesyl pyrophosphate (FPP) moieties to form squalene., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [ { "id": "2.5.1.21", "url": "https://www.rhea-db.org/rhea/?query=ec:2.5.1.21", "type": "external" } ], "go_molecular_function": "GO:0051996 squalene synthase [NAD(P)H] activity;GO:0055056 D-glucose transmembrane transporter activity", "go_cellular_component": "GO:0005739 mitochondrion;GO:0005783 endoplasmic reticulum;GO:0005886 plasma membrane;GO:0005789 endoplasmic reticulum membrane", "go_biological_process": "GO:0016126 sterol biosynthetic process;GO:0008299 isoprenoid biosynthetic process;GO:0045338 farnesyl diphosphate metabolic process;GO:0008610 lipid biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "P53799-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q38849-1", "uniprot_id": [ { "id": "KAT2_ARATH", "url": "https://www.uniprot.org/uniprot/Q38849", "type": "external" } ], "mass": 80150.0, "length": 697, "protein_name": "Potassium channel KAT2", "gene_name": "KAT2", "organism": "Arabidopsis", "refseq_name": "potassium channel KAT1-like protein", "refseq_ac": [ { "id": "NP_001329801", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001329801", "type": "external" } ], "gene_names_uniprotkb": "KAT2; T9A21.140; T9A21_140", "gene_names_refseq": "KAT2; T9A21.140; T9A21_140; VOLTAGE-GATED POTASSIUM CHANNEL 2; potassium channel in Arabidopsis thaliana 2", "protein_names_uniprotkb": "Potassium channel KAT2", "protein_names_refseq": "potassium channel KAT1-like protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G18290)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "10617198;11042178;11500563;27002025;27862469", "class_list": "", "function": "Highly selective inward-rectifying potassium channel. This voltage-dependent channel could mediate long-term potassium influx into guard cells leading to stomatal opening. Assuming opened or closed conformations in response to the voltage difference across the membrane, the channel is activated by hyperpolarization. The channel activity is enhanced upon external acidification., [UniProtKB]; Potassium channel., [UniProtKB, UniProtKB]", "predicted_glycosites": 1, "predicted_n_glycosites": 1, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "O49732;Q9C5V9", "ec_number_list": [], "go_molecular_function": "GO:0005242 inward rectifier potassium channel activity;GO:0005249 voltage-gated potassium channel activity", "go_cellular_component": "GO:0005634 nucleus;GO:0034702 monoatomic ion channel complex;GO:0009507 chloroplast", "go_biological_process": "GO:0007623 circadian rhythm;GO:0009644 response to high light intensity;GO:0010118 stomatal movement", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q38849-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000010001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "P82281-1", "uniprot_id": [ { "id": "TL29_ARATH", "url": "https://www.uniprot.org/uniprot/P82281", "type": "external" } ], "mass": 37934.0, "length": 349, "protein_name": "Thylakoid lumenal 29 kDa protein, chloroplastic", "gene_name": "TL29", "organism": "Arabidopsis", "refseq_name": "ascorbate peroxidase 4", "refseq_ac": [ { "id": "NP_192640", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_192640", "type": "external" } ], "gene_names_uniprotkb": "TL29; APX4; F23J3.40; F23J3_40; ascorbate peroxidase 4; thylakoid lumen 29", "gene_names_refseq": "APX4; F23J3.40; F23J3_40; TL29; ascorbate peroxidase 4; thylakoid lumen 29", "protein_names_uniprotkb": "Thylakoid lumenal 29 kDa protein, chloroplastic; 1.-.-.-; AtAPx07; P29; Probable L-ascorbate peroxidase 4; TL29", "protein_names_refseq": "ascorbate peroxidase 4", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G09010)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "10617198;11034343;11719511;12068123;14593172;16034597;19828564;22092075;27862469", "class_list": "", "function": "", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q7XZP6;Q9M0S6", "ec_number_list": [], "go_molecular_function": "GO:0020037 heme binding;GO:0004601 peroxidase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005829 cytosol;GO:0009535 chloroplast thylakoid membrane;GO:0009507 chloroplast", "go_biological_process": "GO:0034599 cellular response to oxidative stress;GO:0000302 response to reactive oxygen species;GO:0042744 hydrogen peroxide catabolic process", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "P82281-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q39203-1", "uniprot_id": [ { "id": "SD22_ARATH", "url": "https://www.uniprot.org/uniprot/Q39203", "type": "external" } ], "mass": 88493.0, "length": 797, "protein_name": "G-type lectin S-receptor-like serine/threonine-protein kinase SD2-2", "gene_name": "RLK4; SD22", "organism": "Arabidopsis", "refseq_name": "receptor-like protein kinase 4", "refseq_ac": [ { "id": "NP_567172", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_567172", "type": "external" } ], "gene_names_uniprotkb": "RLK4; SD22; A_IG005I10.19; A_IG005I10_19; F5I10.19; RLK4; receptor-like protein kinase 4", "gene_names_refseq": "A_IG005I10.19; A_IG005I10_19; RLK4; receptor-like protein kinase 4", "protein_names_uniprotkb": "G-type lectin S-receptor-like serine/threonine-protein kinase SD2-2; 2.7.11.1; Receptor-like kinase 4; S-domain-2 (SD2) receptor kinase 2; SD2-2", "protein_names_refseq": "receptor-like protein kinase 4", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G00340)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "10617198;14506206;15308754;18552232;27862469;8220453", "class_list": "", "function": "Serine/threonine-protein kinase., [UniProtKB, UniProtKB]", "predicted_glycosites": 6, "predicted_n_glycosites": 6, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 6, "binding_glycan_count": 0, "secondary_ac_list": "F4JH44;O23068", "ec_number_list": [ { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.3.2.27", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.2.27", "type": "external" }, { "id": "2.7.10.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.-", "type": "external" }, { "id": "3.1.4.46", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.4.46", "type": "external" }, { "id": "2.7.11.25", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.25", "type": "external" }, { "id": "2.7.11.22", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.22", "type": "external" }, { "id": "2.7.10.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.1", "type": "external" }, { "id": "2.7.11.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.-", "type": "external" }, { "id": "2.7.11.24", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.24", "type": "external" }, { "id": "2.7.12.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.1", "type": "external" }, { "id": "2.7.11.23", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.23", "type": "external" }, { "id": "2.7.12.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.2", "type": "external" }, { "id": "2.7.-.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.-.-", "type": "external" }, { "id": "3.1.26.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.26.-", "type": "external" }, { "id": "3.1.3.16", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.16", "type": "external" }, { "id": "2.7.11.34", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.34", "type": "external" }, { "id": "4.6.1.2", "url": "https://www.rhea-db.org/rhea/?query=ec:4.6.1.2", "type": "external" } ], "go_molecular_function": "GO:0004672 protein kinase activity;GO:0004674 protein serine/threonine kinase activity;GO:0005516 calmodulin binding;GO:0005524 ATP binding;GO:0031625 ubiquitin protein ligase binding", "go_cellular_component": "GO:0005576 extracellular region;GO:0005886 plasma membrane;GO:0016020 membrane", "go_biological_process": "GO:0006468 protein phosphorylation;GO:0048544 recognition of pollen", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q39203-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000010001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "P84634-1", "uniprot_id": [ { "id": "DCL4_ARATH", "url": "https://www.uniprot.org/uniprot/P84634", "type": "external" } ], "mass": 191279.0, "length": 1702, "protein_name": "Dicer-like protein 4", "gene_name": "DCL4", "organism": "Arabidopsis", "refseq_name": "dicer-like 4", "refseq_ac": [ { "id": "NP_197532", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_197532", "type": "external" } ], "gene_names_uniprotkb": "DCL4; ATDCL4; DICER-LIKE 4; F5O24.210; F5O24_210; dicer-like 4", "gene_names_refseq": "ATDCL4; DCL4; DICER-LIKE 4; F5O24.210; F5O24_210; dicer-like 4", "protein_names_uniprotkb": "Dicer-like protein 4; 3.1.26.-", "protein_names_refseq": "dicer-like 4", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G20320)", "pathway_count": 1, "publication_count": 18, "publication_id_list": "11130714;15821876;16040244;16129836;16131612;16273107;16682354;16810317;17586651;17592042;18003861;18353962;18799732;20106953;22060019;24265739;27862469;30833711", "class_list": "", "function": "Ribonuclease (RNase) III involved in RNA-mediated post-transcriptional gene silencing (PTGS). Functions in the biogenesis of trans-acting small interfering RNAs (ta-siRNAs, derived from the TAS1, TAS2 or TAS3 endogenous transcripts) by cleaving small dsRNAs into 21-24 nucleotide ta-siRNAs. Functions with the dsRNA-binding protein DRB4 in ta-siRNAs processing. Acts in the RDR6/SGS3/DCL4/AGO7 ta-siRNA pathway involved in leaf developmental timing. Plays a role in transitive silencing of transgenes by processing secondary siRNAs. This pathway, which requires DCL2 and RDR6, amplifies silencing by using the target RNA as substrate to generate secondary siRNAs, providing an efficient mechanism for long-distance silencing. Required for the production of the 30-40 nucleotide bacterial-induced long siRNAs (lsiRNA). May participate with DCL3 in the production of 24 nucleotide repeat-associated siRNAs (ra-siRNAs) which derive from heterochromatin and DNA repeats such as transposons. Plays an important role in antiviral RNA silencing. Involved in the production of viral siRNAs derived from the cucumber mosaic virus (CMV), turnip crinkle virus (TCV) and tobacco rattle virus (TRV). Targeted by the viral silencing suppressor (VSR) protein 2b of the cucumber mosaic virus (CMV) that inactivates DCL4 function in RNA silencing. Does not seem to be involved in microRNAs (miRNAs) processing., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q3SA53", "ec_number_list": [], "go_molecular_function": "GO:0003723 RNA binding;GO:0005524 ATP binding;GO:0046872 metal ion binding;GO:0004386 helicase activity;GO:0004525 ribonuclease III activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005829 cytosol;GO:0036464 cytoplasmic ribonucleoprotein granule", "go_biological_process": "GO:0051607 defense response to virus;GO:0030422 siRNA processing;GO:0006353 DNA-templated transcription termination;GO:0044027 negative regulation of gene expression via chromosomal CpG island methylation;GO:0009616 RNAi-mediated antiviral immune response", "synthesized_glycan_count": 0, "hit_score": 1.9, "record_id": "P84634-1", "record_type": "protein", "filter_code": "0000000.0000101.010000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "O23624-1", "uniprot_id": [ { "id": "FPF1_ARATH", "url": "https://www.uniprot.org/uniprot/O23624", "type": "external" } ], "mass": 12722.0, "length": 110, "protein_name": "Flowering-promoting factor 1", "gene_name": "FPF1", "organism": "Arabidopsis", "refseq_name": "flowering promoting factor 1", "refseq_ac": [ { "id": "NP_197868", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_197868", "type": "external" } ], "gene_names_uniprotkb": "FPF1; ATFPF1; F6A4.70; F6A4_70; F6A4; FLOWERING PROMOTING FACTOR 1; T4C12", "gene_names_refseq": "ARABIDOPSIS FLOWERING PROMOTING FACTOR 1; ATFPF1; F6A4.70; F6A4_70; FLOWERING PROMOTING FACTOR 1; FPF1", "protein_names_uniprotkb": "Flowering-promoting factor 1; AtFPF1", "protein_names_refseq": "flowering promoting factor 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G24860)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "10406123;11130714;27862469;9286110", "class_list": "", "function": "Modulates the competence to flowering of apical meristems. Involved in a GA-dependent response in apical meristems during the transition to flowering., [UniProtKB, PubMed, PubMed, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005634 nucleus;GO:0005739 mitochondrion", "go_biological_process": "GO:0009911 positive regulation of flower development;GO:0010228 vegetative to reproductive phase transition of meristem;GO:0009909 regulation of flower development", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "O23624-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q0WQE7-1", "uniprot_id": [ { "id": "AUG3_ARATH", "url": "https://www.uniprot.org/uniprot/Q0WQE7", "type": "external" } ], "mass": 69725.0, "length": 617, "protein_name": "AUGMIN subunit 3", "gene_name": "AUG3", "organism": "Arabidopsis", "refseq_name": "HAUS augmin-like complex subunit", "refseq_ac": [ { "id": "NP_199663", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_199663", "type": "external" } ], "gene_names_uniprotkb": "AUG3; AtAUG3; MJE7.16; MJE7_16; augmin 3", "gene_names_refseq": "AUG3; AtAUG3; MJE7.16; MJE7_16; augmin 3", "protein_names_uniprotkb": "AUGMIN subunit 3", "protein_names_refseq": "HAUS augmin-like complex subunit", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G48520)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "10718197;11130714;21750235;22505726;23776212;27862469", "class_list": "", "function": "Involved in microtubules reorganization during spindle and phragmoplast development. Required for gamma-tubulin localization during mitosis., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 7, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9LV62", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005634 nucleus;GO:0005819 spindle;GO:0005874 microtubule;GO:0005815 microtubule organizing center;GO:0070652 HAUS complex", "go_biological_process": "GO:0051301 cell division;GO:0051225 spindle assembly;GO:0031023 microtubule organizing center organization;GO:0080175 phragmoplast microtubule organization", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q0WQE7-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "P82805-1", "uniprot_id": [ { "id": "TO204_ARATH", "url": "https://www.uniprot.org/uniprot/P82805", "type": "external" } ], "mass": 20973.0, "length": 187, "protein_name": "Mitochondrial import receptor subunit TOM20-4", "gene_name": "TOM20-4", "organism": "Arabidopsis", "refseq_name": "translocase of outer membrane 20-4", "refseq_ac": [ { "id": "NP_198909", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_198909", "type": "external" } ], "gene_names_uniprotkb": "TOM20-4; MMG1.2; MMG1_2", "gene_names_refseq": "MMG1.2; MMG1_2; TOM20-4; translocase of outer membrane 20-4", "protein_names_uniprotkb": "Mitochondrial import receptor subunit TOM20-4; Translocase of outer membrane 20 kDa subunit 4", "protein_names_refseq": "translocase of outer membrane 20-4", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G40930)", "pathway_count": 1, "publication_count": 18, "publication_id_list": "11130714;11161051;11910074;14593172;14730085;17981999;18463617;19376835;20215589;20466843;21057222;21768351;23328941;24043427;25561503;27419465;27862469;30833711", "class_list": "", "function": "Central component of the receptor complex responsible for the recognition and translocation of cytosolically synthesized mitochondrial preproteins. Together with TOM22 functions as the transit peptide receptor at the surface of the mitochondrion outer membrane and facilitates the movement of preproteins into the translocation pore., [UniProtKB, UniProtKB, UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 8, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q541X7", "ec_number_list": [], "go_molecular_function": "GO:0015450 protein-transporting ATPase activity", "go_cellular_component": "GO:0005739 mitochondrion;GO:0005744 TIM23 mitochondrial import inner membrane translocase complex;GO:0005742 mitochondrial outer membrane translocase complex;GO:0000325 plant-type vacuole;GO:0009536 plastid", "go_biological_process": "GO:0045040 protein insertion into mitochondrial outer membrane;GO:0006626 protein targeting to mitochondrion;GO:0015031 protein transport", "synthesized_glycan_count": 0, "hit_score": 1.9, "record_id": "P82805-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "P57751-1", "uniprot_id": [ { "id": "UGPA1_ARATH", "url": "https://www.uniprot.org/uniprot/P57751", "type": "external" } ], "mass": 51920.0, "length": 470, "protein_name": "UTP--glucose-1-phosphate uridylyltransferase 1", "gene_name": "UGP1; UGP2", "organism": "Arabidopsis", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "UGP1; UGP2; AtUGP2; MKP11.16; MKP11.26; MKP11_26", "gene_names_refseq": "", "protein_names_uniprotkb": "UTP--glucose-1-phosphate uridylyltransferase 1; 2.7.7.9; AtUGP1; UDP-glucose pyrophosphorylase 1; UDPGP 1; UGPase 1", "protein_names_refseq": "", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G17310)", "pathway_count": 1, "publication_count": 11, "publication_id_list": "11130714;14593172;19366709;20435647;20466843;23111157;23438466;25561503;27862469;30833711;9330910", "class_list": "", "function": "Converts glucose 1-phosphate to UDP-glucose, which is the major glycosyl donor for polysaccharides. Acts redundantly with UGP2 and is essential for the synthesis of sucrose, starch and cell wall, and callose deposition (PubMed:19366709, PubMed:20435647). Involved in the regulation of the programmed cell death (PCD) induced by the fungal toxin fumonisin B1 (FB1) (PubMed:23438466)., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 3, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q3E9G5", "ec_number_list": [ { "id": "2.7.7.9", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.7.9", "type": "external" }, { "id": "2.7.7.23", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.7.23", "type": "external" }, { "id": "2.7.7.83", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.7.83", "type": "external" } ], "go_molecular_function": "GO:0003983 UTP:glucose-1-phosphate uridylyltransferase activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005829 cytosol;GO:0005886 plasma membrane;GO:0009536 plastid", "go_biological_process": "GO:0005977 glycogen metabolic process;GO:0006011 UDP-alpha-D-glucose metabolic process;GO:0009555 pollen development;GO:0052543 callose deposition in cell wall", "synthesized_glycan_count": 0, "hit_score": 1.2, "record_id": "P57751-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q3KTM0-1", "uniprot_id": [ { "id": "FRO7_ARATH", "url": "https://www.uniprot.org/uniprot/Q3KTM0", "type": "external" } ], "mass": 84126.0, "length": 747, "protein_name": "Ferric reduction oxidase 7, chloroplastic", "gene_name": "FRO7", "organism": "Arabidopsis", "refseq_name": "ferric reduction oxidase 7", "refseq_ac": [ { "id": "NP_199785", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_199785", "type": "external" } ], "gene_names_uniprotkb": "FRO7; ATFRO7; FERRIC REDUCTION OXIDASE 7; K2I5.10; K2I5_10; ferric reduction oxidase 7", "gene_names_refseq": "ATFRO7; FERRIC REDUCTION OXIDASE 7; FRO7; K2I5.10; K2I5_10; ferric reduction oxidase 7", "protein_names_uniprotkb": "Ferric reduction oxidase 7, chloroplastic; 1.16.1.7; AtFRO7; Ferric-chelate reductase 7", "protein_names_refseq": "ferric reduction oxidase 7", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G49740)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "11130714;16006655;16362328;16489134;18647837;27862469", "class_list": "", "function": "Ferric chelate reductase involved in iron mobilization from the cytosol into the chloroplast. May participate in the transport of electrons to a Fe(3+) ion via FAD and heme intermediates. Might be involved iron homeostasis in trichomes., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9LT99", "ec_number_list": [ { "id": "1.16.1.7", "url": "https://www.rhea-db.org/rhea/?query=ec:1.16.1.7", "type": "external" } ], "go_molecular_function": "GO:0046872 metal ion binding;GO:0000293 ferric-chelate reductase activity;GO:0140618 ferric-chelate reductase (NADH) activity;GO:0016491 oxidoreductase activity", "go_cellular_component": "GO:0005886 plasma membrane;GO:0009507 chloroplast;GO:0009536 plastid;GO:0031969 chloroplast membrane;GO:0016020 membrane", "go_biological_process": "GO:0033212 iron import into cell;GO:0009767 photosynthetic electron transport chain;GO:0006811 monoatomic ion transport", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q3KTM0-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q0WUG6-1", "uniprot_id": [ { "id": "SBT61_ARATH", "url": "https://www.uniprot.org/uniprot/Q0WUG6", "type": "external" } ], "mass": 116151.0, "length": 1038, "protein_name": "Subtilisin-like protease SBT6.1", "gene_name": "S1P; SBT6.1", "organism": "Arabidopsis", "refseq_name": "SITE-1 protease", "refseq_ac": [ { "id": "NP_197467", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_197467", "type": "external" } ], "gene_names_uniprotkb": "S1P; SBT6.1; ATS1P; ATSBT6.1; S1P; SITE-1 PROTEASE; SITE-1 protease; T29J13.80; T29J13_80", "gene_names_refseq": "ATS1P; ATSBT6.1; S1P; SITE-1 PROTEASE; SITE-1 protease; T29J13.80; T29J13_80", "protein_names_uniprotkb": "Subtilisin-like protease SBT6.1; 3.4.21.-; AtS1P; AtSBT6.1; Site-1 protease; Subtilase subfamily 6 member 1", "protein_names_refseq": "SITE-1 protease", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G19660)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "11130714;14593172;16193095;17662035;19144003;19473327;20876872;27862469", "class_list": "", "function": "Serine protease that catalyzes the first step (site-1 cleavage) in the proteolytic activation of various factors, prior to site-2 cleavage. Part of a regulated intramembrane proteolysis (RIP) cascade. Cleaves BZIP17 and BZIP28 after the Arg-Arg-Ile-Leu (RRIL) motif. May cleave BZIP49 after the RRIL motif. Targets the membrane-associated BZIP17 factor, which functions as a stress sensor and transducer in a signaling pathway that resembles an ER stress response. Following salt stress, BZIP17 is cleaved by SBT6.1 (S1P) and S2P at the C-terminus and the N-terminal bZIP component is translocated to the nucleus, where it activates the expression of salt stress response genes (PubMed:17662035). Cleaves the pectinesterases PME1 after the Arg-Arg-Leu-Met (RRLM) and Arg-Arg-Leu-Leu (RRLL) motifs, and PME5 after the Arg-Arg-Leu-Leu (RRLL) and Arg-Lys-Leu-Met (RKLM) motifs. This processing and C-terminus release occurs in the Golgi apparatus and is required for cell wall targeting of pectinesterases. Thus, SBT6.1 mediates the regulated release of mature pectinesterases from the Golgi (PubMed:19144003). Cleaves the peptide growth factor RALF23 after the Arg-Arg-Ile-Leu (RRIL) motif. This processing is required for RALF23 function in the negative regulation of brassinolide (BL)-mediated signaling pathway (e.g. BL-induced hypocotyl elongation and branching limitation) (PubMed:19473327)., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 11, "predicted_n_glycosites": 10, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 11, "binding_glycan_count": 0, "secondary_ac_list": "Q8L7B7", "ec_number_list": [], "go_molecular_function": "GO:0004175 endopeptidase activity;GO:0004252 serine-type endopeptidase activity", "go_cellular_component": "GO:0000139 Golgi membrane;GO:0005576 extracellular region;GO:0005794 Golgi apparatus", "go_biological_process": "GO:0006508 proteolysis;GO:0042538 hyperosmotic salinity response;GO:0006972 hyperosmotic response", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "Q0WUG6-1", "record_type": "protein", "filter_code": "0000000.0000101.010000.100000000000000000.0000000011000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q38920-1", "uniprot_id": [ { "id": "FNTB_ARATH", "url": "https://www.uniprot.org/uniprot/Q38920", "type": "external" } ], "mass": 54216.0, "length": 482, "protein_name": "Protein farnesyltransferase subunit beta", "gene_name": "ERA1; FTB", "organism": "Arabidopsis", "refseq_name": "Prenyltransferase family protein", "refseq_ac": [ { "id": "NP_198844", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_198844", "type": "external" } ], "gene_names_uniprotkb": "ERA1; FTB; ATFTB; ENHANCED RESPONSE TO ABA 1; ERA1; MSN9.180; MSN9.20; MSN9_180; WIGGUM; WIG", "gene_names_refseq": "ARABIDOPSIS THALIANA FARNESYL TRANSFERASE BETA SUBUNIT; ATFTB; ENHANCED RESPONSE TO ABA 1; ERA1; FARNESYL TRANSFERASE BETA SUBUNIT; MSN9.180; MSN9_180; WIGGUM; WIG", "protein_names_uniprotkb": "Protein farnesyltransferase subunit beta; 2.5.1.58; CAAX farnesyltransferase subunit beta; Enhanced response to abscisic acid 1; FTase-beta; Ras proteins prenyltransferase subunit beta", "protein_names_refseq": "Prenyltransferase family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G40280)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "10840062;11130714;14593172;20565889;26147561;27862469;9679202", "class_list": "", "function": "Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins having the C-terminal sequence Cys-aliphatic-aliphatic-X (CaaX) (PubMed:20565889). The beta subunit is responsible for peptide-binding (PubMed:20565889). Acts as an abscisic acid (ABA) negative regulator by mediating ASG2 farnesylation and consequently monitoring its subcellular localization (PubMed:26147561). Involved in responses to salt (NaCl) and osmotic (e.g. in response to mannitol and PEG) stresses (PubMed:26147561)., [UniProtKB, PubMed, PubMed, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A4VCL6;Q38916;Q8LPK8;Q9LLE9", "ec_number_list": [ { "id": "2.5.1.58", "url": "https://www.rhea-db.org/rhea/?query=ec:2.5.1.58", "type": "external" }, { "id": "2.5.1.59", "url": "https://www.rhea-db.org/rhea/?query=ec:2.5.1.59", "type": "external" } ], "go_molecular_function": "GO:0004660 protein farnesyltransferase activity;GO:0008270 zinc ion binding;GO:0004311 geranylgeranyl diphosphate synthase activity", "go_cellular_component": "GO:0005965 protein farnesyltransferase complex", "go_biological_process": "GO:0018343 protein farnesylation;GO:0009414 response to water deprivation;GO:0009620 response to fungus;GO:0018342 protein prenylation;GO:0047484 regulation of response to osmotic stress", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q38920-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "P58766-1", "uniprot_id": [ { "id": "PLDA3_ARATH", "url": "https://www.uniprot.org/uniprot/P58766", "type": "external" } ], "mass": 93362.0, "length": 820, "protein_name": "Phospholipase D alpha 3", "gene_name": "PLDALPHA3", "organism": "Arabidopsis", "refseq_name": "phospholipase D alpha 3", "refseq_ac": [ { "id": "NP_001318645", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001318645", "type": "external" } ], "gene_names_uniprotkb": "PLDALPHA3; F18G18.110; F18G18_110; phospholipase D alpha 3", "gene_names_refseq": "F18G18.110; F18G18_110; PLDALPHA3; phospholipase D alpha 3", "protein_names_uniprotkb": "Phospholipase D alpha 3; 3.1.4.4; AtPLDalpha3; PLD alpha 3", "protein_names_refseq": "phospholipase D alpha 3", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G25370)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "11130714;11891260;18364466;19704505;25081480;27862469", "class_list": "", "function": "Hydrolyzes glycerol-phospholipids at the terminal phosphodiesteric bond to generate phosphatidic acids (PA) (PubMed:18364466). Active with phosphatidylcholine (PC), phosphatidylethanolamine (PE), phosphatidylglycerol (PG), and phosphatidylserine (PS) as substrates (PubMed:18364466). No activity toward phosphatidylinositol (PI) or PIP2 (PubMed:18364466). Positively mediates plant responses to hyperosmotic stresses and promotes root growth, flowering, and stress avoidance (PubMed:18364466, PubMed:19704505). Not involved in the abscisic acid regulation of stomatal movement and transpirational water loss (PubMed:18364466)., [UniProtKB, PubMed, PubMed]; Hydrolyzes glycerol-phospholipids at the terminal phosphodiesteric bond., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [ { "id": "3.1.4.4", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.4.4", "type": "external" } ], "go_molecular_function": "GO:0004630 phospholipase D activity;GO:0005509 calcium ion binding", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005886 plasma membrane;GO:0016020 membrane", "go_biological_process": "GO:0009395 phospholipid catabolic process;GO:0046470 phosphatidylcholine metabolic process;GO:0009651 response to salt stress;GO:0009414 response to water deprivation;GO:0046466 membrane lipid catabolic process", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "P58766-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q00917-1", "uniprot_id": [ { "id": "SUS2_ARATH", "url": "https://www.uniprot.org/uniprot/Q00917", "type": "external" } ], "mass": 92064.0, "length": 807, "protein_name": "Sucrose synthase 2", "gene_name": "SUS2", "organism": "Arabidopsis", "refseq_name": "sucrose synthase 2", "refseq_ac": [ { "id": "NP_199730", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_199730", "type": "external" } ], "gene_names_uniprotkb": "SUS2; ATSUS2; K21P3.6; K21P3_6; SSA; SUCROSE SYNTHASE; sucrose synthase 2", "gene_names_refseq": "ATSUS2; K21P3.6; K21P3_6; SSA; SUCROSE SYNTHASE FROM ARABIDOPSIS; SUCROSE SYNTHASE; SUS2; sucrose synthase 2", "protein_names_uniprotkb": "Sucrose synthase 2; 2.4.1.13; AtSUS2; Sucrose-UDP glucosyltransferase 2", "protein_names_refseq": "sucrose synthase 2", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G49190)", "pathway_count": 1, "publication_count": 14, "publication_id_list": "10048488;10567234;11130714;14739263;1531031;17257168;18635527;18701523;19207209;20559653;22228409;23328941;27862469;28011693", "class_list": "glycogene;glycosyltransferase", "function": "Sucrose-cleaving enzyme that provides UDP-glucose and fructose for various metabolic pathways., [UniProtKB, UniProtKB, UniProtKB]; Sucrose-cleaving enzyme that provides UDP-glucose and fructose for various metabolic pathways. Modulates metabolic homeostasis and directs carbon towards starch synthesis in developing seeds., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "F4K4S0;Q9FJ20", "ec_number_list": [ { "id": "2.4.1.13", "url": "https://www.rhea-db.org/rhea/?query=ec:2.4.1.13", "type": "external" } ], "go_molecular_function": "GO:0016157 sucrose synthase activity", "go_cellular_component": "GO:0005829 cytosol;GO:0009505 plant-type cell wall;GO:0009507 chloroplast;GO:0042170 plastid membrane", "go_biological_process": "GO:0001666 response to hypoxia;GO:0005985 sucrose metabolic process;GO:0005982 starch metabolic process;GO:0010431 seed maturation", "synthesized_glycan_count": 0, "hit_score": 1.5, "record_id": "Q00917-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.11000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q39043-1", "uniprot_id": [ { "id": "BIP2_ARATH", "url": "https://www.uniprot.org/uniprot/Q39043", "type": "external" } ], "mass": 73561.0, "length": 668, "protein_name": "Heat shock 70 kDa protein BIP2", "gene_name": "BIP2", "organism": "Arabidopsis", "refseq_name": "Heat shock protein 70 (Hsp 70) family protein", "refseq_ac": [ { "id": "NP_851119", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_851119", "type": "external" } ], "gene_names_uniprotkb": "BIP2; BIP; HSP70-12; MED37F; MED37_6; MJC20.12; MJC20_12; luminal binding protein", "gene_names_refseq": "BIP2; BIP; MJC20.12; MJC20_12; luminal binding protein", "protein_names_uniprotkb": "Heat shock 70 kDa protein BIP2; AtBP2; AtHsp70-12; BiP2; Heat shock 70 kDa protein 12; Heat shock protein 70-12; Luminal-binding protein 2", "protein_names_refseq": "Heat shock protein 70 (Hsp 70) family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G42020)", "pathway_count": 1, "publication_count": 23, "publication_id_list": "10470850;11130714;11402207;11599561;14593172;16781668;17272265;17560376;18494858;20080634;20231441;20466843;22021418;23111157;23328941;23776212;24486762;25561503;26251880;27862469;28011693;31410484;8888624", "class_list": "", "function": "In cooperation with other chaperones, Hsp70s are key components that facilitate folding of de novo synthesized proteins, assist translocation of precursor proteins into organelles, and are responsible for degradation of damaged protein under stress conditions (Probable). Involved in polar nuclei fusion during female gametophyte development and is essential for the regulation of endosperm nuclei proliferation (PubMed:20080634). Involved in sperm nuclear fusion with central cell polar nuclei at fertilization, which is critical for normal endosperm nuclear proliferation (PubMed:31410484). Required for pollen development and pollen tube growth (PubMed:24486762)., [UniProtKB, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 4, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q39042", "ec_number_list": [], "go_molecular_function": "GO:0005524 ATP binding;GO:0016887 ATP hydrolysis activity;GO:0031072 heat shock protein binding;GO:0044183 protein folding chaperone", "go_cellular_component": "GO:0034663 endoplasmic reticulum chaperone complex;GO:0099503 secretory vesicle;GO:0005634 nucleus;GO:0005730 nucleolus;GO:0005737 cytoplasm", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006457 protein folding;GO:0030968 endoplasmic reticulum unfolded protein response;GO:0036503 ERAD pathway;GO:0009408 response to heat", "synthesized_glycan_count": 0, "hit_score": 2.4, "record_id": "Q39043-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q0WML0-1", "uniprot_id": [ { "id": "AB27B_ARATH", "url": "https://www.uniprot.org/uniprot/Q0WML0", "type": "external" } ], "mass": 69104.0, "length": 644, "protein_name": "ABC transporter B family member 27", "gene_name": "ABCB27", "organism": "Arabidopsis", "refseq_name": "transporter associated with antigen processing protein 2", "refseq_ac": [ { "id": "NP_198720", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_198720", "type": "external" } ], "gene_names_uniprotkb": "ABCB27; ALS1; ALUMINUM SENSITIVE 1; ATP-binding cassette B27; ATTAP2; AtALS1; MXF12.50; MXF12_50; TAP2", "gene_names_refseq": "ABCB27; ALS1; ALUMINUM SENSITIVE 1; ARABIDOPSIS THALIANA TRANSPORTER ASSOCIATED WITH ANTIGEN PROCESSING PROTEIN 2; ATP-binding cassette B27; ATTAP2; AtALS1; MXF12.50; MXF12_50; TAP2; transporter associated with antigen processing protein 2", "protein_names_uniprotkb": "ABC transporter B family member 27; ABC transporter ABCB.27; Aluminum tolerance-related ATP-binding cassette transporter; Antigen peptide transporter-like 2; AtABCB27; AtTAP2; Transporter associated with antigen processing-like protein 2", "protein_names_refseq": "transporter associated with antigen processing protein 2", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G39040)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "10048488;11130714;11346655;17151019;17171374;18299247;25561503;27862469", "class_list": "", "function": "Probably involved in redistribution of internalized aluminum. May mediate vacuolar sequestration of a metal complex., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q8RY45;Q9FID4", "ec_number_list": [], "go_molecular_function": "GO:0005524 ATP binding;GO:0042626 ATPase-coupled transmembrane transporter activity;GO:0016887 ATP hydrolysis activity;GO:0140359 ABC-type transporter activity", "go_cellular_component": "GO:0016020 membrane;GO:0005774 vacuolar membrane;GO:0005773 vacuole;GO:0000325 plant-type vacuole;GO:0009536 plastid", "go_biological_process": "GO:0055085 transmembrane transport;GO:0010044 response to aluminum ion", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "Q0WML0-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q39111-1", "uniprot_id": [ { "id": "GAOX2_ARATH", "url": "https://www.uniprot.org/uniprot/Q39111", "type": "external" } ], "mass": 42937.0, "length": 378, "protein_name": "Gibberellin 20 oxidase 2", "gene_name": "GA20OX2", "organism": "Arabidopsis", "refseq_name": "gibberellin 20 oxidase 2", "refseq_ac": [ { "id": "NP_199994", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_199994", "type": "external" } ], "gene_names_uniprotkb": "GA20OX2; 20ox; AT2353; ATGA20OX2; At2353; MIO24.5; MIO24_5; gibberellin 20 oxidase 2", "gene_names_refseq": "AT2353; ATGA20OX2; GA20OX2; MIO24.5; MIO24_5; gibberellin 20 oxidase 2", "protein_names_uniprotkb": "Gibberellin 20 oxidase 2; 1.14.11.-; GA 20-oxidase 2; Gibberellin C-20 oxidase 2", "protein_names_refseq": "gibberellin 20 oxidase 2", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G51810)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "11130714;14729916;15923331;15927942;16905669;18069939;21056641;27862469;7630935;9628582", "class_list": "", "function": "Key oxidase enzyme in the biosynthesis of gibberellin that catalyzes the conversion of GA12 to GA9, via a three-step oxidation at C-20 of the GA skeleton, and GA25 is also formed as a minor product. GA53 is less effectively oxidized than GA12 and is only oxidized one step to GA44 (PubMed:7630935). Involved in the promotion of the floral transition, fertility and silique elongation, but plays only a minor role in elongation of seedling organs. Acts redundantly with GA20OX1 (PubMed:18069939)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [ { "id": "1.14.11.-", "url": "https://www.rhea-db.org/rhea/?query=ec:1.14.11.-", "type": "external" } ], "go_molecular_function": "GO:0046872 metal ion binding;GO:0045544 gibberellin 20-oxidase activity", "go_cellular_component": "GO:0005737 cytoplasm", "go_biological_process": "GO:0009416 response to light stimulus;GO:0009639 response to red or far red light;GO:0009686 gibberellin biosynthetic process;GO:0009739 response to gibberellin", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "Q39111-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "P94102-1", "uniprot_id": [ { "id": "RAD51_ARATH", "url": "https://www.uniprot.org/uniprot/P94102", "type": "external" } ], "mass": 37304.0, "length": 342, "protein_name": "DNA repair protein RAD51 homolog 1", "gene_name": "RAD51", "organism": "Arabidopsis", "refseq_name": "RAS associated with diabetes protein 51", "refseq_ac": [ { "id": "NP_568402", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_568402", "type": "external" } ], "gene_names_uniprotkb": "RAD51; ATRAD51; F22D1.20; F22D1_20", "gene_names_refseq": "ATRAD51; F22D1.20; F22D1_20; RAD51; RAS associated with diabetes protein 51", "protein_names_uniprotkb": "DNA repair protein RAD51 homolog 1; AtRAD51; Rad51-like protein 1", "protein_names_refseq": "RAS associated with diabetes protein 51", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G20850)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "10894550;11130714;12139010;12509526;15249667;16415210;17227544;27862469;8980505;9520262", "class_list": "", "function": "Binds to single and double-stranded DNA and exhibits DNA-dependent ATPase activity. Unwinds duplex DNA (By similarity). Component of the meiotic recombination pathway. Seems to play a role in mediating chromosome homology search, chromosome pairing and synapsis at early stages and probably chromosome crossing-over at later stages in meiosis. Probably is involved in the repair of meiotic double strand breaks (DBSs) generated by AtSPO11-1 and in homologous recombination. Its function is dispensable for vegetative growth and root mitosis., [UniProtKB, UniProtKB, PubMed, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0005524 ATP binding;GO:0003690 double-stranded DNA binding;GO:0003697 single-stranded DNA binding;GO:0008094 ATP-dependent activity, acting on DNA;GO:0000150 DNA strand exchange activity", "go_cellular_component": "GO:0000794 condensed nuclear chromosome;GO:0005634 nucleus;GO:0005694 chromosome", "go_biological_process": "GO:0006312 mitotic recombination;GO:0010332 response to gamma radiation;GO:0006355 regulation of DNA-templated transcription;GO:0006259 DNA metabolic process;GO:0006302 double-strand break repair", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "P94102-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q39054-1", "uniprot_id": [ { "id": "CNX1_ARATH", "url": "https://www.uniprot.org/uniprot/Q39054", "type": "external" } ], "mass": 71279.0, "length": 670, "protein_name": "Molybdopterin biosynthesis protein CNX1", "gene_name": "B73; CNX1", "organism": "Arabidopsis", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "B73; CNX1; CHL6; CHLORATE RESISTANT 6; CNX1; CNX; F22D1.6; SIR4; SIRTINOL 4; T10F18.20; T10F18_20", "gene_names_refseq": "", "protein_names_uniprotkb": "Molybdopterin biosynthesis protein CNX1; Domain E; Domain G; Molybdenum cofactor biosynthesis enzyme CNX1", "protein_names_refseq": "", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G20990)", "pathway_count": 1, "publication_count": 11, "publication_id_list": "10823911;11130714;11554796;12590921;15306815;15504727;16636046;25561503;27862469;8528286;9341109", "class_list": "", "function": "Catalyzes two steps in the biosynthesis of the molybdenum cofactor. In the first step, molybdopterin is adenylated. Subsequently, molybdate is inserted into adenylated molybdopterin and AMP is released., [UniProtKB, PubMed, PubMed, PubMed, PubMed, UniProtKB, UniProtKB]", "predicted_glycosites": 3, "predicted_n_glycosites": 0, "predicted_o_glycosites": 3, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 14, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 3, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [ { "id": "2.10.1.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.10.1.1", "type": "external" }, { "id": "2.7.7.75", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.7.75", "type": "external" } ], "go_molecular_function": "GO:0030151 molybdenum ion binding;GO:0008940 nitrate reductase activity;GO:0061598 molybdopterin adenylyltransferase activity;GO:0061599 molybdopterin molybdotransferase activity;GO:0005524 ATP binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005829 cytosol", "go_biological_process": "GO:0010038 response to metal ion;GO:0006777 Mo-molybdopterin cofactor biosynthetic process;GO:0009734 auxin-activated signaling pathway", "synthesized_glycan_count": 0, "hit_score": 1.2, "record_id": "Q39054-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000001001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "P93655-1", "uniprot_id": [ { "id": "LONM1_ARATH", "url": "https://www.uniprot.org/uniprot/P93655", "type": "external" } ], "mass": 103930.0, "length": 940, "protein_name": "Lon protease homolog 1, mitochondrial", "gene_name": "LON1", "organism": "Arabidopsis", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "LON1; F2P16.23; F2P16_23; LON_ARA_ARA; lon protease 1", "gene_names_refseq": "", "protein_names_uniprotkb": "Lon protease homolog 1, mitochondrial; 3.4.21.53", "protein_names_refseq": "", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G26860)", "pathway_count": 1, "publication_count": 12, "publication_id_list": "11130714;14593172;14671022;17478548;18433157;18463617;19076295;19376835;19688752;20466843;22631563;27862469", "class_list": "", "function": "ATP-dependent serine protease that mediates the selective degradation of misfolded, unassembled or oxidatively damaged polypeptides as well as certain short-lived regulatory proteins in the mitochondrial matrix. May also have a chaperone function in the assembly of inner membrane protein complexes. Participates in the regulation of mitochondrial gene expression and in the maintenance of the integrity of the mitochondrial genome. Binds to mitochondrial DNA in a site-specific manner., [UniProtKB, PubMed, HAMAP, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 4, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O04954;Q8RWX1", "ec_number_list": [], "go_molecular_function": "GO:0004252 serine-type endopeptidase activity;GO:0005524 ATP binding;GO:0016887 ATP hydrolysis activity;GO:0043565 sequence-specific DNA binding;GO:0003697 single-stranded DNA binding", "go_cellular_component": "GO:0005739 mitochondrion;GO:0005759 mitochondrial matrix", "go_biological_process": "GO:0034599 cellular response to oxidative stress;GO:0007005 mitochondrion organization;GO:0006515 protein quality control for misfolded or incompletely synthesized proteins;GO:0051131 chaperone-mediated protein complex assembly;GO:0070407 oxidation-dependent protein catabolic process", "synthesized_glycan_count": 0, "hit_score": 1.3, "record_id": "P93655-1", "record_type": "protein", "filter_code": "0000000.0000101.010000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q0WL81-1", "uniprot_id": [ { "id": "RNL_ARATH", "url": "https://www.uniprot.org/uniprot/Q0WL81", "type": "external" } ], "mass": 123205.0, "length": 1104, "protein_name": "tRNA ligase 1", "gene_name": "RNL", "organism": "Arabidopsis", "refseq_name": "RNAligase", "refseq_ac": [ { "id": "NP_172269", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_172269", "type": "external" } ], "gene_names_uniprotkb": "RNL; ATRNL; AtRLG1; RLG1; RNAligase; T6D22.1; T6D22_1; TRNA LIGASE", "gene_names_refseq": "ARABIDOPSIS THALIANA RNA LIGASE; ATRNL; AtRLG1; RNAligase; RNL; T6D22.1; T6D22_1; TRNA LIGASE", "protein_names_uniprotkb": "tRNA ligase 1; 6.5.1.3; AtRLG1; AtRNL; AtRlg1p; Protein AT.I.24-9", "protein_names_refseq": "RNAligase", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G07910)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "11130712;15653639;16428247;20844078;23515942;24554441;25892242;27862469", "class_list": "", "function": "Essential component of stress-response pathways entailing repair of RNA breaks with 2',3'-cyclic phosphate and 5'-OH ends (PubMed:23515942). Tri-functional enzyme that repairs RNA breaks with 2',3'-cyclic-PO(4) and 5'-OH ends. The ligation activity requires three sequential enzymatic activities: opening of the 2'3'-cyclic phosphodiester bond of the 5' half-tRNA leaving a 2'-phosphomonoester (CPDase activity), phosphorylation of the 5' terminus of the 3' half-tRNA in the presence of ATP (kinase activity) and ligation of the two tRNA halves in an ATP-dependent reaction (ligase activity) (PubMed:23515942, PubMed:24554441). Deficient in transferring AMP to pRNA(OH) to form AppRNA(OH) but proficient at sealing pre-adenylylated AppRNA(OH) (PubMed:23515942). CPDase and kinase reactions are almost insensitive to RNA length, whereas the ligase activity decreases with shorter RNA size. Can also splice DNA ended by a single 3'-terminal ribonucleoside 2',3'-cyclic-PO(4) (PubMed:24554441). Binds to mRNA, mature and immature (PubMed:20844078). Exhibits tRNA ligase activity in vitro (PubMed:15653639, PubMed:24554441). Required for the splicing of precursor tRNA molecules containing introns (PubMed:16428247, PubMed:20844078). Can circularize an intron cleaved from a pre-tRNA by splicing endonuclease in vitro (PubMed:20844078). Seems not involved in unfolded protein response (UPR) in the endoplasmic reticulum (PubMed:20844078). Involved in auxin signaling and polar transport during organ morphogenesis (PubMed:25892242)., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 5, "reported_mutagensis": 13, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q0WVN4;Q0WWW5;Q96312;Q9LN14", "ec_number_list": [], "go_molecular_function": "GO:0003729 mRNA binding;GO:0005524 ATP binding;GO:0016787 hydrolase activity;GO:0046872 metal ion binding;GO:0004519 endonuclease activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0009507 chloroplast", "go_biological_process": "GO:0006412 translation;GO:0006388 tRNA splicing, via endonucleolytic cleavage and ligation;GO:0042245 RNA repair;GO:0009734 auxin-activated signaling pathway;GO:0010928 regulation of auxin mediated signaling pathway", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "Q0WL81-1", "record_type": "protein", "filter_code": "0000000.0100101.010000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q0WV13-1", "uniprot_id": [ { "id": "GAUTD_ARATH", "url": "https://www.uniprot.org/uniprot/Q0WV13", "type": "external" } ], "mass": 61144.0, "length": 533, "protein_name": "Probable galacturonosyltransferase 13", "gene_name": "GAUT13", "organism": "Arabidopsis", "refseq_name": "galacturonosyltransferase 13", "refseq_ac": [ { "id": "NP_001118545", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001118545", "type": "external" } ], "gene_names_uniprotkb": "GAUT13; T4P13.28; T4P13_28; galacturonosyltransferase 13", "gene_names_refseq": "GAUT13; T4P13.28; T4P13_28; galacturonosyltransferase 13", "protein_names_uniprotkb": "Probable galacturonosyltransferase 13; 2.4.1.-", "protein_names_refseq": "galacturonosyltransferase 13", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G01040)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "11130713;16540543;19253305;19825675;23709340;25591940;27862469", "class_list": "glycogene;glycosyltransferase", "function": "May be involved in pectin and/or xylans biosynthesis in cell walls (By similarity). Together with GAUT14, required for pollen tube growth, possibly through the regulation of pectin biosynthesis and repartition in the pollen tube wall (PubMed:23709340)., [UniProtKB, UniProtKB, PubMed]", "predicted_glycosites": 4, "predicted_n_glycosites": 4, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 4, "binding_glycan_count": 0, "secondary_ac_list": "B3H768;Q9MAB8", "ec_number_list": [], "go_molecular_function": "GO:0047262 polygalacturonate 4-alpha-galacturonosyltransferase activity", "go_cellular_component": "GO:0000139 Golgi membrane;GO:0005794 Golgi apparatus;GO:0009507 chloroplast;GO:0090406 pollen tube", "go_biological_process": "GO:0009555 pollen development;GO:0009860 pollen tube growth;GO:0052325 cell wall pectin biosynthetic process;GO:0071555 cell wall organization;GO:0045489 pectin biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q0WV13-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000010001.001.11000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q39237-1", "uniprot_id": [ { "id": "TGA1_ARATH", "url": "https://www.uniprot.org/uniprot/Q39237", "type": "external" } ], "mass": 42064.0, "length": 368, "protein_name": "Transcription factor TGA1", "gene_name": "TGA1", "organism": "Arabidopsis", "refseq_name": "bZIP transcription factor family protein", "refseq_ac": [ { "id": "NP_001032147", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001032147", "type": "external" } ], "gene_names_uniprotkb": "TGA1; BZIP47; MQN23.15; MQN23_15", "gene_names_refseq": "MQN23.15; MQN23_15; TGA1; TGACG sequence-specific binding protein 1", "protein_names_uniprotkb": "Transcription factor TGA1; AtbZIP47; DNA-binding protein TGA1a-like protein; bZIP transcription factor 47", "protein_names_refseq": "bZIP transcription factor family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G65210)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "11130714;11906833;12953119;1446171;14593172;27862469;7479010;8628224;9734815", "class_list": "", "function": "Transcriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. May be involved in the induction of the systemic acquired resistance (SAR) via its interaction with NPR1. Could also bind to the Hex-motif (5'-TGACGTGG-3') another cis-acting element found in plant histone promoters., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 2, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q8LBQ9;Q9FJP4", "ec_number_list": [], "go_molecular_function": "GO:0003677 DNA binding;GO:0003700 DNA-binding transcription factor activity;GO:0000976 transcription cis-regulatory region binding;GO:0043565 sequence-specific DNA binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0042742 defense response to bacterium", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "Q39237-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "P46690-1", "uniprot_id": [ { "id": "GASA4_ARATH", "url": "https://www.uniprot.org/uniprot/P46690", "type": "external" } ], "mass": 11996.0, "length": 106, "protein_name": "Gibberellin-regulated protein 4", "gene_name": "GASA4", "organism": "Arabidopsis", "refseq_name": "GAST1 protein homolog 4", "refseq_ac": [ { "id": "NP_197027", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_197027", "type": "external" } ], "gene_names_uniprotkb": "GASA4; F8M21.120; F8M21_120; GAST1 protein homolog 4", "gene_names_refseq": "F8M21.120; F8M21_120; GASA4; GAST1 protein homolog 4", "protein_names_uniprotkb": "Gibberellin-regulated protein 4; GAST1 protein homolog 4", "protein_names_refseq": "GAST1 protein homolog 4", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G15230)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "11130714;14593172;17284469;21143681;27862469;7727751;9520278", "class_list": "", "function": "Gibberellin-regulated protein involved in the regulation of floral meristem and floral organ identity, and promotion of seed size and weight. May play a role in the promotion of gibberellin responses such as regulation of flowering under short-day conditions, seed germination and inhibition of gibberellin oxidase. Possesses redox activity in E.coli and may function in redox regulation in planta., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 4, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O49593", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005576 extracellular region", "go_biological_process": "GO:0045454 cell redox homeostasis;GO:0009740 gibberellic acid mediated signaling pathway;GO:0009739 response to gibberellin", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "P46690-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q39250-1", "uniprot_id": [ { "id": "ADF1_ARATH", "url": "https://www.uniprot.org/uniprot/Q39250", "type": "external" } ], "mass": 16113.0, "length": 139, "protein_name": "Actin-depolymerizing factor 1", "gene_name": "ADF1", "organism": "Arabidopsis", "refseq_name": "actin depolymerizing factor 1", "refseq_ac": [ { "id": "NP_190187", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_190187", "type": "external" } ], "gene_names_uniprotkb": "ADF1; ATADF1; F16L2_220; actin depolymerizing factor 1; atadf", "gene_names_refseq": "ADF1; ATADF1; actin depolymerizing factor 1; atadf", "protein_names_uniprotkb": "Actin-depolymerizing factor 1; ADF-1; AtADF1", "protein_names_refseq": "actin depolymerizing factor 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G46010)", "pathway_count": 1, "publication_count": 13, "publication_id_list": "11025548;11130713;11402164;11414611;14593172;16360805;17538023;21570971;23190411;23903947;26345162;27414648;27862469", "class_list": "", "function": "Actin-depolymerizing protein. Stimulates F-actin depolymerization. Involved in plant development, cell organ expansion and flowering by controlling breakdown of thick actin cables (PubMed:11402164). Severs actin filaments or bundles and promotes actin cytoskeleton disassembly (PubMed:21570971). Binds monomeric actin (G-actin) with a marked preference for the ADP-loaded form and inhibits the rate of nucleotide exchange on G-actin (PubMed:17538023)., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 7, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0003779 actin binding;GO:0051015 actin filament binding", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005829 cytosol;GO:0015629 actin cytoskeleton;GO:0009507 chloroplast", "go_biological_process": "GO:0007015 actin filament organization;GO:0030042 actin filament depolymerization", "synthesized_glycan_count": 0, "hit_score": 1.4, "record_id": "Q39250-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A8MRK9-1", "uniprot_id": [ { "id": "A8MRK9_ARATH", "url": "https://www.uniprot.org/uniprot/A8MRK9", "type": "external" } ], "mass": 16448.0, "length": 139, "protein_name": "RNApolymerase 14 kDa subunit", "gene_name": "RPC14", "organism": "Arabidopsis", "refseq_name": "RNApolymerase 14 kDa subunit", "refseq_ac": [ { "id": "NP_001077977", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001077977", "type": "external" } ], "gene_names_uniprotkb": "RPC14; ATRPAC14; ATRPC14; F16P2.8; F16P2_8; RNA POLYMERASE 14 KDA SUBUNIT; RNApolymerase 14 kDa subunit", "gene_names_refseq": "ATRPAC14; ATRPC14; F16P2.8; F16P2_8; RNA POLYMERASE 14 KDA SUBUNIT; RNApolymerase 14 kDa subunit; RPC14", "protein_names_uniprotkb": "RNApolymerase 14 kDa subunit", "protein_names_refseq": "RNApolymerase 14 kDa subunit", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G29540)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "10617197;27862469", "class_list": "", "function": "", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0046983 protein dimerization activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005736 RNA polymerase I complex;GO:0005666 RNA polymerase III complex", "go_biological_process": "GO:0006362 transcription elongation by RNA polymerase I;GO:0006383 transcription by RNA polymerase III", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "A8MRK9-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "P59169-1", "uniprot_id": [ { "id": "H33_ARATH", "url": "https://www.uniprot.org/uniprot/P59169", "type": "external" } ], "mass": 15406.0, "length": 136, "protein_name": "Histone H3.3", "gene_name": "H33; HTR4; HTR5; HTR8", "organism": "Arabidopsis", "refseq_name": "Histone superfamily protein", "refseq_ac": [ { "id": "NP_001031816", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001031816", "type": "external" } ], "gene_names_uniprotkb": "H33; HTR4; HTR5; HTR8; H3.3; T30N20_250; T5J17.200; T5J17.210; T5J17_200; T5K6.6; histone 3.3", "gene_names_refseq": "H3.3; T5J17.210; histone 3.3", "protein_names_uniprotkb": "Histone H3.3; Histone H3.2", "protein_names_refseq": "Histone superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G40030); (ath:AT4G40040); (ath:AT5G10980)", "pathway_count": 3, "publication_count": 26, "publication_id_list": "10617198;11130714;12456661;12581305;14593172;14610360;14712277;14992728;15010610;15014946;15457214;15598823;15753571;1593639;16258034;16262706;16299497;16546438;16648464;17174094;17363895;17439305;24218605;24626927;25086063;27862469", "class_list": "", "function": "Variant histone H3 which replaces conventional H3 in a wide range of nucleosomes in active genes. Constitutes the predominant form of histone H3 in non-dividing cells and is incorporated into chromatin independently of DNA synthesis. Deposited at sites of nucleosomal displacement throughout transcribed genes, suggesting that it represents an epigenetic imprint of transcriptionally active chromatin. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 3, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q6NR95", "ec_number_list": [], "go_molecular_function": "GO:0046982 protein heterodimerization activity;GO:1990188 euchromatin binding;GO:0031492 nucleosomal DNA binding;GO:0030527 structural constituent of chromatin;GO:0003677 DNA binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005730 nucleolus;GO:0005886 plasma membrane;GO:0000791 euchromatin;GO:0000786 nucleosome", "go_biological_process": "GO:0031507 heterochromatin formation", "synthesized_glycan_count": 0, "hit_score": 2.7, "record_id": "P59169-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "P59259-1", "uniprot_id": [ { "id": "H4_ARATH", "url": "https://www.uniprot.org/uniprot/P59259", "type": "external" } ], "mass": 11409.0, "length": 103, "protein_name": "Histone H4", "gene_name": "F16L2_140; F18L15.40; F24B9.25; F24B9.8; F5K20_30; F8N16.2; MMN10.22; MTH12.10; T11P11.4", "organism": "Arabidopsis", "refseq_name": "Histone superfamily protein", "refseq_ac": [ { "id": "NP_001332089", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001332089", "type": "external" } ], "gene_names_uniprotkb": "F16L2_140; F18L15.40; F24B9.25; F24B9.8; F5K20_30; F8N16.2; MMN10.22; MTH12.10; T11P11.4", "gene_names_refseq": "MMN10.3", "protein_names_uniprotkb": "Histone H4", "protein_names_refseq": "Histone superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G07660); (ath:AT1G07820); (ath:AT2G28740); (ath:AT3G45930); (ath:AT3G46320); (ath:AT3G53730); (ath:AT5G59690); (ath:AT5G59970)", "pathway_count": 8, "publication_count": 11, "publication_id_list": "10617197;11130712;11130713;14593172;17242155;17272265;19419532;24218605;27862469;9405937;9872454", "class_list": "", "function": "Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling., [UniProtKB, UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "P02308", "ec_number_list": [], "go_molecular_function": "GO:0003677 DNA binding;GO:0046982 protein heterodimerization activity;GO:0030527 structural constituent of chromatin", "go_cellular_component": "GO:0005576 extracellular region;GO:0005634 nucleus;GO:0005730 nucleolus;GO:0005777 peroxisome;GO:0005829 cytosol", "go_biological_process": "GO:0006334 nucleosome assembly;GO:0009414 response to water deprivation", "synthesized_glycan_count": 0, "hit_score": 1.2, "record_id": "P59259-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "P93834-1", "uniprot_id": [ { "id": "HXK2_ARATH", "url": "https://www.uniprot.org/uniprot/P93834", "type": "external" } ], "mass": 54490.0, "length": 502, "protein_name": "Hexokinase-2", "gene_name": "HXK2", "organism": "Arabidopsis", "refseq_name": "hexokinase 2", "refseq_ac": [ { "id": "NP_179576", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_179576", "type": "external" } ], "gene_names_uniprotkb": "HXK2; ATHXK2; F6F22.11; F6F22_11; HEXOKINASE 2; hexokinase 2", "gene_names_refseq": "ARABIDOPSIS THALIANA HEXOKINASE 2; ATHXK2; F6F22.11; F6F22_11; HEXOKINASE 2; HXK2; hexokinase 2", "protein_names_uniprotkb": "Hexokinase-2; 2.7.1.1", "protein_names_refseq": "hexokinase 2", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G19860)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "10617197;12953116;14593172;14671022;16920781;27862469;9014361", "class_list": "", "function": "Fructose and glucose phosphorylating enzyme (PubMed:9014361). May be involved in the phosphorylation of glucose during the export from mitochondrion to cytosol (PubMed:9014361). Acts as a sugar sensor which may regulate sugar-dependent gene repression or activation (PubMed:9014361). Mediates the effects of sugar on plant growth and development independently of its catalytic activity or the sugar metabolism (PubMed:9014361). May regulate the execution of program cell death in plant cells (PubMed:16920781)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q0WT93;Q84WJ5", "ec_number_list": [ { "id": "2.7.1.4", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.4", "type": "external" }, { "id": "2.7.1.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.1", "type": "external" }, { "id": "2.7.1.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.-", "type": "external" } ], "go_molecular_function": "GO:0004340 glucokinase activity;GO:0008865 fructokinase activity;GO:0005524 ATP binding;GO:0004396 hexokinase activity;GO:0005536 D-glucose binding", "go_cellular_component": "GO:0005739 mitochondrion;GO:0005741 mitochondrial outer membrane;GO:0005829 cytosol;GO:0009507 chloroplast", "go_biological_process": "GO:0006006 glucose metabolic process;GO:0001678 intracellular glucose homeostasis;GO:0006096 glycolytic process;GO:0012501 programmed cell death;GO:0051156 glucose 6-phosphate metabolic process", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "P93834-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q01667-1", "uniprot_id": [ { "id": "CAB6_ARATH", "url": "https://www.uniprot.org/uniprot/Q01667", "type": "external" } ], "mass": 25996.0, "length": 241, "protein_name": "Chlorophyll a-b binding protein 6, chloroplastic", "gene_name": "LHCA1", "organism": "Arabidopsis", "refseq_name": "chlorophyll a-b binding protein 6", "refseq_ac": [ { "id": "NP_191049", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_191049", "type": "external" } ], "gene_names_uniprotkb": "LHCA1; CAB6; F28P10.130; LHCI-730", "gene_names_refseq": "LHCA1; LHCI-730; photosystem I light harvesting complex gene 1", "protein_names_uniprotkb": "Chlorophyll a-b binding protein 6, chloroplastic; LHCI-730; LHCII type III CAB-6; Light-harvesting complex protein Lhca1", "protein_names_refseq": "chlorophyll a-b binding protein 6", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G54890)", "pathway_count": 1, "publication_count": 13, "publication_id_list": "10366881;10818090;11130713;12324436;14593172;15356385;15563470;17476261;19423640;19923216;21083539;21806943;27862469", "class_list": "", "function": "The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated., [UniProtKB, PubMed, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "B9DHK2;Q9C5R7", "ec_number_list": [], "go_molecular_function": "GO:0003729 mRNA binding;GO:0019904 protein domain specific binding;GO:0046872 metal ion binding;GO:0016168 chlorophyll binding", "go_cellular_component": "GO:0009535 chloroplast thylakoid membrane;GO:0009507 chloroplast;GO:0009522 photosystem I;GO:0009534 chloroplast thylakoid;GO:0009579 thylakoid", "go_biological_process": "GO:0009645 response to low light intensity stimulus;GO:0009409 response to cold;GO:0009416 response to light stimulus;GO:0009644 response to high light intensity;GO:0009768 photosynthesis, light harvesting in photosystem I", "synthesized_glycan_count": 0, "hit_score": 1.4, "record_id": "Q01667-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q0WV12-1", "uniprot_id": [ { "id": "ANL2_ARATH", "url": "https://www.uniprot.org/uniprot/Q0WV12", "type": "external" } ], "mass": 87194.0, "length": 802, "protein_name": "Homeobox-leucine zipper protein ANTHOCYANINLESS 2", "gene_name": "ANL2", "organism": "Arabidopsis", "refseq_name": "Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein", "refseq_ac": [ { "id": "NP_567183", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_567183", "type": "external" } ], "gene_names_uniprotkb": "ANL2; AHDP; ANTHOCYANINLESS 2; F6N23.10; F6N23_10; HOMEODOMAIN PROTEIN AHDP", "gene_names_refseq": "AHDP; ANL2; ANTHOCYANINLESS 2; ARABIDOPSIS THALIANA HOMEODOMAIN PROTEIN; F6N23.10; F6N23_10; HOMEODOMAIN PROTEIN AHDP", "protein_names_uniprotkb": "Homeobox-leucine zipper protein ANTHOCYANINLESS 2; HD-ZIP protein ANL2; Homeodomain protein AHDP; Homeodomain transcription factor ANL2", "protein_names_refseq": "Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G00730)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "10402424;10617198;10809443;16778018;22060019;25564655;27862469;8989876", "class_list": "", "function": "Probable transcription factor involved in the regulation of the tissue-specific accumulation of anthocyanins and in cellular organization of the primary root., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O65281;P93041;Q9SWZ6", "ec_number_list": [], "go_molecular_function": "GO:0003700 DNA-binding transcription factor activity;GO:0008289 lipid binding;GO:0000976 transcription cis-regulatory region binding;GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific;GO:0003677 DNA binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0009827 plant-type cell wall modification;GO:0010143 cutin biosynthetic process;GO:0048364 root development;GO:0048765 root hair cell differentiation", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "Q0WV12-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "P54888-1", "uniprot_id": [ { "id": "P5CS2_ARATH", "url": "https://www.uniprot.org/uniprot/P54888", "type": "external" } ], "mass": 78871.0, "length": 726, "protein_name": "Delta-1-pyrroline-5-carboxylate synthase B", "gene_name": "P5CS2; P5CSB", "organism": "Arabidopsis", "refseq_name": "delta 1-pyrroline-5-carboxylate synthase 2", "refseq_ac": [ { "id": "NP_191120", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_191120", "type": "external" } ], "gene_names_uniprotkb": "P5CS2; P5CSB; F1I16_20; P5CS2", "gene_names_refseq": "P5CS2; delta 1-pyrroline-5-carboxylate synthase 2", "protein_names_uniprotkb": "Delta-1-pyrroline-5-carboxylate synthase B; Gamma-glutamyl kinase; Glutamate-5-semialdehyde dehydrogenase; Glutamyl-gamma-semialdehyde dehydrogenase; P5CS B", "protein_names_refseq": "delta 1-pyrroline-5-carboxylate synthase 2", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G55610)", "pathway_count": 1, "publication_count": 18, "publication_id_list": "11130713;14593172;20466843;23111157;23328941;23572148;23660473;23776212;24043427;24601666;25561503;26091701;26187819;27419465;27862469;29167316;30833711;9351242", "class_list": "", "function": "P5CS plays a key role in proline biosynthesis, leading to osmoregulation in plants., [UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9M061", "ec_number_list": [ { "id": "1.2.1.41", "url": "https://www.rhea-db.org/rhea/?query=ec:1.2.1.41", "type": "external" }, { "id": "2.7.2.11", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.2.11", "type": "external" } ], "go_molecular_function": "GO:0005524 ATP binding;GO:0004349 glutamate 5-kinase activity;GO:0004350 glutamate-5-semialdehyde dehydrogenase activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005739 mitochondrion;GO:0009506 plasmodesma;GO:0009507 chloroplast", "go_biological_process": "GO:0042538 hyperosmotic salinity response;GO:0055129 L-proline biosynthetic process;GO:0009555 pollen development;GO:0009737 response to abscisic acid;GO:0009793 embryo development ending in seed dormancy", "synthesized_glycan_count": 0, "hit_score": 1.9, "record_id": "P54888-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q0WT48-1", "uniprot_id": [ { "id": "DNJ21_ARATH", "url": "https://www.uniprot.org/uniprot/Q0WT48", "type": "external" } ], "mass": 76904.0, "length": 687, "protein_name": "DnaJ protein ERDJ2A", "gene_name": "ATERDJ2A; ERDJ2A", "organism": "Arabidopsis", "refseq_name": "DnaJ / Sec63 Brl domains-containing protein", "refseq_ac": [ { "id": "NP_001031306", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001031306", "type": "external" } ], "gene_names_uniprotkb": "ATERDJ2A; ERDJ2A; C21; F18B13.2; F19K16.10; F19K16_10", "gene_names_refseq": "ATERDJ2A; F19K16.10; F19K16_10", "protein_names_uniprotkb": "DnaJ protein ERDJ2A; AtDjC21; AtERdj2A; AtJ21; Chaperone protein dnaJ 21; Endoplasmic reticulum dnaJ domain-containing protein 2A; Translocation protein SEC63 homolog ERDJ2A", "protein_names_refseq": "DnaJ / Sec63 Brl domains-containing protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G79940)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "11130712;11599562;18463617;18718935;20466843;22899711;25561503;27532006;27862469", "class_list": "", "function": "Required for integral membrane and secreted preprotein translocation across the endoplasmic reticulum membrane., [UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 1, "predicted_n_glycosites": 1, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "Q9CA96;Q9SSD9", "ec_number_list": [], "go_molecular_function": "GO:0003723 RNA binding", "go_cellular_component": "GO:0005739 mitochondrion;GO:0005783 endoplasmic reticulum;GO:0005794 Golgi apparatus;GO:0005789 endoplasmic reticulum membrane;GO:0031207 Sec62/Sec63 complex", "go_biological_process": "GO:0006620 post-translational protein targeting to endoplasmic reticulum membrane;GO:0015031 protein transport;GO:0006614 SRP-dependent cotranslational protein targeting to membrane", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "Q0WT48-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000010001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q05431-1", "uniprot_id": [ { "id": "APX1_ARATH", "url": "https://www.uniprot.org/uniprot/Q05431", "type": "external" } ], "mass": 27561.0, "length": 250, "protein_name": "L-ascorbate peroxidase 1, cytosolic", "gene_name": "APX1", "organism": "Arabidopsis", "refseq_name": "ascorbate peroxidase 1", "refseq_ac": [ { "id": "NP_001030991", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001030991", "type": "external" } ], "gene_names_uniprotkb": "APX1; ASCORBATE PEROXIDASE; ATAPX01; ATAPX1; CS1; F24B9.2; F24B9_2; MEE6; ascorbate peroxidase 1", "gene_names_refseq": "APX1; ASCORBATE PEROXIDASE; ATAPX01; ATAPX1; CS1; F24B9.2; F24B9_2; MEE6; ascorbate peroxidase 1; maternal effect embryo arrest 6", "protein_names_uniprotkb": "L-ascorbate peroxidase 1, cytosolic; 1.11.1.11; AP; AtAPx01", "protein_names_refseq": "ascorbate peroxidase 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G07890)", "pathway_count": 1, "publication_count": 13, "publication_id_list": "11130712;14593172;14739345;1558944;15608336;16502469;19245862;22092075;27862469;8422923;8534847;9144965;9808745", "class_list": "", "function": "Plays a key role in hydrogen peroxide removal. Constitutes a central component of the reactive oxygen gene network., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q0WLU2;Q2V4P8;Q2V4P9", "ec_number_list": [ { "id": "1.11.1.11", "url": "https://www.rhea-db.org/rhea/?query=ec:1.11.1.11", "type": "external" } ], "go_molecular_function": "GO:0046872 metal ion binding;GO:0020037 heme binding;GO:0004601 peroxidase activity;GO:0016688 L-ascorbate peroxidase activity;GO:0046409 p-coumarate 3-hydroxylase activity", "go_cellular_component": "GO:0005576 extracellular region;GO:0005737 cytoplasm;GO:0005794 Golgi apparatus;GO:0005829 cytosol;GO:0005886 plasma membrane", "go_biological_process": "GO:0034599 cellular response to oxidative stress;GO:0000302 response to reactive oxygen species;GO:0042744 hydrogen peroxide catabolic process;GO:0009408 response to heat;GO:0009699 phenylpropanoid biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 1.4, "record_id": "Q05431-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "P92981-1", "uniprot_id": [ { "id": "APR2_ARATH", "url": "https://www.uniprot.org/uniprot/P92981", "type": "external" } ], "mass": 50656.0, "length": 454, "protein_name": "5'-adenylylsulfate reductase 2, chloroplastic", "gene_name": "APR2", "organism": "Arabidopsis", "refseq_name": "5'adenylylphosphosulfate reductase 2", "refseq_ac": [ { "id": "NP_176409", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_176409", "type": "external" } ], "gene_names_uniprotkb": "APR2; APS REDUCTASE; APSR; ATAPR2; F19K23.11; F19K23_11; PRH43; PRH", "gene_names_refseq": "3'-PHOSPHOADENOSINE-5'-PHOSPHOSULFATE (PAPS) REDUCTASE HOMOLOG 43; 5'adenylylphosphosulfate reductase 2; ADENOSINE-5'-PHOSPHOSULFATE REDUCTASE; APR2; APS REDUCTASE; APSR; ATAPR2; F19K23.11; F19K23_11; PRH43; PRH", "protein_names_uniprotkb": "5'-adenylylsulfate reductase 2, chloroplastic; 1.8.4.9; 3'-phosphoadenosine-5'-phosphosulfate reductase homolog 43; APS sulfotransferase 2; Adenosine 5'-phosphosulfate 5'-adenylylsulfate sulfotransferase 2; PAPS reductase homolog 43; Prh-43; Thioredoxin-independent APS reductase 2", "protein_names_refseq": "5'adenylylphosphosulfate reductase 2", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G62180)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "11130712;11553635;14593172;16502469;22223895;24924143;27862469;8917599;8917600", "class_list": "", "function": "Reduces sulfate for Cys biosynthesis. Substrate preference is adenosine-5'-phosphosulfate (APS) >> 3'-phosphoadenosine-5'-phosphosulfate (PAPS). Uses glutathione or DTT as source of protons., [UniProtKB, PubMed, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 3, "reported_mutagensis": 2, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O04215;O04583;O22554;Q38947;Q541D4", "ec_number_list": [ { "id": "1.8.4.9", "url": "https://www.rhea-db.org/rhea/?query=ec:1.8.4.9", "type": "external" } ], "go_molecular_function": "GO:0004604 phosphoadenylyl-sulfate reductase (thioredoxin) activity;GO:0009973 adenylyl-sulfate reductase activity;GO:0033741 adenylyl-sulfate reductase (glutathione) activity", "go_cellular_component": "GO:0009507 chloroplast;GO:0009570 chloroplast stroma", "go_biological_process": "GO:0019344 cysteine biosynthetic process;GO:0000103 sulfate assimilation;GO:0019379 sulfate assimilation, phosphoadenylyl sulfate reduction by phosphoadenylyl-sulfate reductase (thioredoxin)", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "P92981-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "O80533-1", "uniprot_id": [ { "id": "O80533_ARATH", "url": "https://www.uniprot.org/uniprot/O80533", "type": "external" } ], "mass": 35773.0, "length": 325, "protein_name": "NAD(P)-binding Rossmann-fold superfamily protein", "gene_name": "F14J9.16; F14J9_16", "organism": "Arabidopsis", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "F14J9.16; F14J9_16", "gene_names_refseq": "", "protein_names_uniprotkb": "NAD(P)-binding Rossmann-fold superfamily protein", "protein_names_refseq": "", "tax_id": 3702, "disease": "", "pathway": "", "pathway_count": 0, "publication_count": 2, "publication_id_list": "11130712;27862469", "class_list": "", "function": "", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0016491 oxidoreductase activity;GO:0004022 alcohol dehydrogenase (NAD+) activity;GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "O80533-1", "record_type": "protein", "filter_code": "0000000.0000100.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "P50318-1", "uniprot_id": [ { "id": "PGKH2_ARATH", "url": "https://www.uniprot.org/uniprot/P50318", "type": "external" } ], "mass": 49939.0, "length": 478, "protein_name": "Phosphoglycerate kinase 2, chloroplastic", "gene_name": "CPGK2", "organism": "Arabidopsis", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "CPGK2; F14G9.19; F14G9_19; T6H22.1", "gene_names_refseq": "", "protein_names_uniprotkb": "Phosphoglycerate kinase 2, chloroplastic; 2.7.2.3", "protein_names_refseq": "", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G56190)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "10520454;11130712;14593172;17272265;21768351;23111157;23572148;24043427;25561503;27862469", "class_list": "", "function": "", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 5, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "Q42542;Q9C7J4;Q9SGU6", "ec_number_list": [ { "id": "2.7.2.3", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.2.3", "type": "external" } ], "go_molecular_function": "GO:0004618 phosphoglycerate kinase activity;GO:0004672 protein kinase activity;GO:0005524 ATP binding;GO:0046872 metal ion binding;GO:0043531 ADP binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005739 mitochondrion;GO:0005829 cytosol;GO:0016020 membrane;GO:0009507 chloroplast", "go_biological_process": "GO:0050691 regulation of defense response to virus by host;GO:0006094 gluconeogenesis;GO:0006096 glycolytic process;GO:0010027 thylakoid membrane organization;GO:0019253 reductive pentose-phosphate cycle", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "P50318-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000001001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q39083-1", "uniprot_id": [ { "id": "DI191_ARATH", "url": "https://www.uniprot.org/uniprot/Q39083", "type": "external" } ], "mass": 23275.0, "length": 206, "protein_name": "Protein DEHYDRATION-INDUCED 19", "gene_name": "DI19-1; DI19", "organism": "Arabidopsis", "refseq_name": "drought-induced 19", "refseq_ac": [ { "id": "NP_564715", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_564715", "type": "external" } ], "gene_names_uniprotkb": "DI19-1; DI19; ATDI19; DI19; F14G9.11; F14G9_11; drought-induced 19", "gene_names_refseq": "ATDI19; DI19; F14G9.11; F14G9_11; drought-induced 19", "protein_names_uniprotkb": "Protein DEHYDRATION-INDUCED 19; AtDi19-1", "protein_names_refseq": "drought-induced 19", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G56280)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "11130712;14593172;15937324;16438971;16786289;27862469;40875847;7823904", "class_list": "", "function": "", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "F4I523;Q56ZC1;Q94AR0;Q9C7K3", "ec_number_list": [], "go_molecular_function": "GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific;GO:0043565 sequence-specific DNA binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0045893 positive regulation of DNA-templated transcription;GO:0009414 response to water deprivation", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "Q39083-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "P92947-1", "uniprot_id": [ { "id": "MDAR_ARATH", "url": "https://www.uniprot.org/uniprot/P92947", "type": "external" } ], "mass": 53302.0, "length": 493, "protein_name": "Monodehydroascorbate reductase, chloroplastic/mitochondrial", "gene_name": "MDAR5; MDAR6", "organism": "Arabidopsis", "refseq_name": "monodehydroascorbate reductase 6", "refseq_ac": [ { "id": "NP_564818", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_564818", "type": "external" } ], "gene_names_uniprotkb": "MDAR5; MDAR6; MDAR6; MDHAR6; PMDAR-L; PMDAR-S; T12P18.4", "gene_names_refseq": "MDAR6; monodehydroascorbate reductase 6", "protein_names_uniprotkb": "Monodehydroascorbate reductase, chloroplastic/mitochondrial; 1.6.5.4; AtMDAR5; AtMDAR6; Monodehydroascorbate reductase 5, mitochondrial; Monodehydroascorbate reductase 6, chloroplastic", "protein_names_refseq": "monodehydroascorbate reductase 6", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G63940)", "pathway_count": 1, "publication_count": 13, "publication_id_list": "11130712;12154132;14593172;16146528;20405473;23111157;23328941;23660473;23776212;25561503;25732537;26339024;27862469", "class_list": "", "function": "Catalyzes the conversion of monodehydroascorbate (MDA) to ascorbate, oxidizing NADH in the process (PubMed:26339024). Mediates phytotoxicity of 2,4,6-trinitrotoluene (TNT), an explosive and environmental pollutant, by reducing TNT and forming a nitro radical that spontaneously reacts with atmospheric oxygen, generating reactive superoxide (PubMed:26339024). Can also use 1-chloro-2,4-dinitrobenzene (CDNB) as substrate, but not 1-chloro-4-nitrobenzene (CNB) (PubMed:26339024)., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q94CE2;Q9CAK5", "ec_number_list": [ { "id": "1.6.5.4", "url": "https://www.rhea-db.org/rhea/?query=ec:1.6.5.4", "type": "external" } ], "go_molecular_function": "GO:0005524 ATP binding;GO:0016651 oxidoreductase activity, acting on NAD(P)H;GO:0016656 monodehydroascorbate reductase (NADH) activity;GO:0016491 oxidoreductase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005739 mitochondrion;GO:0009507 chloroplast;GO:0009570 chloroplast stroma;GO:0010319 stromule", "go_biological_process": "GO:0009409 response to cold", "synthesized_glycan_count": 0, "hit_score": 1.4, "record_id": "P92947-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q2LAE1-1", "uniprot_id": [ { "id": "ASHH2_ARATH", "url": "https://www.uniprot.org/uniprot/Q2LAE1", "type": "external" } ], "mass": 193228.0, "length": 1759, "protein_name": "Histone-lysine N-methyltransferase ASHH2", "gene_name": "ASHH2; EFS", "organism": "Arabidopsis", "refseq_name": "histone-lysine N-methyltransferase", "refseq_ac": [ { "id": "NP_177854", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_177854", "type": "external" } ], "gene_names_uniprotkb": "ASHH2; EFS; ASH1 HOMOLOG 2; ASHH2; CCR1; EARLY FLOWERING IN SHORT DAYS; EFS; LAZ2; LAZARUS 2; SDG8; SET DOMAIN GROUP 8; SET8; T14N5.15; T14N5_15", "gene_names_refseq": "ASH1 HOMOLOG 2; ASHH2; CAROTENOID CHLOROPLAST REGULATORY1; CCR1; EARLY FLOWERING IN SHORT DAYS; EFS; LAZ2; LAZARUS 2; SDG8; SET DOMAIN GROUP 8; T14N5.15; T14N5_15", "protein_names_uniprotkb": "Histone-lysine N-methyltransferase ASHH2; 2.1.1.-; ASH1 homolog 2; H3-K36-HMTase 8; H3-K4-HMTase; Histone H3-K36 methyltransferase 8; Protein EARLY FLOWERING IN SHORT DAYS; Protein LAZARUS 2; Protein SET DOMAIN GROUP 8", "protein_names_refseq": "histone-lysine N-methyltransferase", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G77300)", "pathway_count": 1, "publication_count": 19, "publication_id_list": "10518493;11130712;11691919;16258034;16299497;18070919;19121105;19915673;20466843;20711170;20949080;21282526;21522130;23328941;23660473;24838002;25561503;27862469;30833711", "class_list": "", "function": "Histone methyltransferase involved in di and tri-methylation of 'Lys-36' of histone H3 (H3K36me2 and H3K36me3). Binds to H3 already mono- or di-methylated on 'Lys-4'(H3K4me1 or H3K4me2), but not to H3K4me3. H3K4me and H3K36me represent specific tags for epigenetic transcriptional activation. Positively regulates FLC transcription to prevent early flowering transition. Required for flowering transition in response to vernalization and for the maintenance of FLC expression in late embryos, but dispensable for the initial reactivation in early embryos during reprogramming. Also seems to modulate several traits including floral organ size, root size and dormancy. Promotes apical dominance (PubMed:10518493, PubMed:16258034, PubMed:16299497, PubMed:18070919, PubMed:19915673, PubMed:20711170). Directly involved in the tri-methylation of 'Lys-36' of histone H3 (H3K36me3) at LAZ5 chromatin to maintain a transcriptionally active state of LAZ5, a TIR-NB-LRR protein involved in innate immunity (PubMed:20949080). Required for brassinosteroid (BR)-induced gene expression and histone H3 trimethylation on 'Lys-36' (H3K36me3) in BR-regulated genes (PubMed:24838002)., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 13, "reported_mutagensis": 5, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A9QA57;O80663;Q56WW4", "ec_number_list": [ { "id": "2.1.1.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.1.1.-", "type": "external" } ], "go_molecular_function": "GO:0008270 zinc ion binding;GO:0042800 histone H3K4 methyltransferase activity;GO:0032183 SUMO binding;GO:0046975 histone H3K36 methyltransferase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0000775 chromosome, centromeric region;GO:0000785 chromatin;GO:0005694 chromosome", "go_biological_process": "GO:0006355 regulation of DNA-templated transcription;GO:0032259 methylation;GO:0040029 epigenetic regulation of gene expression;GO:0043067 regulation of programmed cell death;GO:0016116 carotenoid metabolic process", "synthesized_glycan_count": 0, "hit_score": 2.0, "record_id": "Q2LAE1-1", "record_type": "protein", "filter_code": "0000000.0100101.010000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "F4I9J8-1", "uniprot_id": [ { "id": "F4I9J8_ARATH", "url": "https://www.uniprot.org/uniprot/F4I9J8", "type": "external" } ], "mass": 57798.0, "length": 513, "protein_name": "RNA-binding (RRM/RBD/RNP motifs) family protein", "gene_name": "F5D21.15; F5D21_15", "organism": "Arabidopsis", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "F5D21.15; F5D21_15", "gene_names_refseq": "", "protein_names_uniprotkb": "RNA-binding (RRM/RBD/RNP motifs) family protein", "protein_names_refseq": "", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G51520)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "11130712;27862469", "class_list": "", "function": "", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0003677 DNA binding;GO:0003723 RNA binding;GO:0008270 zinc ion binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "F4I9J8-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "P93836-1", "uniprot_id": [ { "id": "HPPD_ARATH", "url": "https://www.uniprot.org/uniprot/P93836", "type": "external" } ], "mass": 48816.0, "length": 445, "protein_name": "4-hydroxyphenylpyruvate dioxygenase", "gene_name": "HPD; PDS1", "organism": "Arabidopsis", "refseq_name": "4-hydroxyphenylpyruvate dioxygenase", "refseq_ac": [ { "id": "NP_172144", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_172144", "type": "external" } ], "gene_names_uniprotkb": "HPD; PDS1; F12K11.9; F12K11_9; HPD; HPPD; PDS1; phytoene desaturation 1", "gene_names_refseq": "4-HYDROXYPHENYLPYRUVATE DIOXYGENASE; 4-hydroxyphenylpyruvate dioxygenase; F12K11.9; F12K11_9; HPD; HPPD; P-HYDROXYPHENYLPYRUVATE DIOXYGENASE; PDS1; phytoene desaturation 1", "protein_names_uniprotkb": "4-hydroxyphenylpyruvate dioxygenase; 1.13.11.27; 4-hydroxyphenylpyruvic acid oxidase; 4HPPD; HPD; HPPDase", "protein_names_refseq": "4-hydroxyphenylpyruvate dioxygenase", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G06570)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "10198110;11130712;14593172;15084729;15301540;25561503;27862469", "class_list": "", "function": "Catalyzes the conversion of 4-hydroxyphenylpyruvic acid to homogentisic acid, one of the steps in tyrosine catabolism., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "F4IDP1;O04330;Q9SHK1", "ec_number_list": [ { "id": "1.13.11.27", "url": "https://www.rhea-db.org/rhea/?query=ec:1.13.11.27", "type": "external" } ], "go_molecular_function": "GO:0003868 4-hydroxyphenylpyruvate dioxygenase activity;GO:0005506 iron ion binding;GO:0042802 identical protein binding;GO:0046872 metal ion binding", "go_cellular_component": "GO:0005576 extracellular region;GO:0005737 cytoplasm;GO:0005739 mitochondrion;GO:0005829 cytosol;GO:0009507 chloroplast", "go_biological_process": "GO:0006559 L-phenylalanine catabolic process;GO:0006572 L-tyrosine catabolic process;GO:0010189 vitamin E biosynthetic process;GO:0010236 plastoquinone biosynthetic process;GO:0016117 carotenoid biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "P93836-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "F4IDX2-1", "uniprot_id": [ { "id": "F4IDX2_ARATH", "url": "https://www.uniprot.org/uniprot/F4IDX2", "type": "external" } ], "mass": 17937.0, "length": 162, "protein_name": "Proline-rich family protein", "gene_name": "F13K23.6; F13K23_6", "organism": "Arabidopsis", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "F13K23.6; F13K23_6", "gene_names_refseq": "", "protein_names_uniprotkb": "Proline-rich family protein", "protein_names_refseq": "", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G12810)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "11130712;27862469", "class_list": "", "function": "", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "F4IDX2-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "P54887-1", "uniprot_id": [ { "id": "P5CS1_ARATH", "url": "https://www.uniprot.org/uniprot/P54887", "type": "external" } ], "mass": 77702.0, "length": 717, "protein_name": "Delta-1-pyrroline-5-carboxylate synthase A", "gene_name": "P5CS1; P5CSA", "organism": "Arabidopsis", "refseq_name": "delta1-pyrroline-5-carboxylate synthase 1", "refseq_ac": [ { "id": "NP_001189714", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001189714", "type": "external" } ], "gene_names_uniprotkb": "P5CS1; P5CSA; ATP5CS; P5CS1; T5I7.10; T5I7_10", "gene_names_refseq": "ATP5CS; P5CS1; T5I7.10; T5I7_10; delta1-pyrroline-5-carboxylate synthase 1", "protein_names_uniprotkb": "Delta-1-pyrroline-5-carboxylate synthase A; Gamma-glutamyl kinase; Glutamate-5-semialdehyde dehydrogenase; Glutamyl-gamma-semialdehyde dehydrogenase; P5CS A", "protein_names_refseq": "delta1-pyrroline-5-carboxylate synthase 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G39800)", "pathway_count": 1, "publication_count": 17, "publication_id_list": "10617197;14593172;19376835;20466843;23328941;23572148;23660473;23776212;24043427;25561503;26091701;26187819;27862469;30833711;7556633;7773306;9351242", "class_list": "", "function": "P5CS plays a key role in proline biosynthesis, leading to osmoregulation in plants., [UniProtKB, UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [ { "id": "1.2.1.41", "url": "https://www.rhea-db.org/rhea/?query=ec:1.2.1.41", "type": "external" }, { "id": "2.7.2.11", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.2.11", "type": "external" } ], "go_molecular_function": "GO:0005524 ATP binding;GO:0004349 glutamate 5-kinase activity;GO:0004350 glutamate-5-semialdehyde dehydrogenase activity;GO:0017084 delta1-pyrroline-5-carboxylate synthetase activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005739 mitochondrion;GO:0005794 Golgi apparatus;GO:0009507 chloroplast", "go_biological_process": "GO:0006979 response to oxidative stress;GO:0009651 response to salt stress;GO:0009414 response to water deprivation;GO:0042538 hyperosmotic salinity response;GO:0055129 L-proline biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 1.8, "record_id": "P54887-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "P93759-1", "uniprot_id": [ { "id": "CDPKE_ARATH", "url": "https://www.uniprot.org/uniprot/P93759", "type": "external" } ], "mass": 60054.0, "length": 530, "protein_name": "Calcium-dependent protein kinase 14", "gene_name": "CPK14", "organism": "Arabidopsis", "refseq_name": "calcium-dependent protein kinase 14", "refseq_ac": [ { "id": "NP_181717", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_181717", "type": "external" } ], "gene_names_uniprotkb": "CPK14; T11A7.4; T11A7_4; T6D20.24", "gene_names_refseq": "CPK14; T11A7.4; T11A7_4; calcium-dependent protein kinase 14", "protein_names_uniprotkb": "Calcium-dependent protein kinase 14; 2.7.11.1", "protein_names_refseq": "calcium-dependent protein kinase 14", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G41860)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "10617197;12068094;12805596;17147637;27862469", "class_list": "", "function": "May play a role in signal transduction pathways that involve calcium as a second messenger., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0MET2;Q3EBI3", "ec_number_list": [ { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.3.2.27", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.2.27", "type": "external" }, { "id": "2.7.10.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.-", "type": "external" }, { "id": "3.1.4.46", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.4.46", "type": "external" }, { "id": "2.7.11.25", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.25", "type": "external" }, { "id": "2.7.11.22", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.22", "type": "external" }, { "id": "2.7.10.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.1", "type": "external" }, { "id": "2.7.11.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.-", "type": "external" }, { "id": "2.7.11.24", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.24", "type": "external" }, { "id": "2.7.12.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.1", "type": "external" }, { "id": "2.7.11.23", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.23", "type": "external" }, { "id": "2.7.12.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.2", "type": "external" }, { "id": "2.7.-.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.-.-", "type": "external" }, { "id": "3.1.26.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.26.-", "type": "external" }, { "id": "3.1.3.16", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.16", "type": "external" }, { "id": "2.7.11.34", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.34", "type": "external" }, { "id": "4.6.1.2", "url": "https://www.rhea-db.org/rhea/?query=ec:4.6.1.2", "type": "external" } ], "go_molecular_function": "GO:0009931 calcium-dependent protein serine/threonine kinase activity;GO:0005516 calmodulin binding;GO:0005524 ATP binding;GO:0005509 calcium ion binding;GO:0004683 calcium/calmodulin-dependent protein kinase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005886 plasma membrane;GO:0016020 membrane", "go_biological_process": "GO:0035556 intracellular signal transduction", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "P93759-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q3EBR6-1", "uniprot_id": [ { "id": "PLA16_ARATH", "url": "https://www.uniprot.org/uniprot/Q3EBR6", "type": "external" } ], "mass": 60402.0, "length": 529, "protein_name": "Phospholipase A1-Igamma2, chloroplastic", "gene_name": "DALL3", "organism": "Arabidopsis", "refseq_name": "alpha/beta-Hydrolases superfamily protein", "refseq_ac": [ { "id": "NP_565701", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_565701", "type": "external" } ], "gene_names_uniprotkb": "DALL3; DAD1-Like Lipase 3; T6B20.10; T6B20_10", "gene_names_refseq": "DAD1-Like Lipase 3; DALL3; T6B20.10; T6B20_10", "protein_names_uniprotkb": "Phospholipase A1-Igamma2, chloroplastic; 3.1.1.-; DAD1-like lipase 3", "protein_names_refseq": "alpha/beta-Hydrolases superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G30550)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "10617197;14593172;15130548;18267087;19527719;20348210;24430866;27862469;31928671", "class_list": "", "function": "Acylhydrolase with broad specificity (PubMed:19527719). Catalyzes the hydrolysis of phosphatidylcholine at the sn-1 position (PubMed:19527719). Possesses moderate activity toward phosphatidylcholine (PC), monogalactosyldiacylglycerol (MGDG), digalactosyldiacylglycerol (DGDG) and triacylglycerol (TAG) (PubMed:19527719)., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O04340", "ec_number_list": [ { "id": "3.1.1.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.1.-", "type": "external" }, { "id": "3.1.1.3", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.1.3", "type": "external" }, { "id": "5.2.1.13", "url": "https://www.rhea-db.org/rhea/?query=ec:5.2.1.13", "type": "external" }, { "id": "3.1.1.32", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.1.32", "type": "external" }, { "id": "3.1.1.26", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.1.26", "type": "external" } ], "go_molecular_function": "GO:0004620 phospholipase activity;GO:0008970 phospholipase A1 activity;GO:0004806 triacylglycerol lipase activity;GO:0047714 galactolipase activity", "go_cellular_component": "GO:0005576 extracellular region;GO:0009507 chloroplast", "go_biological_process": "GO:0016042 lipid catabolic process", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "Q3EBR6-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q39253-1", "uniprot_id": [ { "id": "CAX1_ARATH", "url": "https://www.uniprot.org/uniprot/Q39253", "type": "external" } ], "mass": 50177.0, "length": 463, "protein_name": "Vacuolar cation/proton exchanger 1", "gene_name": "CAX1", "organism": "Arabidopsis", "refseq_name": "cation exchanger 1", "refseq_ac": [ { "id": "NP_181352", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_181352", "type": "external" } ], "gene_names_uniprotkb": "CAX1; ATCAX1; F16M14.10; F16M14_10; RARE COLD INDUCIBLE 4; RCI4; cation exchanger 1", "gene_names_refseq": "ATCAX1; CAX1; F16M14.10; F16M14_10; HIGH AFFINITY CALCIUM ANTIPORTER CAX1; RARE COLD INDUCIBLE 4; RCI4; cation exchanger 1", "protein_names_uniprotkb": "Vacuolar cation/proton exchanger 1; Ca(2+)/H(+) antiporter CAX1; Ca(2+)/H(+) exchanger 1; Protein CATION EXCHANGER 1; Protein RARE COLD INDUCIBLE 4", "protein_names_refseq": "cation exchanger 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G38170)", "pathway_count": 1, "publication_count": 20, "publication_id_list": "10559438;10617197;11500563;11562366;11706183;12006570;12480930;12566577;14593172;14630965;14960315;15862304;15994298;15998121;16055687;16244156;22223895;25561503;27862469;8710949", "class_list": "", "function": "Vacuolar cation/proton exchanger (CAX). Translocates Ca(2+) and other metal ions into vacuoles using the proton gradient formed by H(+)-ATPase and H(+)-pyrophosphatase. Involved in ion homeostasis in association with CAX3. May play a role in cold-acclimation response., [UniProtKB, PubMed, PubMed, PubMed, UniProtKB, UniProtKB]", "predicted_glycosites": 1, "predicted_n_glycosites": 1, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 3, "reported_mutagensis": 20, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "O80442;Q56WC8", "ec_number_list": [], "go_molecular_function": "GO:0015369 calcium:proton antiporter activity", "go_cellular_component": "GO:0005774 vacuolar membrane;GO:0005773 vacuole;GO:0000325 plant-type vacuole;GO:0009507 chloroplast;GO:0009705 plant-type vacuole membrane", "go_biological_process": "GO:0006816 calcium ion transport;GO:0006874 intracellular calcium ion homeostasis;GO:0006812 monoatomic cation transport;GO:0009631 cold acclimation;GO:0009651 response to salt stress", "synthesized_glycan_count": 0, "hit_score": 2.1, "record_id": "Q39253-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000010001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "P42747-1", "uniprot_id": [ { "id": "UBC14_ARATH", "url": "https://www.uniprot.org/uniprot/P42747", "type": "external" } ], "mass": 18728.0, "length": 167, "protein_name": "Ubiquitin-conjugating enzyme E2 14", "gene_name": "UBC14", "organism": "Arabidopsis", "refseq_name": "ubiquitin-conjugating enzyme 14", "refseq_ac": [ { "id": "NP_567020", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_567020", "type": "external" } ], "gene_names_uniprotkb": "UBC14; T22E16.40; UBC3; UBC7", "gene_names_refseq": "UBC14; ubiquitin-conjugating enzyme 14", "protein_names_uniprotkb": "Ubiquitin-conjugating enzyme E2 14; 2.3.2.23; E2 ubiquitin-conjugating enzyme 14; TAYO29; UbcAt3; Ubiquitin carrier protein 14; Ubiquitin-protein ligase 14", "protein_names_refseq": "ubiquitin-conjugating enzyme 14", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G55380)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "11130713;14593172;16339806;22223895;27862469;8078482;8281187;8647807", "class_list": "", "function": "Accepts the ubiquitin from the E1 complex and catalyzes its covalent attachment to other proteins. Involved in the formation of multiubiquitin chains. Signal the protein for selective degradation., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q4TYZ6", "ec_number_list": [], "go_molecular_function": "GO:0005524 ATP binding;GO:0004842 ubiquitin-protein transferase activity;GO:0061631 ubiquitin conjugating enzyme activity;GO:0016740 transferase activity", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0000209 protein polyubiquitination;GO:0006511 ubiquitin-dependent protein catabolic process", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "P42747-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q39033-1", "uniprot_id": [ { "id": "PLCD2_ARATH", "url": "https://www.uniprot.org/uniprot/Q39033", "type": "external" } ], "mass": 66122.0, "length": 581, "protein_name": "Phosphoinositide phospholipase C 2", "gene_name": "PLC2", "organism": "Arabidopsis", "refseq_name": "phospholipase C 2", "refseq_ac": [ { "id": "NP_001030660", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001030660", "type": "external" } ], "gene_names_uniprotkb": "PLC2; ATPLC2; T8G24.4; phospholipase C 2", "gene_names_refseq": "ATPLC2; PLC2; phospholipase C 2", "protein_names_uniprotkb": "Phosphoinositide phospholipase C 2; 3.1.4.11; AtPLC2; PI-PLC2; Phosphoinositide phospholipase PLC2", "protein_names_refseq": "phospholipase C 2", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G08510)", "pathway_count": 1, "publication_count": 28, "publication_id_list": "11130713;11377433;12226484;14506206;14593172;15308754;17586839;17651370;18463617;20374526;20466843;21768351;22060019;23111157;23172892;23572148;23776212;23820729;24043427;24601666;25561503;26091701;27419465;27532006;27862469;28011693;29167316;9177324", "class_list": "", "function": "The production of the second messenger molecules diacylglycerol (DAG) and inositol 1,4,5-trisphosphate (IP3) is mediated by activated phosphatidylinositol-specific phospholipase C enzymes. At physiological calcium concentration, the preferred substrate is phosphatidylinositol 4,5-bisphosphate versus phosphatidylinositol., [UniProtKB, UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 9, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q56XL3;Q8LG47", "ec_number_list": [ { "id": "3.1.4.11", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.4.11", "type": "external" } ], "go_molecular_function": "GO:0004435 phosphatidylinositol-4,5-bisphosphate phospholipase C activity;GO:0004629 phospholipase C activity", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "GO:0016042 lipid catabolic process;GO:0051209 release of sequestered calcium ion into cytosol;GO:0042742 defense response to bacterium;GO:0048015 phosphatidylinositol-mediated signaling;GO:0009553 embryo sac development", "synthesized_glycan_count": 0, "hit_score": 2.9, "record_id": "Q39033-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q27GK7-1", "uniprot_id": [ { "id": "TPR4_ARATH", "url": "https://www.uniprot.org/uniprot/Q27GK7", "type": "external" } ], "mass": 124104.0, "length": 1135, "protein_name": "Topless-related protein 4", "gene_name": "TPR4; WSIP2", "organism": "Arabidopsis", "refseq_name": "WUS-interacting protein 2", "refseq_ac": [ { "id": "NP_001325883", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001325883", "type": "external" } ], "gene_names_uniprotkb": "TPR4; WSIP2; MSJ11.27; TOPLESS-RELATED 4; TPR4; WSIP2; WUS-interacting protein 2", "gene_names_refseq": "TOPLESS-RELATED 4; TPR4; WSIP2; WUS-interacting protein 2", "protein_names_uniprotkb": "Topless-related protein 4; WUS-interacting protein 2", "protein_names_refseq": "WUS-interacting protein 2", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G15880)", "pathway_count": 1, "publication_count": 20, "publication_id_list": "10819329;11130713;14593172;16461579;16763149;19423640;20466843;23444332;23776212;24601666;25035403;25378179;25527103;25561503;26601214;27862469;28154133;29167316;29654922;30833711", "class_list": "", "function": "Transcription corepressor of Zinc finger transcription factors GAF1/IDD2 and ENY/IDD1 in regulation of gibberellin homeostasis and signaling., [UniProtKB, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 8, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 8, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 8, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 1, "reported_phosphosites": 7, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 0, "biomarker_type": "", "glycan_count": 1, "disease_count": 0, "glyco_site_count": 8, "binding_glycan_count": 0, "secondary_ac_list": "B9DHS5;Q0WMG2;Q3EB60;Q9LVZ2", "ec_number_list": [], "go_molecular_function": "GO:0003714 transcription corepressor activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm", "go_biological_process": "GO:0000122 negative regulation of transcription by RNA polymerase II;GO:0006351 DNA-templated transcription;GO:0006355 regulation of DNA-templated transcription;GO:0009938 negative regulation of gibberellic acid mediated signaling pathway;GO:0010072 primary shoot apical meristem specification", "synthesized_glycan_count": 0, "hit_score": 3.0, "record_id": "Q27GK7-1", "record_type": "protein", "filter_code": "0000000.0000101.010000.100000000000000000.0100000001001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q2V3L3-1", "uniprot_id": [ { "id": "YY1_ARATH", "url": "https://www.uniprot.org/uniprot/Q2V3L3", "type": "external" } ], "mass": 44703.0, "length": 387, "protein_name": "Zinc finger transcription factor YY1", "gene_name": "YY1", "organism": "Arabidopsis", "refseq_name": "zinc finger (C2H2 type) family protein", "refseq_ac": [ { "id": "NP_001031589", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001031589", "type": "external" } ], "gene_names_uniprotkb": "YY1; AtYY1; F8H12; Yin Yang 1", "gene_names_refseq": "AtYY1; YY1; Yin Yang 1", "protein_names_uniprotkb": "Zinc finger transcription factor YY1; AtYY1; Protein YIN YANG 1", "protein_names_refseq": "zinc finger (C2H2 type) family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G06634)", "pathway_count": 1, "publication_count": 16, "publication_id_list": "10617198;11853315;19376835;20466843;21768351;22508367;23328941;23572148;23660473;24451981;25561503;26091701;26961720;27862469;28348572;30833711", "class_list": "", "function": "Dual-function transcription factor with both repression and activation activities. Binds to 5'-CCATATT-3' motif in target gene promoters (e.g. ABR1) (PubMed:26961720). Also binds to G-rich DNA motif 5'-GGGGGCAGTGG-3' (PubMed:22508367). Regulates the expression of genes involved in diverse cellular pathways, including glucose metabolism, photosynthesis, phototropism and stress response (e.g. salt, drought and osmotic stress) (PubMed:22508367, PubMed:26961720). Regulates plant immunity, especially during necrotrophic fungal infection (e.g. B.cinerea) (PubMed:24451981). Binds to ABR1 promoter and promotes its expression, thus negatively regulating the abscisic acid (ABA) signaling pathway. Represses ABA- and salt-responsive genes expression (PubMed:26961720)., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 5, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q27GJ7;Q8W3M5", "ec_number_list": [], "go_molecular_function": "GO:0008270 zinc ion binding;GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding;GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific;GO:0043565 sequence-specific DNA binding;GO:0003677 DNA binding", "go_cellular_component": "GO:0005634 nucleus;GO:0031011 Ino80 complex;GO:0005667 transcription regulator complex;GO:0000785 chromatin;GO:0031519 PcG protein complex", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006357 regulation of transcription by RNA polymerase II;GO:0006952 defense response;GO:0006970 response to osmotic stress;GO:0006355 regulation of DNA-templated transcription", "synthesized_glycan_count": 0, "hit_score": 1.7, "record_id": "Q2V3L3-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q0WQ75-1", "uniprot_id": [ { "id": "VPS51_ARATH", "url": "https://www.uniprot.org/uniprot/Q0WQ75", "type": "external" } ], "mass": 88516.0, "length": 780, "protein_name": "Vacuolar protein sorting-associated protein 51 homolog", "gene_name": "UNH; VPS51", "organism": "Arabidopsis", "refseq_name": "Vps51/Vps67 family (components of vesicular transport) protein", "refseq_ac": [ { "id": "NP_192112", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_192112", "type": "external" } ], "gene_names_uniprotkb": "UNH; VPS51; T10M13.4; T10M13_4; UNHINGED; UNH; VPS51; vacuolar protein sorting 51", "gene_names_refseq": "T10M13.4; T10M13_4; UNHINGED; UNH; VPS51; vacuolar protein sorting 51", "protein_names_uniprotkb": "Vacuolar protein sorting-associated protein 51 homolog; Protein UNHINGED", "protein_names_refseq": "Vps51/Vps67 family (components of vesicular transport) protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G02030)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "10617198;22223895;23776212;24757006;25561503;26187819;27862469;30833711", "class_list": "", "function": "Acts as a component of the GARP complex that is involved in retrograde transport from early and late endosomes to the trans-Golgi network (TGN). The GARP complex is required for the maintenance of protein retrieval from endosomes to the TGN, acid hydrolase sorting, lysosome function, endosomal cholesterol traffic and autophagy. VPS51 participates in retrograde transport of acid hydrolase receptors, likely by promoting tethering and SNARE-dependent fusion of endosome-derived carriers to the TGN. Acts as a component of the EARP complex that is involved in endocytic recycling. The EARP complex associates with Rab4-positive endosomes and promotes recycling of internalized transferrin receptor (TFRC) to the plasma membrane (By similarity). Required for vacuolar targeting and cellular trafficking. Involved in the regulation of vascular tissue patterning, probably by regulating PIN1 expression pattern, thus modulating auxin flux. Important to prevent PIN1 accumulation within margin cells, possibly by targeting PIN1 to the lytic vacuole. Regulates PIN1 and ATHB8 expression pattern in secondary veins (PubMed:24757006)., [UniProtKB, UniProtKB, PubMed]; Acts as component of the GARP complex that is involved in retrograde transport from early and late endosomes to the trans-Golgi network (TGN)., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 8, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O04247", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0000938 GARP complex;GO:1990745 EARP complex;GO:0005829 cytosol;GO:0016020 membrane;GO:0055037 recycling endosome", "go_biological_process": "GO:0007034 vacuolar transport;GO:0006869 lipid transport;GO:0015031 protein transport;GO:0006914 autophagy;GO:0016192 vesicle-mediated transport", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "Q0WQ75-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q39196-1", "uniprot_id": [ { "id": "PIP14_ARATH", "url": "https://www.uniprot.org/uniprot/Q39196", "type": "external" } ], "mass": 30693.0, "length": 287, "protein_name": "Probable aquaporin PIP1-4", "gene_name": "PIP1.4; PIP1", "organism": "Arabidopsis", "refseq_name": "plasma membrane intrinsic protein 1;4", "refseq_ac": [ { "id": "NP_567178", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_567178", "type": "external" } ], "gene_names_uniprotkb": "PIP1.4; PIP1; A_IG005I10.2; A_IG005I10_2; F5I10.2; F5I10_2; PIP1:4; PIP1E; TMP-C; TMPC; TRANSMEMBRANE PROTEIN C", "gene_names_refseq": "4; A_IG005I10.2; A_IG005I10_2; F5I10.2; F5I10_2; PIP1E; PIP1; PLASMA MEMBRANE INTRINSIC PROTEIN 1E; TMP-C; TRANSMEMBRANE PROTEIN C; plasma membrane intrinsic protein 1", "protein_names_uniprotkb": "Probable aquaporin PIP1-4; 4; AtPIP1; Plasma membrane intrinsic protein 1-4; TMP-C; Transmembrane protein C", "protein_names_refseq": "4; plasma membrane intrinsic protein 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G00430)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "10617198;11806824;14593172;16839310;25561503;27862469;7972502;8980528", "class_list": "", "function": "Aquaporins facilitate the transport of water and small neutral solutes across cell membranes., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O23059;O23829", "ec_number_list": [], "go_molecular_function": "GO:0015250 water channel activity;GO:0015267 channel activity", "go_cellular_component": "GO:0005829 cytosol;GO:0005886 plasma membrane;GO:0016020 membrane", "go_biological_process": "GO:0009414 response to water deprivation;GO:0006833 water transport", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "Q39196-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "F4JJA3-1", "uniprot_id": [ { "id": "F4JJA3_ARATH", "url": "https://www.uniprot.org/uniprot/F4JJA3", "type": "external" } ], "mass": 42356.0, "length": 367, "protein_name": "Uncharacterized protein", "gene_name": "F23J3.90; F23J3_90", "organism": "Arabidopsis", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "F23J3.90; F23J3_90", "gene_names_refseq": "", "protein_names_uniprotkb": "Uncharacterized protein", "protein_names_refseq": "", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G09060)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "10617198;27862469", "class_list": "", "function": "", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005737 cytoplasm", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "F4JJA3-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "P92980-1", "uniprot_id": [ { "id": "APR3_ARATH", "url": "https://www.uniprot.org/uniprot/P92980", "type": "external" } ], "mass": 50695.0, "length": 458, "protein_name": "5'-adenylylsulfate reductase 3, chloroplastic", "gene_name": "APR3", "organism": "Arabidopsis", "refseq_name": "APS reductase 3", "refseq_ac": [ { "id": "NP_193930", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_193930", "type": "external" } ], "gene_names_uniprotkb": "APR3; APS reductase 3; ATAPR3; F1N20.90; F1N20_90; PAPS REDUCTASE HOMOLOG 26; PRH-26; PRH26", "gene_names_refseq": "5'-ADENYLYLPHOSPHOSULFATE REDUCTASE; APR3; APS reductase 3; ATAPR3; F1N20.90; F1N20_90; PAPS REDUCTASE HOMOLOG 26; PRH-26; PRH26", "protein_names_uniprotkb": "5'-adenylylsulfate reductase 3, chloroplastic; 1.8.4.9; 3'-phosphoadenosine-5'-phosphosulfate reductase homolog 26; APS sulfotransferase 3; Adenosine 5'-phosphosulfate 5'-adenylylsulfate sulfotransferase 3; PAPS reductase homolog 26; Prh-26; Thioredoxin-independent APS reductase 3", "protein_names_refseq": "APS reductase 3", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G21990)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "10617198;14593172;19423640;27862469;8917599;8917600", "class_list": "", "function": "Reduces sulfate for Cys biosynthesis. Substrate preference is adenosine-5'-phosphosulfate (APS) >> 3'-phosphoadenosine-5'-phosphosulfate (PAPS). Uses glutathione or DTT as source of protons., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "C0Z2S3;O48887;Q38948;Q8LAV2", "ec_number_list": [ { "id": "1.8.4.9", "url": "https://www.rhea-db.org/rhea/?query=ec:1.8.4.9", "type": "external" } ], "go_molecular_function": "GO:0046872 metal ion binding;GO:0051539 4 iron, 4 sulfur cluster binding;GO:0004604 phosphoadenylyl-sulfate reductase (thioredoxin) activity;GO:0009973 adenylyl-sulfate reductase activity;GO:0033741 adenylyl-sulfate reductase (glutathione) activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0009507 chloroplast", "go_biological_process": "GO:0019344 cysteine biosynthetic process;GO:0000103 sulfate assimilation;GO:0019379 sulfate assimilation, phosphoadenylyl sulfate reduction by phosphoadenylyl-sulfate reductase (thioredoxin)", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "P92980-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1PE17-1", "uniprot_id": [ { "id": "CDPKI_ARATH", "url": "https://www.uniprot.org/uniprot/Q1PE17", "type": "external" } ], "mass": 60214.0, "length": 534, "protein_name": "Calcium-dependent protein kinase 18", "gene_name": "CPK18", "organism": "Arabidopsis", "refseq_name": "calcium-dependent protein kinase 18", "refseq_ac": [ { "id": "NP_195331", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_195331", "type": "external" } ], "gene_names_uniprotkb": "CPK18; T19K4.200; T19K4_200", "gene_names_refseq": "CPK18; T19K4.200; T19K4_200; calcium-dependent protein kinase 18", "protein_names_uniprotkb": "Calcium-dependent protein kinase 18; 2.7.11.1", "protein_names_refseq": "calcium-dependent protein kinase 18", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G36070)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "10617198;12068094;12805596;17147637;20466843;27862469", "class_list": "", "function": "May play a role in signal transduction pathways that involve calcium as a second messenger., [UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 3, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O65644", "ec_number_list": [ { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.3.2.27", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.2.27", "type": "external" }, { "id": "2.7.10.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.-", "type": "external" }, { "id": "3.1.4.46", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.4.46", "type": "external" }, { "id": "2.7.11.25", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.25", "type": "external" }, { "id": "2.7.11.22", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.22", "type": "external" }, { "id": "2.7.10.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.1", "type": "external" }, { "id": "2.7.11.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.-", "type": "external" }, { "id": "2.7.11.24", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.24", "type": "external" }, { "id": "2.7.12.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.1", "type": "external" }, { "id": "2.7.11.23", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.23", "type": "external" }, { "id": "2.7.12.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.2", "type": "external" }, { "id": "2.7.-.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.-.-", "type": "external" }, { "id": "3.1.26.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.26.-", "type": "external" }, { "id": "3.1.3.16", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.16", "type": "external" }, { "id": "2.7.11.34", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.34", "type": "external" }, { "id": "4.6.1.2", "url": "https://www.rhea-db.org/rhea/?query=ec:4.6.1.2", "type": "external" } ], "go_molecular_function": "GO:0009931 calcium-dependent protein serine/threonine kinase activity;GO:0005516 calmodulin binding;GO:0005524 ATP binding;GO:0005509 calcium ion binding;GO:0004683 calcium/calmodulin-dependent protein kinase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005886 plasma membrane;GO:0016020 membrane", "go_biological_process": "GO:0035556 intracellular signal transduction;GO:0051592 response to calcium ion", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q1PE17-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "F4JRR1-1", "uniprot_id": [ { "id": "COG2_ARATH", "url": "https://www.uniprot.org/uniprot/F4JRR1", "type": "external" } ], "mass": 84619.0, "length": 756, "protein_name": "Conserved oligomeric Golgi complex subunit 2", "gene_name": "COG2", "organism": "Arabidopsis", "refseq_name": "oligomeric golgi complex subunit-like protein", "refseq_ac": [ { "id": "NP_567710", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_567710", "type": "external" } ], "gene_names_uniprotkb": "COG2; F6I7.50", "gene_names_refseq": "F6I7.50; F6I7_50", "protein_names_uniprotkb": "Conserved oligomeric Golgi complex subunit 2; COG complex subunit 2; Component of oligomeric Golgi complex 2", "protein_names_refseq": "oligomeric golgi complex subunit-like protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G24840)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "10617198;14593172;22223895;23328941;25541219;27448097;27801942;27862469;30833711", "class_list": "", "function": "Required for normal Golgi morphology and function (By similarity). Ensures, when in complex with FPP3/VETH1 and FPP2/VETH2, the correct secondary cell wall (SCW) deposition pattern by recruiting exocyst components to cortical microtubules in xylem cells during secondary cell wall deposition (PubMed:25541219)., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 4, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9ASS9;Q9SZX4", "ec_number_list": [], "go_molecular_function": "GO:0042803 protein homodimerization activity", "go_cellular_component": "GO:0000139 Golgi membrane;GO:0005794 Golgi apparatus;GO:0031410 cytoplasmic vesicle;GO:0017119 Golgi transport complex;GO:0000325 plant-type vacuole", "go_biological_process": "GO:0015031 protein transport;GO:0007030 Golgi organization;GO:0060178 regulation of exocyst localization;GO:0006891 intra-Golgi vesicle-mediated transport", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "F4JRR1-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "P92960-1", "uniprot_id": [ { "id": "KAT3_ARATH", "url": "https://www.uniprot.org/uniprot/P92960", "type": "external" } ], "mass": 75598.0, "length": 662, "protein_name": "Potassium channel KAT3", "gene_name": "KAT3", "organism": "Arabidopsis", "refseq_name": "potassium channel protein", "refseq_ac": [ { "id": "NP_194991", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_194991", "type": "external" } ], "gene_names_uniprotkb": "KAT3; A. thaliana low-K+-tolerant 1; AKT4; ATKC1; AtLKT1; F4D11.150; F4D11_150; KC1", "gene_names_refseq": "A. thaliana low-K+-tolerant 1; ARABIDOPSIS THALIANA K+ RECTIFYING CHANNEL 1; ATKC1; AtLKT1; F4D11.150; F4D11_150; K+ INWARD RECTIFYING CHANNEL PROTEIN; KAT3; KC1; potassium channel in Arabidopsis thaliana 3", "protein_names_uniprotkb": "Potassium channel KAT3; AKT4; AtKC1; Potassium channel TKC", "protein_names_refseq": "potassium channel protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G32650)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "10617198;11500563;11904452;12678562;14593172;27002025;27862469", "class_list": "", "function": "Potassium channel., [UniProtKB, UniProtKB, UniProtKB]; Probable modulatory (alpha) subunit of inward-rectifying potassium channels. Could mediate potassium uptake from the soil solution by plant roots in association with AKT1., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 3, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0005249 voltage-gated potassium channel activity", "go_cellular_component": "GO:0005783 endoplasmic reticulum;GO:0005886 plasma membrane;GO:0034702 monoatomic ion channel complex;GO:0009507 chloroplast", "go_biological_process": "GO:0071805 potassium ion transmembrane transport;GO:0009624 response to nematode", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "P92960-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q03251-1", "uniprot_id": [ { "id": "RBG8_ARATH", "url": "https://www.uniprot.org/uniprot/Q03251", "type": "external" } ], "mass": 16579.0, "length": 169, "protein_name": "Glycine-rich RNA-binding protein 8", "gene_name": "RBG8; RBGA6", "organism": "Arabidopsis", "refseq_name": "cold, circadian rhythm, and RNA binding 1", "refseq_ac": [ { "id": "NP_195637", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_195637", "type": "external" } ], "gene_names_uniprotkb": "RBG8; RBGA6; ATGRP8; CCR1; GLYCINE-RICH PROTEIN 8; GR-RBP8; GRP8; SRBP2; T22F8.160; T22F8_160; and RNA binding 1; circadian rhythm; cold", "gene_names_refseq": "ATGRP8; CCR1; GLYCINE-RICH PROTEIN 8; GR-RBP8; GRP8; T22F8.160; T22F8_160; and RNA binding 1; circadian rhythm; cold; glycine-rich RNA-binding protein 8", "protein_names_uniprotkb": "Glycine-rich RNA-binding protein 8; AtGR-RBP8; AtGRP8; AtRBG8; AtSRBP2; Glycine-rich protein 8; Protein CCR1; Protein COLD, CIRCADIAN RHYTHM, AND RNA BINDING 1; Small RNA binding protein 2", "protein_names_refseq": "cold, circadian rhythm, and RNA binding 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G39260)", "pathway_count": 1, "publication_count": 30, "publication_id_list": "10617198;11809873;12535349;14593172;14756317;16207746;17450127;17951448;18987006;19245862;19376835;19423640;19527663;19672695;20009520;20733066;22074104;22440515;22631563;23042250;23328941;23572148;23660473;25561503;26091701;27862469;29167316;31812689;7513083;8448367", "class_list": "", "function": "Plays a role in RNA transcription or processing during stress. Binds RNAs and DNAs sequence with a preference to single-stranded nucleic acids. Involved in mRNA alternative splicing of numerous targets by modulating splice site selection. Negatively regulates the circadian oscillations of its own transcript as well as RBG7 transcript. Forms an interlocked post-transcriptional negative feedback loop with the RBG7 autoregulatory circuit. Both proteins negatively autoregulate and reciprocally crossregulate by binding to their pre-mRNAs and promoting unproductive splicing coupled to degradation via the NMD pathway. Target of the Pseudomonas syringae type III effector HopU1. Mediates cell-to-cell trafficking of RNA interference (RNAi) signals (small RNAs (sRNA), e.g. small interfering RNA (siRNA) and microRNA (miRNA)) which regulate growth and development, as well as responses to environmental inputs, including pathogen attack; can compromise zucchini yellow mosaic virus (ZYMV) and tobacco rattle virus (TRV) infections at the early stage (PubMed:31812689)., [UniProtKB, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 8, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A178UVJ6;B9DFJ8;Q94CB0", "ec_number_list": [], "go_molecular_function": "GO:0003729 mRNA binding;GO:0003727 single-stranded RNA binding;GO:0035198 miRNA binding;GO:0035197 siRNA binding;GO:0003723 RNA binding", "go_cellular_component": "GO:0005615 extracellular space;GO:0005634 nucleus;GO:0005730 nucleolus;GO:0005739 mitochondrion;GO:0005777 peroxisome", "go_biological_process": "GO:0009409 response to cold;GO:0010043 response to zinc ion;GO:0045087 innate immune response;GO:0006858 extracellular transport;GO:0050658 RNA transport", "synthesized_glycan_count": 0, "hit_score": 3.1, "record_id": "Q03251-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "P48000-1", "uniprot_id": [ { "id": "KNAT3_ARATH", "url": "https://www.uniprot.org/uniprot/P48000", "type": "external" } ], "mass": 47600.0, "length": 431, "protein_name": "Homeobox protein knotted-1-like 3", "gene_name": "KNAT3", "organism": "Arabidopsis", "refseq_name": "homeobox protein knotted-1-like 3", "refseq_ac": [ { "id": "NP_197904", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_197904", "type": "external" } ], "gene_names_uniprotkb": "KNAT3; F21J6.18; F21J6_18; KNAT3 HOMEOBOX PROTEIN; KNOTTED1-like homeobox gene 3", "gene_names_refseq": "F21J6.18; F21J6_18; KNAT3 HOMEOBOX PROTEIN; KNAT3; KNOTTED1-like homeobox gene 3", "protein_names_uniprotkb": "Homeobox protein knotted-1-like 3; Protein KNAT3", "protein_names_refseq": "homeobox protein knotted-1-like 3", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G25220)", "pathway_count": 1, "publication_count": 13, "publication_id_list": "11130714;14593172;15781858;18398054;18463617;20466843;23572148;23660473;27862469;28011693;28154133;30833711;9161040", "class_list": "", "function": "", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 1, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 1, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 1, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 1, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 0, "biomarker_type": "", "glycan_count": 1, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q8L839;Q8LDC1", "ec_number_list": [], "go_molecular_function": "GO:0003700 DNA-binding transcription factor activity;GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding;GO:0003677 DNA binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005829 cytosol", "go_biological_process": "GO:0006357 regulation of transcription by RNA polymerase II;GO:0071345 cellular response to cytokine stimulus;GO:0009416 response to light stimulus;GO:0009722 detection of cytokinin stimulus;GO:0006355 regulation of DNA-templated transcription", "synthesized_glycan_count": 0, "hit_score": 1.6, "record_id": "P48000-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0100000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q39129-1", "uniprot_id": [ { "id": "STR16_ARATH", "url": "https://www.uniprot.org/uniprot/Q39129", "type": "external" } ], "mass": 12676.0, "length": 120, "protein_name": "Thiosulfate sulfurtransferase 16, chloroplastic", "gene_name": "STR16", "organism": "Arabidopsis", "refseq_name": "sulfurtransferase protein 16", "refseq_ac": [ { "id": "NP_851278", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_851278", "type": "external" } ], "gene_names_uniprotkb": "STR16; K2A18.11; K2A18_11; sulfurtransferase protein 16", "gene_names_refseq": "K2A18.11; K2A18_11; STR16; sulfurtransferase protein 16", "protein_names_uniprotkb": "Thiosulfate sulfurtransferase 16, chloroplastic; 2.8.1.1; AtStr16; Rhodanese; Senescence-associated protein; Sulfurtransferase 16", "protein_names_refseq": "sulfurtransferase protein 16", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G66040)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "11130714;12482606;14593172;15181206;17088324;17408957;27862469;9679202", "class_list": "", "function": "Thought to act during the early stages of leaf senescence. Catalyzes the transfer of a sulfur ion from a donor to cyanide or to other thiol compounds. Substrate preference is thiosulfate > 3-mercaptopyruvate., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9FKX8", "ec_number_list": [ { "id": "2.8.1.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.8.1.1", "type": "external" }, { "id": "2.8.1.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.8.1.2", "type": "external" } ], "go_molecular_function": "GO:0004792 thiosulfate-cyanide sulfurtransferase activity", "go_cellular_component": "GO:0005829 cytosol;GO:0009507 chloroplast;GO:0009536 plastid", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "Q39129-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "P48622-1", "uniprot_id": [ { "id": "FAD3D_ARATH", "url": "https://www.uniprot.org/uniprot/P48622", "type": "external" } ], "mass": 50136.0, "length": 435, "protein_name": "Temperature-sensitive sn-2 acyl-lipid omega-3 desaturase (ferredoxin), chloroplastic", "gene_name": "FAD8", "organism": "Arabidopsis", "refseq_name": "fatty acid desaturase 8", "refseq_ac": [ { "id": "NP_196177", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_196177", "type": "external" } ], "gene_names_uniprotkb": "FAD8; AtFAD8; MOP10.12; MOP10_12; OMEGA-3 FATTY ACID DESATURASE; fatty acid desaturase 8", "gene_names_refseq": "AtFAD8; FAD8; MOP10.12; MOP10_12; OMEGA-3 FATTY ACID DESATURASE; fatty acid desaturase 8", "protein_names_uniprotkb": "Temperature-sensitive sn-2 acyl-lipid omega-3 desaturase (ferredoxin), chloroplastic; 1.14.19.35; Temperature-sensitive omega-3 fatty acid desaturase 8, chloroplastic", "protein_names_refseq": "fatty acid desaturase 8", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G05580)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "11130714;12232435;14593172;27862469;7846164;7972507;9330910", "class_list": "", "function": "Chloroplast omega-3 fatty acid desaturase introduces the third double bond in the biosynthesis of 16:3 and 18:3 fatty acids, important constituents of plant membranes. It is thought to use ferredoxin as an electron donor and to act on fatty acids esterified to galactolipids, sulfolipids and phosphatidylglycerol., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [ { "id": "1.14.19.35", "url": "https://www.rhea-db.org/rhea/?query=ec:1.14.19.35", "type": "external" } ], "go_molecular_function": "GO:0016491 oxidoreductase activity;GO:0102993 sn-2 acyl-lipid omega-3 desaturase (ferredoxin) activity;GO:0042389 omega-3 fatty acid desaturase activity;GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water", "go_cellular_component": "GO:0005886 plasma membrane;GO:0009507 chloroplast;GO:0009941 chloroplast envelope;GO:0031969 chloroplast membrane;GO:0016020 membrane", "go_biological_process": "GO:0006633 fatty acid biosynthetic process;GO:0009266 response to temperature stimulus;GO:0006636 unsaturated fatty acid biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "P48622-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q38873-1", "uniprot_id": [ { "id": "CDPK7_ARATH", "url": "https://www.uniprot.org/uniprot/Q38873", "type": "external" } ], "mass": 60310.0, "length": 535, "protein_name": "Calcium-dependent protein kinase 7", "gene_name": "CPK7", "organism": "Arabidopsis", "refseq_name": "calmodulin-domain protein kinase 7", "refseq_ac": [ { "id": "NP_568281", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_568281", "type": "external" } ], "gene_names_uniprotkb": "CPK7; F7K24.200", "gene_names_refseq": "CALMODULIN-DOMAIN PROTEIN KINASE 7; CPK7; calmodulin-domain protein kinase 7", "protein_names_uniprotkb": "Calcium-dependent protein kinase 7; 2.7.11.1; Calmodulin-domain protein kinase CDPK isoform 7", "protein_names_refseq": "calmodulin-domain protein kinase 7", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G12480)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "11130714;12068094;12805596;12913141;14593172;25561503;27419465;27862469;8756605", "class_list": "", "function": "May play a role in signal transduction pathways that involve calcium as a second messenger., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 5, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q56XF6", "ec_number_list": [ { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.3.2.27", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.2.27", "type": "external" }, { "id": "2.7.10.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.-", "type": "external" }, { "id": "3.1.4.46", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.4.46", "type": "external" }, { "id": "2.7.11.25", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.25", "type": "external" }, { "id": "2.7.11.22", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.22", "type": "external" }, { "id": "2.7.10.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.1", "type": "external" }, { "id": "2.7.11.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.-", "type": "external" }, { "id": "2.7.11.24", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.24", "type": "external" }, { "id": "2.7.12.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.1", "type": "external" }, { "id": "2.7.11.23", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.23", "type": "external" }, { "id": "2.7.12.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.2", "type": "external" }, { "id": "2.7.-.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.-.-", "type": "external" }, { "id": "3.1.26.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.26.-", "type": "external" }, { "id": "3.1.3.16", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.16", "type": "external" }, { "id": "2.7.11.34", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.34", "type": "external" }, { "id": "4.6.1.2", "url": "https://www.rhea-db.org/rhea/?query=ec:4.6.1.2", "type": "external" } ], "go_molecular_function": "GO:0009931 calcium-dependent protein serine/threonine kinase activity;GO:0005516 calmodulin binding;GO:0005524 ATP binding;GO:0005509 calcium ion binding;GO:0004683 calcium/calmodulin-dependent protein kinase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005886 plasma membrane;GO:0009536 plastid;GO:0016020 membrane", "go_biological_process": "GO:0035556 intracellular signal transduction", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "Q38873-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "P92959-1", "uniprot_id": [ { "id": "RK24_ARATH", "url": "https://www.uniprot.org/uniprot/P92959", "type": "external" } ], "mass": 21977.0, "length": 198, "protein_name": "Large ribosomal subunit protein uL24c", "gene_name": "RPL24", "organism": "Arabidopsis", "refseq_name": "Translation protein SH3-like family protein", "refseq_ac": [ { "id": "NP_851190", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_851190", "type": "external" } ], "gene_names_uniprotkb": "RPL24; MRB17.10; MRB17_10; SUPPRESSOR OF VARIEGATION 8; SVR8; plastid ribosomal protein L24", "gene_names_refseq": "MRB17.10; MRB17_10; RPL24; SUPPRESSOR OF VARIEGATION 8; SVR8; plastid ribosomal protein L24", "protein_names_uniprotkb": "Large ribosomal subunit protein uL24c; 50S ribosomal protein L24, chloroplastic; CL24; Protein SUPPRESSOR OF VARIEGATION 8", "protein_names_refseq": "Translation protein SH3-like family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G54600)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "11130714;14593172;21923745;22060019;22900828;27862469;36423343;9872454", "class_list": "", "function": "One of two assembly initiator proteins, it binds directly to the 5'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit (By similarity). Required for optimal plastid performance in terms of photosynthesis and growth. Required for the translation of plastid mRNAs. Plays a critical role in biosynthesis of thylakoid membrane proteins encoded by chloroplast genes (PubMed:22900828)., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9FIU4", "ec_number_list": [], "go_molecular_function": "GO:0003729 mRNA binding;GO:0019843 rRNA binding;GO:0003735 structural constituent of ribosome;GO:0003723 RNA binding", "go_cellular_component": "GO:0005739 mitochondrion;GO:0005840 ribosome;GO:1990904 ribonucleoprotein complex;GO:0009507 chloroplast;GO:0009536 plastid", "go_biological_process": "GO:0006412 translation;GO:0032544 plastid translation", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "P92959-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "F4K5T4-1", "uniprot_id": [ { "id": "STKLU_ARATH", "url": "https://www.uniprot.org/uniprot/F4K5T4", "type": "external" } ], "mass": 46906.0, "length": 427, "protein_name": "Probable transcription factor At5g28040", "gene_name": "F15F15.110", "organism": "Arabidopsis", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "F15F15.110", "gene_names_refseq": "", "protein_names_uniprotkb": "Probable transcription factor At5g28040; Storekeeper-like protein At5g28040", "protein_names_refseq": "", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G28040)", "pathway_count": 1, "publication_count": 19, "publication_id_list": "11130714;11910074;12535344;14593172;18463617;19245862;19376835;20466843;21768351;22440515;23328941;23572148;23660473;23776212;25561503;26091701;27862469;28154133;30833711", "class_list": "", "function": "", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 5, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 5, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 5, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 1, "reported_phosphosites": 3, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 0, "biomarker_type": "", "glycan_count": 1, "disease_count": 0, "glyco_site_count": 4, "binding_glycan_count": 0, "secondary_ac_list": "Q8GXW7", "ec_number_list": [], "go_molecular_function": "GO:0000976 transcription cis-regulatory region binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006355 regulation of DNA-templated transcription;GO:0042742 defense response to bacterium", "synthesized_glycan_count": 0, "hit_score": 2.6, "record_id": "F4K5T4-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0100000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "P98205-1", "uniprot_id": [ { "id": "ALA2_ARATH", "url": "https://www.uniprot.org/uniprot/P98205", "type": "external" } ], "mass": 124836.0, "length": 1107, "protein_name": "Phospholipid-transporting ATPase 2", "gene_name": "ALA2", "organism": "Arabidopsis", "refseq_name": "aminophospholipid ATPase 2", "refseq_ac": [ { "id": "NP_001190471", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001190471", "type": "external" } ], "gene_names_uniprotkb": "ALA2; MLN1.17; MLN1_17; aminophospholipid ATPase 2", "gene_names_refseq": "ALA2; MLN1.17; MLN1_17; aminophospholipid ATPase 2", "protein_names_uniprotkb": "Phospholipid-transporting ATPase 2; 7.6.2.1; Aminophospholipid ATPase 2; Aminophospholipid flippase 2; AtALA2", "protein_names_refseq": "aminophospholipid ATPase 2", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G44240)", "pathway_count": 1, "publication_count": 18, "publication_id_list": "11130714;11402198;14593172;18463617;19245862;19376835;20053675;20374526;20466843;21768351;23111157;23660473;25561503;26091701;27419465;27862469;28011693;9330910", "class_list": "", "function": "Involved in transport of phospholipids. Contributes to transmembrane flipping of lipids. Requires an interaction with a protein of the ALIS family for activity. Specific for phosphatidylserine and has no activity with lysolipid, phosphatidylcholine or phosphatidylethanolamine., [UniProtKB, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 10, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "Q84ME2;Q8W567", "ec_number_list": [], "go_molecular_function": "GO:0000287 magnesium ion binding;GO:0005524 ATP binding;GO:0016887 ATP hydrolysis activity;GO:0140326 ATPase-coupled intramembrane lipid transporter activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005768 endosome;GO:0005794 Golgi apparatus;GO:0005886 plasma membrane;GO:0005789 endoplasmic reticulum membrane", "go_biological_process": "GO:0045332 phospholipid translocation;GO:0015914 phospholipid transport", "synthesized_glycan_count": 0, "hit_score": 1.9, "record_id": "P98205-1", "record_type": "protein", "filter_code": "0000000.0100101.010000.100000000000000000.0000000001001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1PDW5-1", "uniprot_id": [ { "id": "FTSH6_ARATH", "url": "https://www.uniprot.org/uniprot/Q1PDW5", "type": "external" } ], "mass": 74515.0, "length": 688, "protein_name": "ATP-dependent zinc metalloprotease FTSH 6, chloroplastic", "gene_name": "FTSH6", "organism": "Arabidopsis", "refseq_name": "FTSH protease 6", "refseq_ac": [ { "id": "NP_568311", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_568311", "type": "external" } ], "gene_names_uniprotkb": "FTSH6; ATFTSH6; F8M21.140; F8M21_140; FTSH protease 6", "gene_names_refseq": "ATFTSH6; F8M21.140; F8M21_140; FTSH protease 6; FTSH6", "protein_names_uniprotkb": "ATP-dependent zinc metalloprotease FTSH 6, chloroplastic; 3.4.24.-; AtFTSH6", "protein_names_refseq": "FTSH protease 6", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G15250)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "11130714;11299370;11717304;14630971;14996218;16157880;17147637;27862469", "class_list": "", "function": "Probable ATP-dependent zinc metallopeptidase. Involved in the degradation of the light-harvesting complex of photosystem II (LHC II) during senescence or high light acclimation., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9LXF7", "ec_number_list": [], "go_molecular_function": "GO:0004222 metalloendopeptidase activity;GO:0005524 ATP binding;GO:0008270 zinc ion binding;GO:0016887 ATP hydrolysis activity;GO:0008233 peptidase activity", "go_cellular_component": "GO:0009535 chloroplast thylakoid membrane;GO:0009507 chloroplast", "go_biological_process": "GO:0006508 proteolysis;GO:0010304 PSII associated light-harvesting complex II catabolic process", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "Q1PDW5-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q0WSX8-1", "uniprot_id": [ { "id": "TIK_ARATH", "url": "https://www.uniprot.org/uniprot/Q0WSX8", "type": "external" } ], "mass": 29699.0, "length": 255, "protein_name": "TIR domain-containing protein", "gene_name": "TIK", "organism": "Arabidopsis", "refseq_name": "Toll-Interleukin-Resistance (TIR) domain family protein", "refseq_ac": [ { "id": "NP_851131", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_851131", "type": "external" } ], "gene_names_uniprotkb": "TIK; AtTIK; K21C13.10; K21C13_10; TIR-KASH protein", "gene_names_refseq": "AtTIK; K21C13.10; K21C13_10; TIK; TIR-KASH protein", "protein_names_uniprotkb": "TIR domain-containing protein; 3.2.2.6; AtTIK; TIR-KASH protein", "protein_names_refseq": "Toll-Interleukin-Resistance (TIR) domain family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G44920)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "11130714;23111157;25217773;25740919;27862469;9679202", "class_list": "", "function": "Could play a role in nuclear morphology, specifically nuclear size., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9FLA6", "ec_number_list": [ { "id": "3.2.2.6", "url": "https://www.rhea-db.org/rhea/?query=ec:3.2.2.6", "type": "external" }, { "id": "3.2.2.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.2.2.-", "type": "external" } ], "go_molecular_function": "GO:0061809 NAD+ nucleosidase activity, cyclic ADP-ribose generating", "go_cellular_component": "GO:0005634 nucleus;GO:0005635 nuclear envelope;GO:0005737 cytoplasm;GO:0005783 endoplasmic reticulum;GO:0031965 nuclear membrane", "go_biological_process": "GO:0006952 defense response;GO:0007165 signal transduction", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q0WSX8-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "F4KGE8-1", "uniprot_id": [ { "id": "GIL1_ARATH", "url": "https://www.uniprot.org/uniprot/F4KGE8", "type": "external" } ], "mass": 62843.0, "length": 559, "protein_name": "Protein GRAVITROPIC IN THE LIGHT 1", "gene_name": "GIL1", "organism": "Arabidopsis", "refseq_name": "glucose-6-phosphate isomerase, putative (DUF641)", "refseq_ac": [ { "id": "NP_001032100", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001032100", "type": "external" } ], "gene_names_uniprotkb": "GIL1; K19M22.15", "gene_names_refseq": "GIL1; GRAVITROPIC IN THE LIGHT; K19M22.15; K19M22_15", "protein_names_uniprotkb": "Protein GRAVITROPIC IN THE LIGHT 1", "protein_names_refseq": "glucose-6-phosphate isomerase, putative (DUF641)", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G58960)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "10048488;11910074;14593172;15618632;16640600;19423640;23111157;27862469", "class_list": "", "function": "Required for red (R) and far red (FR) light-induced and phytochrome-mediated deregulation of negative gravitropism leading to randomization of hypocotyl growth orientation., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 3, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q8GWZ0;Q9FIL5", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "GO:0009639 response to red or far red light;GO:0009959 negative gravitropism", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "F4KGE8-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "P46667-1", "uniprot_id": [ { "id": "ATHB5_ARATH", "url": "https://www.uniprot.org/uniprot/P46667", "type": "external" } ], "mass": 34791.0, "length": 312, "protein_name": "Homeobox-leucine zipper protein ATHB-5", "gene_name": "ATHB-5; HB5", "organism": "Arabidopsis", "refseq_name": "homeobox protein 5", "refseq_ac": [ { "id": "NP_201334", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_201334", "type": "external" } ], "gene_names_uniprotkb": "ATHB-5; HB5; ATHB-5; ATHB5; MNA5.4; MNA5_4; homeobox protein 5", "gene_names_refseq": "ATHB-5; ATHB5; HB5; MNA5.4; MNA5_4; homeobox protein 5", "protein_names_uniprotkb": "Homeobox-leucine zipper protein ATHB-5; HD-ZIP protein ATHB-5; Homeodomain transcription factor ATHB-5", "protein_names_refseq": "homeobox protein 5", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G65310)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "11130714;11247607;12678559;14593172;16055682;27862469;7948864;9679202", "class_list": "", "function": "Probable transcription factor that acts as a positive regulator of ABA-responsiveness, mediating the inhibitory effect of ABA on growth during seedling establishment. Binds to the DNA sequence 5'-CAATNATTG-3'., [UniProtKB, PubMed]; Transcription factor., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0003700 DNA-binding transcription factor activity;GO:0042803 protein homodimerization activity;GO:0000976 transcription cis-regulatory region binding;GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific;GO:0043565 sequence-specific DNA binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0045893 positive regulation of DNA-templated transcription;GO:0009737 response to abscisic acid;GO:0009738 abscisic acid-activated signaling pathway", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "P46667-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "P92941-1", "uniprot_id": [ { "id": "CLCA_ARATH", "url": "https://www.uniprot.org/uniprot/P92941", "type": "external" } ], "mass": 85406.0, "length": 775, "protein_name": "Chloride channel protein CLC-a", "gene_name": "CLC-A", "organism": "Arabidopsis", "refseq_name": "chloride channel A", "refseq_ac": [ { "id": "NP_198905", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_198905", "type": "external" } ], "gene_names_uniprotkb": "CLC-A; ATCLC-A; ATCLCA; CBSCLC5; CHLORIDE CHANNEL A; CHLORIDE CHANNEL-A; CLCA; MHK7.12; chloride channel A", "gene_names_refseq": "ATCLC-A; ATCLCA; CHLORIDE CHANNEL A; CHLORIDE CHANNEL-A; CLC-A; CLCA; chloride channel A", "protein_names_uniprotkb": "Chloride channel protein CLC-a; AtCLC-a; CBS domain-containing protein CBSCLC5", "protein_names_refseq": "chloride channel A", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G40890)", "pathway_count": 1, "publication_count": 21, "publication_id_list": "10758477;11130714;14593172;18686298;19245862;19376835;19400948;21768351;23172892;23328941;23572148;23660473;23776212;25005229;25561503;26091701;27676158;27862469;28011693;8969232;9679202", "class_list": "", "function": "Voltage-gated chloride channel that could play a role in the regulation of nitrate content., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 4, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O64990;Q93YS0", "ec_number_list": [], "go_molecular_function": "GO:0005247 voltage-gated chloride channel activity;GO:0015112 nitrate transmembrane transporter activity;GO:0009671 nitrate:proton symporter activity", "go_cellular_component": "GO:0005634 nucleus;GO:0034707 chloride channel complex;GO:0009705 plant-type vacuole membrane", "go_biological_process": "GO:0006821 chloride transport;GO:0015706 nitrate transmembrane transport;GO:0010167 response to nitrate", "synthesized_glycan_count": 0, "hit_score": 2.2, "record_id": "P92941-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q0WW55-1", "uniprot_id": [ { "id": "ZEUS1_ARATH", "url": "https://www.uniprot.org/uniprot/Q0WW55", "type": "external" } ], "mass": 29550.0, "length": 263, "protein_name": "Thymidylate kinase", "gene_name": "ZEU1", "organism": "Arabidopsis", "refseq_name": "P-loop containing nucleoside triphosphate hydrolases superfamily protein", "refseq_ac": [ { "id": "NP_568907", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_568907", "type": "external" } ], "gene_names_uniprotkb": "ZEU1; ATTMPK.1; ATTMPK.2; F2O15.12; F2O15_12; ZEUS1", "gene_names_refseq": "ARABIDOPSIS THALIANA THYMIDYLATE KINASE.1; ARABIDOPSIS THALIANA THYMIDYLATE KINASE.2; ATTMPK.1; ATTMPK.2; F2O15.12; F2O15_12; ZEU1; ZEUS1", "protein_names_uniprotkb": "Thymidylate kinase; 2.7.4.9; AtTMPK; Protein ZEUS1", "protein_names_refseq": "P-loop containing nucleoside triphosphate hydrolases superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G59440)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "11130714;14593172;18036198;27862469", "class_list": "", "function": "Catalyzes the conversion of dTMP to dTDP (Probable). Involved in the regulation of DNA replication. Is essential to promote the first division of the zygote (PubMed:18036198)., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0NAB2;A2P2R9;Q8LEB4;Q93ZP0", "ec_number_list": [ { "id": "2.7.4.9", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.4.9", "type": "external" } ], "go_molecular_function": "GO:0005524 ATP binding;GO:0004798 dTMP kinase activity;GO:0004550 nucleoside diphosphate kinase activity;GO:0016787 hydrolase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005654 nucleoplasm;GO:0005737 cytoplasm;GO:0005739 mitochondrion;GO:0009507 chloroplast", "go_biological_process": "GO:0006233 dTDP biosynthetic process;GO:0006227 dUDP biosynthetic process;GO:0006235 dTTP biosynthetic process;GO:0009793 embryo development ending in seed dormancy", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "Q0WW55-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "O04027-1", "uniprot_id": [ { "id": "NFYB4_ARATH", "url": "https://www.uniprot.org/uniprot/O04027", "type": "external" } ], "mass": 15741.0, "length": 139, "protein_name": "Nuclear transcription factor Y subunit B-4", "gene_name": "NFYB4", "organism": "Arabidopsis", "refseq_name": "nuclear factor Y, subunit B4", "refseq_ac": [ { "id": "NP_172377", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_172377", "type": "external" } ], "gene_names_uniprotkb": "NFYB4; F7G19.10; HAP3D", "gene_names_refseq": "''nuclear factor Y; F7G19.10; F7G19_10; NF-YB4; nuclear factor Y; subunit B4''; subunit B4", "protein_names_uniprotkb": "Nuclear transcription factor Y subunit B-4; AtNF-YB-4; Transcriptional activator HAP3D", "protein_names_refseq": "nuclear factor Y, subunit B4", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G09030)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "11130712;11250072;11867211;27862469", "class_list": "", "function": "Component of the NF-Y/HAP transcription factor complex. 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FCAALL.138", "gene_names_refseq": "DL3050C; FCAALL.138", "protein_names_uniprotkb": "Rapid alkalinization factor (RALF) family protein", "protein_names_refseq": "Rapid alkalinization factor (RALF) family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G14020)", "pathway_count": 1, "publication_count": 3, "publication_id_list": "10617198;23111157;27862469", "class_list": "", "function": "", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0005179 hormone activity", "go_cellular_component": "GO:0005576 extracellular region;GO:0005634 nucleus", "go_biological_process": "GO:0019722 calcium-mediated signaling;GO:0040008 regulation of growth", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "O23263-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "O23338-1", "uniprot_id": [ { "id": "O23338_ARATH", "url": "https://www.uniprot.org/uniprot/O23338", "type": "external" } ], "mass": 16935.0, "length": 152, "protein_name": "17.6 kDa class II heat shock protein", "gene_name": "HSP1", "organism": "Arabidopsis", "refseq_name": "17.6 kDa class II heat shock protein", "refseq_ac": [ { "id": "NP_193219", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_193219", "type": "external" } ], "gene_names_uniprotkb": "HSP1; 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F19I3.24; F19I3_24; TO1; thioredoxin O1", "protein_names_uniprotkb": "Thioredoxin O1, mitochondrial; AtTrxo1", "protein_names_refseq": "thioredoxin O1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G35010)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "10617197;11717467;11910074;19825616;27862469", "class_list": "", "function": "Thiol-disulfide oxidoreductase that may participate in various redox reactions. Possesses insulin disulfide bonds reducing activity. Reduced by thioredoxin reductases NTRA and NTRB., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q8GW51", "ec_number_list": [], "go_molecular_function": "GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor", "go_cellular_component": "GO:0005739 mitochondrion;GO:0005759 mitochondrial matrix;GO:0005783 endoplasmic reticulum;GO:0005829 cytosol;GO:0009507 chloroplast", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "O64764-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "O65685-1", "uniprot_id": [ { "id": "BLH6_ARATH", "url": "https://www.uniprot.org/uniprot/O65685", "type": "external" } ], "mass": 59609.0, "length": 532, "protein_name": "BEL1-like homeodomain protein 6", "gene_name": "BLH6", "organism": "Arabidopsis", "refseq_name": "BEL1-like homeodomain 6", "refseq_ac": [ { "id": "NP_001119116", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001119116", "type": "external" } ], "gene_names_uniprotkb": "BLH6; T4L20.190", "gene_names_refseq": "BEL1-like homeodomain 6; BLH6; T4L20.190; T4L20_190", "protein_names_uniprotkb": "BEL1-like homeodomain protein 6; BEL1-like protein 6", "protein_names_refseq": "BEL1-like homeodomain 6", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G34610)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "10617198;15120075;15781858;27862469", "class_list": "", "function": "", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0003700 DNA-binding transcription factor activity;GO:0000976 transcription cis-regulatory region binding;GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006357 regulation of transcription by RNA polymerase II", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "O65685-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "O80654-1", "uniprot_id": [ { "id": "ERF37_ARATH", "url": "https://www.uniprot.org/uniprot/O80654", "type": "external" } ], "mass": 26729.0, "length": 244, "protein_name": "Ethylene-responsive transcription factor ERF037", "gene_name": "ERF037", "organism": "Arabidopsis", "refseq_name": "Integrase-type DNA-binding superfamily protein", "refseq_ac": [ { "id": "NP_177844", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_177844", "type": "external" } ], "gene_names_uniprotkb": "ERF037; T14N5.6", "gene_names_refseq": "T14N5.6; T14N5_6", "protein_names_uniprotkb": "Ethylene-responsive transcription factor ERF037", "protein_names_refseq": "Integrase-type DNA-binding superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G77200)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "11130712;16407444;17147637;23820729;27862469", "class_list": "", "function": "Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity)., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0MEG8", "ec_number_list": [], "go_molecular_function": "GO:0003677 DNA binding;GO:0003700 DNA-binding transcription factor activity", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0009873 ethylene-activated signaling pathway", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "O80654-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "O82248-1", "uniprot_id": [ { "id": "NFYB5_ARATH", "url": "https://www.uniprot.org/uniprot/O82248", "type": "external" } ], "mass": 18122.0, "length": 160, "protein_name": "Nuclear transcription factor Y subunit B-5", "gene_name": "NFYB5", "organism": "Arabidopsis", "refseq_name": "nuclear factor Y, subunit B5", "refseq_ac": [ { "id": "NP_182302", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_182302", "type": "external" } ], "gene_names_uniprotkb": "NFYB5; F17A22.20", "gene_names_refseq": "''nuclear factor Y; F17A22.20; NF-YB5; nuclear factor Y; subunit B5''; subunit B5", "protein_names_uniprotkb": "Nuclear transcription factor Y subunit B-5; AtNF-YB-5", "protein_names_refseq": "nuclear factor Y, subunit B5", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G47810)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "10617197;11250072;11867211;14593172;27862469", "class_list": "", "function": "Component of the NF-Y/HAP transcription factor complex. The NF-Y complex stimulates the transcription of various genes by recognizing and binding to a CCAAT motif in promoters., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0003700 DNA-binding transcription factor activity;GO:0046982 protein heterodimerization activity;GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific;GO:0043565 sequence-specific DNA binding;GO:0001228 DNA-binding transcription activator activity, RNA polymerase II-specific", "go_cellular_component": "GO:0005634 nucleus;GO:0016602 CCAAT-binding factor complex", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006357 regulation of transcription by RNA polymerase II", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "O82248-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "O82255-1", "uniprot_id": [ { "id": "GRC13_ARATH", "url": "https://www.uniprot.org/uniprot/O82255", "type": "external" } ], "mass": 11275.0, "length": 102, "protein_name": "Glutaredoxin-C13", "gene_name": "GRXC13", "organism": "Arabidopsis", "refseq_name": "Glutaredoxin family protein", "refseq_ac": [ { "id": "NP_182309", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_182309", "type": "external" } ], "gene_names_uniprotkb": "GRXC13; F17A22.27; ROXY9; T9J23.13", "gene_names_refseq": "T9J23.13", "protein_names_uniprotkb": "Glutaredoxin-C13; AtGrxC13; Protein ROXY 9", "protein_names_refseq": "Glutaredoxin family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G47880)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "10617197;15170506;16720602;19218396;27862469", "class_list": "", "function": "Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins (By similarity)., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "C1JGQ0", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm", "go_biological_process": "GO:0006995 cellular response to nitrogen starvation", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "O82255-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "O82799-1", "uniprot_id": [ { "id": "NGA1_ARATH", "url": "https://www.uniprot.org/uniprot/O82799", "type": "external" } ], "mass": 34890.0, "length": 310, "protein_name": "B3 domain-containing transcription factor NGA1", "gene_name": "NGA1", "organism": "Arabidopsis", "refseq_name": "AP2/B3-like transcriptional factor family protein", "refseq_ac": [ { "id": "NP_566089", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_566089", "type": "external" } ], "gene_names_uniprotkb": "NGA1; F19D11.25", "gene_names_refseq": "F19D11.25; NGA1; NGATHA1", "protein_names_uniprotkb": "B3 domain-containing transcription factor NGA1; Protein NGATHA 1", "protein_names_refseq": "AP2/B3-like transcriptional factor family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G46870)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "10617197;11910074;14593172;16603651;18986826;19465596;27402171;27862469;28154133", "class_list": "", "function": "Regulates lateral organ growth. Functionally redundant with NGA2, NGA3 and NGA4., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 1, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 1, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 1, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 1, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 0, "biomarker_type": "", "glycan_count": 1, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0003700 DNA-binding transcription factor activity;GO:0043565 sequence-specific DNA binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0009908 flower development;GO:0048366 leaf development;GO:1901371 regulation of leaf morphogenesis;GO:0048480 stigma development", "synthesized_glycan_count": 0, "hit_score": 1.2, "record_id": "O82799-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0100000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "P0DI12-1", "uniprot_id": [ { "id": "SA1B1_ARATH", "url": "https://www.uniprot.org/uniprot/P0DI12", "type": "external" } ], "mass": 35655.0, "length": 320, "protein_name": "SUMO-activating enzyme subunit 1B-1", "gene_name": "SAE1B-1", "organism": "Arabidopsis", "refseq_name": "SUMO-activating enzyme 1B", "refseq_ac": [ { "id": "NP_568732", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_568732", "type": "external" } ], "gene_names_uniprotkb": "SAE1B-1; MBA10.22; SAE1-2", "gene_names_refseq": "AT-SAE1-2; MBA10.22; MBA10_22; SAE1B; SUMO-activating enzyme 1B", "protein_names_uniprotkb": "SUMO-activating enzyme subunit 1B-1; SUMO-activating enzyme subunit 1-2; Ubiquitin-like 1-activating enzyme E1A", "protein_names_refseq": "SUMO-activating enzyme 1B", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G50580); (ath:AT5G50680)", "pathway_count": 2, "publication_count": 5, "publication_id_list": "12482876;14593172;17644626;22223895;27862469", "class_list": "", "function": "The dimeric enzyme acts as an E1 ligase for SUMO1 and SUMO2. It mediates ATP-dependent activation of SUMO proteins and formation of a thioester with a conserved cysteine residue on SAE2. Functionally redundant with its paralog SAE1A., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q8LCB9;Q8LKN3;Q9LUF3", "ec_number_list": [], "go_molecular_function": "GO:0019948 SUMO activating enzyme activity", "go_cellular_component": "GO:0031510 SUMO activating enzyme complex;GO:0005634 nucleus;GO:0005737 cytoplasm", "go_biological_process": "GO:0016925 protein sumoylation", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "P0DI12-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "P16972-1", "uniprot_id": [ { "id": "FER2_ARATH", "url": "https://www.uniprot.org/uniprot/P16972", "type": "external" } ], "mass": 15539.0, "length": 148, "protein_name": "Ferredoxin-2, chloroplastic", "gene_name": "FD2", "organism": "Arabidopsis", "refseq_name": "2Fe-2S ferredoxin-like superfamily protein", "refseq_ac": [ { "id": "NP_176291", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_176291", "type": "external" } ], "gene_names_uniprotkb": "FD2; PETF1; PETF; T7P1.9", "gene_names_refseq": "ATFD2; FD2; FED A; FERREDOXIN 2; FERRODOXIN A", "protein_names_uniprotkb": "Ferredoxin-2, chloroplastic; AtFd2", "protein_names_refseq": "2Fe-2S ferredoxin-like superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G60950)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "11130712;14593172;14684843;16667505;18243102;2102830;27862469", "class_list": "", "function": "Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q0WWH2", "ec_number_list": [], "go_molecular_function": "GO:0009055 electron transfer activity;GO:0046872 metal ion binding;GO:0051537 2 iron, 2 sulfur cluster binding", "go_cellular_component": "GO:0009507 chloroplast;GO:0009570 chloroplast stroma", "go_biological_process": "GO:0009416 response to light stimulus;GO:0009643 photosynthetic acclimation;GO:0009767 photosynthetic electron transport chain", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "P16972-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "P25269-1", "uniprot_id": [ { "id": "TRBP2_ARATH", "url": "https://www.uniprot.org/uniprot/P25269", "type": "external" } ], "mass": 51601.0, "length": 475, "protein_name": "Tryptophan synthase beta chain 2, chloroplastic", "gene_name": "TSB2", "organism": "Arabidopsis", "refseq_name": "tryptophan synthase beta-subunit 2", "refseq_ac": [ { "id": "NP_194437", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_194437", "type": "external" } ], "gene_names_uniprotkb": "TSB2; T24A18.20", "gene_names_refseq": "T24A18.20; T24A18_20; TRYPTOPHAN SYNTHASE BETA-SUBUNIT; TSB2; tryptophan synthase beta-subunit 2", "protein_names_uniprotkb": "Tryptophan synthase beta chain 2, chloroplastic; 4.2.1.20", "protein_names_refseq": "tryptophan synthase beta-subunit 2", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G27070)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "10617198;14593172;1840915;22223895;27862469", "class_list": "", "function": "The beta subunit is responsible for the synthesis of L-tryptophan from indole and L-serine., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [ { "id": "4.2.1.20", "url": "https://www.rhea-db.org/rhea/?query=ec:4.2.1.20", "type": "external" }, { "id": "4.1.2.8", "url": "https://www.rhea-db.org/rhea/?query=ec:4.1.2.8", "type": "external" } ], "go_molecular_function": "GO:0004834 tryptophan synthase activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0009507 chloroplast;GO:0009570 chloroplast stroma;GO:0009941 chloroplast envelope", "go_biological_process": "GO:0000162 L-tryptophan biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "P25269-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "P46601-1", "uniprot_id": [ { "id": "HAT2_ARATH", "url": "https://www.uniprot.org/uniprot/P46601", "type": "external" } ], "mass": 31727.0, "length": 283, "protein_name": "Homeobox-leucine zipper protein HAT2", "gene_name": "HAT2", "organism": "Arabidopsis", "refseq_name": "Homeobox-leucine zipper protein 4 (HB-4) / HD-ZIP protein", "refseq_ac": [ { "id": "NP_199548", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_199548", "type": "external" } ], "gene_names_uniprotkb": "HAT2; MQL5.23", "gene_names_refseq": "HAT2; MQL5.23; MQL5_23", "protein_names_uniprotkb": "Homeobox-leucine zipper protein HAT2; HD-ZIP protein 2; Homeodomain-leucine zipper protein HAT2", "protein_names_refseq": "Homeobox-leucine zipper protein 4 (HB-4) / HD-ZIP protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G47370)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "10718197;12492842;14593172;16055682;24302889;25561503;27862469;7915839", "class_list": "", "function": "Probable transcription factor that plays a role in auxin-mediated morphogenesis. Negatively regulates lateral root elongation., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q546H4;Q9LVS2", "ec_number_list": [], "go_molecular_function": "GO:0003677 DNA binding;GO:0003700 DNA-binding transcription factor activity;GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific;GO:0043565 sequence-specific DNA binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0045892 negative regulation of DNA-templated transcription;GO:0009826 unidimensional cell growth;GO:0009641 shade avoidance;GO:0009733 response to auxin", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "P46601-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "P46603-1", "uniprot_id": [ { "id": "HAT9_ARATH", "url": "https://www.uniprot.org/uniprot/P46603", "type": "external" } ], "mass": 29878.0, "length": 274, "protein_name": "Homeobox-leucine zipper protein HAT9", "gene_name": "HAT9", "organism": "Arabidopsis", "refseq_name": "Homeobox-leucine zipper protein family", "refseq_ac": [ { "id": "NP_179865", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_179865", "type": "external" } ], "gene_names_uniprotkb": "HAT9; T20K9.1; T30L20.6", "gene_names_refseq": "HAT9; T30L20.6; TRANSCRIPTION FACTOR HAT9", "protein_names_uniprotkb": "Homeobox-leucine zipper protein HAT9; HD-ZIP protein 9; Homeodomain-leucine zipper protein HAT9", "protein_names_refseq": "Homeobox-leucine zipper protein family", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G22800)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "10617197;16055682;27862469;7915839", "class_list": "", "function": "Probable transcription factor., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O82763;Q0WP63", "ec_number_list": [], "go_molecular_function": "GO:0003700 DNA-binding transcription factor activity;GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific;GO:0043565 sequence-specific DNA binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "P46603-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "P46604-1", "uniprot_id": [ { "id": "HAT22_ARATH", "url": "https://www.uniprot.org/uniprot/P46604", "type": "external" } ], "mass": 30730.0, "length": 278, "protein_name": "Homeobox-leucine zipper protein HAT22", "gene_name": "HAT22", "organism": "Arabidopsis", "refseq_name": "Homeobox-leucine zipper protein family", "refseq_ac": [ { "id": "NP_195493", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_195493", "type": "external" } ], "gene_names_uniprotkb": "HAT22; T28I19.70", "gene_names_refseq": "HAT22; HOMEOBOX PROTEIN; T28I19.70; T28I19_70", "protein_names_uniprotkb": "Homeobox-leucine zipper protein HAT22; HD-ZIP protein 22; Homeodomain-leucine zipper protein HAT22", "protein_names_refseq": "Homeobox-leucine zipper protein family", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G37790)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "10617198;1349174;14593172;16055682;19245862;25561503;27862469;7915839", "class_list": "", "function": "Probable transcription factor., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q546G6", "ec_number_list": [], "go_molecular_function": "GO:0003700 DNA-binding transcription factor activity;GO:0000976 transcription cis-regulatory region binding;GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific;GO:0001217 DNA-binding transcription repressor activity", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0009414 response to water deprivation;GO:0009735 response to cytokinin;GO:0009737 response to abscisic acid;GO:0009738 abscisic acid-activated signaling pathway", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "P46604-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "P46637-1", "uniprot_id": [ { "id": "ARGI1_ARATH", "url": "https://www.uniprot.org/uniprot/P46637", "type": "external" } ], "mass": 37345.0, "length": 342, "protein_name": "Arginase 1, mitochondrial", "gene_name": "ARGAH1", "organism": "Arabidopsis", "refseq_name": "arginase", "refseq_ac": [ { "id": "NP_192629", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_192629", "type": "external" } ], "gene_names_uniprotkb": "ARGAH1; T3H13.7", "gene_names_refseq": "ARGAH1; arginine amidohydrolase 1", "protein_names_uniprotkb": "Arginase 1, mitochondrial; 3.5.3.11; 3.5.3.1; Agmatinase ARGAH1; Arginine amidohydrolase 1; AtARGAH1", "protein_names_refseq": "arginase", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G08900)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "10617198;14593172;18425591;18567826;25732537;27862469;28716421;32754173;7770544", "class_list": "", "function": "Catalyzes the hydrolysis of L-arginine to urea and L-ornithine (Probable). The latter can be utilized in the urea cycle or as a precursor for the synthesis of both polyamines and proline (Probable). Possesses agmatinase activity. Catalyzes the formation of putrescine from agmatine (PubMed:28716421)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [ { "id": "3.5.3.1", "url": "https://www.rhea-db.org/rhea/?query=ec:3.5.3.1", "type": "external" }, { "id": "3.5.3.11", "url": "https://www.rhea-db.org/rhea/?query=ec:3.5.3.11", "type": "external" } ], "go_molecular_function": "GO:0000287 magnesium ion binding;GO:0004053 arginase activity;GO:0050897 cobalt ion binding;GO:0008783 agmatinase activity", "go_cellular_component": "GO:0005739 mitochondrion;GO:0005829 cytosol", "go_biological_process": "GO:0000050 urea cycle;GO:0006527 L-arginine catabolic process;GO:0034214 protein hexamerization;GO:0033389 putrescine biosynthetic process from arginine, via agmatine", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "P46637-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "P46643-1", "uniprot_id": [ { "id": "AAT1_ARATH", "url": "https://www.uniprot.org/uniprot/P46643", "type": "external" } ], "mass": 47758.0, "length": 430, "protein_name": "Aspartate aminotransferase, mitochondrial", "gene_name": "ASP1", "organism": "Arabidopsis", "refseq_name": "aspartate aminotransferase 1", "refseq_ac": [ { "id": "NP_001118421", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001118421", "type": "external" } ], "gene_names_uniprotkb": "ASP1; F7F1.18", "gene_names_refseq": "ASP1; ASPARTATE AMINOTRANSFERASE 1; F7F1.18; F7F1_18; aspartate aminotransferase 1", "protein_names_uniprotkb": "Aspartate aminotransferase, mitochondrial; 2.6.1.1; Transaminase A", "protein_names_refseq": "aspartate aminotransferase 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G30970)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "10617197;14593172;14671022;18318836;27862469;7894512;9535706;9611168", "class_list": "", "function": "Amino acid aminotransferase important for the metabolism of amino acids and Krebs-cycle related organic acids. No activity with D-Asp or D-Ala as amino donors. In plants, it is involved in nitrogen metabolism and in aspects of carbon and energy metabolism., [UniProtKB, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [ { "id": "2.6.1.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.6.1.1", "type": "external" }, { "id": "2.6.1.78", "url": "https://www.rhea-db.org/rhea/?query=ec:2.6.1.78", "type": "external" }, { "id": "2.6.1.79", "url": "https://www.rhea-db.org/rhea/?query=ec:2.6.1.79", "type": "external" } ], "go_molecular_function": "GO:0030170 pyridoxal phosphate binding;GO:0004069 L-aspartate:2-oxoglutarate aminotransferase activity;GO:0005507 copper ion binding", "go_cellular_component": "GO:0005739 mitochondrion;GO:0005759 mitochondrial matrix;GO:0005777 peroxisome;GO:0005829 cytosol", "go_biological_process": "GO:0006103 2-oxoglutarate metabolic process;GO:0006536 glutamate metabolic process;GO:0006531 aspartate metabolic process", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "P46643-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "P46644-1", "uniprot_id": [ { "id": "AAT3_ARATH", "url": "https://www.uniprot.org/uniprot/P46644", "type": "external" } ], "mass": 48954.0, "length": 449, "protein_name": "Aspartate aminotransferase 3, chloroplastic", "gene_name": "ASP3", "organism": "Arabidopsis", "refseq_name": "aspartate aminotransferase 3", "refseq_ac": [ { "id": "NP_196713", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_196713", "type": "external" } ], "gene_names_uniprotkb": "ASP3; F15N18.110; YLS4", "gene_names_refseq": "ASP3; ASPARTATE AMINOTRANSFERASE; CHLOROPLAST PRECURSOR; F15N18.110; F15N18_110; YELLOW-LEAF-SPECIFIC GENE 4; YLS4; aspartate aminotransferase 3", "protein_names_uniprotkb": "Aspartate aminotransferase 3, chloroplastic; 2.6.1.1; Protein YELLOW-LEAF-SPECIFIC GENE 4; Transaminase A", "protein_names_refseq": "aspartate aminotransferase 3", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G11520)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "11130714;11230571;14593172;14754918;17272265;17951448;18318836;27862469;7894512;9611168", "class_list": "", "function": "Amino acid aminotransferase important for the metabolism of amino acids and Krebs-cycle related organic acids. No activity with D-Asp or D-Ala as amino donors. In plants, it is involved in nitrogen metabolism and in aspects of carbon and energy metabolism., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9CAZ5", "ec_number_list": [ { "id": "2.6.1.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.6.1.1", "type": "external" }, { "id": "2.6.1.78", "url": "https://www.rhea-db.org/rhea/?query=ec:2.6.1.78", "type": "external" }, { "id": "2.6.1.79", "url": "https://www.rhea-db.org/rhea/?query=ec:2.6.1.79", "type": "external" } ], "go_molecular_function": "GO:0030170 pyridoxal phosphate binding;GO:0004069 L-aspartate:2-oxoglutarate aminotransferase activity", "go_cellular_component": "GO:0005739 mitochondrion;GO:0005777 peroxisome;GO:0005829 cytosol;GO:0005886 plasma membrane;GO:0009507 chloroplast", "go_biological_process": "GO:0006103 2-oxoglutarate metabolic process;GO:0006536 glutamate metabolic process;GO:0006531 aspartate metabolic process;GO:0010150 leaf senescence", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "P46644-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "P46645-1", "uniprot_id": [ { "id": "AAT2_ARATH", "url": "https://www.uniprot.org/uniprot/P46645", "type": "external" } ], "mass": 44267.0, "length": 405, "protein_name": "Aspartate aminotransferase, cytoplasmic isozyme 1", "gene_name": "ASP2", "organism": "Arabidopsis", "refseq_name": "aspartate aminotransferase 2", "refseq_ac": [ { "id": "NP_197456", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_197456", "type": "external" } ], "gene_names_uniprotkb": "ASP2; AAT2; T20D1.70", "gene_names_refseq": "AAT2; ASP2; ASPARTATE AMINOTRANSFERASE 2; ASPARTATE AMINOTRANSFERASE; ASPAT; CYTOPLASMIC ISOZYME 1; T20D1.70; T20D1_70; aspartate aminotransferase 2", "protein_names_uniprotkb": "Aspartate aminotransferase, cytoplasmic isozyme 1; 2.6.1.1; Transaminase A", "protein_names_refseq": "aspartate aminotransferase 2", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G19550)", "pathway_count": 1, "publication_count": 14, "publication_id_list": "11130714;12068109;18463617;20466843;21511809;21676488;22223895;23820729;27862469;30833711;7894512;8580968;9535706;9611168", "class_list": "", "function": "Important for the metabolism of amino acids and Krebs-cycle related organic acids. Involved in plant nitrogen metabolism of Asp and Asp-derived amino acids and in the synthesis of Asp/Asn for seed storage (PubMed:12068109). May be involved in the assessment of the pyridoxal phosphate levels in the cell (PubMed:21511809)., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 3, "reported_mutagensis": 9, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [ { "id": "2.6.1.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.6.1.1", "type": "external" }, { "id": "2.6.1.78", "url": "https://www.rhea-db.org/rhea/?query=ec:2.6.1.78", "type": "external" }, { "id": "2.6.1.79", "url": "https://www.rhea-db.org/rhea/?query=ec:2.6.1.79", "type": "external" } ], "go_molecular_function": "GO:0030170 pyridoxal phosphate binding;GO:0004069 L-aspartate:2-oxoglutarate aminotransferase activity;GO:0005507 copper ion binding", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005739 mitochondrion;GO:0005829 cytosol;GO:0005886 plasma membrane;GO:0009506 plasmodesma", "go_biological_process": "GO:0006103 2-oxoglutarate metabolic process;GO:0006536 glutamate metabolic process;GO:0071456 cellular response to hypoxia;GO:0006531 aspartate metabolic process", "synthesized_glycan_count": 0, "hit_score": 1.5, "record_id": "P46645-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000001001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "P46668-1", "uniprot_id": [ { "id": "ATHB6_ARATH", "url": "https://www.uniprot.org/uniprot/P46668", "type": "external" } ], "mass": 35018.0, "length": 311, "protein_name": "Homeobox-leucine zipper protein ATHB-6", "gene_name": "ATHB-6", "organism": "Arabidopsis", "refseq_name": "homeobox protein 6", "refseq_ac": [ { "id": "NP_565536", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_565536", "type": "external" } ], "gene_names_uniprotkb": "ATHB-6; F14M13.17", "gene_names_refseq": "ATHB6; F14M13.17; F14M13_17; HB6; homeobox protein 6", "protein_names_uniprotkb": "Homeobox-leucine zipper protein ATHB-6; HD-ZIP protein ATHB-6; Homeodomain transcription factor ATHB-6", "protein_names_refseq": "homeobox protein 6", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G22430)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "10527431;10617197;12065416;14593172;16055682;23572148;27862469;30833711;7948864", "class_list": "", "function": "Transcription activator that may act as growth regulators in response to water deficit. Interacts with the core sequence 5'-CAATTATTA-3' of promoters in response to ABA and in an ABI1-dependent manner. Involved in the negative regulation of the ABA signaling pathway., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 3, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9SJZ1;Q9SQ78", "ec_number_list": [], "go_molecular_function": "GO:0003677 DNA binding;GO:0003700 DNA-binding transcription factor activity;GO:0000976 transcription cis-regulatory region binding;GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific;GO:0043565 sequence-specific DNA binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0045893 positive regulation of DNA-templated transcription;GO:0009414 response to water deprivation;GO:0009738 abscisic acid-activated signaling pathway;GO:0009788 negative regulation of abscisic acid-activated signaling pathway", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "P46668-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "P47735-1", "uniprot_id": [ { "id": "RLK5_ARATH", "url": "https://www.uniprot.org/uniprot/P47735", "type": "external" } ], "mass": 109096.0, "length": 999, "protein_name": "Receptor-like protein kinase 5", "gene_name": "RLK5", "organism": "Arabidopsis", "refseq_name": "Leucine-rich receptor-like protein kinase family protein", "refseq_ac": [ { "id": "NP_194578", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_194578", "type": "external" } ], "gene_names_uniprotkb": "RLK5; F21O9.180; HAE", "gene_names_refseq": "F20O9.180; F20O9_180; HAESA; HAE; RECEPTOR-LIKE PROTEIN KINASE 5; RLK5", "protein_names_uniprotkb": "Receptor-like protein kinase 5; 2.7.10.1; 2.7.11.1; Protein HAESA", "protein_names_refseq": "Leucine-rich receptor-like protein kinase family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G28490)", "pathway_count": 1, "publication_count": 12, "publication_id_list": "10617198;10640280;18660431;18809915;19124768;20064227;21628627;27058169;27862469;28011693;8086440;8220453", "class_list": "", "function": "Receptor with a dual specificity kinase activity acting on both serine/threonine- and tyrosine-containing substrates that controls floral organ abscission. May interact with the 'INFLORESCENCE DEFICIENT IN ABSCISSION' (IDA) ligands family., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 2, "predicted_n_glycosites": 2, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 7, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 1, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 7, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 7, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 1, "reported_phosphosites": 8, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 0, "biomarker_type": "", "glycan_count": 1, "disease_count": 0, "glyco_site_count": 9, "binding_glycan_count": 0, "secondary_ac_list": "C0LGR4", "ec_number_list": [ { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.3.2.27", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.2.27", "type": "external" }, { "id": "2.7.10.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.-", "type": "external" }, { "id": "3.1.4.46", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.4.46", "type": "external" }, { "id": "2.7.11.25", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.25", "type": "external" }, { "id": "2.7.10.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.2", "type": "external" }, { "id": "2.7.11.22", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.22", "type": "external" }, { "id": "2.7.10.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.1", "type": "external" }, { "id": "2.7.11.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.-", "type": "external" }, { "id": "2.7.11.24", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.24", "type": "external" }, { "id": "2.7.12.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.1", "type": "external" }, { "id": "2.7.11.23", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.23", "type": "external" }, { "id": "2.7.12.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.2", "type": "external" }, { "id": "2.7.-.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.-.-", "type": "external" }, { "id": "3.1.26.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.26.-", "type": "external" }, { "id": "3.1.3.16", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.16", "type": "external" }, { "id": "2.7.11.34", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.34", "type": "external" }, { "id": "4.6.1.2", "url": "https://www.rhea-db.org/rhea/?query=ec:4.6.1.2", "type": "external" } ], "go_molecular_function": "GO:0004672 protein kinase activity;GO:0004674 protein serine/threonine kinase activity;GO:0005524 ATP binding;GO:0004714 transmembrane receptor protein tyrosine kinase activity;GO:0106310 protein serine kinase activity", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "GO:0050829 defense response to Gram-negative bacterium;GO:0046777 protein autophosphorylation;GO:0010468 regulation of gene expression;GO:0045490 pectin catabolic process;GO:0010102 lateral root morphogenesis", "synthesized_glycan_count": 0, "hit_score": 2.1, "record_id": "P47735-1", "record_type": "protein", "filter_code": "0000000.0100101.010000.100000000000000000.1000000010001.101.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "P47924-1", "uniprot_id": [ { "id": "RIBA1_ARATH", "url": "https://www.uniprot.org/uniprot/P47924", "type": "external" } ], "mass": 59056.0, "length": 543, "protein_name": "Bifunctional riboflavin biosynthesis protein RIBA 1, chloroplastic", "gene_name": "RIBA1", "organism": "Arabidopsis", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "RIBA1; MSJ1.14; RIBBA", "gene_names_refseq": "", "protein_names_uniprotkb": "Bifunctional riboflavin biosynthesis protein RIBA 1, chloroplastic; AtRIBA1; GTP cyclohydrolase II", "protein_names_refseq": "", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G64300)", "pathway_count": 1, "publication_count": 11, "publication_id_list": "10783978;19376835;22074104;22081402;23111157;23203051;23776212;27862469;30833711;7642114;9501997", "class_list": "", "function": "Involved in riboflavin biosynthesis. Catalyzes both the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate and the conversion of GTP to 2,5-diamino-6-ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate. RIBA2 and RIBA3 together are not able to complement the loss of function of RIBA1., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 4, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9SBA8", "ec_number_list": [ { "id": "3.5.4.25", "url": "https://www.rhea-db.org/rhea/?query=ec:3.5.4.25", "type": "external" }, { "id": "4.1.99.12", "url": "https://www.rhea-db.org/rhea/?query=ec:4.1.99.12", "type": "external" } ], "go_molecular_function": "GO:0005525 GTP binding;GO:0046872 metal ion binding;GO:0003935 GTP cyclohydrolase II activity;GO:0008686 3,4-dihydroxy-2-butanone-4-phosphate synthase activity", "go_cellular_component": "GO:0009507 chloroplast;GO:0009570 chloroplast stroma", "go_biological_process": "GO:0009231 riboflavin biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 1.2, "record_id": "P47924-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "P47927-1", "uniprot_id": [ { "id": "AP2_ARATH", "url": "https://www.uniprot.org/uniprot/P47927", "type": "external" } ], "mass": 47833.0, "length": 432, "protein_name": "Floral homeotic protein APETALA 2", "gene_name": "AP2", "organism": "Arabidopsis", "refseq_name": "Integrase-type DNA-binding superfamily protein", "refseq_ac": [ { "id": "NP_001190938", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001190938", "type": "external" } ], "gene_names_uniprotkb": "AP2; AP22.49; C7A10.440", "gene_names_refseq": "AP22.49; AP22_49; AP2; APETALA 2; AtAP2; FL1; FLO2; FLORAL HOMEOTIC PROTEIN APETALA 2; FLORAL MUTANT 2; FLOWER 1", "protein_names_uniprotkb": "Floral homeotic protein APETALA 2", "protein_names_refseq": "Integrase-type DNA-binding superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G36920)", "pathway_count": 1, "publication_count": 11, "publication_id_list": "10617198;12805630;12893888;14555699;14593172;16407444;1675158;23034631;27862469;7919989;9461215", "class_list": "", "function": "Probable transcriptional activator that promotes early floral meristem identity (PubMed:7919989). Is required subsequently for the transition of an inflorescence meristem into a floral meristem (PubMed:1675158). Plays a central role in the specification of floral identity, particularly for the normal development of sepals and petals in the wild-type flower, by spatially controlling the expression domains of multiple floral organ identity genes (PubMed:1675158, PubMed:23034631). Acts as A class cadastral protein by repressing the C class floral homeotic gene AGAMOUS in association with other repressors like LEUNIG and SEUSS (PubMed:1675158). Directly represses AGAMOUS by recruiting the transcriptional corepressor TOPLESS and the histone deacetylase HDA19 (PubMed:23034631). It is also required during seed development (PubMed:1675158)., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 4, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q8L7P9", "ec_number_list": [], "go_molecular_function": "GO:0003700 DNA-binding transcription factor activity;GO:0000976 transcription cis-regulatory region binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0030154 cell differentiation;GO:0006355 regulation of DNA-templated transcription;GO:0009908 flower development;GO:0010073 meristem maintenance", "synthesized_glycan_count": 0, "hit_score": 1.2, "record_id": "P47927-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "P47998-1", "uniprot_id": [ { "id": "CYSK1_ARATH", "url": "https://www.uniprot.org/uniprot/P47998", "type": "external" } ], "mass": 33805.0, "length": 322, "protein_name": "Cysteine synthase 1", "gene_name": "OASA1", "organism": "Arabidopsis", "refseq_name": "O-acetylserine (thiol) lyase (OAS-TL) isoform A1", "refseq_ac": [ { "id": "NP_001190732", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001190732", "type": "external" } ], "gene_names_uniprotkb": "OASA1; OAS1; OASS; OLD3; dl3480c", "gene_names_refseq": "ATCYS-3A; CYTACS1; DL3480C; FCAALL.34; O-ACETHYLSERINE SULFHYDRYLASE; O-ACETYLSERINE (THIOL)LYASE; O-acetylserine (thiol) lyase (OAS-TL) isoform A1; OASA1; OLD3; ONSET OF LEAF DEATH 3", "protein_names_uniprotkb": "Cysteine synthase 1; 1; 2.5.1.47; ARAth-Bsas1; At.OAS.5-8; AtCS-A; Beta-substituted Ala synthase 1; CSase A; Cys-3A; O-acetylserine (thiol)-lyase 1; O-acetylserine sulfhydrylase; OAS-TL A; Protein ONSET OF LEAF DEATH 3", "protein_names_refseq": "O-acetylserine (thiol) lyase (OAS-TL) isoform A1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G14880)", "pathway_count": 1, "publication_count": 19, "publication_id_list": "10617198;10889265;10940562;14593172;15258168;16166087;16307301;17194764;18024555;18223034;20429919;20529854;20658158;22092075;27862469;29654922;7729527;8082776;9461215", "class_list": "", "function": "Acts as a major cysteine synthase, probably involved in maintaining organic sulfur level., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 4, "reported_mutagensis": 24, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "O23343;Q1EC56;Q42570;Q94AS7", "ec_number_list": [ { "id": "4.4.1.1", "url": "https://www.rhea-db.org/rhea/?query=ec:4.4.1.1", "type": "external" }, { "id": "2.5.1.47", "url": "https://www.rhea-db.org/rhea/?query=ec:2.5.1.47", "type": "external" }, { "id": "4.4.1.9", "url": "https://www.rhea-db.org/rhea/?query=ec:4.4.1.9", "type": "external" } ], "go_molecular_function": "GO:0003729 mRNA binding;GO:0004124 cysteine synthase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005777 peroxisome;GO:0005829 cytosol;GO:0005886 plasma membrane", "go_biological_process": "GO:0046686 response to cadmium ion;GO:0006535 cysteine biosynthetic process from serine;GO:0019344 cysteine biosynthetic process;GO:0009567 double fertilization forming a zygote and endosperm;GO:0009860 pollen tube growth", "synthesized_glycan_count": 0, "hit_score": 2.0, "record_id": "P47998-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000001001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "P47999-1", "uniprot_id": [ { "id": "CYSKP_ARATH", "url": "https://www.uniprot.org/uniprot/P47999", "type": "external" } ], "mass": 41656.0, "length": 392, "protein_name": "Cysteine synthase, chloroplastic/chromoplastic", "gene_name": "OASB", "organism": "Arabidopsis", "refseq_name": "O-acetylserine (thiol) lyase B", "refseq_ac": [ { "id": "NP_001189745", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001189745", "type": "external" } ], "gene_names_uniprotkb": "OASB; F18O19.14", "gene_names_refseq": "ACS1; ARABIDOPSIS CYSTEINE SYNTHASE 1; ARABIDOPSIS THALIANA CYSTEIN SYNTHASE-B; ATCS-B; CHLOROPLAST O-ACETYLSERINE SULFHYDRYLASE 1; CPACS1; CSASE B; CYSTEINE SYNTHASE; F18O19.14; O-acetylserine (thiol) lyase B; OASB", "protein_names_uniprotkb": "Cysteine synthase, chloroplastic/chromoplastic; 1; 2.5.1.47; ARAth-Bsas2; At.OAS.7-4; AtCS-B; Beta-substituted Ala synthase 2; CS-B; CSase B; O-acetylserine (thiol)-lyase; O-acetylserine sulfhydrylase; OAS-TL B; cpACS1", "protein_names_refseq": "O-acetylserine (thiol) lyase B", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G43750)", "pathway_count": 1, "publication_count": 16, "publication_id_list": "10617197;10889265;10940562;14593172;15258168;16307301;18024555;18223034;20658158;22223895;22329444;23111157;23328941;27862469;7610184;8082776", "class_list": "", "function": "Acts as a major cysteine synthase., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "O22828;Q42568", "ec_number_list": [ { "id": "4.4.1.1", "url": "https://www.rhea-db.org/rhea/?query=ec:4.4.1.1", "type": "external" }, { "id": "2.5.1.47", "url": "https://www.rhea-db.org/rhea/?query=ec:2.5.1.47", "type": "external" }, { "id": "4.4.1.9", "url": "https://www.rhea-db.org/rhea/?query=ec:4.4.1.9", "type": "external" } ], "go_molecular_function": "GO:0004124 cysteine synthase activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005739 mitochondrion;GO:0005768 endosome;GO:0005794 Golgi apparatus;GO:0005829 cytosol", "go_biological_process": "GO:0006535 cysteine biosynthetic process from serine;GO:0019344 cysteine biosynthetic process;GO:0009567 double fertilization forming a zygote and endosperm;GO:0009860 pollen tube growth", "synthesized_glycan_count": 0, "hit_score": 1.7, "record_id": "P47999-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000001001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "P48421-1", "uniprot_id": [ { "id": "C83A1_ARATH", "url": "https://www.uniprot.org/uniprot/P48421", "type": "external" } ], "mass": 57449.0, "length": 502, "protein_name": "Cytochrome P450 83A1", "gene_name": "CYP83A1", "organism": "Arabidopsis", "refseq_name": "cytochrome P450, family 83, subfamily A, polypeptide 1", "refseq_ac": [ { "id": "NP_193113", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_193113", "type": "external" } ], "gene_names_uniprotkb": "CYP83A1; CYP83; F18A5.160; REF2", "gene_names_refseq": "''cytochrome P450; CYP83A1; CYTOCHROME P450 MONOOXYGENASE; F18A5.160; F18A5_160; REDUCED EPIDERMAL FLUORESCENCE 2; REF2; cytochrome P450; family 83; polypeptide 1''; polypeptide 1; subfamily A", "protein_names_uniprotkb": "Cytochrome P450 83A1; 1.14.14.43; CYPLXXXIII; Protein REDUCED EPIDERMAL FLUORESCENCE 2", "protein_names_refseq": "cytochrome P450, family 83, subfamily A, polypeptide 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G13770)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "10617198;12509530;12970475;14593172;27862469;7610196;9620263", "class_list": "", "function": "Involved in the metabolism of aliphatic and aromatic oximes (PubMed:12970475). Involved in the biosynthesis of both short-chain and long-chain aliphatic glucosinolates (PubMed:12509530)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O24429", "ec_number_list": [ { "id": "1.14.14.43", "url": "https://www.rhea-db.org/rhea/?query=ec:1.14.14.43", "type": "external" } ], "go_molecular_function": "GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen;GO:0005506 iron ion binding;GO:0016491 oxidoreductase activity;GO:0020037 heme binding", "go_cellular_component": "GO:0005829 cytosol;GO:0005789 endoplasmic reticulum membrane", "go_biological_process": "GO:0009625 response to insect;GO:0019761 glucosinolate biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "P48421-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "P48482-1", "uniprot_id": [ { "id": "PP12_ARATH", "url": "https://www.uniprot.org/uniprot/P48482", "type": "external" } ], "mass": 35532.0, "length": 312, "protein_name": "Serine/threonine-protein phosphatase PP1 isozyme 2", "gene_name": "TOPP2", "organism": "Arabidopsis", "refseq_name": "type one serine/threonine protein phosphatase 2", "refseq_ac": [ { "id": "NP_001032103", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001032103", "type": "external" } ], "gene_names_uniprotkb": "TOPP2; MNC17.7", "gene_names_refseq": "MNC17.9; MNC17_9; PPO; PROTOPORPHYRINOGEN OXIDASE; TOPP2; type one serine/threonine protein phosphatase 2", "protein_names_uniprotkb": "Serine/threonine-protein phosphatase PP1 isozyme 2; 3.1.3.16; Type one protein phosphatase 2", "protein_names_refseq": "type one serine/threonine protein phosphatase 2", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G59160)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "10048488;14593172;17368080;19329567;21222654;22223895;26943172;27862469;7678768;8220477", "class_list": "", "function": "Serine/threonine-protein phosphatase that possesses phosphatase activity toward para-nitrophenyl phosphate (pNPP) in vitro., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q24JM8;Q94B57", "ec_number_list": [ { "id": "3.1.3.16", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.16", "type": "external" }, { "id": "3.1.3.27", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.27", "type": "external" }, { "id": "3.1.3.48", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.48", "type": "external" }, { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.7.13.3", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.13.3", "type": "external" } ], "go_molecular_function": "GO:0046872 metal ion binding;GO:0004722 protein serine/threonine phosphatase activity", "go_cellular_component": "GO:0000164 protein phosphatase type 1 complex;GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005739 mitochondrion", "go_biological_process": "GO:0006470 protein dephosphorylation", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "P48482-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "P48483-1", "uniprot_id": [ { "id": "PP13_ARATH", "url": "https://www.uniprot.org/uniprot/P48483", "type": "external" } ], "mass": 36215.0, "length": 322, "protein_name": "Serine/threonine-protein phosphatase PP1 isozyme 3", "gene_name": "TOPP3", "organism": "Arabidopsis", "refseq_name": "type one serine/threonine protein phosphatase 3", "refseq_ac": [ { "id": "NP_176587", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_176587", "type": "external" } ], "gene_names_uniprotkb": "TOPP3; F22C12.20", "gene_names_refseq": "TOPP3; type one serine/threonine protein phosphatase 3", "protein_names_uniprotkb": "Serine/threonine-protein phosphatase PP1 isozyme 3; 3.1.3.16; Type one protein phosphatase 3", "protein_names_refseq": "type one serine/threonine protein phosphatase 3", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G64040)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "11130712;14593172;17368080;19329567;21222654;23776212;27862469;7678768", "class_list": "", "function": "Serine/threonine-protein phosphatase that possesses phosphatase activity toward para-nitrophenyl phosphate (pNPP) in vitro., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9SH54", "ec_number_list": [ { "id": "3.1.3.16", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.16", "type": "external" }, { "id": "3.1.3.27", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.27", "type": "external" }, { "id": "3.1.3.48", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.48", "type": "external" }, { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.7.13.3", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.13.3", "type": "external" } ], "go_molecular_function": "GO:0046872 metal ion binding;GO:0004722 protein serine/threonine phosphatase activity", "go_cellular_component": "GO:0000164 protein phosphatase type 1 complex;GO:0005634 nucleus;GO:0005730 nucleolus;GO:0005737 cytoplasm", "go_biological_process": "GO:0006470 protein dephosphorylation", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "P48483-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "P48484-1", "uniprot_id": [ { "id": "PP14_ARATH", "url": "https://www.uniprot.org/uniprot/P48484", "type": "external" } ], "mass": 36372.0, "length": 321, "protein_name": "Serine/threonine-protein phosphatase PP1 isozyme 4", "gene_name": "TOPP4", "organism": "Arabidopsis", "refseq_name": "type one serine/threonine protein phosphatase 4", "refseq_ac": [ { "id": "NP_181514", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_181514", "type": "external" } ], "gene_names_uniprotkb": "TOPP4; T5I7.14", "gene_names_refseq": "TOPP4; type one serine/threonine protein phosphatase 4", "protein_names_uniprotkb": "Serine/threonine-protein phosphatase PP1 isozyme 4; 3.1.3.16; Type one protein phosphatase 4", "protein_names_refseq": "type one serine/threonine protein phosphatase 4", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G39840)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "10617197;17368080;19329567;21222654;22223895;25010794;25560878;26704640;27862469;7678768", "class_list": "", "function": "Serine/threonine-protein phosphatase that possesses phosphatase activity toward para-nitrophenyl phosphate (pNPP) in vitro (PubMed:21222654). Acts as a positive regulator in the gibberellin (GA) signaling pathway to regulate plant growth and development. Promotes the GA-induced and proteasomal-dependent degradation of the DELLA proteins RGA and GAI by directly binding and dephosphorylating these proteins (PubMed:25010794). Involved in the regulation of phytochrome B (phyB) signaling pathway that controls photomorphogenesis. Promotes the proteasomal-dependent degradation of PIF5 factor by directly binding and dephosphorylating this protein (PubMed:26704640). Involved in the regulation of pavement cell (PC) interdigitation by modulating the auxin efflux carrier PIN1 polarity and endocytic trafficking. Regulates PIN1 polar targeting through direct binding and dephosphorylation. Acts antagonistically with PID in regulating PC development (PubMed:25560878)., [UniProtKB, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q147H5", "ec_number_list": [ { "id": "3.1.3.16", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.16", "type": "external" }, { "id": "3.1.3.27", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.27", "type": "external" }, { "id": "3.1.3.48", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.48", "type": "external" }, { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.7.13.3", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.13.3", "type": "external" } ], "go_molecular_function": "GO:0046872 metal ion binding;GO:0004722 protein serine/threonine phosphatase activity", "go_cellular_component": "GO:0000164 protein phosphatase type 1 complex;GO:0005634 nucleus;GO:0005737 cytoplasm", "go_biological_process": "GO:0016311 dephosphorylation;GO:0006468 protein phosphorylation;GO:0006470 protein dephosphorylation;GO:0009740 gibberellic acid mediated signaling pathway;GO:0010161 red light signaling pathway", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "P48484-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "P48491-1", "uniprot_id": [ { "id": "TPIS_ARATH", "url": "https://www.uniprot.org/uniprot/P48491", "type": "external" } ], "mass": 27169.0, "length": 254, "protein_name": "Triosephosphate isomerase, cytosolic", "gene_name": "CTIMC", "organism": "Arabidopsis", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "CTIMC; T22E16.100", "gene_names_refseq": "", "protein_names_uniprotkb": "Triosephosphate isomerase, cytosolic; 5.3.1.1; TIM; Triose-phosphate isomerase", "protein_names_refseq": "", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G55440)", "pathway_count": 1, "publication_count": 11, "publication_id_list": "11130713;12953116;14593172;18463617;20466843;21768351;22092075;23111157;23328941;25561503;27862469", "class_list": "", "function": "", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 4, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9M2T5", "ec_number_list": [ { "id": "5.3.1.1", "url": "https://www.rhea-db.org/rhea/?query=ec:5.3.1.1", "type": "external" } ], "go_molecular_function": "GO:0004807 triose-phosphate isomerase activity;GO:0005507 copper ion binding", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005739 mitochondrion;GO:0005829 cytosol;GO:0005886 plasma membrane;GO:0009506 plasmodesma", "go_biological_process": "GO:0019563 glycerol catabolic process;GO:0010043 response to zinc ion;GO:0005975 carbohydrate metabolic process;GO:0006094 gluconeogenesis;GO:0006096 glycolytic process", "synthesized_glycan_count": 0, "hit_score": 1.2, "record_id": "P48491-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "P48512-1", "uniprot_id": [ { "id": "TF2B1_ARATH", "url": "https://www.uniprot.org/uniprot/P48512", "type": "external" } ], "mass": 34272.0, "length": 312, "protein_name": "Transcription initiation factor IIB-1", "gene_name": "TFIIB1", "organism": "Arabidopsis", "refseq_name": "transcription factor IIB", "refseq_ac": [ { "id": "NP_181694", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_181694", "type": "external" } ], "gene_names_uniprotkb": "TFIIB1; T32G6.15", "gene_names_refseq": "AtTFIIB1; T32G6.15; T32G6_15; TFIIB1; TFIIB; TRANSCRIPTION FACTOR TFIIB; transcription factor IIB 1; transcription factor IIB", "protein_names_uniprotkb": "Transcription initiation factor IIB-1; AtTFIIB1; General transcription factor TFIIB-1", "protein_names_refseq": "transcription factor IIB", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G41630)", "pathway_count": 1, "publication_count": 11, "publication_id_list": "10617197;10634912;14593172;19376835;21768351;23172892;23547107;24531799;25561503;27862469;8811869", "class_list": "", "function": "General factor that plays a major role in the activation of eukaryotic genes transcribed by RNA polymerase II (By similarity). Interacts with TBP2 and is required for activated transcription and possibly basal transcription (PubMed:10634912). Plays important roles in pollen tube growth, guidance, and reception as well as endosperm development. Is partially functionally different from TFIIB2 and PBRP2 (PubMed:23547107)., [UniProtKB, UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 3, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q53YU0", "ec_number_list": [], "go_molecular_function": "GO:0008270 zinc ion binding;GO:0017025 TBP-class protein binding;GO:0016251 RNA polymerase II general transcription initiation factor activity", "go_cellular_component": "GO:0097550 transcription preinitiation complex;GO:0005634 nucleus", "go_biological_process": "GO:0006352 DNA-templated transcription initiation;GO:0070897 transcription preinitiation complex assembly;GO:0009960 endosperm development;GO:0010183 pollen tube guidance;GO:0080092 regulation of pollen tube growth", "synthesized_glycan_count": 0, "hit_score": 1.2, "record_id": "P48512-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "P48523-1", "uniprot_id": [ { "id": "CADH4_ARATH", "url": "https://www.uniprot.org/uniprot/P48523", "type": "external" } ], "mass": 39098.0, "length": 365, "protein_name": "Cinnamyl alcohol dehydrogenase 4", "gene_name": "CAD4", "organism": "Arabidopsis", "refseq_name": "GroES-like zinc-binding alcohol dehydrogenase family protein", "refseq_ac": [ { "id": "NP_188576", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_188576", "type": "external" } ], "gene_names_uniprotkb": "CAD4; CAD-C; CAD2; CAD; LCAD-C; MLD14.19", "gene_names_refseq": "ATCAD4; CAD-C; CAD4; CAD; CINNAMYL ALCOHOL DEHYDROGENASE 4", "protein_names_uniprotkb": "Cinnamyl alcohol dehydrogenase 4; 1.1.1.195; AtCAD4; Cinnamyl alcohol dehydrogenase C", "protein_names_refseq": "GroES-like zinc-binding alcohol dehydrogenase family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G19450)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "10819329;12805615;14593172;14745009;15937231;17467016;18221273;27862469;7870825", "class_list": "", "function": "Involved in lignin biosynthesis in the floral stem. Catalyzes the final step specific for the production of lignin monomers. Catalyzes the NADPH-dependent reduction of coniferaldehyde, 5-hydroxyconiferaldehyde, sinapaldehyde, 4-coumaraldehyde and caffeyl aldehyde to their respective alcohols., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "B1GUX6;Q53ZN1;Q8L9U1;Q94B56", "ec_number_list": [ { "id": "1.1.1.195", "url": "https://www.rhea-db.org/rhea/?query=ec:1.1.1.195", "type": "external" } ], "go_molecular_function": "GO:0008270 zinc ion binding;GO:0045551 cinnamyl-alcohol dehydrogenase activity;GO:0050268 coniferyl-alcohol dehydrogenase activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005829 cytosol", "go_biological_process": "GO:0009809 lignin biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "P48523-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "P48529-1", "uniprot_id": [ { "id": "PPX1_ARATH", "url": "https://www.uniprot.org/uniprot/P48529", "type": "external" } ], "mass": 34738.0, "length": 305, "protein_name": "Serine/threonine-protein phosphatase PP-X isozyme 1", "gene_name": "PPX1", "organism": "Arabidopsis", "refseq_name": "protein phosphatase X 1", "refseq_ac": [ { "id": "NP_194402", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_194402", "type": "external" } ], "gene_names_uniprotkb": "PPX1; EP124; EP129; F10M23.60", "gene_names_refseq": "F10M23.60; F10M23_60; PPX-1; PPX1; PROTEIN PHOSPHATASE X-1; protein phosphatase X 1", "protein_names_uniprotkb": "Serine/threonine-protein phosphatase PP-X isozyme 1; 3.1.3.16", "protein_names_refseq": "protein phosphatase X 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G26720)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "10617198;11197325;17368080;21216945;24357600;27862469;8292782", "class_list": "", "function": "", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [ { "id": "3.1.3.16", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.16", "type": "external" }, { "id": "3.1.3.27", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.27", "type": "external" }, { "id": "3.1.3.48", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.48", "type": "external" }, { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.7.13.3", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.13.3", "type": "external" } ], "go_molecular_function": "GO:0046872 metal ion binding;GO:0004722 protein serine/threonine phosphatase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005829 cytosol;GO:0009532 plastid stroma", "go_biological_process": "GO:0000724 double-strand break repair via homologous recombination;GO:0007131 reciprocal meiotic recombination", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "P48529-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "P48578-1", "uniprot_id": [ { "id": "PP2A4_ARATH", "url": "https://www.uniprot.org/uniprot/P48578", "type": "external" } ], "mass": 35767.0, "length": 313, "protein_name": "Serine/threonine-protein phosphatase PP2A-4 catalytic subunit", "gene_name": "PP2A4", "organism": "Arabidopsis", "refseq_name": "protein phosphatase 2A-4", "refseq_ac": [ { "id": "NP_567066", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_567066", "type": "external" } ], "gene_names_uniprotkb": "PP2A4; EP7; F14P22.90; PP2A3", "gene_names_refseq": "EP7; PP2A-3; PP2A-4; SER/THR PROTEIN PHOSPHATASE; protein phosphatase 2A-3; protein phosphatase 2A-4", "protein_names_uniprotkb": "Serine/threonine-protein phosphatase PP2A-4 catalytic subunit; 3.1.3.16; Protein phosphatase 2A isoform 4", "protein_names_refseq": "protein phosphatase 2A-4", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G58500)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "11130713;14593172;17368080;23167545;25085430;26888284;27862469;28741704;7948902;9524239", "class_list": "", "function": "Functions redundantly with PP2A3, and is involved in establishing auxin gradients, apical-basal axis of polarity and root and shoot apical meristem during embryogenesis. May dephosphorylate PIN1 and regulate its subcellular distribution for polar auxin transport (PubMed:23167545). The holoenzyme composed of PP2AA1, PP2A4 and B'ZETA or B'ETA acts as a negative regulator of plant innate immunity by controlling BAK1 phosphorylation state and activation in surface-localized immune receptor complexes (PubMed:25085430)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9M2G6", "ec_number_list": [ { "id": "3.1.3.16", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.16", "type": "external" }, { "id": "3.1.3.27", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.27", "type": "external" }, { "id": "3.1.3.48", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.48", "type": "external" }, { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.7.13.3", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.13.3", "type": "external" } ], "go_molecular_function": "GO:0046872 metal ion binding;GO:0004722 protein serine/threonine phosphatase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005730 nucleolus;GO:0005737 cytoplasm;GO:0005829 cytosol;GO:0000159 protein phosphatase type 2A complex", "go_biological_process": "GO:0000278 mitotic cell cycle;GO:0006952 defense response;GO:0006470 protein dephosphorylation", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "P48578-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "P48731-1", "uniprot_id": [ { "id": "ATH1_ARATH", "url": "https://www.uniprot.org/uniprot/P48731", "type": "external" } ], "mass": 53900.0, "length": 473, "protein_name": "Homeobox protein ATH1", "gene_name": "ATH1", "organism": "Arabidopsis", "refseq_name": "homeobox protein ATH1", "refseq_ac": [ { "id": "NP_001328067", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001328067", "type": "external" } ], "gene_names_uniprotkb": "ATH1; F26P21.100", "gene_names_refseq": "ATH1; F26P21.100; F26P21_100; homeobox gene 1", "protein_names_uniprotkb": "Homeobox protein ATH1", "protein_names_refseq": "homeobox protein ATH1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G32980)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "10617198;14593172;15120075;16513846;17908157;22060019;27862469;7696878;9380515", "class_list": "", "function": "Transcription factor which may be involved in the signal transduction pathway downstream of the COP1 gene. Controls floral competency as a specific activator of FLC expression. Is responsive of the nuclear import of SHOOT MERISTEMLESS (STM)., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 3, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q7X9S7", "ec_number_list": [], "go_molecular_function": "GO:0003677 DNA binding;GO:0003700 DNA-binding transcription factor activity;GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding;GO:0043565 sequence-specific DNA binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006357 regulation of transcription by RNA polymerase II;GO:0008285 negative regulation of cell population proliferation;GO:0009640 photomorphogenesis;GO:0010073 meristem maintenance", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "P48731-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "P49040-1", "uniprot_id": [ { "id": "SUS1_ARATH", "url": "https://www.uniprot.org/uniprot/P49040", "type": "external" } ], "mass": 92998.0, "length": 808, "protein_name": "Sucrose synthase 1", "gene_name": "SUS1", "organism": "Arabidopsis", "refseq_name": "sucrose synthase 1", "refseq_ac": [ { "id": "NP_001031915", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001031915", "type": "external" } ], "gene_names_uniprotkb": "SUS1; T1M15.230", "gene_names_refseq": "ASUS1; SUS1; T1M15.230; T1M15_230; atsus1; sucrose synthase 1", "protein_names_uniprotkb": "Sucrose synthase 1; 2.4.1.13; AtSUS1; Sucrose-UDP glucosyltransferase 1", "protein_names_refseq": "sucrose synthase 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G20830)", "pathway_count": 1, "publication_count": 15, "publication_id_list": "10567234;11130714;14739263;17257168;17272265;17499718;18635527;19423640;21265895;21865170;22074104;22184213;23328941;27862469;8220487", "class_list": "glycogene;glycosyltransferase", "function": "Sucrose-cleaving enzyme that provides UDP-glucose and fructose for various metabolic pathways., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "B9DFM1;Q56WF2", "ec_number_list": [ { "id": "2.4.1.13", "url": "https://www.rhea-db.org/rhea/?query=ec:2.4.1.13", "type": "external" } ], "go_molecular_function": "GO:0016157 sucrose synthase activity", "go_cellular_component": "GO:0005829 cytosol;GO:0009506 plasmodesma", "go_biological_process": "GO:0072708 response to sorbitol;GO:0006970 response to osmotic stress;GO:0009409 response to cold;GO:0001666 response to hypoxia;GO:0071456 cellular response to hypoxia", "synthesized_glycan_count": 0, "hit_score": 1.6, "record_id": "P49040-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.11000", "kg_view_protein": true }, { "uniprot_canonical_ac": "P49227-1", "uniprot_id": [ { "id": "RL52_ARATH", "url": "https://www.uniprot.org/uniprot/P49227", "type": "external" } ], "mass": 34437.0, "length": 301, "protein_name": "Large ribosomal subunit protein uL18y", "gene_name": "RPL5B", "organism": "Arabidopsis", "refseq_name": "ribosomal protein L5 B", "refseq_ac": [ { "id": "NP_001190439", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001190439", "type": "external" } ], "gene_names_uniprotkb": "RPL5B; MKM21.30; MKM21.5; OLI7", "gene_names_refseq": "MKM21.30; MKM21_30; OLI7; OLIGOCELLULA 7; RPL5B; ribosomal protein L5 B", "protein_names_uniprotkb": "Large ribosomal subunit protein uL18y; 60S ribosomal protein L5-2; Protein OLIGOCELLULA 7; Ribosomal protein L5 B", "protein_names_refseq": "ribosomal protein L5 B", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G39740)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "11598216;14593172;18305007;19392710;25561503;27862469;36423343;8281187;9872454", "class_list": "", "function": "Component of the ribosome, a large ribonucleoprotein complex responsible for the synthesis of proteins in the cell. The small ribosomal subunit (SSU) binds messenger RNAs (mRNAs) and translates the encoded message by selecting cognate aminoacyl-transfer RNA (tRNA) molecules. The large subunit (LSU) contains the ribosomal catalytic site termed the peptidyl transferase center (PTC), which catalyzes the formation of peptide bonds, thereby polymerizing the amino acids delivered by tRNAs into a polypeptide chain. The nascent polypeptides leave the ribosome through a tunnel in the LSU and interact with protein factors that function in enzymatic processing, targeting, and the membrane insertion of nascent chains at the exit of the ribosomal tunnel. Seems involved in the regulation of cell proliferation (PubMed:19392710). Essential in leaf polarity establishment, probably having a role for translation in leaf dorsoventral patterning to specify leaf adaxial identity (PubMed:18305007)., [UniProtKB, PubMed, PubMed, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q41921", "ec_number_list": [], "go_molecular_function": "GO:0003729 mRNA binding;GO:0008097 5S rRNA binding;GO:0003735 structural constituent of ribosome", "go_cellular_component": "GO:0005654 nucleoplasm;GO:0005730 nucleolus;GO:0005737 cytoplasm;GO:0022626 cytosolic ribosome;GO:0022625 cytosolic large ribosomal subunit", "go_biological_process": "GO:0051301 cell division;GO:0006412 translation;GO:0000027 ribosomal large subunit assembly;GO:0009955 adaxial/abaxial pattern specification;GO:0009965 leaf morphogenesis", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "P49227-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "P49294-1", "uniprot_id": [ { "id": "HEM12_ARATH", "url": "https://www.uniprot.org/uniprot/P49294", "type": "external" } ], "mass": 58292.0, "length": 530, "protein_name": "Glutamyl-tRNA reductase 2, chloroplastic", "gene_name": "HEMA2", "organism": "Arabidopsis", "refseq_name": "Glutamyl-tRNA reductase family protein", "refseq_ac": [ { "id": "NP_172465", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_172465", "type": "external" } ], "gene_names_uniprotkb": "HEMA2; F21M12.33", "gene_names_refseq": "F21M12.33; F21M12_33; HEMA2", "protein_names_uniprotkb": "Glutamyl-tRNA reductase 2, chloroplastic; 1.2.1.70; GluTR", "protein_names_refseq": "Glutamyl-tRNA reductase family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G09940)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "11130712;11309145;12139011;17416636;27862469;8605295", "class_list": "", "function": "Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA). Probably involved in wound-induced supply of heme to defensive hemoproteins outside plastids., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O04950;Q0WQP1;Q4V3B7", "ec_number_list": [ { "id": "1.2.1.70", "url": "https://www.rhea-db.org/rhea/?query=ec:1.2.1.70", "type": "external" } ], "go_molecular_function": "GO:0050661 NADP binding;GO:0008883 glutamyl-tRNA reductase activity", "go_cellular_component": "GO:0009507 chloroplast;GO:0009536 plastid", "go_biological_process": "GO:0006979 response to oxidative stress;GO:0006779 porphyrin-containing compound biosynthetic process;GO:0006783 heme biosynthetic process;GO:0006782 protoporphyrinogen IX biosynthetic process;GO:0033014 tetrapyrrole biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "P49294-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "P49599-1", "uniprot_id": [ { "id": "P2C57_ARATH", "url": "https://www.uniprot.org/uniprot/P49599", "type": "external" } ], "mass": 42719.0, "length": 388, "protein_name": "Protein phosphatase 2C 57", "gene_name": "PPH1", "organism": "Arabidopsis", "refseq_name": "thylakoid-associated phosphatase 38", "refseq_ac": [ { "id": "NP_194509", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_194509", "type": "external" } ], "gene_names_uniprotkb": "PPH1; PP2C57; T27E11.40; TAP38", "gene_names_refseq": "PPH1; PROTEIN PHOSPHATASE 1; T27E11.40; T27E11_40; TAP38; thylakoid-associated phosphatase 38", "protein_names_uniprotkb": "Protein phosphatase 2C 57; 3.1.3.16; AtPP2C57; PP2C PPH1; Protein phosphatase 2C PPH1; Thylakoid-associated phosphatase of 38 kDa", "protein_names_refseq": "thylakoid-associated phosphatase 38", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G27800)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "10617198;14593172;15130549;19021904;20126264;20176943;25888588;27862469;7569999", "class_list": "", "function": "Protein phosphatase specifically required for efficient dephosphorylation of the light-harvesting complex II outer antennae (LCHII) and transition from state 2 to state 1 (PubMed:20126264, PubMed:20176943). State transition plays a central role in response to environmental changes and allows to adjust to changing light conditions via the redistribution of light excitation energy between photosystem II (PSII) and photosystem I (PSI) in a short time by relocating LHCII proteins (Probable). Mainly responsible for the dephosphorylation of Lhcb1 and Lhcb2 but not of the photosystem II core proteins (PubMed:20176943)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q3E9V3;Q3E9V4;Q9M0J6;Q9STP6", "ec_number_list": [ { "id": "3.1.3.16", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.16", "type": "external" }, { "id": "3.1.3.27", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.27", "type": "external" }, { "id": "3.1.3.48", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.48", "type": "external" }, { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.7.13.3", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.13.3", "type": "external" } ], "go_molecular_function": "GO:0000287 magnesium ion binding;GO:0030145 manganese ion binding;GO:0004722 protein serine/threonine phosphatase activity;GO:0016791 phosphatase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005730 nucleolus;GO:0005737 cytoplasm;GO:0016020 membrane;GO:0009507 chloroplast", "go_biological_process": "GO:0016311 dephosphorylation;GO:0007165 signal transduction;GO:0009767 photosynthetic electron transport chain;GO:0080005 photosystem stoichiometry adjustment", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "P49599-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "P49688-1", "uniprot_id": [ { "id": "RS23_ARATH", "url": "https://www.uniprot.org/uniprot/P49688", "type": "external" } ], "mass": 30879.0, "length": 285, "protein_name": "Small ribosomal subunit protein uS5x", "gene_name": "RPS2C", "organism": "Arabidopsis", "refseq_name": "Ribosomal protein S5 family protein", "refseq_ac": [ { "id": "NP_181715", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_181715", "type": "external" } ], "gene_names_uniprotkb": "RPS2C; T11A07.6", "gene_names_refseq": "T11A7.6; T11A7_6", "protein_names_uniprotkb": "Small ribosomal subunit protein uS5x; 40S ribosomal protein S2-3; AtRPS2C", "protein_names_refseq": "Ribosomal protein S5 family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G41840)", "pathway_count": 1, "publication_count": 27, "publication_id_list": "10617197;11598216;14593172;17272265;18463617;19245862;19376835;20466843;21768351;23111157;23328941;23572148;23660473;23776212;23820729;24043427;24924143;25561503;26091701;26187819;27419465;27862469;28229965;29167316;30833711;36423343;8281187", "class_list": "", "function": "Component of the ribosome, a large ribonucleoprotein complex responsible for the synthesis of proteins in the cell. The small ribosomal subunit (SSU) binds messenger RNAs (mRNAs) and translates the encoded message by selecting cognate aminoacyl-transfer RNA (tRNA) molecules. The large subunit (LSU) contains the ribosomal catalytic site termed the peptidyl transferase center (PTC), which catalyzes the formation of peptide bonds, thereby polymerizing the amino acids delivered by tRNAs into a polypeptide chain. The nascent polypeptides leave the ribosome through a tunnel in the LSU and interact with protein factors that function in enzymatic processing, targeting, and the membrane insertion of nascent chains at the exit of the ribosomal tunnel. Plays a role in the assembly and function of the 40S ribosomal subunit. Mutations in this protein affects the control of translational fidelity. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly (By similarity). Also involved in RNA-directed DNA methylation (RdDM) (PubMed:28229965)., [UniProtKB, UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 8, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O22936", "ec_number_list": [], "go_molecular_function": "GO:0003729 mRNA binding;GO:0003735 structural constituent of ribosome", "go_cellular_component": "GO:0005730 nucleolus;GO:0005829 cytosol;GO:0022626 cytosolic ribosome;GO:0022627 cytosolic small ribosomal subunit;GO:0009506 plasmodesma", "go_biological_process": "GO:0006412 translation;GO:0031047 regulatory ncRNA-mediated gene silencing", "synthesized_glycan_count": 0, "hit_score": 2.8, "record_id": "P49688-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "P50651-1", "uniprot_id": [ { "id": "RIR2A_ARATH", "url": "https://www.uniprot.org/uniprot/P50651", "type": "external" } ], "mass": 39370.0, "length": 341, "protein_name": "Ribonucleoside-diphosphate reductase small chain A", "gene_name": "RNR2A", "organism": "Arabidopsis", "refseq_name": "ribonucleotide reductase 2A", "refseq_ac": [ { "id": "NP_189000", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_189000", "type": "external" } ], "gene_names_uniprotkb": "RNR2A; MDB19.6; RNR2", "gene_names_refseq": "RNR2A; RNR2; ribonucleotide reductase 2A", "protein_names_uniprotkb": "Ribonucleoside-diphosphate reductase small chain A; 1.17.4.1; AtRNR2; Protein R2at; Ribonucleoside-diphosphate reductase R2A subunit; Ribonucleotide reductase small subunit A", "protein_names_refseq": "ribonucleotide reductase 2A", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G23580)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "10819329;14593172;16399800;21614643;27862469;7821432;9874215", "class_list": "", "function": "Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides., [UniProtKB, PubMed, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9LUH0", "ec_number_list": [ { "id": "1.17.4.1", "url": "https://www.rhea-db.org/rhea/?query=ec:1.17.4.1", "type": "external" } ], "go_molecular_function": "GO:0046872 metal ion binding;GO:0004748 ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005971 ribonucleoside-diphosphate reductase complex", "go_biological_process": "GO:0009259 ribonucleotide metabolic process;GO:0006281 DNA repair;GO:0009263 deoxyribonucleotide biosynthetic process;GO:0051726 regulation of cell cycle", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "P50651-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "P51818-1", "uniprot_id": [ { "id": "HS903_ARATH", "url": "https://www.uniprot.org/uniprot/P51818", "type": "external" } ], "mass": 80052.0, "length": 699, "protein_name": "Heat shock protein 90-3", "gene_name": "HSP90-3", "organism": "Arabidopsis", "refseq_name": "heat shock protein 81-3", "refseq_ac": [ { "id": "NP_200412", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_200412", "type": "external" } ], "gene_names_uniprotkb": "HSP90-3; HSP81-3; HSP81.2; MDA7.5; MUSE10", "gene_names_refseq": "AtHsp90-3; AtHsp90.3; HEAT SHOCK PROTEIN 81.3; HEAT SHOCK PROTEIN 90-3; HEAT SHOCK PROTEIN 90.3; HSP81-3; HSP81.2; Hsp81.3; MDA7.5; MDA7_5; heat shock protein 81-3", "protein_names_uniprotkb": "Heat shock protein 90-3; AtHSP90.3; AtHsp90-3; HSP81.2; Heat shock protein 81-3; Hsp81-3; Protein MUTANT SNC1-ENHANCING 10", "protein_names_refseq": "heat shock protein 81-3", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G56010)", "pathway_count": 1, "publication_count": 28, "publication_id_list": "11599565;14593172;15582930;18463617;19245862;19253305;19688752;20466843;23111157;23572148;23660473;23776212;23820729;23827697;24036116;24601666;24611624;24889324;25561503;26091701;26187819;27532006;27862469;29167316;30833711;7697294;9426614;9679202", "class_list": "", "function": "Functions as a holding molecular chaperone (holdase) which stabilizes unfolding protein intermediates and rapidly releases them in an active form once stress has abated. Functions as a folding molecular chaperone (foldase) that assists the non-covalent folding of proteins in an ATP-dependent manner (PubMed:23827697). Regulates RPP4-mediated temperature-dependent cell death and defense responses (PubMed:24611624). May assist SGT1B in the formation of SCF E3 ubiquitin ligase complexes that target the immune receptors SNC1, RPS2 and RPS4 for degradation, to regulate receptor levels and avoid autoimmunity (PubMed:24889324)., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O03985;Q8VYT8;Q94A60;Q9FKU5", "ec_number_list": [], "go_molecular_function": "GO:0003729 mRNA binding;GO:0005524 ATP binding;GO:0051082 unfolded protein binding;GO:0016887 ATP hydrolysis activity;GO:0140662 ATP-dependent protein folding chaperone", "go_cellular_component": "GO:0099503 secretory vesicle;GO:0005730 nucleolus;GO:0005737 cytoplasm;GO:0005794 Golgi apparatus;GO:0005829 cytosol", "go_biological_process": "GO:0045087 innate immune response;GO:0034605 cellular response to heat;GO:0071277 cellular response to calcium ion;GO:0050821 protein stabilization;GO:0006457 protein folding", "synthesized_glycan_count": 0, "hit_score": 2.9, "record_id": "P51818-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "P52839-1", "uniprot_id": [ { "id": "SOT12_ARATH", "url": "https://www.uniprot.org/uniprot/P52839", "type": "external" } ], "mass": 37139.0, "length": 326, "protein_name": "Cytosolic sulfotransferase 12", "gene_name": "SOT12", "organism": "Arabidopsis", "refseq_name": "sulfotransferase 12", "refseq_ac": [ { "id": "NP_178471", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_178471", "type": "external" } ], "gene_names_uniprotkb": "SOT12; F19B11.21; RAR047; ST1", "gene_names_refseq": "ARABIDOPSIS THALIANA SULFOTRANSFERASE 1; ATST1; AtSOT12; AtSOT1; AtSULT202A1; RAR047; SOT12; SOT1; ST1; ST; SULFOTRANSFERASE 1; SULFOTRANSFERASE; SULFURTRANSFERASE; SULT202A1; sulfotransferase 202A1; sulphotransferase 12; sulphotransferase 1", "protein_names_uniprotkb": "Cytosolic sulfotransferase 12; 2.8.2.-; AtSOT12; AtST1; Sulfotransferase 1", "protein_names_refseq": "sulfotransferase 12", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G03760)", "pathway_count": 1, "publication_count": 13, "publication_id_list": "10617197;14593172;15234990;15317023;17039368;17850744;19173308;20374532;23328941;27862469;8580968;8639757;9212075", "class_list": "", "function": "Sulfotransferase that utilizes 3'-phospho-5'-adenylyl sulfate (PAPS) as sulfonate donor to catalyze the stereospecific sulfate conjugation of 24-epibrassinosteroids. Preferred substrates are 24-epicathasterone and 6-deoxo-24-epicathasterone. Low activity with 22-deoxy-24-epiteasterone. No activity with 24-epimers catasterone and brassinolide. Sulfonates salicylic acid. May be involved in detoxification. Enhances plant response to pathogen infection and contributes to long distance signaling in systemic acquired resistance (SAR)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9SJW2", "ec_number_list": [], "go_molecular_function": "GO:0008146 sulfotransferase activity;GO:0080118 brassinosteroid sulfotransferase activity;GO:1990135 flavonoid sulfotransferase activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005794 Golgi apparatus", "go_biological_process": "GO:0051923 sulfation;GO:0006952 defense response;GO:0009651 response to salt stress;GO:0009751 response to salicylic acid;GO:0016131 brassinosteroid metabolic process", "synthesized_glycan_count": 0, "hit_score": 1.4, "record_id": "P52839-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "P53492-1", "uniprot_id": [ { "id": "ACT7_ARATH", "url": "https://www.uniprot.org/uniprot/P53492", "type": "external" } ], "mass": 41736.0, "length": 377, "protein_name": "Actin-7", "gene_name": "ACT7", "organism": "Arabidopsis", "refseq_name": "actin 7", "refseq_ac": [ { "id": "NP_196543", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_196543", "type": "external" } ], "gene_names_uniprotkb": "ACT7; MYH9.2", "gene_names_refseq": "ACT2; ACT7; AtACT7; MYH9.2; MYH9_2; actin 2; actin 7", "protein_names_uniprotkb": "Actin-7; 3.6.4.-; Actin-2", "protein_names_refseq": "actin 7", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G09810)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "10048488;11449050;14593172;19245862;25561503;27803190;27862469;30833711;8754679;8852856", "class_list": "", "function": "Actins are highly conserved proteins that are involved in various types of cell motility and are ubiquitously expressed in all eukaryotic cells (PubMed:11449050). Essential component of cell cytoskeleton; plays an important role in cytoplasmic streaming, cell shape determination, cell division, organelle movement and extension growth (PubMed:11449050). This is considered as one of the vegetative actins which is involved in the regulation of hormone-induced plant cell proliferation and callus formation (PubMed:11449050). Required for the trafficking and endocytic recycling of ABCG36/PEN3 between the trans-Golgi network and the plasma membrane in root epidermal and cap cells (PubMed:27803190)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 3, "reported_mutagensis": 2, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "P53495", "ec_number_list": [ { "id": "3.1.-.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.-.-", "type": "external" }, { "id": "5.6.2.3", "url": "https://www.rhea-db.org/rhea/?query=ec:5.6.2.3", "type": "external" }, { "id": "3.6.4.12", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.4.12", "type": "external" }, { "id": "3.6.-.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.-.-", "type": "external" }, { "id": "2.7.7.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.7.-", "type": "external" }, { "id": "3.6.4.13", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.4.13", "type": "external" }, { "id": "5.6.2.4", "url": "https://www.rhea-db.org/rhea/?query=ec:5.6.2.4", "type": "external" }, { "id": "5.6.2.-", "url": "https://www.rhea-db.org/rhea/?query=ec:5.6.2.-", "type": "external" }, { "id": "3.6.1.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.1.-", "type": "external" }, { "id": "3.6.4.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.4.-", "type": "external" }, { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.7.4.3", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.4.3", "type": "external" }, { "id": "5.6.2.5", "url": "https://www.rhea-db.org/rhea/?query=ec:5.6.2.5", "type": "external" }, { "id": "7.2.2.-", "url": "https://www.rhea-db.org/rhea/?query=ec:7.2.2.-", "type": "external" }, { "id": "3.6.4.6", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.4.6", "type": "external" }, { "id": "3.6.1.25", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.1.25", "type": "external" } ], "go_molecular_function": "GO:0005200 structural constituent of cytoskeleton;GO:0005524 ATP binding;GO:0016787 hydrolase activity", "go_cellular_component": "GO:0005730 nucleolus;GO:0005737 cytoplasm;GO:0005739 mitochondrion;GO:0005829 cytosol;GO:0005856 cytoskeleton", "go_biological_process": "GO:0015031 protein transport;GO:0051301 cell division;GO:0009611 response to wounding;GO:0008104 intracellular protein localization;GO:0009416 response to light stimulus", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "P53492-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "P53665-1", "uniprot_id": [ { "id": "ACPM1_ARATH", "url": "https://www.uniprot.org/uniprot/P53665", "type": "external" } ], "mass": 13718.0, "length": 122, "protein_name": "Acyl carrier protein 1, mitochondrial", "gene_name": "MTACP1", "organism": "Arabidopsis", "refseq_name": "mitochondrial acyl carrier protein 1", "refseq_ac": [ { "id": "NP_181990", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_181990", "type": "external" } ], "gene_names_uniprotkb": "MTACP1; F16B22.11", "gene_names_refseq": "F16B22.11; MITOCHONDRIAL ACYL CARRIER PROTEIN 1; MTACP-1; MTACP1; mitochondrial acyl carrier protein 1", "protein_names_uniprotkb": "Acyl carrier protein 1, mitochondrial; ACP; MtACP-1; NADH-ubiquinone oxidoreductase 9.6 kDa subunit", "protein_names_refseq": "mitochondrial acyl carrier protein 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G44620)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "10617197;25732537;27862469;8016262", "class_list": "", "function": "Carrier of the growing fatty acid chain in fatty acid biosynthesis (By similarity). May be involved in the synthesis of short and medium chain fatty acids. Accessory and non-catalytic subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), which functions in the transfer of electrons from NADH to the respiratory chain (By similarity)., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0000035 acyl binding;GO:0000036 acyl carrier activity", "go_cellular_component": "GO:0005739 mitochondrion;GO:0005759 mitochondrial matrix;GO:0005829 cytosol;GO:0045271 respiratory chain complex I", "go_biological_process": "GO:0006633 fatty acid biosynthetic process;GO:0006120 mitochondrial electron transport, NADH to ubiquinone;GO:1902600 proton transmembrane transport", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "P53665-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "P54144-1", "uniprot_id": [ { "id": "AMT11_ARATH", "url": "https://www.uniprot.org/uniprot/P54144", "type": "external" } ], "mass": 53577.0, "length": 501, "protein_name": "Ammonium transporter 1 member 1", "gene_name": "AMT1-1", "organism": "Arabidopsis", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "AMT1-1; T6G15.60", "gene_names_refseq": "", "protein_names_uniprotkb": "Ammonium transporter 1 member 1; 1; AtAMT1", "protein_names_refseq": "", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G13510)", "pathway_count": 1, "publication_count": 40, "publication_id_list": "10330477;10617198;12427993;12481062;14506206;14593172;15308754;16806203;16917981;17026539;17085512;17172286;17317660;17869214;18433157;18463617;18686298;19245862;19376835;20374526;20466843;20733066;21423366;22060019;22438062;23111157;23328941;23572148;23660473;23820729;24043427;24924143;25561503;26187819;27419465;27532006;27862469;28011693;30833711;8062823", "class_list": "", "function": "High affinity ammonium transporter probably involved in ammonium uptake from the soil, long-distance transport to the shoots and re-uptake of apoplastic ammonium that derives from photorespiration in shoots. Contributes with AMT1-3 to the overall ammonium uptake capacity in roots under nitrogen-deficiency conditions., [UniProtKB, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 8, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q94C23", "ec_number_list": [], "go_molecular_function": "GO:0008519 ammonium channel activity", "go_cellular_component": "GO:0005886 plasma membrane;GO:0009506 plasmodesma", "go_biological_process": "GO:0097272 ammonium homeostasis;GO:0051258 protein polymerization;GO:0072488 ammonium transmembrane transport;GO:0009413 response to flooding;GO:0010311 lateral root formation", "synthesized_glycan_count": 0, "hit_score": 4.1, "record_id": "P54144-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "P54150-1", "uniprot_id": [ { "id": "MSRA4_ARATH", "url": "https://www.uniprot.org/uniprot/P54150", "type": "external" } ], "mass": 28644.0, "length": 258, "protein_name": "Peptide methionine sulfoxide reductase A4, chloroplastic", "gene_name": "MSR4", "organism": "Arabidopsis", "refseq_name": "peptide met sulfoxide reductase 4", "refseq_ac": [ { "id": "NP_194243", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_194243", "type": "external" } ], "gene_names_uniprotkb": "MSR4; F13M23.270; PMSR4; PMSR", "gene_names_refseq": "F24A6.2; MSRA4; PMSR4; methionine sulfoxide reductase A4; peptide met sulfoxide reductase 4", "protein_names_uniprotkb": "Peptide methionine sulfoxide reductase A4, chloroplastic; 1.8.4.11; AtMSRA4; Peptide Met(O) reductase; Peptide-methionine (S)-S-oxide reductase; Protein-methionine-S-oxide reductase", "protein_names_refseq": "peptide met sulfoxide reductase 4", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G25130)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "10617198;10806242;11874568;14593172;17031545;19376835;22223895;27862469", "class_list": "", "function": "Catalyzes the reduction of methionine sulfoxide (MetSO) to methionine in proteins. Plays a protective role against oxidative stress by restoring activity to proteins that have been inactivated by methionine oxidation. Prevents the methionine sulfoxidation of the heat shock protein HSP21 and its subsequent inactivation. MSRA family specifically reduces the MetSO S-enantiomer., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q8LAX4;Q94A72;Q9SW13", "ec_number_list": [ { "id": "1.8.4.11", "url": "https://www.rhea-db.org/rhea/?query=ec:1.8.4.11", "type": "external" } ], "go_molecular_function": "GO:0008113 peptide-methionine (S)-S-oxide reductase activity;GO:0033744 L-methionine:thioredoxin-disulfide S-oxidoreductase activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005739 mitochondrion;GO:0005829 cytosol;GO:0005886 plasma membrane;GO:0009507 chloroplast", "go_biological_process": "GO:0034599 cellular response to oxidative stress;GO:0009416 response to light stimulus", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "P54150-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "P54609-1", "uniprot_id": [ { "id": "CD48A_ARATH", "url": "https://www.uniprot.org/uniprot/P54609", "type": "external" } ], "mass": 89393.0, "length": 809, "protein_name": "Cell division control protein 48 homolog A", "gene_name": "CDC48A", "organism": "Arabidopsis", "refseq_name": "cell division cycle 48", "refseq_ac": [ { "id": "NP_187595", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_187595", "type": "external" } ], "gene_names_uniprotkb": "CDC48A; CDC48; F8A24.11", "gene_names_refseq": "ATCDC48; CDC48A; CDC48; cell division cycle 48", "protein_names_uniprotkb": "Cell division control protein 48 homolog A; AtCDC48a", "protein_names_refseq": "cell division cycle 48", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G09840)", "pathway_count": 1, "publication_count": 20, "publication_id_list": "11130713;12427991;14593172;15498773;15592873;16621602;17190830;17272265;17693538;18463617;20466843;22223895;23572148;23747397;25561503;27862469;30792274;30833711;35417702;8521820", "class_list": "", "function": "Probably functions in cell division and growth processes (Probable). Interacts with certain SNAREs as part of specialized membrane fusion events where vesicles from the same organelle fuse (homotypic fusion) (Probable). In collaboration with SP1/DIAL1 and P39/SP2, mediates translocalization of ubiquitinated proteins from the chloroplast outer envelope membrane (OEM) for degradation by the 26S proteasome in the cytosol, thus contributing to chloroplast-associated protein degradation (CHLORAD) (PubMed:30792274). CDC48 complex component required for plant tolerance to reactive oxygen species (ROS) by modulating ubiquitin-dependent degradation, by the 26S proteasome, of intra-chloroplast proteins (e.g. RbcL and AtpB) in response to oxidative stress (PubMed:35417702)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 7, "reported_mutagensis": 4, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0005524 ATP binding;GO:0031593 polyubiquitin modification-dependent protein binding;GO:0042802 identical protein binding;GO:0016887 ATP hydrolysis activity", "go_cellular_component": "GO:0034098 VCP-NPL4-UFD1 AAA ATPase complex;GO:0005634 nucleus;GO:0005635 nuclear envelope;GO:0005730 nucleolus;GO:0005737 cytoplasm", "go_biological_process": "GO:0097352 autophagosome maturation;GO:0051301 cell division;GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process;GO:0030162 regulation of proteolysis;GO:0010498 proteasomal protein catabolic process", "synthesized_glycan_count": 0, "hit_score": 2.1, "record_id": "P54609-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "P55217-1", "uniprot_id": [ { "id": "CGS1_ARATH", "url": "https://www.uniprot.org/uniprot/P55217", "type": "external" } ], "mass": 59919.0, "length": 563, "protein_name": "Cystathionine gamma-synthase 1, chloroplastic", "gene_name": "CGS1", "organism": "Arabidopsis", "refseq_name": "Pyridoxal phosphate (PLP)-dependent transferases superfamily protein", "refseq_ac": [ { "id": "NP_186761", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_186761", "type": "external" } ], "gene_names_uniprotkb": "CGS1; CYS1; MTO1; T4P13.19", "gene_names_refseq": "A. THALIANA CYSTATHIONINE GAMMA-SYNTHASE 1; A. thaliana cystathionine gamma-synthetase 1; ATCYS1; AtCGS1; AtCYS1; CGS1; CGS; CYSTATHIONINE GAMMA-SYNTHASE 1; CYSTATHIONINE GAMMA-SYNTHASE; CYSTATHIONINE-GAMMA-SYNTHASE; METHIONINE OVERACCUMULATION 1; MTO1; T4P13.19; T4P13_19", "protein_names_uniprotkb": "Cystathionine gamma-synthase 1, chloroplastic; 2.5.1.160; AtCGS1; METHIONINE OVERACCUMULATION 1; O-succinylhomoserine (thiol)-lyase", "protein_names_refseq": "Pyridoxal phosphate (PLP)-dependent transferases superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G01120)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "10558994;11130713;12121993;14593172;25146485;27862469;7816049;9002610;9531508", "class_list": "", "function": "Catalyzes the first committed step of methionine (Met) biosynthesis. Catalyzes the formation of L-cystathionine from homoserine esters and L-cysteine, via a gamma-replacement reaction. Substrate preference for cystathionine synthesis is O-phospho-L-homoserine (OPH) > O(4)-succinyl-L-homoserine (OSH) >> O-acetyl-L-homoserine (OAH). Is able, at extremely low rate, to catalyze a gamma-elimination of OPH in the absence of cysteine to produce inorganic phosphate (Pi), 2-oxobutanoate and ammonia., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 6, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "P92944;P93038;Q42550", "ec_number_list": [ { "id": "2.5.1.160", "url": "https://www.rhea-db.org/rhea/?query=ec:2.5.1.160", "type": "external" } ], "go_molecular_function": "GO:0030170 pyridoxal phosphate binding;GO:0003962 cystathionine gamma-synthase activity", "go_cellular_component": "GO:0009507 chloroplast;GO:0009570 chloroplast stroma", "go_biological_process": "GO:0009086 methionine biosynthetic process;GO:0019346 transsulfuration;GO:0001887 selenium compound metabolic process", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "P55217-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "P55228-1", "uniprot_id": [ { "id": "GLGS_ARATH", "url": "https://www.uniprot.org/uniprot/P55228", "type": "external" } ], "mass": 56651.0, "length": 520, "protein_name": "Glucose-1-phosphate adenylyltransferase small subunit, chloroplastic", "gene_name": "APS1", "organism": "Arabidopsis", "refseq_name": "ADP glucose pyrophosphorylase 1", "refseq_ac": [ { "id": "NP_199641", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_199641", "type": "external" } ], "gene_names_uniprotkb": "APS1; ADG1; APS; K23F3.2", "gene_names_refseq": "ADG1; ADP GLUCOSE PYROPHOSPHORYLASE SMALL SUBUNIT; ADP glucose pyrophosphorylase 1; ADP-GLUCOSE PYROPHOSPHORYLASE SMALL SUBUNIT 1; APS1; K23F3.2; K23F3_2", "protein_names_uniprotkb": "Glucose-1-phosphate adenylyltransferase small subunit, chloroplastic; 2.7.7.27; ADP-glucose pyrophosphorylase; ADP-glucose synthase; AGPase B; Alpha-D-glucose-1-phosphate adenyl transferase", "protein_names_refseq": "ADP glucose pyrophosphorylase 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G48300)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "14593172;20466843;23572148;27862469;29654922;8292792;9680965", "class_list": "", "function": "This protein plays a role in synthesis of starch. It catalyzes the synthesis of the activated glycosyl donor, ADP-glucose from Glc-1-P and ATP., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 7, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O64400;Q96534", "ec_number_list": [ { "id": "2.7.7.27", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.7.27", "type": "external" } ], "go_molecular_function": "GO:0005524 ATP binding;GO:0008878 glucose-1-phosphate adenylyltransferase activity", "go_cellular_component": "GO:0009507 chloroplast;GO:0009536 plastid;GO:0009570 chloroplast stroma;GO:0010170 glucose-1-phosphate adenylyltransferase complex;GO:0048046 apoplast", "go_biological_process": "GO:0005978 glycogen biosynthetic process;GO:0019252 starch biosynthetic process;GO:0048573 photoperiodism, flowering", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "P55228-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "P55229-1", "uniprot_id": [ { "id": "GLGL1_ARATH", "url": "https://www.uniprot.org/uniprot/P55229", "type": "external" } ], "mass": 57674.0, "length": 522, "protein_name": "Glucose-1-phosphate adenylyltransferase large subunit 1, chloroplastic", "gene_name": "ADG2", "organism": "Arabidopsis", "refseq_name": "ADP glucose pyrophosphorylase large subunit 1", "refseq_ac": [ { "id": "NP_197423", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_197423", "type": "external" } ], "gene_names_uniprotkb": "ADG2; APL1; T24G5.120", "gene_names_refseq": "ADG2; ADP GLUCOSE PYROPHOSPHORYLASE 2; ADP glucose pyrophosphorylase large subunit 1; ADPG PYROPHOSPHORYLASE; APL1; T24G5.120; T24G5_120", "protein_names_uniprotkb": "Glucose-1-phosphate adenylyltransferase large subunit 1, chloroplastic; 2.7.7.27; ADP-glucose pyrophosphorylase; ADP-glucose synthase; AGPase S; Alpha-D-glucose-1-phosphate adenyl transferase", "protein_names_refseq": "ADP glucose pyrophosphorylase large subunit 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G19220)", "pathway_count": 1, "publication_count": 12, "publication_id_list": "10431387;11130714;14593172;19376835;21768351;23572148;23820729;25561503;27862469;28011693;8292792;9193079", "class_list": "", "function": "This protein plays a role in synthesis of starch. It catalyzes the synthesis of the activated glycosyl donor, ADP-glucose from Glc-1-P and ATP., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 7, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O04929;Q9SXS1", "ec_number_list": [ { "id": "2.7.7.27", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.7.27", "type": "external" } ], "go_molecular_function": "GO:0005524 ATP binding;GO:0008878 glucose-1-phosphate adenylyltransferase activity", "go_cellular_component": "GO:0009507 chloroplast;GO:0009570 chloroplast stroma;GO:0009941 chloroplast envelope;GO:0010170 glucose-1-phosphate adenylyltransferase complex", "go_biological_process": "GO:0005978 glycogen biosynthetic process;GO:0019252 starch biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 1.3, "record_id": "P55229-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "P55230-1", "uniprot_id": [ { "id": "GLGL2_ARATH", "url": "https://www.uniprot.org/uniprot/P55230", "type": "external" } ], "mass": 57470.0, "length": 518, "protein_name": "Glucose-1-phosphate adenylyltransferase large subunit 2, chloroplastic", "gene_name": "APL2", "organism": "Arabidopsis", "refseq_name": "ADPGLC-PPase large subunit", "refseq_ac": [ { "id": "NP_174089", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_174089", "type": "external" } ], "gene_names_uniprotkb": "APL2; T22C5.13", "gene_names_refseq": "ADPGLC-PPase large subunit; APL2; T22C5.13; T22C5_13", "protein_names_uniprotkb": "Glucose-1-phosphate adenylyltransferase large subunit 2, chloroplastic; 2.7.7.27; ADP-glucose pyrophosphorylase; ADP-glucose synthase; AGPase S; Alpha-D-glucose-1-phosphate adenyl transferase", "protein_names_refseq": "ADPGLC-PPase large subunit", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G27680)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "11130712;14593172;17272265;25561503;27862469;8292792", "class_list": "", "function": "This protein plays a role in synthesis of starch. It catalyzes the synthesis of the activated glycosyl donor, ADP-glucose from Glc-1-P and ATP., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9SFZ1", "ec_number_list": [ { "id": "2.7.7.27", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.7.27", "type": "external" } ], "go_molecular_function": "GO:0005524 ATP binding;GO:0008878 glucose-1-phosphate adenylyltransferase activity", "go_cellular_component": "GO:0009507 chloroplast;GO:0010170 glucose-1-phosphate adenylyltransferase complex", "go_biological_process": "GO:0005978 glycogen biosynthetic process;GO:0019252 starch biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "P55230-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "P55826-1", "uniprot_id": [ { "id": "PPOC_ARATH", "url": "https://www.uniprot.org/uniprot/P55826", "type": "external" } ], "mass": 57695.0, "length": 537, "protein_name": "Protoporphyrinogen oxidase 1, chloroplastic", "gene_name": "PPOX1", "organism": "Arabidopsis", "refseq_name": "Flavin containing amine oxidoreductase family", "refseq_ac": [ { "id": "NP_192078", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_192078", "type": "external" } ], "gene_names_uniprotkb": "PPOX1; HEMG1; PPOP1; T15B16.13", "gene_names_refseq": "HEMG1; PPO1; PPOX; PROTOPORPHYRINOGEN OXIDASE", "protein_names_uniprotkb": "Protoporphyrinogen oxidase 1, chloroplastic; 1.3.3.4; PPO1", "protein_names_refseq": "Flavin containing amine oxidoreductase family", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G01690)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "10617198;14593172;18463617;20466843;22223895;23572148;23776212;27862469;8982084", "class_list": "", "function": "Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX., [UniProtKB, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 4, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "F4JG44;Q5M730;Q94F25;Q9ZSI5", "ec_number_list": [ { "id": "1.3.3.4", "url": "https://www.rhea-db.org/rhea/?query=ec:1.3.3.4", "type": "external" } ], "go_molecular_function": "GO:0004729 oxygen-dependent protoporphyrinogen oxidase activity;GO:0016491 oxidoreductase activity", "go_cellular_component": "GO:0005829 cytosol;GO:0009507 chloroplast;GO:0009534 chloroplast thylakoid;GO:0009941 chloroplast envelope", "go_biological_process": "GO:0006779 porphyrin-containing compound biosynthetic process;GO:0006782 protoporphyrinogen IX biosynthetic process;GO:0015995 chlorophyll biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "P55826-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000001001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "P55852-1", "uniprot_id": [ { "id": "SUMO1_ARATH", "url": "https://www.uniprot.org/uniprot/P55852", "type": "external" } ], "mass": 10976.0, "length": 100, "protein_name": "Small ubiquitin-related modifier 1", "gene_name": "SUMO1", "organism": "Arabidopsis", "refseq_name": "small ubiquitin-like modifier 1", "refseq_ac": [ { "id": "NP_194414", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_194414", "type": "external" } ], "gene_names_uniprotkb": "SUMO1; F10M23.180; SMT3; SUM1", "gene_names_refseq": "ARABIDOPSIS THALIANA SMALL UBIQUITIN-LIKE MODIFIER 1; ATSUMO1; F10M23.180; F10M23_180; SMALL UBIQUITIN-LIKE MODIFIER 1; SUM1; SUMO 1; SUMO1; small ubiquitin-like modifier 1", "protein_names_uniprotkb": "Small ubiquitin-related modifier 1; AtSUMO1; Ubiquitin-like protein SMT3", "protein_names_refseq": "small ubiquitin-like modifier 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G26840)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "10617198;12482876;14593172;17041025;17644626;20521085;27862469;9119407", "class_list": "", "function": "Ubiquitin-like protein which can be covalently attached to target lysines as a monomer. Does not seem to be involved in protein degradation and may function as an antagonist of ubiquitin in the degradation process. Required for the massive protein sumoylation in the nucleus induced by heat shock and controlled by SIZ1. Involved in the regulation of the heat stress transcription factor HSFA2 in acquired thermotolerance., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q547B9;Q9SZ24", "ec_number_list": [], "go_molecular_function": "GO:0044389 ubiquitin-like protein ligase binding;GO:0031386 protein tag activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005829 cytosol", "go_biological_process": "GO:0016925 protein sumoylation;GO:0009408 response to heat;GO:0010286 heat acclimation", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "P55852-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "P56757-1", "uniprot_id": [ { "id": "ATPA_ARATH", "url": "https://www.uniprot.org/uniprot/P56757", "type": "external" } ], "mass": 55328.0, "length": 507, "protein_name": "ATP synthase subunit alpha, chloroplastic", "gene_name": "atpA", "organism": "Arabidopsis", "refseq_name": "ATP synthase CF1 alpha subunit", "refseq_ac": [ { "id": "NP_051044", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_051044", "type": "external" } ], "gene_names_uniprotkb": "atpA", "gene_names_refseq": "atpA", "protein_names_uniprotkb": "ATP synthase subunit alpha, chloroplastic; 7.1.2.2; ATP synthase F1 sector subunit alpha; F-ATPase subunit alpha", "protein_names_refseq": "ATP synthase CF1 alpha subunit", "tax_id": 3702, "disease": "", "pathway": " (ath:ArthCp007)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "10574454;19376835;21768351;22092075;25561503;28011693;29654922", "class_list": "", "function": "Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit., [UniProtKB, HAMAP]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 8, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [ { "id": "7.1.2.2", "url": "https://www.rhea-db.org/rhea/?query=ec:7.1.2.2", "type": "external" } ], "go_molecular_function": "GO:0003729 mRNA binding;GO:0005524 ATP binding;GO:0008270 zinc ion binding;GO:0043531 ADP binding;GO:0046933 proton-transporting ATP synthase activity, rotational mechanism", "go_cellular_component": "GO:0005739 mitochondrion;GO:0005829 cytosol;GO:0045259 proton-transporting ATP synthase complex;GO:0009535 chloroplast thylakoid membrane;GO:0009507 chloroplast", "go_biological_process": "GO:0009409 response to cold;GO:0015986 proton motive force-driven ATP synthesis", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "P56757-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "P56761-1", "uniprot_id": [ { "id": "PSBD_ARATH", "url": "https://www.uniprot.org/uniprot/P56761", "type": "external" } ], "mass": 39548.0, "length": 353, "protein_name": "Photosystem II D2 protein", "gene_name": "psbD", "organism": "Arabidopsis", "refseq_name": "photosystem II protein D2", "refseq_ac": [ { "id": "NP_051054", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_051054", "type": "external" } ], "gene_names_uniprotkb": "psbD", "gene_names_refseq": "psbD", "protein_names_uniprotkb": "Photosystem II D2 protein; 1.10.3.9; PSII D2 protein; Photosystem Q(A) protein", "protein_names_refseq": "photosystem II protein D2", "tax_id": 3702, "disease": "", "pathway": " (ath:ArthCp017)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "10574454;11113141;19376835;20923938;22616989;27532006", "class_list": "", "function": "Photosystem II (PSII) is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. The D1/D2 (PsbA/PsbD) reaction center heterodimer binds P680, the primary electron donor of PSII as well as several subsequent electron acceptors. D2 is needed for assembly of a stable PSII complex., [UniProtKB, HAMAP]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [ { "id": "1.10.3.9", "url": "https://www.rhea-db.org/rhea/?query=ec:1.10.3.9", "type": "external" } ], "go_molecular_function": "GO:0003729 mRNA binding;GO:0005506 iron ion binding;GO:0009055 electron transfer activity;GO:0016168 chlorophyll binding;GO:0010242 oxygen evolving activity", "go_cellular_component": "GO:0005739 mitochondrion;GO:0009535 chloroplast thylakoid membrane;GO:0009507 chloroplast;GO:0009523 photosystem II;GO:0009534 chloroplast thylakoid", "go_biological_process": "GO:0009772 photosynthetic electron transport in photosystem II", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "P56761-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "P56765-1", "uniprot_id": [ { "id": "ACCD_ARATH", "url": "https://www.uniprot.org/uniprot/P56765", "type": "external" } ], "mass": 55636.0, "length": 488, "protein_name": "Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic", "gene_name": "accD", "organism": "Arabidopsis", "refseq_name": "acetyl-CoA carboxylase beta subunit", "refseq_ac": [ { "id": "NP_051068", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_051068", "type": "external" } ], "gene_names_uniprotkb": "accD", "gene_names_refseq": "accD", "protein_names_uniprotkb": "Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic; 2.1.3.15; ACCase subunit beta; Acetyl-CoA carboxylase carboxyltransferase subunit beta", "protein_names_refseq": "acetyl-CoA carboxylase beta subunit", "tax_id": 3702, "disease": "", "pathway": " (ath:ArthCp031)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "10574454;10759501;11078738;18431481", "class_list": "", "function": "Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA., [UniProtKB, HAMAP]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [ { "id": "2.1.3.15", "url": "https://www.rhea-db.org/rhea/?query=ec:2.1.3.15", "type": "external" } ], "go_molecular_function": "GO:0005524 ATP binding;GO:0008270 zinc ion binding;GO:0003989 acetyl-CoA carboxylase activity;GO:0016743 carboxyl- or carbamoyltransferase activity", "go_cellular_component": "GO:0009317 acetyl-CoA carboxylase complex;GO:0009507 chloroplast;GO:0009536 plastid;GO:0009570 chloroplast stroma;GO:0009941 chloroplast envelope", "go_biological_process": "GO:0006633 fatty acid biosynthetic process;GO:2001295 malonyl-CoA biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "P56765-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "P56766-1", "uniprot_id": [ { "id": "PSAA_ARATH", "url": "https://www.uniprot.org/uniprot/P56766", "type": "external" } ], "mass": 83231.0, "length": 750, "protein_name": "Photosystem I P700 chlorophyll a apoprotein A1", "gene_name": "psaA", "organism": "Arabidopsis", "refseq_name": "photosystem I P700 chlorophyll a apoprotein A1", "refseq_ac": [ { "id": "NP_051059", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_051059", "type": "external" } ], "gene_names_uniprotkb": "psaA", "gene_names_refseq": "psaA", "protein_names_uniprotkb": "Photosystem I P700 chlorophyll a apoprotein A1; 1.97.1.12; PSI-A; PsaA", "protein_names_refseq": "photosystem I P700 chlorophyll a apoprotein A1", "tax_id": 3702, "disease": "", "pathway": " (ath:ArthCp022)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "10574454;25561503", "class_list": "", "function": "PsaA and PsaB bind P700, the primary electron donor of photosystem I (PSI), as well as the electron acceptors A0, A1 and FX. PSI is a plastocyanin-ferredoxin oxidoreductase, converting photonic excitation into a charge separation, which transfers an electron from the donor P700 chlorophyll pair to the spectroscopically characterized acceptors A0, A1, FX, FA and FB in turn. Oxidized P700 is reduced on the lumenal side of the thylakoid membrane by plastocyanin., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q31852", "ec_number_list": [ { "id": "1.97.1.12", "url": "https://www.rhea-db.org/rhea/?query=ec:1.97.1.12", "type": "external" } ], "go_molecular_function": "GO:0000287 magnesium ion binding;GO:0003729 mRNA binding;GO:0009055 electron transfer activity;GO:0051539 4 iron, 4 sulfur cluster binding;GO:0016491 oxidoreductase activity", "go_cellular_component": "GO:0009535 chloroplast thylakoid membrane;GO:0009507 chloroplast;GO:0009522 photosystem I;GO:0009534 chloroplast thylakoid;GO:0009536 plastid", "go_biological_process": "GO:0015979 photosynthesis", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "P56766-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "P56778-1", "uniprot_id": [ { "id": "PSBC_ARATH", "url": "https://www.uniprot.org/uniprot/P56778", "type": "external" } ], "mass": 51868.0, "length": 473, "protein_name": "Photosystem II CP43 reaction center protein", "gene_name": "psbC", "organism": "Arabidopsis", "refseq_name": "photosystem II 44 kDa protein", "refseq_ac": [ { "id": "NP_051055", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_051055", "type": "external" } ], "gene_names_uniprotkb": "psbC; CP43", "gene_names_refseq": "psbC", "protein_names_uniprotkb": "Photosystem II CP43 reaction center protein; PSII 43 kDa protein; Protein CP-43", "protein_names_refseq": "photosystem II 44 kDa protein", "tax_id": 3702, "disease": "", "pathway": " (ath:ArthCp018)", "pathway_count": 1, "publication_count": 13, "publication_id_list": "10574454;11113141;17601825;18463617;19245862;19376835;20466843;20605914;20923938;22223895;22616989;24632535;29654922", "class_list": "", "function": "One of the components of the core complex of photosystem II (PSII). It binds chlorophyll and helps catalyze the primary light-induced photochemical processes of PSII. PSII is a light-driven water:plastoquinone oxidoreductase, using light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation., [UniProtKB, HAMAP]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 6, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0003729 mRNA binding;GO:0046872 metal ion binding;GO:0016168 chlorophyll binding", "go_cellular_component": "GO:0009535 chloroplast thylakoid membrane;GO:0009507 chloroplast;GO:0009523 photosystem II;GO:0009533 chloroplast stromal thylakoid;GO:0009534 chloroplast thylakoid", "go_biological_process": "GO:0009772 photosynthetic electron transport in photosystem II", "synthesized_glycan_count": 0, "hit_score": 1.4, "record_id": "P56778-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "P56780-1", "uniprot_id": [ { "id": "PSBH_ARATH", "url": "https://www.uniprot.org/uniprot/P56780", "type": "external" } ], "mass": 7702.0, "length": 73, "protein_name": "Photosystem II reaction center protein H", "gene_name": "psbH", "organism": "Arabidopsis", "refseq_name": "photosystem II protein H", "refseq_ac": [ { "id": "NP_051087", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_051087", "type": "external" } ], "gene_names_uniprotkb": "psbH", "gene_names_refseq": "psbH", "protein_names_uniprotkb": "Photosystem II reaction center protein H; PSII-H; Photosystem II 10 kDa phosphoprotein", "protein_names_refseq": "photosystem II protein H", "tax_id": 3702, "disease": "", "pathway": " (ath:ArthCp052)", "pathway_count": 1, "publication_count": 11, "publication_id_list": "10574454;11113141;16040609;19376835;20923938;21768351;22223895;24043427;25561503;28011693;29654922", "class_list": "", "function": "One of the components of the core complex of photosystem II (PSII), required for its stability and/or assembly. PSII is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation., [UniProtKB, HAMAP]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 6, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0042301 phosphate ion binding;GO:0003729 mRNA binding", "go_cellular_component": "GO:0009535 chloroplast thylakoid membrane;GO:0009507 chloroplast;GO:0009534 chloroplast thylakoid;GO:0009536 plastid;GO:0009579 thylakoid", "go_biological_process": "GO:0050821 protein stabilization;GO:0015979 photosynthesis", "synthesized_glycan_count": 0, "hit_score": 1.2, "record_id": "P56780-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "P57691-1", "uniprot_id": [ { "id": "RLA03_ARATH", "url": "https://www.uniprot.org/uniprot/P57691", "type": "external" } ], "mass": 34390.0, "length": 323, "protein_name": "Large ribosomal subunit protein uL10x", "gene_name": "RPP0C", "organism": "Arabidopsis", "refseq_name": "Ribosomal protein L10 family protein", "refseq_ac": [ { "id": "NP_187734", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_187734", "type": "external" } ], "gene_names_uniprotkb": "RPP0C; F11B9.17; F11B9_119", "gene_names_refseq": "", "protein_names_uniprotkb": "Large ribosomal subunit protein uL10x; 60S acidic ribosomal protein P0-3", "protein_names_refseq": "Ribosomal protein L10 family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G11250)", "pathway_count": 1, "publication_count": 30, "publication_id_list": "11130713;11598216;14593172;17934214;18463617;18686298;19245862;19376835;19688752;19900291;20466843;21768351;22438062;22440515;22631563;23111157;23572148;23660473;23776212;23820729;24601666;24924143;26091701;26187819;27419465;27862469;29167316;29654922;30833711;36423343", "class_list": "", "function": "Ribosomal protein P0 is the functional equivalent of E.coli protein L10., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 3, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q8LAM3", "ec_number_list": [], "go_molecular_function": "GO:0003729 mRNA binding;GO:0003735 structural constituent of ribosome;GO:0070180 large ribosomal subunit rRNA binding", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005829 cytosol;GO:0022626 cytosolic ribosome;GO:0022625 cytosolic large ribosomal subunit", "go_biological_process": "GO:0042254 ribosome biogenesis;GO:0042742 defense response to bacterium;GO:0002181 cytoplasmic translation", "synthesized_glycan_count": 0, "hit_score": 3.1, "record_id": "P57691-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "P57741-1", "uniprot_id": [ { "id": "PFD3_ARATH", "url": "https://www.uniprot.org/uniprot/P57741", "type": "external" } ], "mass": 21465.0, "length": 195, "protein_name": "Prefoldin subunit 3", "gene_name": "PFD3", "organism": "Arabidopsis", "refseq_name": "prefoldin 3", "refseq_ac": [ { "id": "NP_001032045", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001032045", "type": "external" } ], "gene_names_uniprotkb": "PFD3; GIM2; K6M13.5", "gene_names_refseq": "K6M13.5; K6M13_5; PFD3; prefoldin 3", "protein_names_uniprotkb": "Prefoldin subunit 3; Gene involved in microtubule biogenesis 2", "protein_names_refseq": "prefoldin 3", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G49510)", "pathway_count": 1, "publication_count": 11, "publication_id_list": "10718197;14593172;19004800;19825635;22223895;23328941;23583555;27862469;28412546;29654922;32396196", "class_list": "", "function": "Binds specifically to cytosolic chaperonin (c-CPN) and transfers target proteins to it (PubMed:19825635). Binds to nascent polypeptide chain and promotes folding in an environment in which there are many competing pathways for nonnative proteins (PubMed:19825635). Together with other chaperonins, contribute to the regulation of gene expression by modulating the spliceosome function on pre-mRNA splicing post-transcriptionally by acting as a co-chaperone of Hsp90 to control levels of LSM8 (By similarity). Required for the biogenesis of tubulins and for subsequent microtubules (MTs) organization and dynamicity (PubMed:19825635). Necessary for tolerance to NaCl salt stress (PubMed:19825635). Involved in the process leading to microtubules dissociation in response to gibberellic acid (GA) probably due to the DELLA proteins-mediated translocation of the prefoldin co-chaperone complex from the cytoplasm to the nucleus (By similarity). Prevents cold acclimation (e.g. 7 days at 4 degrees Celsius) in a DELLA proteins-dependent manner by promoting nuclear proteasome-mediated HY5 degradation, thus modulating the expression of several genes and reducing anthocyanin biosynthesis, but seems not involved in constitutive freezing tolerance (PubMed:28412546)., [UniProtKB, UniProtKB, PubMed, UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0015631 tubulin binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0016272 prefoldin complex", "go_biological_process": "GO:0006397 mRNA processing;GO:0009409 response to cold;GO:0006457 protein folding;GO:0009631 cold acclimation;GO:0009651 response to salt stress", "synthesized_glycan_count": 0, "hit_score": 1.2, "record_id": "P57741-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "P57742-1", "uniprot_id": [ { "id": "PFD5_ARATH", "url": "https://www.uniprot.org/uniprot/P57742", "type": "external" } ], "mass": 16410.0, "length": 151, "protein_name": "Prefoldin subunit 5", "gene_name": "PFD5", "organism": "Arabidopsis", "refseq_name": "prefoldin 5", "refseq_ac": [ { "id": "NP_197720", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_197720", "type": "external" } ], "gene_names_uniprotkb": "PFD5; GIM5; MKD15.15", "gene_names_refseq": "MKD15.15; MKD15_15; PFD5; prefoldin 5", "protein_names_uniprotkb": "Prefoldin subunit 5; Gene involved in microtubule biogenesis 5", "protein_names_refseq": "prefoldin 5", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G23290)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "14593172;19004800;19825635;23583555;27862469;28412546;29463731;32396196;9501997", "class_list": "", "function": "Binds specifically to cytosolic chaperonin (c-CPN) and transfers target proteins to it (PubMed:19825635). Binds to nascent polypeptide chain and promotes folding in an environment in which there are many competing pathways for nonnative proteins (PubMed:19825635). Together with other chaperonins, contribute to the regulation of gene expression by modulating the spliceosome function on pre-mRNA splicing post-transcriptionally by acting as a co-chaperone of Hsp90 to control levels of LSM8 (By similarity). Required for the biogenesis of tubulins and for subsequent microtubules (MTs) organization and dynamicity (PubMed:19825635). Necessary for tolerance to NaCl salt stress (PubMed:19825635). Involved in the process leading to microtubules dissociation in response to gibberellic acid (GA) probably due to the DELLA proteins-mediated translocation of the prefoldin co-chaperone complex from the cytoplasm to the nucleus (PubMed:23583555). Prevents cold acclimation (e.g. 7 days at 4 degrees Celsius) in a DELLA proteins-dependent manner by promoting nuclear proteasome-mediated HY5 degradation, thus modulating the expression of several genes and reducing anthocyanin biosynthesis, but seems not involved in constitutive freezing tolerance (PubMed:28412546). Contributes to the GA-dependent regulation of PIN2 trafficking at the plasma membrane, thus influencing auxin flux (PubMed:29463731)., [UniProtKB, PubMed, UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0051082 unfolded protein binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0016272 prefoldin complex;GO:0009536 plastid", "go_biological_process": "GO:0006397 mRNA processing;GO:0009409 response to cold;GO:0006457 protein folding;GO:0009631 cold acclimation;GO:0009651 response to salt stress", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "P57742-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "P57752-1", "uniprot_id": [ { "id": "ACBP6_ARATH", "url": "https://www.uniprot.org/uniprot/P57752", "type": "external" } ], "mass": 10386.0, "length": 92, "protein_name": "Acyl-CoA-binding domain-containing protein 6", "gene_name": "ACBP6", "organism": "Arabidopsis", "refseq_name": "acyl-CoA-binding protein 6", "refseq_ac": [ { "id": "NP_174462", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_174462", "type": "external" } ], "gene_names_uniprotkb": "ACBP6; F5M6.27", "gene_names_refseq": "ACBP6; ACBP; ACYL-COA-BINDING PROTEIN; AtACBP6; F5M6.27; F5M6_27; acyl-CoA-binding protein 6", "protein_names_uniprotkb": "Acyl-CoA-binding domain-containing protein 6; ACBP; Acyl-CoA binding protein 6; Acyl-CoA-binding protein", "protein_names_refseq": "acyl-CoA-binding protein 6", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G31812)", "pathway_count": 1, "publication_count": 11, "publication_id_list": "11130712;14593172;18463617;18621979;19121948;20466843;23572148;23776212;27862469;28786767;8660683", "class_list": "", "function": "Binds medium- and long-chain acyl-CoA esters with very high affinity. May function as an intracellular carrier of acyl-CoA esters. Confers resistance to cold and freezing. Interacts with phosphatidylcholine and derivatives, but not phosphatidic acid and lysophosphatidylcholine. May be involved in phospholipid metabolism., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q8L9P1", "ec_number_list": [], "go_molecular_function": "GO:0000062 fatty-acyl-CoA binding;GO:0031210 phosphatidylcholine binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005829 cytosol;GO:0005886 plasma membrane", "go_biological_process": "GO:0006631 fatty acid metabolic process;GO:0006869 lipid transport;GO:0009409 response to cold;GO:0001666 response to hypoxia;GO:0009646 response to absence of light", "synthesized_glycan_count": 0, "hit_score": 1.2, "record_id": "P57752-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "P59226-1", "uniprot_id": [ { "id": "H31_ARATH", "url": "https://www.uniprot.org/uniprot/P59226", "type": "external" } ], "mass": 15268.0, "length": 136, "protein_name": "Histone H3.1", "gene_name": "HTR13; HTR1; HTR2; HTR3; HTR9", "organism": "Arabidopsis", "refseq_name": "Histone superfamily protein", "refseq_ac": [ { "id": "NP_189372", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_189372", "type": "external" } ], "gene_names_uniprotkb": "HTR13; HTR1; HTR2; HTR3; HTR9; F12B17_250; F12B17_260; K1G2.8; MNA5.9; T12M4.9", "gene_names_refseq": "H3.1; histone 3.1", "protein_names_uniprotkb": "Histone H3.1", "protein_names_refseq": "Histone superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G09200); (ath:AT3G27360); (ath:AT5G10390); (ath:AT5G10400); (ath:AT5G65360)", "pathway_count": 5, "publication_count": 32, "publication_id_list": "10819329;11130712;11130714;11898023;11910074;12456661;12581305;14593172;14610360;14712277;14992728;15010610;15014946;15457214;15598823;15753571;16258034;16262706;16299497;16546438;16648464;17174094;17242155;17363895;17439305;19503079;20631708;24626927;25086063;27862469;35298257;9679202", "class_list": "", "function": "Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 3, "reported_mutagensis": 2, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0046982 protein heterodimerization activity;GO:0031492 nucleosomal DNA binding;GO:0030527 structural constituent of chromatin", "go_cellular_component": "GO:0005576 extracellular region;GO:0005634 nucleus;GO:0005829 cytosol;GO:0005886 plasma membrane;GO:0010369 chromocenter", "go_biological_process": "GO:0031507 heterochromatin formation", "synthesized_glycan_count": 0, "hit_score": 3.3, "record_id": "P59226-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "P59271-1", "uniprot_id": [ { "id": "R27AA_ARATH", "url": "https://www.uniprot.org/uniprot/P59271", "type": "external" } ], "mass": 17672.0, "length": 156, "protein_name": "Ubiquitin-ribosomal protein eS31z fusion protein", "gene_name": "RPS27AA", "organism": "Arabidopsis", "refseq_name": "Ribosomal protein S27a / Ubiquitin family protein", "refseq_ac": [ { "id": "NP_173755", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_173755", "type": "external" } ], "gene_names_uniprotkb": "RPS27AA; F26F24.28; F28C11.5; UBQ16", "gene_names_refseq": "F26F24.28; F26F24_28", "protein_names_uniprotkb": "Ubiquitin-ribosomal protein eS31z fusion protein; 40S ribosomal protein S27a-1", "protein_names_refseq": "Ribosomal protein S27a / Ubiquitin family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G23410)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "11130712;11598216;20466843;27862469;36423343", "class_list": "", "function": "Component of the 40S subunit of the ribosome., [UniProtKB]; Ubiquitin exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked: Lys-11-linked is involved in ERAD (endoplasmic reticulum-associated degradation) and in cell-cycle regulation; Lys-29-linked is involved in lysosomal degradation; Lys-33-linked is involved in kinase modification; Lys-48-linked is involved in protein degradation via the proteasome; Lys-63-linked is involved in endocytosis, and DNA-damage responses. Linear polymer chains formed via attachment by the initiator Met lead to cell signaling. Ubiquitin is usually conjugated to Lys residues of target proteins, however, in rare cases, conjugation to Cys or Ser residues has been observed. When polyubiquitin is free (unanchored-polyubiquitin), it also has distinct roles, such as in activation of protein kinases, and in signaling (By similarity)., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O80715;P59263;Q29PZ3;Q38875;Q9LDJ2;Q9LYW1;Q9M0W3;Q9M1P9;Q9S7X3", "ec_number_list": [], "go_molecular_function": "GO:0003729 mRNA binding;GO:0008270 zinc ion binding;GO:0003735 structural constituent of ribosome;GO:0031386 protein tag activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005794 Golgi apparatus;GO:0005829 cytosol;GO:0022626 cytosolic ribosome;GO:0022627 cytosolic small ribosomal subunit", "go_biological_process": "GO:0016567 protein ubiquitination;GO:0006412 translation;GO:0019941 modification-dependent protein catabolic process", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "P59271-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "P62090-1", "uniprot_id": [ { "id": "PSAC_ARATH", "url": "https://www.uniprot.org/uniprot/P62090", "type": "external" } ], "mass": 9038.0, "length": 81, "protein_name": "Photosystem I iron-sulfur center", "gene_name": "psaC", "organism": "Arabidopsis", "refseq_name": "photosystem I subunit VII", "refseq_ac": [ { "id": "NP_051110", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_051110", "type": "external" } ], "gene_names_uniprotkb": "psaC; frxA", "gene_names_refseq": "psaC", "protein_names_uniprotkb": "Photosystem I iron-sulfur center; 1.97.1.12; 9 kDa polypeptide; PSI-C; Photosystem I subunit VII; PsaC", "protein_names_refseq": "photosystem I subunit VII", "tax_id": 3702, "disease": "", "pathway": " (ath:ArthCp075)", "pathway_count": 1, "publication_count": 3, "publication_id_list": "10574454;11181728;25561503", "class_list": "", "function": "Apoprotein for the two 4Fe-4S centers FA and FB of photosystem I (PSI); essential for photochemical activity. FB is the terminal electron acceptor of PSI, donating electrons to ferredoxin. The C-terminus interacts with PsaA/B/D and helps assemble the protein into the PSI complex. Required for binding of PsaD and PsaE to PSI. PSI is a plastocyanin-ferredoxin oxidoreductase, converting photonic excitation into a charge separation, which transfers an electron from the donor P700 chlorophyll pair to the spectroscopically characterized acceptors A0, A1, FX, FA and FB in turn., [UniProtKB, HAMAP]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "P07136;P25252;Q9MRU0;Q9T2J4", "ec_number_list": [ { "id": "1.97.1.12", "url": "https://www.rhea-db.org/rhea/?query=ec:1.97.1.12", "type": "external" } ], "go_molecular_function": "GO:0003729 mRNA binding;GO:0009055 electron transfer activity;GO:0046872 metal ion binding;GO:0051539 4 iron, 4 sulfur cluster binding;GO:0016491 oxidoreductase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0009535 chloroplast thylakoid membrane;GO:0009507 chloroplast;GO:0009522 photosystem I;GO:0009533 chloroplast stromal thylakoid", "go_biological_process": "GO:0009773 photosynthetic electron transport in photosystem I;GO:0015979 photosynthesis", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "P62090-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "P62598-1", "uniprot_id": [ { "id": "ARR12_ARATH", "url": "https://www.uniprot.org/uniprot/P62598", "type": "external" } ], "mass": 65626.0, "length": 596, "protein_name": "Two-component response regulator ARR12", "gene_name": "ARR12", "organism": "Arabidopsis", "refseq_name": "response regulator 12", "refseq_ac": [ { "id": "NP_180090", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_180090", "type": "external" } ], "gene_names_uniprotkb": "ARR12; F13D4.140", "gene_names_refseq": "ARR12; AtARR12; F13D4.140; F13D4_140; RR12; response regulator 12", "protein_names_uniprotkb": "Two-component response regulator ARR12", "protein_names_refseq": "response regulator 12", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G25180)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "10617197;11115876;15173562;17363254;20605455;27862469", "class_list": "", "function": "Transcriptional activator that binds specifically to the DNA sequence 5'-[AG]GATT-3'. Functions as a response regulator involved in His-to-Asp phosphorelay signal transduction system. Phosphorylation of the Asp residue in the receiver domain activates the ability of the protein to promote the transcription of target genes. Could directly activate some type-A response regulators in response to cytokinins. Involved in the root-meristem size determination through the regulation of cell differentiation (PubMed:17363254). Involved in activating SHY2 during meristem growth and controls PIN expression via activation of SHY2 (PubMed:20605455)., [UniProtKB, UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "F4IRL1", "ec_number_list": [], "go_molecular_function": "GO:0003677 DNA binding;GO:0003700 DNA-binding transcription factor activity;GO:0000156 phosphorelay response regulator activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0009414 response to water deprivation;GO:0009736 cytokinin-activated signaling pathway;GO:0009735 response to cytokinin;GO:0010082 regulation of root meristem growth", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "P62598-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "P69834-1", "uniprot_id": [ { "id": "ISPD_ARATH", "url": "https://www.uniprot.org/uniprot/P69834", "type": "external" } ], "mass": 33937.0, "length": 302, "protein_name": "2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase, chloroplastic", "gene_name": "ISPD", "organism": "Arabidopsis", "refseq_name": "Nucleotide-diphospho-sugar transferases superfamily protein", "refseq_ac": [ { "id": "NP_001325418", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001325418", "type": "external" } ], "gene_names_uniprotkb": "ISPD; MCT; MECT; MEPCT; T8K22.20", "gene_names_refseq": "2-C-METHYL-D-ERYTHRITOL 4-PHOSPHATE CYTIDYLTRANSFERASE; 4-DIPHOSPHOCYTIDYL-2C-METHYL-D-ERYTHRITOL SYNTHASE; ATMEPCT; ISPD; MCT; T8K22.20; T8K22_20", "protein_names_uniprotkb": "2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase, chloroplastic; 2.7.7.60; 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; AtMECT; AtMEPCT; MEP cytidylyltransferase", "protein_names_refseq": "Nucleotide-diphospho-sugar transferases superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G02500)", "pathway_count": 1, "publication_count": 11, "publication_id_list": "10617197;10841550;11910074;12029484;14593172;15863698;16478479;18236010;22223895;27862469;30833711", "class_list": "", "function": "Enzyme of the plastid non-mevalonate pathway for isoprenoid biosynthesis that catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate (MEP). Is essential for chloroplast development and required for pigments and gibberellins biosynthesis., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O64726;Q9LL91", "ec_number_list": [ { "id": "2.7.7.60", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.7.60", "type": "external" } ], "go_molecular_function": "GO:0050518 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0009507 chloroplast;GO:0009570 chloroplast stroma", "go_biological_process": "GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway", "synthesized_glycan_count": 0, "hit_score": 1.2, "record_id": "P69834-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "P82538-1", "uniprot_id": [ { "id": "PPL1_ARATH", "url": "https://www.uniprot.org/uniprot/P82538", "type": "external" } ], "mass": 25623.0, "length": 230, "protein_name": "PsbP-like protein 1, chloroplastic", "gene_name": "PPL1", "organism": "Arabidopsis", "refseq_name": "PsbP-like protein 1", "refseq_ac": [ { "id": "NP_191093", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_191093", "type": "external" } ], "gene_names_uniprotkb": "PPL1; T26I12.210", "gene_names_refseq": "PPL1; PsbP-like protein 1", "protein_names_uniprotkb": "PsbP-like protein 1, chloroplastic; OEC23-like protein 4; PsbP-related thylakoid lumenal protein 2", "protein_names_refseq": "PsbP-like protein 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G55330)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "11130713;11719511;14593172;17827269;18431481;22092075;27862469", "class_list": "", "function": "Required for efficient repair of photodamaged PSII, but not tightly associated with the complex., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0005509 calcium ion binding", "go_cellular_component": "GO:0005829 cytosol;GO:0019898 extrinsic component of membrane;GO:0009535 chloroplast thylakoid membrane;GO:0009507 chloroplast;GO:0009543 chloroplast thylakoid lumen", "go_biological_process": "GO:0048564 photosystem I assembly", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "P82538-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "P82874-1", "uniprot_id": [ { "id": "TO203_ARATH", "url": "https://www.uniprot.org/uniprot/P82874", "type": "external" } ], "mass": 22565.0, "length": 202, "protein_name": "Mitochondrial import receptor subunit TOM20-3", "gene_name": "TOM20-3", "organism": "Arabidopsis", "refseq_name": "translocase of outer membrane 20 kDa subunit 3", "refseq_ac": [ { "id": "NP_189344", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_189344", "type": "external" } ], "gene_names_uniprotkb": "TOM20-3; MOJ10.15", "gene_names_refseq": "TOM20-3; translocase of outer membrane 20 kDa subunit 3", "protein_names_uniprotkb": "Mitochondrial import receptor subunit TOM20-3; Translocase of outer membrane 20 kDa subunit 3", "protein_names_refseq": "translocase of outer membrane 20 kDa subunit 3", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G27080)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "10819329;11161051;14593172;14730085;16461275;17981999;22060019;22223895;27862469", "class_list": "", "function": "Central component of the receptor complex responsible for the recognition and translocation of cytosolically synthesized mitochondrial preproteins. Together with TOM22 functions as the transit peptide receptor at the surface of the mitochondrion outer membrane and facilitates the movement of preproteins into the translocation pore., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q8LBR8;Q9LSC8", "ec_number_list": [], "go_molecular_function": "GO:0015450 protein-transporting ATPase activity", "go_cellular_component": "GO:0005739 mitochondrion;GO:0005741 mitochondrial outer membrane;GO:0005743 mitochondrial inner membrane;GO:0005829 cytosol;GO:0005744 TIM23 mitochondrial import inner membrane translocase complex", "go_biological_process": "GO:0045040 protein insertion into mitochondrial outer membrane;GO:0006626 protein targeting to mitochondrion", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "P82874-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "P83484-1", "uniprot_id": [ { "id": "ATPBN_ARATH", "url": "https://www.uniprot.org/uniprot/P83484", "type": "external" } ], "mass": 59713.0, "length": 556, "protein_name": "ATP synthase subunit beta-2, mitochondrial", "gene_name": "T2K12.9", "organism": "Arabidopsis", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "T2K12.9", "gene_names_refseq": "", "protein_names_uniprotkb": "ATP synthase subunit beta-2, mitochondrial; 7.1.2.2", "protein_names_refseq": "", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G08690)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "11130714;11743114;14593172;14671022;20466843;23328941;27862469;30833711", "class_list": "", "function": "Mitochondrial membrane ATP synthase (F(1)F(0) ATP synthase or Complex V) produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain. F-type ATPases consist of two structural domains, F(1) - containing the extramembraneous catalytic core, and F(0) - containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. Subunits alpha and beta form the catalytic core in F(1). Rotation of the central stalk against the surrounding alpha(3)beta(3) subunits leads to hydrolysis of ATP in three separate catalytic sites on the beta subunits., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 3, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q8RY05;Q8VX26;Q9C5A8;Q9C5B0", "ec_number_list": [ { "id": "7.1.2.2", "url": "https://www.rhea-db.org/rhea/?query=ec:7.1.2.2", "type": "external" } ], "go_molecular_function": "GO:0005524 ATP binding;GO:0016887 ATP hydrolysis activity;GO:0005507 copper ion binding;GO:0046933 proton-transporting ATP synthase activity, rotational mechanism;GO:0008266 poly(U) RNA binding", "go_cellular_component": "GO:0005730 nucleolus;GO:0005739 mitochondrion;GO:0005743 mitochondrial inner membrane;GO:0005886 plasma membrane;GO:0045259 proton-transporting ATP synthase complex", "go_biological_process": "GO:0042776 proton motive force-driven mitochondrial ATP synthesis", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "P83484-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "P92939-1", "uniprot_id": [ { "id": "ECA1_ARATH", "url": "https://www.uniprot.org/uniprot/P92939", "type": "external" } ], "mass": 116366.0, "length": 1061, "protein_name": "Calcium-transporting ATPase 1, endoplasmic reticulum-type", "gene_name": "ECA1", "organism": "Arabidopsis", "refseq_name": "ER-type Ca2+-ATPase 1", "refseq_ac": [ { "id": "NP_172259", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_172259", "type": "external" } ], "gene_names_uniprotkb": "ECA1; ACA3; F24B9.9", "gene_names_refseq": "ACA3; ARABIDOPSIS THALIANA ER-TYPE CA2+-ATPASE 1; ATECA1; ECA1; ER-TYPE CA2+-ATPASE; ER-type Ca2+-ATPase 1; F24B9.9; F24B9_9", "protein_names_uniprotkb": "Calcium-transporting ATPase 1, endoplasmic reticulum-type; 7.2.2.10", "protein_names_refseq": "ER-type Ca2+-ATPase 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G07810)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "11130712;12226493;25561503;27862469;9238019", "class_list": "", "function": "This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol to the endoplasmic reticulum lumen. Also regulates manganese ion homeostasis by pumping it into endomembrane compartments. Can also transport zinc., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 3, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O04987", "ec_number_list": [ { "id": "7.2.2.10", "url": "https://www.rhea-db.org/rhea/?query=ec:7.2.2.10", "type": "external" } ], "go_molecular_function": "GO:0005524 ATP binding;GO:0046872 metal ion binding;GO:0016887 ATP hydrolysis activity;GO:0005388 P-type calcium transporter activity", "go_cellular_component": "GO:0005576 extracellular region;GO:0005634 nucleus;GO:0005783 endoplasmic reticulum;GO:0016020 membrane;GO:0005789 endoplasmic reticulum membrane", "go_biological_process": "GO:0006816 calcium ion transport;GO:0006874 intracellular calcium ion homeostasis;GO:0010042 response to manganese ion;GO:0070588 calcium ion transmembrane transport", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "P92939-1", "record_type": "protein", "filter_code": "0000000.0000101.010000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "P92948-1", "uniprot_id": [ { "id": "CDC5L_ARATH", "url": "https://www.uniprot.org/uniprot/P92948", "type": "external" } ], "mass": 95767.0, "length": 844, "protein_name": "Cell division cycle 5-like protein", "gene_name": "CDC5", "organism": "Arabidopsis", "refseq_name": "cell division cycle 5", "refseq_ac": [ { "id": "NP_172448", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_172448", "type": "external" } ], "gene_names_uniprotkb": "CDC5; F21M12.15; MAC1; MYBCD5", "gene_names_refseq": "ARABIDOPSIS THALIANA CELL DIVISION CYCLE 5; ARABIDOPSIS THALIANA MYB DOMAIN CELL DIVISION CYCLE 5; ATCDC5; ATMYBCDC5; CDC5; F21M12.15; F21M12_15; cell division cycle 5", "protein_names_uniprotkb": "Cell division cycle 5-like protein; AtMYBCD5; Atypical R2R3-MYB transcription factor CDC5; Cdc5-like protein; MAC protein 1; MOS4-associated complex protein 1; Protein MYB DOMAIN CELL DIVISION CYCLE 5", "protein_names_refseq": "cell division cycle 5", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G09770)", "pathway_count": 1, "publication_count": 21, "publication_id_list": "11130712;11597504;14593172;16463103;17298883;17575050;18463617;19376835;19423640;19629177;20466843;21768351;23111157;23328941;23572148;23776212;25561503;27419465;27862469;30833711;8917598", "class_list": "", "function": "Component of the MAC complex that probably regulates defense responses through transcriptional control and thereby is essential for plant innate immunity. Possesses a sequence specific DNA sequence 'CTCAGCG' binding activity. Involved in mRNA splicing and cell cycle control. May also play a role in the response to DNA damage., [UniProtKB, PubMed, UniProtKB, PubMed, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 21, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "B9DFT0;O04498;Q6R0C5", "ec_number_list": [], "go_molecular_function": "GO:0003677 DNA binding;GO:0003700 DNA-binding transcription factor activity", "go_cellular_component": "GO:0005576 extracellular region;GO:0005634 nucleus;GO:0005681 spliceosomal complex;GO:0000974 Prp19 complex", "go_biological_process": "GO:0006281 DNA repair;GO:0006351 DNA-templated transcription;GO:0045087 innate immune response;GO:0006355 regulation of DNA-templated transcription;GO:0042742 defense response to bacterium", "synthesized_glycan_count": 0, "hit_score": 2.2, "record_id": "P92948-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000001001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "P92958-1", "uniprot_id": [ { "id": "KIN11_ARATH", "url": "https://www.uniprot.org/uniprot/P92958", "type": "external" } ], "mass": 58690.0, "length": 512, "protein_name": "SNF1-related protein kinase catalytic subunit alpha KIN11", "gene_name": "KIN11", "organism": "Arabidopsis", "refseq_name": "SNF1 kinase homolog 11", "refseq_ac": [ { "id": "NP_566843", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_566843", "type": "external" } ], "gene_names_uniprotkb": "KIN11; AKIN11; MXE2.16; SNR1; SNRK1.2", "gene_names_refseq": "AKIN11; ATKIN11; KIN11; SNF1 kinase homolog 11; SNF1-RELATED PROTEIN KINASE 1.2; SNF1-RELATED PROTEIN KINASE; SNRK1.2", "protein_names_uniprotkb": "SNF1-related protein kinase catalytic subunit alpha KIN11; 2.7.11.1; AKIN alpha-1; AKIN11; AKINalpha1; SNF1-related kinase 1.2; SnRK1.2", "protein_names_refseq": "SNF1 kinase homolog 11", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G29160)", "pathway_count": 1, "publication_count": 53, "publication_id_list": "10220464;10417704;10819329;10929106;11387208;11522840;12148529;12671096;12805596;14593172;15803412;17028154;17166759;17671505;19193861;19211700;19339507;20484986;23111157;23328941;23572148;23660473;23776212;24043427;24498147;24600465;24601666;25058458;25071807;25289013;25530701;25544057;25561503;25736509;25929516;26091701;26187819;26662259;27029354;27156455;27337039;27532006;27545962;27812990;27862469;28314829;28922765;29167316;29192025;29216370;29406622;29945970;30833711", "class_list": "", "function": "Catalytic subunit of the probable trimeric SNF1-related protein kinase (SnRK) complex, a central regulator of cellular energy homeostasis, which, in response to seemingly unrelated darkness, sugar and stress conditions, activates energy-producing pathways and inhibits energy-consuming processes. May play a role in a signal transduction cascade regulating gene expression and carbohydrate metabolism in higher plants. The SnRK complex may also be involved in the regulation of fatty acid synthesis by phosphorylation of acetyl-CoA carboxylase and in assimilation of nitrogen by phosphorylating nitrate reductase (PubMed:17671505). In vitro, KIN11 exhibits kinase activity on sucrose phosphate synthase and the kinase activity is inhibited by PRL1 (PubMed:10220464). May be a subunit of a SCF ubiquitin ligase complex and thus be involved in proteasomal ubiquitination (PubMed:11387208). Involved in innate antiviral defenses (PubMed:12671096). Phosphorylates REM4.1 in vitro (PubMed:25289013). Phosphorylates ADK2 in vitro (PubMed:24498147)., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 5, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A6XGQ9;P92968;Q3E7R4", "ec_number_list": [ { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.3.2.27", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.2.27", "type": "external" }, { "id": "2.7.10.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.-", "type": "external" }, { "id": "3.1.4.46", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.4.46", "type": "external" }, { "id": "2.7.11.25", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.25", "type": "external" }, { "id": "2.7.11.22", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.22", "type": "external" }, { "id": "2.7.10.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.1", "type": "external" }, { "id": "2.7.11.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.-", "type": "external" }, { "id": "2.7.11.24", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.24", "type": "external" }, { "id": "2.7.12.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.1", "type": "external" }, { "id": "2.7.11.23", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.23", "type": "external" }, { "id": "2.7.12.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.2", "type": "external" }, { "id": "2.7.-.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.-.-", "type": "external" }, { "id": "3.1.26.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.26.-", "type": "external" }, { "id": "3.1.3.16", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.16", "type": "external" }, { "id": "2.7.11.34", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.34", "type": "external" }, { "id": "4.6.1.2", "url": "https://www.rhea-db.org/rhea/?query=ec:4.6.1.2", "type": "external" } ], "go_molecular_function": "GO:0004672 protein kinase activity;GO:0004674 protein serine/threonine kinase activity;GO:0005524 ATP binding;GO:0019900 kinase binding;GO:0106310 protein serine kinase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005783 endoplasmic reticulum;GO:0005886 plasma membrane;GO:0009507 chloroplast", "go_biological_process": "GO:0006468 protein phosphorylation;GO:0006633 fatty acid biosynthetic process;GO:0046777 protein autophosphorylation;GO:0050688 regulation of defense response to virus;GO:0042128 nitrate assimilation", "synthesized_glycan_count": 0, "hit_score": 5.4, "record_id": "P92958-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "P92974-1", "uniprot_id": [ { "id": "UBE12_ARATH", "url": "https://www.uniprot.org/uniprot/P92974", "type": "external" } ], "mass": 119624.0, "length": 1077, "protein_name": "Ubiquitin-activating enzyme E1 2", "gene_name": "UBA2", "organism": "Arabidopsis", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "UBA2; MHF15.2", "gene_names_refseq": "", "protein_names_uniprotkb": "Ubiquitin-activating enzyme E1 2; 6.2.1.45; AtUBA2", "protein_names_refseq": "", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G06460)", "pathway_count": 1, "publication_count": 14, "publication_id_list": "17217463;18463617;19245862;19376835;20466843;23111157;23328941;23572148;23776212;25561503;27862469;30833711;9076989;9405937", "class_list": "", "function": "Activates ubiquitin by first adenylating its C-terminal glycine residue with ATP, and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding a ubiquitin-E1 thioester and free AMP., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 4, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0005524 ATP binding;GO:0004842 ubiquitin-protein transferase activity;GO:0004839 ubiquitin activating enzyme activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm", "go_biological_process": "GO:0006974 DNA damage response;GO:0016567 protein ubiquitination;GO:0006511 ubiquitin-dependent protein catabolic process", "synthesized_glycan_count": 0, "hit_score": 1.5, "record_id": "P92974-1", "record_type": "protein", "filter_code": "0000000.0000101.010000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "P92978-1", "uniprot_id": [ { "id": "RAC11_ARATH", "url": "https://www.uniprot.org/uniprot/P92978", "type": "external" } ], "mass": 21619.0, "length": 197, "protein_name": "Rac-like GTP-binding protein ARAC11", "gene_name": "ARAC11", "organism": "Arabidopsis", "refseq_name": "RHO-related protein from plants 1", "refseq_ac": [ { "id": "NP_190698", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_190698", "type": "external" } ], "gene_names_uniprotkb": "ARAC11; F24M12.340; RAC11; ROP1", "gene_names_refseq": "ARABIDOPSIS THALIANA RHO-RELATED PROTEIN FROM PLANTS 1; ARAC11; ATRAC11; ATROP1; Arabidopsis RAC-like 11; RHO-related protein from plants 1; ROP1AT; ROP1", "protein_names_uniprotkb": "Rac-like GTP-binding protein ARAC11; 3.6.5.2; GTPase protein ROP1", "protein_names_refseq": "RHO-related protein from plants 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G51300)", "pathway_count": 1, "publication_count": 11, "publication_id_list": "11102387;11130713;11283335;14593172;18621982;19825600;20832900;23024212;26091701;27862469;9765526", "class_list": "", "function": "Inactive GDP-bound Rho GTPases reside in the cytosol, are found in a complex with Rho GDP-dissociation inhibitors (Rho GDIs), and are released from the GDI protein in order to translocate to membranes upon activation., [UniProtKB]; May be involved in cell polarity control during the actin-dependent tip growth of pollen tubes. May regulate callose synthase 1 (CALS1) activity through the interaction with UGT1., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 3, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [ { "id": "3.6.5.2", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.5.2", "type": "external" }, { "id": "3.6.5.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.5.-", "type": "external" }, { "id": "3.6.5.3", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.5.3", "type": "external" }, { "id": "3.6.5.4", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.5.4", "type": "external" }, { "id": "3.6.5.5", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.5.5", "type": "external" }, { "id": "3.6.5.n1", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.5.n1", "type": "external" } ], "go_molecular_function": "GO:0003924 GTPase activity;GO:0005525 GTP binding;GO:0019901 protein kinase binding;GO:0032794 GTPase activating protein binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005730 nucleolus;GO:0005737 cytoplasm;GO:0005819 spindle;GO:0005856 cytoskeleton", "go_biological_process": "GO:0007015 actin filament organization;GO:0007165 signal transduction;GO:0030834 regulation of actin filament depolymerization;GO:0032956 regulation of actin cytoskeleton organization;GO:0007264 small GTPase-mediated signal transduction", "synthesized_glycan_count": 0, "hit_score": 1.2, "record_id": "P92978-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "P92979-1", "uniprot_id": [ { "id": "APR1_ARATH", "url": "https://www.uniprot.org/uniprot/P92979", "type": "external" } ], "mass": 51714.0, "length": 465, "protein_name": "5'-adenylylsulfate reductase 1, chloroplastic", "gene_name": "APR1", "organism": "Arabidopsis", "refseq_name": "APS reductase 1", "refseq_ac": [ { "id": "NP_192370", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_192370", "type": "external" } ], "gene_names_uniprotkb": "APR1; F4H6.13; PRH19", "gene_names_refseq": "3'-PHOSPHOADENOSINE 5'-PHOSPHOSULFATE REDUCTASE; APR1; APR; APS REDUCTASE; APS reductase 1; ATAPR1; F4H6.13; F4H6_13; PAPS REDUCTASE HOMOLOG 19; PRH19", "protein_names_uniprotkb": "5'-adenylylsulfate reductase 1, chloroplastic; 1.8.4.9; 3'-phosphoadenosine-5'-phosphosulfate reductase homolog 19; APS sulfotransferase 1; Adenosine 5'-phosphosulfate 5'-adenylylsulfate sulfotransferase 1; PAPS reductase homolog 19; Prh-19; Thioredoxin-independent APS reductase 1", "protein_names_refseq": "APS reductase 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G04610)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "10617198;14593172;16502469;27862469;8917599;8917600;9653199", "class_list": "", "function": "Reduces sulfate for Cys biosynthesis. Substrate preference is adenosine-5'-phosphosulfate (APS) >> 3'-phosphoadenosine-5'-phosphosulfate (PAPS). Uses glutathione or DTT as source of protons., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O48886;Q39248;Q56ZY2;Q8LA60", "ec_number_list": [ { "id": "1.8.4.9", "url": "https://www.rhea-db.org/rhea/?query=ec:1.8.4.9", "type": "external" } ], "go_molecular_function": "GO:0046872 metal ion binding;GO:0051539 4 iron, 4 sulfur cluster binding;GO:0004604 phosphoadenylyl-sulfate reductase (thioredoxin) activity;GO:0009973 adenylyl-sulfate reductase activity;GO:0033741 adenylyl-sulfate reductase (glutathione) activity", "go_cellular_component": "GO:0009507 chloroplast;GO:0009536 plastid;GO:0009570 chloroplast stroma", "go_biological_process": "GO:0019344 cysteine biosynthetic process;GO:0000103 sulfate assimilation;GO:0019379 sulfate assimilation, phosphoadenylyl sulfate reduction by phosphoadenylyl-sulfate reductase (thioredoxin)", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "P92979-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "P92983-1", "uniprot_id": [ { "id": "PROD1_ARATH", "url": "https://www.uniprot.org/uniprot/P92983", "type": "external" } ], "mass": 54956.0, "length": 499, "protein_name": "Proline dehydrogenase 1, mitochondrial", "gene_name": "POX1", "organism": "Arabidopsis", "refseq_name": "Methylenetetrahydrofolate reductase family protein", "refseq_ac": [ { "id": "NP_001319672", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001319672", "type": "external" } ], "gene_names_uniprotkb": "POX1; ERD5; MIF6.16; MIF6.19; PRO1; PRODH1", "gene_names_refseq": "ARABIDOPSIS THALIANA PROLINE OXIDASE; AT-POX; ATPDH; ATPOX; EARLY RESPONSIVE TO DEHYDRATION 5; ERD5; PDH1; PRO1; PRODH; PROLINE DEHYDROGENASE; PROLINE OXIDASE; proline dehydrogenase 1", "protein_names_uniprotkb": "Proline dehydrogenase 1, mitochondrial; 1.5.5.2; Osmotic stress-induced proline dehydrogenase; Proline oxidase; Protein EARLY RESPONSIVE TO DEHYDRATION 5", "protein_names_refseq": "Methylenetetrahydrofolate reductase family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G30775)", "pathway_count": 1, "publication_count": 13, "publication_id_list": "10819329;10907853;12773641;14593172;16810321;17106685;20403182;25732537;27862469;8710950;8776899;9003320;9847097", "class_list": "", "function": "Converts proline to delta-1-pyrroline-5-carboxylate., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "P92945;Q8VXV1;Q944L2;Q96281", "ec_number_list": [ { "id": "1.5.5.2", "url": "https://www.rhea-db.org/rhea/?query=ec:1.5.5.2", "type": "external" } ], "go_molecular_function": "GO:0071949 FAD binding;GO:0004657 proline dehydrogenase activity", "go_cellular_component": "GO:0005739 mitochondrion", "go_biological_process": "GO:0006979 response to oxidative stress;GO:0071456 cellular response to hypoxia;GO:0042742 defense response to bacterium;GO:0009414 response to water deprivation;GO:0010133 L-proline catabolic process to L-glutamate", "synthesized_glycan_count": 0, "hit_score": 1.4, "record_id": "P92983-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "P92990-1", "uniprot_id": [ { "id": "PGL3_ARATH", "url": "https://www.uniprot.org/uniprot/P92990", "type": "external" } ], "mass": 68060.0, "length": 626, "protein_name": "Polygalacturonase 1 beta-like protein 3", "gene_name": "PGL3", "organism": "Arabidopsis", "refseq_name": "polygalacturonase 2", "refseq_ac": [ { "id": "NP_001185361", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001185361", "type": "external" } ], "gene_names_uniprotkb": "PGL3; F17O7.9; JP650; PG2", "gene_names_refseq": "PG2; polygalacturonase 2", "protein_names_uniprotkb": "Polygalacturonase 1 beta-like protein 3; Aromatic-rich glycoprotein JP650; AtPGL3; PG1beta-like protein 3; Polygalacturonase 2; Probable polygalacturonase non-catalytic subunit JP650", "protein_names_refseq": "polygalacturonase 2", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G70370)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "11130712;14593172;19639386;26106400;27862469;9790599", "class_list": "", "function": "Involved in cell size determination. May serve as a chaperone for expansins through the secretory pathway., [UniProtKB, PubMed]", "predicted_glycosites": 6, "predicted_n_glycosites": 6, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 6, "binding_glycan_count": 0, "secondary_ac_list": "O64599;Q0WV83;Q8H7B8;Q93ZQ4", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005576 extracellular region;GO:0009505 plant-type cell wall;GO:0048046 apoplast", "go_biological_process": "GO:0009827 plant-type cell wall modification;GO:0042547 cell wall modification involved in multidimensional cell growth", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "P92990-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000010000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "P92994-1", "uniprot_id": [ { "id": "TCMO_ARATH", "url": "https://www.uniprot.org/uniprot/P92994", "type": "external" } ], "mass": 57792.0, "length": 505, "protein_name": "Trans-cinnamate 4-monooxygenase", "gene_name": "CYP73A5", "organism": "Arabidopsis", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "CYP73A5; CYP73; REF3; T6B20.16", "gene_names_refseq": "", "protein_names_uniprotkb": "Trans-cinnamate 4-monooxygenase; 1.14.14.91; C4H; CA4H; Cinnamic acid 4-hydroxylase; Cytochrome P450 73; Cytochrome P450C4H; Protein REDUCED EPIDERMAL FLUORESCENCE 3", "protein_names_refseq": "", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G30490)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "10617197;14593172;19682296;23473981;27862469;9085570;9085571", "class_list": "", "function": "Catalyzes the first oxidative step of the phenylpropanoid pathway in higher plants by transforming trans-cinnamate into p-coumarate (By similarity). The compounds formed by this pathway are essential components for lignification, pollination, and defense against ultraviolet light, predators and pathogens (PubMed:19682296)., [UniProtKB, PubMed, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 3, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O04995;O49834;P92993", "ec_number_list": [ { "id": "1.14.14.91", "url": "https://www.rhea-db.org/rhea/?query=ec:1.14.14.91", "type": "external" } ], "go_molecular_function": "GO:0005506 iron ion binding;GO:0042802 identical protein binding;GO:0020037 heme binding;GO:0016710 trans-cinnamate 4-monooxygenase activity", "go_cellular_component": "GO:0005576 extracellular region;GO:0005777 peroxisome;GO:0005783 endoplasmic reticulum;GO:0005794 Golgi apparatus;GO:0005886 plasma membrane", "go_biological_process": "GO:0009611 response to wounding;GO:0032502 developmental process;GO:0006744 ubiquinone biosynthetic process;GO:0009416 response to light stimulus;GO:0009698 phenylpropanoid metabolic process", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "P92994-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "P93003-1", "uniprot_id": [ { "id": "TFL1_ARATH", "url": "https://www.uniprot.org/uniprot/P93003", "type": "external" } ], "mass": 20158.0, "length": 177, "protein_name": "Protein TERMINAL FLOWER 1", "gene_name": "TFL1", "organism": "Arabidopsis", "refseq_name": "PEBP (phosphatidylethanolamine-binding protein) family protein", "refseq_ac": [ { "id": "NP_196004", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_196004", "type": "external" } ], "gene_names_uniprotkb": "TFL1; F8F6_50", "gene_names_refseq": "MED24.6; TERMINAL FLOWER 1; TFL-1; TFL1", "protein_names_uniprotkb": "Protein TERMINAL FLOWER 1", "protein_names_refseq": "PEBP (phosphatidylethanolamine-binding protein) family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G03840)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "11130714;15894619;27862469;8974397;9108281;9330910", "class_list": "", "function": "Controls inflorescence meristem identity and is required for maintenance of an indeterminate inflorescence. Prevents the expression of 'APETALA1' and 'LEAFY'. Also plays a role in the regulation of the time of flowering in the long-day flowering pathway. May form complexes with phosphorylated ligands by interfering with kinases and their effectors (By similarity)., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 7, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O04756;O04757;O04758", "ec_number_list": [], "go_molecular_function": "GO:0003712 transcription coregulator activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005886 plasma membrane;GO:0031982 vesicle;GO:0005773 vacuole", "go_biological_process": "GO:0030154 cell differentiation;GO:0009744 response to sucrose;GO:0006623 protein targeting to vacuole;GO:0009908 flower development;GO:0009910 negative regulation of flower development", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "P93003-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "P93004-1", "uniprot_id": [ { "id": "PIP27_ARATH", "url": "https://www.uniprot.org/uniprot/P93004", "type": "external" } ], "mass": 29743.0, "length": 280, "protein_name": "Aquaporin PIP2-7", "gene_name": "PIP2-7", "organism": "Arabidopsis", "refseq_name": "plasma membrane intrinsic protein 3", "refseq_ac": [ { "id": "NP_001190920", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001190920", "type": "external" } ], "gene_names_uniprotkb": "PIP2-7; M4E13.150; PIP3; SIMIP", "gene_names_refseq": "7; PIP2; PIP3A; PIP3; PLASMA MEMBRANE INTRINSIC PROTEIN 2; PLASMA MEMBRANE INTRINSIC PROTEIN 3A; PLASMA MEMBRANE INTRINSIC PROTEIN 3; SIMIP; T12J5.9; plasma membrane intrinsic protein 3", "protein_names_uniprotkb": "Aquaporin PIP2-7; 7; At-PIP3; AtPIP2; Plasma membrane intrinsic protein 2-7; Plasma membrane intrinsic protein 3; Salt stress-induced major intrinsic protein", "protein_names_refseq": "plasma membrane intrinsic protein 3", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G35100)", "pathway_count": 1, "publication_count": 32, "publication_id_list": "10102577;10617198;10737809;11806824;14593172;15060130;15308754;17651370;18433157;18463617;18686298;19376835;20466843;20733066;21768351;22060019;23111157;23572148;23660473;23776212;23820729;24924143;25082856;25561503;26091701;26187819;27419465;27862469;28011693;29167316;30833711;9276952", "class_list": "", "function": "Water channel required to facilitate the transport of water across cell membrane. May be involved in the osmoregulation in plants under high osmotic stress such as under a high salt condition., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 5, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O22332;O49616", "ec_number_list": [], "go_molecular_function": "GO:0003729 mRNA binding;GO:0015250 water channel activity", "go_cellular_component": "GO:0005886 plasma membrane;GO:0005773 vacuole;GO:0009506 plasmodesma", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 3.3, "record_id": "P93004-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "P93006-1", "uniprot_id": [ { "id": "P2C27_ARATH", "url": "https://www.uniprot.org/uniprot/P93006", "type": "external" } ], "mass": 41757.0, "length": 380, "protein_name": "Probable protein phosphatase 2C 27", "gene_name": "PP2C27", "organism": "Arabidopsis", "refseq_name": "Protein phosphatase 2C family protein", "refseq_ac": [ { "id": "NP_180926", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_180926", "type": "external" } ], "gene_names_uniprotkb": "PP2C27; PP2CG1; T1B8.2", "gene_names_refseq": "PP2CG1; T1B8.2; T1B8_2; protein phosphatase 2C G Group 1", "protein_names_uniprotkb": "Probable protein phosphatase 2C 27; 3.1.3.16; AtPP2C27; AtPP2CG1; Probable protein phosphatase 2C G group 1", "protein_names_refseq": "Protein phosphatase 2C family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G33700)", "pathway_count": 1, "publication_count": 11, "publication_id_list": "10617197;14593172;19021904;22627139;23572148;23660473;23776212;25561503;26091701;27862469;30833711", "class_list": "", "function": "Confers salt tolerance by triggering the expression of stress-responsive genes., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [ { "id": "3.1.3.16", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.16", "type": "external" }, { "id": "3.1.3.27", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.27", "type": "external" }, { "id": "3.1.3.48", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.48", "type": "external" }, { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.7.13.3", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.13.3", "type": "external" } ], "go_molecular_function": "GO:0046872 metal ion binding;GO:0004722 protein serine/threonine phosphatase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0009507 chloroplast", "go_biological_process": "GO:0007165 signal transduction;GO:0009651 response to salt stress;GO:0009414 response to water deprivation;GO:0009737 response to abscisic acid", "synthesized_glycan_count": 0, "hit_score": 1.2, "record_id": "P93006-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "P93014-1", "uniprot_id": [ { "id": "RR5_ARATH", "url": "https://www.uniprot.org/uniprot/P93014", "type": "external" } ], "mass": 32645.0, "length": 303, "protein_name": "Small ribosomal subunit protein uS5c", "gene_name": "rps5", "organism": "Arabidopsis", "refseq_name": "Ribosomal protein S5 family protein", "refseq_ac": [ { "id": "NP_180936", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_180936", "type": "external" } ], "gene_names_uniprotkb": "rps5; T1B8.10", "gene_names_refseq": "EMB3113; EMBRYO DEFECTIVE 3113; T1B8.10; T1B8_10", "protein_names_uniprotkb": "Small ribosomal subunit protein uS5c; 30S ribosomal protein S5, chloroplastic", "protein_names_refseq": "Ribosomal protein S5 family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G33800)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "10617197;14593172;27862469;36423343", "class_list": "", "function": "Binds directly to 16S ribosomal RNA., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0003729 mRNA binding;GO:0019843 rRNA binding;GO:0003735 structural constituent of ribosome", "go_cellular_component": "GO:0005763 mitochondrial small ribosomal subunit;GO:0005634 nucleus;GO:0005783 endoplasmic reticulum;GO:0009535 chloroplast thylakoid membrane;GO:0009507 chloroplast", "go_biological_process": "GO:0009409 response to cold;GO:0006412 translation;GO:0009955 adaxial/abaxial pattern specification;GO:0032544 plastid translation;GO:1901259 chloroplast rRNA processing", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "P93014-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "P93015-1", "uniprot_id": [ { "id": "SPL3_ARATH", "url": "https://www.uniprot.org/uniprot/P93015", "type": "external" } ], "mass": 15304.0, "length": 131, "protein_name": "Squamosa promoter-binding-like protein 3", "gene_name": "SPL3", "organism": "Arabidopsis", "refseq_name": "squamosa promoter binding protein-like 3", "refseq_ac": [ { "id": "NP_565771", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_565771", "type": "external" } ], "gene_names_uniprotkb": "SPL3; T1B8.11", "gene_names_refseq": "SPL3; T1B8.11; T1B8_11; squamosa promoter binding protein-like 3", "protein_names_uniprotkb": "Squamosa promoter-binding-like protein 3", "protein_names_refseq": "squamosa promoter binding protein-like 3", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G33810)", "pathway_count": 1, "publication_count": 12, "publication_id_list": "10524240;10617197;11910074;12202040;14573523;14593172;16095614;16914499;24601666;27862469;29167316;9301089", "class_list": "", "function": "Trans-acting factor that binds specifically to the consensus nucleotide sequence 5'-TNCGTACAA-3' of AP1 promoter. Binds specifically to the 5'-GTAC-3' core sequence. Promotes both vegetative phase change and flowering. Regulates phase-specific patterns of leaf epidermal differentiation and flowering time, but does not seem to affect leaf shape., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 5, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q8LGE8;Q9LF84", "ec_number_list": [], "go_molecular_function": "GO:0003677 DNA binding;GO:0003700 DNA-binding transcription factor activity;GO:0008270 zinc ion binding;GO:0000976 transcription cis-regulatory region binding;GO:0001216 DNA-binding transcription activator activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0030154 cell differentiation;GO:0009908 flower development;GO:0009911 positive regulation of flower development;GO:0010228 vegetative to reproductive phase transition of meristem", "synthesized_glycan_count": 0, "hit_score": 1.3, "record_id": "P93015-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "P93026-1", "uniprot_id": [ { "id": "VSR1_ARATH", "url": "https://www.uniprot.org/uniprot/P93026", "type": "external" } ], "mass": 68992.0, "length": 623, "protein_name": "Vacuolar-sorting receptor 1", "gene_name": "VSR1", "organism": "Arabidopsis", "refseq_name": "vacuolar sorting receptor homolog 1", "refseq_ac": [ { "id": "NP_190853", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_190853", "type": "external" } ], "gene_names_uniprotkb": "VSR1; BP80B; ELP1; ELP; F8J2.20", "gene_names_refseq": "1; ARABIDOPSIS THALIANA EPIDERMAL GROWTH FACTOR RECEPTOR-LIKE PROTEIN; ATELP1; ATELP; ATVSR1; BP-80; BP80-1; BP80B; BP80; GFS1; Green fluorescent seed 1; VACUOLAR SORTING RECEPTOR 1; VSR-1; VSR1; binding protein of 80 kDa 1; vacuolar sorting receptor homolog 1", "protein_names_uniprotkb": "Vacuolar-sorting receptor 1; AtBP80b; AtELP1; AtELP; AtVSR1; BP80-like protein b; Epidermal growth factor receptor-like protein 1; Spot 3 protein", "protein_names_refseq": "vacuolar sorting receptor homolog 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G52850)", "pathway_count": 1, "publication_count": 13, "publication_id_list": "10397763;10561538;10871276;11130713;12154135;12493849;14593172;14657332;16905657;27862469;9159954;9306690;9707576", "class_list": "", "function": "Vacuolar-sorting receptor (VSR) involved in clathrin-coated vesicles sorting from Golgi apparatus to vacuoles. Required for the sorting of 12S globulin, 2S albumin and maybe other seed storage proteins to protein storage vacuoles (PSVs) in seeds. May also be implicated in targeting N-terminal propeptide containing proteins to lytic vacuoles., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 3, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 1, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 3, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 3, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 1, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 0, "biomarker_type": "", "glycan_count": 1, "disease_count": 0, "glyco_site_count": 3, "binding_glycan_count": 0, "secondary_ac_list": "P94037;Q94AC0", "ec_number_list": [], "go_molecular_function": "GO:0005509 calcium ion binding;GO:0009940 amino-terminal vacuolar sorting propeptide binding", "go_cellular_component": "GO:0000139 Golgi membrane;GO:0005576 extracellular region;GO:0005768 endosome;GO:0005783 endoplasmic reticulum;GO:0005794 Golgi apparatus", "go_biological_process": "GO:0007034 vacuolar transport;GO:0006623 protein targeting to vacuole;GO:0006896 Golgi to vacuole transport", "synthesized_glycan_count": 0, "hit_score": 1.8, "record_id": "P93026-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.1000000000000.100.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "P93028-1", "uniprot_id": [ { "id": "UBE11_ARATH", "url": "https://www.uniprot.org/uniprot/P93028", "type": "external" } ], "mass": 120251.0, "length": 1080, "protein_name": "Ubiquitin-activating enzyme E1 1", "gene_name": "UBA1", "organism": "Arabidopsis", "refseq_name": "ubiquitin-activating enzyme 1", "refseq_ac": [ { "id": "NP_565693", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_565693", "type": "external" } ], "gene_names_uniprotkb": "UBA1; MOS5; T27E13.15", "gene_names_refseq": "ATUBA1; MODIFIER OF SNC1 5; MOS5; T27E13.15; T27E13_15; UBA1; ubiquitin-activating enzyme 1", "protein_names_uniprotkb": "Ubiquitin-activating enzyme E1 1; 6.2.1.45; AtUBA1; Protein MODIFIER OF SNC1 5", "protein_names_refseq": "ubiquitin-activating enzyme 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G30110)", "pathway_count": 1, "publication_count": 11, "publication_id_list": "10617197;14593172;17217463;17272265;20466843;23111157;23776212;25561503;27862469;28011693;9076989", "class_list": "", "function": "Activates ubiquitin by first adenylating its C-terminal glycine residue with ATP, and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding a ubiquitin-E1 thioester and free AMP., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 5, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q8RX82", "ec_number_list": [], "go_molecular_function": "GO:0005524 ATP binding;GO:0004842 ubiquitin-protein transferase activity;GO:0004839 ubiquitin activating enzyme activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005777 peroxisome;GO:0005829 cytosol;GO:0009506 plasmodesma", "go_biological_process": "GO:0051707 response to other organism;GO:0006974 DNA damage response;GO:0016567 protein ubiquitination;GO:0006511 ubiquitin-dependent protein catabolic process", "synthesized_glycan_count": 0, "hit_score": 1.2, "record_id": "P93028-1", "record_type": "protein", "filter_code": "0000000.0100101.010000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "P93030-1", "uniprot_id": [ { "id": "RMA2_ARATH", "url": "https://www.uniprot.org/uniprot/P93030", "type": "external" } ], "mass": 22178.0, "length": 193, "protein_name": "E3 ubiquitin-protein ligase RMA2", "gene_name": "RMA2", "organism": "Arabidopsis", "refseq_name": "RING membrane-anchor 2", "refseq_ac": [ { "id": "NP_194556", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_194556", "type": "external" } ], "gene_names_uniprotkb": "RMA2; A-RZF; F26K10.15", "gene_names_refseq": "ATRMA2; F26K10.150; F26K10_150; RING membrane-anchor 2; RMA2", "protein_names_uniprotkb": "E3 ubiquitin-protein ligase RMA2; 2.3.2.27; Protein RING membrane-anchor 2; RING-type E3 ubiquitin transferase RMA2", "protein_names_refseq": "RING membrane-anchor 2", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G28270)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "10617198;14593172;19224217;19234086;20152813;27862469;9322769", "class_list": "", "function": "E3 ubiquitin-protein ligase that promotes the ubiquitination and proteasomal degradation of the auxin-binding protein ERABP1., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0008270 zinc ion binding;GO:0061630 ubiquitin protein ligase activity;GO:0004842 ubiquitin-protein transferase activity;GO:0044390 ubiquitin-like protein conjugating enzyme binding", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005783 endoplasmic reticulum;GO:0005789 endoplasmic reticulum membrane", "go_biological_process": "GO:0016567 protein ubiquitination;GO:0006511 ubiquitin-dependent protein catabolic process;GO:0036503 ERAD pathway", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "P93030-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "P93031-1", "uniprot_id": [ { "id": "GMD2_ARATH", "url": "https://www.uniprot.org/uniprot/P93031", "type": "external" } ], "mass": 41961.0, "length": 373, "protein_name": "GDP-mannose 4,6 dehydratase 2", "gene_name": "MUR1", "organism": "Arabidopsis", "refseq_name": "NAD(P)-binding Rossmann-fold superfamily protein", "refseq_ac": [ { "id": "NP_190685", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_190685", "type": "external" } ], "gene_names_uniprotkb": "MUR1; F24M12.200; GMD2", "gene_names_refseq": "6-DEHYDRATASE 2; 6-DEHYDRATASE; GDP-D-MANNOSE-4; GMD2; MUR1; MURUS 1; MUR_1", "protein_names_uniprotkb": "GDP-mannose 4,6 dehydratase 2; 4.2.1.47; GDP-D-mannose dehydratase 2; GMD 2", "protein_names_refseq": "NAD(P)-binding Rossmann-fold superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G51160)", "pathway_count": 1, "publication_count": 18, "publication_id_list": "11130713;12501186;12805618;12881408;18433157;18463617;19376835;20466843;21768351;23111157;23660473;23776212;25561503;27532006;27862469;28011693;30833711;9050909", "class_list": "", "function": "Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6-deoxy-D-mannose., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 5, "reported_mutagensis": 7, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q1ECM4;Q8LFY4;Q9SD30", "ec_number_list": [ { "id": "4.2.1.47", "url": "https://www.rhea-db.org/rhea/?query=ec:4.2.1.47", "type": "external" } ], "go_molecular_function": "GO:0008446 GDP-mannose 4,6-dehydratase activity;GO:0005525 GTP binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005829 cytosol", "go_biological_process": "GO:0042351 'de novo' GDP-L-fucose biosynthetic process;GO:0009826 unidimensional cell growth", "synthesized_glycan_count": 0, "hit_score": 1.9, "record_id": "P93031-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "P93033-1", "uniprot_id": [ { "id": "FUM1_ARATH", "url": "https://www.uniprot.org/uniprot/P93033", "type": "external" } ], "mass": 53000.0, "length": 492, "protein_name": "Fumarate hydratase 1, mitochondrial", "gene_name": "FUM1", "organism": "Arabidopsis", "refseq_name": "fumarase 1", "refseq_ac": [ { "id": "NP_001078075", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001078075", "type": "external" } ], "gene_names_uniprotkb": "FUM1; T30B22.19", "gene_names_refseq": "FUM1; T30B22.19; fumarase 1", "protein_names_uniprotkb": "Fumarate hydratase 1, mitochondrial; 4.2.1.2; AtFUM1; Fumarase 1", "protein_names_refseq": "fumarase 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G47510)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "10617197;14593172;14671022;20202172;25561503;25732537;27862469;29688630", "class_list": "", "function": "Catalyzes the reversible stereospecific interconversion of fumarate to L-malate (PubMed:29688630). Catalyzes the hydration of fumarate to L-malate in the tricarboxylic acid (TCA) cycle to facilitate a transition step in the production of energy in the form of NADH (By similarity)., [UniProtKB, UniProtKB, UniProtKB, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "O24649", "ec_number_list": [ { "id": "4.2.1.2", "url": "https://www.rhea-db.org/rhea/?query=ec:4.2.1.2", "type": "external" } ], "go_molecular_function": "GO:0004333 fumarate hydratase activity", "go_cellular_component": "GO:0005739 mitochondrion;GO:0005829 cytosol", "go_biological_process": "GO:0006106 fumarate metabolic process;GO:0006099 tricarboxylic acid cycle;GO:0051262 protein tetramerization;GO:0006108 malate metabolic process;GO:0048868 pollen tube development", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "P93033-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000001001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "P93042-1", "uniprot_id": [ { "id": "RHD3_ARATH", "url": "https://www.uniprot.org/uniprot/P93042", "type": "external" } ], "mass": 89092.0, "length": 802, "protein_name": "Protein ROOT HAIR DEFECTIVE 3", "gene_name": "RHD3", "organism": "Arabidopsis", "refseq_name": "Root hair defective 3 GTP-binding protein (RHD3)", "refseq_ac": [ { "id": "NP_188003", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_188003", "type": "external" } ], "gene_names_uniprotkb": "RHD3; FRA4; MCP4.11", "gene_names_refseq": "GOLGI MUTANT 8; GOM8; RHD3; ROOT HAIR DEFECTIVE 3", "protein_names_uniprotkb": "Protein ROOT HAIR DEFECTIVE 3; 3.6.5.-; Protein FRAGILE FIBER 4; Protein SEY1 homolog 1", "protein_names_refseq": "Root hair defective 3 GTP-binding protein (RHD3)", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G13870)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "10819329;12068108;12844267;14593172;14731265;15908600;23111157;27862469;9084218;9087433", "class_list": "", "function": "Probable GTP-binding protein involved in cell wall expansion. Required for appropriate root and root hair cells enlargement. May inhibit vacuole enlargement during root hair cell expansion. Plays a role in cell wall biosynthesis and actin organization. Seems to act independently from auxin and ethylene pathways. May regulate membrane traffic from the Golgi apparatus towards the endoplasmic reticulum (ER)., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 3, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q0WL83;Q3EB66", "ec_number_list": [], "go_molecular_function": "GO:0003924 GTPase activity;GO:0005525 GTP binding", "go_cellular_component": "GO:0000139 Golgi membrane;GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005783 endoplasmic reticulum;GO:0005829 cytosol", "go_biological_process": "GO:0030036 actin cytoskeleton organization;GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport;GO:0016320 endoplasmic reticulum membrane fusion;GO:0009932 cell tip growth;GO:0009832 plant-type cell wall biogenesis", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "P93042-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "P93046-1", "uniprot_id": [ { "id": "XTH31_ARATH", "url": "https://www.uniprot.org/uniprot/P93046", "type": "external" } ], "mass": 33541.0, "length": 293, "protein_name": "Xyloglucan endotransglucosylase/hydrolase protein 31", "gene_name": "XTH31", "organism": "Arabidopsis", "refseq_name": "xyloglucan endo-transglycosylase-related 8", "refseq_ac": [ { "id": "NP_190085", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_190085", "type": "external" } ], "gene_names_uniprotkb": "XTH31; ATXG; F14D17.60; XTR8", "gene_names_refseq": "ATXTR8; AtXTH31; XTH31; XTR8; XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 31; xyloglucan endo-transglycosylase-related 8", "protein_names_uniprotkb": "Xyloglucan endotransglucosylase/hydrolase protein 31; 2.4.1.207; 3.2.1.151; At-XTH31; AtXTR8; XTH-31", "protein_names_refseq": "xyloglucan endo-transglycosylase-related 8", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G44990)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "11130713;11673616;12514239;14593172;21285327;23104861;23204407;24948835;25446234;27862469", "class_list": "glycogene;glycosylhydrolase", "function": "Catalyzes xyloglucan endohydrolysis (XEH) and/or endotransglycosylation (XET). Cleaves and religates xyloglucan polymers, an essential constituent of the primary cell wall, and thereby participates in cell wall construction of growing tissues. Involved in the accumulation of hemicelluloses. Has a high XEH activity and only a slight XET activity in vitro, but the main in planta activity seems to be XET, thus controlling aluminum sensitivity (PubMed:23104861, PubMed:23204407, PubMed:25446234). Acceptor preferences are XXXGol = XXFGol > XXLGol > XLLGol = XLFGol (PubMed:25446234)., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9LXH6", "ec_number_list": [], "go_molecular_function": "GO:0030247 polysaccharide binding;GO:0016762 xyloglucan:xyloglucosyl transferase activity;GO:0033946 xyloglucan-specific endo-beta-1,4-glucanase activity", "go_cellular_component": "GO:0005576 extracellular region;GO:0005886 plasma membrane;GO:0048046 apoplast", "go_biological_process": "GO:0009408 response to heat;GO:0016998 cell wall macromolecule catabolic process;GO:0042546 cell wall biogenesis;GO:0071555 cell wall organization;GO:0010411 xyloglucan metabolic process", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "P93046-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.10100", "kg_view_protein": true }, { "uniprot_canonical_ac": "P93286-1", "uniprot_id": [ { "id": "CCMFC_ARATH", "url": "https://www.uniprot.org/uniprot/P93286", "type": "external" } ], "mass": 50558.0, "length": 442, "protein_name": "Cytochrome c biogenesis CcmF C-terminal-like mitochondrial protein", "gene_name": "CCMFC", "organism": "Arabidopsis", "refseq_name": "cytochrome c biogenesis FC", "refseq_ac": [ { "id": "YP_009472113", "url": "https://www.ncbi.nlm.nih.gov/protein/YP_009472113", "type": "external" } ], "gene_names_uniprotkb": "CCMFC; CCB452; CCB6C", "gene_names_refseq": "ccb452; ccb6c; ccmFC", "protein_names_uniprotkb": "Cytochrome c biogenesis CcmF C-terminal-like mitochondrial protein; Cytochrome c biogenesis orf452", "protein_names_refseq": "cytochrome c biogenesis FC", "tax_id": 3702, "disease": "", "pathway": "", "pathway_count": 0, "publication_count": 5, "publication_id_list": "10611383;10617197;18644794;29519893;8988169", "class_list": "", "function": "Forms a complex with CCMFN1, CCMFN2 and CCMH that performs the assembly of heme with c-type apocytochromes in mitochondria., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A2P2CLG0", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005739 mitochondrion;GO:0005743 mitochondrial inner membrane", "go_biological_process": "GO:0017004 cytochrome complex assembly", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "P93286-1", "record_type": "protein", "filter_code": "0000000.0000100.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "P93735-1", "uniprot_id": [ { "id": "ELIP1_ARATH", "url": "https://www.uniprot.org/uniprot/P93735", "type": "external" } ], "mass": 20325.0, "length": 195, "protein_name": "Early light-induced protein 1, chloroplastic", "gene_name": "ELIP1", "organism": "Arabidopsis", "refseq_name": "Chlorophyll A-B binding family protein", "refseq_ac": [ { "id": "NP_188923", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_188923", "type": "external" } ], "gene_names_uniprotkb": "ELIP1; ELIP; MWI23.21", "gene_names_refseq": "EARLY LIGHT-INDUCABLE PROTEIN; ELIP1; ELIP", "protein_names_uniprotkb": "Early light-induced protein 1, chloroplastic", "protein_names_refseq": "Chlorophyll A-B binding family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G22840)", "pathway_count": 1, "publication_count": 12, "publication_id_list": "10725357;10819329;11706180;12676998;14593172;16028115;16778010;16806197;16829586;21299564;27862469;31604812", "class_list": "", "function": "Prevents excess accumulation of free chlorophyll by inhibiting the entire chlorophyll biosynthesis pathway (e.g. 5-aminolevulinate synthesis and Mg-protoporphyrin IX chelatase activity), and hence prevent photooxidative stress (By similarity). Probably involved in the integration of pigments into the mature light-harvesting pigment-protein complexes. Light-harvesting chlorophyll (LHC) a/b-binding protein required to ensure a high rate of chlorophyll accumulation during deetiolation in continuous high light. Involved in seed germination. May fulfill a photoprotective functions., [UniProtKB, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0009535 chloroplast thylakoid membrane;GO:0009507 chloroplast;GO:0009522 photosystem I;GO:0009523 photosystem II", "go_biological_process": "GO:0009409 response to cold;GO:0034605 cellular response to heat;GO:0071486 cellular response to high light intensity;GO:0009416 response to light stimulus;GO:0071492 cellular response to UV-A", "synthesized_glycan_count": 0, "hit_score": 1.3, "record_id": "P93735-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "P93736-1", "uniprot_id": [ { "id": "SYVM1_ARATH", "url": "https://www.uniprot.org/uniprot/P93736", "type": "external" } ], "mass": 125926.0, "length": 1108, "protein_name": "Valine--tRNA ligase, mitochondrial 1", "gene_name": "TWN2", "organism": "Arabidopsis", "refseq_name": "valyl-tRNA synthetase / valine-tRNA ligase (VALRS)", "refseq_ac": [ { "id": "NP_172913", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_172913", "type": "external" } ], "gene_names_uniprotkb": "TWN2; T5E21.11", "gene_names_refseq": "T5E21.11; T5E21_11; TWIN 2; TWN2; VALRS; VALYL TRNA SYNTHETASE", "protein_names_uniprotkb": "Valine--tRNA ligase, mitochondrial 1; 6.1.1.9; AtSYV1; Protein TWIN 2; ValRS; Valyl-tRNA synthetase", "protein_names_refseq": "valyl-tRNA synthetase / valine-tRNA ligase (VALRS)", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G14610)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "10583378;11130712;14593172;23572148;25561503;25732537;27862469;9207094", "class_list": "", "function": "Required for embryo development and seed viability., [UniProtKB, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "Q6NPT2;Q8W4A8;Q9MA22", "ec_number_list": [ { "id": "6.1.1.9", "url": "https://www.rhea-db.org/rhea/?query=ec:6.1.1.9", "type": "external" } ], "go_molecular_function": "GO:0002161 aminoacyl-tRNA deacylase activity;GO:0004832 valine-tRNA ligase activity;GO:0005524 ATP binding", "go_cellular_component": "GO:0005576 extracellular region;GO:0005739 mitochondrion;GO:0005829 cytosol;GO:0009507 chloroplast", "go_biological_process": "GO:0006438 valyl-tRNA aminoacylation;GO:0009793 embryo development ending in seed dormancy", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "P93736-1", "record_type": "protein", "filter_code": "0000000.0000101.010000.100000000000000000.0000000001001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "P93748-1", "uniprot_id": [ { "id": "SINA1_ARATH", "url": "https://www.uniprot.org/uniprot/P93748", "type": "external" } ], "mass": 34557.0, "length": 305, "protein_name": "Putative E3 ubiquitin-protein ligase SINAT1", "gene_name": "SINAT1", "organism": "Arabidopsis", "refseq_name": "Protein with RING/U-box and TRAF-like domain", "refseq_ac": [ { "id": "NP_181729", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_181729", "type": "external" } ], "gene_names_uniprotkb": "SINAT1; T6D20.13", "gene_names_refseq": "T6D20.13; T6D20_13", "protein_names_uniprotkb": "Putative E3 ubiquitin-protein ligase SINAT1; 2.3.2.27; RING-type E3 ubiquitin transferase SINAT1; Seven in absentia homolog 1", "protein_names_refseq": "Protein with RING/U-box and TRAF-like domain", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G41980)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "10617197;22122664;23111157;24350984;27862469;28351989;32753431;32786047", "class_list": "", "function": "E3 ubiquitin-protein ligase that mediates ubiquitination and subsequent proteasomal degradation of target proteins (PubMed:28351989, PubMed:32786047). E3 ubiquitin ligases accept ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and then directly transfers the ubiquitin to targeted substrates (PubMed:28351989, PubMed:32786047). It probably triggers the ubiquitin-mediated degradation of different substrates (PubMed:28351989, PubMed:32786047). Mediates the proteasomal-dependent degradation of ATG6, a component of the autophagosome complex (PubMed:28351989). Requires TRAF1A/MUSE14 and TRAF1B/MUSE13 to target ATG6 for ubiquitination and subsequent regulation of autophagosome assembly (PubMed:28351989). Modulates directly the ubiquitination and proteasomal-dependent degradation of FREE1, a component of the ESCRT-I complex (PubMed:32753431, PubMed:32786047). Modulates directly the ubiquitination and proteasomal-dependent degradation of ELC/VPS23A, a component of the ESCRT-I complex (PubMed:32753431)., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 3, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0008270 zinc ion binding;GO:0061630 ubiquitin protein ligase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005776 autophagosome;GO:0005771 multivesicular body", "go_biological_process": "GO:0016567 protein ubiquitination;GO:0006511 ubiquitin-dependent protein catabolic process;GO:2000785 regulation of autophagosome assembly", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "P93748-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "P93751-1", "uniprot_id": [ { "id": "ZFP8_ARATH", "url": "https://www.uniprot.org/uniprot/P93751", "type": "external" } ], "mass": 29571.0, "length": 257, "protein_name": "Zinc finger protein 8", "gene_name": "ZFP8", "organism": "Arabidopsis", "refseq_name": "zinc finger protein 8", "refseq_ac": [ { "id": "NP_181725", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_181725", "type": "external" } ], "gene_names_uniprotkb": "ZFP8; T6D20.16", "gene_names_refseq": "T6D20.16; T6D20_16; ZFP8; ZINC FINGER PROTEIN8; zinc finger protein 8", "protein_names_uniprotkb": "Zinc finger protein 8", "protein_names_refseq": "zinc finger protein 8", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G41940)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "10617197;14593172;17507408;24808098;27862469;7599312", "class_list": "", "function": "Probable transcription factor required for the initiation of inflorescence trichomes in response to gibberellin and cytokinin. Is not involved in the regulation of trichome branching. Is functionally equivalent to GIS2 (PubMed:17507408). Acts as a negative regulator of abscisic acid (ABA) signaling during germination and early seedling development (PubMed:24808098)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q39267", "ec_number_list": [], "go_molecular_function": "GO:0003700 DNA-binding transcription factor activity;GO:0008270 zinc ion binding;GO:0000976 transcription cis-regulatory region binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006355 regulation of DNA-templated transcription;GO:0009740 gibberellic acid mediated signaling pathway;GO:0009736 cytokinin-activated signaling pathway;GO:0009738 abscisic acid-activated signaling pathway", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "P93751-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "P93758-1", "uniprot_id": [ { "id": "RMR42_ARATH", "url": "https://www.uniprot.org/uniprot/P93758", "type": "external" } ], "mass": 30944.0, "length": 274, "protein_name": "Remorin 4.2", "gene_name": "REM4.2", "organism": "Arabidopsis", "refseq_name": "Remorin family protein", "refseq_ac": [ { "id": "NP_181718", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_181718", "type": "external" } ], "gene_names_uniprotkb": "REM4.2; T11A7.23; T6D20.22", "gene_names_refseq": "AtREM4.2; REM4.2; remorin group 4 2", "protein_names_uniprotkb": "Remorin 4.2; AtREM4.2; Remorin group 4 member 2", "protein_names_refseq": "Remorin family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G41870)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "10617197;14593172;17984200;23572148;25289013;25561503;27862469;28011693;29654922", "class_list": "", "function": "Collaborates with REM4.1 to positively regulate the BCTV and BSCTV susceptibility., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 6, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q8H138", "ec_number_list": [], "go_molecular_function": "GO:0019900 kinase binding", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005886 plasma membrane", "go_biological_process": "GO:0009651 response to salt stress;GO:0009414 response to water deprivation;GO:0009737 response to abscisic acid;GO:0010555 response to mannitol", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "P93758-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "P93819-1", "uniprot_id": [ { "id": "MDHC1_ARATH", "url": "https://www.uniprot.org/uniprot/P93819", "type": "external" } ], "mass": 35571.0, "length": 332, "protein_name": "Malate dehydrogenase 1, cytoplasmic", "gene_name": "MDH1", "organism": "Arabidopsis", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "MDH1; F19P19.13", "gene_names_refseq": "", "protein_names_uniprotkb": "Malate dehydrogenase 1, cytoplasmic; 1.1.1.37; Cytosolic MDH1; Cytosolic NAD-dependent malate dehydrogenase 1; Cytosolic malate dehydrogenase 1; cNAD-MDH1", "protein_names_refseq": "", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G04410)", "pathway_count": 1, "publication_count": 20, "publication_id_list": "11130712;14593172;18463617;19292762;19376835;20466843;20876337;22104211;22438062;23111157;23328941;23820729;24601666;25561503;26091701;27862469;28011693;29167316;29194485;30833711", "class_list": "", "function": "Catalyzes a reversible NAD-dependent dehydrogenase reaction involved in central metabolism and redox homeostasis between organellar compartments., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 8, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [ { "id": "1.1.1.37", "url": "https://www.rhea-db.org/rhea/?query=ec:1.1.1.37", "type": "external" }, { "id": "1.1.1.82", "url": "https://www.rhea-db.org/rhea/?query=ec:1.1.1.82", "type": "external" } ], "go_molecular_function": "GO:0003729 mRNA binding;GO:0030060 L-malate dehydrogenase (NAD+) activity", "go_cellular_component": "GO:0005576 extracellular region;GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005829 cytosol;GO:0005886 plasma membrane", "go_biological_process": "GO:0006099 tricarboxylic acid cycle;GO:0010043 response to zinc ion;GO:0006107 oxaloacetate metabolic process;GO:0019674 NAD+ metabolic process;GO:0006108 malate metabolic process", "synthesized_glycan_count": 0, "hit_score": 2.1, "record_id": "P93819-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "P93825-1", "uniprot_id": [ { "id": "ERS2_ARATH", "url": "https://www.uniprot.org/uniprot/P93825", "type": "external" } ], "mass": 72192.0, "length": 645, "protein_name": "Ethylene response sensor 2", "gene_name": "ERS2", "organism": "Arabidopsis", "refseq_name": "ethylene response sensor 2", "refseq_ac": [ { "id": "NP_001323287", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001323287", "type": "external" } ], "gene_names_uniprotkb": "ERS2; F19P19.25", "gene_names_refseq": "ERS2 PROTEIN; ERS2; F19P19.25; F19P19_25; ethylene response sensor 2", "protein_names_uniprotkb": "Ethylene response sensor 2; 2.7.11.-; AtERS2; Protein ERS2", "protein_names_refseq": "ethylene response sensor 2", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G04310)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "11130712;15358768;18273534;27862469;9707532", "class_list": "", "function": "Ethylene receptor related to bacterial two-component regulators. Acts as a redundant negative regulator of ethylene signaling., [UniProtKB]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 2, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "B0FVU3;B0FVU5;B0FVW8;B0FVX0;B0FVX9", "ec_number_list": [], "go_molecular_function": "GO:0004674 protein serine/threonine kinase activity;GO:0005524 ATP binding;GO:0042802 identical protein binding;GO:0046872 metal ion binding;GO:0000155 phosphorelay sensor kinase activity", "go_cellular_component": "GO:0005576 extracellular region;GO:0005783 endoplasmic reticulum;GO:0005789 endoplasmic reticulum membrane", "go_biological_process": "GO:0010105 negative regulation of ethylene-activated signaling pathway", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "P93825-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "P93832-1", "uniprot_id": [ { "id": "LEU32_ARATH", "url": "https://www.uniprot.org/uniprot/P93832", "type": "external" } ], "mass": 43371.0, "length": 405, "protein_name": "3-isopropylmalate dehydrogenase 2, chloroplastic", "gene_name": "IMDH2", "organism": "Arabidopsis", "refseq_name": "isopropylmalate dehydrogenase 2", "refseq_ac": [ { "id": "NP_178171", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_178171", "type": "external" } ], "gene_names_uniprotkb": "IMDH2; IMD2; IMDH; IPMDH2; T21F11.11", "gene_names_refseq": "ARABIDOPSIS ISOPROPYLMALATE DEHYDROGENASE 2; ATIMD2; IMD2; T21F11.11; T21F11_11; isopropylmalate dehydrogenase 2", "protein_names_uniprotkb": "3-isopropylmalate dehydrogenase 2, chloroplastic; 1.1.1.85; 3-IPM-DH 2; AtIMD2; AtIMDH2; AtIMDH3; Beta-IPM dehydrogenase 2; IMDH 2; Isopropylmalate dehydrogenase 2", "protein_names_refseq": "isopropylmalate dehydrogenase 2", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G80560)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "11130712;14593172;15849421;19493961;19674406;20840499;21697089;22440515;27137927;27862469", "class_list": "", "function": "Involved in leucine biosynthesis; catalyzes the oxidative decarboxylation step in leucine biosynthesis (primary metabolism) (PubMed:21697089). Catalyzes the oxidation of 3-carboxy-2-hydroxy-4-methylpentanoate (3-isopropylmalate, 3-IPM) to 3-carboxy-4-methyl-2-oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate (PubMed:15849421, PubMed:20840499). Required during pollen development and involved in embryo sac development (PubMed:20840499)., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 19, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q540Z4;Q8W4P6", "ec_number_list": [ { "id": "1.1.1.85", "url": "https://www.rhea-db.org/rhea/?query=ec:1.1.1.85", "type": "external" } ], "go_molecular_function": "GO:0000287 magnesium ion binding;GO:0042803 protein homodimerization activity;GO:0070403 NAD+ binding;GO:0003862 3-isopropylmalate dehydrogenase activity", "go_cellular_component": "GO:0005829 cytosol;GO:0009507 chloroplast;GO:0009536 plastid;GO:0009570 chloroplast stroma;GO:0009941 chloroplast envelope", "go_biological_process": "GO:0009098 L-leucine biosynthetic process;GO:0009553 embryo sac development;GO:0009555 pollen development", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "P93832-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "P94063-1", "uniprot_id": [ { "id": "HAL3B_ARATH", "url": "https://www.uniprot.org/uniprot/P94063", "type": "external" } ], "mass": 22415.0, "length": 201, "protein_name": "Probable phosphopantothenoylcysteine decarboxylase", "gene_name": "HAL3B", "organism": "Arabidopsis", "refseq_name": "Flavoprotein", "refseq_ac": [ { "id": "NP_973994", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_973994", "type": "external" } ], "gene_names_uniprotkb": "HAL3B; COAC2; T1N15.24; T1N15.28; T1N15_21; T1N15_24", "gene_names_refseq": "ATHAL3B; HAL3B; HAL3; HALOTOLERANCE DETERMINANT 3B; HALOTOLERANCE DETERMINANT 3", "protein_names_uniprotkb": "Probable phosphopantothenoylcysteine decarboxylase; 4.1.1.36; AtCoaC2; AtHal3b; Halotolerance protein Hal3b", "protein_names_refseq": "Flavoprotein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G48605)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "10652125;11130712;16415216;19376835;27862469", "class_list": "", "function": "Involved in plant growth and salt and osmotic tolerance. Catalyzes the decarboxylation of 4'-phosphopantothenoylcysteine to 4'-phosphopantetheine, a key step in coenzyme A biosynthesis. The enzyme is also able to decarboxylate pantothenoylcysteine to pantothenoylcysteamine., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9LP62", "ec_number_list": [ { "id": "4.1.1.36", "url": "https://www.rhea-db.org/rhea/?query=ec:4.1.1.36", "type": "external" } ], "go_molecular_function": "GO:0010181 FMN binding;GO:0004633 phosphopantothenoylcysteine decarboxylase activity;GO:0003677 DNA binding", "go_cellular_component": "GO:0005737 cytoplasm;GO:0071513 phosphopantothenoylcysteine decarboxylase complex", "go_biological_process": "GO:0042538 hyperosmotic salinity response;GO:0015937 coenzyme A biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "P94063-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q01474-1", "uniprot_id": [ { "id": "SAR1B_ARATH", "url": "https://www.uniprot.org/uniprot/Q01474", "type": "external" } ], "mass": 21986.0, "length": 193, "protein_name": "Small COPII coat GTPase SAR1B", "gene_name": "SAR1B", "organism": "Arabidopsis", "refseq_name": "secretion-associated RAS 1B", "refseq_ac": [ { "id": "NP_176029", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_176029", "type": "external" } ], "gene_names_uniprotkb": "SAR1B; F14G9.6; SAR1", "gene_names_refseq": "ARABIDOPSIS THALIANA SECRETION-ASSOCIATED RAS 1B; ATSAR1B; ATSAR1; ATSARA1B; F14G9.6; F14G9_6; SAR1B; SAR1; SARL; SECRETION-ASSOCIATED RAS 1; secretion-associated RAS 1B", "protein_names_uniprotkb": "Small COPII coat GTPase SAR1B; 3.6.5.2; GTP-binding protein SAR1B", "protein_names_refseq": "secretion-associated RAS 1B", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G56330)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "11130712;1396601;14593172;20466843;22335396;25561503;27862469;30833711", "class_list": "", "function": "Small GTPase that cycles between an active GTP-bound and an inactive GDP-bound state and mainly functions in vesicle-mediated endoplasmic reticulum (ER) to Golgi transport. The active GTP-bound form inserts into the endoplasmic reticulum membrane where it recruits the remainder of the coat protein complex II/COPII. The coat protein complex II assembling and polymerizing on endoplasmic reticulum membrane is responsible for both the sorting of cargos and the deformation and budding of membranes into vesicles destined to the Golgi., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [ { "id": "3.6.5.2", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.5.2", "type": "external" }, { "id": "3.6.5.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.5.-", "type": "external" }, { "id": "3.6.5.3", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.5.3", "type": "external" }, { "id": "3.6.5.4", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.5.4", "type": "external" }, { "id": "3.6.5.5", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.5.5", "type": "external" }, { "id": "3.6.5.n1", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.5.n1", "type": "external" } ], "go_molecular_function": "GO:0003924 GTPase activity;GO:0005525 GTP binding;GO:0046872 metal ion binding;GO:0003925 G protein activity", "go_cellular_component": "GO:0005783 endoplasmic reticulum;GO:0005829 cytosol;GO:0005886 plasma membrane;GO:0005789 endoplasmic reticulum membrane;GO:0032580 Golgi cisterna membrane", "go_biological_process": "GO:0006886 intracellular protein transport;GO:0061024 membrane organization;GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport;GO:0016050 vesicle organization;GO:0003400 regulation of COPII vesicle coating", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "Q01474-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q01593-1", "uniprot_id": [ { "id": "ABI3_ARATH", "url": "https://www.uniprot.org/uniprot/Q01593", "type": "external" } ], "mass": 79500.0, "length": 720, "protein_name": "B3 domain-containing transcription factor ABI3", "gene_name": "ABI3", "organism": "Arabidopsis", "refseq_name": "AP2/B3-like transcriptional factor family protein", "refseq_ac": [ { "id": "NP_189108", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_189108", "type": "external" } ], "gene_names_uniprotkb": "ABI3; MSD24.2", "gene_names_refseq": "ABA INSENSITIVE 3; ABI3; ABSCISIC ACID INSENSITIVE 3; AtABI3; SIS10; SUGAR INSENSITIVE 10", "protein_names_uniprotkb": "B3 domain-containing transcription factor ABI3; Protein ABSCISIC ACID-INSENSITIVE 3", "protein_names_refseq": "AP2/B3-like transcriptional factor family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G24650)", "pathway_count": 1, "publication_count": 16, "publication_id_list": "10743655;10907853;11489176;12657652;1359917;15998807;16816409;17267444;17435248;18986826;19531597;19783648;20525852;24043799;26091701;27862469", "class_list": "", "function": "Participates in abscisic acid-regulated gene expression during seed development. Regulates the transcription of SGR1 and SGR2 that are involved in leaf and embryo degreening., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A6N2M3;A6N2N0;A6N2P3;O23625;Q1EQV9;Q56ZT2;Q570G9", "ec_number_list": [], "go_molecular_function": "GO:0003677 DNA binding;GO:0003700 DNA-binding transcription factor activity;GO:0043565 sequence-specific DNA binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005829 cytosol", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006355 regulation of DNA-templated transcription;GO:0045893 positive regulation of DNA-templated transcription;GO:0031930 mitochondria-nucleus signaling pathway;GO:0009657 plastid organization", "synthesized_glycan_count": 0, "hit_score": 1.7, "record_id": "Q01593-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000001001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q01908-1", "uniprot_id": [ { "id": "ATPG1_ARATH", "url": "https://www.uniprot.org/uniprot/Q01908", "type": "external" } ], "mass": 40911.0, "length": 373, "protein_name": "ATP synthase gamma chain 1, chloroplastic", "gene_name": "ATPC1", "organism": "Arabidopsis", "refseq_name": "ATPase, F1 complex, gamma subunit protein", "refseq_ac": [ { "id": "NP_567265", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_567265", "type": "external" } ], "gene_names_uniprotkb": "ATPC1; T19J18.4", "gene_names_refseq": "ATPC1; T19J18.4; T19J18_4", "protein_names_uniprotkb": "ATP synthase gamma chain 1, chloroplastic; F-ATPase gamma subunit 1", "protein_names_refseq": "ATPase, F1 complex, gamma subunit protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G04640)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "10617198;14593172;1826905;19376835;21768351;23111157;25561503;25775508;27862469", "class_list": "", "function": "Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 3, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0030234 enzyme regulator activity;GO:0046933 proton-transporting ATP synthase activity, rotational mechanism", "go_cellular_component": "GO:0005829 cytosol;GO:0045259 proton-transporting ATP synthase complex;GO:0009535 chloroplast thylakoid membrane;GO:0009507 chloroplast;GO:0009534 chloroplast thylakoid", "go_biological_process": "GO:0006754 ATP biosynthetic process;GO:0015986 proton motive force-driven ATP synthesis;GO:0009772 photosynthetic electron transport in photosystem II", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "Q01908-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q02283-1", "uniprot_id": [ { "id": "HAT5_ARATH", "url": "https://www.uniprot.org/uniprot/Q02283", "type": "external" } ], "mass": 30933.0, "length": 272, "protein_name": "Homeobox-leucine zipper protein HAT5", "gene_name": "HAT5", "organism": "Arabidopsis", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "HAT5; ATHB-1; F4P13.2", "gene_names_refseq": "", "protein_names_uniprotkb": "Homeobox-leucine zipper protein HAT5; HD-ZIP protein 5; HD-ZIP protein ATHB-1; Homeodomain transcription factor ATHB-1; Homeodomain-leucine zipper protein HAT5", "protein_names_refseq": "", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G01470)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "11130713;1349174;14593172;16055682;1675603;24531799;27862469;8253077;8535134;9405140", "class_list": "", "function": "Probable transcription activator involved in leaf development. Binds to the DNA sequence 5'-CAAT[AT]ATTG-3'., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0003700 DNA-binding transcription factor activity;GO:0042803 protein homodimerization activity;GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific;GO:0043565 sequence-specific DNA binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0045893 positive regulation of DNA-templated transcription;GO:0017148 negative regulation of translation;GO:0009651 response to salt stress;GO:0009637 response to blue light", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "Q02283-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q02971-1", "uniprot_id": [ { "id": "CADH7_ARATH", "url": "https://www.uniprot.org/uniprot/Q02971", "type": "external" } ], "mass": 38246.0, "length": 357, "protein_name": "Cinnamyl alcohol dehydrogenase 7", "gene_name": "CAD7", "organism": "Arabidopsis", "refseq_name": "cinnamyl alcohol dehydrogenase 7", "refseq_ac": [ { "id": "NP_001031805", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001031805", "type": "external" } ], "gene_names_uniprotkb": "CAD7; CAD4; CADB1; ELI3-1; F20D10.100; LCAD-B", "gene_names_refseq": "ATCAD7; CAD7; CINNAMYL-ALCOHOL DEHYDROGENASE 7; ELI3-1; ELI3; ELICITOR-ACTIVATED GENE 3; F20D10.100; F20D10_100; elicitor-activated gene 3-1", "protein_names_uniprotkb": "Cinnamyl alcohol dehydrogenase 7; 1.1.1.195; AtCAD7; Cinnamyl alcohol dehydrogenase-like protein B", "protein_names_refseq": "cinnamyl alcohol dehydrogenase 7", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G37980)", "pathway_count": 1, "publication_count": 13, "publication_id_list": "10617198;10809443;14593172;1464303;14745009;16832689;17467016;19423640;22060019;23572148;25561503;26091701;27862469", "class_list": "", "function": "Involved in lignin biosynthesis. Catalyzes the final step specific for the production of lignin monomers. Catalyzes the NADPH-dependent reduction of coniferaldehyde, 5-hydroxyconiferaldehyde, sinapaldehyde, 4-coumaraldehyde and caffeyl aldehyde to their respective alcohols., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "B9DG76;O65622;Q53ZN3;Q9SZJ9", "ec_number_list": [ { "id": "1.1.1.195", "url": "https://www.rhea-db.org/rhea/?query=ec:1.1.1.195", "type": "external" } ], "go_molecular_function": "GO:0008270 zinc ion binding;GO:0045551 cinnamyl-alcohol dehydrogenase activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005886 plasma membrane", "go_biological_process": "GO:0009617 response to bacterium;GO:0009809 lignin biosynthetic process;GO:0010597 green leaf volatile biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 1.4, "record_id": "Q02971-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q02972-1", "uniprot_id": [ { "id": "CADH8_ARATH", "url": "https://www.uniprot.org/uniprot/Q02972", "type": "external" } ], "mass": 38942.0, "length": 359, "protein_name": "Cinnamyl alcohol dehydrogenase 8", "gene_name": "CAD8", "organism": "Arabidopsis", "refseq_name": "cinnamyl alcohol dehydrogenase 8", "refseq_ac": [ { "id": "NP_195512", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_195512", "type": "external" } ], "gene_names_uniprotkb": "CAD8; BAD; CAD5; CADB2; ELI3-2; F20D10.110", "gene_names_refseq": "ARABIDOPSIS THALIANA CINNAMYL-ALCOHOL DEHYDROGENASE 8; ATCAD8; CAD-B2; CI0009; CINNAMYL-ALCOHOL DEHYDROGENASE B2; CINNAMYL-ALCOHOL DEHYDROGENASE; ELI3-2; ELI3; ELICITOR-ACTIVATED GENE 3; F20D10.110; F20D10_110; elicitor-activated gene 3-2", "protein_names_uniprotkb": "Cinnamyl alcohol dehydrogenase 8; 1.1.1.195; AtCAD8; NAD-dependent mannitol dehydrogenase 2", "protein_names_refseq": "cinnamyl alcohol dehydrogenase 8", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G37990)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "10617198;14593172;1464303;14745009;16832689;17467016;27862469", "class_list": "", "function": "Involved in lignin biosynthesis. Catalyzes the final step specific for the production of lignin monomers. Catalyzes the NADPH-dependent reduction of coniferaldehyde, 5-hydroxyconiferaldehyde, sinapaldehyde, 4-coumaraldehyde and caffeyl aldehyde to their respective alcohols., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q53ZN2", "ec_number_list": [ { "id": "1.1.1.195", "url": "https://www.rhea-db.org/rhea/?query=ec:1.1.1.195", "type": "external" } ], "go_molecular_function": "GO:0008270 zinc ion binding;GO:0047681 aryl-alcohol dehydrogenase (NADP+) activity;GO:0045551 cinnamyl-alcohol dehydrogenase activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005886 plasma membrane", "go_biological_process": "GO:0009617 response to bacterium;GO:0009809 lignin biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q02972-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q03509-1", "uniprot_id": [ { "id": "CALM6_ARATH", "url": "https://www.uniprot.org/uniprot/Q03509", "type": "external" } ], "mass": 16834.0, "length": 149, "protein_name": "Calmodulin-6", "gene_name": "CAM6", "organism": "Arabidopsis", "refseq_name": "calmodulin 6", "refseq_ac": [ { "id": "NP_850860", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_850860", "type": "external" } ], "gene_names_uniprotkb": "CAM6; F13M11", "gene_names_refseq": "ACAM-6; CAM6; calmodulin 6", "protein_names_uniprotkb": "Calmodulin-6; CaM-6", "protein_names_refseq": "calmodulin 6", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G21274)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "10531384;11130714;14593172;23111157;27862469;30833711;8507825", "class_list": "", "function": "Calmodulin mediates the control of a large number of enzymes, ion channels and other proteins by Ca(2+). Among the enzymes to be stimulated by the calmodulin-Ca(2+) complex are a number of protein kinases and phosphatases., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 5, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0005509 calcium ion binding;GO:0030234 enzyme regulator activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005829 cytosol;GO:0009536 plastid", "go_biological_process": "GO:0019722 calcium-mediated signaling", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q03509-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q04836-1", "uniprot_id": [ { "id": "CP31A_ARATH", "url": "https://www.uniprot.org/uniprot/Q04836", "type": "external" } ], "mass": 35787.0, "length": 329, "protein_name": "31 kDa ribonucleoprotein, chloroplastic", "gene_name": "CP31A", "organism": "Arabidopsis", "refseq_name": "31-kDa RNA binding protein", "refseq_ac": [ { "id": "NP_001328008", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001328008", "type": "external" } ], "gene_names_uniprotkb": "CP31A; F22K18.30; RBP31; RNPT", "gene_names_refseq": "31-kDa RNA binding protein; APPROXIMATELY 31 KD; ARABIDOPSIS THALIANA RNA BINDING PROTEIN; ATRBP31; ATRBP33; CP31; F6I7.11; RBP31; STEP1", "protein_names_uniprotkb": "31 kDa ribonucleoprotein, chloroplastic; AtRBP33; RNA-binding protein 1/2/3; RNA-binding protein CP31A; RNA-binding protein RNP-T; RNA-binding protein cp31", "protein_names_refseq": "31-kDa RNA binding protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G24770)", "pathway_count": 1, "publication_count": 15, "publication_id_list": "10617198;12231822;14593172;1463823;14703514;17450127;19297624;19376835;22060019;23110894;23820729;27862469;29654922;7894017;7972518", "class_list": "", "function": "Required for specific RNA editing events in chloroplasts and stabilizes specific chloroplast mRNAs. Associates with the 3'-terminus ndhF mRNAs and protects them against 3'-exonucleolytic degradation (PubMed:19297624, PubMed:23110894). Required for normal chloroplast development under cold stress conditions by stabilizing transcripts of numerous mRNAs under these conditions (PubMed:23110894). May modulate telomere replication through RNA binding domains (PubMed:14703514)., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 7, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "P92871;Q03394;Q43350;Q94EH5", "ec_number_list": [], "go_molecular_function": "GO:0003723 RNA binding;GO:0003729 mRNA binding;GO:0008266 poly(U) RNA binding", "go_cellular_component": "GO:0005829 cytosol;GO:1990904 ribonucleoprotein complex;GO:0009535 chloroplast thylakoid membrane;GO:0009507 chloroplast;GO:0009570 chloroplast stroma", "go_biological_process": "GO:0006396 RNA processing;GO:0006397 mRNA processing;GO:0009409 response to cold;GO:0045087 innate immune response;GO:0009631 cold acclimation", "synthesized_glycan_count": 0, "hit_score": 1.6, "record_id": "Q04836-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q05153-1", "uniprot_id": [ { "id": "SSRP1_ARATH", "url": "https://www.uniprot.org/uniprot/Q05153", "type": "external" } ], "mass": 71646.0, "length": 646, "protein_name": "FACT complex subunit SSRP1", "gene_name": "SSRP1", "organism": "Arabidopsis", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "SSRP1; HMGB8; NFD8; T19N8.2", "gene_names_refseq": "", "protein_names_uniprotkb": "FACT complex subunit SSRP1; Facilitates chromatin transcription complex subunit SSRP1; High mobility group B protein 8; Nucleosome/chromatin assembly factor group D 08; Nucleosome/chromatin assembly factor group D 8; Protein NUCLEAR FUSION DEFECTIVE 8; Recombination signal sequence recognition protein 1", "protein_names_refseq": "", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G28730)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "10907853;14593172;1480495;15546350;16698901;19423640;23776212;25561503;27862469", "class_list": "", "function": "Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment of the nucleosome following the passage of RNA polymerase II. Binds specifically to double-stranded DNA (Probable). Required for karyogamy during female gametophyte development, when the two polar nuclei fuse to form the diploid central cell nucleus (PubMed:16698901)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 4, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "C0Z265;Q56X23;Q9LHA2", "ec_number_list": [], "go_molecular_function": "GO:0003677 DNA binding;GO:0003700 DNA-binding transcription factor activity;GO:0042393 histone binding;GO:0031491 nucleosome binding", "go_cellular_component": "GO:0005634 nucleus;GO:0000791 euchromatin;GO:0035101 FACT complex", "go_biological_process": "GO:0006281 DNA repair;GO:0006351 DNA-templated transcription;GO:0006260 DNA replication;GO:0000741 karyogamy;GO:0010197 polar nucleus fusion", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "Q05153-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q05466-1", "uniprot_id": [ { "id": "HAT4_ARATH", "url": "https://www.uniprot.org/uniprot/Q05466", "type": "external" } ], "mass": 31853.0, "length": 284, "protein_name": "Homeobox-leucine zipper protein HAT4", "gene_name": "HAT4", "organism": "Arabidopsis", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "HAT4; ATHB-2; FCAALL.101; dl4415w", "gene_names_refseq": "", "protein_names_uniprotkb": "Homeobox-leucine zipper protein HAT4; HD-ZIP protein 4; HD-ZIP protein ATHB-2; Homeodomain transcription factor ATHB-2; Homeodomain-leucine zipper protein HAT4", "protein_names_refseq": "", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G16780)", "pathway_count": 1, "publication_count": 15, "publication_id_list": "10477292;10617198;11260495;12694288;1349174;14593172;16055682;17614917;25561503;27862469;8106086;8253077;8449400;9405140;9461215", "class_list": "", "function": "Probable transcription factor involved in the negative regulation of cell elongation and specific cell proliferation processes such as lateral root formation and secondary growth of the vascular system. Acts as a mediator of the red/far-red light effects on leaf cell expansion in the shading response. Binds to the DNA sequence 5'-CAAT[GC]ATTG-3'. Negatively regulates its own expression., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 3, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A5Y7H1;A5Y7H2;A5Y7H3;A5Y7H4;A5Y7H5;A5Y7H6;A5Y7H7;A5Y7H8;A5Y7H9;A5Y7I0;A5Y7I1;A5Y7I2;A5Y7I3;A5Y7I4;A5Y7I5", "ec_number_list": [], "go_molecular_function": "GO:0003700 DNA-binding transcription factor activity;GO:0042803 protein homodimerization activity;GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific;GO:0043565 sequence-specific DNA binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0045892 negative regulation of DNA-templated transcription;GO:0009826 unidimensional cell growth;GO:0009585 red, far-red light phototransduction;GO:0009641 shade avoidance", "synthesized_glycan_count": 0, "hit_score": 1.6, "record_id": "Q05466-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000001001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q05609-1", "uniprot_id": [ { "id": "CTR1_ARATH", "url": "https://www.uniprot.org/uniprot/Q05609", "type": "external" } ], "mass": 90306.0, "length": 821, "protein_name": "Serine/threonine-protein kinase CTR1", "gene_name": "CTR1", "organism": "Arabidopsis", "refseq_name": "Protein kinase superfamily protein", "refseq_ac": [ { "id": "NP_195993", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_195993", "type": "external" } ], "gene_names_uniprotkb": "CTR1; F17C15_150", "gene_names_refseq": "AtCTR1; CONSTITUTIVE TRIPLE RESPONSE 1; CTR1; F17C15.150; F17C15_150; SERINE/THREONINE-PROTEIN KINASE CTR1; SIS1; SUGAR-INSENSITIVE 1", "protein_names_uniprotkb": "Serine/threonine-protein kinase CTR1; 2.7.11.1; Protein CONSTITUTIVE TRIPLE RESPONSE1", "protein_names_refseq": "Protein kinase superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G03730)", "pathway_count": 1, "publication_count": 12, "publication_id_list": "11130714;20466843;23111157;23132950;23328941;25561503;25822663;27862469;28011693;29654922;30833711;8431946", "class_list": "", "function": "Acts as a negative regulator in the ethylene response pathway (PubMed:8431946). Phosphorylates the cytosolic C-terminal domain of EIN2, preventing the signaling in the absence of ethylene (PubMed:23132950). Interacts with C24:1-ceramide upon hypoxic conditions (e.g. submergences) to in turn regulate EIN2 endoplasmic reticulum (ER)-to-nucleus translocation and EIN3 stabilization (PubMed:25822663)., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 8, "reported_mutagensis": 2, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [ { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.3.2.27", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.2.27", "type": "external" }, { "id": "2.7.10.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.-", "type": "external" }, { "id": "3.1.4.46", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.4.46", "type": "external" }, { "id": "2.7.11.25", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.25", "type": "external" }, { "id": "2.7.11.22", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.22", "type": "external" }, { "id": "2.7.10.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.1", "type": "external" }, { "id": "2.7.11.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.-", "type": "external" }, { "id": "2.7.11.24", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.24", "type": "external" }, { "id": "2.7.12.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.1", "type": "external" }, { "id": "2.7.11.23", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.23", "type": "external" }, { "id": "2.7.12.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.2", "type": "external" }, { "id": "2.7.-.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.-.-", "type": "external" }, { "id": "3.1.26.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.26.-", "type": "external" }, { "id": "3.1.3.16", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.16", "type": "external" }, { "id": "2.7.11.34", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.34", "type": "external" }, { "id": "4.6.1.2", "url": "https://www.rhea-db.org/rhea/?query=ec:4.6.1.2", "type": "external" } ], "go_molecular_function": "GO:0004674 protein serine/threonine kinase activity;GO:0005524 ATP binding;GO:0004712 protein serine/threonine/tyrosine kinase activity;GO:0106310 protein serine kinase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005789 endoplasmic reticulum membrane", "go_biological_process": "GO:0007165 signal transduction;GO:0001666 response to hypoxia;GO:0046777 protein autophosphorylation;GO:0009744 response to sucrose;GO:0009750 response to fructose", "synthesized_glycan_count": 0, "hit_score": 1.3, "record_id": "Q05609-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q05753-1", "uniprot_id": [ { "id": "AKRP_ARATH", "url": "https://www.uniprot.org/uniprot/Q05753", "type": "external" } ], "mass": 48878.0, "length": 435, "protein_name": "Ankyrin repeat domain-containing protein, chloroplastic", "gene_name": "AKRP", "organism": "Arabidopsis", "refseq_name": "ankyrin repeat protein", "refseq_ac": [ { "id": "NP_569027", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_569027", "type": "external" } ], "gene_names_uniprotkb": "AKRP; AKR; EMB2036; K2A18.13", "gene_names_refseq": "AKRP; EMB16; EMB2036; EMBRYO DEFECTIVE 16; EMBRYO DEFECTIVE 2036; ankyrin repeat protein", "protein_names_uniprotkb": "Ankyrin repeat domain-containing protein, chloroplastic; AKRP; Protein EMBRYO DEFECTIVE 2036", "protein_names_refseq": "ankyrin repeat protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G66055)", "pathway_count": 1, "publication_count": 12, "publication_id_list": "11910074;12232406;1281700;14593172;17092312;23572148;23660473;23776212;25561503;27862469;30833711;9679202", "class_list": "", "function": "Involved in the initial differentiation of the proplastid during the embryo development and in plastid differentiation linked to cell differentiation, morphogenesis and organogenesis during the plant life cycle., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 3, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q3E852;Q8GYN6;Q940Y0", "ec_number_list": [], "go_molecular_function": "GO:0140693 molecular condensate scaffold activity", "go_cellular_component": "GO:0005634 nucleus;GO:0009507 chloroplast", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 1.3, "record_id": "Q05753-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q05758-1", "uniprot_id": [ { "id": "ILV5_ARATH", "url": "https://www.uniprot.org/uniprot/Q05758", "type": "external" } ], "mass": 63812.0, "length": 591, "protein_name": "Ketol-acid reductoisomerase, chloroplastic", "gene_name": "F14P22.200", "organism": "Arabidopsis", "refseq_name": "ketol-acid reductoisomerase", "refseq_ac": [ { "id": "NP_001078309", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001078309", "type": "external" } ], "gene_names_uniprotkb": "F14P22.200", "gene_names_refseq": "", "protein_names_uniprotkb": "Ketol-acid reductoisomerase, chloroplastic; 1.1.1.86; Acetohydroxy-acid reductoisomerase; Alpha-keto-beta-hydroxylacyl reductoisomerase", "protein_names_refseq": "ketol-acid reductoisomerase", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G58610)", "pathway_count": 1, "publication_count": 11, "publication_id_list": "11130713;14593172;17272265;22074104;22223895;27862469;28011693;29654922;30833711;8379936;8448371", "class_list": "", "function": "", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 5, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q42559", "ec_number_list": [ { "id": "1.1.1.86", "url": "https://www.rhea-db.org/rhea/?query=ec:1.1.1.86", "type": "external" } ], "go_molecular_function": "GO:0000287 magnesium ion binding;GO:0042803 protein homodimerization activity;GO:0005507 copper ion binding;GO:0070402 NADPH binding;GO:0004455 ketol-acid reductoisomerase activity", "go_cellular_component": "GO:0005739 mitochondrion;GO:0005829 cytosol;GO:0009505 plant-type cell wall;GO:0009507 chloroplast;GO:0009536 plastid", "go_biological_process": "GO:0009099 L-valine biosynthetic process;GO:0009097 isoleucine biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 1.2, "record_id": "Q05758-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q058N4-1", "uniprot_id": [ { "id": "MRS2B_ARATH", "url": "https://www.uniprot.org/uniprot/Q058N4", "type": "external" } ], "mass": 51093.0, "length": 459, "protein_name": "Magnesium transporter MRS2-11, chloroplastic", "gene_name": "MRS2-11", "organism": "Arabidopsis", "refseq_name": "magnesium (Mg) transporter 10", "refseq_ac": [ { "id": "NP_001332159", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001332159", "type": "external" } ], "gene_names_uniprotkb": "MRS2-11; GMN10; MGT10; MRN17.6", "gene_names_refseq": "ATMGT10; GMN10; MAGNESIUM TRANSPORTER 10; MGT10; MRN17.6; MRN17_6; MRS2-11; magnesium (Mg) transporter 10", "protein_names_uniprotkb": "Magnesium transporter MRS2-11, chloroplastic; AtMGT10; Magnesium Transporter 10", "protein_names_refseq": "magnesium (Mg) transporter 10", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G22830)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "11752386;18431481;19966073;27862469;9330910", "class_list": "", "function": "High-affinity magnesium transporter that mediates the influx of magnesium in chloroplast., [UniProtKB, PubMed, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9FFC4;Q9FPL0", "ec_number_list": [], "go_molecular_function": "GO:0015095 magnesium ion transmembrane transporter activity", "go_cellular_component": "GO:0009507 chloroplast;GO:0009536 plastid;GO:0009941 chloroplast envelope;GO:0031969 chloroplast membrane", "go_biological_process": "GO:0015693 magnesium ion transport;GO:1903830 magnesium ion transmembrane transport;GO:0010960 magnesium ion homeostasis;GO:0010027 thylakoid membrane organization;GO:0010117 photoprotection", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q058N4-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q05999-1", "uniprot_id": [ { "id": "D6KL3_ARATH", "url": "https://www.uniprot.org/uniprot/Q05999", "type": "external" } ], "mass": 64286.0, "length": 578, "protein_name": "Serine/threonine-protein kinase D6PKL3", "gene_name": "D6PKL3", "organism": "Arabidopsis", "refseq_name": "Protein kinase superfamily protein", "refseq_ac": [ { "id": "NP_001030784", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001030784", "type": "external" } ], "gene_names_uniprotkb": "D6PKL3; MMJ24.14; PK7", "gene_names_refseq": "ATPK7; D6 PROTEIN KINASE LIKE 3; D6PKL3", "protein_names_uniprotkb": "Serine/threonine-protein kinase D6PKL3; 2.7.11.1; D6 protein kinase-like 3; Serine/threonine-protein kinase AtPK7", "protein_names_refseq": "Protein kinase superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G27580)", "pathway_count": 1, "publication_count": 15, "publication_id_list": "10819329;13678909;1446831;14593172;19168677;23111157;23172892;23572148;23709629;23776212;24043427;24601666;27862469;29167316;30833711", "class_list": "", "function": "Protein kinase that regulates the auxin transport activity of PIN auxin efflux facilitators by direct phosphorylation. D6PK-mediated PIN phosphorylation promotes auxin transport in the hypocotyl and this is a prerequisite for PHOT1-dependent hypocotyl bending., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q67YR9", "ec_number_list": [ { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.3.2.27", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.2.27", "type": "external" }, { "id": "2.7.10.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.-", "type": "external" }, { "id": "3.1.4.46", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.4.46", "type": "external" }, { "id": "2.7.11.25", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.25", "type": "external" }, { "id": "2.7.11.22", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.22", "type": "external" }, { "id": "2.7.10.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.1", "type": "external" }, { "id": "2.7.11.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.-", "type": "external" }, { "id": "2.7.11.24", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.24", "type": "external" }, { "id": "2.7.12.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.1", "type": "external" }, { "id": "2.7.11.23", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.23", "type": "external" }, { "id": "2.7.12.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.2", "type": "external" }, { "id": "2.7.-.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.-.-", "type": "external" }, { "id": "3.1.26.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.26.-", "type": "external" }, { "id": "3.1.3.16", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.16", "type": "external" }, { "id": "2.7.11.34", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.34", "type": "external" }, { "id": "4.6.1.2", "url": "https://www.rhea-db.org/rhea/?query=ec:4.6.1.2", "type": "external" } ], "go_molecular_function": "GO:0004672 protein kinase activity;GO:0004674 protein serine/threonine kinase activity;GO:0005524 ATP binding;GO:0016301 kinase activity;GO:0106310 protein serine kinase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005886 plasma membrane;GO:0009507 chloroplast", "go_biological_process": "GO:0006468 protein phosphorylation;GO:0009555 pollen development;GO:0009638 phototropism;GO:0009734 auxin-activated signaling pathway;GO:0062075 pollen aperture formation", "synthesized_glycan_count": 0, "hit_score": 1.6, "record_id": "Q05999-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q06327-1", "uniprot_id": [ { "id": "LOX1_ARATH", "url": "https://www.uniprot.org/uniprot/Q06327", "type": "external" } ], "mass": 98045.0, "length": 859, "protein_name": "Linoleate 9S-lipoxygenase 1", "gene_name": "LOX1", "organism": "Arabidopsis", "refseq_name": "lipoxygenase 1", "refseq_ac": [ { "id": "NP_175900", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_175900", "type": "external" } ], "gene_names_uniprotkb": "LOX1; F14C21.3; F14C21.54; T24C10.13", "gene_names_refseq": "ARABIDOPSIS LIPOXYGENASE 1; ATLOX1; LIPOXYGENASE; LOX1; lipoxygenase 1", "protein_names_uniprotkb": "Linoleate 9S-lipoxygenase 1; 1.13.11.58; AtLOX1; Lipoxygenase 1", "protein_names_refseq": "lipoxygenase 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G55020)", "pathway_count": 1, "publication_count": 16, "publication_id_list": "11130712;11891244;12232208;14593172;17369372;18949503;21481031;22199234;23314084;23526882;26075826;26417008;27862469;28371855;7506426;8305494", "class_list": "", "function": "9S-lipoxygenase that can use linoleic acid or linolenic acid as substrates. Plant lipoxygenases may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding. Catalyzes the hydroperoxidation of lipids containing a cis,cis-1,4-pentadiene structure. Function as regulators of root development by controlling the emergence of lateral roots (PubMed:17369372, PubMed:18949503). 9S-lypoxygenase-derived oxylipins may play an antagonistic role to ethylene signaling in the control of responses involving oxidative stress, lipid peroxidation and plant defense (PubMed:21481031). LOX1-derived oxylipins may be involved in stress signaling from roots to shoots in response to cadmium exposure (PubMed:23314084). 9S-lypoxygenase-derived oxylipins are engaged during infection to control the balance between salicylic acid (SA) and jasmonate (JA) signaling to facilitate infection by the fungal pathogen Fusarium graminearum (PubMed:26075826). 9S-lypoxygenase-derived oxylipins activate brassinosteroid signaling to promote cell wall-based defense and limit pathogen infection (PubMed:26417008). The LOX1-derived compound (9S)-hydroperoxy-(10E,12Z,15Z)-octadecatrienoate protects plant tissues against infection by the bacterial pathogen Pseudomonas syringae pv tomato DC3000 (PubMed:22199234). The LOX1-derived oxylipins are required to trigger stomatal closure in response to both infection by the bacterial pathogen Pseudomonas syringae pv tomato DC3000, and the pathogen-associated molecular pattern (PAMP) flagellin peptide flg22 (PubMed:23526882). Contributes to the oxidation of free fatty acids during seed aging (PubMed:28371855)., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9FZ30", "ec_number_list": [ { "id": "1.13.11.58", "url": "https://www.rhea-db.org/rhea/?query=ec:1.13.11.58", "type": "external" } ], "go_molecular_function": "GO:0046872 metal ion binding;GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen;GO:1990136 linoleate 9S-lipoxygenase activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0009536 plastid", "go_biological_process": "GO:0034440 lipid oxidation;GO:0006952 defense response;GO:0009611 response to wounding;GO:0042742 defense response to bacterium;GO:0031408 oxylipin biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 1.7, "record_id": "Q06327-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q06402-1", "uniprot_id": [ { "id": "1A12_ARATH", "url": "https://www.uniprot.org/uniprot/Q06402", "type": "external" } ], "mass": 55532.0, "length": 496, "protein_name": "1-aminocyclopropane-1-carboxylate synthase 2", "gene_name": "ACS2", "organism": "Arabidopsis", "refseq_name": "1-amino-cyclopropane-1-carboxylate synthase 2", "refseq_ac": [ { "id": "NP_171655", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_171655", "type": "external" } ], "gene_names_uniprotkb": "ACS2; ACC1; F22L4.4", "gene_names_refseq": "1-AMINOCYCLOPROPANE-1-CARBOXYLATE SYNTHASE; 1-amino-cyclopropane-1-carboxylate synthase 2; ACS2; AT-ACC2; EC 4.4.1.14; F22L4.4; F22L4_4; S-ADENOSYL-L-METHIONINE METHYLTHIOADENOSINE-LYASE", "protein_names_uniprotkb": "1-aminocyclopropane-1-carboxylate synthase 2; 4.4.1.14; ACC synthase 2; S-adenosyl-L-methionine methylthioadenosine-lyase 2", "protein_names_refseq": "1-amino-cyclopropane-1-carboxylate synthase 2", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G01480)", "pathway_count": 1, "publication_count": 12, "publication_id_list": "11130712;12968022;1357670;1438312;14593172;15539472;18182027;20659280;25122152;27862469;8566772;9666060", "class_list": "", "function": "1-aminocyclopropane-1-carboxylate synthase (ACS) enzymes catalyze the conversion of S-adenosyl-L-methionine (SAM) into 1-aminocyclopropane-1-carboxylate (ACC), a direct precursor of ethylene., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 3, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q941E7", "ec_number_list": [ { "id": "4.4.1.14", "url": "https://www.rhea-db.org/rhea/?query=ec:4.4.1.14", "type": "external" } ], "go_molecular_function": "GO:0030170 pyridoxal phosphate binding;GO:0008483 transaminase activity;GO:0016847 1-aminocyclopropane-1-carboxylate synthase activity", "go_cellular_component": "GO:0005737 cytoplasm", "go_biological_process": "GO:0009414 response to water deprivation;GO:0006520 amino acid metabolic process;GO:0009693 ethylene biosynthetic process;GO:0009835 fruit ripening", "synthesized_glycan_count": 0, "hit_score": 1.3, "record_id": "Q06402-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q06738-1", "uniprot_id": [ { "id": "RD29A_ARATH", "url": "https://www.uniprot.org/uniprot/Q06738", "type": "external" } ], "mass": 77856.0, "length": 710, "protein_name": "Low-temperature-induced 78 kDa protein", "gene_name": "RD29A", "organism": "Arabidopsis", "refseq_name": "low-temperature-responsive protein 78 (LTI78) / desiccation-responsive protein 29A (RD29A)", "refseq_ac": [ { "id": "NP_200044", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_200044", "type": "external" } ], "gene_names_uniprotkb": "RD29A; COR78; K24M7.4; LTI140; LTI78", "gene_names_refseq": "COLD REGULATED 78; COR78; K24M7.4; K24M7_4; LOW-TEMPERATURE-INDUCED 78; LTI140; LTI78; RD29A; RESPONSIVE TO DESSICATION 29A", "protein_names_uniprotkb": "Low-temperature-induced 78 kDa protein; Desiccation-responsive protein 29A", "protein_names_refseq": "low-temperature-responsive protein 78 (LTI78) / desiccation-responsive protein 29A (RD29A)", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G52310)", "pathway_count": 1, "publication_count": 44, "publication_id_list": "10718197;12694590;14593172;16463099;16766676;16913865;17227550;17453213;1830821;18779215;19253305;19376835;19470100;21374086;21408135;21677096;21768351;21832142;22438062;22505693;22627139;22983672;23111157;23172892;23328941;23451802;23572148;23573000;23660473;23776212;24598995;25561503;26091701;27862469;28011693;29167316;29654922;30833711;8148648;8290624;8310052;8448363;9418048;9880362", "class_list": "", "function": "Involved in responses to abiotic stresses (PubMed:21374086). Regulates probably root elongation in cold conditions (PubMed:19470100)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 29, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q04981;Q39060;Q56Y03;Q93Y41", "ec_number_list": [], "go_molecular_function": "GO:0016788 hydrolase activity, acting on ester bonds", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005829 cytosol;GO:0009536 plastid", "go_biological_process": "GO:0009609 response to symbiotic bacterium;GO:0006970 response to osmotic stress;GO:0009409 response to cold;GO:0009611 response to wounding;GO:0007623 circadian rhythm", "synthesized_glycan_count": 0, "hit_score": 4.5, "record_id": "Q06738-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q06850-1", "uniprot_id": [ { "id": "CDPK1_ARATH", "url": "https://www.uniprot.org/uniprot/Q06850", "type": "external" } ], "mass": 68254.0, "length": 610, "protein_name": "Calcium-dependent protein kinase 1", "gene_name": "CPK1", "organism": "Arabidopsis", "refseq_name": "calcium dependent protein kinase 1", "refseq_ac": [ { "id": "NP_196107", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_196107", "type": "external" } ], "gene_names_uniprotkb": "CPK1; AK1; MUK11.19", "gene_names_refseq": "ATCPK1; CALCIUM DEPENDENT PROTEIN KINASE; CPK1; calcium dependent protein kinase 1", "protein_names_uniprotkb": "Calcium-dependent protein kinase 1; 2.7.11.1; AtCDPK 1; CDPK 1; Calcium-dependent protein kinase isoform AK1", "protein_names_refseq": "calcium dependent protein kinase 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G04870)", "pathway_count": 1, "publication_count": 33, "publication_id_list": "10747788;10823962;11910074;12068094;12805596;12913141;14593172;15126505;16430916;18463617;19376835;20374526;20466843;21768351;22438062;23111157;23572148;23660473;23776212;24601666;25561503;26091701;27419465;27862469;28011693;29167316;29654922;30833711;7916621;8003490;8855961;9501997;9688575", "class_list": "", "function": "May play a role in signal transduction pathways that involve calcium as a second messenger. Phosphorylates the Ca(2+)-ATPase ACA2 resulting in the inhibition of its calcium activation., [UniProtKB, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 11, "reported_mutagensis": 2, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q541W0", "ec_number_list": [ { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.3.2.27", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.2.27", "type": "external" }, { "id": "2.7.10.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.-", "type": "external" }, { "id": "3.1.4.46", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.4.46", "type": "external" }, { "id": "2.7.11.25", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.25", "type": "external" }, { "id": "2.7.11.22", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.22", "type": "external" }, { "id": "2.7.10.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.1", "type": "external" }, { "id": "2.7.11.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.-", "type": "external" }, { "id": "2.7.11.24", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.24", "type": "external" }, { "id": "2.7.12.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.1", "type": "external" }, { "id": "2.7.11.23", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.23", "type": "external" }, { "id": "2.7.12.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.2", "type": "external" }, { "id": "2.7.-.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.-.-", "type": "external" }, { "id": "3.1.26.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.26.-", "type": "external" }, { "id": "3.1.3.16", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.16", "type": "external" }, { "id": "2.7.11.34", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.34", "type": "external" }, { "id": "4.6.1.2", "url": "https://www.rhea-db.org/rhea/?query=ec:4.6.1.2", "type": "external" } ], "go_molecular_function": "GO:0009931 calcium-dependent protein serine/threonine kinase activity;GO:0004672 protein kinase activity;GO:0004674 protein serine/threonine kinase activity;GO:0005516 calmodulin binding;GO:0005524 ATP binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005777 peroxisome;GO:0005778 peroxisomal membrane;GO:0005886 plasma membrane", "go_biological_process": "GO:0006468 protein phosphorylation;GO:0035556 intracellular signal transduction;GO:0046777 protein autophosphorylation;GO:0043067 regulation of programmed cell death;GO:1900055 regulation of leaf senescence", "synthesized_glycan_count": 0, "hit_score": 3.4, "record_id": "Q06850-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q07098-1", "uniprot_id": [ { "id": "PP2A2_ARATH", "url": "https://www.uniprot.org/uniprot/Q07098", "type": "external" } ], "mass": 34934.0, "length": 306, "protein_name": "Serine/threonine-protein phosphatase PP2A-2 catalytic subunit", "gene_name": "PP2A2", "organism": "Arabidopsis", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "PP2A2; PP2A1; T10O24.4", "gene_names_refseq": "", "protein_names_uniprotkb": "Serine/threonine-protein phosphatase PP2A-2 catalytic subunit; 3.1.3.16; Protein phosphatase 2A isoform 2", "protein_names_refseq": "", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G10430)", "pathway_count": 1, "publication_count": 14, "publication_id_list": "10091592;11130712;14593172;17368080;17617176;22404109;22642987;24357600;25489022;26175513;27862469;28656346;28741704;8382968", "class_list": "", "function": "Dephosphorylates and activates the actin-depolymerizing factor ADF1, which, in turn, regulates actin cytoskeleton remodeling and is involved in the blue light photoreceptor PHOT2-mediated chloroplast avoidance movements (PubMed:22642987). Associates with the serine/threonine-protein phosphatase PP2A regulatory subunits A and B' to positively regulates beta-oxidation of fatty acids and protoauxins in peroxisomes by dephosphorylating peroxisomal beta-oxidation-related proteins (PubMed:25489022). Acts as a negative regulator of abscisic acid (ABA) signaling. May regulate ABA-dependent gene expression (PubMed:17617176). Involved in the light-dependent activation of nitrate reductase (PubMed:28656346)., [UniProtKB, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [ { "id": "3.1.3.16", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.16", "type": "external" }, { "id": "3.1.3.27", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.27", "type": "external" }, { "id": "3.1.3.48", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.48", "type": "external" }, { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.7.13.3", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.13.3", "type": "external" } ], "go_molecular_function": "GO:0046872 metal ion binding;GO:0004722 protein serine/threonine phosphatase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005777 peroxisome;GO:0005829 cytosol;GO:0005886 plasma membrane", "go_biological_process": "GO:0000278 mitotic cell cycle;GO:0032000 positive regulation of fatty acid beta-oxidation;GO:0006470 protein dephosphorylation;GO:0009738 abscisic acid-activated signaling pathway;GO:0009788 negative regulation of abscisic acid-activated signaling pathway", "synthesized_glycan_count": 0, "hit_score": 1.5, "record_id": "Q07098-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q07356-1", "uniprot_id": [ { "id": "PDS_ARATH", "url": "https://www.uniprot.org/uniprot/Q07356", "type": "external" } ], "mass": 62964.0, "length": 566, "protein_name": "15-cis-phytoene desaturase, chloroplastic/chromoplastic", "gene_name": "PDS", "organism": "Arabidopsis", "refseq_name": "phytoene desaturase 3", "refseq_ac": [ { "id": "NP_001319934", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001319934", "type": "external" } ], "gene_names_uniprotkb": "PDS; dl3145c", "gene_names_refseq": "DL3145C; FCAALL.28; PDE226; PDS3; PDS; PHYTOENE DESATURASE; PIGMENT DEFECTIVE 226; phytoene desaturase 3", "protein_names_uniprotkb": "15-cis-phytoene desaturase, chloroplastic/chromoplastic; 1.3.5.5; Phytoene dehydrogenase; Phytoene desaturase", "protein_names_refseq": "phytoene desaturase 3", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G14210)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "10617198;14593172;25561503;27862469;8290648;9461215;9914519", "class_list": "", "function": "Converts phytoene into zeta-carotene via the intermediary of phytofluene by the symmetrical introduction of two double bonds at the C-11 and C-11' positions of phytoene with a concomitant isomerization of two neighboring double bonds at the C9 and C9' positions from trans to cis., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "F4JUN0", "ec_number_list": [ { "id": "1.3.5.5", "url": "https://www.rhea-db.org/rhea/?query=ec:1.3.5.5", "type": "external" } ], "go_molecular_function": "GO:0016166 phytoene dehydrogenase activity", "go_cellular_component": "GO:0005829 cytosol;GO:0016020 membrane;GO:0009507 chloroplast;GO:0009509 chromoplast;GO:0009534 chloroplast thylakoid", "go_biological_process": "GO:0016117 carotenoid biosynthetic process;GO:0016120 carotene biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q07356-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q07473-1", "uniprot_id": [ { "id": "CB4A_ARATH", "url": "https://www.uniprot.org/uniprot/Q07473", "type": "external" } ], "mass": 31139.0, "length": 290, "protein_name": "Chlorophyll a-b binding protein CP29.1, chloroplastic", "gene_name": "LHCB4.1", "organism": "Arabidopsis", "refseq_name": "light harvesting complex photosystem II", "refseq_ac": [ { "id": "NP_195773", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_195773", "type": "external" } ], "gene_names_uniprotkb": "LHCB4.1; F7A7_50", "gene_names_refseq": "F7A7.50; F7A7_50; LHCB4.1; light harvesting complex photosystem II", "protein_names_uniprotkb": "Chlorophyll a-b binding protein CP29.1, chloroplastic; LHCB4.1; LHCII protein 4.1", "protein_names_refseq": "light harvesting complex photosystem II", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G01530)", "pathway_count": 1, "publication_count": 14, "publication_id_list": "11130714;14593172;19245862;19376835;21768351;23111157;24043427;25561503;26091701;27862469;28011693;29167316;30833711;8290636", "class_list": "", "function": "The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 3, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q8RWN1;Q94AD5;Q94K17", "ec_number_list": [], "go_molecular_function": "GO:0003729 mRNA binding;GO:0019904 protein domain specific binding;GO:0046872 metal ion binding;GO:0016168 chlorophyll binding", "go_cellular_component": "GO:0005886 plasma membrane;GO:0009535 chloroplast thylakoid membrane;GO:0009507 chloroplast;GO:0009522 photosystem I;GO:0009523 photosystem II", "go_biological_process": "GO:0009416 response to light stimulus;GO:0009768 photosynthesis, light harvesting in photosystem I", "synthesized_glycan_count": 0, "hit_score": 1.5, "record_id": "Q07473-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q07488-1", "uniprot_id": [ { "id": "BCB1_ARATH", "url": "https://www.uniprot.org/uniprot/Q07488", "type": "external" } ], "mass": 20054.0, "length": 196, "protein_name": "Blue copper protein", "gene_name": "BCB", "organism": "Arabidopsis", "refseq_name": "blue-copper-binding protein", "refseq_ac": [ { "id": "NP_197523", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_197523", "type": "external" } ], "gene_names_uniprotkb": "BCB; AWI 32; F5O24.120", "gene_names_refseq": "ATBCB; BCB; BLUE COPPER BINDING PROTEIN; F5O24.120; F5O24_120; SAG14; SENESCENCE ASSOCIATED GENE 14; blue-copper-binding protein", "protein_names_uniprotkb": "Blue copper protein; AtBCB; Blue copper-binding protein; Phytocyanin 1; Stellacyanin", "protein_names_refseq": "blue-copper-binding protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G20230)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "10769227;11130714;14593172;27862469;8294044;9761472", "class_list": "", "function": "Probably acts as an electron carrier., [UniProtKB]", "predicted_glycosites": 4, "predicted_n_glycosites": 1, "predicted_o_glycosites": 3, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 4, "binding_glycan_count": 0, "secondary_ac_list": "O82664", "ec_number_list": [], "go_molecular_function": "GO:0009055 electron transfer activity;GO:0046872 metal ion binding", "go_cellular_component": "GO:0005576 extracellular region;GO:0005886 plasma membrane;GO:0016020 membrane;GO:0098552 side of membrane;GO:0000325 plant-type vacuole", "go_biological_process": "GO:0070417 cellular response to cold;GO:0006979 response to oxidative stress;GO:0071456 cellular response to hypoxia;GO:0002239 response to oomycetes;GO:0009646 response to absence of light", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q07488-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000011000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q07970-1", "uniprot_id": [ { "id": "KN14C_ARATH", "url": "https://www.uniprot.org/uniprot/Q07970", "type": "external" } ], "mass": 89047.0, "length": 793, "protein_name": "Kinesin-like protein KIN-14C", "gene_name": "KIN14C", "organism": "Arabidopsis", "refseq_name": "kinesin 1", "refseq_ac": [ { "id": "NP_193859", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_193859", "type": "external" } ], "gene_names_uniprotkb": "KIN14C; ATK1; F7J7.210; KATA; T6K22.10", "gene_names_refseq": "ATK1; F7J7.210; F7J7_210; KATAP; KATA; KINESIN-LIKE PROTEIN IN ARABIDOPSIS THALIANA A PROTEIN; KINESIN-LIKE PROTEIN IN ARABIDOPSIS THALIANA A; kinesin 1", "protein_names_uniprotkb": "Kinesin-like protein KIN-14C; AtKIN14a; Kinesin-like protein KatA", "protein_names_refseq": "kinesin 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G21270)", "pathway_count": 1, "publication_count": 12, "publication_id_list": "10617198;11472632;11973272;12112142;12686621;16448571;18088313;22038119;25561503;27862469;8492804;8597656", "class_list": "", "function": "Kinesin that supports microtubule movement in an ATP-dependent manner and has a minus-end directed polarity. Plays a crucial role in spindle morphogenesis in male meiosis. In mitosis, is required for normal microtubule accumulation at the spindle poles during prophase and may play a role in spindle assembly during prometaphase., [UniProtKB, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q7FKK6", "ec_number_list": [], "go_molecular_function": "GO:0005524 ATP binding;GO:0008017 microtubule binding;GO:0016887 ATP hydrolysis activity;GO:0003777 microtubule motor activity;GO:0008569 minus-end-directed microtubule motor activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005819 spindle;GO:0005874 microtubule;GO:0005871 kinesin complex", "go_biological_process": "GO:0051301 cell division;GO:0007018 microtubule-based movement;GO:0051225 spindle assembly;GO:0009971 anastral spindle assembly involved in male meiosis", "synthesized_glycan_count": 0, "hit_score": 1.3, "record_id": "Q07970-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q08298-1", "uniprot_id": [ { "id": "RD22_ARATH", "url": "https://www.uniprot.org/uniprot/Q08298", "type": "external" } ], "mass": 42260.0, "length": 392, "protein_name": "BURP domain protein RD22", "gene_name": "RD22", "organism": "Arabidopsis", "refseq_name": "BURP domain-containing protein", "refseq_ac": [ { "id": "NP_197943", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_197943", "type": "external" } ], "gene_names_uniprotkb": "RD22; T14C9.150", "gene_names_refseq": "ATRD22; RD22; RESPONSIVE TO DESSICATION 22; T14C9.150; T14C9_150", "protein_names_uniprotkb": "BURP domain protein RD22; Dehydration-responsive protein RD22", "protein_names_refseq": "BURP domain-containing protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G25610)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "11130714;14593172;19639386;25333723;26106400;27862469;8479424;9790599", "class_list": "", "function": "Acts to suppress chlorophyll degradation under moisture stress., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q56WL9", "ec_number_list": [], "go_molecular_function": "GO:0003729 mRNA binding", "go_cellular_component": "GO:0005576 extracellular region;GO:0005768 endosome;GO:0005794 Golgi apparatus;GO:0005802 trans-Golgi network", "go_biological_process": "GO:0009651 response to salt stress", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "Q08298-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q08466-1", "uniprot_id": [ { "id": "CSK22_ARATH", "url": "https://www.uniprot.org/uniprot/Q08466", "type": "external" } ], "mass": 47233.0, "length": 403, "protein_name": "Casein kinase II subunit alpha-2", "gene_name": "CKA2", "organism": "Arabidopsis", "refseq_name": "casein kinase II, alpha chain 2", "refseq_ac": [ { "id": "NP_190569", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_190569", "type": "external" } ], "gene_names_uniprotkb": "CKA2; F3A4.80", "gene_names_refseq": "''casein kinase II; ALPHA CHAIN 2; ATCKA2; ATPK15D; CASEIN KINASE II; CKA2; alpha chain 2''; alpha chain 2; casein kinase II", "protein_names_uniprotkb": "Casein kinase II subunit alpha-2; 2.7.11.1; A.t.alphaB; AtCKA2; CK II; Casein kinase alpha 2", "protein_names_refseq": "casein kinase II, alpha chain 2", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G50000)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "11130713;14593172;16926165;19509278;21330376;21900482;27862469;33793856;7678767", "class_list": "", "function": "Casein kinases are operationally defined by their preferential utilization of acidic proteins such as caseins as substrates (By similarity). The alpha chain contains the catalytic site. The tetrameric holoenzyme CK2, composed of two alpha and two beta subunits, phosphorylates the transcription factor PIF1 after an exposure to light, resulting in a proteasome-dependent degradation of PIF1 and promotion of photomorphogenesis (PubMed:21330376). CK2 phosphorylates translation initiation factors. May participate in the regulation of the initiation of translation (PubMed:19509278). Acts as circadian clock component that maintains the correct period length through phosphorylation of CCA1 (PubMed:21900482). Triggers stem cell exhaustion under aluminum (Al) toxicity and phosphate deficiency (Pi) via the activation of the DNA damage response pathway involving SOG1 (PubMed:33793856). May act as an ectokinase that phosphorylates several extracellular proteins (By similarity)., [UniProtKB, PubMed, PubMed, UniProtKB, PubMed, UniProtKB, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 1, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "Q8H120;Q8H765;Q9SN18", "ec_number_list": [ { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.3.2.27", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.2.27", "type": "external" }, { "id": "2.7.10.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.-", "type": "external" }, { "id": "3.1.4.46", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.4.46", "type": "external" }, { "id": "2.7.11.25", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.25", "type": "external" }, { "id": "2.7.11.22", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.22", "type": "external" }, { "id": "2.7.10.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.1", "type": "external" }, { "id": "2.7.11.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.-", "type": "external" }, { "id": "2.7.11.24", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.24", "type": "external" }, { "id": "2.7.12.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.1", "type": "external" }, { "id": "2.7.11.23", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.23", "type": "external" }, { "id": "2.7.12.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.2", "type": "external" }, { "id": "2.7.-.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.-.-", "type": "external" }, { "id": "3.1.26.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.26.-", "type": "external" }, { "id": "3.1.3.16", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.16", "type": "external" }, { "id": "2.7.11.34", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.34", "type": "external" }, { "id": "4.6.1.2", "url": "https://www.rhea-db.org/rhea/?query=ec:4.6.1.2", "type": "external" } ], "go_molecular_function": "GO:0004674 protein serine/threonine kinase activity;GO:0005524 ATP binding;GO:0016301 kinase activity;GO:0106310 protein serine kinase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005730 nucleolus;GO:0005829 cytosol;GO:0005956 protein kinase CK2 complex", "go_biological_process": "GO:0006281 DNA repair;GO:0006468 protein phosphorylation;GO:0010332 response to gamma radiation;GO:0006974 DNA damage response;GO:0007623 circadian rhythm", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "Q08466-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000010000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q08682-1", "uniprot_id": [ { "id": "RSSA1_ARATH", "url": "https://www.uniprot.org/uniprot/Q08682", "type": "external" } ], "mass": 32291.0, "length": 298, "protein_name": "Small ribosomal subunit protein uS2z", "gene_name": "RPSaA", "organism": "Arabidopsis", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "RPSaA; T10D10.16", "gene_names_refseq": "", "protein_names_uniprotkb": "Small ribosomal subunit protein uS2z; 40S ribosomal protein Sa-1; Laminin receptor homolog; p40", "protein_names_refseq": "", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G72370)", "pathway_count": 1, "publication_count": 14, "publication_id_list": "11130712;11598216;14593172;17272265;19376835;22223895;23328941;25561503;27862469;29654922;36423343;8051176;8208855;9426609", "class_list": "", "function": "Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA-precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits., [UniProtKB, HAMAP]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 4, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q93V81", "ec_number_list": [], "go_molecular_function": "GO:0003729 mRNA binding;GO:0003735 structural constituent of ribosome", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0022626 cytosolic ribosome;GO:0015935 small ribosomal subunit;GO:0022627 cytosolic small ribosomal subunit", "go_biological_process": "GO:0006970 response to osmotic stress;GO:0009651 response to salt stress;GO:0002181 cytoplasmic translation;GO:0000028 ribosomal small subunit assembly", "synthesized_glycan_count": 0, "hit_score": 1.5, "record_id": "Q08682-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q09152-1", "uniprot_id": [ { "id": "FPPS1_ARATH", "url": "https://www.uniprot.org/uniprot/Q09152", "type": "external" } ], "mass": 44261.0, "length": 384, "protein_name": "Farnesyl pyrophosphate synthase 1, mitochondrial", "gene_name": "FPS1", "organism": "Arabidopsis", "refseq_name": "farnesyl diphosphate synthase 1", "refseq_ac": [ { "id": "NP_199588", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_199588", "type": "external" } ], "gene_names_uniprotkb": "FPS1; MCA23.9", "gene_names_refseq": "FARNESYL DIPHOSPHATE SYNTHASE 1; FPS1; MCA23.9; MCA23_9; farnesyl diphosphate synthase 1", "protein_names_uniprotkb": "Farnesyl pyrophosphate synthase 1, mitochondrial; (2E,6E)-farnesyl diphosphate synthase 1; 2.5.1.10; 2.5.1.1; Dimethylallyltranstransferase 1; FPP synthase 1; FPS 1; Farnesyl diphosphate synthase 1; Geranyltranstransferase 1", "protein_names_refseq": "farnesyl diphosphate synthase 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G47770)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "10048488;14593172;25561503;27862469;7858223;8631820;9182568", "class_list": "", "function": "Catalyzes the sequential condensation of isopentenyl pyrophosphate with the allylic pyrophosphates, dimethylallyl pyrophosphate, and then with the resultant geranylpyrophosphate to the ultimate product farnesyl pyrophosphate., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q42573;Q8W504;Q93Y84", "ec_number_list": [ { "id": "2.5.1.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.5.1.1", "type": "external" }, { "id": "2.5.1.10", "url": "https://www.rhea-db.org/rhea/?query=ec:2.5.1.10", "type": "external" }, { "id": "2.5.1.29", "url": "https://www.rhea-db.org/rhea/?query=ec:2.5.1.29", "type": "external" }, { "id": "2.5.1.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.5.1.-", "type": "external" } ], "go_molecular_function": "GO:0004161 dimethylallyltranstransferase activity;GO:0004337 (2E,6E)-farnesyl diphosphate synthase activity;GO:0046872 metal ion binding", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005739 mitochondrion;GO:0005829 cytosol;GO:0009536 plastid", "go_biological_process": "GO:0033384 geranyl diphosphate biosynthetic process;GO:0045337 farnesyl diphosphate biosynthetic process;GO:0006695 cholesterol biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q09152-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q0H8D7-1", "uniprot_id": [ { "id": "NBS1_ARATH", "url": "https://www.uniprot.org/uniprot/Q0H8D7", "type": "external" } ], "mass": 60078.0, "length": 542, "protein_name": "Nibrin homolog", "gene_name": "NBS1", "organism": "Arabidopsis", "refseq_name": "nijmegen breakage syndrome 1", "refseq_ac": [ { "id": "NP_186917", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_186917", "type": "external" } ], "gene_names_uniprotkb": "NBS1; F16B3.31", "gene_names_refseq": "ATNBS1; F16B3.31; F16B3_31; NBS1; nijmegen breakage syndrome 1", "protein_names_uniprotkb": "Nibrin homolog; AtNbs1; Nijmegen breakage syndrome 1 protein", "protein_names_refseq": "nijmegen breakage syndrome 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G02680)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "11130713;16202663;17182003;17672843;23111157;27862469;30833711", "class_list": "", "function": "Component of the MRN complex, which plays a central role in double-strand break (DSB) repair, DNA recombination, maintenance of telomere integrity and meiosis (PubMed:17672843). The MRN complex is involved in the repair of DNA double-strand breaks (DSBs) via homologous recombination (HR), an error-free mechanism which primarily occurs during S and G2 phases (PubMed:17672843). The complex (1) mediates the end resection of damaged DNA, which generates proper single-stranded DNA, a key initial steps in HR, and is (2) required for the recruitment of other repair factors and efficient activation of ATM and ATR upon DNA damage (By similarity). The MRN complex possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity, which are provided by MRE11, to initiate end resection, which is required for single-strand invasion and recombination (By similarity). Within the MRN complex, NBS1 acts as a protein-protein adapter, which specifically recognizes and binds phosphorylated proteins, promoting their recruitment to DNA damage sites (By similarity). Recruits MRE11 and RAD50 components of the MRN complex to DSBs in response to DNA damage (By similarity)., [UniProtKB, PubMed, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A1YEB0;Q9M874", "ec_number_list": [], "go_molecular_function": "GO:0003684 damaged DNA binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005694 chromosome;GO:0030870 Mre11 complex", "go_biological_process": "GO:0006312 mitotic recombination;GO:0006974 DNA damage response;GO:0000724 double-strand break repair via homologous recombination;GO:0071479 cellular response to ionizing radiation;GO:0007095 mitotic G2 DNA damage checkpoint signaling", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q0H8D7-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q0WL56-1", "uniprot_id": [ { "id": "EF1A3_ARATH", "url": "https://www.uniprot.org/uniprot/Q0WL56", "type": "external" } ], "mass": 49502.0, "length": 449, "protein_name": "Elongation factor 1-alpha 3", "gene_name": "A3", "organism": "Arabidopsis", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "A3; T6D22.2", "gene_names_refseq": "", "protein_names_uniprotkb": "Elongation factor 1-alpha 3; EF-1-alpha 3; eEF-1A3", "protein_names_refseq": "", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G07920); (ath:AT1G07930); (ath:AT1G07940); (ath:AT5G60390)", "pathway_count": 4, "publication_count": 7, "publication_id_list": "11130712;14593172;17272265;19245862;19292762;2101309;27862469", "class_list": "", "function": "This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A8MSE8;P13905;Q0WSD5", "ec_number_list": [], "go_molecular_function": "GO:0003729 mRNA binding;GO:0003924 GTPase activity;GO:0005525 GTP binding;GO:0003746 translation elongation factor activity", "go_cellular_component": "GO:0005730 nucleolus;GO:0005737 cytoplasm;GO:0005739 mitochondrion;GO:0005829 cytosol;GO:0005886 plasma membrane", "go_biological_process": "GO:0006412 translation;GO:0006414 translational elongation", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q0WL56-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q0WNJ6-1", "uniprot_id": [ { "id": "CLAH1_ARATH", "url": "https://www.uniprot.org/uniprot/Q0WNJ6", "type": "external" } ], "mass": 193245.0, "length": 1705, "protein_name": "Clathrin heavy chain 1", "gene_name": "CHC1", "organism": "Arabidopsis", "refseq_name": "Clathrin, heavy chain", "refseq_ac": [ { "id": "NP_187724", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_187724", "type": "external" } ], "gene_names_uniprotkb": "CHC1; F11B9.30; F9F8.6", "gene_names_refseq": "AtCHC1; CHC1; F11B9.30; clathrin heavy chain 1", "protein_names_uniprotkb": "Clathrin heavy chain 1", "protein_names_refseq": "Clathrin, heavy chain", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G11130)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "11130713;21551390;22223895;23328941;23820729;25561503;27419465;27862469;28751315;30833711", "class_list": "", "function": "Clathrin is the major protein of the polyhedral coat of coated pits and vesicles (By similarity). Mediates endocytosis and is required for a correct polar distribution of PIN auxin transporters., [UniProtKB, UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 5, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q0WM81;Q9SRM1", "ec_number_list": [], "go_molecular_function": "GO:0005198 structural molecule activity;GO:0032051 clathrin light chain binding", "go_cellular_component": "GO:0005794 Golgi apparatus;GO:0005829 cytosol;GO:0005886 plasma membrane;GO:0030130 clathrin coat of trans-Golgi network vesicle;GO:0005773 vacuole", "go_biological_process": "GO:0006886 intracellular protein transport;GO:0006897 endocytosis;GO:0006898 receptor-mediated endocytosis;GO:0016192 vesicle-mediated transport;GO:0072583 clathrin-dependent endocytosis", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "Q0WNJ6-1", "record_type": "protein", "filter_code": "0000000.0000101.010000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q0WNP3-1", "uniprot_id": [ { "id": "PP319_ARATH", "url": "https://www.uniprot.org/uniprot/Q0WNP3", "type": "external" } ], "mass": 69275.0, "length": 617, "protein_name": "Pentatricopeptide repeat-containing protein At4g18520, chloroplastic", "gene_name": "PCMP-A2", "organism": "Arabidopsis", "refseq_name": "Pentatricopeptide repeat (PPR) superfamily protein", "refseq_ac": [ { "id": "NP_193587", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_193587", "type": "external" } ], "gene_names_uniprotkb": "PCMP-A2; F28J12.180; PDM1; SEL1", "gene_names_refseq": "F28J12.180; F28J12_180; SEEDLING LETHAL 1; SEL1", "protein_names_uniprotkb": "Pentatricopeptide repeat-containing protein At4g18520, chloroplastic; Protein PIGMENT-DEFICIENT MUTANT 1; Protein SEEDLING LETHAL 1", "protein_names_refseq": "Pentatricopeptide repeat (PPR) superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G18520)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "10617198;10809006;15269332;24144791;26123918;27862469", "class_list": "", "function": "Required for proper chloroplast development (PubMed:24144791, Ref.7). Involved in the regulation of plastid gene expression probably through regulation of plastid-encoded polymerase (PEP) dependent chloroplast transcription (PubMed:24144791). Required for RNA editing of several chloroplastic transcripts, especially accD transcripts (PubMed:24144791, PubMed:26123918). Required for processing of the chloroplastic rpoA pre-mRNA (Ref.6, Ref.7). Required for the monocistronic rpoA transcript processing from the rpl23-rpl2-rps19-rpl22-rps3-rpl16-rpl14-rps8-rpl36-rps11-rpoA polycistron. Binds the intergenic sequence of rps11-rpoA for rpoA monocistronic RNA cleavage (Ref.7)., [UniProtKB, PubMed, UniProtKB, UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O49520", "ec_number_list": [], "go_molecular_function": "GO:0003723 RNA binding;GO:0003729 mRNA binding", "go_cellular_component": "GO:0009507 chloroplast", "go_biological_process": "GO:0006397 mRNA processing;GO:0008380 RNA splicing;GO:0009451 RNA modification;GO:1900865 chloroplast RNA modification", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q0WNP3-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q0WNZ5-1", "uniprot_id": [ { "id": "METE3_ARATH", "url": "https://www.uniprot.org/uniprot/Q0WNZ5", "type": "external" } ], "mass": 90594.0, "length": 812, "protein_name": "5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 3, chloroplastic", "gene_name": "MS3", "organism": "Arabidopsis", "refseq_name": "methionine synthase 3", "refseq_ac": [ { "id": "NP_001078611", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001078611", "type": "external" } ], "gene_names_uniprotkb": "MS3; F22D1", "gene_names_refseq": "ATMS3; F22D1.150; F22D1_150; MS3; methionine synthase 3", "protein_names_uniprotkb": "5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 3, chloroplastic; 2.1.1.14; AtMS3; Cobalamin-independent methionine synthase 3", "protein_names_refseq": "methionine synthase 3", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G20980)", "pathway_count": 1, "publication_count": 14, "publication_id_list": "11130714;15024005;18463617;20466843;22438062;23111157;23572148;23776212;24601666;25561503;26091701;27862469;29167316;30833711", "class_list": "", "function": "Catalyzes the transfer of a methyl group from 5-methyltetrahydrofolate to homocysteine resulting in methionine formation., [UniProtKB, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 4, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "Q6KCR0", "ec_number_list": [ { "id": "2.1.1.14", "url": "https://www.rhea-db.org/rhea/?query=ec:2.1.1.14", "type": "external" } ], "go_molecular_function": "GO:0008705 methionine synthase activity;GO:0008270 zinc ion binding;GO:0003871 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity", "go_cellular_component": "GO:0005829 cytosol;GO:0009507 chloroplast", "go_biological_process": "GO:0032259 methylation;GO:0009086 methionine biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 1.5, "record_id": "Q0WNZ5-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000001001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q0WP36-1", "uniprot_id": [ { "id": "MOT2_ARATH", "url": "https://www.uniprot.org/uniprot/Q0WP36", "type": "external" } ], "mass": 49551.0, "length": 464, "protein_name": "Molybdate transporter 2", "gene_name": "MOT2", "organism": "Arabidopsis", "refseq_name": "sulfate transmembrane transporter", "refseq_ac": [ { "id": "NP_178147", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_178147", "type": "external" } ], "gene_names_uniprotkb": "MOT2; F5I6.6; ST5.1; SULTR5.1", "gene_names_refseq": "F5I6.6; F5I6_6; MOT2; molybdate transporter 2", "protein_names_uniprotkb": "Molybdate transporter 2; Sulfate transporter like protein 5.1", "protein_names_refseq": "sulfate transmembrane transporter", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G80310)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "11130712;14593172;19423640;21131548;21815974;27862469", "class_list": "", "function": "Molybdate transporter required for vacuolar molybdate export during senescence., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "C0Z3C0;Q9C973", "ec_number_list": [], "go_molecular_function": "GO:0015098 molybdate ion transmembrane transporter activity", "go_cellular_component": "GO:0005739 mitochondrion;GO:0005774 vacuolar membrane;GO:0000325 plant-type vacuole;GO:0009705 plant-type vacuole membrane", "go_biological_process": "GO:0015689 molybdate ion transport;GO:0090414 molybdate ion export from vacuole", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q0WP36-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q0WPA5-1", "uniprot_id": [ { "id": "MSR2_ARATH", "url": "https://www.uniprot.org/uniprot/Q0WPA5", "type": "external" } ], "mass": 47142.0, "length": 423, "protein_name": "Protein MANNAN SYNTHESIS-RELATED 2", "gene_name": "MSR2", "organism": "Arabidopsis", "refseq_name": "O-fucosyltransferase family protein", "refseq_ac": [ { "id": "NP_175574", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_175574", "type": "external" } ], "gene_names_uniprotkb": "MSR2; F19C24.14; OFUT12", "gene_names_refseq": "AtMSR2; F19C24.14; F19C24_14; MSR2; Mannan Synthesis Related 2", "protein_names_uniprotkb": "Protein MANNAN SYNTHESIS-RELATED 2; 2.4.1.-; AtMSR2; O-FucT-12; O-fucosyltransferase 12; O-fucosyltransferase family protein", "protein_names_refseq": "O-fucosyltransferase family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G51630)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "11130712;22629278;22966747;23272088;24905498;27862469", "class_list": "glycogene;glycosyltransferase", "function": "Glycosyltransferase involved in mannan biosynthesis., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9C8H5", "ec_number_list": [], "go_molecular_function": "GO:0051753 mannan synthase activity", "go_cellular_component": "GO:0000139 Golgi membrane;GO:0005768 endosome;GO:0005794 Golgi apparatus;GO:0005797 Golgi medial cisterna;GO:0005802 trans-Golgi network", "go_biological_process": "GO:0006004 fucose metabolic process;GO:0046354 mannan biosynthetic process;GO:0052325 cell wall pectin biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q0WPA5-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.11000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q0WPF2-1", "uniprot_id": [ { "id": "PCFS4_ARATH", "url": "https://www.uniprot.org/uniprot/Q0WPF2", "type": "external" } ], "mass": 89228.0, "length": 808, "protein_name": "Polyadenylation and cleavage factor homolog 4", "gene_name": "PCFS4", "organism": "Arabidopsis", "refseq_name": "PCF11P-similar protein 4", "refseq_ac": [ { "id": "NP_680598", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_680598", "type": "external" } ], "gene_names_uniprotkb": "PCFS4; T4B21.1", "gene_names_refseq": "PCF11P-similar protein 4; PCFS4", "protein_names_uniprotkb": "Polyadenylation and cleavage factor homolog 4", "protein_names_refseq": "PCF11P-similar protein 4", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G04885)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "10617198;11910074;15236668;18298670;18479511;21364912;27862469", "class_list": "", "function": "Promotes flowering by suppressing FLC-mediated inhibition of flowering through the regulation of FCA pre-mRNA alternative processing (PubMed:18298670). Regulates mRNA maturation including alternative polyadenylation, splicing or transcription initiation of stress-associated genes (PubMed:21364912)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q8GW12;Q9ZS85", "ec_number_list": [], "go_molecular_function": "GO:0003729 mRNA binding;GO:0008270 zinc ion binding;GO:0000993 RNA polymerase II complex binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005849 mRNA cleavage factor complex", "go_biological_process": "GO:0006397 mRNA processing;GO:0006369 termination of RNA polymerase II transcription;GO:0031124 mRNA 3'-end processing;GO:0031440 regulation of mRNA 3'-end processing;GO:0009908 flower development", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q0WPF2-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q0WPH8-1", "uniprot_id": [ { "id": "NEK5_ARATH", "url": "https://www.uniprot.org/uniprot/Q0WPH8", "type": "external" } ], "mass": 106390.0, "length": 956, "protein_name": "Serine/threonine-protein kinase Nek5", "gene_name": "NEK5", "organism": "Arabidopsis", "refseq_name": "serine/threonine-protein kinase NEK5", "refseq_ac": [ { "id": "NP_001327688", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001327688", "type": "external" } ], "gene_names_uniprotkb": "NEK5; F26G5.150; NEK6", "gene_names_refseq": "''NIMA (never in mitosis; ATNEK6; IBO1; NEK6; NIMA (never in mitosis; NIMA-RELATED KINASE6; gene A)-related 6''; gene A)-related 6", "protein_names_uniprotkb": "Serine/threonine-protein kinase Nek5; 2.7.11.1; AtNEK6; AtNek5; NimA-related protein kinase 5", "protein_names_refseq": "serine/threonine-protein kinase NEK5", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G44200)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "11130713;17886359;17971038;22060019;22074104;23111157;23776212;25561503;27862469", "class_list": "", "function": "Involved in epidermal-cell morphogenesis in hypocotyls and roots. May act on the microtubule function. May have a secondary role in trichome branching., [UniProtKB, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 16, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A9CP44;Q9LXP3", "ec_number_list": [ { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.3.2.27", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.2.27", "type": "external" }, { "id": "2.7.10.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.-", "type": "external" }, { "id": "3.1.4.46", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.4.46", "type": "external" }, { "id": "2.7.11.25", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.25", "type": "external" }, { "id": "2.7.11.22", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.22", "type": "external" }, { "id": "2.7.10.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.1", "type": "external" }, { "id": "2.7.11.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.-", "type": "external" }, { "id": "2.7.11.24", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.24", "type": "external" }, { "id": "2.7.12.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.1", "type": "external" }, { "id": "2.7.11.23", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.23", "type": "external" }, { "id": "2.7.12.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.2", "type": "external" }, { "id": "2.7.-.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.-.-", "type": "external" }, { "id": "3.1.26.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.26.-", "type": "external" }, { "id": "3.1.3.16", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.16", "type": "external" }, { "id": "2.7.11.34", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.34", "type": "external" }, { "id": "4.6.1.2", "url": "https://www.rhea-db.org/rhea/?query=ec:4.6.1.2", "type": "external" } ], "go_molecular_function": "GO:0004672 protein kinase activity;GO:0004674 protein serine/threonine kinase activity;GO:0005524 ATP binding;GO:0106310 protein serine kinase activity", "go_cellular_component": "GO:0055028 cortical microtubule;GO:0005886 plasma membrane", "go_biological_process": "GO:0007017 microtubule-based process;GO:0043622 cortical microtubule organization;GO:0090627 plant epidermal cell differentiation", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "Q0WPH8-1", "record_type": "protein", "filter_code": "0000000.0000101.010000.100000000000000000.0000000001001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q0WPN7-1", "uniprot_id": [ { "id": "CGR3_ARATH", "url": "https://www.uniprot.org/uniprot/Q0WPN7", "type": "external" } ], "mass": 28296.0, "length": 258, "protein_name": "Probable pectin methylesterase CGR3", "gene_name": "CGR3", "organism": "Arabidopsis", "refseq_name": "uncharacterized protein", "refseq_ac": [ { "id": "NP_569020", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_569020", "type": "external" } ], "gene_names_uniprotkb": "CGR3; K22J17.2", "gene_names_refseq": "CGR3; K22J17.2; K22J17_2; cotton Golgi-related 3", "protein_names_uniprotkb": "Probable pectin methylesterase CGR3; 2.1.1.-; Cotton Golgi-related 3", "protein_names_refseq": "uncharacterized protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G65810)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "10718197;19253305;21422118;25704846;27208234;27862469", "class_list": "", "function": "Together with CGR2, required for homogalacturonan pectins (HG) methylesterification in the Golgi apparatus prior to integration into cell walls, essential for general growth and development (PubMed:21422118, PubMed:25704846, PubMed:27208234). Promotes petiole elongation (PubMed:21422118). Impacts photosynthesis and respiration efficiency by influencing leaf mesophyll morphology and physiology; pectin methylesterification modulates both expansion and positioning of cells in leaves, probably by changing cell walls plasticity (PubMed:27208234)., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 1, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 3, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "Q8LAU7;Q9FH88", "ec_number_list": [], "go_molecular_function": "GO:0008168 methyltransferase activity", "go_cellular_component": "GO:0000139 Golgi membrane;GO:0005634 nucleus;GO:0005768 endosome;GO:0005794 Golgi apparatus;GO:0005802 trans-Golgi network", "go_biological_process": "GO:0048639 positive regulation of developmental growth;GO:0032259 methylation;GO:1903942 positive regulation of respiratory gaseous exchange;GO:0015976 carbon utilization;GO:0009664 plant-type cell wall organization", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q0WPN7-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000010001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q0WPX9-1", "uniprot_id": [ { "id": "P4KB2_ARATH", "url": "https://www.uniprot.org/uniprot/Q0WPX9", "type": "external" } ], "mass": 126242.0, "length": 1116, "protein_name": "Phosphatidylinositol 4-kinase beta 2", "gene_name": "PI4KB2", "organism": "Arabidopsis", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "PI4KB2; PI4KBETA2; T5E8.150", "gene_names_refseq": "", "protein_names_uniprotkb": "Phosphatidylinositol 4-kinase beta 2; 2.7.1.67; AtPI4Kbeta2; PI-4Kbeta2; PI4-kinase beta 2; Phosphatidylinositol 4-OH kinase beta2; PtdIns-4-kinase beta 2", "protein_names_refseq": "", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G09350)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "11130714;12226484;16567499;19208902;21134079;22318862;22899063;25561503;27862469", "class_list": "", "function": "Acts on phosphatidylinositol (PtdIns) in the first committed step in the production of the second messenger inositol-1,4,5-trisphosphate (By similarity). Necessary for proper organization of the trans-Golgi network (TGN) and post-Golgi secretion in root hairs. Together with PI4KB1, required during polarized root hair expansion and pollen tube elongation. Functions redundantly with PI4KB1 upstream of the cold response phosphoinositide-dependent phospholipase C (PI-PLC) pathway., [UniProtKB, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 4, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "Q9FY80", "ec_number_list": [ { "id": "2.7.1.67", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.67", "type": "external" } ], "go_molecular_function": "GO:0004430 1-phosphatidylinositol 4-kinase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005794 Golgi apparatus;GO:0005886 plasma membrane;GO:0016020 membrane", "go_biological_process": "GO:0048015 phosphatidylinositol-mediated signaling;GO:0006661 phosphatidylinositol biosynthetic process;GO:0046854 phosphatidylinositol phosphate biosynthetic process;GO:0009860 pollen tube growth;GO:0048768 root hair cell tip growth", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "Q0WPX9-1", "record_type": "protein", "filter_code": "0000000.0000101.010000.100000000000000000.0000000001001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q0WPZ7-1", "uniprot_id": [ { "id": "GLE1_ARATH", "url": "https://www.uniprot.org/uniprot/Q0WPZ7", "type": "external" } ], "mass": 69640.0, "length": 611, "protein_name": "mRNA export factor GLE1", "gene_name": "GLE1", "organism": "Arabidopsis", "refseq_name": "nucleoporin GLE1-like protein", "refseq_ac": [ { "id": "NP_172771", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_172771", "type": "external" } ], "gene_names_uniprotkb": "GLE1; EMB1745; F3F19.14", "gene_names_refseq": "A. thaliana homolog of yeast GLE1; AtGLE1; F3F19.14; F3F19_14; GLE1; embryo defective 1745", "protein_names_uniprotkb": "mRNA export factor GLE1; AtGLE1; GLE1-like protein; Nucleoporin GLE1; Protein EMBRYO DEFECTIVE 1745; Protein GLE1", "protein_names_refseq": "nucleoporin GLE1-like protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G13120)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "11130712;21189294;22898497;27862469", "class_list": "", "function": "Required for seed viability., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9SAE5", "ec_number_list": [], "go_molecular_function": "GO:0005543 phospholipid binding;GO:0000822 inositol hexakisphosphate binding;GO:0031369 translation initiation factor binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005635 nuclear envelope;GO:0005737 cytoplasm;GO:0044614 nuclear pore cytoplasmic filaments", "go_biological_process": "GO:0016973 poly(A)+ mRNA export from nucleus;GO:0015031 protein transport;GO:0048316 seed development", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "Q0WPZ7-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q0WQ41-1", "uniprot_id": [ { "id": "IP5P7_ARATH", "url": "https://www.uniprot.org/uniprot/Q0WQ41", "type": "external" } ], "mass": 68245.0, "length": 594, "protein_name": "Type IV inositol polyphosphate 5-phosphatase 7", "gene_name": "IP5P7", "organism": "Arabidopsis", "refseq_name": "CVP2 like 1", "refseq_ac": [ { "id": "NP_001189654", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001189654", "type": "external" } ], "gene_names_uniprotkb": "IP5P7; CVL1; F22D22.24; IPP4", "gene_names_refseq": "CVL1; CVP2 like 1; F22D22.24; F22D22_24", "protein_names_uniprotkb": "Type IV inositol polyphosphate 5-phosphatase 7; 3.1.3.36; 3.1.3.86; At5PTase7; Protein CVL1; Protein CVP2 LIKE 1", "protein_names_refseq": "CVP2 like 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G32010)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "10617197;11402208;19363154;19473324;21677096;23658066;25813544;27862469", "class_list": "", "function": "Has phosphatase activity toward PtdIns(4,5)P2 and at a lower extent toward PtdIns(3,4,5)P3 but not toward Ins(1,4,5)P3 (PubMed:19473324, PubMed:21677096, PubMed:23658066). Acts redundantly with CVP2 for maintaining vascular continuity (PubMed:19363154, PubMed:25813544). Regulates phosphoinositide-dependent VAN3 localization (PubMed:19473324). Functions in salt stress response by regulating reactive oxygen species (ROS) production and stress-responsive genes expression (PubMed:21677096)., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q712G2;Q9SKZ8", "ec_number_list": [ { "id": "3.1.3.86", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.86", "type": "external" }, { "id": "3.1.3.36", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.36", "type": "external" } ], "go_molecular_function": "GO:0004439 phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity;GO:0004445 inositol-polyphosphate 5-phosphatase activity;GO:0034485 phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005886 plasma membrane", "go_biological_process": "GO:2000377 regulation of reactive oxygen species metabolic process;GO:0071472 cellular response to salt stress;GO:0046856 phosphatidylinositol dephosphorylation;GO:0010305 leaf vascular tissue pattern formation", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "Q0WQ41-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q0WQW5-1", "uniprot_id": [ { "id": "PPR85_ARATH", "url": "https://www.uniprot.org/uniprot/Q0WQW5", "type": "external" } ], "mass": 71960.0, "length": 638, "protein_name": "Pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondrial", "gene_name": "PCMP-H51", "organism": "Arabidopsis", "refseq_name": "Tetratricopeptide repeat (TPR)-like superfamily protein", "refseq_ac": [ { "id": "NP_176180", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_176180", "type": "external" } ], "gene_names_uniprotkb": "PCMP-H51; CRR28; F23H11.3; T30E16.32", "gene_names_refseq": "CHLORORESPIRATORY REDUCTION28; CRR28; F23H11.3; F23H11_3", "protein_names_uniprotkb": "Pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondrial; Protein CHLORORESPIRATORY REDUCTION 28", "protein_names_refseq": "Tetratricopeptide repeat (TPR)-like superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G59720)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "10809006;11130712;15269332;19182104;23487777;25768119;27862469", "class_list": "", "function": "Involved in multiple sites RNA editing events in chloroplasts. Involved in the editing of the site 2 of ndhB (ndhB-2) and site 3 of ndhD (ndhD-3) transcripts, which are two plastid-encoded subunits of the chloroplast NAD(P)H dehydrogenase (NDH) complex. Required for the activity of the NDH complex of the photosynthetic electron transport chain., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9LQ42;Q9XIF6", "ec_number_list": [], "go_molecular_function": "GO:0003723 RNA binding;GO:0008270 zinc ion binding;GO:0004519 endonuclease activity", "go_cellular_component": "GO:0005739 mitochondrion;GO:0009507 chloroplast", "go_biological_process": "GO:0006397 mRNA processing;GO:0016556 mRNA modification", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q0WQW5-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q0WQX9-1", "uniprot_id": [ { "id": "WAVH2_ARATH", "url": "https://www.uniprot.org/uniprot/Q0WQX9", "type": "external" } ], "mass": 78579.0, "length": 717, "protein_name": "Probable E3 ubiquitin-protein ligase WAVH2", "gene_name": "WAVH2", "organism": "Arabidopsis", "refseq_name": "Zinc finger (C3HC4-type RING finger) family protein", "refseq_ac": [ { "id": "NP_680467", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_680467", "type": "external" } ], "gene_names_uniprotkb": "WAVH2; F6H11.200", "gene_names_refseq": "WAV3 homolog 2; WAVH2", "protein_names_uniprotkb": "Probable E3 ubiquitin-protein ligase WAVH2; 2.3.2.27; Protein WAV3 homolog 2; RING-type E3 ubiquitin transferase WAVH2", "protein_names_refseq": "Zinc finger (C3HC4-type RING finger) family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G65683)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "11130714;11910074;14593172;22122664;25561503;27862469;9628582", "class_list": "", "function": "Probable E3 ubiquitin-protein ligase involved in the regulation of root growth. Acts as a positive regulator of root gravitropism., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O49548;Q8GY95", "ec_number_list": [], "go_molecular_function": "GO:0008270 zinc ion binding;GO:0061630 ubiquitin protein ligase activity", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0009630 gravitropism;GO:0048364 root development", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q0WQX9-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q0WRY5-1", "uniprot_id": [ { "id": "PBL7_ARATH", "url": "https://www.uniprot.org/uniprot/Q0WRY5", "type": "external" } ], "mass": 41672.0, "length": 378, "protein_name": "Probable serine/threonine-protein kinase PBL7", "gene_name": "PBL7", "organism": "Arabidopsis", "refseq_name": "Protein kinase superfamily protein", "refseq_ac": [ { "id": "NP_195900", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_195900", "type": "external" } ], "gene_names_uniprotkb": "PBL7; CDL1; F9G14.110", "gene_names_refseq": "CDG1-like 1; CDL1; F9G14.110; F9G14_110", "protein_names_uniprotkb": "Probable serine/threonine-protein kinase PBL7; 2.7.11.1; CDG1-like protein 1; PBS1-like protein 7", "protein_names_refseq": "Protein kinase superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G02800)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "11130714;20413097;21855796;23111157;25561503;27862469", "class_list": "", "function": "Serine/threonine-protein kinase involved in the positive regulation of brassinosteroid (BR) signaling and plant growth. Phosphorylates both BSU1 and BSL1 in vitro., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 13, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9LZ05", "ec_number_list": [ { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.3.2.27", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.2.27", "type": "external" }, { "id": "2.7.10.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.-", "type": "external" }, { "id": "3.1.4.46", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.4.46", "type": "external" }, { "id": "2.7.11.25", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.25", "type": "external" }, { "id": "2.7.11.22", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.22", "type": "external" }, { "id": "2.7.10.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.1", "type": "external" }, { "id": "2.7.11.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.-", "type": "external" }, { "id": "2.7.11.24", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.24", "type": "external" }, { "id": "2.7.12.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.1", "type": "external" }, { "id": "2.7.11.23", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.23", "type": "external" }, { "id": "2.7.12.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.2", "type": "external" }, { "id": "2.7.-.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.-.-", "type": "external" }, { "id": "3.1.26.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.26.-", "type": "external" }, { "id": "3.1.3.16", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.16", "type": "external" }, { "id": "2.7.11.34", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.34", "type": "external" }, { "id": "4.6.1.2", "url": "https://www.rhea-db.org/rhea/?query=ec:4.6.1.2", "type": "external" } ], "go_molecular_function": "GO:0004672 protein kinase activity;GO:0004674 protein serine/threonine kinase activity;GO:0005524 ATP binding;GO:0106310 protein serine kinase activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005886 plasma membrane", "go_biological_process": "GO:0006468 protein phosphorylation;GO:0009742 brassinosteroid mediated signaling pathway;GO:1900459 positive regulation of brassinosteroid mediated signaling pathway", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q0WRY5-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q0WSH6-1", "uniprot_id": [ { "id": "PP312_ARATH", "url": "https://www.uniprot.org/uniprot/Q0WSH6", "type": "external" } ], "mass": 75889.0, "length": 684, "protein_name": "Pentatricopeptide repeat-containing protein At4g14850", "gene_name": "LOI1", "organism": "Arabidopsis", "refseq_name": "Pentatricopeptide repeat (PPR) superfamily protein", "refseq_ac": [ { "id": "NP_193221", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_193221", "type": "external" } ], "gene_names_uniprotkb": "LOI1; FCAALL.335; PCMP-H4; dl3465w", "gene_names_refseq": "DL3465W; FCAALL.335; LOI1; MEF11; lovastatin insensitive 1; mitochondrial RNA editing factor 11", "protein_names_uniprotkb": "Pentatricopeptide repeat-containing protein At4g14850; Protein LOVASTATIN INSENSITIVE 1", "protein_names_refseq": "Pentatricopeptide repeat (PPR) superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G14850)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "10617198;10809006;14593172;15269332;17213228;27862469;9461215", "class_list": "", "function": "Acts as a regulatory factor of isoprenoid biosynthesis. Could bind RNA., [UniProtKB, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "O23340;Q6NQI9", "ec_number_list": [], "go_molecular_function": "GO:0003723 RNA binding;GO:0003729 mRNA binding;GO:0008270 zinc ion binding;GO:0000166 nucleotide binding;GO:0034046 poly(G) binding", "go_cellular_component": "GO:0005739 mitochondrion", "go_biological_process": "GO:0016125 sterol metabolic process;GO:0009451 RNA modification;GO:0019287 isopentenyl diphosphate biosynthetic process, mevalonate pathway;GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway;GO:0048364 root development", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q0WSH6-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000001001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q0WUA3-1", "uniprot_id": [ { "id": "MENA_ARATH", "url": "https://www.uniprot.org/uniprot/Q0WUA3", "type": "external" } ], "mass": 42037.0, "length": 382, "protein_name": "2-carboxy-1,4-naphthoquinone phytyltransferase, chloroplastic", "gene_name": "ABC4", "organism": "Arabidopsis", "refseq_name": "UbiA prenyltransferase family protein", "refseq_ac": [ { "id": "NP_001117518", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001117518", "type": "external" } ], "gene_names_uniprotkb": "ABC4; F8A5.36", "gene_names_refseq": "1; 4-DIHYDROXY-2-NAPTHOIC ACID PHYTYLTRANSFERASE; ABC4; ABERRANT CHLOROPLAST DEVELOPMENT 4; F8A5.36; F8A5_36", "protein_names_uniprotkb": "2-carboxy-1,4-naphthoquinone phytyltransferase, chloroplastic; 1,4-dihydroxy-2-naphthoate phytyltransferase; 1,4-dihydroxy-2-naphthoate polyprenyltransferase; 2.5.1.130; AtMENA; Protein ABERRANT CHLOROPLAST DEVELOPMENT 4; menA-like protein", "protein_names_refseq": "UbiA prenyltransferase family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G60600)", "pathway_count": 1, "publication_count": 3, "publication_id_list": "11130712;15686525;27862469", "class_list": "", "function": "Involved in the synthesis of phylloquinone (vitamin K1). Catalyzes the transfer of a prenyl chain to 2-carboxy-1,4-naphthoquinone., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q6NLY2", "ec_number_list": [ { "id": "2.5.1.130", "url": "https://www.rhea-db.org/rhea/?query=ec:2.5.1.130", "type": "external" } ], "go_molecular_function": "GO:0004659 prenyltransferase activity;GO:0046428 1,4-dihydroxy-2-naphthoate polyprenyltransferase activity", "go_cellular_component": "GO:0005886 plasma membrane;GO:0009507 chloroplast;GO:0031969 chloroplast membrane", "go_biological_process": "GO:0006744 ubiquinone biosynthetic process;GO:0010236 plastoquinone biosynthetic process;GO:0042372 phylloquinone biosynthetic process;GO:0009772 photosynthetic electron transport in photosystem II", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "Q0WUA3-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q0WUY1-1", "uniprot_id": [ { "id": "NADKC_ARATH", "url": "https://www.uniprot.org/uniprot/Q0WUY1", "type": "external" } ], "mass": 59977.0, "length": 534, "protein_name": "Calmodulin calcium-dependent NAD kinase", "gene_name": "NADKC", "organism": "Arabidopsis", "refseq_name": "P-loop containing nucleoside triphosphate hydrolases superfamily protein", "refseq_ac": [ { "id": "NP_001322810", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001322810", "type": "external" } ], "gene_names_uniprotkb": "NADKC; F19P19.28; H1FLK", "gene_names_refseq": "F19P19.28; F19P19_28", "protein_names_uniprotkb": "Calmodulin calcium-dependent NAD kinase; 2.7.1.23; NAD kinase-CaM dependent protein; NADKc", "protein_names_refseq": "P-loop containing nucleoside triphosphate hydrolases superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G04280)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "11130712;1765064;19376835;22074104;23111157;23660473;23776212;25561503;27862469;31554701", "class_list": "", "function": "Phosphorylates NAD(+) to produce NADP(+) in a calmodulin calcium-dependent manner (PubMed:31554701). Does not possess activity toward NADH (PubMed:31554701). Has broad specificity for the phosphoryl donor, as ATP, CTP, GTP and UTP can be used interchangeably and produce similar efficiencies (PubMed:31554701). May play a role in producing NADP(H) needed to regulate the elicitor-induced reactive oxygen species (ROS) burst by sustaining the activity of NADPH oxidases (PubMed:31554701). Does not seem to play a role in photosynthesis-driven growth (PubMed:31554701)., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 4, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q7DM36;Q7GB61", "ec_number_list": [ { "id": "2.7.1.23", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.23", "type": "external" }, { "id": "2.7.1.86", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.86", "type": "external" } ], "go_molecular_function": "GO:0003951 NAD+ kinase activity;GO:0005516 calmodulin binding;GO:0005524 ATP binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005741 mitochondrial outer membrane", "go_biological_process": "GO:0006741 NADP+ biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "Q0WUY1-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q0WV25-1", "uniprot_id": [ { "id": "TBA4_ARATH", "url": "https://www.uniprot.org/uniprot/Q0WV25", "type": "external" } ], "mass": 49541.0, "length": 450, "protein_name": "Tubulin alpha-4 chain", "gene_name": "TUBA4", "organism": "Arabidopsis", "refseq_name": "tubulin alpha-4 chain", "refseq_ac": [ { "id": "NP_171974", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_171974", "type": "external" } ], "gene_names_uniprotkb": "TUBA4; F13M7.19; TUA4", "gene_names_refseq": "F13M7.19; TOR2; TORTIFOLIA 2; TUA4; tubulin alpha-4 chain", "protein_names_uniprotkb": "Tubulin alpha-4 chain; 3.6.5.-", "protein_names_refseq": "tubulin alpha-4 chain", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G04820); (ath:AT1G50010)", "pathway_count": 2, "publication_count": 5, "publication_id_list": "11130712;14593172;1498608;27862469;28154133", "class_list": "", "function": "Tubulin is the major constituent of microtubules, a cylinder consisting of laterally associated linear protofilaments composed of alpha- and beta-tubulin heterodimers. Microtubules grow by the addition of GTP-tubulin dimers to the microtubule end, where a stabilizing cap forms. Below the cap, tubulin dimers are in GDP-bound state, owing to GTPase activity of alpha-tubulin., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 1, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 1, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 1, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 1, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 0, "biomarker_type": "", "glycan_count": 1, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "P29510", "ec_number_list": [ { "id": "3.6.5.2", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.5.2", "type": "external" }, { "id": "3.6.5.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.5.-", "type": "external" }, { "id": "3.6.5.3", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.5.3", "type": "external" }, { "id": "3.6.5.4", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.5.4", "type": "external" }, { "id": "3.6.5.5", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.5.5", "type": "external" }, { "id": "3.6.5.n1", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.5.n1", "type": "external" } ], "go_molecular_function": "GO:0003729 mRNA binding;GO:0005200 structural constituent of cytoskeleton;GO:0005525 GTP binding;GO:0016787 hydrolase activity;GO:0046872 metal ion binding", "go_cellular_component": "GO:0005576 extracellular region;GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005829 cytosol;GO:0005874 microtubule", "go_biological_process": "GO:0000278 mitotic cell cycle;GO:0000226 microtubule cytoskeleton organization;GO:0007017 microtubule-based process;GO:0071258 cellular response to gravity", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q0WV25-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0100000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q0WVF5-1", "uniprot_id": [ { "id": "MCM4_ARATH", "url": "https://www.uniprot.org/uniprot/Q0WVF5", "type": "external" } ], "mass": 93656.0, "length": 847, "protein_name": "DNA replication licensing factor MCM4", "gene_name": "MCM4", "organism": "Arabidopsis", "refseq_name": "Minichromosome maintenance (MCM2/3/5) family protein", "refseq_ac": [ { "id": "NP_179236", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_179236", "type": "external" } ], "gene_names_uniprotkb": "MCM4; F16F14.6", "gene_names_refseq": "F16F14.6; F16F14_6; MCM4; MINICHROMOSOME MAINTENANCE 4", "protein_names_uniprotkb": "DNA replication licensing factor MCM4; 3.6.4.12; AtMCM4; Minichromosome maintenance protein 4", "protein_names_refseq": "Minichromosome maintenance (MCM2/3/5) family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G16440)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "10617197;17556508;18463617;18528439;19357199;20466843;22060019;25561503;27862469;30833711", "class_list": "", "function": "Probable component of the MCM2-7 complex (MCM complex) that may function as a DNA helicase and which is essential to undergo a single round of replication initiation and elongation per cell cycle in eukaryotic cells., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 7, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9SIV8", "ec_number_list": [ { "id": "3.1.-.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.-.-", "type": "external" }, { "id": "5.6.2.3", "url": "https://www.rhea-db.org/rhea/?query=ec:5.6.2.3", "type": "external" }, { "id": "3.6.4.12", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.4.12", "type": "external" }, { "id": "3.6.-.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.-.-", "type": "external" }, { "id": "2.7.7.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.7.-", "type": "external" }, { "id": "3.6.4.13", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.4.13", "type": "external" }, { "id": "5.6.2.4", "url": "https://www.rhea-db.org/rhea/?query=ec:5.6.2.4", "type": "external" }, { "id": "5.6.2.-", "url": "https://www.rhea-db.org/rhea/?query=ec:5.6.2.-", "type": "external" }, { "id": "3.6.1.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.1.-", "type": "external" }, { "id": "3.6.4.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.4.-", "type": "external" }, { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.7.4.3", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.4.3", "type": "external" }, { "id": "5.6.2.5", "url": "https://www.rhea-db.org/rhea/?query=ec:5.6.2.5", "type": "external" }, { "id": "7.2.2.-", "url": "https://www.rhea-db.org/rhea/?query=ec:7.2.2.-", "type": "external" }, { "id": "3.6.4.6", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.4.6", "type": "external" }, { "id": "3.6.1.25", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.1.25", "type": "external" } ], "go_molecular_function": "GO:0005524 ATP binding;GO:0008270 zinc ion binding;GO:0016887 ATP hydrolysis activity;GO:0003697 single-stranded DNA binding;GO:0003678 DNA helicase activity", "go_cellular_component": "GO:0000347 THO complex;GO:0005634 nucleus;GO:0000785 chromatin;GO:0042555 MCM complex;GO:0009507 chloroplast", "go_biological_process": "GO:0006271 DNA strand elongation involved in DNA replication;GO:0006260 DNA replication;GO:1902975 mitotic DNA replication initiation;GO:0000727 double-strand break repair via break-induced replication;GO:0009555 pollen development", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "Q0WVF5-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q0WVM7-1", "uniprot_id": [ { "id": "SLK1_ARATH", "url": "https://www.uniprot.org/uniprot/Q0WVM7", "type": "external" } ], "mass": 83314.0, "length": 748, "protein_name": "Probable transcriptional regulator SLK1", "gene_name": "SLK1", "organism": "Arabidopsis", "refseq_name": "SEUSS-like 1", "refseq_ac": [ { "id": "NP_001320064", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001320064", "type": "external" } ], "gene_names_uniprotkb": "SLK1; M7J2.110", "gene_names_refseq": "M7J2.110; M7J2_110; SEUSS-like 1; SLK1", "protein_names_uniprotkb": "Probable transcriptional regulator SLK1; AtSLK1; Protein SEUSS-like 1", "protein_names_refseq": "SEUSS-like 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G25520)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "10617198;20007451;23328941;24564815;25561503;27862469;28154133", "class_list": "", "function": "Probable transcription regulator that functions in the development of the carpel margin meristem similarly to SEUSS (SEU). In association with SEU, supports organ development from meristematic regions by facilitating auxin response and thus organ initiation, and by sustaining meristematic potential through the maintenance of PHABULOSA expression (PubMed:20007451). DNA-binding adapter subunit of the SEU-SLK1 transcriptional corepressor of abiotic stress (e.g. salt and osmotic stress) response genes (PubMed:24564815)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 2, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 2, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 2, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 1, "reported_phosphosites": 6, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 0, "biomarker_type": "", "glycan_count": 1, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "O65609;Q9M0K8", "ec_number_list": [], "go_molecular_function": "GO:0003712 transcription coregulator activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005667 transcription regulator complex", "go_biological_process": "GO:0000122 negative regulation of transcription by RNA polymerase II;GO:0006351 DNA-templated transcription;GO:0030154 cell differentiation;GO:0045944 positive regulation of transcription by RNA polymerase II;GO:0047484 regulation of response to osmotic stress", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "Q0WVM7-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0100000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q0WVX5-1", "uniprot_id": [ { "id": "SSY4_ARATH", "url": "https://www.uniprot.org/uniprot/Q0WVX5", "type": "external" } ], "mass": 117747.0, "length": 1040, "protein_name": "Probable starch synthase 4, chloroplastic/amyloplastic", "gene_name": "SS4", "organism": "Arabidopsis", "refseq_name": "starch synthase 4", "refseq_ac": [ { "id": "NP_193558", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_193558", "type": "external" } ], "gene_names_uniprotkb": "SS4; T9A21.90", "gene_names_refseq": "ARABIDOPSIS THALIANA STARCH SYNTHASE 4; ATSS4; SS4; SSIV; STARCH SYNTHASE 4; T9A21.90; T9A21_90; starch synthase 4", "protein_names_uniprotkb": "Probable starch synthase 4, chloroplastic/amyloplastic; 2.4.1.21; AtSS4; SSIV; Soluble starch synthase IV", "protein_names_refseq": "starch synthase 4", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G18240)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "10617198;17217470;19666739;21645200;27862469;28684429;29866647;30055112;30123236", "class_list": "glycogene;glycosyltransferase", "function": "Probably involved in the priming of starch granule formation. May play a regulatory role in the control of starch accumulation in plastids. Is necessary and sufficient to establish the correct number of starch granules observed in chloroplasts., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O49727", "ec_number_list": [ { "id": "2.4.1.21", "url": "https://www.rhea-db.org/rhea/?query=ec:2.4.1.21", "type": "external" } ], "go_molecular_function": "GO:0004373 alpha-1,4-glucan glucosyltransferase (UDP-glucose donor) activity;GO:0009011 alpha-1,4-glucan glucosyltransferase (ADP-glucose donor) activity", "go_cellular_component": "GO:0009501 amyloplast;GO:0009507 chloroplast;GO:0009570 chloroplast stroma", "go_biological_process": "GO:0005982 starch metabolic process;GO:0019252 starch biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "Q0WVX5-1", "record_type": "protein", "filter_code": "0000000.0000101.010000.100000000000000000.0000000000000.000.11000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q0WW17-1", "uniprot_id": [ { "id": "RWA2_ARATH", "url": "https://www.uniprot.org/uniprot/Q0WW17", "type": "external" } ], "mass": 63612.0, "length": 545, "protein_name": "Protein REDUCED WALL ACETYLATION 2", "gene_name": "RWA2", "organism": "Arabidopsis", "refseq_name": "O-acetyltransferase family protein", "refseq_ac": [ { "id": "NP_001078116", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001078116", "type": "external" } ], "gene_names_uniprotkb": "RWA2; F5E6.12", "gene_names_refseq": "F5E6.12; F5E6_12; REDUCED WALL ACETYLATION 2; RWA2", "protein_names_uniprotkb": "Protein REDUCED WALL ACETYLATION 2; 2.3.1.-", "protein_names_refseq": "O-acetyltransferase family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G06550)", "pathway_count": 1, "publication_count": 20, "publication_id_list": "11130713;18463617;19376835;19688752;20733066;21212300;21673009;21768351;23111157;23328941;23572148;23660473;23776212;24019426;25561503;26091701;26187819;27862469;28011693;30833711", "class_list": "", "function": "Probable O-acetyltransferase involved in the acetylation of cell wall polymers (both pectic and nonpectic polysaccharides) and of xylan during secondary wall biosynthesis. Catalyzes the O-acetylation of xyloglucan., [UniProtKB, PubMed, PubMed, PubMed]; Seems required for infection by the necrotrophic fungal pathogen Botrytis cinerea., [UniProtKB, PubMed]", "predicted_glycosites": 3, "predicted_n_glycosites": 2, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 3, "binding_glycan_count": 0, "secondary_ac_list": "B3H643;Q67YS5;Q9C8Z6", "ec_number_list": [], "go_molecular_function": "GO:0016491 oxidoreductase activity;GO:0016407 acetyltransferase activity", "go_cellular_component": "GO:0000139 Golgi membrane;GO:0005783 endoplasmic reticulum;GO:0005794 Golgi apparatus;GO:0005789 endoplasmic reticulum membrane;GO:0000138 Golgi trans cisterna", "go_biological_process": "GO:0050832 defense response to fungus;GO:0005976 polysaccharide metabolic process;GO:0009834 plant-type secondary cell wall biogenesis;GO:0010411 xyloglucan metabolic process;GO:0045491 xylan metabolic process", "synthesized_glycan_count": 0, "hit_score": 2.1, "record_id": "Q0WW17-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000011001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1EBV7-1", "uniprot_id": [ { "id": "BASS2_ARATH", "url": "https://www.uniprot.org/uniprot/Q1EBV7", "type": "external" } ], "mass": 43608.0, "length": 409, "protein_name": "Sodium/pyruvate cotransporter BASS2, chloroplastic", "gene_name": "BASS2", "organism": "Arabidopsis", "refseq_name": "Sodium Bile acid symporter family", "refseq_ac": [ { "id": "NP_850089", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_850089", "type": "external" } ], "gene_names_uniprotkb": "BASS2; BAT1; F12C20.6; SBF1", "gene_names_refseq": "BASS2; F12C20.6; F12C20_6; bile acid:sodium symporter family protein 2", "protein_names_uniprotkb": "Sodium/pyruvate cotransporter BASS2, chloroplastic; Bile acid transporter 1; Bile acid-sodium symporter family protein 2", "protein_names_refseq": "Sodium Bile acid symporter family", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G26900)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "10617197;12177140;12766230;14593172;19542295;21866161;22223895;27862469", "class_list": "", "function": "Sodium-coupled metabolite transporter that plays a crucial role in pyruvate transport across the chloroplast envelope. Is required for sodium-coupled pyruvate import into plastids., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O81017;Q84WD8;Q8S2V7", "ec_number_list": [], "go_molecular_function": "GO:0050833 pyruvate transmembrane transporter activity", "go_cellular_component": "GO:0016020 membrane;GO:0009507 chloroplast;GO:0009534 chloroplast thylakoid;GO:0009941 chloroplast envelope", "go_biological_process": "GO:0006849 plasma membrane pyruvate transport", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "Q1EBV7-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1EC69-1", "uniprot_id": [ { "id": "SMO12_ARATH", "url": "https://www.uniprot.org/uniprot/Q1EC69", "type": "external" } ], "mass": 34989.0, "length": 299, "protein_name": "Methylsterol monooxygenase 1-2", "gene_name": "SMO1-2", "organism": "Arabidopsis", "refseq_name": "sterol C4-methyl oxidase 1-2", "refseq_ac": [ { "id": "NP_567670", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_567670", "type": "external" } ], "gene_names_uniprotkb": "SMO1-2; T12H17", "gene_names_refseq": "ATSMO1-2; ATSMO1; SMO1-2; SMO1; STEROL 4-ALPHA-METHYL-OXIDASE 1; STEROL C4-METHYL OXIDASE 1; sterol C4-methyl oxidase 1-2", "protein_names_uniprotkb": "Methylsterol monooxygenase 1-2; 1.14.18.10; 1.14.18.9; AtSMO1-2; Sterol 4-alpha-methyl-oxidase 1-2", "protein_names_refseq": "sterol C4-methyl oxidase 1-2", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G22756)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "10617198;14653780;27862469;29288621;31341004", "class_list": "", "function": "Non-heme iron oxygenase involved in sterols biosynthesis by catalyzing the removal of the first methyl group at the C-4 position (By similarity). 4,4-dimethyl-9-beta,19-cyclopropylsterols such as 24-methylenecycloartanol are the preferred substrates (By similarity). Acts as a rate-limiting enzyme in the sterol pathway via interaction with ACBP1; sterols serve as lipid modulators for gene expression of homeodomain-leucine zipper IV transcription factors (PubMed:29288621). Together with SMO1-1, involved in the maintenance of sterol composition to balance auxin and cytokinin activities during embryogenesis (PubMed:31341004)., [UniProtKB, PubMed, UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q8GT72;Q8LAD9", "ec_number_list": [ { "id": "1.14.18.9", "url": "https://www.rhea-db.org/rhea/?query=ec:1.14.18.9", "type": "external" }, { "id": "1.14.18.11", "url": "https://www.rhea-db.org/rhea/?query=ec:1.14.18.11", "type": "external" }, { "id": "1.14.18.10", "url": "https://www.rhea-db.org/rhea/?query=ec:1.14.18.10", "type": "external" } ], "go_molecular_function": "GO:0000254 C-4 methylsterol oxidase activity;GO:0005506 iron ion binding", "go_cellular_component": "GO:0005783 endoplasmic reticulum;GO:0005789 endoplasmic reticulum membrane", "go_biological_process": "GO:0016126 sterol biosynthetic process;GO:0055089 fatty acid homeostasis;GO:0055092 sterol homeostasis;GO:0080064 4,4-dimethyl-9beta,19-cyclopropylsterol oxidation", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q1EC69-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1ECF1-1", "uniprot_id": [ { "id": "PYL7_ARATH", "url": "https://www.uniprot.org/uniprot/Q1ECF1", "type": "external" } ], "mass": 23676.0, "length": 211, "protein_name": "Abscisic acid receptor PYL7", "gene_name": "PYL7", "organism": "Arabidopsis", "refseq_name": "PYR1-like 7", "refseq_ac": [ { "id": "NP_567208", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_567208", "type": "external" } ], "gene_names_uniprotkb": "PYL7; ABIP7; F3I3; RCAR2", "gene_names_refseq": "PYL7; PYR1-like 7; RCAR2; regulatory components of ABA receptor 2", "protein_names_uniprotkb": "Abscisic acid receptor PYL7; ABI1-binding protein 7; PYR1-like protein 7; Regulatory components of ABA receptor 2", "protein_names_refseq": "PYR1-like 7", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G01026)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "10617198;19407142;19407143;19874541;23844015;27862469", "class_list": "", "function": "Receptor for abscisic acid (ABA) required for ABA-mediated responses such as stomatal closure and germination inhibition. Inhibits the activity of group-A protein phosphatases type 2C (PP2Cs) when activated by ABA., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q8LAZ6;Q9SV27", "ec_number_list": [], "go_molecular_function": "GO:0042803 protein homodimerization activity;GO:0004864 protein phosphatase inhibitor activity;GO:0038023 signaling receptor activity;GO:0010427 abscisic acid binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005886 plasma membrane", "go_biological_process": "GO:0009738 abscisic acid-activated signaling pathway", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q1ECF1-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1ENB6-1", "uniprot_id": [ { "id": "FOLC_ARATH", "url": "https://www.uniprot.org/uniprot/Q1ENB6", "type": "external" } ], "mass": 54110.0, "length": 484, "protein_name": "Folate synthesis bifunctional protein", "gene_name": "DHPS", "organism": "Arabidopsis", "refseq_name": "Dihydropterin pyrophosphokinase / Dihydropteroate synthase", "refseq_ac": [ { "id": "NP_001319354", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001319354", "type": "external" } ], "gene_names_uniprotkb": "DHPS; F23O10.22; F4N2.15", "gene_names_refseq": "F4N2.15", "protein_names_uniprotkb": "Folate synthesis bifunctional protein; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase; 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase; PPPK", "protein_names_refseq": "Dihydropterin pyrophosphokinase / Dihydropteroate synthase", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G69190)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "11130712;17289662;21996493;25561503;27862469", "class_list": "", "function": "Catalyzes the first two consecutive steps of tetrahydrofolate biosynthesis (PubMed:17289662). Plays a role in seed stress response and survival (PubMed:17289662, PubMed:21996493)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9LE77", "ec_number_list": [ { "id": "2.5.1.15", "url": "https://www.rhea-db.org/rhea/?query=ec:2.5.1.15", "type": "external" }, { "id": "2.7.6.3", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.6.3", "type": "external" } ], "go_molecular_function": "GO:0005524 ATP binding;GO:0046872 metal ion binding;GO:0016301 kinase activity;GO:0003848 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity;GO:0004156 dihydropteroate synthase activity", "go_cellular_component": "GO:0005829 cytosol;GO:0009507 chloroplast", "go_biological_process": "GO:0046654 tetrahydrofolate biosynthetic process;GO:0006979 response to oxidative stress;GO:0046656 folic acid biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q1ENB6-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1G3I2-1", "uniprot_id": [ { "id": "MIP1A_ARATH", "url": "https://www.uniprot.org/uniprot/Q1G3I2", "type": "external" } ], "mass": 13562.0, "length": 117, "protein_name": "B-box domain protein 30", "gene_name": "MIP1A", "organism": "Arabidopsis", "refseq_name": "B-box type zinc finger family protein", "refseq_ac": [ { "id": "NP_001031645", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001031645", "type": "external" } ], "gene_names_uniprotkb": "MIP1A; BBX30", "gene_names_refseq": "B-box domain protein 30; BBX30", "protein_names_uniprotkb": "B-box domain protein 30; AtBBX30; Microprotein 1A", "protein_names_refseq": "B-box type zinc finger family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G15248)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "10617198;17147637;19920209;27015278;27862469", "class_list": "", "function": "Developmental regulator acting by forming heterodimeric complexes, that sequester CO and CO-like (COL) proteins into non-functional complexes. Engages CO and the transcriptional repressor TPL in a tripartite complex. Involved in the CO-mediated long-day flowering-promotion pathway., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 8, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0008270 zinc ion binding;GO:0030674 protein-macromolecule adaptor activity", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0007623 circadian rhythm;GO:0009909 regulation of flower development", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q1G3I2-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1G3U6-1", "uniprot_id": [ { "id": "PCO3_ARATH", "url": "https://www.uniprot.org/uniprot/Q1G3U6", "type": "external" } ], "mass": 31291.0, "length": 282, "protein_name": "Plant cysteine oxidase 3", "gene_name": "PCO3", "organism": "Arabidopsis", "refseq_name": "2-aminoethanethiol dioxygenase, putative (DUF1637)", "refseq_ac": [ { "id": "NP_564055", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_564055", "type": "external" } ], "gene_names_uniprotkb": "PCO3; CpNIFS2; F15H18.26", "gene_names_refseq": "F15H18.26; F15H18_26; PCO3; plant cysteine oxidase 3", "protein_names_uniprotkb": "Plant cysteine oxidase 3; 1.13.11.20; AtPCO3; NIFS-like protein 2; NifS2", "protein_names_refseq": "2-aminoethanethiol dioxygenase, putative (DUF1637)", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G18490)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "11130712;14593172;17147637;18978034;24599061;27862469;29848548", "class_list": "", "function": "Catalyzes the oxidation of N-terminal cysteine residues (N-Cys), thus preparing the protein for N-end rule pathway-mediated proteasomal degradation, upstream of the N-end rule enzymes ATE1, ATE2 and PRT6 (Probable) (PubMed:29848548). Controls the preparation of the group VII ethylene response factor (ERF-VII) proteins for degradation via the 26S proteasome N-end rule pathway (Probable) (PubMed:29848548). Acts as an oxygen sensor that controls the stability of ERF-VII proteins, which are stabilized in flooding-induced hypoxia, and regulate transcriptional adaptation to these adverse conditions (Probable) (PubMed:29848548)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q8L8X2;Q940G4", "ec_number_list": [ { "id": "1.13.11.20", "url": "https://www.rhea-db.org/rhea/?query=ec:1.13.11.20", "type": "external" } ], "go_molecular_function": "GO:0005506 iron ion binding;GO:0017172 cysteine dioxygenase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm", "go_biological_process": "GO:0018171 peptidyl-cysteine oxidation;GO:0071456 cellular response to hypoxia;GO:0070483 detection of hypoxia", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q1G3U6-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1H537-1", "uniprot_id": [ { "id": "DCVR_ARATH", "url": "https://www.uniprot.org/uniprot/Q1H537", "type": "external" } ], "mass": 45893.0, "length": 417, "protein_name": "Divinyl chlorophyllide a 8-vinyl-reductase, chloroplastic", "gene_name": "DVR", "organism": "Arabidopsis", "refseq_name": "NAD(P)-binding Rossmann-fold superfamily protein", "refseq_ac": [ { "id": "NP_197367", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_197367", "type": "external" } ], "gene_names_uniprotkb": "DVR; PCB2; T1A4.40", "gene_names_refseq": "DIVINYL PROTOCHLOROPHYLLIDE 8-VINYL REDUCTASE; PALE-GREEN AND CHLOROPHYLL B REDUCED 2; PCB2; T1A4.40; T1A4_40", "protein_names_uniprotkb": "Divinyl chlorophyllide a 8-vinyl-reductase, chloroplastic; 1.3.1.75; Protein PALE-GREEN AND CHLOROPHYLL B REDUCED 2", "protein_names_refseq": "NAD(P)-binding Rossmann-fold superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G18660)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "11130714;11910074;15632054;15695432;17991629;18463617;20466843;23154534;27862469", "class_list": "", "function": "Catalyzes the conversion of divinyl chlorophyllide to monovinyl chlorophyllide. Reduces the 8-vinyl group of the tetrapyrrole to an ethyl group using NADPH as the reductant. The best substrate is (3,8-divinyl)-chlorophyllide a (DV-Chlidea). Very low activity with (3,8-divinyl)-protochlorophyllide a (DV-Pchlidea) and (3,8-divinyl)-magnesium-protoporphyrin IX monomethyl ester (DV-MPE). No activity with (3,8-divinyl)-chlorophyllide b (DV-Chlideb), (3,8-divinyl)-magnesium-protoporphyrin IX (DV-Mg-Proto) and either (3,8-divinyl)-chlorophyll a (DV-Chla) or b (DV-Chlb)., [UniProtKB, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 4, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q8GZ86;Q8LE07", "ec_number_list": [ { "id": "1.3.1.75", "url": "https://www.rhea-db.org/rhea/?query=ec:1.3.1.75", "type": "external" } ], "go_molecular_function": "GO:0033728 3,8-divinyl protochlorophyllide a 8-vinyl-reductase (NADPH) activity", "go_cellular_component": "GO:0005739 mitochondrion;GO:0009507 chloroplast;GO:0009534 chloroplast thylakoid;GO:0009536 plastid;GO:0009941 chloroplast envelope", "go_biological_process": "GO:0015995 chlorophyll biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "Q1H537-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1H595-1", "uniprot_id": [ { "id": "LSM2_ARATH", "url": "https://www.uniprot.org/uniprot/Q1H595", "type": "external" } ], "mass": 10694.0, "length": 93, "protein_name": "Sm-like protein LSM2", "gene_name": "LSM2", "organism": "Arabidopsis", "refseq_name": "Small nuclear ribonucleoprotein family protein", "refseq_ac": [ { "id": "NP_563682", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_563682", "type": "external" } ], "gene_names_uniprotkb": "LSM2; F15K9.7", "gene_names_refseq": "F15K9.7; F15K9_7; LSM2; SM-like 2", "protein_names_uniprotkb": "Sm-like protein LSM2; AtLSM2; U6 snRNA-associated Sm-like protein LSM2", "protein_names_refseq": "Small nuclear ribonucleoprotein family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G03330)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "11130712;23221597;23620288;27862469", "class_list": "", "function": "Component of LSM protein complexes, which are involved in RNA processing. Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation by promoting decapping and leading to accurate 5'-3' mRNA decay. The cytoplasmic LSM1-LSM7 complex regulates developmental gene expression by the decapping of specific development-related transcripts. Component of the nuclear LSM2-LSM8 complex which is involved splicing nuclear mRNAs. LSM2-LSM8 binds directly to the U6 small nuclear RNAs (snRNAs) and is essential for accurate splicing of selected development-related mRNAs through the stabilization of the spliceosomal U6 snRNA. Plays a critical role in the regulation of development-related gene expression., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q8L5U6;Q9ZVT4", "ec_number_list": [], "go_molecular_function": "GO:0003723 RNA binding", "go_cellular_component": "GO:0005634 nucleus;GO:0000932 P-body;GO:0071013 catalytic step 2 spliceosome;GO:0071011 precatalytic spliceosome;GO:0046540 U4/U6 x U5 tri-snRNP complex", "go_biological_process": "GO:0000290 deadenylation-dependent decapping of nuclear-transcribed mRNA;GO:0000398 mRNA splicing, via spliceosome", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "Q1H595-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1PDP9-1", "uniprot_id": [ { "id": "MY115_ARATH", "url": "https://www.uniprot.org/uniprot/Q1PDP9", "type": "external" } ], "mass": 41600.0, "length": 359, "protein_name": "Transcription factor MYB115", "gene_name": "MYB115", "organism": "Arabidopsis", "refseq_name": "myb domain protein 115", "refseq_ac": [ { "id": "NP_568581", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_568581", "type": "external" } ], "gene_names_uniprotkb": "MYB115; MPO12.8", "gene_names_refseq": "AtMYB115; MPO12.8; MPO12_8; MYB115; myb domain protein 115", "protein_names_uniprotkb": "Transcription factor MYB115; AtMYB115; Myb-related protein 115", "protein_names_refseq": "myb domain protein 115", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G40360)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "11597504;16463103;17147637;18695688;27681170;27862469;9405937", "class_list": "", "function": "Transcription activator that recognizes the motif 5'-TAACGG-3' in the promoter of target genes (PubMed:27681170). Promotes vegetative-to-embryonic transition and the formation of somatic embryos from root explants in a WUS-independent manner (PubMed:18695688). Together with MYB118, activates the transcription of S-ACP-DES2/AAD2 and S-ACP-DES3/AAD3 thus promoting the biosynthesis of omega-7 monounsaturated fatty acid in seed endosperm (PubMed:27681170)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0MFK5;Q6R048;Q9C5Q0;Q9FNE3", "ec_number_list": [], "go_molecular_function": "GO:0003677 DNA binding;GO:0003700 DNA-binding transcription factor activity;GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding;GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific;GO:0043565 sequence-specific DNA binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006355 regulation of DNA-templated transcription;GO:0045893 positive regulation of DNA-templated transcription;GO:0055089 fatty acid homeostasis;GO:0045723 positive regulation of fatty acid biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q1PDP9-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1PDV6-1", "uniprot_id": [ { "id": "PBL27_ARATH", "url": "https://www.uniprot.org/uniprot/Q1PDV6", "type": "external" } ], "mass": 55931.0, "length": 513, "protein_name": "Serine/threonine-protein kinase PBL27", "gene_name": "PBL27", "organism": "Arabidopsis", "refseq_name": "Protein kinase superfamily protein", "refseq_ac": [ { "id": "NP_001190331", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001190331", "type": "external" } ], "gene_names_uniprotkb": "PBL27; T28N17.90", "gene_names_refseq": "PBL27; T28N17.90; T28N17_90", "protein_names_uniprotkb": "Serine/threonine-protein kinase PBL27; 2.7.11.1; PBS1-like protein 27; Receptor-like cytoplasmic kinase PBL27", "protein_names_refseq": "Protein kinase superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G18610)", "pathway_count": 1, "publication_count": 16, "publication_id_list": "11130714;14506206;15308754;17147637;17317660;17651370;19245862;20413097;23111157;24750441;25561503;27679653;27862469;28011693;29654922;30833711", "class_list": "", "function": "Receptor-like cytoplasmic kinase involved in the transduction of signal between the host cell surface chitin receptor complex CERK1-LYK5 and the intracellular MAPKKK5-dependent mitogen-activated protein kinase (MAPK) cascade that leads to chitin-induced immunity (PubMed:24750441, PubMed:27679653). Phosphorylates and activates MAPKKK5 when phosphorylated by CERK1 after elicitation by chitin (PubMed:27679653)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 15, "reported_mutagensis": 4, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0MFG6", "ec_number_list": [ { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.3.2.27", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.2.27", "type": "external" }, { "id": "2.7.10.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.-", "type": "external" }, { "id": "3.1.4.46", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.4.46", "type": "external" }, { "id": "2.7.11.25", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.25", "type": "external" }, { "id": "2.7.11.22", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.22", "type": "external" }, { "id": "2.7.10.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.1", "type": "external" }, { "id": "2.7.11.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.-", "type": "external" }, { "id": "2.7.11.24", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.24", "type": "external" }, { "id": "2.7.12.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.1", "type": "external" }, { "id": "2.7.11.23", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.23", "type": "external" }, { "id": "2.7.12.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.2", "type": "external" }, { "id": "2.7.-.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.-.-", "type": "external" }, { "id": "3.1.26.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.26.-", "type": "external" }, { "id": "3.1.3.16", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.16", "type": "external" }, { "id": "2.7.11.34", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.34", "type": "external" }, { "id": "4.6.1.2", "url": "https://www.rhea-db.org/rhea/?query=ec:4.6.1.2", "type": "external" } ], "go_molecular_function": "GO:0004672 protein kinase activity;GO:0004674 protein serine/threonine kinase activity;GO:0005524 ATP binding;GO:0106310 protein serine kinase activity", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "GO:0043410 positive regulation of MAPK cascade;GO:0045087 innate immune response;GO:0050832 defense response to fungus;GO:1900426 positive regulation of defense response to bacterium;GO:0045088 regulation of innate immune response", "synthesized_glycan_count": 0, "hit_score": 1.7, "record_id": "Q1PDV6-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1PDW3-1", "uniprot_id": [ { "id": "LIPG1_ARATH", "url": "https://www.uniprot.org/uniprot/Q1PDW3", "type": "external" } ], "mass": 71552.0, "length": 636, "protein_name": "Receptor-like kinase LIP1", "gene_name": "LIP1", "organism": "Arabidopsis", "refseq_name": "Protein kinase superfamily protein", "refseq_ac": [ { "id": "NP_197154", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_197154", "type": "external" } ], "gene_names_uniprotkb": "LIP1; MQK4.24", "gene_names_refseq": "LIP1; LOST IN POLLEN TUBE GUIDANCE 1; MQK4.24; MQK4_24", "protein_names_uniprotkb": "Receptor-like kinase LIP1; 2.7.11.-; AtLIP1; Protein LOST IN POLLEN TUBE GUIDANCE 1", "protein_names_refseq": "Protein kinase superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G16500)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "17147637;22631563;23684977;26961657;27862469;9330910", "class_list": "", "function": "Involved in pollen tube guidance into micropyle. Participates in perception of the ovule-secreted peptide signal LURE1., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 5, "reported_mutagensis": 2, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9FFD4", "ec_number_list": [], "go_molecular_function": "GO:0004672 protein kinase activity;GO:0004674 protein serine/threonine kinase activity;GO:0005524 ATP binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005886 plasma membrane;GO:0090404 pollen tube tip", "go_biological_process": "GO:0010183 pollen tube guidance", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q1PDW3-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1PFB9-1", "uniprot_id": [ { "id": "AGC17_ARATH", "url": "https://www.uniprot.org/uniprot/Q1PFB9", "type": "external" } ], "mass": 61069.0, "length": 555, "protein_name": "Serine/threonine-protein kinase AGC1-7", "gene_name": "AGC1-7", "organism": "Arabidopsis", "refseq_name": "AGC kinase 1.7", "refseq_ac": [ { "id": "NP_001185434", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001185434", "type": "external" } ], "gene_names_uniprotkb": "AGC1-7; AGC1.7; YUP8H12R.15", "gene_names_refseq": "AGC kinase 1.7; AGC1.7; YUP8H12R.15; YUP8H12R_15", "protein_names_uniprotkb": "Serine/threonine-protein kinase AGC1-7; 2.7.11.1; AGC serine/threonine-protein kinase subfamily 1 member 7", "protein_names_refseq": "AGC kinase 1.7", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G79250)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "11130712;13678909;16973627;17147637;19144004;27862469", "class_list": "", "function": "Functions redundantly with AGC1-5 as signaling component in the pollen tube. Required for polarized growth of pollen tubes., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O64528", "ec_number_list": [ { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.3.2.27", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.2.27", "type": "external" }, { "id": "2.7.10.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.-", "type": "external" }, { "id": "3.1.4.46", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.4.46", "type": "external" }, { "id": "2.7.11.25", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.25", "type": "external" }, { "id": "2.7.11.22", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.22", "type": "external" }, { "id": "2.7.10.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.1", "type": "external" }, { "id": "2.7.11.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.-", "type": "external" }, { "id": "2.7.11.24", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.24", "type": "external" }, { "id": "2.7.12.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.1", "type": "external" }, { "id": "2.7.11.23", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.23", "type": "external" }, { "id": "2.7.12.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.2", "type": "external" }, { "id": "2.7.-.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.-.-", "type": "external" }, { "id": "3.1.26.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.26.-", "type": "external" }, { "id": "3.1.3.16", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.16", "type": "external" }, { "id": "2.7.11.34", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.34", "type": "external" }, { "id": "4.6.1.2", "url": "https://www.rhea-db.org/rhea/?query=ec:4.6.1.2", "type": "external" } ], "go_molecular_function": "GO:0004674 protein serine/threonine kinase activity;GO:0005524 ATP binding;GO:0016301 kinase activity;GO:0106310 protein serine kinase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005886 plasma membrane", "go_biological_process": "GO:0009826 unidimensional cell growth;GO:0009860 pollen tube growth", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q1PFB9-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1PFC2-1", "uniprot_id": [ { "id": "AGL66_ARATH", "url": "https://www.uniprot.org/uniprot/Q1PFC2", "type": "external" } ], "mass": 38051.0, "length": 332, "protein_name": "Agamous-like MADS-box protein AGL66", "gene_name": "AGL66", "organism": "Arabidopsis", "refseq_name": "AGAMOUS-like 66", "refseq_ac": [ { "id": "NP_177921", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_177921", "type": "external" } ], "gene_names_uniprotkb": "AGL66", "gene_names_refseq": "AGAMOUS-like 66; AGL66; F28K19.20; F28K19_20", "protein_names_uniprotkb": "Agamous-like MADS-box protein AGL66", "protein_names_refseq": "AGAMOUS-like 66", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G77980)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "11130712;12837945;12949148;17147637;19211705;27862469", "class_list": "", "function": "Probable transcription factor that forms a heterodimer with the MADS-box protein AGL30 and is involved in the regulation of pollen maturation at the late stages of pollen development and pollen tube growth., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0MEH0;Q76K85;Q7X9H4", "ec_number_list": [], "go_molecular_function": "GO:0003700 DNA-binding transcription factor activity;GO:0046983 protein dimerization activity;GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding;GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006357 regulation of transcription by RNA polymerase II;GO:0045944 positive regulation of transcription by RNA polymerase II;GO:0006355 regulation of DNA-templated transcription;GO:0009555 pollen development", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q1PFC2-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1PFH8-1", "uniprot_id": [ { "id": "CDPKJ_ARATH", "url": "https://www.uniprot.org/uniprot/Q1PFH8", "type": "external" } ], "mass": 62948.0, "length": 551, "protein_name": "Calcium-dependent protein kinase 19", "gene_name": "CPK19", "organism": "Arabidopsis", "refseq_name": "calcium-dependent protein kinase 19", "refseq_ac": [ { "id": "NP_176386", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_176386", "type": "external" } ], "gene_names_uniprotkb": "CPK19; F8K4.14", "gene_names_refseq": "CPK19; F8K4.14; F8K4_14; calcium-dependent protein kinase 19", "protein_names_uniprotkb": "Calcium-dependent protein kinase 19; 2.7.11.1", "protein_names_refseq": "calcium-dependent protein kinase 19", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G61950)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "11130712;12068094;12805596;17147637;20466843;23660473;27862469", "class_list": "", "function": "May play a role in signal transduction pathways that involve calcium as a second messenger., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 3, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O80700", "ec_number_list": [ { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.3.2.27", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.2.27", "type": "external" }, { "id": "2.7.10.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.-", "type": "external" }, { "id": "3.1.4.46", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.4.46", "type": "external" }, { "id": "2.7.11.25", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.25", "type": "external" }, { "id": "2.7.11.22", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.22", "type": "external" }, { "id": "2.7.10.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.1", "type": "external" }, { "id": "2.7.11.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.-", "type": "external" }, { "id": "2.7.11.24", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.24", "type": "external" }, { "id": "2.7.12.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.1", "type": "external" }, { "id": "2.7.11.23", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.23", "type": "external" }, { "id": "2.7.12.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.2", "type": "external" }, { "id": "2.7.-.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.-.-", "type": "external" }, { "id": "3.1.26.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.26.-", "type": "external" }, { "id": "3.1.3.16", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.16", "type": "external" }, { "id": "2.7.11.34", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.34", "type": "external" }, { "id": "4.6.1.2", "url": "https://www.rhea-db.org/rhea/?query=ec:4.6.1.2", "type": "external" } ], "go_molecular_function": "GO:0009931 calcium-dependent protein serine/threonine kinase activity;GO:0005516 calmodulin binding;GO:0005524 ATP binding;GO:0005509 calcium ion binding;GO:0004683 calcium/calmodulin-dependent protein kinase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005886 plasma membrane", "go_biological_process": "GO:0035556 intracellular signal transduction", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q1PFH8-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1PFR7-1", "uniprot_id": [ { "id": "LEC2_ARATH", "url": "https://www.uniprot.org/uniprot/Q1PFR7", "type": "external" } ], "mass": 41708.0, "length": 363, "protein_name": "B3 domain-containing transcription factor LEC2", "gene_name": "LEC2", "organism": "Arabidopsis", "refseq_name": "AP2/B3-like transcriptional factor family protein", "refseq_ac": [ { "id": "NP_564304", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_564304", "type": "external" } ], "gene_names_uniprotkb": "LEC2; F3H9.5", "gene_names_refseq": "AtLEC2; F3H9.5; F3H9_5; LEAFY COTYLEDON 2; LEC2", "protein_names_uniprotkb": "B3 domain-containing transcription factor LEC2; Protein LEAFY COTYLEDON 2", "protein_names_refseq": "AP2/B3-like transcriptional factor family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G28300)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "11130712;11573014;12244265;15208423;16492731;17147637;18287041;18986826;27862469", "class_list": "", "function": "Transcription regulator that plays a central role in embryo development. Required for the maintenance of suspensor morphology, specification of cotyledon identity, progression through the maturation phase and suppression of premature germination. Ectopic expression is sufficient to promote somatic embryogenesis., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0ME96;Q93VR5;Q9FZA3", "ec_number_list": [], "go_molecular_function": "GO:0003677 DNA binding;GO:0003700 DNA-binding transcription factor activity", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0045893 positive regulation of DNA-templated transcription;GO:0009793 embryo development ending in seed dormancy;GO:0010262 somatic embryogenesis;GO:0010431 seed maturation", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "Q1PFR7-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q24JK1-1", "uniprot_id": [ { "id": "MYB96_ARATH", "url": "https://www.uniprot.org/uniprot/Q24JK1", "type": "external" } ], "mass": 39188.0, "length": 352, "protein_name": "Transcription factor MYB96", "gene_name": "MYB96", "organism": "Arabidopsis", "refseq_name": "myb domain protein 96", "refseq_ac": [ { "id": "NP_201053", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_201053", "type": "external" } ], "gene_names_uniprotkb": "MYB96; K19B1.8; MYBCOV1", "gene_names_refseq": "ATMYB96; K19B1.8; K19B1_8; MYB DOMAIN PROTEIN 96; MYB96; MYBCOV1; myb domain protein 96", "protein_names_uniprotkb": "Transcription factor MYB96; AtMYB96; Myb-related protein 96", "protein_names_refseq": "myb domain protein 96", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G62470)", "pathway_count": 1, "publication_count": 14, "publication_id_list": "10226370;11597504;19625633;20149112;21398568;23404903;25616734;25869652;25912720;26725725;27577115;27862469;30979883;9872454", "class_list": "", "function": "Transcription activator involved in the activation of cuticular wax biosynthesis under drought stress. Binds directly to DNA consensus sequences found in the promoters of genes encoding very-long-chain fatty acid-condensing enzymes involved in cuticular wax biosynthesis (PubMed:21398568). Functions together with MYB94 in the activation of cuticular wax biosynthesis (PubMed:27577115). Involved in drought stress response through abscisic acid (ABA) signaling. Mediates ABA signals that enhance plant resistance to drought by reducing stomatal opening. Mediates ABA-auxin cross-talk to regulate lateral root growth under drought stress conditions (PubMed:19625633). Involved in the regulation of ABA biosynthesis and ABA-dependent seed dormancy state. Binds to the promoters of NCED2 and NCED6, which are enzymes catalyzing the first step of ABA biosynthesis (PubMed:25616734). Regulates seed germination by controlling the expression of ABI4, a repressor of lipid breakdown during seed germination (PubMed:25869652). Binds to the promoter of LTP3 and transactivates LTP3 gene in response to drought stress and freezing (PubMed:23404903). Involved in cold stress response. Binds directly to the promoters of heptahelical protein (HHP) genes in response to cold stress. HHPs modulate the expression of SCRM/ICE1, SCRM2/ICE2 and CAMTA3, which are upstream regulators of cold-responsive C-repeat-binding factors (CBFs) (PubMed:25912720). Involved in defense responses against the bacterial pathogen Pseudomonas syringae. May act as a molecular link that mediates cross-talks between ABA and salicylate (PubMed:20149112). Involved in a crosstalk between the circadian clock and ABA signaling. Binds directly to the promoter of APRR1/TOC1 to activate its expression (PubMed:26725725). Promotes ABA signaling (PubMed:30979883). Recruits the histone deacetylase HDA15 to the promoters of a subset of Rho GTPase (ROP) genes, which repress ABA signaling at the early stages of signal transduction (PubMed:30979883). HDA15 represses ROP expression by removing acetyl groups of histone H3 and H4 from the cognate regions, particularly in the presence of ABA (PubMed:30979883)., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q6R036;Q9SPG0;Q9ZRY6", "ec_number_list": [], "go_molecular_function": "GO:0003700 DNA-binding transcription factor activity;GO:0043565 sequence-specific DNA binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006952 defense response;GO:0009409 response to cold;GO:0006355 regulation of DNA-templated transcription;GO:0045893 positive regulation of DNA-templated transcription", "synthesized_glycan_count": 0, "hit_score": 1.5, "record_id": "Q24JK1-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q24JK4-1", "uniprot_id": [ { "id": "XRCC1_ARATH", "url": "https://www.uniprot.org/uniprot/Q24JK4", "type": "external" } ], "mass": 39838.0, "length": 353, "protein_name": "DNA-repair protein XRCC1", "gene_name": "XRCC1", "organism": "Arabidopsis", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "XRCC1; T21F11.25", "gene_names_refseq": "", "protein_names_uniprotkb": "DNA-repair protein XRCC1; AtXRCC1; Homolog of X-ray repair cross complementing 1", "protein_names_refseq": "", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G80420)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "11130712;11909950;23316050;27862469", "class_list": "", "function": "Corrects defective DNA strand-break repair and sister chromatid exchange following treatment with ionizing radiation and alkylating agents (By similarity). Involved in DNA demethylation pathway by stimulating cytosine methylation (5-meC) excision, gap tailoring, and DNA ligation., [UniProtKB, PubMed, UniProtKB]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "F4HS73;Q0WPZ1;Q9FT82;Q9M8L1", "ec_number_list": [], "go_molecular_function": "GO:0003684 damaged DNA binding;GO:0010385 double-stranded methylated DNA binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006284 base-excision repair;GO:0006303 double-strand break repair via nonhomologous end joining;GO:0000012 single strand break repair", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "Q24JK4-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000001001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q24JN5-1", "uniprot_id": [ { "id": "P4H5_ARATH", "url": "https://www.uniprot.org/uniprot/Q24JN5", "type": "external" } ], "mass": 32691.0, "length": 291, "protein_name": "Prolyl 4-hydroxylase 5", "gene_name": "P4H5", "organism": "Arabidopsis", "refseq_name": "2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein", "refseq_ac": [ { "id": "NP_179363", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_179363", "type": "external" } ], "gene_names_uniprotkb": "P4H5; T17A5.10", "gene_names_refseq": "P4H5; T17A5.10; T17A5_10; prolyl 4-hydroxylase 5", "protein_names_uniprotkb": "Prolyl 4-hydroxylase 5; 1.14.11.2; AtP4H5", "protein_names_refseq": "2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G17720)", "pathway_count": 1, "publication_count": 3, "publication_id_list": "10617197;21680836;27862469", "class_list": "", "function": "Catalyzes the post-translational formation of 4-hydroxyproline in -Xaa-Pro-Gly- sequences in proline-rich peptide sequences of plant glycoproteins and other proteins. Hydroxyprolines are important constituent of many plant cell wall glycoproteins such as extensins, hydroxyproline-rich glycoproteins, lectins and arabinogalactan proteins. Possesses high affinity for leucine-rich repeat and proline-rich extensins of root cell walls that are essential for root hair development. Hydroxyprolines define the subsequent O-glycosylation sites by arabinosyltransferases which elongate the O-arabinosides on extensins., [UniProtKB, PubMed]", "predicted_glycosites": 2, "predicted_n_glycosites": 2, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 2, "binding_glycan_count": 0, "secondary_ac_list": "Q8LB05", "ec_number_list": [ { "id": "1.14.11.2", "url": "https://www.rhea-db.org/rhea/?query=ec:1.14.11.2", "type": "external" } ], "go_molecular_function": "GO:0005506 iron ion binding;GO:0031418 L-ascorbic acid binding;GO:0004656 procollagen-proline 4-dioxygenase activity", "go_cellular_component": "GO:0000139 Golgi membrane;GO:0005739 mitochondrion;GO:0005783 endoplasmic reticulum;GO:0005789 endoplasmic reticulum membrane;GO:0000137 Golgi cis cisterna", "go_biological_process": "GO:0080147 root hair cell development", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "Q24JN5-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000010000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q27IK6-1", "uniprot_id": [ { "id": "KN12D_ARATH", "url": "https://www.uniprot.org/uniprot/Q27IK6", "type": "external" } ], "mass": 315062.0, "length": 2771, "protein_name": "Kinesin-like protein KIN-12D", "gene_name": "KIN12D", "organism": "Arabidopsis", "refseq_name": "phragmoplast orienting kinesin 2", "refseq_ac": [ { "id": "NP_188535", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_188535", "type": "external" } ], "gene_names_uniprotkb": "KIN12D; K13E13.17; POK2", "gene_names_refseq": "POK2; phragmoplast orienting kinesin 2", "protein_names_uniprotkb": "Kinesin-like protein KIN-12D; Phragmoplast orienting kinesin 2", "protein_names_refseq": "phragmoplast orienting kinesin 2", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G19050)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "10907853;11472632;16448571;16530461;16682350;19376835;22038119;23111157;27862469", "class_list": "", "function": "Involved in the spatial control of cytokinesis by a proper phragmoplast guidance., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 6, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9LJ60", "ec_number_list": [], "go_molecular_function": "GO:0005524 ATP binding;GO:0008017 microtubule binding;GO:0003777 microtubule motor activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005874 microtubule;GO:0032153 cell division site;GO:0009524 phragmoplast", "go_biological_process": "GO:0000281 mitotic cytokinesis;GO:0007018 microtubule-based movement;GO:0000911 cytokinesis by cell plate formation;GO:0080175 phragmoplast microtubule organization", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "Q27IK6-1", "record_type": "protein", "filter_code": "0000000.0000101.001000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q2HIK4-1", "uniprot_id": [ { "id": "PFD6_ARATH", "url": "https://www.uniprot.org/uniprot/Q2HIK4", "type": "external" } ], "mass": 14856.0, "length": 129, "protein_name": "Prefoldin subunit 6", "gene_name": "PFD6", "organism": "Arabidopsis", "refseq_name": "prefoldin 6", "refseq_ac": [ { "id": "NP_174292", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_174292", "type": "external" } ], "gene_names_uniprotkb": "PFD6; GIM1; T1P2.3", "gene_names_refseq": "PFD6; T1P2.3; T1P2_3; prefoldin 6", "protein_names_uniprotkb": "Prefoldin subunit 6; Gene involved in microtubule biogenesis 1", "protein_names_refseq": "prefoldin 6", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G29990)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "11130712;11910074;19004800;19825635;23583555;27862469;28412546;29463731;32396196", "class_list": "", "function": "Binds specifically to cytosolic chaperonin (c-CPN) and transfers target proteins to it (PubMed:19825635). Binds to nascent polypeptide chain and promotes folding in an environment in which there are many competing pathways for nonnative proteins (PubMed:19825635). Together with other chaperonins, contribute to the regulation of gene expression by modulating the spliceosome function on pre-mRNA splicing post-transcriptionally by acting as a co-chaperone of Hsp90 to control levels of LSM8 (PubMed:32396196). Required for the biogenesis of tubulins and for subsequent microtubules (MTs) organization and dynamicity, but unable to associate with microtubules (PubMed:19004800). Involved in the process leading to microtubules dissociation in response to gibberellic acid (GA) probably due to the DELLA proteins-mediated translocation of the prefoldin co-chaperone complex from the cytoplasm to the nucleus (PubMed:23583555). Contributes to the GA-dependent regulation of PIN2 trafficking at the plasma membrane, thus influencing auxin flux (PubMed:29463731)., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q8GYJ1;Q9C8S0", "ec_number_list": [], "go_molecular_function": "GO:0051082 unfolded protein binding;GO:0051087 protein-folding chaperone binding;GO:0051879 Hsp90 protein binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005886 plasma membrane;GO:0016272 prefoldin complex", "go_biological_process": "GO:0006397 mRNA processing;GO:0009409 response to cold;GO:0006457 protein folding;GO:0051131 chaperone-mediated protein complex assembly;GO:0043622 cortical microtubule organization", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "Q2HIK4-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q2MHE4-1", "uniprot_id": [ { "id": "HT1_ARATH", "url": "https://www.uniprot.org/uniprot/Q2MHE4", "type": "external" } ], "mass": 44281.0, "length": 390, "protein_name": "Serine/threonine/tyrosine-protein kinase HT1", "gene_name": "HT1", "organism": "Arabidopsis", "refseq_name": "Protein kinase superfamily protein", "refseq_ac": [ { "id": "NP_176430", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_176430", "type": "external" } ], "gene_names_uniprotkb": "HT1; F24O1.13; SUU", "gene_names_refseq": "F24O1.13; F24O1_13; HT1; high leaf temperature 1", "protein_names_uniprotkb": "Serine/threonine/tyrosine-protein kinase HT1; 2.7.10.1; 2.7.11.1; High leaf temperature protein 1", "protein_names_refseq": "Protein kinase superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G62400)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "11130712;16518390;25599916;26192339;27694184;27862469;27923039;29101334;30361234", "class_list": "", "function": "Serine/threonine/tyrosine kinase involved in the control of stomatal movement in response to CO(2) (PubMed:16518390, PubMed:27694184, PubMed:27923039, PubMed:29101334, PubMed:30361234). Functions as a major negative regulator of CO(2)-induced stomatal closing (PubMed:16518390). Does not seem to be involved in stomatal closure in response to abscisic acid (ABA) or light (PubMed:16518390). Involved in the control of red light-induced stomatal opening (PubMed:26192339). Is epistatic to SRK2E/OST1 function during stomatal responses to red light and altered CO(2) (PubMed:26192339). Phosphorylates SRK2E/OST1 and GHR1 to prevents SRK2E/OST1- and GHR1-induced activation of SLAC1, thus preventing stomatal closure (PubMed:25599916, PubMed:27694184, PubMed:30361234). Mediates the phosphorylation of CBC1 and CBC2 (PubMed:29101334)., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 5, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "F4HYS2;Q9MAV2", "ec_number_list": [ { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.3.2.27", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.2.27", "type": "external" }, { "id": "2.7.10.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.-", "type": "external" }, { "id": "3.1.4.46", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.4.46", "type": "external" }, { "id": "2.7.11.25", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.25", "type": "external" }, { "id": "2.7.10.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.2", "type": "external" }, { "id": "2.7.11.22", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.22", "type": "external" }, { "id": "2.7.10.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.1", "type": "external" }, { "id": "2.7.11.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.-", "type": "external" }, { "id": "2.7.11.24", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.24", "type": "external" }, { "id": "2.7.12.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.1", "type": "external" }, { "id": "2.7.11.23", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.23", "type": "external" }, { "id": "2.7.12.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.2", "type": "external" }, { "id": "2.7.-.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.-.-", "type": "external" }, { "id": "3.1.26.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.26.-", "type": "external" }, { "id": "3.1.3.16", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.16", "type": "external" }, { "id": "2.7.11.34", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.34", "type": "external" }, { "id": "4.6.1.2", "url": "https://www.rhea-db.org/rhea/?query=ec:4.6.1.2", "type": "external" } ], "go_molecular_function": "GO:0004672 protein kinase activity;GO:0004674 protein serine/threonine kinase activity;GO:0005524 ATP binding;GO:0004712 protein serine/threonine/tyrosine kinase activity;GO:0004714 transmembrane receptor protein tyrosine kinase activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005886 plasma membrane", "go_biological_process": "GO:0006468 protein phosphorylation;GO:0007165 signal transduction;GO:0046777 protein autophosphorylation;GO:0071244 cellular response to carbon dioxide;GO:0010119 regulation of stomatal movement", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "Q2MHE4-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q2PGG3-1", "uniprot_id": [ { "id": "SRR_ARATH", "url": "https://www.uniprot.org/uniprot/Q2PGG3", "type": "external" } ], "mass": 35068.0, "length": 331, "protein_name": "Serine racemase", "gene_name": "SR", "organism": "Arabidopsis", "refseq_name": "serine racemase", "refseq_ac": [ { "id": "NP_192901", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_192901", "type": "external" } ], "gene_names_uniprotkb": "SR; SR1; T5C23.70", "gene_names_refseq": "ATSR; SR; T5C23.70; T5C23_70; serine racemase", "protein_names_uniprotkb": "Serine racemase; 4.3.1.17; 4.3.1.18; 5.1.1.18; AtSR; D-serine ammonia-lyase; D-serine dehydratase; L-serine ammonia-lyase; L-serine dehydratase", "protein_names_refseq": "serine racemase", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G11640)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "10617198;16483618;21415319;27862469", "class_list": "", "function": "Pyridoxal-5'-phosphate (PLP)-dependent enzyme that catalyzes the synthesis of D-serine from L-serine. In addition to racemization, has dehydratase activity towards both L-serine and D-serine, a two-step reaction in which the hydroxyl group of serine is eliminated to produce aminoacrylate (2-aminoprop-2-enoate), and then the aminoacrylate (an unstable intermediate) is deaminated by nonenzymatic hydrolysis to produce pyruvate. L-alanine, L-arginine, and L-glutamine are poor substrates., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9T0D1", "ec_number_list": [ { "id": "4.3.1.18", "url": "https://www.rhea-db.org/rhea/?query=ec:4.3.1.18", "type": "external" }, { "id": "5.1.1.18", "url": "https://www.rhea-db.org/rhea/?query=ec:5.1.1.18", "type": "external" }, { "id": "4.3.1.17", "url": "https://www.rhea-db.org/rhea/?query=ec:4.3.1.17", "type": "external" } ], "go_molecular_function": "GO:0008721 D-serine ammonia-lyase activity;GO:0030378 serine racemase activity;GO:0000287 magnesium ion binding;GO:0005524 ATP binding;GO:0030170 pyridoxal phosphate binding", "go_cellular_component": "GO:0009507 chloroplast", "go_biological_process": "GO:0070179 D-serine biosynthetic process;GO:0070178 D-serine metabolic process;GO:0006563 L-serine metabolic process", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "Q2PGG3-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q2PS26-1", "uniprot_id": [ { "id": "ULP1D_ARATH", "url": "https://www.uniprot.org/uniprot/Q2PS26", "type": "external" } ], "mass": 67191.0, "length": 584, "protein_name": "Ubiquitin-like-specific protease 1D", "gene_name": "ULP1D", "organism": "Arabidopsis", "refseq_name": "UB-like protease 1D", "refseq_ac": [ { "id": "NP_176228", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_176228", "type": "external" } ], "gene_names_uniprotkb": "ULP1D; OTS1; T13D8.11", "gene_names_refseq": "OTS1; OVERLY TOLERANT TO SALT 1; T13D8.11; T13D8_11; UB-like protease 1D; ULP1D", "protein_names_uniprotkb": "Ubiquitin-like-specific protease 1D; 3.4.22.-; Protein OVERLY TOLERANT TO SALT 1", "protein_names_refseq": "UB-like protease 1D", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G60220)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "11130712;12482876;16740136;16920872;18849491;27862469", "class_list": "", "function": "Protease that catalyzes two essential functions in the SUMO pathway: processing of full-length SUMOs to their mature forms and deconjugation of SUMO from targeted proteins. Cleaves precursors of SUM1 and SUM2, but not of SUM3 or SUM5. Able to release SUM1 and SUM2 from conjugates, but unable to cleave SUM3. Protease activity mainly directed at deconjugating SUM1 and SUM2 from their target proteins. Regulates salt stress responses and flowering time. Redundant with ULP1C., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "O80745", "ec_number_list": [], "go_molecular_function": "GO:0016929 deSUMOylase activity;GO:0070139 SUMO-specific endopeptidase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0016607 nuclear speck", "go_biological_process": "GO:0006508 proteolysis;GO:0009651 response to salt stress;GO:0016926 protein desumoylation;GO:0010228 vegetative to reproductive phase transition of meristem", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q2PS26-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q2QAV0-1", "uniprot_id": [ { "id": "TIO_ARATH", "url": "https://www.uniprot.org/uniprot/Q2QAV0", "type": "external" } ], "mass": 145414.0, "length": 1322, "protein_name": "Serine/threonine-protein kinase TIO", "gene_name": "TIO", "organism": "Arabidopsis", "refseq_name": "kinase family with ARM repeat domain-containing protein", "refseq_ac": [ { "id": "NP_001319189", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001319189", "type": "external" } ], "gene_names_uniprotkb": "TIO; F14I3.15; FU", "gene_names_refseq": "FUSED; FU", "protein_names_uniprotkb": "Serine/threonine-protein kinase TIO; 2.7.11.1; AtFUSED; AtTIO; Fused homolog; Protein TWO-IN-ONE", "protein_names_refseq": "kinase family with ARM repeat domain-containing protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G50240)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "11130712;16332535;20466843;22060019;22709276;24146312;27862469", "class_list": "", "function": "Plays a role in conventional modes of cytokinesis in meristems and during male gametogenesis but also acts in nonconventional modes of cytokinesis (cellularization) during female gametogenesis. Constitutes a signaling module in association with Kinesin-12 members that is required to support phragmoplast expansion and cell-plate growth in plant cells., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 6, "reported_mutagensis": 3, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q2QB51;Q9SX42", "ec_number_list": [ { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.3.2.27", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.2.27", "type": "external" }, { "id": "2.7.10.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.-", "type": "external" }, { "id": "3.1.4.46", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.4.46", "type": "external" }, { "id": "2.7.11.25", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.25", "type": "external" }, { "id": "2.7.11.22", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.22", "type": "external" }, { "id": "2.7.10.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.1", "type": "external" }, { "id": "2.7.11.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.-", "type": "external" }, { "id": "2.7.11.24", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.24", "type": "external" }, { "id": "2.7.12.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.1", "type": "external" }, { "id": "2.7.11.23", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.23", "type": "external" }, { "id": "2.7.12.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.2", "type": "external" }, { "id": "2.7.-.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.-.-", "type": "external" }, { "id": "3.1.26.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.26.-", "type": "external" }, { "id": "3.1.3.16", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.16", "type": "external" }, { "id": "2.7.11.34", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.34", "type": "external" }, { "id": "4.6.1.2", "url": "https://www.rhea-db.org/rhea/?query=ec:4.6.1.2", "type": "external" } ], "go_molecular_function": "GO:0004674 protein serine/threonine kinase activity;GO:0005524 ATP binding;GO:0019894 kinesin binding;GO:0106310 protein serine kinase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0009524 phragmoplast", "go_biological_process": "GO:0007112 male meiosis cytokinesis;GO:0000911 cytokinesis by cell plate formation;GO:0009558 embryo sac cellularization", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q2QAV0-1", "record_type": "protein", "filter_code": "0000000.0100101.010000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q2V2S7-1", "uniprot_id": [ { "id": "NDHM_ARATH", "url": "https://www.uniprot.org/uniprot/Q2V2S7", "type": "external" } ], "mass": 24795.0, "length": 217, "protein_name": "NAD(P)H-quinone oxidoreductase subunit M, chloroplastic", "gene_name": "ndhM", "organism": "Arabidopsis", "refseq_name": "subunit NDH-M of NAD(P)H:plastoquinone dehydrogenase complex", "refseq_ac": [ { "id": "NP_001031804", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001031804", "type": "external" } ], "gene_names_uniprotkb": "ndhM; F20D10.40; NDH-M", "gene_names_refseq": "NADH dehydrogenase-like complex M; NDH-M; NdhM; subunit NDH-M of NAD(P)H:plastoquinone dehydrogenase complex", "protein_names_uniprotkb": "NAD(P)H-quinone oxidoreductase subunit M, chloroplastic; 7.1.1.-; NAD(P)H dehydrogenase subunit M; NADH-plastoquinone oxidoreductase subunit M; NDH subunit M; NDH-M", "protein_names_refseq": "subunit NDH-M of NAD(P)H:plastoquinone dehydrogenase complex", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G37925)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "10617198;14993207;15608332;19995722;21029720;21785130;27862469", "class_list": "", "function": "NDH shuttles electrons from NAD(P)H:plastoquinone, via FMN and iron-sulfur (Fe-S) centers, to quinones in the photosynthetic chain and possibly in a chloroplast respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q0WUL4;Q9SZJ4", "ec_number_list": [ { "id": "7.1.1.-", "url": "https://www.rhea-db.org/rhea/?query=ec:7.1.1.-", "type": "external" } ], "go_molecular_function": "GO:0048038 quinone binding;GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor", "go_cellular_component": "GO:0005886 plasma membrane;GO:0009535 chloroplast thylakoid membrane;GO:0009507 chloroplast;GO:0010598 NAD(P)H dehydrogenase complex (plastoquinone)", "go_biological_process": "GO:0010258 NADH dehydrogenase complex (plastoquinone) assembly", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q2V2S7-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q2V452-2", "uniprot_id": [ { "id": "CIPK3_ARATH", "url": "https://www.uniprot.org/uniprot/Q2V452", "type": "external" } ], "mass": 50600.0, "length": 441, "protein_name": "CBL-interacting serine/threonine-protein kinase 3", "gene_name": "CIPK3", "organism": "Arabidopsis", "refseq_name": "CBL-interacting protein kinase 3", "refseq_ac": [ { "id": "NP_850092", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_850092", "type": "external" } ], "gene_names_uniprotkb": "CIPK3; PKS12; SnRK3.17; T20P8.3", "gene_names_refseq": "CBL-INTERACTING PROTEIN KINASE 3; CBL-interacting protein kinase 3; CIPK3; SNF1-RELATED PROTEIN KINASE 3.17; SnRK3.17; T20P8.3; T20P8_3", "protein_names_uniprotkb": "CBL-interacting serine/threonine-protein kinase 3; 2.7.11.1; SNF1-related kinase 3.17; SOS2-like protein kinase PKS12", "protein_names_refseq": "CBL-interacting protein kinase 3", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G26980)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "10617197;11115898;12566581;12805596;14593172;19825536;22074104;25561503;26091701;27862469", "class_list": "", "function": "Involved in the resistance to some abiotic stresses (e.g. high salt, hyperosmotic stress) in young seedlings, by regulating the expression of several stress-inducible genes (cold- and salt-induced genes but not drought-responsive genes). Required for the ABA response during germination. CIPK serine-threonine protein kinases interact with CBL proteins. Binding of a CBL protein to the regulatory NAF domain of CIPK protein lead to the activation of the kinase in a calcium-dependent manner. The CBL9/CIPK3 complex acts in the regulation of abscisic acid response in seed germination., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 3, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q0WM53;Q2V451;Q8RWU8;Q93VA4;Q9LKC9;Q9ZVD9", "ec_number_list": [ { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.3.2.27", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.2.27", "type": "external" }, { "id": "2.7.10.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.-", "type": "external" }, { "id": "3.1.4.46", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.4.46", "type": "external" }, { "id": "2.7.11.25", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.25", "type": "external" }, { "id": "2.7.11.22", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.22", "type": "external" }, { "id": "2.7.10.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.1", "type": "external" }, { "id": "2.7.11.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.-", "type": "external" }, { "id": "2.7.11.24", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.24", "type": "external" }, { "id": "2.7.12.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.1", "type": "external" }, { "id": "2.7.11.23", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.23", "type": "external" }, { "id": "2.7.12.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.2", "type": "external" }, { "id": "2.7.-.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.-.-", "type": "external" }, { "id": "3.1.26.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.26.-", "type": "external" }, { "id": "3.1.3.16", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.16", "type": "external" }, { "id": "2.7.11.34", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.34", "type": "external" }, { "id": "4.6.1.2", "url": "https://www.rhea-db.org/rhea/?query=ec:4.6.1.2", "type": "external" } ], "go_molecular_function": "GO:0004672 protein kinase activity;GO:0004674 protein serine/threonine kinase activity;GO:0005524 ATP binding;GO:0106310 protein serine kinase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005739 mitochondrion;GO:0005777 peroxisome;GO:0005886 plasma membrane", "go_biological_process": "GO:0007165 signal transduction;GO:0009735 response to cytokinin;GO:0009737 response to abscisic acid;GO:0009738 abscisic acid-activated signaling pathway", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "Q2V452-2", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q2V4E2-1", "uniprot_id": [ { "id": "CLE8_ARATH", "url": "https://www.uniprot.org/uniprot/Q2V4E2", "type": "external" } ], "mass": 9703.0, "length": 86, "protein_name": "CLAVATA3/ESR (CLE)-related protein 8", "gene_name": "CLE8", "organism": "Arabidopsis", "refseq_name": "CLAVATA3/ESR-RELATED 8", "refseq_ac": [ { "id": "NP_001031249", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001031249", "type": "external" } ], "gene_names_uniprotkb": "CLE8; F12A21", "gene_names_refseq": "CLAVATA3/ESR-RELATED 8; CLE8", "protein_names_uniprotkb": "CLAVATA3/ESR (CLE)-related protein 8", "protein_names_refseq": "CLAVATA3/ESR-RELATED 8", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G67775)", "pathway_count": 1, "publication_count": 13, "publication_id_list": "11130712;11457943;12602871;16407446;16489133;16902140;17147637;18034320;18078779;20016993;22427333;27862469;28607033", "class_list": "", "function": "Extracellular signal peptide that regulates cell fate (PubMed:16407446). Represses root apical meristem maintenance (PubMed:16902140). Positively regulates the expression of the transcription factor WOX8 and thus, regulates early embryo development (PubMed:22427333). Regulates the transition of protophloem cells from proliferation to differentiation, thus impinging on postembryonic growth capacity of the root meristem; this signaling pathway requires CRN and CLV2 (PubMed:28607033)., [UniProtKB, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0MDK3;Q1G3X6", "ec_number_list": [], "go_molecular_function": "GO:0033612 receptor serine/threonine kinase binding", "go_cellular_component": "GO:0005739 mitochondrion;GO:0048046 apoplast", "go_biological_process": "GO:0010628 positive regulation of gene expression;GO:0045595 regulation of cell differentiation;GO:0045168 cell-cell signaling involved in cell fate commitment;GO:0009793 embryo development ending in seed dormancy;GO:0010078 maintenance of root meristem identity", "synthesized_glycan_count": 0, "hit_score": 1.4, "record_id": "Q2V4E2-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q33884-1", "uniprot_id": [ { "id": "CCMF2_ARATH", "url": "https://www.uniprot.org/uniprot/Q33884", "type": "external" } ], "mass": 23535.0, "length": 203, "protein_name": "Cytochrome c biogenesis CcmF N-terminal-like mitochondrial protein 2", "gene_name": "CCMFN2", "organism": "Arabidopsis", "refseq_name": "cytochrome c biogenesis FN2", "refseq_ac": [ { "id": "YP_009472124", "url": "https://www.ncbi.nlm.nih.gov/protein/YP_009472124", "type": "external" } ], "gene_names_uniprotkb": "CCMFN2; CC6BN2; CCB203", "gene_names_refseq": "ccb203; ccb6n2; ccmFN2", "protein_names_uniprotkb": "Cytochrome c biogenesis CcmF N-terminal-like mitochondrial protein 2; Cytochrome c biogenesis orf203", "protein_names_refseq": "cytochrome c biogenesis FN2", "tax_id": 3702, "disease": "", "pathway": "", "pathway_count": 0, "publication_count": 7, "publication_id_list": "10611383;10617197;17565941;18644794;27862469;29519893;8988169", "class_list": "", "function": "Forms a complex with CCMFC, CCMFN1 and CCMH that performs the assembly of heme with c-type apocytochromes in mitochondria., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A2P2CLH4;A7KNF1;O03602;Q9T6H7", "ec_number_list": [], "go_molecular_function": "GO:0015232 heme transmembrane transporter activity;GO:0016491 oxidoreductase activity;GO:0020037 heme binding", "go_cellular_component": "GO:0005739 mitochondrion;GO:0005743 mitochondrial inner membrane;GO:0032991 protein-containing complex", "go_biological_process": "GO:0017004 cytochrome complex assembly", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q33884-1", "record_type": "protein", "filter_code": "0000000.0000100.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q38796-1", "uniprot_id": [ { "id": "LUMI_ARATH", "url": "https://www.uniprot.org/uniprot/Q38796", "type": "external" } ], "mass": 105415.0, "length": 953, "protein_name": "Homeobox protein LUMINIDEPENDENS", "gene_name": "LD", "organism": "Arabidopsis", "refseq_name": "Homeodomain-like superfamily protein", "refseq_ac": [ { "id": "NP_001190660", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001190660", "type": "external" } ], "gene_names_uniprotkb": "LD; T10P11.15", "gene_names_refseq": "LD; T10P11.15; T10P11_15; luminidependens", "protein_names_uniprotkb": "Homeobox protein LUMINIDEPENDENS", "protein_names_refseq": "Homeodomain-like superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G02560)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "10363371;10617198;15911588;17138694;23111157;27862469;28154133;7907507", "class_list": "", "function": "Seems to play a role in the regulation of flowering time in the autonomous flowering pathway by repressing FLOWERING LOCUS C expression., [UniProtKB, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 1, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 1, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 1, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 1, "reported_phosphosites": 4, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 0, "biomarker_type": "", "glycan_count": 1, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "O22771;Q0KG59;Q0KG64;Q0KG74;Q0KG76;Q0KG77;Q0KG78;Q0KG89;Q0KG90;Q0KG91;Q0KG92;Q0KG93;Q0KG94;Q0KG97;Q0WVK1;Q58T20;Q9C5Z9", "ec_number_list": [], "go_molecular_function": "GO:0003677 DNA binding;GO:0003700 DNA-binding transcription factor activity", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0030154 cell differentiation;GO:0009908 flower development;GO:0010228 vegetative to reproductive phase transition of meristem", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "Q38796-1", "record_type": "protein", "filter_code": "0000000.0000101.010000.100000000000000000.0100000001001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q38802-1", "uniprot_id": [ { "id": "KSA_ARATH", "url": "https://www.uniprot.org/uniprot/Q38802", "type": "external" } ], "mass": 93014.0, "length": 802, "protein_name": "Ent-copalyl diphosphate synthase, chloroplastic", "gene_name": "GA1", "organism": "Arabidopsis", "refseq_name": "Terpenoid cyclases/Protein prenyltransferases superfamily protein", "refseq_ac": [ { "id": "NP_192187", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_192187", "type": "external" } ], "gene_names_uniprotkb": "GA1; ABC33; CPS1; CPS; T5J8.9; TPSGA1", "gene_names_refseq": "ABC33; ARABIDOPSIS THALIANA ENT-COPALYL DIPHOSPHATE SYNTHETASE 1; ATCPS1; CPP synthase; CPS1; CPS; ENT-COPALYL DIPHOSPHATE SYNTHETASE 1; ENT-COPALYL DIPHOSPHATE SYNTHETASE; GA REQUIRING 1; GA1; T5J8.9; T5J8_9", "protein_names_uniprotkb": "Ent-copalyl diphosphate synthase, chloroplastic; 5.5.1.13; AtCPS; Ent-CDP synthase; Ent-kaurene synthase A; KSA; Protein GA REQUIRING 1", "protein_names_refseq": "Terpenoid cyclases/Protein prenyltransferases superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G02780)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "10617198;12207221;12566586;12777052;17457817;20430888;21602811;27862469;7994182", "class_list": "", "function": "Catalyzes the conversion of geranylgeranyl diphosphate to the gibberellin precursor ent-copalyl diphosphate., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 5, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [ { "id": "5.5.1.13", "url": "https://www.rhea-db.org/rhea/?query=ec:5.5.1.13", "type": "external" } ], "go_molecular_function": "GO:0000287 magnesium ion binding;GO:0010333 terpene synthase activity;GO:0009905 ent-copalyl diphosphate synthase activity", "go_cellular_component": "GO:0009507 chloroplast", "go_biological_process": "GO:0009740 gibberellic acid mediated signaling pathway;GO:0009686 gibberellin biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "Q38802-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q38814-1", "uniprot_id": [ { "id": "THI4_ARATH", "url": "https://www.uniprot.org/uniprot/Q38814", "type": "external" } ], "mass": 36664.0, "length": 349, "protein_name": "Thiamine thiazole synthase, chloroplastic", "gene_name": "THI1", "organism": "Arabidopsis", "refseq_name": "thiazole biosynthetic enzyme, chloroplast (ARA6) (THI1) (THI4)", "refseq_ac": [ { "id": "NP_200288", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_200288", "type": "external" } ], "gene_names_uniprotkb": "THI1; ARA6; MBG8.3; THI4", "gene_names_refseq": "MBG8.3; MBG8_3; THI1 PROTEIN; THI1; THI4; THIAMINE4; THIAZOLE REQUIRING; TZ", "protein_names_uniprotkb": "Thiamine thiazole synthase, chloroplastic; 2.4.2.60; Thiazole biosynthetic enzyme", "protein_names_refseq": "thiazole biosynthetic enzyme, chloroplast (ARA6) (THI1) (THI4)", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G54770)", "pathway_count": 1, "publication_count": 18, "publication_id_list": "11575719;12482914;12941878;14593172;15897230;16912043;18431481;21922322;22031445;22092075;22214485;24637331;25561503;26662273;27862469;8771789;8790291;9330910", "class_list": "", "function": "Involved in biosynthesis of the thiamine precursor thiazole. Catalyzes the conversion of NAD and glycine to adenosine diphosphate 5-(2-hydroxyethyl)-4-methylthiazole-2-carboxylic acid (ADT), an adenylated thiazole intermediate. The reaction includes an iron-dependent sulfide transfer from a conserved cysteine residue of the protein to a thiazole intermediate. The enzyme can only undergo a single turnover, which suggests it is a suicide enzyme. May have additional roles in adaptation to various stress conditions and in DNA damage tolerance. Acts as a positive regulator for the abscisic acid-induced activation of slow type anion channels during stomatal closure by repressing CPK33 kinase activity., [UniProtKB, PubMed, HAMAP, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 10, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [ { "id": "2.4.2.60", "url": "https://www.rhea-db.org/rhea/?query=ec:2.4.2.60", "type": "external" } ], "go_molecular_function": "GO:0005506 iron ion binding;GO:0008270 zinc ion binding;GO:0019904 protein domain specific binding;GO:0042803 protein homodimerization activity;GO:0160205 cysteine-dependent adenosine diphosphate thiazole synthase activity", "go_cellular_component": "GO:0005739 mitochondrion;GO:0005829 cytosol;GO:0005886 plasma membrane;GO:0009507 chloroplast;GO:0009536 plastid", "go_biological_process": "GO:0009409 response to cold;GO:0006974 DNA damage response;GO:0052837 thiazole biosynthetic process;GO:0009228 thiamine biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 1.9, "record_id": "Q38814-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q38819-1", "uniprot_id": [ { "id": "CCA23_ARATH", "url": "https://www.uniprot.org/uniprot/Q38819", "type": "external" } ], "mass": 50642.0, "length": 450, "protein_name": "Cyclin-A2-3", "gene_name": "CYCA2-3", "organism": "Arabidopsis", "refseq_name": "CYCLIN A2;3", "refseq_ac": [ { "id": "NP_173010", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_173010", "type": "external" } ], "gene_names_uniprotkb": "CYCA2-3; CYC3C; T16N11.8", "gene_names_refseq": "3; CYCA2; CYCLIN A2; T16N11.8; T16N11_8", "protein_names_uniprotkb": "Cyclin-A2-3; 3; Cyc3c-At; CycA2; Cyclin-3c; G2/mitotic-specific cyclin-A2-3", "protein_names_refseq": "3; CYCLIN A2", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G15570)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "11130712;14593172;15208425;16415207;21772250;22869741;24687979;27862469", "class_list": "", "function": "Negatively regulates endocycles and acts as a regulator of ploidy levels in endoreduplication (PubMed:16415207). Promotes divisions in the guard cells (GCs) after the guard mother cells (GMC) symmetric division (PubMed:24687979)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q8VYG1;Q9M9D7", "ec_number_list": [], "go_molecular_function": "GO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0000307 cyclin-dependent protein kinase holoenzyme complex", "go_biological_process": "GO:0051301 cell division;GO:0010389 regulation of G2/M transition of mitotic cell cycle;GO:0044839 cell cycle G2/M phase transition;GO:0000082 G1/S transition of mitotic cell cycle;GO:0042023 DNA endoreduplication", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "Q38819-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q38834-1", "uniprot_id": [ { "id": "R13L4_ARATH", "url": "https://www.uniprot.org/uniprot/Q38834", "type": "external" } ], "mass": 97040.0, "length": 852, "protein_name": "Disease resistance RPP13-like protein 4", "gene_name": "RPP13L4", "organism": "Arabidopsis", "refseq_name": "HOPZ-ACTIVATED RESISTANCE 1", "refseq_ac": [ { "id": "NP_190664", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_190664", "type": "external" } ], "gene_names_uniprotkb": "RPP13L4; F18B3.230; ZAR1", "gene_names_refseq": "HOPZ-ACTIVATED RESISTANCE 1; ZAR1", "protein_names_uniprotkb": "Disease resistance RPP13-like protein 4; AtZAR1; Disease resistance protein ZAR1; Protein HOPZ-ACTIVATED RESISTANCE 1", "protein_names_refseq": "HOPZ-ACTIVATED RESISTANCE 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G50950)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "11130713;20368970;24170858;26355215;27862469;28288096;28499073;28652264;30948526;30948527", "class_list": "", "function": "CC-NB-LRR receptor-like protein required for recognition of pathogenic bacteria type III effectors (T3E) such as Pseudomonas syringae HopZ1a and HopF2a and Xanthomonas campestris pv. campestris (Xcc) XopAC/AvrAC; this recognition requires ZED1-related kinases (e.g. PBL2, ZRK3 and ZED1/ZRK5) (PubMed:20368970, PubMed:26355215, PubMed:28288096, PubMed:28652264, PubMed:30948526, PubMed:30948527). Confers allele-specific recognition and virulence attenuation of HopZ1a (PubMed:20368970). Immunity mediated by RPP13L4/ZAR1 is independent of several genes required by other resistance protein signaling pathways such as NDR1 and RAR1 (PubMed:20368970). Together with ZED1/ZRK5, involved in the regulation of the ambient temperature-sensitive intersection of growth and immune response in the absence of pathogens (PubMed:28499073)., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 24, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q0WUW7;Q9SVK4", "ec_number_list": [], "go_molecular_function": "GO:0043531 ADP binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005886 plasma membrane", "go_biological_process": "GO:0098542 defense response to other organism;GO:0050829 defense response to Gram-negative bacterium;GO:0050776 regulation of immune response;GO:0042742 defense response to bacterium", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "Q38834-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q38846-1", "uniprot_id": [ { "id": "ERS1_ARATH", "url": "https://www.uniprot.org/uniprot/Q38846", "type": "external" } ], "mass": 68333.0, "length": 613, "protein_name": "Ethylene response sensor 1", "gene_name": "ERS1", "organism": "Arabidopsis", "refseq_name": "ethylene response sensor 1", "refseq_ac": [ { "id": "NP_181626", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_181626", "type": "external" } ], "gene_names_uniprotkb": "ERS1; ERS; T20B5.14", "gene_names_refseq": "ERS1; ERS; ETHYLENE RESPONSE SENSOR; T20B5.14; T20B5_14; ethylene response sensor 1", "protein_names_uniprotkb": "Ethylene response sensor 1; 2.7.11.-; 2.7.13.3; AtERS1; Protein ERS1", "protein_names_refseq": "ethylene response sensor 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G40940)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "10617197;10938361;14593172;15358768;17224067;18577522;27862469;7569898;9707532", "class_list": "", "function": "Ethylene receptor related to bacterial two-component regulators. Acts as a redundant negative regulator of ethylene signaling., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0004674 protein serine/threonine kinase activity;GO:0005524 ATP binding;GO:0046872 metal ion binding;GO:0000155 phosphorelay sensor kinase activity;GO:0004673 protein histidine kinase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005783 endoplasmic reticulum;GO:0005789 endoplasmic reticulum membrane", "go_biological_process": "GO:0010105 negative regulation of ethylene-activated signaling pathway", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "Q38846-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q38854-1", "uniprot_id": [ { "id": "DXS_ARATH", "url": "https://www.uniprot.org/uniprot/Q38854", "type": "external" } ], "mass": 76833.0, "length": 717, "protein_name": "1-deoxy-D-xylulose-5-phosphate synthase, chloroplastic", "gene_name": "DXS", "organism": "Arabidopsis", "refseq_name": "Deoxyxylulose-5-phosphate synthase", "refseq_ac": [ { "id": "NP_193291", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_193291", "type": "external" } ], "gene_names_uniprotkb": "DXS; CLA1; DEF; dl3821w", "gene_names_refseq": "1-DEOXY-D-XYLULOSE 5-PHOSPHATE SYNTHASE 2; 1-DEOXY-D-XYLULOSE 5-PHOSPHATE SYNTHASE; 1-deoxy-D-xylulose 5-phosphate (DXP) synthase 1; AtCLA1; CLA1; CLA; CLOROPLASTOS ALTERADOS 1; DEF; DL3821W; DXPS2; DXS1; DXS; FCAALL.24", "protein_names_uniprotkb": "1-deoxy-D-xylulose-5-phosphate synthase, chloroplastic; 1-deoxyxylulose-5-phosphate synthase; 2.2.1.7; DXP synthase; DXPS; Protein CLOROPLASTOS ALTERADOS 1", "protein_names_refseq": "Deoxyxylulose-5-phosphate synthase", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G15560)", "pathway_count": 1, "publication_count": 15, "publication_id_list": "10617198;10982425;11264287;12447549;14593172;15863698;18236010;19376835;21768351;23660473;25561503;27862469;29167316;8653115;9461215", "class_list": "", "function": "Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP). Is a limiting enzyme for plastidic isoprenoid biosynthesis and essential for chloroplast development., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 4, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O23407;O49738", "ec_number_list": [ { "id": "2.2.1.7", "url": "https://www.rhea-db.org/rhea/?query=ec:2.2.1.7", "type": "external" } ], "go_molecular_function": "GO:0042802 identical protein binding;GO:0046872 metal ion binding;GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity;GO:0016744 transketolase or transaldolase activity", "go_cellular_component": "GO:0009507 chloroplast;GO:0009570 chloroplast stroma", "go_biological_process": "GO:0016114 terpenoid biosynthetic process;GO:0009228 thiamine biosynthetic process;GO:0015995 chlorophyll biosynthetic process;GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway", "synthesized_glycan_count": 0, "hit_score": 1.6, "record_id": "Q38854-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q38856-1", "uniprot_id": [ { "id": "IRT1_ARATH", "url": "https://www.uniprot.org/uniprot/Q38856", "type": "external" } ], "mass": 36727.0, "length": 347, "protein_name": "Fe(2+) transport protein 1", "gene_name": "IRT1", "organism": "Arabidopsis", "refseq_name": "iron-regulated transporter 1", "refseq_ac": [ { "id": "NP_567590", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_567590", "type": "external" } ], "gene_names_uniprotkb": "IRT1; T16H5.50", "gene_names_refseq": "ARABIDOPSIS IRON-REGULATED TRANSPORTER 1; ATIRT1; IRT1; T16H5.50; T16H5_50; iron-regulated transporter 1", "protein_names_uniprotkb": "Fe(2+) transport protein 1; Fe(II) transport protein 1; Iron-regulated transporter 1", "protein_names_refseq": "iron-regulated transporter 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G19690)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "10394943;10617198;11035780;12084823;21628566;24843126;27862469;8643627;9784581", "class_list": "", "function": "High-affinity iron transporter that plays a key role in the uptake of iron from the rhizosphere across the plasma membrane in the root epidermal layer. Acts as the principal regulator of iron homeostasis in planta. Also mediates the heavy metals uptake under iron-deficiency by its ability to transport cobalt, cadmium, manganese and/or zinc ions., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 11, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q8LBP0", "ec_number_list": [], "go_molecular_function": "GO:0005385 zinc ion transmembrane transporter activity;GO:0005375 copper ion transmembrane transporter activity;GO:0005384 manganese ion transmembrane transporter activity;GO:0015086 cadmium ion transmembrane transporter activity;GO:0005381 iron ion transmembrane transporter activity", "go_cellular_component": "GO:0005768 endosome;GO:0005769 early endosome;GO:0005886 plasma membrane;GO:0005802 trans-Golgi network;GO:0005773 vacuole", "go_biological_process": "GO:0071577 zinc ion transmembrane transport;GO:0006829 zinc ion transport;GO:0006879 intracellular iron ion homeostasis;GO:0009617 response to bacterium;GO:0030001 metal ion transport", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "Q38856-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q38857-1", "uniprot_id": [ { "id": "XTH22_ARATH", "url": "https://www.uniprot.org/uniprot/Q38857", "type": "external" } ], "mass": 32093.0, "length": 284, "protein_name": "Xyloglucan endotransglucosylase/hydrolase protein 22", "gene_name": "XTH22", "organism": "Arabidopsis", "refseq_name": "Xyloglucan endotransglucosylase/hydrolase family protein", "refseq_ac": [ { "id": "NP_200564", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_200564", "type": "external" } ], "gene_names_uniprotkb": "XTH22; MUA2.13; TCH4", "gene_names_refseq": "MUA2.13; MUA2_13; TCH4; Touch 4; XTH22; XYLOGLUCAN ENDOTRANSGLYCOSYLASE; xyloglucan endotransglucosylase/hydrolase 22", "protein_names_uniprotkb": "Xyloglucan endotransglucosylase/hydrolase protein 22; 2.4.1.207; At-XTH22; Touch protein 4; XTH-22", "protein_names_refseq": "Xyloglucan endotransglucosylase/hydrolase family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G57560)", "pathway_count": 1, "publication_count": 11, "publication_id_list": "10406121;11673616;12514239;14593172;27862469;7580251;8696366;9306698;9414546;9679202;9753780", "class_list": "glycogene;glycosylhydrolase", "function": "Catalyzes xyloglucan endohydrolysis (XEH) and/or endotransglycosylation (XET). Cleaves and religates xyloglucan polymers, an essential constituent of the primary cell wall, and thereby participates in cell wall construction of growing tissues. Its induction in case of mechanical stress, suggests that it may contribute in the adaptive changes in morphogenesis by being recruited to alter tissues tensil strength, or flexibility, enabling adaptation to mechanically stressful environments., [UniProtKB, PubMed]", "predicted_glycosites": 2, "predicted_n_glycosites": 2, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 2, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 2, "binding_glycan_count": 0, "secondary_ac_list": "Q8H783", "ec_number_list": [], "go_molecular_function": "GO:0030247 polysaccharide binding;GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds;GO:0016762 xyloglucan:xyloglucosyl transferase activity", "go_cellular_component": "GO:0099503 secretory vesicle;GO:0005794 Golgi apparatus;GO:0009505 plant-type cell wall;GO:0009507 chloroplast;GO:0048046 apoplast", "go_biological_process": "GO:0009409 response to cold;GO:0071456 cellular response to hypoxia;GO:0009612 response to mechanical stimulus;GO:0009408 response to heat;GO:0009741 response to brassinosteroid", "synthesized_glycan_count": 0, "hit_score": 1.2, "record_id": "Q38857-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000010000.001.10100", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q38858-1", "uniprot_id": [ { "id": "CALR2_ARATH", "url": "https://www.uniprot.org/uniprot/Q38858", "type": "external" } ], "mass": 48157.0, "length": 424, "protein_name": "Calreticulin-2", "gene_name": "CRT2", "organism": "Arabidopsis", "refseq_name": "calreticulin 1b", "refseq_ac": [ { "id": "NP_172392", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_172392", "type": "external" } ], "gene_names_uniprotkb": "CRT2; CRTL; T12M4.8", "gene_names_refseq": "AtCRT1b; CRT1b; T12M4.8; T12M4_8; calreticulin 1b", "protein_names_uniprotkb": "Calreticulin-2", "protein_names_refseq": "calreticulin 1b", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G09210)", "pathway_count": 1, "publication_count": 21, "publication_id_list": "11130712;14593172;19376835;20466843;20733066;21768351;22631563;23328941;23572148;23660473;23776212;23820729;24601666;25561503;26091701;26187819;27532006;27862469;28011693;29167316;9159940", "class_list": "", "function": "Molecular calcium-binding chaperone promoting folding, oligomeric assembly and quality control in the ER via the calreticulin/calnexin cycle. This lectin may interact transiently with almost all of the monoglucosylated glycoproteins that are synthesized in the ER (By similarity)., [UniProtKB]", "predicted_glycosites": 1, "predicted_n_glycosites": 1, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 9, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "O04152;O80486;Q94AW7", "ec_number_list": [], "go_molecular_function": "GO:0051082 unfolded protein binding;GO:0005509 calcium ion binding;GO:0030246 carbohydrate binding", "go_cellular_component": "GO:0099503 secretory vesicle;GO:0005576 extracellular region;GO:0005739 mitochondrion;GO:0005783 endoplasmic reticulum;GO:0005788 endoplasmic reticulum lumen", "go_biological_process": "GO:0006457 protein folding;GO:0036503 ERAD pathway;GO:0034976 response to endoplasmic reticulum stress", "synthesized_glycan_count": 0, "hit_score": 2.2, "record_id": "Q38858-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000010001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q38860-1", "uniprot_id": [ { "id": "KCS18_ARATH", "url": "https://www.uniprot.org/uniprot/Q38860", "type": "external" } ], "mass": 56264.0, "length": 506, "protein_name": "3-ketoacyl-CoA synthase 18", "gene_name": "FAE1", "organism": "Arabidopsis", "refseq_name": "3-ketoacyl-CoA synthase 18", "refseq_ac": [ { "id": "NP_195178", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_195178", "type": "external" } ], "gene_names_uniprotkb": "FAE1; KCS18; T4L20.100", "gene_names_refseq": "3-ketoacyl-CoA synthase 18; FAE1; FATTY ACID ELONGATION1; KCS18; T4L20.100; T4L20_100", "protein_names_uniprotkb": "3-ketoacyl-CoA synthase 18; 2.3.1.199; KCS-18; Protein FATTY ACID ELONGATION 1; VLCFA condensing enzyme 18; Very long-chain fatty acid condensing enzyme 18", "protein_names_refseq": "3-ketoacyl-CoA synthase 18", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G34520)", "pathway_count": 1, "publication_count": 13, "publication_id_list": "10617198;11341960;11575726;12135493;12916765;15277688;16765910;18465198;22284369;23145136;27862469;7734965;9263455", "class_list": "", "function": "Contributes to fatty acids elongation and stockage in developing seeds. Active on both saturated and mono-unsaturated acyl-CoAs of 16 and 18 carbons. Required for the elongation of C18 to C20 and of C20 to C22 fatty acids. Also mediates the synthesis of VLCFAs from 20 to 26 carbons in length (e.g. C20:1, C20, C22:1, C22, C24:1, C24, C26) (PubMed:12135493, PubMed:15277688, PubMed:16765910, PubMed:23145136, PubMed:7734965, PubMed:9263455, Ref.4, Ref.5). Has no activity with polyunsaturated C18:2 and C18:3 or with acyl-CoAs having 22 carbons or longer chain length (PubMed:12135493)., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed, UniProtKB, UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 23, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [ { "id": "2.3.1.199", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.1.199", "type": "external" }, { "id": "2.3.1.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.1.-", "type": "external" } ], "go_molecular_function": "GO:0009922 fatty acid elongase activity", "go_cellular_component": "GO:0005783 endoplasmic reticulum;GO:0016020 membrane;GO:0009507 chloroplast", "go_biological_process": "GO:0000038 very long-chain fatty acid metabolic process;GO:0030497 fatty acid elongation", "synthesized_glycan_count": 0, "hit_score": 1.4, "record_id": "Q38860-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q38861-1", "uniprot_id": [ { "id": "XPB1_ARATH", "url": "https://www.uniprot.org/uniprot/Q38861", "type": "external" } ], "mass": 87062.0, "length": 767, "protein_name": "General transcription and DNA repair factor IIH helicase/translocase subunit XPB1", "gene_name": "XPB1", "organism": "Arabidopsis", "refseq_name": "DNA repair helicase XPB1-like protein", "refseq_ac": [ { "id": "NP_568592", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_568592", "type": "external" } ], "gene_names_uniprotkb": "XPB1; MYC6.8; XPB", "gene_names_refseq": "ARABIDOPSIS HOMOLOG OF XERODERMA PIGMENTOSUM COMPLEMENTATION GROUP B 1; ATXPB1; MYC6.8; MYC6_8; XPB1; homolog of xeroderma pigmentosum complementation group B 1", "protein_names_uniprotkb": "General transcription and DNA repair factor IIH helicase/translocase subunit XPB1; 5.6.2.4; AtXPB1; DNA 3'-5' helicase/translocase XPB1; ERCC3 homolog 1; Protein araXPB; RAD25 homolog 1; TFIIH subunit XPB; XPB homolog 1", "protein_names_refseq": "DNA repair helicase XPB1-like protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G41370)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "11737776;14593172;15645454;15656976;23111157;24265739;27862469;9405937;9524267", "class_list": "", "function": "ATP-dependent 3'-5' DNA helicase/translocase; binds dsDNA rather than ssDNA, unzipping it in a translocase rather than classical helicase activity (By similarity). Component of the general transcription and DNA repair factor IIH (TFIIH) core complex. When complexed to CDK-activating kinase (CAK), involved in RNA transcription by RNA polymerase II. The ATPase activity of XPB/ERCC3, but not its helicase activity, is required for DNA opening; it may wrap around the damaged DNA wedging it open, causing localized melting and twisting that allows XPD/ERCC2 helicase to anchor. The ATP-dependent helicase activity of XPB/ERCC3 may be required for promoter escape. Also involved in transcription-coupled nucleotide excision repair (NER) of damaged DNA. In NER, TFIIH acts by opening DNA around the lesion to allow the excision of the damaged oligonucleotide and its replacement by a new DNA fragment. The structure of the TFIIH transcription complex differs from the NER-TFIIH complex (By similarity). Partially complements UV sensitivity of a yeast SSL2 mutation (PubMed:11737776). Required during the early stages of development, including seed germination (PubMed:11737776)., [UniProtKB, PubMed, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O04171;Q6JA92;Q9FN63", "ec_number_list": [ { "id": "3.1.-.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.-.-", "type": "external" }, { "id": "5.6.2.3", "url": "https://www.rhea-db.org/rhea/?query=ec:5.6.2.3", "type": "external" }, { "id": "3.6.4.12", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.4.12", "type": "external" }, { "id": "3.6.-.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.-.-", "type": "external" }, { "id": "2.7.7.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.7.-", "type": "external" }, { "id": "3.6.4.13", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.4.13", "type": "external" }, { "id": "5.6.2.4", "url": "https://www.rhea-db.org/rhea/?query=ec:5.6.2.4", "type": "external" }, { "id": "5.6.2.-", "url": "https://www.rhea-db.org/rhea/?query=ec:5.6.2.-", "type": "external" }, { "id": "3.6.1.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.1.-", "type": "external" }, { "id": "3.6.4.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.4.-", "type": "external" }, { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.7.4.3", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.4.3", "type": "external" }, { "id": "5.6.2.5", "url": "https://www.rhea-db.org/rhea/?query=ec:5.6.2.5", "type": "external" }, { "id": "7.2.2.-", "url": "https://www.rhea-db.org/rhea/?query=ec:7.2.2.-", "type": "external" }, { "id": "3.6.4.6", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.4.6", "type": "external" }, { "id": "3.6.1.25", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.1.25", "type": "external" } ], "go_molecular_function": "GO:0043138 3'-5' DNA helicase activity;GO:0003677 DNA binding;GO:0005524 ATP binding;GO:0016887 ATP hydrolysis activity", "go_cellular_component": "GO:0097550 transcription preinitiation complex;GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005675 transcription factor TFIIH holo complex;GO:0000112 nucleotide-excision repair factor 3 complex", "go_biological_process": "GO:0009411 response to UV;GO:0006367 transcription initiation at RNA polymerase II promoter;GO:0006289 nucleotide-excision repair", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "Q38861-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q38868-1", "uniprot_id": [ { "id": "CDPK9_ARATH", "url": "https://www.uniprot.org/uniprot/Q38868", "type": "external" } ], "mass": 60363.0, "length": 541, "protein_name": "Calcium-dependent protein kinase 9", "gene_name": "CPK9", "organism": "Arabidopsis", "refseq_name": "calmodulin-domain protein kinase 9", "refseq_ac": [ { "id": "NP_001327803", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001327803", "type": "external" } ], "gene_names_uniprotkb": "CPK9; MQC12.23", "gene_names_refseq": "CPK9; calmodulin-domain protein kinase 9", "protein_names_uniprotkb": "Calcium-dependent protein kinase 9; 2.7.11.1; Calmodulin-domain protein kinase CDPK isoform 9", "protein_names_refseq": "calmodulin-domain protein kinase 9", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G20410)", "pathway_count": 1, "publication_count": 26, "publication_id_list": "10819329;12068094;12805596;12913141;14593172;15308754;17317660;17651370;18463617;19029837;19376835;20374526;20466843;21768351;22060019;23111157;23328941;23660473;23776212;24601666;25561503;27862469;28011693;29167316;30833711;8756605", "class_list": "", "function": "May play a role in signal transduction pathways that involve calcium as a second messenger., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 12, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [ { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.3.2.27", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.2.27", "type": "external" }, { "id": "2.7.10.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.-", "type": "external" }, { "id": "3.1.4.46", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.4.46", "type": "external" }, { "id": "2.7.11.25", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.25", "type": "external" }, { "id": "2.7.11.22", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.22", "type": "external" }, { "id": "2.7.10.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.1", "type": "external" }, { "id": "2.7.11.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.-", "type": "external" }, { "id": "2.7.11.24", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.24", "type": "external" }, { "id": "2.7.12.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.1", "type": "external" }, { "id": "2.7.11.23", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.23", "type": "external" }, { "id": "2.7.12.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.2", "type": "external" }, { "id": "2.7.-.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.-.-", "type": "external" }, { "id": "3.1.26.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.26.-", "type": "external" }, { "id": "3.1.3.16", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.16", "type": "external" }, { "id": "2.7.11.34", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.34", "type": "external" }, { "id": "4.6.1.2", "url": "https://www.rhea-db.org/rhea/?query=ec:4.6.1.2", "type": "external" } ], "go_molecular_function": "GO:0009931 calcium-dependent protein serine/threonine kinase activity;GO:0005516 calmodulin binding;GO:0005524 ATP binding;GO:0005509 calcium ion binding;GO:0004683 calcium/calmodulin-dependent protein kinase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005829 cytosol;GO:0005886 plasma membrane", "go_biological_process": "GO:0007165 signal transduction;GO:0035556 intracellular signal transduction", "synthesized_glycan_count": 0, "hit_score": 2.7, "record_id": "Q38868-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q38870-1", "uniprot_id": [ { "id": "CDPK2_ARATH", "url": "https://www.uniprot.org/uniprot/Q38870", "type": "external" } ], "mass": 72254.0, "length": 646, "protein_name": "Calcium-dependent protein kinase 2", "gene_name": "CPK2", "organism": "Arabidopsis", "refseq_name": "calmodulin-domain protein kinase cdpk isoform 2", "refseq_ac": [ { "id": "NP_001326044", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001326044", "type": "external" } ], "gene_names_uniprotkb": "CPK2; F13M14.5; F18K10.28", "gene_names_refseq": "ATCPK2; CPK2; calmodulin-domain protein kinase cdpk isoform 2", "protein_names_uniprotkb": "Calcium-dependent protein kinase 2; 2.7.11.1; Calmodulin-domain protein kinase CDPK isoform 2", "protein_names_refseq": "calmodulin-domain protein kinase cdpk isoform 2", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G10660)", "pathway_count": 1, "publication_count": 12, "publication_id_list": "11130713;11891256;12068094;12805596;12912986;19029837;23572148;23660473;25561503;27419465;27862469;8756605", "class_list": "", "function": "May play a role in signal transduction pathways that involve calcium as a second messenger., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [ { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.3.2.27", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.2.27", "type": "external" }, { "id": "2.7.10.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.-", "type": "external" }, { "id": "3.1.4.46", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.4.46", "type": "external" }, { "id": "2.7.11.25", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.25", "type": "external" }, { "id": "2.7.11.22", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.22", "type": "external" }, { "id": "2.7.10.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.1", "type": "external" }, { "id": "2.7.11.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.-", "type": "external" }, { "id": "2.7.11.24", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.24", "type": "external" }, { "id": "2.7.12.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.1", "type": "external" }, { "id": "2.7.11.23", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.23", "type": "external" }, { "id": "2.7.12.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.2", "type": "external" }, { "id": "2.7.-.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.-.-", "type": "external" }, { "id": "3.1.26.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.26.-", "type": "external" }, { "id": "3.1.3.16", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.16", "type": "external" }, { "id": "2.7.11.34", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.34", "type": "external" }, { "id": "4.6.1.2", "url": "https://www.rhea-db.org/rhea/?query=ec:4.6.1.2", "type": "external" } ], "go_molecular_function": "GO:0009931 calcium-dependent protein serine/threonine kinase activity;GO:0005516 calmodulin binding;GO:0005524 ATP binding;GO:0005509 calcium ion binding;GO:0004683 calcium/calmodulin-dependent protein kinase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005886 plasma membrane;GO:0005789 endoplasmic reticulum membrane", "go_biological_process": "GO:0035556 intracellular signal transduction", "synthesized_glycan_count": 0, "hit_score": 1.3, "record_id": "Q38870-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q38871-1", "uniprot_id": [ { "id": "CDPK5_ARATH", "url": "https://www.uniprot.org/uniprot/Q38871", "type": "external" } ], "mass": 62127.0, "length": 556, "protein_name": "Calcium-dependent protein kinase 5", "gene_name": "CPK5", "organism": "Arabidopsis", "refseq_name": "calmodulin-domain protein kinase 5", "refseq_ac": [ { "id": "NP_001329080", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001329080", "type": "external" } ], "gene_names_uniprotkb": "CPK5; F23E12.130", "gene_names_refseq": "ATCPK5; CALMODULIN-DOMAIN PROTEIN KINASE 5; CPK5; F23E12.130; F23E12_130; calmodulin-domain protein kinase 5", "protein_names_uniprotkb": "Calcium-dependent protein kinase 5; 2.7.11.1; Calmodulin-domain protein kinase CDPK isoform 5", "protein_names_refseq": "calmodulin-domain protein kinase 5", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G35310)", "pathway_count": 1, "publication_count": 27, "publication_id_list": "10617198;12068094;12805596;18433157;18463617;19245862;19376835;20466843;20733066;21768351;23111157;23328941;23572148;23660473;23776212;23820729;24043427;24601666;24924143;25561503;26091701;27419465;27862469;28011693;29167316;30833711;8756605", "class_list": "", "function": "May play a role in signal transduction pathways that involve calcium as a second messenger., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 10, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [ { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.3.2.27", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.2.27", "type": "external" }, { "id": "2.7.10.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.-", "type": "external" }, { "id": "3.1.4.46", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.4.46", "type": "external" }, { "id": "2.7.11.25", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.25", "type": "external" }, { "id": "2.7.11.22", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.22", "type": "external" }, { "id": "2.7.10.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.1", "type": "external" }, { "id": "2.7.11.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.-", "type": "external" }, { "id": "2.7.11.24", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.24", "type": "external" }, { "id": "2.7.12.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.1", "type": "external" }, { "id": "2.7.11.23", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.23", "type": "external" }, { "id": "2.7.12.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.2", "type": "external" }, { "id": "2.7.-.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.-.-", "type": "external" }, { "id": "3.1.26.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.26.-", "type": "external" }, { "id": "3.1.3.16", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.16", "type": "external" }, { "id": "2.7.11.34", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.34", "type": "external" }, { "id": "4.6.1.2", "url": "https://www.rhea-db.org/rhea/?query=ec:4.6.1.2", "type": "external" } ], "go_molecular_function": "GO:0009931 calcium-dependent protein serine/threonine kinase activity;GO:0005516 calmodulin binding;GO:0005524 ATP binding;GO:0005509 calcium ion binding;GO:0004683 calcium/calmodulin-dependent protein kinase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005829 cytosol;GO:0005886 plasma membrane;GO:0016020 membrane", "go_biological_process": "GO:0035556 intracellular signal transduction", "synthesized_glycan_count": 0, "hit_score": 2.8, "record_id": "Q38871-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q38872-1", "uniprot_id": [ { "id": "CDPK6_ARATH", "url": "https://www.uniprot.org/uniprot/Q38872", "type": "external" } ], "mass": 61111.0, "length": 544, "protein_name": "Calcium-dependent protein kinase 6", "gene_name": "CPK6", "organism": "Arabidopsis", "refseq_name": "Calcium-dependent protein kinase family protein", "refseq_ac": [ { "id": "NP_001324056", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001324056", "type": "external" } ], "gene_names_uniprotkb": "CPK6; CDPK3; F5J6.13", "gene_names_refseq": "ARABIDOPSIS THALIANA CALCIUM-DEPENDENT PROTEIN KINASE 6; ARABIDOPSIS THALIANA CALMODULIN-DOMAIN PROTEIN KINASE 3; ATCDPK3; ATCPK6; CALCIUM-DEPENDENT PROTEIN KINASE 6; CALMODULIN-DOMAIN PROTEIN KINASE 3; CPK6; F5J6.13; F5J6_13; calcium dependent protein kinase 6", "protein_names_uniprotkb": "Calcium-dependent protein kinase 6; 2.7.11.1; AtCDPK3; Calcium-dependent protein kinase isoform CDPK3; Calmodulin-domain protein kinase CDPK isoform 6", "protein_names_refseq": "Calcium-dependent protein kinase family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G17290)", "pathway_count": 1, "publication_count": 31, "publication_id_list": "10617197;12068094;12805596;14593172;17032064;17317660;18463617;19029837;19245862;20385816;20466843;20733066;23111157;23328941;23572148;23660473;23776212;23820729;24601666;24924143;25561503;25661797;26091701;26187819;27419465;27532006;27862469;29167316;30833711;7972512;8756605", "class_list": "", "function": "May play a role in signal transduction pathways that involve calcium as a second messenger. Functions in abscisic acid (ABA) regulation of guard cell S-type anion- and Ca(2+)-permeable channels and stomatal closure (PubMed:17032064). Phosphorylates FD (PubMed:25661797)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 8, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q39014", "ec_number_list": [ { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.3.2.27", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.2.27", "type": "external" }, { "id": "2.7.10.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.-", "type": "external" }, { "id": "3.1.4.46", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.4.46", "type": "external" }, { "id": "2.7.11.25", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.25", "type": "external" }, { "id": "2.7.11.22", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.22", "type": "external" }, { "id": "2.7.10.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.1", "type": "external" }, { "id": "2.7.11.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.-", "type": "external" }, { "id": "2.7.11.24", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.24", "type": "external" }, { "id": "2.7.12.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.1", "type": "external" }, { "id": "2.7.11.23", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.23", "type": "external" }, { "id": "2.7.12.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.2", "type": "external" }, { "id": "2.7.-.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.-.-", "type": "external" }, { "id": "3.1.26.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.26.-", "type": "external" }, { "id": "3.1.3.16", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.16", "type": "external" }, { "id": "2.7.11.34", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.34", "type": "external" }, { "id": "4.6.1.2", "url": "https://www.rhea-db.org/rhea/?query=ec:4.6.1.2", "type": "external" } ], "go_molecular_function": "GO:0009931 calcium-dependent protein serine/threonine kinase activity;GO:0004674 protein serine/threonine kinase activity;GO:0005516 calmodulin binding;GO:0005524 ATP binding;GO:0005509 calcium ion binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005739 mitochondrion;GO:0005829 cytosol;GO:0005886 plasma membrane", "go_biological_process": "GO:0035556 intracellular signal transduction;GO:0046777 protein autophosphorylation;GO:0009738 abscisic acid-activated signaling pathway;GO:0010119 regulation of stomatal movement;GO:1902456 regulation of stomatal opening", "synthesized_glycan_count": 0, "hit_score": 3.2, "record_id": "Q38872-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q38874-1", "uniprot_id": [ { "id": "STM_ARATH", "url": "https://www.uniprot.org/uniprot/Q38874", "type": "external" } ], "mass": 42753.0, "length": 382, "protein_name": "Homeobox protein SHOOT MERISTEMLESS", "gene_name": "STM", "organism": "Arabidopsis", "refseq_name": "KNOX/ELK homeobox transcription factor", "refseq_ac": [ { "id": "NP_176426", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_176426", "type": "external" } ], "gene_names_uniprotkb": "STM; F2401.9", "gene_names_refseq": "BUM1; BUMBERSHOOT 1; BUMBERSHOOT; BUM; F24O1.38; F24O1_38; HOMEOBOX PROTEIN SHOOTMERISTEMLESS; SHL; SHOOT MERISTEMLESS; SHOOTLESS; STM; WALDMEISTER 1; WALDMEISTER; WAM1; WAM", "protein_names_uniprotkb": "Homeobox protein SHOOT MERISTEMLESS", "protein_names_refseq": "KNOX/ELK homeobox transcription factor", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G62360)", "pathway_count": 1, "publication_count": 13, "publication_id_list": "10079219;11130712;11701881;11934861;14593172;16513846;16741748;17965274;21868675;25561503;27862469;29742441;8538741", "class_list": "", "function": "Required for shoot apical meristem (SAM) formation during embryogenesis. Negatively regulates ASYMMETRIC LEAVES1 (AS1) and ASYMMETRIC LEAVES2 (AS2 or LBD6). Probably binds to the DNA sequence 5'-TGAC-3'. Binds to RNA (By similarity)., [UniProtKB, PubMed, PubMed, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q8RXJ1;Q9MAV3", "ec_number_list": [], "go_molecular_function": "GO:0003700 DNA-binding transcription factor activity;GO:0003723 RNA binding;GO:0042803 protein homodimerization activity;GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding;GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005768 endosome;GO:0005886 plasma membrane;GO:0015630 microtubule cytoskeleton", "go_biological_process": "GO:0006357 regulation of transcription by RNA polymerase II;GO:0019827 stem cell population maintenance;GO:0009691 cytokinin biosynthetic process;GO:0009934 regulation of meristem structural organization;GO:0010497 plasmodesmata-mediated intercellular transport", "synthesized_glycan_count": 0, "hit_score": 1.4, "record_id": "Q38874-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q38879-1", "uniprot_id": [ { "id": "TRXH2_ARATH", "url": "https://www.uniprot.org/uniprot/Q38879", "type": "external" } ], "mass": 14676.0, "length": 133, "protein_name": "Thioredoxin H2", "gene_name": "TRX2", "organism": "Arabidopsis", "refseq_name": "thioredoxin 2", "refseq_ac": [ { "id": "NP_198811", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_198811", "type": "external" } ], "gene_names_uniprotkb": "TRX2; MYH19.14", "gene_names_refseq": "ATH2; ATTRX2; ATTRXH2; Arabidopsis thioredoxin h2; MYH19.110; MYH19_110; THIOREDOXIN H2; THIOREDOXIN; TRX2; TRXH2; thioredoxin 2", "protein_names_uniprotkb": "Thioredoxin H2; AtTRX2; AtTrxh2; Thioredoxin 2", "protein_names_refseq": "thioredoxin 2", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G39950)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "14593172;14749482;19825616;20133584;27862469;29194485;7777559;8642611;9628582", "class_list": "", "function": "Thiol-disulfide oxidoreductase probably involved in the redox regulation of a number of cytosolic enzymes. Possesses insulin disulfide bonds reducing activity., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q39240", "ec_number_list": [], "go_molecular_function": "GO:0015035 protein-disulfide reductase activity;GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor;GO:0016712 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen", "go_cellular_component": "GO:0005739 mitochondrion;GO:0005829 cytosol;GO:0009507 chloroplast", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "Q38879-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q38890-1", "uniprot_id": [ { "id": "GUN25_ARATH", "url": "https://www.uniprot.org/uniprot/Q38890", "type": "external" } ], "mass": 69191.0, "length": 621, "protein_name": "Endoglucanase 25", "gene_name": "KOR", "organism": "Arabidopsis", "refseq_name": "glycosyl hydrolase 9A1", "refseq_ac": [ { "id": "NP_199783", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_199783", "type": "external" } ], "gene_names_uniprotkb": "KOR; DEC; K2I5.8; KOR1; RSW2", "gene_names_refseq": "ATGH9A1; CELLULASE; DEC; DEFECTIVE CYTOKINESIS; GH9A1; IRREGULAR XYLEM 2; IRX2; K2I5.8; K2I5_8; KOR1; KORRIGAN 1; KORRIGAN; KOR; RADIALLY SWOLLEN 2; RSW2; TSD1; TUMOROUS SHOOT DEVELOPMENT 1; glycosyl hydrolase 9A1", "protein_names_uniprotkb": "Endoglucanase 25; 3.2.1.4; Cellulase homolog OR16pep; Endo-1,4-beta glucanase 25; Protein KORRIGAN; Protein RADIALLY SWOLLEN 2", "protein_names_refseq": "glycosyl hydrolase 9A1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G49720)", "pathway_count": 1, "publication_count": 15, "publication_id_list": "10520455;10899980;11351091;14506206;14593172;14871312;15170254;15308754;16284310;17317660;18408158;21768351;23111157;27862469;9755157", "class_list": "glycogene;glycosylhydrolase", "function": "Required for cellulose microfibril formation. Involved in cell wall assembly during cell elongation and cell plate maturation in cytokinesis. Required for secondary cell wall formation in the developing xylem. May cycle through different intracellular compartments, including plasma membrane., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 9, "predicted_n_glycosites": 8, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 3, "reported_mutagensis": 7, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 9, "binding_glycan_count": 0, "secondary_ac_list": "Q56W54;Q56WU0;Q8H0S4;Q8LD74;Q94C24", "ec_number_list": [], "go_molecular_function": "GO:0008810 cellulase activity", "go_cellular_component": "GO:0005768 endosome;GO:0005769 early endosome;GO:0005794 Golgi apparatus;GO:0005886 plasma membrane;GO:0005802 trans-Golgi network", "go_biological_process": "GO:0042538 hyperosmotic salinity response;GO:0009826 unidimensional cell growth;GO:0043622 cortical microtubule organization;GO:0030244 cellulose biosynthetic process;GO:0071555 cell wall organization", "synthesized_glycan_count": 0, "hit_score": 1.6, "record_id": "Q38890-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000011001.001.10100", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q38893-1", "uniprot_id": [ { "id": "ZDS_ARATH", "url": "https://www.uniprot.org/uniprot/Q38893", "type": "external" } ], "mass": 61634.0, "length": 558, "protein_name": "Zeta-carotene desaturase, chloroplastic/chromoplastic", "gene_name": "ZDS1", "organism": "Arabidopsis", "refseq_name": "zeta-carotene desaturase", "refseq_ac": [ { "id": "NP_001319473", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001319473", "type": "external" } ], "gene_names_uniprotkb": "ZDS1; CLB5; PDE181; SPC1; T9J14.18; ZDS", "gene_names_refseq": "PDE181; PIGMENT DEFECTIVE EMBRYO 181; PRE ZETA-CAROTENE DESATURASE PRECURSOR; SPC1; SPONTANEOUS CELL DEATH 1; T9J14.18; ZDS; zeta-carotene desaturase", "protein_names_uniprotkb": "Zeta-carotene desaturase, chloroplastic/chromoplastic; 1.3.5.6; 9,9'-di-cis-zeta-carotene desaturase; Carotene 7,8-desaturase; Protein CHLOROPLAST BIOGENESIS 5; Protein PIGMENT DEFECTIVE 181; Protein SPONTANEOUS CELL DEATH 1", "protein_names_refseq": "zeta-carotene desaturase", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G04870)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "11130713;14593172;17468780;24907342;27862469;9914519", "class_list": "", "function": "Plays a crucial role in plant growth and development. Is essential for the biosynthesis of carotenoids. Carotenoids are involved in different physiological processes, including coloration, photoprotection, biosynthesis of abscisic acid (ABA) and chloroplast biogenesis (PubMed:17468780, PubMed:24907342). Catalyzes the conversion of zeta-carotene to lycopene via the intermediary of neurosporene. It carries out two consecutive desaturations (introduction of double bonds) at positions C-7 and C-7'. Shows stereoselectivity toward trans C15-C15'zeta-carotene double bond. The zeta-carotene produced by the phytoene desaturase PDS has a C15-C15' double bond in the cis configuration and it requires isomerization before being recognized as substrate by ZDS. The main product is 7,9,7',9'-tetra-cis-lycopene (pro-lycopene) (PubMed:9914519)., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A1I9LPJ6;Q8LD88;Q93YN2;Q9CAV3;Q9LLY1", "ec_number_list": [ { "id": "1.3.5.6", "url": "https://www.rhea-db.org/rhea/?query=ec:1.3.5.6", "type": "external" } ], "go_molecular_function": "GO:0016719 9,9'-di-cis-zeta-carotene desaturase activity", "go_cellular_component": "GO:0009507 chloroplast;GO:0009509 chromoplast;GO:0009941 chloroplast envelope", "go_biological_process": "GO:0016117 carotenoid biosynthetic process;GO:0016120 carotene biosynthetic process;GO:0052889 9,9'-di-cis-zeta-carotene desaturation to 7,9,7',9'-tetra-cis-lycopene;GO:1901177 lycopene biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q38893-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q38895-1", "uniprot_id": [ { "id": "SUP_ARATH", "url": "https://www.uniprot.org/uniprot/Q38895", "type": "external" } ], "mass": 23084.0, "length": 204, "protein_name": "Transcriptional regulator SUPERMAN", "gene_name": "SUP", "organism": "Arabidopsis", "refseq_name": "C2H2 and C2HC zinc fingers superfamily protein", "refseq_ac": [ { "id": "NP_188954", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_188954", "type": "external" } ], "gene_names_uniprotkb": "SUP; FLO10; K14B15.1", "gene_names_refseq": "FLO10; FLORAL DEFECTIVE 10; FLORAL ORGAN NUMBER 1; FON1; SUPERMAN; SUP", "protein_names_uniprotkb": "Transcriptional regulator SUPERMAN", "protein_names_refseq": "C2H2 and C2HC zinc fingers superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G23130)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "10819329;11006335;11898023;11943180;12324589;12616630;1352237;27862469;7477325", "class_list": "", "function": "Probable transcriptional regulator considered as cadastral protein that acts indirectly to prevent the B class homeotic proteins APETALA3 and perhaps PISTILLATA from acting in the gynoecial whorl. Principal function is to balance cell proliferation in the third and fourth whorls of developing flowers thereby maintaining the boundary between stamens and carpels. May fulfill this role by repressing genes implicated in cell division. Plays equally a role in the determinacy of the floral meristem. Is also required for normal ovule development., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "Q4PSN1", "ec_number_list": [], "go_molecular_function": "GO:0003677 DNA binding;GO:0003700 DNA-binding transcription factor activity;GO:0008270 zinc ion binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0030154 cell differentiation;GO:0042127 regulation of cell population proliferation;GO:0045892 negative regulation of DNA-templated transcription;GO:0009755 hormone-mediated signaling pathway", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "Q38895-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q38896-1", "uniprot_id": [ { "id": "CSP4_ARATH", "url": "https://www.uniprot.org/uniprot/Q38896", "type": "external" } ], "mass": 19077.0, "length": 201, "protein_name": "Cold shock domain-containing protein 4", "gene_name": "CSP4", "organism": "Arabidopsis", "refseq_name": "glycine-rich protein 2B", "refseq_ac": [ { "id": "NP_179702", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_179702", "type": "external" } ], "gene_names_uniprotkb": "CSP4; F26H11.18; GRP2B", "gene_names_refseq": "ATCSP4; ATGRP2B; COLD SHOCK DOMAIN PROTEIN 4; F26H11.18; F26H11_18; GLYCINE-RICH PROTEIN 2B; GRP2B; glycine-rich protein 2B", "protein_names_uniprotkb": "Cold shock domain-containing protein 4; AtCSP4; AtGRP2b; Glycine-rich protein 2b", "protein_names_refseq": "glycine-rich protein 2B", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G21060)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "10617197;12529510;14593172;19269998;21282328;22223895;22631563;23328941;27862469", "class_list": "", "function": "Chaperone that binds to and unwinds RNA and both single-stranded DNA and double-stranded DNA (ssDNA and dsDNA DNA) (By similarity). Regulates the flowering transition and flower and seed development, particularly at late stages of embryo development, through regulation of gene expression (including MEA, FIS2, AP1, CAL, AG and SHP2)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q5BIT2", "ec_number_list": [], "go_molecular_function": "GO:0003677 DNA binding;GO:0003729 mRNA binding;GO:0008270 zinc ion binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005730 nucleolus;GO:0005829 cytosol", "go_biological_process": "GO:0009409 response to cold;GO:0009793 embryo development ending in seed dormancy;GO:0010154 fruit development", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "Q38896-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q38897-1", "uniprot_id": [ { "id": "BEL1_ARATH", "url": "https://www.uniprot.org/uniprot/Q38897", "type": "external" } ], "mass": 69493.0, "length": 611, "protein_name": "Homeobox protein BEL1 homolog", "gene_name": "BEL1", "organism": "Arabidopsis", "refseq_name": "POX (plant homeobox) family protein", "refseq_ac": [ { "id": "NP_198957", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_198957", "type": "external" } ], "gene_names_uniprotkb": "BEL1; BELL1; MYC6.12", "gene_names_refseq": "BEL1; BELL 1; MYC6.12; MYC6_12", "protein_names_uniprotkb": "Homeobox protein BEL1 homolog", "protein_names_refseq": "POX (plant homeobox) family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G41410)", "pathway_count": 1, "publication_count": 13, "publication_id_list": "11701881;12244239;14593172;15120075;17693535;17873098;18398054;21768351;22786869;27402171;27862469;8521490;9405937", "class_list": "", "function": "Plays a major role in ovule patterning and in determination of integument identity via its interaction with MADS-box factors. Formation of complex with AG-SEP dimers negatively regulates the carpel identity process and favors the maintenance of ovule identity. BEL1-STM complex maintains the indeterminacy of the inflorescence meristem. Required, with SPL, for cytokinin-induced PIN1 expression in ovules (PubMed:22786869)., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q93Y33;Q9FN59", "ec_number_list": [], "go_molecular_function": "GO:0003700 DNA-binding transcription factor activity;GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005829 cytosol;GO:0009506 plasmodesma", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006357 regulation of transcription by RNA polymerase II;GO:0048481 plant ovule development", "synthesized_glycan_count": 0, "hit_score": 1.4, "record_id": "Q38897-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q38900-1", "uniprot_id": [ { "id": "CP19A_ARATH", "url": "https://www.uniprot.org/uniprot/Q38900", "type": "external" } ], "mass": 18492.0, "length": 173, "protein_name": "Peptidyl-prolyl cis-trans isomerase CYP19-1", "gene_name": "CYP19-1", "organism": "Arabidopsis", "refseq_name": "rotamase CYP 3", "refseq_ac": [ { "id": "NP_001077901", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001077901", "type": "external" } ], "gene_names_uniprotkb": "CYP19-1; ROC3; T24I21.1", "gene_names_refseq": "AtCYP19-1; CYCLOPHILIN; CYP19; ROC3; T24I21.1; T24I21_1; cyclophilin 19; rotamase CYP 3", "protein_names_uniprotkb": "Peptidyl-prolyl cis-trans isomerase CYP19-1; 5.2.1.8; Cyclophilin of 19 kDa 1; PPIase CYP19-1; Rotamase cyclophilin-3", "protein_names_refseq": "rotamase CYP 3", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G16600)", "pathway_count": 1, "publication_count": 11, "publication_id_list": "10617197;14593172;15047905;15051864;16014362;20466843;23572148;24440291;25387881;27862469;9426607", "class_list": "", "function": "PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides. Involved in reactive oxygen species production in response to pathogen infection., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 3, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "F4IL99", "ec_number_list": [ { "id": "5.2.1.8", "url": "https://www.rhea-db.org/rhea/?query=ec:5.2.1.8", "type": "external" }, { "id": "2.3.2.27", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.2.27", "type": "external" } ], "go_molecular_function": "GO:0016018 cyclosporin A binding;GO:0003755 peptidyl-prolyl cis-trans isomerase activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005739 mitochondrion;GO:0005794 Golgi apparatus;GO:0005829 cytosol;GO:0005886 plasma membrane", "go_biological_process": "GO:0007165 signal transduction;GO:0006457 protein folding;GO:0009414 response to water deprivation;GO:0009737 response to abscisic acid", "synthesized_glycan_count": 0, "hit_score": 1.2, "record_id": "Q38900-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q38902-1", "uniprot_id": [ { "id": "RAC1_ARATH", "url": "https://www.uniprot.org/uniprot/Q38902", "type": "external" } ], "mass": 21530.0, "length": 197, "protein_name": "Rac-like GTP-binding protein ARAC1", "gene_name": "ARAC1", "organism": "Arabidopsis", "refseq_name": "RAC-like 1", "refseq_ac": [ { "id": "NP_001077910", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001077910", "type": "external" } ], "gene_names_uniprotkb": "ARAC1; ATGP2; ROP3; T17A5.14", "gene_names_refseq": "ARAC1; ATGP2; ATRAC1; ATROP3; Arabidopsis RAC-like 1; RHO-RELATED GTPASES FROM PLANTS 3; ROP3; T17A5.14; T17A5_14", "protein_names_uniprotkb": "Rac-like GTP-binding protein ARAC1; 3.6.5.2; GTPase protein ROP3", "protein_names_refseq": "RAC-like 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G17800)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "10617197;11102387;14593172;18308939;27862469;8843944;9349271;9765526", "class_list": "", "function": "Inactive GDP-bound Rho GTPases reside in the cytosol, are found in a complex with Rho GDP-dissociation inhibitors (Rho GDIs), and are released from the GDI protein in order to translocate to membranes upon activation., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [ { "id": "3.6.5.2", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.5.2", "type": "external" }, { "id": "3.6.5.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.5.-", "type": "external" }, { "id": "3.6.5.3", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.5.3", "type": "external" }, { "id": "3.6.5.4", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.5.4", "type": "external" }, { "id": "3.6.5.5", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.5.5", "type": "external" }, { "id": "3.6.5.n1", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.5.n1", "type": "external" } ], "go_molecular_function": "GO:0003924 GTPase activity;GO:0005525 GTP binding;GO:0019901 protein kinase binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005819 spindle;GO:0005856 cytoskeleton;GO:0005886 plasma membrane", "go_biological_process": "GO:0007015 actin filament organization;GO:0007165 signal transduction;GO:0032956 regulation of actin cytoskeleton organization;GO:0007264 small GTPase-mediated signal transduction;GO:0008360 regulation of cell shape", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "Q38902-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q38905-1", "uniprot_id": [ { "id": "PRF5_ARATH", "url": "https://www.uniprot.org/uniprot/Q38905", "type": "external" } ], "mass": 14550.0, "length": 134, "protein_name": "Profilin-5", "gene_name": "PRF5", "organism": "Arabidopsis", "refseq_name": "profilin 5", "refseq_ac": [ { "id": "NP_179567", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_179567", "type": "external" } ], "gene_names_uniprotkb": "PRF5; F6F22.20; PFN4; PRF4; PRO4", "gene_names_refseq": "F6F22.20; F6F22_20; PRF5; profilin 5", "protein_names_uniprotkb": "Profilin-5; AtPROF4; AthPRF4", "protein_names_refseq": "profilin 5", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G19770)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "10617197;11977080;16361517;17147637;26433093;27862469;29861135;8685262;8771785", "class_list": "", "function": "Binds to actin monomers and regulates the organization of the actin cytoskeleton (PubMed:29861135). At high concentrations, profilin prevents the polymerization of actin, whereas it enhances it at low concentrations (PubMed:29861135). At low concentrations, associates with the poly-proline motif of formins to enhance actin filament elongation rate (PubMed:29861135). Acts redundantly with PRF4 to regulate apical actin polymerization at the tip of pollen tube and control polarized pollen tube growth (PubMed:26433093). Functions probably by favoring formin-mediated actin polymerization at pollen tube tips (PubMed:26433093)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0MEN1;Q1PF40", "ec_number_list": [], "go_molecular_function": "GO:0003785 actin monomer binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005739 mitochondrion;GO:0005856 cytoskeleton;GO:0005938 cell cortex", "go_biological_process": "GO:0030036 actin cytoskeleton organization", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "Q38905-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q38909-1", "uniprot_id": [ { "id": "XTH28_ARATH", "url": "https://www.uniprot.org/uniprot/Q38909", "type": "external" } ], "mass": 38252.0, "length": 332, "protein_name": "Probable xyloglucan endotransglucosylase/hydrolase protein 28", "gene_name": "XTH28", "organism": "Arabidopsis", "refseq_name": "xyloglucan endotransglucosylase/hydrolase 28", "refseq_ac": [ { "id": "NP_172925", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_172925", "type": "external" } ], "gene_names_uniprotkb": "XTH28; EXGT-A2; F10B6.12; F10B6.29; XTR2", "gene_names_refseq": "ATXTH28; ENDOXYLOGLUCAN TRANSFERASE A2; EXGT-A2; F10B6.12; F10B6_12; XTH28; XTR2; XYLOGLUCAN ENDOTRANSGLYCOSYLASE-RELATED PROTEIN; xyloglucan endotransglucosylase/hydrolase 28; xyloglucan endotransglycosylase related 2", "protein_names_uniprotkb": "Probable xyloglucan endotransglucosylase/hydrolase protein 28; 2.4.1.207; At-XTH28; XTH-28", "protein_names_refseq": "xyloglucan endotransglucosylase/hydrolase 28", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G14720)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "10557219;11130712;12514239;14593172;27862469;8696366", "class_list": "glycogene;glycosylhydrolase", "function": "Catalyzes xyloglucan endohydrolysis (XEH) and/or endotransglycosylation (XET). Cleaves and religates xyloglucan polymers, an essential constituent of the primary cell wall, and thereby participates in cell wall construction of growing tissues (By similarity)., [UniProtKB]", "predicted_glycosites": 1, "predicted_n_glycosites": 1, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "O04750", "ec_number_list": [], "go_molecular_function": "GO:0030247 polysaccharide binding;GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds;GO:0016762 xyloglucan:xyloglucosyl transferase activity", "go_cellular_component": "GO:0005576 extracellular region;GO:0048046 apoplast", "go_biological_process": "GO:0042546 cell wall biogenesis;GO:0071555 cell wall organization;GO:0010154 fruit development;GO:0010411 xyloglucan metabolic process;GO:0080086 stamen filament development", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q38909-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000010000.001.10100", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q38911-1", "uniprot_id": [ { "id": "XTH15_ARATH", "url": "https://www.uniprot.org/uniprot/Q38911", "type": "external" } ], "mass": 32687.0, "length": 289, "protein_name": "Xyloglucan endotransglucosylase/hydrolase protein 15", "gene_name": "XTH15", "organism": "Arabidopsis", "refseq_name": "xyloglucan endotransglucosylase/hydrolase 15", "refseq_ac": [ { "id": "NP_193149", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_193149", "type": "external" } ], "gene_names_uniprotkb": "XTH15; FCAALL.173; XTR7; dl3105c", "gene_names_refseq": "DL3105C; FCAALL.173; XTH15; XTR7; xyloglucan endotransglucosylase/hydrolase 15; xyloglucan endotransglycosylase 7", "protein_names_uniprotkb": "Xyloglucan endotransglucosylase/hydrolase protein 15; 2.4.1.207; 3.2.1.151; At-XTH15; XTH-15", "protein_names_refseq": "xyloglucan endotransglucosylase/hydrolase 15", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G14130)", "pathway_count": 1, "publication_count": 12, "publication_id_list": "10617198;11673616;12514239;14593172;14645728;16830179;21285327;23776189;25446234;27862469;8696366;9461215", "class_list": "glycogene;glycosylhydrolase", "function": "Catalyzes xyloglucan endohydrolysis (XEH) and/or endotransglycosylation (XET). Cleaves and religates xyloglucan polymers, an essential constituent of the primary cell wall, and thereby participates in cell wall construction of growing tissues. Has a high XET activity, but little or no XEH activity in vitro. Acceptor preferences are XXXGol > XLLGol = XLFGol > XXLGol > XXFGol., [UniProtKB, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 1, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "O23272;Q5M726", "ec_number_list": [], "go_molecular_function": "GO:0030247 polysaccharide binding;GO:0016762 xyloglucan:xyloglucosyl transferase activity;GO:0033946 xyloglucan-specific endo-beta-1,4-glucanase activity", "go_cellular_component": "GO:0005576 extracellular region;GO:0009505 plant-type cell wall;GO:0048046 apoplast", "go_biological_process": "GO:0071555 cell wall organization;GO:0009834 plant-type secondary cell wall biogenesis;GO:0010218 response to far red light;GO:0010411 xyloglucan metabolic process", "synthesized_glycan_count": 0, "hit_score": 1.3, "record_id": "Q38911-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000010000.001.10100", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q38913-1", "uniprot_id": [ { "id": "EXTN1_ARATH", "url": "https://www.uniprot.org/uniprot/Q38913", "type": "external" } ], "mass": 41555.0, "length": 373, "protein_name": "Extensin-1", "gene_name": "EXT1", "organism": "Arabidopsis", "refseq_name": "extensin 4", "refseq_ac": [ { "id": "NP_565143", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_565143", "type": "external" } ], "gene_names_uniprotkb": "EXT1; 4; EXT4; F22K20.3", "gene_names_refseq": "ATEXT1; ATEXT4; EXT1; EXT4; EXTENSIN 1; F22K20.3; F22K20_3; OBP3-RESPONSIVE GENE 5; ORG5; extensin 1; extensin 4", "protein_names_uniprotkb": "Extensin-1; AtExt1; AtExt4; Extensin-1/4", "protein_names_refseq": "extensin 4", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G76930)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "10333585;11130712;11475326;20395450;27862469", "class_list": "", "function": "Structural component which strengthens the primary cell wall., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "F4I433;F4I434;Q9FS15;Q9SAW2", "ec_number_list": [], "go_molecular_function": "GO:0005199 structural constituent of cell wall", "go_cellular_component": "GO:0009530 primary cell wall", "go_biological_process": "GO:0009611 response to wounding;GO:0042742 defense response to bacterium;GO:0009751 response to salicylic acid;GO:0009664 plant-type cell wall organization;GO:0009737 response to abscisic acid", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q38913-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q38914-1", "uniprot_id": [ { "id": "ANT_ARATH", "url": "https://www.uniprot.org/uniprot/Q38914", "type": "external" } ], "mass": 61725.0, "length": 555, "protein_name": "AP2-like ethylene-responsive transcription factor ANT", "gene_name": "ANT", "organism": "Arabidopsis", "refseq_name": "Integrase-type DNA-binding superfamily protein", "refseq_ac": [ { "id": "NP_195489", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_195489", "type": "external" } ], "gene_names_uniprotkb": "ANT; CKC1; DRG; OVM; T28I19.30", "gene_names_refseq": "AINTEGUMENTA; ANT; AtANT; CKC1; CKC; COMPLEMENTING A PROTEIN KINASE C MUTANT 1; DRAGON; DRG; T28I19.30; T28I19_30", "protein_names_uniprotkb": "AP2-like ethylene-responsive transcription factor ANT; Complementing a protein kinase C mutant protein 1; Protein AINTEGUMENTA; Protein DRAGON; Protein OVULE MUTANT", "protein_names_refseq": "Integrase-type DNA-binding superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G37750)", "pathway_count": 1, "publication_count": 21, "publication_id_list": "10528263;10617198;10639184;10656774;10948255;11041883;11058102;12183381;12271029;12655002;14593172;15988559;16407444;25564655;27862469;8742706;8742707;9001406;9093862;9118807;9671577", "class_list": "", "function": "Transcription activator that recognizes and binds to the DNA consensus sequence 5'-CAC[AG]N[AT]TNCCNANG-3'. Required for the initiation and growth of ovules integumenta, and for the development of female gametophyte. Plays a critical role in the development of gynoecium marginal tissues (e.g. stigma, style and septa), and in the fusion of carpels and of medial ridges leading to ovule primordia. Also involved in organs initiation and development, including floral organs. Maintains the meristematic competence of cells and consequently sustains expression of cell cycle regulators during organogenesis, thus controlling the final size of each organ by controlling their cell number. Regulates INO autoinduction and expression pattern. As ANT promotes petal cell identity and mediates down-regulation of AG in flower whorl 2, it functions as a class A homeotic gene., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 39, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q42462", "ec_number_list": [], "go_molecular_function": "GO:0003677 DNA binding;GO:0003700 DNA-binding transcription factor activity;GO:0000976 transcription cis-regulatory region binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0030154 cell differentiation;GO:0042127 regulation of cell population proliferation;GO:0051301 cell division;GO:0006355 regulation of DNA-templated transcription", "synthesized_glycan_count": 0, "hit_score": 2.2, "record_id": "Q38914-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q38919-1", "uniprot_id": [ { "id": "RAC4_ARATH", "url": "https://www.uniprot.org/uniprot/Q38919", "type": "external" } ], "mass": 21636.0, "length": 195, "protein_name": "Rac-like GTP-binding protein ARAC4", "gene_name": "ARAC4", "organism": "Arabidopsis", "refseq_name": "RHO-related protein from plants 2", "refseq_ac": [ { "id": "NP_173437", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_173437", "type": "external" } ], "gene_names_uniprotkb": "ARAC4; ROP2; T20H2.12", "gene_names_refseq": "ARAC4; ATRAC4; ATROP2; Arabidopsis RAC-like 4; GTP-BINDING PROTEIN ARAC4; RHO-related protein from plants 2; ROP2; T20H2.12; T20H2_12", "protein_names_uniprotkb": "Rac-like GTP-binding protein ARAC4; 3.6.5.2; AtRAC4; GTPase protein ROP2", "protein_names_refseq": "RHO-related protein from plants 2", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G20090)", "pathway_count": 1, "publication_count": 14, "publication_id_list": "11102387;11130712;11971133;14593172;15294869;17267444;18308939;20832900;27251533;27862469;30770391;31623377;9349271;9765526", "class_list": "", "function": "Inactive GDP-bound Rho GTPases reside in the cytosol, are found in a complex with Rho GDP-dissociation inhibitors (Rho GDIs), and are released from the GDI protein in order to translocate to membranes upon activation (By similarity). Involved in cell polarity control during the actin-dependent tip growth of root hairs, thus regulating root hair length and root hair initiation (PubMed:30770391). Contributes, in a SPK1-dependent manner, to the prevention of cortical microtubules organization into parallel arrays oriented perpendicular to the axis of cell elongation to limit anisotropic cell growth during petal development (PubMed:31623377). May regulate a WAVE complex that activates the Arp2/3 complex., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [ { "id": "3.6.5.2", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.5.2", "type": "external" }, { "id": "3.6.5.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.5.-", "type": "external" }, { "id": "3.6.5.3", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.5.3", "type": "external" }, { "id": "3.6.5.4", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.5.4", "type": "external" }, { "id": "3.6.5.5", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.5.5", "type": "external" }, { "id": "3.6.5.n1", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.5.n1", "type": "external" } ], "go_molecular_function": "GO:0003924 GTPase activity;GO:0005525 GTP binding;GO:0019901 protein kinase binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005730 nucleolus;GO:0005737 cytoplasm;GO:0005856 cytoskeleton;GO:0005886 plasma membrane", "go_biological_process": "GO:0007015 actin filament organization;GO:0007165 signal transduction;GO:0032956 regulation of actin cytoskeleton organization;GO:0000902 cell morphogenesis;GO:0007264 small GTPase-mediated signal transduction", "synthesized_glycan_count": 0, "hit_score": 1.5, "record_id": "Q38919-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q38929-1", "uniprot_id": [ { "id": "IDI1_ARATH", "url": "https://www.uniprot.org/uniprot/Q38929", "type": "external" } ], "mass": 33214.0, "length": 291, "protein_name": "Isopentenyl-diphosphate Delta-isomerase I, chloroplastic", "gene_name": "IPP1", "organism": "Arabidopsis", "refseq_name": "isopentenyl diphosphate isomerase 1", "refseq_ac": [ { "id": "NP_197148", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_197148", "type": "external" } ], "gene_names_uniprotkb": "IPP1; IPI1; MQK4.17", "gene_names_refseq": "IPP1; ISOPENTENYL DIPHOSPHATE ISOMERASE; MQK4.17; MQK4_17; isopentenyl diphosphate isomerase 1", "protein_names_uniprotkb": "Isopentenyl-diphosphate Delta-isomerase I, chloroplastic; 5.3.3.2; IPP isomerase I; Isopentenyl pyrophosphate isomerase I", "protein_names_refseq": "isopentenyl diphosphate isomerase 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G16440)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "14593172;22060019;22223895;27862469;9330910;9484444", "class_list": "", "function": "Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP)., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q42552;Q9FFE1", "ec_number_list": [ { "id": "5.3.3.2", "url": "https://www.rhea-db.org/rhea/?query=ec:5.3.3.2", "type": "external" } ], "go_molecular_function": "GO:0004452 isopentenyl-diphosphate delta-isomerase activity;GO:0046872 metal ion binding", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005829 cytosol;GO:0009507 chloroplast;GO:0009536 plastid", "go_biological_process": "GO:0009240 isopentenyl diphosphate biosynthetic process;GO:0050992 dimethylallyl diphosphate biosynthetic process;GO:0008299 isoprenoid biosynthetic process;GO:0015979 photosynthesis;GO:0015995 chlorophyll biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q38929-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q38932-1", "uniprot_id": [ { "id": "LCYE_ARATH", "url": "https://www.uniprot.org/uniprot/Q38932", "type": "external" } ], "mass": 58491.0, "length": 524, "protein_name": "Lycopene epsilon cyclase, chloroplastic", "gene_name": "LUT2", "organism": "Arabidopsis", "refseq_name": "Lycopene beta/epsilon cyclase protein", "refseq_ac": [ { "id": "NP_200513", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_200513", "type": "external" } ], "gene_names_uniprotkb": "LUT2; MHM17.16", "gene_names_refseq": "LUT2; LUTEIN DEFICIENT 2; LYCOPENE EPSILON-CYCLASE", "protein_names_uniprotkb": "Lycopene epsilon cyclase, chloroplastic; 5.5.1.18; Protein LUTEIN DEFICIENT 2", "protein_names_refseq": "Lycopene beta/epsilon cyclase protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G57030)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "10718197;11226339;14593172;27862469;8837512;9789087", "class_list": "", "function": "Involved in carotenoid biosynthesis. Catalyzes the single epsilon-cyclization reaction which converts lycopene to delta-carotene and neurosporene to alpha-zeacarotene (PubMed:11226339, PubMed:8837512). Required for lutein biosynthesis (PubMed:9789087)., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 5, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9LDV8", "ec_number_list": [ { "id": "5.5.1.18", "url": "https://www.rhea-db.org/rhea/?query=ec:5.5.1.18", "type": "external" } ], "go_molecular_function": "GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen;GO:0045435 lycopene epsilon cyclase activity", "go_cellular_component": "GO:0009507 chloroplast;GO:0031969 chloroplast membrane", "go_biological_process": "GO:0016117 carotenoid biosynthetic process;GO:0016123 xanthophyll biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q38932-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q38937-1", "uniprot_id": [ { "id": "RAC5_ARATH", "url": "https://www.uniprot.org/uniprot/Q38937", "type": "external" } ], "mass": 21777.0, "length": 196, "protein_name": "Rac-like GTP-binding protein ARAC5", "gene_name": "ARAC5", "organism": "Arabidopsis", "refseq_name": "RAC-like GTP binding protein 5", "refseq_ac": [ { "id": "NP_177712", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_177712", "type": "external" } ], "gene_names_uniprotkb": "ARAC5; ATGP3; ROP4; T4O12.8", "gene_names_refseq": "ARABIDOPSIS THALIANA GERANYLGERANYLATED PROTEIN 3; ARAC5; ATGP3; ATROP4; RAC-LIKE GTP BINDING PROTEIN; RAC-like GTP binding protein 5; RHO-LIKE GTP BINDING PROTEIN 4; ROP4", "protein_names_uniprotkb": "Rac-like GTP-binding protein ARAC5; 3.6.5.2; AtRAC5; GTPase protein ROP4", "protein_names_refseq": "RAC-like GTP binding protein 5", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G75840)", "pathway_count": 1, "publication_count": 13, "publication_id_list": "10798620;11102387;11130712;11387211;14593172;17218277;18308939;19335195;27862469;30770391;8843944;9349271;9765526", "class_list": "", "function": "Inactive GDP-bound Rho GTPases reside in the cytosol, are found in a complex with Rho GDP-dissociation inhibitors (Rho GDIs), and are released from the GDI protein in order to translocate to membranes upon activation., [UniProtKB, PubMed]; Involved in cell polarity control during the actin-dependent tip growth of root hairs, thus regulating root hair length and root hair initiation., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O48545;Q9LQT0;Q9ZRD5", "ec_number_list": [ { "id": "3.6.5.2", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.5.2", "type": "external" }, { "id": "3.6.5.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.5.-", "type": "external" }, { "id": "3.6.5.3", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.5.3", "type": "external" }, { "id": "3.6.5.4", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.5.4", "type": "external" }, { "id": "3.6.5.5", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.5.5", "type": "external" }, { "id": "3.6.5.n1", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.5.n1", "type": "external" } ], "go_molecular_function": "GO:0003924 GTPase activity;GO:0005525 GTP binding;GO:0019901 protein kinase binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005730 nucleolus;GO:0005737 cytoplasm;GO:0005739 mitochondrion;GO:0005856 cytoskeleton", "go_biological_process": "GO:0007015 actin filament organization;GO:0007165 signal transduction;GO:0032956 regulation of actin cytoskeleton organization;GO:0007264 small GTPase-mediated signal transduction;GO:0008360 regulation of cell shape", "synthesized_glycan_count": 0, "hit_score": 1.4, "record_id": "Q38937-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q38944-1", "uniprot_id": [ { "id": "DET2_ARATH", "url": "https://www.uniprot.org/uniprot/Q38944", "type": "external" } ], "mass": 30635.0, "length": 262, "protein_name": "Steroid 5-alpha-reductase DET2", "gene_name": "DET2", "organism": "Arabidopsis", "refseq_name": "3-oxo-5-alpha-steroid 4-dehydrogenase family protein", "refseq_ac": [ { "id": "NP_181340", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_181340", "type": "external" } ], "gene_names_uniprotkb": "DET2; CRO1; T8P21.4", "gene_names_refseq": "ATDET2; DE-ETIOLATED 2; DET2; DWARF 6; DWF6; STEROID REDUCTASE DET2; T8P21.4; T8P21_4", "protein_names_uniprotkb": "Steroid 5-alpha-reductase DET2; (22R,23R)-22,23-dihydroxycampest-4-en-3-one synthase; (22S,24R)-22-hydroxy-5alpha-ergostan-3-one synthase; 1.3.1.-; 1.3.1.22; AtDET2; Campest-3-one synthase; Protein COMPACT ROSETTE 1; Protein DEETIOLATED 2", "protein_names_refseq": "3-oxo-5-alpha-steroid 4-dehydrogenase family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G38050)", "pathway_count": 1, "publication_count": 13, "publication_id_list": "10394910;10398719;10617197;11161033;11867704;14593172;15993049;22822057;23771896;27862469;8602526;9108014;9401120", "class_list": "", "function": "Involved in a reduction step in the biosynthesis of the plant steroid, brassinolide (BL); acts at the second step in brassinolide biosynthesis in the 5alpha-reduction of (24R)- 24-methylcholest-4-en-3-one, which is further modified to form campestanol. Can use progesterone, testosterone, androstenedione and campestenone as substrate. Also catalyzes the conversion of campest-4-en-3-one (campesta-4-en-3-one, 4-en-3-one) to campest-3-one (campesta-3-one, 3-one), of (22S,24R)-22-hydroxyergost-4-en-3-one (22-hydroxy-campesta-4-en-3-one, 22-OH-4-en-3-one) to (22S,24R)-22-hydroxy-5alpha-ergostan-3-one (22-hydroxy-campesta-3-one, 22-OH-3-one), and of (22R,23R)-22,23-dihydroxy-5alpha-campestan-3-one (22,23,diOH-4-en-3-one) to (22R,23R)-22,23-dihydroxycampest-4-en-3-one (6-deoxo3DT) (PubMed:22822057). Required for the brassinosteroid- (BR) dependent regulation of seed size and shape as well as embryo development (PubMed:23771896)., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "Q9SH83", "ec_number_list": [ { "id": "1.3.1.-", "url": "https://www.rhea-db.org/rhea/?query=ec:1.3.1.-", "type": "external" }, { "id": "1.3.1.22", "url": "https://www.rhea-db.org/rhea/?query=ec:1.3.1.22", "type": "external" } ], "go_molecular_function": "GO:0016491 oxidoreductase activity;GO:0047751 3-oxo-5-alpha-steroid 4-dehydrogenase (NADP+) activity", "go_cellular_component": "GO:0016020 membrane", "go_biological_process": "GO:0016132 brassinosteroid biosynthetic process;GO:0009416 response to light stimulus;GO:0010268 brassinosteroid homeostasis", "synthesized_glycan_count": 0, "hit_score": 1.4, "record_id": "Q38944-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q38954-1", "uniprot_id": [ { "id": "PHT21_ARATH", "url": "https://www.uniprot.org/uniprot/Q38954", "type": "external" } ], "mass": 61419.0, "length": 587, "protein_name": "Inorganic phosphate transporter 2-1, chloroplastic", "gene_name": "PHT2-1", "organism": "Arabidopsis", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "PHT2-1; MFE16.10; PHT2", "gene_names_refseq": "", "protein_names_uniprotkb": "Inorganic phosphate transporter 2-1, chloroplastic; 1; AtPht2; H(+)/Pi cotransporter", "protein_names_refseq": "", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G26570)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "10559441;10819329;12172020;15200639;27862469;8932388", "class_list": "", "function": "Low affinity H(+)/Pi chloroplastic cotransporter. Involved in inorganic phosphate (orthophosphate, Pi) uptake in green parts of plants in Pi-sufficient conditions. Required for Pi retranslocation during Pi deprivation., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q3EAZ6", "ec_number_list": [], "go_molecular_function": "GO:0015293 symporter activity;GO:0005315 phosphate transmembrane transporter activity;GO:0009673 low-affinity phosphate transmembrane transporter activity", "go_cellular_component": "GO:0005829 cytosol;GO:0009507 chloroplast;GO:0009706 chloroplast inner membrane;GO:0009941 chloroplast envelope", "go_biological_process": "GO:0006817 phosphate ion transport;GO:0035435 phosphate ion transmembrane transport", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q38954-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q38970-1", "uniprot_id": [ { "id": "ACC1_ARATH", "url": "https://www.uniprot.org/uniprot/Q38970", "type": "external" } ], "mass": 251382.0, "length": 2254, "protein_name": "Acetyl-CoA carboxylase 1", "gene_name": "ACC1", "organism": "Arabidopsis", "refseq_name": "acetyl-CoA carboxylase 1", "refseq_ac": [ { "id": "NP_001185143", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001185143", "type": "external" } ], "gene_names_uniprotkb": "ACC1; EMB22; F15C21.1; GK; PAS3", "gene_names_refseq": "ACC1; AT-ACC1; EMB22; EMBRYO DEFECTIVE 22; GK; GLOSSYHEAD 1; GSD1; GURKE; PAS3; PASTICCINO 3; SENSITIVE TO FREEZING 3; SFR3; acetyl-CoA carboxylase 1", "protein_names_uniprotkb": "Acetyl-CoA carboxylase 1; 6.4.1.2; AtACC1; Protein EMBRYO DEFECTIVE 22; Protein GURKE; Protein PASTICCINO 3", "protein_names_refseq": "acetyl-CoA carboxylase 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G36160)", "pathway_count": 1, "publication_count": 18, "publication_id_list": "11130712;12376641;12943542;15088065;15509834;19376835;20145257;23473981;23572148;23776212;25561503;26091701;27862469;7551584;7915036;9008389;9011083;9449673", "class_list": "", "function": "Multifunctional enzyme that catalyzes the carboxylation of acetyl-CoA, forming malonyl-CoA, which is used in the plastid for fatty acid synthesis and in the cytosol in various biosynthetic pathways including fatty acid elongation. Required for very long chain fatty acids elongation. Necessary for embryo and plant development. Plays a central function in embryo morphogenesis, especially in apical meristem development. Involved in cell proliferation and tissue patterning. May act as a repressor of cytokinin response., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 3, "reported_mutagensis": 2, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q0WNF3;Q38971;Q9C8G1;Q9SKV1", "ec_number_list": [ { "id": "6.3.4.14", "url": "https://www.rhea-db.org/rhea/?query=ec:6.3.4.14", "type": "external" }, { "id": "6.4.1.2", "url": "https://www.rhea-db.org/rhea/?query=ec:6.4.1.2", "type": "external" } ], "go_molecular_function": "GO:0005524 ATP binding;GO:0046872 metal ion binding;GO:0003989 acetyl-CoA carboxylase activity;GO:0004075 biotin carboxylase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005829 cytosol", "go_biological_process": "GO:0006633 fatty acid biosynthetic process;GO:2001295 malonyl-CoA biosynthetic process;GO:0030497 fatty acid elongation;GO:0009735 response to cytokinin;GO:0009793 embryo development ending in seed dormancy", "synthesized_glycan_count": 0, "hit_score": 1.9, "record_id": "Q38970-1", "record_type": "protein", "filter_code": "0000000.0100101.010000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q39010-1", "uniprot_id": [ { "id": "KSG6_ARATH", "url": "https://www.uniprot.org/uniprot/Q39010", "type": "external" } ], "mass": 46455.0, "length": 412, "protein_name": "Shaggy-related protein kinase zeta", "gene_name": "ASK6", "organism": "Arabidopsis", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "ASK6; F7F1.19; SK2-2; SK23", "gene_names_refseq": "", "protein_names_uniprotkb": "Shaggy-related protein kinase zeta; 2.7.11.1; ASK-zeta; AtSK2-2; AtSK23; Shaggy-related protein kinase 2-2; Shaggy-related protein kinase 23", "protein_names_refseq": "", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G30980)", "pathway_count": 1, "publication_count": 17, "publication_id_list": "10617197;14593172;20466843;22074104;23111157;23328941;23572148;23776212;25561503;26091701;27532006;27862469;28011693;28575660;29167316;30833711;9611268", "class_list": "", "function": "May mediate extracellular signals to regulate transcription in differentiating cells., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 11, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O80862;Q541C5;Q8LAX6", "ec_number_list": [ { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.3.2.27", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.2.27", "type": "external" }, { "id": "2.7.10.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.-", "type": "external" }, { "id": "3.1.4.46", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.4.46", "type": "external" }, { "id": "2.7.11.25", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.25", "type": "external" }, { "id": "2.7.11.22", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.22", "type": "external" }, { "id": "2.7.10.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.1", "type": "external" }, { "id": "2.7.11.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.-", "type": "external" }, { "id": "2.7.11.24", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.24", "type": "external" }, { "id": "2.7.12.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.1", "type": "external" }, { "id": "2.7.11.23", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.23", "type": "external" }, { "id": "2.7.12.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.2", "type": "external" }, { "id": "2.7.-.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.-.-", "type": "external" }, { "id": "3.1.26.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.26.-", "type": "external" }, { "id": "3.1.3.16", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.16", "type": "external" }, { "id": "2.7.11.34", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.34", "type": "external" }, { "id": "4.6.1.2", "url": "https://www.rhea-db.org/rhea/?query=ec:4.6.1.2", "type": "external" } ], "go_molecular_function": "GO:0004674 protein serine/threonine kinase activity;GO:0005524 ATP binding;GO:0106310 protein serine kinase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0009507 chloroplast", "go_biological_process": "GO:0006468 protein phosphorylation;GO:0030154 cell differentiation;GO:0032880 regulation of protein localization;GO:0009414 response to water deprivation;GO:0009416 response to light stimulus", "synthesized_glycan_count": 0, "hit_score": 1.8, "record_id": "Q39010-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q39012-1", "uniprot_id": [ { "id": "KSG9_ARATH", "url": "https://www.uniprot.org/uniprot/Q39012", "type": "external" } ], "mass": 46024.0, "length": 407, "protein_name": "Shaggy-related protein kinase iota", "gene_name": "ASK9", "organism": "Arabidopsis", "refseq_name": "GSK3/SHAGGY-like protein kinase 1", "refseq_ac": [ { "id": "NP_172127", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_172127", "type": "external" } ], "gene_names_uniprotkb": "ASK9; BIL2; GSK1; SK2-3; SK22; T2D23.9", "gene_names_refseq": "A. THALIANA SHAGGY-LIKE KINASE GROUP 2 3; ATGSK1; ATSK2-3; ATSK22; BIL2; BIN2-LIKE 2; GSK1; GSK3/SHAGGY-LIKE PROTEIN KINASE; GSK3/SHAGGY-like protein kinase 1; SHAGGY-LIKE PROTEIN KINASE 22; SK22; T2D23.9; T2D23_9", "protein_names_uniprotkb": "Shaggy-related protein kinase iota; 2.7.11.1; ASK-iota; AtGSK1; AtSK2-3; AtSK22; GSK3/shaggy-related protein kinase 1; Protein BIN2-like 2; Shaggy-related protein kinase 2-3; Shaggy-related protein kinase 22", "protein_names_refseq": "GSK3/SHAGGY-like protein kinase 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G06390)", "pathway_count": 1, "publication_count": 20, "publication_id_list": "11130712;14593172;20466843;22074104;23111157;23328941;23496207;23572148;23660473;23776212;24601666;25561503;26091701;26187819;27532006;27862469;28011693;28575660;29167316;30833711", "class_list": "", "function": "Phosphorylates BSK1, BSK3, BSK5, BSK6, BSK8 and BSK11 in vitro (PubMed:23496207). May mediate extracellular signals to regulate transcription in differentiating cells (By similarity)., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 3, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [ { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.3.2.27", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.2.27", "type": "external" }, { "id": "2.7.10.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.-", "type": "external" }, { "id": "3.1.4.46", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.4.46", "type": "external" }, { "id": "2.7.11.25", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.25", "type": "external" }, { "id": "2.7.11.22", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.22", "type": "external" }, { "id": "2.7.10.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.1", "type": "external" }, { "id": "2.7.11.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.-", "type": "external" }, { "id": "2.7.11.24", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.24", "type": "external" }, { "id": "2.7.12.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.1", "type": "external" }, { "id": "2.7.11.23", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.23", "type": "external" }, { "id": "2.7.12.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.2", "type": "external" }, { "id": "2.7.-.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.-.-", "type": "external" }, { "id": "3.1.26.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.26.-", "type": "external" }, { "id": "3.1.3.16", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.16", "type": "external" }, { "id": "2.7.11.34", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.34", "type": "external" }, { "id": "4.6.1.2", "url": "https://www.rhea-db.org/rhea/?query=ec:4.6.1.2", "type": "external" } ], "go_molecular_function": "GO:0004674 protein serine/threonine kinase activity;GO:0005524 ATP binding;GO:0106310 protein serine kinase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm", "go_biological_process": "GO:0006468 protein phosphorylation;GO:0030154 cell differentiation;GO:0032880 regulation of protein localization;GO:0046777 protein autophosphorylation;GO:0009414 response to water deprivation", "synthesized_glycan_count": 0, "hit_score": 2.1, "record_id": "Q39012-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q39027-1", "uniprot_id": [ { "id": "MPK7_ARATH", "url": "https://www.uniprot.org/uniprot/Q39027", "type": "external" } ], "mass": 42299.0, "length": 368, "protein_name": "Mitogen-activated protein kinase 7", "gene_name": "MPK7", "organism": "Arabidopsis", "refseq_name": "MAP kinase 7", "refseq_ac": [ { "id": "NP_179409", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_179409", "type": "external" } ], "gene_names_uniprotkb": "MPK7; F8D23", "gene_names_refseq": "ATMPK7; F8D23.5; F8D23_5; MAP kinase 7; MPK7", "protein_names_uniprotkb": "Mitogen-activated protein kinase 7; 2.7.11.24; AtMPK7; MAP kinase 7", "protein_names_refseq": "MAP kinase 7", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G18170)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "10617197;16537113;17933903;19513235;22074104;25680457;25720833;27862469;29654922;8282107", "class_list": "", "function": "MKK3-MPK7 module acts as a positive regulator of PR1 gene expression., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 3, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q56W33;Q9SI14", "ec_number_list": [ { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.3.2.27", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.2.27", "type": "external" }, { "id": "2.7.10.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.-", "type": "external" }, { "id": "3.1.4.46", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.4.46", "type": "external" }, { "id": "2.7.11.25", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.25", "type": "external" }, { "id": "2.7.11.22", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.22", "type": "external" }, { "id": "2.7.10.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.1", "type": "external" }, { "id": "2.7.11.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.-", "type": "external" }, { "id": "2.7.11.24", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.24", "type": "external" }, { "id": "2.7.12.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.1", "type": "external" }, { "id": "2.7.11.23", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.23", "type": "external" }, { "id": "2.7.12.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.2", "type": "external" }, { "id": "2.7.-.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.-.-", "type": "external" }, { "id": "3.1.26.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.26.-", "type": "external" }, { "id": "3.1.3.16", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.16", "type": "external" }, { "id": "2.7.11.34", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.34", "type": "external" }, { "id": "4.6.1.2", "url": "https://www.rhea-db.org/rhea/?query=ec:4.6.1.2", "type": "external" } ], "go_molecular_function": "GO:0004674 protein serine/threonine kinase activity;GO:0005524 ATP binding;GO:0004707 MAP kinase activity;GO:0106310 protein serine kinase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm", "go_biological_process": "GO:0006952 defense response;GO:0007165 signal transduction;GO:0035556 intracellular signal transduction;GO:0042542 response to hydrogen peroxide;GO:0007623 circadian rhythm", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "Q39027-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q39030-1", "uniprot_id": [ { "id": "KPK2_ARATH", "url": "https://www.uniprot.org/uniprot/Q39030", "type": "external" } ], "mass": 53037.0, "length": 471, "protein_name": "Serine/threonine-protein kinase AtPK2/AtPK19", "gene_name": "ATPK2", "organism": "Arabidopsis", "refseq_name": "serine/threonine protein kinase 2", "refseq_ac": [ { "id": "NP_001327294", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001327294", "type": "external" } ], "gene_names_uniprotkb": "ATPK2; ATPK19; F17O14.19; S6K2", "gene_names_refseq": "ARABIDOPSIS THALIANA PROTEIN KINASE 2; ARABIDOPSIS THALIANA SERINE/THREONINE PROTEIN KINASE 2; ATPK19; ATPK2; ATS6K2; Arabidopsis thaliana protein kinase 19; S6K2; serine/threonine protein kinase 2", "protein_names_uniprotkb": "Serine/threonine-protein kinase AtPK2/AtPK19; 2.7.11.1; Ribosomal-protein S6 kinase homolog 2", "protein_names_refseq": "serine/threonine protein kinase 2", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G08720)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "11130713;13678909;14593172;16125835;19423640;22134914;25399018;27862469;29084871;7828736", "class_list": "", "function": "Downstream effector of TOR signaling pathway. May be involved in adaptation of plant to cold or high-salt conditions. Mediates the phosphorylation of MRFs (e.g. MRF1) (PubMed:29084871)., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q0V851;Q949X5;Q9C5R1", "ec_number_list": [ { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.3.2.27", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.2.27", "type": "external" }, { "id": "2.7.10.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.-", "type": "external" }, { "id": "3.1.4.46", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.4.46", "type": "external" }, { "id": "2.7.11.25", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.25", "type": "external" }, { "id": "2.7.11.22", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.22", "type": "external" }, { "id": "2.7.10.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.1", "type": "external" }, { "id": "2.7.11.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.-", "type": "external" }, { "id": "2.7.11.24", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.24", "type": "external" }, { "id": "2.7.12.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.1", "type": "external" }, { "id": "2.7.11.23", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.23", "type": "external" }, { "id": "2.7.12.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.2", "type": "external" }, { "id": "2.7.-.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.-.-", "type": "external" }, { "id": "3.1.26.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.26.-", "type": "external" }, { "id": "3.1.3.16", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.16", "type": "external" }, { "id": "2.7.11.34", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.34", "type": "external" }, { "id": "4.6.1.2", "url": "https://www.rhea-db.org/rhea/?query=ec:4.6.1.2", "type": "external" } ], "go_molecular_function": "GO:0004672 protein kinase activity;GO:0004674 protein serine/threonine kinase activity;GO:0005524 ATP binding;GO:0016301 kinase activity;GO:0106310 protein serine kinase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm", "go_biological_process": "GO:0006468 protein phosphorylation;GO:0009409 response to cold;GO:0071456 cellular response to hypoxia;GO:0009651 response to salt stress;GO:0045727 positive regulation of translation", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "Q39030-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q39032-1", "uniprot_id": [ { "id": "PLCD1_ARATH", "url": "https://www.uniprot.org/uniprot/Q39032", "type": "external" } ], "mass": 64314.0, "length": 561, "protein_name": "Phosphoinositide phospholipase C 1", "gene_name": "PLC1", "organism": "Arabidopsis", "refseq_name": "phospholipase C1", "refseq_ac": [ { "id": "NP_568881", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_568881", "type": "external" } ], "gene_names_uniprotkb": "PLC1; ATHATPLC1G; MZN1.12", "gene_names_refseq": "ARABIDOPSIS THALIANA PHOSPHOLIPASE C; ATPLC1; ATPLC; MZN1.12; MZN1_12; PHOSPHOLIPASE C; PLC1; phospholipase C 1; phospholipase C1", "protein_names_uniprotkb": "Phosphoinositide phospholipase C 1; 3.1.4.11; AtPLC1S; AtPLC1; PI-PLC1; Phosphoinositide phospholipase PLC1", "protein_names_refseq": "phospholipase C1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G58670)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "10718197;11340187;12226484;18686298;25561503;27862469;7732004;9427559", "class_list": "", "function": "The production of the second messenger molecules diacylglycerol (DAG) and inositol 1,4,5-trisphosphate (IP3) is mediated by activated phosphatidylinositol-specific phospholipase C enzymes. Required for secondary responses to abscisic acid signals., [UniProtKB, PubMed, UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O49970", "ec_number_list": [ { "id": "3.1.4.11", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.4.11", "type": "external" } ], "go_molecular_function": "GO:0004435 phosphatidylinositol-4,5-bisphosphate phospholipase C activity;GO:0046872 metal ion binding;GO:0004629 phospholipase C activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005886 plasma membrane", "go_biological_process": "GO:0009409 response to cold;GO:0016042 lipid catabolic process;GO:0051209 release of sequestered calcium ion into cytosol;GO:0009651 response to salt stress;GO:0048015 phosphatidylinositol-mediated signaling", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "Q39032-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q39034-1", "uniprot_id": [ { "id": "PER59_ARATH", "url": "https://www.uniprot.org/uniprot/Q39034", "type": "external" } ], "mass": 35023.0, "length": 328, "protein_name": "Peroxidase 59", "gene_name": "PER59", "organism": "Arabidopsis", "refseq_name": "Peroxidase superfamily protein", "refseq_ac": [ { "id": "NP_568385", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_568385", "type": "external" } ], "gene_names_uniprotkb": "PER59; F28I16.40; P59", "gene_names_refseq": "F28I16.40; F28I16_40", "protein_names_uniprotkb": "Peroxidase 59; 1.11.1.7; ATPN; Atperox P59; Peroxidase N", "protein_names_refseq": "Peroxidase superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G19890)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "10713531;11130714;12034502;14593172;27862469;9738941", "class_list": "", "function": "Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress. These functions might be dependent on each isozyme/isoform in each plant tissue., [UniProtKB]", "predicted_glycosites": 5, "predicted_n_glycosites": 5, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 5, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [ { "id": "1.11.1.7", "url": "https://www.rhea-db.org/rhea/?query=ec:1.11.1.7", "type": "external" }, { "id": "3.1.3.2", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.2", "type": "external" } ], "go_molecular_function": "GO:0046872 metal ion binding;GO:0020037 heme binding;GO:0004601 peroxidase activity;GO:0140825 lactoperoxidase activity", "go_cellular_component": "GO:0005576 extracellular region;GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0009505 plant-type cell wall", "go_biological_process": "GO:0006979 response to oxidative stress;GO:0042744 hydrogen peroxide catabolic process", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q39034-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000010000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q39041-1", "uniprot_id": [ { "id": "INVA4_ARATH", "url": "https://www.uniprot.org/uniprot/Q39041", "type": "external" } ], "mass": 73844.0, "length": 664, "protein_name": "Acid beta-fructofuranosidase 4, vacuolar", "gene_name": "BFRUCT4", "organism": "Arabidopsis", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "BFRUCT4; BETAFRUCT4; T28K15.3", "gene_names_refseq": "", "protein_names_uniprotkb": "Acid beta-fructofuranosidase 4, vacuolar; 3.2.1.26; AI 4; Acid invertase 4; Acid sucrose hydrolase 4; At beta fruct4; AtBETAFRUCT4; Inv-V4; VAC-INV 4; VI 4; Vacuolar invertase 4", "protein_names_refseq": "", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G12240)", "pathway_count": 1, "publication_count": 14, "publication_id_list": "11130712;11910074;12773619;14593172;14871666;15056893;16481625;16807755;20207708;21899678;22060019;23737500;27862469;9332372", "class_list": "glycogene;glycosylhydrolase", "function": "Possible role in the continued mobilization of sucrose to sink organs (PubMed:20207708). Regulates root elongation (PubMed:16481625)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 4, "predicted_n_glycosites": 4, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 19, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 4, "binding_glycan_count": 0, "secondary_ac_list": "Q7DLW9;Q8GX36", "ec_number_list": [], "go_molecular_function": "GO:0004564 beta-fructofuranosidase activity", "go_cellular_component": "GO:0000139 Golgi membrane;GO:0016020 membrane;GO:0005789 endoplasmic reticulum membrane;GO:0005774 vacuolar membrane;GO:0005773 vacuole", "go_biological_process": "GO:0009617 response to bacterium;GO:0005985 sucrose metabolic process;GO:0009738 abscisic acid-activated signaling pathway;GO:0071370 cellular response to gibberellin stimulus;GO:0080022 primary root development", "synthesized_glycan_count": 0, "hit_score": 1.5, "record_id": "Q39041-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000010001.001.10100", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q39044-1", "uniprot_id": [ { "id": "VPEB_ARATH", "url": "https://www.uniprot.org/uniprot/Q39044", "type": "external" } ], "mass": 53828.0, "length": 486, "protein_name": "Vacuolar-processing enzyme beta-isozyme", "gene_name": "bVPE", "organism": "Arabidopsis", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "bVPE; F23N19.7", "gene_names_refseq": "", "protein_names_uniprotkb": "Vacuolar-processing enzyme beta-isozyme; 3.4.22.34; Asparaginyl endopeptidase beta-VPE; Beta-VPE", "protein_names_refseq": "", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G62710)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "10417725;11130712;12417707;14593172;14688293;27862469;7579169", "class_list": "", "function": "Asparagine-specific endopeptidase involved in the processing of vacuolar seed protein precursors into the mature forms (By similarity). Probably involved in post-translational proteolysis of seed storage proteins in the protein storage vacuole of developing seeds (PubMed:12417707, PubMed:14688293)., [UniProtKB, PubMed, UniProtKB, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 1, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "Q93VS7;Q9SI79", "ec_number_list": [], "go_molecular_function": "GO:0004197 cysteine-type endopeptidase activity", "go_cellular_component": "GO:0000326 protein storage vacuole", "go_biological_process": "GO:0051603 proteolysis involved in protein catabolic process;GO:0006624 vacuolar protein processing", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q39044-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000010000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q39085-1", "uniprot_id": [ { "id": "DIM_ARATH", "url": "https://www.uniprot.org/uniprot/Q39085", "type": "external" } ], "mass": 65394.0, "length": 561, "protein_name": "Delta(24)-sterol reductase", "gene_name": "DIM", "organism": "Arabidopsis", "refseq_name": "cell elongation protein / DWARF1 / DIMINUTO (DIM)", "refseq_ac": [ { "id": "NP_001319595", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001319595", "type": "external" } ], "gene_names_uniprotkb": "DIM; CBB1; DWF1; EVE1; MPN9.6", "gene_names_refseq": "CABBAGE 1; CBB1; DIM1; DIMINUTIA; DIMINUTO 1; DIM; DWARF 1; DWF1; ENHANCED VERY-LOW-FLUENCE RESPONSES 1; EVE1", "protein_names_uniprotkb": "Delta(24)-sterol reductase; 1.3.1.72; Cell elongation protein DIMINUTO; Cell elongation protein Dwarf1; Protein CABBAGE1; Protein ENHANCED VERY-LOW-FLUENCE RESPONSE 1", "protein_names_refseq": "cell elongation protein / DWARF1 / DIMINUTO (DIM)", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G19820)", "pathway_count": 1, "publication_count": 17, "publication_id_list": "10069828;10819329;11788763;14593172;16193053;18463617;19376835;20466843;21768351;24043427;25561503;26091701;27419465;27532006;27862469;7828854;9761794", "class_list": "", "function": "Plays a critical role in the general process of plant cell elongation. Involved in the synthesis of campesterol, an early precursor of brassinolide. Required for the conversion of 24-methylenecholesterol to campesterol and for the conversion of isofucosterol to sitosterol. Necessary for both the isomerization and reduction of 24-methylenecholesterol. Regulates indirectly phytochrome-mediated light responses through the modulation of brassinosteroid biosynthesis., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 7, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q0WWL4;Q38808;Q8RXF4", "ec_number_list": [ { "id": "1.3.1.72", "url": "https://www.rhea-db.org/rhea/?query=ec:1.3.1.72", "type": "external" } ], "go_molecular_function": "GO:0005516 calmodulin binding;GO:0071949 FAD binding;GO:0003824 catalytic activity;GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor;GO:0050614 Delta24-sterol reductase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005829 cytosol;GO:0005773 vacuole;GO:0000325 plant-type vacuole", "go_biological_process": "GO:0016132 brassinosteroid biosynthetic process;GO:0006694 steroid biosynthetic process;GO:0008202 steroid metabolic process;GO:0009416 response to light stimulus;GO:0009826 unidimensional cell growth", "synthesized_glycan_count": 0, "hit_score": 1.8, "record_id": "Q39085-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q39088-1", "uniprot_id": [ { "id": "DOF34_ARATH", "url": "https://www.uniprot.org/uniprot/Q39088", "type": "external" } ], "mass": 26382.0, "length": 253, "protein_name": "Dof zinc finger protein DOF3.4", "gene_name": "DOF3.4", "organism": "Arabidopsis", "refseq_name": "OBF binding protein 1", "refseq_ac": [ { "id": "NP_190610", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_190610", "type": "external" } ], "gene_names_uniprotkb": "DOF3.4; F11C1_250; OBP1", "gene_names_refseq": "OBF binding protein 1; OBP1", "protein_names_uniprotkb": "Dof zinc finger protein DOF3.4; AtDOF3.4; OBF-binding protein 1", "protein_names_refseq": "OBF binding protein 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G50410)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "10758484;11130713;12475498;27862469;8718629", "class_list": "", "function": "Transcription factor that binds specifically to a 5'-AA[AG]G-3' consensus core sequence. Enhances the DNA binding of OBF transcription factors to OCS elements., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9M2R8", "ec_number_list": [], "go_molecular_function": "GO:0003677 DNA binding;GO:0003700 DNA-binding transcription factor activity;GO:0008270 zinc ion binding;GO:0000976 transcription cis-regulatory region binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0045893 positive regulation of DNA-templated transcription;GO:0045787 positive regulation of cell cycle;GO:0009751 response to salicylic acid;GO:0009733 response to auxin", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q39088-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q39089-1", "uniprot_id": [ { "id": "PAC_ARATH", "url": "https://www.uniprot.org/uniprot/Q39089", "type": "external" } ], "mass": 36612.0, "length": 313, "protein_name": "Protein PALE CRESS, chloroplastic", "gene_name": "PAC", "organism": "Arabidopsis", "refseq_name": "pale cress protein (PAC)", "refseq_ac": [ { "id": "NP_001078079", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001078079", "type": "external" } ], "gene_names_uniprotkb": "PAC; F11L15.2; t9j23", "gene_names_refseq": "F11L15.2; PAC; PALE CRESS", "protein_names_uniprotkb": "Protein PALE CRESS, chloroplastic", "protein_names_refseq": "pale cress protein (PAC)", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G48120)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "10350211;10617197;11910074;14593172;25561503;27862469;7919990;8709959;9648738", "class_list": "", "function": "Required for the differentiation of chloroplast from proplastids or etioplasts, probably by modulating some chloroplast-encoded genes expression and mRNA maturation. Involved in leaf-cells differentiation., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A8MQP8;Q39175;Q7DLY1", "ec_number_list": [], "go_molecular_function": "GO:0003723 RNA binding;GO:0019843 rRNA binding", "go_cellular_component": "GO:0009501 amyloplast;GO:0009507 chloroplast;GO:0009509 chromoplast;GO:0009570 chloroplast stroma;GO:0042644 chloroplast nucleoid", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0042254 ribosome biogenesis;GO:0016070 RNA metabolic process;GO:0071482 cellular response to light stimulus;GO:0009658 chloroplast organization", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "Q39089-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q39096-1", "uniprot_id": [ { "id": "ERD15_ARATH", "url": "https://www.uniprot.org/uniprot/Q39096", "type": "external" } ], "mass": 18411.0, "length": 163, "protein_name": "Protein EARLY RESPONSIVE TO DEHYDRATION 15", "gene_name": "ERD15", "organism": "Arabidopsis", "refseq_name": "dehydration-induced protein (ERD15)", "refseq_ac": [ { "id": "NP_001189727", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001189727", "type": "external" } ], "gene_names_uniprotkb": "ERD15; CID1; F13H10.2; LSR1; T26J13.2", "gene_names_refseq": "CID1; CTC-Interacting Domain 1; DEHYDRATION-INDUCED PROTEIN; EARLY RESPONSIVE TO DEHYDRATION 15; ERD15; LIGHT STRESS-REGULATED 1; LSR1; T26J13.2", "protein_names_uniprotkb": "Protein EARLY RESPONSIVE TO DEHYDRATION 15; PABP-interacting protein 1; PAM2-containing protein CID1; Poly(A)-binding protein-interacting protein 1; Polyadenylate-binding protein-interacting protein 1; Protein CTC-INTERACTING DOMAIN 1; Protein LIGHT STRESS-REGULATED 1", "protein_names_refseq": "dehydration-induced protein (ERD15)", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G41430)", "pathway_count": 1, "publication_count": 14, "publication_id_list": "10550893;10617197;11683875;14593172;14686431;14993207;15650869;17056758;18796636;19423640;22118612;23172892;27862469;7846179", "class_list": "", "function": "Central component of stress responses that interacts with poly(A)-binding proteins. Negative regulator of abscisic acid (ABA) responses, including resistance to drought and freezing as well as stomatal closure regulation. Mediates resistance to the bacterial necrotroph pathogen Erwinia carotovora subsp. carotovora and promotes the induction of marker genes for systemic acquired resistance (SAR)., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q3E6W2;Q8LBP5", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005829 cytosol;GO:0042651 thylakoid membrane", "go_biological_process": "GO:0009617 response to bacterium;GO:0071456 cellular response to hypoxia;GO:0009414 response to water deprivation;GO:0009644 response to high light intensity;GO:0010196 nonphotochemical quenching", "synthesized_glycan_count": 0, "hit_score": 1.5, "record_id": "Q39096-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q39102-1", "uniprot_id": [ { "id": "FTSH1_ARATH", "url": "https://www.uniprot.org/uniprot/Q39102", "type": "external" } ], "mass": 76759.0, "length": 716, "protein_name": "ATP-dependent zinc metalloprotease FTSH 1, chloroplastic", "gene_name": "FTSH1", "organism": "Arabidopsis", "refseq_name": "FTSH protease 1", "refseq_ac": [ { "id": "NP_564563", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_564563", "type": "external" } ], "gene_names_uniprotkb": "FTSH1; AAA; F14I3.14; FTSH", "gene_names_refseq": "F14I3.14; F14I3_14; FTSH protease 1; FTSH1", "protein_names_uniprotkb": "ATP-dependent zinc metalloprotease FTSH 1, chloroplastic; 3.4.24.-; AtFTSH1", "protein_names_refseq": "FTSH protease 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G50250)", "pathway_count": 1, "publication_count": 16, "publication_id_list": "10715327;11130712;11299370;14593172;14630971;14996218;15266057;15918877;16040665;16126834;17714429;18431481;22060019;25561503;27862469;8910594", "class_list": "", "function": "Part of a complex that function as an ATP-dependent zinc metallopeptidase. Involved in the thylakoid formation and in the removal of damaged D1 in the photosystem II, preventing cell death under high-intensity light conditions., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O04172;Q9SX43", "ec_number_list": [], "go_molecular_function": "GO:0003729 mRNA binding;GO:0004222 metalloendopeptidase activity;GO:0005524 ATP binding;GO:0046872 metal ion binding;GO:0016887 ATP hydrolysis activity", "go_cellular_component": "GO:0005634 nucleus;GO:0009535 chloroplast thylakoid membrane;GO:0009507 chloroplast;GO:0009534 chloroplast thylakoid;GO:0009941 chloroplast envelope", "go_biological_process": "GO:0006508 proteolysis;GO:0010206 photosystem II repair;GO:0010304 PSII associated light-harvesting complex II catabolic process", "synthesized_glycan_count": 0, "hit_score": 1.7, "record_id": "Q39102-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q39103-1", "uniprot_id": [ { "id": "G3OX1_ARATH", "url": "https://www.uniprot.org/uniprot/Q39103", "type": "external" } ], "mass": 40162.0, "length": 358, "protein_name": "Gibberellin 3-beta-dioxygenase 1", "gene_name": "GA3OX1", "organism": "Arabidopsis", "refseq_name": "gibberellin 3-oxidase 1", "refseq_ac": [ { "id": "NP_173008", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_173008", "type": "external" } ], "gene_names_uniprotkb": "GA3OX1; GA4; T16N11.6", "gene_names_refseq": "ARABIDOPSIS THALIANA GIBBERELLIN 3 BETA-HYDROXYLASE 1; ATGA3OX1; GA REQUIRING 4; GA3OX1; GA4; GIBBERELLIN 3 BETA-HYDROXYLASE; T16N11.6; T16N11_6; gibberellin 3-oxidase 1", "protein_names_uniprotkb": "Gibberellin 3-beta-dioxygenase 1; 1.14.11.15; AtGA3ox1; GA 3-oxidase 1; Gibberellin 3 beta-hydroxylase 1", "protein_names_refseq": "gibberellin 3-oxidase 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G15550)", "pathway_count": 1, "publication_count": 15, "publication_id_list": "11130712;11737781;14593172;14729916;15181202;15923331;15927942;16460513;16905669;17277098;21056641;27862469;7756830;9625708;9836749", "class_list": "", "function": "Converts the inactive gibberellin (GA) precursors GA9 and GA20 into the bioactives gibberellins GA4 and GA1, respectively. Involved in the production of bioactive GA for vegetative growth and development., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q0WTG6", "ec_number_list": [ { "id": "1.14.11.15", "url": "https://www.rhea-db.org/rhea/?query=ec:1.14.11.15", "type": "external" } ], "go_molecular_function": "GO:0046872 metal ion binding;GO:0016707 gibberellin 3-beta-dioxygenase activity", "go_cellular_component": "GO:0005737 cytoplasm", "go_biological_process": "GO:0009416 response to light stimulus;GO:0010114 response to red light;GO:0009740 gibberellic acid mediated signaling pathway;GO:0009639 response to red or far red light;GO:0009686 gibberellin biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 1.6, "record_id": "Q39103-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q39112-1", "uniprot_id": [ { "id": "GAOX3_ARATH", "url": "https://www.uniprot.org/uniprot/Q39112", "type": "external" } ], "mass": 43437.0, "length": 380, "protein_name": "Gibberellin 20 oxidase 3", "gene_name": "GA20OX3", "organism": "Arabidopsis", "refseq_name": "gibberellin 20-oxidase 3", "refseq_ac": [ { "id": "NP_196337", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_196337", "type": "external" } ], "gene_names_uniprotkb": "GA20OX3; 20ox3; T28J14_140; YAP169", "gene_names_refseq": "ARABIDOPSIS THALIANA GIBBERELLIN 20-OXIDASE 3; ATGA20OX3; GA20OX3; T28J14.140; T28J14_140; YAP169; gibberellin 20-oxidase 3", "protein_names_uniprotkb": "Gibberellin 20 oxidase 3; 1.14.11.-; GA 20-oxidase 3; Gibberellin C-20 oxidase 3", "protein_names_refseq": "gibberellin 20-oxidase 3", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G07200)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "11130714;14593172;15927942;16905669;18069939;21056641;23572148;27862469;7630935", "class_list": "", "function": "Key oxidase enzyme in the biosynthesis of gibberellin that catalyzes the conversion of GA12 and GA53 to GA9 and GA20 respectively, via a three-step oxidation at C-20 of the GA skeleton, and GA25 is also formed as a minor product. GA53 is less effectively oxidized than GA12., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [ { "id": "1.14.11.-", "url": "https://www.rhea-db.org/rhea/?query=ec:1.14.11.-", "type": "external" } ], "go_molecular_function": "GO:0046872 metal ion binding;GO:0045544 gibberellin 20-oxidase activity", "go_cellular_component": "GO:0005737 cytoplasm", "go_biological_process": "GO:0009416 response to light stimulus;GO:0009686 gibberellin biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "Q39112-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q39119-1", "uniprot_id": [ { "id": "VPEG_ARATH", "url": "https://www.uniprot.org/uniprot/Q39119", "type": "external" } ], "mass": 54336.0, "length": 494, "protein_name": "Vacuolar-processing enzyme gamma-isozyme", "gene_name": "F26P21.60", "organism": "Arabidopsis", "refseq_name": "gamma vacuolar processing enzyme", "refseq_ac": [ { "id": "NP_195020", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_195020", "type": "external" } ], "gene_names_uniprotkb": "F26P21.60", "gene_names_refseq": "F26P21.60; F26P21_60; GAMMA-VPE; GAMMAVPE; gamma vacuolar processing enzyme", "protein_names_uniprotkb": "Vacuolar-processing enzyme gamma-isozyme; 3.4.22.34; Asparaginyl endopeptidase gamma-VPE; Gamma-VPE", "protein_names_refseq": "gamma vacuolar processing enzyme", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G32940)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "10417725;10617198;14593172;14688293;27862469;8589932", "class_list": "", "function": "Asparagine-specific endopeptidase involved in the processing of vacuolar seed protein precursors into the mature forms (PubMed:10417725). Probably involved in post-translational proteolysis of seed storage proteins in the protein storage vacuole of developing seeds (PubMed:14688293)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 1, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "Q93VM0;Q9SB73", "ec_number_list": [], "go_molecular_function": "GO:0004175 endopeptidase activity;GO:0004197 cysteine-type endopeptidase activity", "go_cellular_component": "GO:0005576 extracellular region;GO:0000323 lytic vacuole;GO:0000326 protein storage vacuole", "go_biological_process": "GO:0009611 response to wounding;GO:0051603 proteolysis involved in protein catabolic process;GO:0009751 response to salicylic acid;GO:0006624 vacuolar protein processing;GO:0009723 response to ethylene", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q39119-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000010000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q39123-1", "uniprot_id": [ { "id": "ATHB8_ARATH", "url": "https://www.uniprot.org/uniprot/Q39123", "type": "external" } ], "mass": 91996.0, "length": 833, "protein_name": "Homeobox-leucine zipper protein ATHB-8", "gene_name": "ATHB-8", "organism": "Arabidopsis", "refseq_name": "homeobox-leucine zipper protein ATHB-8", "refseq_ac": [ { "id": "NP_195014", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_195014", "type": "external" } ], "gene_names_uniprotkb": "ATHB-8; HB8; T16I18.90", "gene_names_refseq": "ATHB-8; ATHB8; HB-8; T16I18.90; T16I18_90; homeobox gene 8", "protein_names_uniprotkb": "Homeobox-leucine zipper protein ATHB-8; HD-ZIP protein ATHB-8; Homeodomain transcription factor ATHB-8", "protein_names_refseq": "homeobox-leucine zipper protein ATHB-8", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G32880)", "pathway_count": 1, "publication_count": 13, "publication_id_list": "10617198;11402194;12447534;14593172;15598805;16805899;17237362;17376809;18408069;22060019;25263420;27862469;8575317", "class_list": "", "function": "Probable transcription factor involved in the regulation of vascular development. May promote differentiation of precambial and cambial cells., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0003700 DNA-binding transcription factor activity;GO:0008289 lipid binding;GO:0000976 transcription cis-regulatory region binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0008284 positive regulation of cell population proliferation;GO:0030154 cell differentiation;GO:0045597 positive regulation of cell differentiation;GO:0009733 response to auxin", "synthesized_glycan_count": 0, "hit_score": 1.4, "record_id": "Q39123-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q39128-1", "uniprot_id": [ { "id": "KAT1_ARATH", "url": "https://www.uniprot.org/uniprot/Q39128", "type": "external" } ], "mass": 78271.0, "length": 677, "protein_name": "Potassium channel KAT1", "gene_name": "KAT1", "organism": "Arabidopsis", "refseq_name": "1", "refseq_ac": [ { "id": "NP_199436", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_199436", "type": "external" } ], "gene_names_uniprotkb": "KAT1; MPL12.2", "gene_names_refseq": "AtKAT1; KAT1; MPL12.2; MPL12_2; potassium channel in Arabidopsis thaliana 1", "protein_names_uniprotkb": "Potassium channel KAT1", "protein_names_refseq": "1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G46240)", "pathway_count": 1, "publication_count": 19, "publication_id_list": "10206968;11042178;11500563;1570292;19785574;27002025;27862469;7480337;7592636;8755614;8798465;8966547;8995396;9368418;9635749;9679202;9688573;9834140;9916143", "class_list": "", "function": "Highly selective inward-rectifying potassium channel. This voltage-gated channel could mediate long-term potassium influx into guard cells leading to stomatal opening. Assuming opened or closed conformations in response to the voltage difference across the membrane, the channel is activated by hyperpolarization. The channel activity is enhanced upon external acidification. Also permeable to ammonium ions. Blocked by tetraethylammonium and barium ions., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 31, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q42426", "ec_number_list": [], "go_molecular_function": "GO:0042802 identical protein binding;GO:0005242 inward rectifier potassium channel activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005886 plasma membrane;GO:0034702 monoatomic ion channel complex", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 2.0, "record_id": "Q39128-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q39134-1", "uniprot_id": [ { "id": "AAP3_ARATH", "url": "https://www.uniprot.org/uniprot/Q39134", "type": "external" } ], "mass": 52037.0, "length": 476, "protein_name": "Amino acid permease 3", "gene_name": "AAP3", "organism": "Arabidopsis", "refseq_name": "amino acid permease 3", "refseq_ac": [ { "id": "NP_177862", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_177862", "type": "external" } ], "gene_names_uniprotkb": "AAP3; F2P24.9", "gene_names_refseq": "AAP3; ATAAP3; F2P24.9; F2P24_9; amino acid permease 3", "protein_names_uniprotkb": "Amino acid permease 3; Amino acid transporter AAP3", "protein_names_refseq": "amino acid permease 3", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G77380)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "10359089;11130712;12148530;14593172;15361541;18681934;27862469;7608199", "class_list": "", "function": "Amino acid-proton symporter. Stereospecific transporter with a broad specificity for GABA, tryptophan and both neutral and basic amino acids. High affinity transport of cationic amino acids., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q8LE75", "ec_number_list": [], "go_molecular_function": "GO:0015171 amino acid transmembrane transporter activity;GO:0015293 symporter activity;GO:0015174 basic amino acid transmembrane transporter activity", "go_cellular_component": "GO:0005886 plasma membrane;GO:0016020 membrane;GO:0031965 nuclear membrane", "go_biological_process": "GO:0015802 basic amino acid transport;GO:0006952 defense response;GO:0003333 amino acid transmembrane transport", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "Q39134-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q39161-1", "uniprot_id": [ { "id": "NIR_ARATH", "url": "https://www.uniprot.org/uniprot/Q39161", "type": "external" } ], "mass": 65505.0, "length": 586, "protein_name": "Ferredoxin--nitrite reductase, chloroplastic", "gene_name": "NIR1", "organism": "Arabidopsis", "refseq_name": "nitrite reductase 1", "refseq_ac": [ { "id": "NP_179164", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_179164", "type": "external" } ], "gene_names_uniprotkb": "NIR1; F9O13.17; NIR", "gene_names_refseq": "ARABIDOPSIS THALIANA NITRITE REDUCTASE; ATHNIR; NIR1; NIR; NITRITE REDUCTASE; nitrite reductase 1", "protein_names_uniprotkb": "Ferredoxin--nitrite reductase, chloroplastic; 1.7.7.1; NiR", "protein_names_refseq": "nitrite reductase 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G15620)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "10617197;11402201;14593172;17272265;23820729;25561503;27862469;7894060;9161026", "class_list": "", "function": "Catalyzes the six-electron reduction of nitrite to ammonium., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 3, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q8H163;Q8H164", "ec_number_list": [ { "id": "1.7.7.1", "url": "https://www.rhea-db.org/rhea/?query=ec:1.7.7.1", "type": "external" } ], "go_molecular_function": "GO:0046872 metal ion binding;GO:0051539 4 iron, 4 sulfur cluster binding;GO:0016491 oxidoreductase activity;GO:0020037 heme binding;GO:0050421 nitrite reductase (NO-forming) activity", "go_cellular_component": "GO:0005739 mitochondrion;GO:0009507 chloroplast;GO:0009570 chloroplast stroma;GO:0048046 apoplast", "go_biological_process": "GO:0042128 nitrate assimilation;GO:0010167 response to nitrate", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "Q39161-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q39162-1", "uniprot_id": [ { "id": "TGA4_ARATH", "url": "https://www.uniprot.org/uniprot/Q39162", "type": "external" } ], "mass": 41751.0, "length": 364, "protein_name": "Transcription factor TGA4", "gene_name": "TGA4", "organism": "Arabidopsis", "refseq_name": "TGACG motif-binding factor 4", "refseq_ac": [ { "id": "NP_001190270", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001190270", "type": "external" } ], "gene_names_uniprotkb": "TGA4; BZIP57; OBF4; T31P16_20", "gene_names_refseq": "OBF4; OCS BINDING ELEMENT 4; OCS ELEMENT BINDING FACTOR 4; OCTOPINE SYNTHASE ELEMENT-BINDING PROTEIN; T31P16.20; T31P16_20; TGA4; TGACG motif-binding factor 4", "protein_names_uniprotkb": "Transcription factor TGA4; AtbZIP57; OBF4; Ocs element-binding factor 4; bZIP transcription factor 57", "protein_names_refseq": "TGACG motif-binding factor 4", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G10030)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "10758484;11130714;11906833;12953119;27862469;35524409;8252072;8628224;8718629;9159183", "class_list": "", "function": "Transcriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. May be involved in the induction of the systemic acquired resistance (SAR) via its interaction with NPR1. Could also bind to the Hex-motif (5'-TGACGTGG-3') another cis-acting element found in plant histone promoters., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 2, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9LX25", "ec_number_list": [], "go_molecular_function": "GO:0003677 DNA binding;GO:0003700 DNA-binding transcription factor activity;GO:0000976 transcription cis-regulatory region binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "Q39162-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q39172-1", "uniprot_id": [ { "id": "AER_ARATH", "url": "https://www.uniprot.org/uniprot/Q39172", "type": "external" } ], "mass": 38134.0, "length": 345, "protein_name": "NADPH-dependent oxidoreductase 2-alkenal reductase", "gene_name": "AER", "organism": "Arabidopsis", "refseq_name": "alkenal reductase", "refseq_ac": [ { "id": "NP_197199", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_197199", "type": "external" } ], "gene_names_uniprotkb": "AER; F2K13_120; P1", "gene_names_refseq": "AER; AT-AER; F2K13.120; F2K13_120; alkenal reductase", "protein_names_uniprotkb": "NADPH-dependent oxidoreductase 2-alkenal reductase; 1.3.1.-; 1.3.1.74; ALH; AtAER; DBR1; NADP-dependent alkenal double bond reductase P1; NADPH-azodicarbonyl/quinone reductase; NADPH:2-alkenal/one alpha,beta-hydrogenase; P1-ZCr; P1-zeta-crystallin protein", "protein_names_refseq": "alkenal reductase", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G16970)", "pathway_count": 1, "publication_count": 13, "publication_id_list": "10848984;11130714;12514241;14593172;16299173;17028190;25561503;26678323;27862469;28011693;29167316;30833711;7592828", "class_list": "", "function": "Involved in the detoxification of reactive carbonyls (PubMed:10848984, PubMed:12514241, PubMed:16299173). Acts on lipid peroxide-derived reactive aldehydes (PubMed:12514241). Specific to a double bond activated by an adjacent carbonyl group (PubMed:12514241). Can use both quinones and diamide as substrates, but not menadione, ferricyanide or phylloquinone (PubMed:10848984). Can use 4-hydroxy-(2E)-nonenal (HNE), 4-hydroxy-(2E)-hexenal (HHE), (2E)-nonenal, (2E)-hexenal, (2E)-pentenal, propenal (acrolein), 3-buten-2-one and 3-penten-2-one, but not (R)-(-)-carvone, n-nonanal, n-hexanal, (3Z)-hexanal, cyclohex-2-en-1-one or 12-oxo phytodienoic acid (OPDA) as electron acceptors (PubMed:12514241). Catalyzes the reduction of the alpha,beta-unsaturated bond of 2-alkenals, of lipid peroxide-derived oxenes 9-oxo-10(E),12(Z)-octadecadienoic acid (9-KODE) and 13-oxo-9(Z),11(E)-octadecadienoic acid (13-KODE), as well as 4-oxo-(2E)-nonenal and 4-hydroxynonenal (PubMed:16299173). Can use 12-oxo-10(E) dodecanoate (traumatin), trans-1,3 diphenyl-2-propenone, trans-1,4-diphenyl-2-butene-1,4-dione, 9-oxo-12,13-epoxy-(10E)-octadecenoic acid (trans-EKODE-1b) and 9,13-dihydroxy-10-oxo-11-octadecenoic acid as substrates (PubMed:26678323). Catalyzes the reduction of the 7-8 double bond of phenylpropanal substrates, such as p-coumaryl aldehyde and coniferyl aldehyde (in vitro) (PubMed:17028190). Has activity towards toxic substrates, such as 4-hydroxy-(2E)-nonenal (in vitro) (PubMed:17028190). May play a distinct role in plant antioxidant defense and is possibly involved in NAD(P)/NAD(P)H homeostasis (PubMed:17028190)., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q501A9;Q8L865", "ec_number_list": [ { "id": "1.3.1.-", "url": "https://www.rhea-db.org/rhea/?query=ec:1.3.1.-", "type": "external" }, { "id": "1.3.1.74", "url": "https://www.rhea-db.org/rhea/?query=ec:1.3.1.74", "type": "external" } ], "go_molecular_function": "GO:0032440 2-alkenal reductase [NAD(P)H] activity;GO:0035798 2-alkenal reductase (NADPH) activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005654 nucleoplasm;GO:0005737 cytoplasm;GO:0005829 cytosol;GO:0009536 plastid", "go_biological_process": "GO:0006979 response to oxidative stress", "synthesized_glycan_count": 0, "hit_score": 1.4, "record_id": "Q39172-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q39176-1", "uniprot_id": [ { "id": "ERLI1_ARATH", "url": "https://www.uniprot.org/uniprot/Q39176", "type": "external" } ], "mass": 17308.0, "length": 168, "protein_name": "Lipid transfer protein EARLI 1", "gene_name": "EARLI1", "organism": "Arabidopsis", "refseq_name": "Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein", "refseq_ac": [ { "id": "NP_192985", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_192985", "type": "external" } ], "gene_names_uniprotkb": "EARLI1; T1P17.70", "gene_names_refseq": "EARLI1; EARLY ARABIDOPSIS ALUMINUM INDUCED 1; T1P17.70; T1P17_70; pEARLI 1", "protein_names_uniprotkb": "Lipid transfer protein EARLI 1; Protein EARLY ARABIDOPSIS ALUMINUM INDUCED 1; pEARLI1", "protein_names_refseq": "Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G12480)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "10617198;11202439;14593172;17257167;17786468;21556912;21815977;22759515;27862469", "class_list": "", "function": "Probable lipid transfer protein (LTP). May improve freezing survival. Seems to control the flowering process and lignin synthesis. Has an auxiliary role for germinability and early seedling development under low temperature and salt stress conditions, probably in an abscisic acid- (ABA) dependent manner. Confers resistance to Botrytis cinerea and exhibits anti-fungal activity, at least against S.cerevisiae, B.cinerea and Fusarium oxysporum, probably by increasing their membrane permeability., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0099503 secretory vesicle;GO:0005576 extracellular region;GO:0005783 endoplasmic reticulum;GO:0009506 plasmodesma;GO:0009505 plant-type cell wall", "go_biological_process": "GO:0009409 response to cold;GO:0009651 response to salt stress;GO:0050832 defense response to fungus;GO:0009682 induced systemic resistance;GO:0009737 response to abscisic acid", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "Q39176-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q39183-1", "uniprot_id": [ { "id": "D6KL2_ARATH", "url": "https://www.uniprot.org/uniprot/Q39183", "type": "external" } ], "mass": 64557.0, "length": 586, "protein_name": "Serine/threonine-protein kinase D6PKL2", "gene_name": "D6PKL2", "organism": "Arabidopsis", "refseq_name": "D6 protein kinase like 2", "refseq_ac": [ { "id": "NP_199586", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_199586", "type": "external" } ], "gene_names_uniprotkb": "D6PKL2; MCA23.7; PK5", "gene_names_refseq": "D6 protein kinase like 2; D6PKL2; MCA23.7; MCA23_7; PK5", "protein_names_uniprotkb": "Serine/threonine-protein kinase D6PKL2; 2.7.11.1; D6 protein kinase-like 2; Serine/threonine-protein kinase AtPK5", "protein_names_refseq": "D6 protein kinase like 2", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G47750)", "pathway_count": 1, "publication_count": 17, "publication_id_list": "10048488;14593172;19168677;23111157;23172892;23328941;23572148;23709629;23776212;24043427;24601666;25561503;26091701;27862469;29167316;30833711;8444349", "class_list": "", "function": "Protein kinase that regulates the auxin transport activity of PIN auxin efflux facilitators by direct phosphorylation. D6PK-mediated PIN phosphorylation promotes auxin transport in the hypocotyl and this is a prerequisite for PHOT1-dependent hypocotyl bending., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 6, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q8W4K8", "ec_number_list": [ { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.3.2.27", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.2.27", "type": "external" }, { "id": "2.7.10.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.-", "type": "external" }, { "id": "3.1.4.46", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.4.46", "type": "external" }, { "id": "2.7.11.25", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.25", "type": "external" }, { "id": "2.7.11.22", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.22", "type": "external" }, { "id": "2.7.10.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.1", "type": "external" }, { "id": "2.7.11.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.-", "type": "external" }, { "id": "2.7.11.24", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.24", "type": "external" }, { "id": "2.7.12.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.1", "type": "external" }, { "id": "2.7.11.23", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.23", "type": "external" }, { "id": "2.7.12.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.2", "type": "external" }, { "id": "2.7.-.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.-.-", "type": "external" }, { "id": "3.1.26.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.26.-", "type": "external" }, { "id": "3.1.3.16", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.16", "type": "external" }, { "id": "2.7.11.34", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.34", "type": "external" }, { "id": "4.6.1.2", "url": "https://www.rhea-db.org/rhea/?query=ec:4.6.1.2", "type": "external" } ], "go_molecular_function": "GO:0004672 protein kinase activity;GO:0004674 protein serine/threonine kinase activity;GO:0005524 ATP binding;GO:0016301 kinase activity;GO:0106310 protein serine kinase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005730 nucleolus;GO:0005737 cytoplasm;GO:0005886 plasma membrane", "go_biological_process": "GO:0006468 protein phosphorylation;GO:0009638 phototropism;GO:0009734 auxin-activated signaling pathway;GO:0010540 basipetal auxin transport", "synthesized_glycan_count": 0, "hit_score": 1.8, "record_id": "Q39183-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q39191-1", "uniprot_id": [ { "id": "WAK1_ARATH", "url": "https://www.uniprot.org/uniprot/Q39191", "type": "external" } ], "mass": 81211.0, "length": 735, "protein_name": "Wall-associated receptor kinase 1", "gene_name": "WAK1", "organism": "Arabidopsis", "refseq_name": "cell wall-associated kinase", "refseq_ac": [ { "id": "NP_564137", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_564137", "type": "external" } ], "gene_names_uniprotkb": "WAK1; F16F4.6; PRO25", "gene_names_refseq": "AtWAK1; F16F4.6; F16F4_6; PRO25; SERINE THREONINE KINASE; WAK1; cell wall-associated kinase 1; cell wall-associated kinase", "protein_names_uniprotkb": "Wall-associated receptor kinase 1; 2.7.11.-", "protein_names_refseq": "cell wall-associated kinase", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G21250)", "pathway_count": 1, "publication_count": 17, "publication_id_list": "10380805;11027363;11130712;11226187;11335717;11554472;12068092;12767910;12913180;1438303;14593172;15769808;16631829;25561503;27862469;8702686;9681026", "class_list": "", "function": "Serine/threonine-protein kinase that may function as a signaling receptor of extracellular matrix component. Binding to pectin may have significance in the control of cell expansion, morphogenesis and development. Required during plant's response to pathogen infection and in plant defense against heavy metal toxicity. Phosphorylates the oxygen-evolving enhancer protein 2 (OEE2) in an GRP-3-dependent manner., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 10, "predicted_n_glycosites": 10, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 6, "reported_mutagensis": 5, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 10, "binding_glycan_count": 0, "secondary_ac_list": "O81820;Q56WT2;Q9LMP0", "ec_number_list": [ { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.3.2.27", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.2.27", "type": "external" }, { "id": "2.7.10.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.-", "type": "external" }, { "id": "3.1.4.46", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.4.46", "type": "external" }, { "id": "2.7.11.25", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.25", "type": "external" }, { "id": "2.7.11.22", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.22", "type": "external" }, { "id": "2.7.10.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.1", "type": "external" }, { "id": "2.7.11.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.-", "type": "external" }, { "id": "2.7.11.24", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.24", "type": "external" }, { "id": "2.7.12.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.1", "type": "external" }, { "id": "2.7.11.23", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.23", "type": "external" }, { "id": "2.7.12.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.2", "type": "external" }, { "id": "2.7.-.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.-.-", "type": "external" }, { "id": "3.1.26.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.26.-", "type": "external" }, { "id": "3.1.3.16", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.16", "type": "external" }, { "id": "2.7.11.34", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.34", "type": "external" }, { "id": "4.6.1.2", "url": "https://www.rhea-db.org/rhea/?query=ec:4.6.1.2", "type": "external" } ], "go_molecular_function": "GO:0030247 polysaccharide binding;GO:0004674 protein serine/threonine kinase activity;GO:0005524 ATP binding;GO:0005509 calcium ion binding;GO:0016301 kinase activity", "go_cellular_component": "GO:0005886 plasma membrane;GO:0000325 plant-type vacuole;GO:0009505 plant-type cell wall", "go_biological_process": "GO:0007166 cell surface receptor signaling pathway;GO:0009615 response to virus;GO:0050832 defense response to fungus;GO:0009751 response to salicylic acid", "synthesized_glycan_count": 0, "hit_score": 1.8, "record_id": "Q39191-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000010001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q39204-1", "uniprot_id": [ { "id": "MYC2_ARATH", "url": "https://www.uniprot.org/uniprot/Q39204", "type": "external" } ], "mass": 67950.0, "length": 623, "protein_name": "Transcription factor MYC2", "gene_name": "MYC2", "organism": "Arabidopsis", "refseq_name": "Basic helix-loop-helix (bHLH) DNA-binding family protein", "refseq_ac": [ { "id": "NP_174541", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_174541", "type": "external" } ], "gene_names_uniprotkb": "MYC2; BHLH6; EN38; F6N18.4; JAI1; JIN1; RAP1; RD22BP1; ZBF1", "gene_names_refseq": "ATMYC2; F6N18.4; F6N18_4; JAI1; JASMONATE INSENSITIVE 1; JIN1; MYC2; RD22BP1; ZBF1", "protein_names_uniprotkb": "Transcription factor MYC2; AtMYC2; AtbHLH6; Basic helix-loop-helix protein 6; Protein JASMONATE INSENSITIVE 1; R-homologous Arabidopsis protein 1; RAP-1; Transcription factor EN 38; Z-box binding factor 1 protein; bHLH 6; bHLH transcription factor bHLH006; rd22BP1", "protein_names_refseq": "Basic helix-loop-helix (bHLH) DNA-binding family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G32640)", "pathway_count": 1, "publication_count": 39, "publication_id_list": "11130712;12509522;12679534;12897250;14593172;14600211;15208388;15923349;18463617;19245862;19309455;20466843;21321051;21335373;21954460;22669881;22693280;22822206;23111157;23142764;23169619;23572148;23593022;23660473;23776212;23943862;24890857;25561503;25846245;26187819;27357749;27862469;28011693;28514654;29654922;30833711;31206553;9177323;9368419", "class_list": "", "function": "Transcriptional activator. Common transcription factor of light, abscisic acid (ABA), and jasmonic acid (JA) signaling pathways. With MYC3 and MYC4, controls additively subsets of JA-dependent responses. In cooperation with MYB2 is involved in the regulation of ABA-inducible genes under drought stress conditions. Can form complexes with all known glucosinolate-related MYBs to regulate glucosinolate biosynthesis. Binds to the MYC recognition site (5'-CACATG-3'), and to the G-box (5'-CACNTG-3') and Z-box (5'-ATACGTGT-3') of promoters. Binds directly to the promoters of the transcription factors PLETHORA1 (PLT1) and PLT2 and represses their expression. Negative regulator of blue light-mediated photomorphogenic growth and blue- and far-red-light regulated gene expression. Activates multiple TIFY/JAZ promoters. Positive regulator of lateral root formation. Regulates sesquiterpene biosynthesis. Subjected to proteasome-dependent proteolysis. The presence of the destruction element (DE) involved in turnover is required for the function to regulate gene transcription., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 3, "predicted_n_glycosites": 0, "predicted_o_glycosites": 3, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 8, "reported_mutagensis": 5, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 3, "binding_glycan_count": 0, "secondary_ac_list": "O48644;Q5K1L7;Q8W2F4;Q9LPJ8", "ec_number_list": [], "go_molecular_function": "GO:0003677 DNA binding;GO:0003700 DNA-binding transcription factor activity;GO:0046983 protein dimerization activity;GO:0019900 kinase binding;GO:0000976 transcription cis-regulatory region binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0051289 protein homotetramerization;GO:0006355 regulation of DNA-templated transcription;GO:0009611 response to wounding;GO:0045893 positive regulation of DNA-templated transcription", "synthesized_glycan_count": 0, "hit_score": 4.0, "record_id": "Q39204-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000001001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q39208-1", "uniprot_id": [ { "id": "SC5D1_ARATH", "url": "https://www.uniprot.org/uniprot/Q39208", "type": "external" } ], "mass": 33143.0, "length": 281, "protein_name": "Delta(7)-sterol-C5(6)-desaturase 1", "gene_name": "STE1", "organism": "Arabidopsis", "refseq_name": "sterol 1", "refseq_ac": [ { "id": "NP_186907", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_186907", "type": "external" } ], "gene_names_uniprotkb": "STE1; DWF7; F16B3.21", "gene_names_refseq": "BOULE 1; BUL1; DELTA7 STEROL C-5 DESATURASE; DWARF 7; DWF7; F16B3.21; F16B3_21; STE1; sterol 1", "protein_names_uniprotkb": "Delta(7)-sterol-C5(6)-desaturase 1; 1.14.19.20; Delta(7)-sterol-C5-desaturase 1; Delta-7-C-5 sterol desaturase 1; Protein DWARF 7; Protein STEROL 1", "protein_names_refseq": "sterol 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G02580)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "10344195;10651635;11130713;11141078;27862469;8919915;9927639", "class_list": "", "function": "Involved in the biosynthesis of sitosterol and campesterol, a precursor of growth-promoting brassinosteroids., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 24, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q8L9C0;Q9SWU4;Q9SYS2", "ec_number_list": [ { "id": "1.14.19.20", "url": "https://www.rhea-db.org/rhea/?query=ec:1.14.19.20", "type": "external" } ], "go_molecular_function": "GO:0000248 C-5 sterol desaturase activity;GO:0005506 iron ion binding;GO:0050046 delta7-sterol 5(6)-desaturase activity", "go_cellular_component": "GO:0005789 endoplasmic reticulum membrane", "go_biological_process": "GO:0016132 brassinosteroid biosynthetic process;GO:0016126 sterol biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q39208-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q39214-1", "uniprot_id": [ { "id": "RPM1_ARATH", "url": "https://www.uniprot.org/uniprot/Q39214", "type": "external" } ], "mass": 106883.0, "length": 926, "protein_name": "Disease resistance protein RPM1", "gene_name": "RPM1", "organism": "Arabidopsis", "refseq_name": "NB-ARC domain-containing disease resistance protein", "refseq_ac": [ { "id": "NP_187360", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_187360", "type": "external" } ], "gene_names_uniprotkb": "RPM1; F17A9.20; RPS3", "gene_names_refseq": "DISEASE RESISTANCE PROTEIN RPM1; RESISTANCE TO P. SYRINGAE PV MACULICOLA 1; RESISTANCE TO PSEUDOMONAS SYRINGAE 3; RPM1; RPS3", "protein_names_uniprotkb": "Disease resistance protein RPM1; Resistance to Pseudomonas syringae protein 3; Resistance to Pseudomonas syringae pv. Maculicola protein 1", "protein_names_refseq": "NB-ARC domain-containing disease resistance protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G07040)", "pathway_count": 1, "publication_count": 12, "publication_id_list": "11130713;11884685;11955429;12062092;15722472;16212605;20332379;22074104;27862469;30833711;7638602;9861059", "class_list": "", "function": "Disease resistance (R) protein that specifically recognizes the AvrRpm1 type III effector avirulence protein from Pseudomonas syringae (PubMed:9861059). Resistance proteins guard the plant against pathogens that contain an appropriate avirulence protein via an indirect interaction with this avirulence protein (PubMed:9861059). That triggers a defense system including the hypersensitive response (HR), which restricts the pathogen growth (PubMed:9861059). Acts via its interaction with RIN4, and probably triggers the plant resistance when RIN4 is phosphorylated by AvrRpm1. It is then degraded at the onset of the hypersensitive response (PubMed:9861059)., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 4, "reported_mutagensis": 45, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0005524 ATP binding;GO:0000166 nucleotide binding;GO:0043531 ADP binding", "go_cellular_component": "GO:0005886 plasma membrane;GO:0031234 extrinsic component of cytoplasmic side of plasma membrane;GO:0012505 endomembrane system", "go_biological_process": "GO:0098542 defense response to other organism;GO:0006952 defense response;GO:0009626 plant-type hypersensitive response", "synthesized_glycan_count": 0, "hit_score": 1.3, "record_id": "Q39214-1", "record_type": "protein", "filter_code": "0000000.0100101.010000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q39218-1", "uniprot_id": [ { "id": "SAT3_ARATH", "url": "https://www.uniprot.org/uniprot/Q39218", "type": "external" } ], "mass": 42721.0, "length": 391, "protein_name": "Serine acetyltransferase 3, mitochondrial", "gene_name": "SAT3", "organism": "Arabidopsis", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "SAT3; MJG19.6; SAT1; SATA", "gene_names_refseq": "", "protein_names_uniprotkb": "Serine acetyltransferase 3, mitochondrial; 2.3.1.30; 2; AtSAT-3; AtSERAT2; SAT-m", "protein_names_refseq": "", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G13110)", "pathway_count": 1, "publication_count": 12, "publication_id_list": "10907853;10940562;12650624;15579666;20720017;22730323;23602110;25561503;27862469;7821427;8639741;9830017", "class_list": "", "function": "", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q0V7U9;Q0WWV4;Q42532;Q43739;Q43740;Q7DLZ8;Q7DM01", "ec_number_list": [ { "id": "2.3.1.30", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.1.30", "type": "external" } ], "go_molecular_function": "GO:0008270 zinc ion binding;GO:0009001 serine O-acetyltransferase activity", "go_cellular_component": "GO:0005739 mitochondrion;GO:0005829 cytosol;GO:0009507 chloroplast", "go_biological_process": "GO:0006535 cysteine biosynthetic process from serine;GO:0019344 cysteine biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 1.3, "record_id": "Q39218-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q39231-1", "uniprot_id": [ { "id": "SUC2_ARATH", "url": "https://www.uniprot.org/uniprot/Q39231", "type": "external" } ], "mass": 54547.0, "length": 512, "protein_name": "Sucrose transport protein SUC2", "gene_name": "SUC2", "organism": "Arabidopsis", "refseq_name": "sucrose-proton symporter 2", "refseq_ac": [ { "id": "NP_173685", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_173685", "type": "external" } ], "gene_names_uniprotkb": "SUC2; SUT1; T22J18.12", "gene_names_refseq": "ARABIDOPSIS THALIANA SUCROSE-PROTON SYMPORTER 2; ATSUC2; SUC2; SUCROSE TRANSPORTER 1; SUCROSE-H+ SYMPORTER; SUT1; T22J18.12; T22J18_12; sucrose-proton symporter 2", "protein_names_uniprotkb": "Sucrose transport protein SUC2; AtSUC2; Sucrose permease 2; Sucrose transporter 1; Sucrose-proton symporter 2", "protein_names_refseq": "sucrose-proton symporter 2", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G22710)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "11087840;11130712;11673631;12529515;12689351;12954621;14593172;27862469;7647685;7920705", "class_list": "", "function": "Responsible for the transport of sucrose into the cell, with the concomitant uptake of protons (symport system). Can also transport other glucosides such as maltose, arbutin (hydroquinone-beta-D-glucoside), salicin (2-(hydroxymethyl)phenyl-beta-D-glucoside), alpha-phenylglucoside, beta-phenylglucoside, alpha-paranitrophenylglucoside, beta-paranitrophenylglucoside, and paranitrophenyl-beta-thioglucoside. May also transport biotin. Required for apoplastic phloem sucrose loading in source tissues (e.g. leaves) in order to transport it to sink tissues (e.g. roots, flowers)., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 1, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "O80550;Q8RWQ6", "ec_number_list": [], "go_molecular_function": "GO:0008506 sucrose:proton symporter activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005886 plasma membrane;GO:0005773 vacuole", "go_biological_process": "GO:0005985 sucrose metabolic process", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "Q39231-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000010000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q39232-1", "uniprot_id": [ { "id": "SUC1_ARATH", "url": "https://www.uniprot.org/uniprot/Q39232", "type": "external" } ], "mass": 54858.0, "length": 513, "protein_name": "Sucrose transport protein SUC1", "gene_name": "SUC1", "organism": "Arabidopsis", "refseq_name": "sucrose-proton symporter 1", "refseq_ac": [ { "id": "NP_177333", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_177333", "type": "external" } ], "gene_names_uniprotkb": "SUC1; F17M19.3", "gene_names_refseq": "ARABIDOPSIS THALIANA SUCROSE-PROTON SYMPORTER 1; ATSUC1; F17M19.3; F17M19_3; SUC1; SUCROSE-H+ SYMPORTER; sucrose-proton symporter 1", "protein_names_uniprotkb": "Sucrose transport protein SUC1; AtSUC1; Sucrose permease 1; Sucrose-proton symporter 1", "protein_names_refseq": "sucrose-proton symporter 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G71880)", "pathway_count": 1, "publication_count": 14, "publication_id_list": "10476074;11130712;11673631;14593172;17586839;18359840;18686298;22060019;23111157;27419465;27862469;7920705;9307438;9671798", "class_list": "", "function": "Responsible for the transport of sucrose into the cell, with the concomitant uptake of protons (symport system). This transport is both voltage- and energy-dependent. Can also transport other glucosides such as maltose, alpha-phenylglucoside and beta-phenylglucoside. May also transport biotin. Required for normal pollen germination and anthocyanin accumulation induced by sucrose., [UniProtKB, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 9, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0008506 sucrose:proton symporter activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005739 mitochondrion;GO:0005886 plasma membrane;GO:0005773 vacuole;GO:0009506 plasmodesma", "go_biological_process": "GO:0005985 sucrose metabolic process;GO:0009624 response to nematode;GO:0009846 pollen germination", "synthesized_glycan_count": 0, "hit_score": 1.5, "record_id": "Q39232-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q39233-1", "uniprot_id": [ { "id": "SYP21_ARATH", "url": "https://www.uniprot.org/uniprot/Q39233", "type": "external" } ], "mass": 31061.0, "length": 279, "protein_name": "Syntaxin-21", "gene_name": "SYP21", "organism": "Arabidopsis", "refseq_name": "syntaxin of plants 21", "refseq_ac": [ { "id": "NP_197185", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_197185", "type": "external" } ], "gene_names_uniprotkb": "SYP21; F5E19_170", "gene_names_refseq": "ATPEP12; ATSYP21; PEP12P; PEP12; SYP21; syntaxin of plants 21", "protein_names_uniprotkb": "Syntaxin-21; AtPEP12; AtSYP21; PEP12 homolog; aPEP12", "protein_names_refseq": "syntaxin of plants 21", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G16830)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "10504581;11130714;11739776;14593172;27862469;7638178;9144962", "class_list": "", "function": "May function in the docking or fusion of transport vesicles with the prevacuolar membrane., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0000149 SNARE binding;GO:0005484 SNAP receptor activity", "go_cellular_component": "GO:0005794 Golgi apparatus;GO:0016020 membrane;GO:0012505 endomembrane system;GO:0005770 late endosome;GO:0030140 trans-Golgi network transport vesicle", "go_biological_process": "GO:0006886 intracellular protein transport;GO:0061025 membrane fusion;GO:0045324 late endosome to vacuole transport;GO:0006906 vesicle fusion;GO:0048278 vesicle docking", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q39233-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q39238-1", "uniprot_id": [ { "id": "TSL_ARATH", "url": "https://www.uniprot.org/uniprot/Q39238", "type": "external" } ], "mass": 78149.0, "length": 688, "protein_name": "Serine/threonine-protein kinase TOUSLED", "gene_name": "TOUSLED", "organism": "Arabidopsis", "refseq_name": "Protein kinase superfamily protein", "refseq_ac": [ { "id": "NP_568405", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_568405", "type": "external" } ], "gene_names_uniprotkb": "TOUSLED; F22D1.100; TSL", "gene_names_refseq": "F22D1.100; F22D1_100; PROTEIN KINASE TSL; TOUSLED; TSL", "protein_names_uniprotkb": "Serine/threonine-protein kinase TOUSLED; 2.7.11.1", "protein_names_refseq": "Protein kinase superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G20930)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "11130714;14593172;15047893;23572148;26187819;27862469;8252629;9038200", "class_list": "", "function": "Required for correct initiation of floral organ primordia and for proper development of organ primordia. Phosphorylates in vitro ASF1B/SGA1, the C-terminal part of TKI1 and histone H3., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 4, "reported_mutagensis": 2, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q8LPL1", "ec_number_list": [ { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.3.2.27", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.2.27", "type": "external" }, { "id": "2.7.10.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.-", "type": "external" }, { "id": "3.1.4.46", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.4.46", "type": "external" }, { "id": "2.7.11.25", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.25", "type": "external" }, { "id": "2.7.11.22", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.22", "type": "external" }, { "id": "2.7.10.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.1", "type": "external" }, { "id": "2.7.11.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.-", "type": "external" }, { "id": "2.7.11.24", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.24", "type": "external" }, { "id": "2.7.12.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.1", "type": "external" }, { "id": "2.7.11.23", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.23", "type": "external" }, { "id": "2.7.12.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.2", "type": "external" }, { "id": "2.7.-.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.-.-", "type": "external" }, { "id": "3.1.26.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.26.-", "type": "external" }, { "id": "3.1.3.16", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.16", "type": "external" }, { "id": "2.7.11.34", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.34", "type": "external" }, { "id": "4.6.1.2", "url": "https://www.rhea-db.org/rhea/?query=ec:4.6.1.2", "type": "external" } ], "go_molecular_function": "GO:0004674 protein serine/threonine kinase activity;GO:0005524 ATP binding;GO:0042802 identical protein binding;GO:0106310 protein serine kinase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm", "go_biological_process": "GO:0007059 chromosome segregation;GO:0035556 intracellular signal transduction;GO:0060147 regulation of post-transcriptional gene silencing", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "Q39238-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q39241-1", "uniprot_id": [ { "id": "TRXH5_ARATH", "url": "https://www.uniprot.org/uniprot/Q39241", "type": "external" } ], "mass": 13122.0, "length": 118, "protein_name": "Thioredoxin H5", "gene_name": "TRX5", "organism": "Arabidopsis", "refseq_name": "thioredoxin H-type 5", "refseq_ac": [ { "id": "NP_175128", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_175128", "type": "external" } ], "gene_names_uniprotkb": "TRX5; F27F5.21; LIV1", "gene_names_refseq": "ATH5; ATTRX5; F27F5.21; F27F5_21; LIV1; LOCUS OF INSENSITIVITY TO VICTORIN 1; THIOREDOXIN H-TYPE 5; THIOREDOXIN; TRX-h5; TRX5; thioredoxin H-type 5", "protein_names_uniprotkb": "Thioredoxin H5; AtTRX5; AtTrxh5; Protein LOCUS OF INSENSITIVITY TO VICTORIN 1; Thioredoxin 5", "protein_names_refseq": "thioredoxin H-type 5", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G45145)", "pathway_count": 1, "publication_count": 12, "publication_id_list": "11130712;11910074;14593172;14749482;14976236;17322408;19825616;22223895;27862469;29194485;7777559;8642611", "class_list": "", "function": "Thiol-disulfide oxidoreductase involved in response to pathogens and oxidative stresses. Required for the response to victorin, a phytotoxin which induces programmed cell death in sensitive plants. Possesses insulin disulfide bonds reducing activity., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 2, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q38881;Q56X92;Q9MAJ6", "ec_number_list": [], "go_molecular_function": "GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005783 endoplasmic reticulum;GO:0005829 cytosol;GO:0005886 plasma membrane", "go_biological_process": "GO:0006979 response to oxidative stress;GO:0009409 response to cold;GO:0050832 defense response to fungus;GO:0002213 defense response to insect;GO:0010188 response to microbial phytotoxin", "synthesized_glycan_count": 0, "hit_score": 1.3, "record_id": "Q39241-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q39243-1", "uniprot_id": [ { "id": "TRXB1_ARATH", "url": "https://www.uniprot.org/uniprot/Q39243", "type": "external" } ], "mass": 39626.0, "length": 375, "protein_name": "Thioredoxin reductase 1, mitochondrial", "gene_name": "NTR1", "organism": "Arabidopsis", "refseq_name": "NADPH-dependent thioredoxin reductase B", "refseq_ac": [ { "id": "NP_195271", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_195271", "type": "external" } ], "gene_names_uniprotkb": "NTR1; F15J1.30; NTRB", "gene_names_refseq": "ATNTRB; F15J1.30; F15J1_30; NADPH-DEPENDENT THIOREDOXIN REDUCTASE 1; NADPH-dependent thioredoxin reductase B; NTR1; NTRB", "protein_names_uniprotkb": "Thioredoxin reductase 1, mitochondrial; 1.8.1.9; AtNTRB; NADPH-dependent thioredoxin reductase 1; NADPH-dependent thioredoxin reductase B; NTR1", "protein_names_refseq": "NADPH-dependent thioredoxin reductase B", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G35460)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "10617198;11717467;14593172;15642341;25561503;25732537;27862469;8308900;9000629", "class_list": "", "function": "NADPH-dependent thioredoxin-disulfide reductase that reduces thioredoxins O1, O2 and F3., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q84W20;Q9SVW9", "ec_number_list": [ { "id": "1.8.1.9", "url": "https://www.rhea-db.org/rhea/?query=ec:1.8.1.9", "type": "external" } ], "go_molecular_function": "GO:0004791 thioredoxin-disulfide reductase (NADPH) activity", "go_cellular_component": "GO:0005739 mitochondrion;GO:0005829 cytosol;GO:0005886 plasma membrane;GO:0009941 chloroplast envelope", "go_biological_process": "GO:0051781 positive regulation of cell division;GO:0045454 cell redox homeostasis;GO:0019430 removal of superoxide radicals", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "Q39243-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q39249-1", "uniprot_id": [ { "id": "VDE_ARATH", "url": "https://www.uniprot.org/uniprot/Q39249", "type": "external" } ], "mass": 52017.0, "length": 462, "protein_name": "Violaxanthin de-epoxidase, chloroplastic", "gene_name": "VDE1", "organism": "Arabidopsis", "refseq_name": "non-photochemical quenching 1", "refseq_ac": [ { "id": "NP_001031000", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001031000", "type": "external" } ], "gene_names_uniprotkb": "VDE1; AVDE1; F22O13.3; NPQ1; T27G7.23; VXDE", "gene_names_refseq": "ARABIDOPSIS VIOLAXANTHIN DE-EPOXIDASE 1; AVDE1; F22O13.3; F22O13_3; NPQ1; VIOLAXANTHIN DE-EPOXIDASE PRECURSOR; non-photochemical quenching 1", "protein_names_uniprotkb": "Violaxanthin de-epoxidase, chloroplastic; 1.23.5.1; AtVxDE; Protein NON-PHOTOCHEMICAL QUENCHING 1", "protein_names_refseq": "non-photochemical quenching 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G08550)", "pathway_count": 1, "publication_count": 14, "publication_id_list": "10982442;11130712;11719511;11855651;11891252;14593172;14749490;16532316;19638474;20049866;25412899;27862469;9624110;9668132", "class_list": "", "function": "Part of the xanthophyll (or violaxanthin) cycle for controlling the concentration of zeaxanthin in chloroplasts. Catalyzes the two-step mono de-epoxidation reaction. Stereospecific for all-trans xanthophylls. Zeaxanthin induces the dissipation of excitation energy in the chlorophyll of the light-harvesting protein complex of photosystem II., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9SJD9", "ec_number_list": [ { "id": "1.23.5.1", "url": "https://www.rhea-db.org/rhea/?query=ec:1.23.5.1", "type": "external" } ], "go_molecular_function": "GO:0019904 protein domain specific binding;GO:0046422 violaxanthin de-epoxidase activity", "go_cellular_component": "GO:0005576 extracellular region;GO:0005829 cytosol;GO:0009507 chloroplast;GO:0009534 chloroplast thylakoid;GO:0009543 chloroplast thylakoid lumen", "go_biological_process": "GO:0006631 fatty acid metabolic process;GO:0009408 response to heat;GO:0016122 xanthophyll metabolic process;GO:0010028 xanthophyll cycle;GO:0015994 chlorophyll metabolic process", "synthesized_glycan_count": 0, "hit_score": 1.5, "record_id": "Q39249-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q39254-1", "uniprot_id": [ { "id": "CAX2_ARATH", "url": "https://www.uniprot.org/uniprot/Q39254", "type": "external" } ], "mass": 48215.0, "length": 441, "protein_name": "Vacuolar cation/proton exchanger 2", "gene_name": "CAX2", "organism": "Arabidopsis", "refseq_name": "cation exchanger 2", "refseq_ac": [ { "id": "NP_566452", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_566452", "type": "external" } ], "gene_names_uniprotkb": "CAX2; MDC11.10; MDC11.19", "gene_names_refseq": "CAX2; MDC11.19; atcax2; cation exchanger 2", "protein_names_uniprotkb": "Vacuolar cation/proton exchanger 2; Ca(2+)/H(+) antiporter CAX2; Ca(2+)/H(+) exchanger 2; Protein CATION EXCHANGER 2", "protein_names_refseq": "cation exchanger 2", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G13320)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "10819329;11500563;11562366;12496310;14593172;15862304;27862469;8710949", "class_list": "", "function": "Vacuolar cation/proton exchanger (CAX). Translocates Ca(2+) and other metal ions into vacuoles using the proton gradient formed by H(+)-ATPase and H(+)-pyrophosphatase., [UniProtKB, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 8, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "Q944Q1;Q9LTT6", "ec_number_list": [], "go_molecular_function": "GO:0015369 calcium:proton antiporter activity", "go_cellular_component": "GO:0012505 endomembrane system;GO:0005773 vacuole;GO:0009705 plant-type vacuole membrane", "go_biological_process": "GO:0006816 calcium ion transport;GO:0006874 intracellular calcium ion homeostasis;GO:0070588 calcium ion transmembrane transport;GO:0030001 metal ion transport", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "Q39254-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q39258-1", "uniprot_id": [ { "id": "VATE1_ARATH", "url": "https://www.uniprot.org/uniprot/Q39258", "type": "external" } ], "mass": 26060.0, "length": 230, "protein_name": "V-type proton ATPase subunit E1", "gene_name": "VHA-E1", "organism": "Arabidopsis", "refseq_name": "vacuolar ATP synthase subunit E1", "refseq_ac": [ { "id": "NP_192853", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_192853", "type": "external" } ], "gene_names_uniprotkb": "VHA-E1; EMB2448; F2P3.10; T22B4.130; TUFF; TUF; VATE", "gene_names_refseq": "T22B4.130; T22B4_130; TUFF; TUF; VACUOLAR H+-ATPASE SUBUNIT E ISOFORM 1; VHA-E1; emb2448; embryo defective 2448; vacuolar ATP synthase subunit E1", "protein_names_uniprotkb": "V-type proton ATPase subunit E1; Protein EMBRYO DEFECTIVE 2448; V-ATPase subunit E1; Vacuolar H(+)-ATPase subunit E isoform 1; Vacuolar proton pump subunit E1", "protein_names_refseq": "vacuolar ATP synthase subunit E1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G11150)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "10617198;11950611;14593172;15610355;22092075;22223895;27862469", "class_list": "", "function": "Subunit of the peripheral V1 complex of vacuolar ATPase essential for assembly or catalytic function. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells. Required for Golgi organization and vacuole function in embryogenesis., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O82502", "ec_number_list": [], "go_molecular_function": "GO:0046961 proton-transporting ATPase activity, rotational mechanism;GO:0003735 structural constituent of ribosome", "go_cellular_component": "GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain;GO:0005794 Golgi apparatus;GO:0005829 cytosol;GO:0005774 vacuolar membrane;GO:0022626 cytosolic ribosome", "go_biological_process": "GO:0009409 response to cold;GO:0007030 Golgi organization;GO:0009793 embryo development ending in seed dormancy;GO:0009832 plant-type cell wall biogenesis", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q39258-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q39261-1", "uniprot_id": [ { "id": "ZFP2_ARATH", "url": "https://www.uniprot.org/uniprot/Q39261", "type": "external" } ], "mass": 16956.0, "length": 150, "protein_name": "Zinc finger protein 2", "gene_name": "ZFP2", "organism": "Arabidopsis", "refseq_name": "zinc finger protein 2", "refseq_ac": [ { "id": "NP_200560", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_200560", "type": "external" } ], "gene_names_uniprotkb": "ZFP2; MUA2.9", "gene_names_refseq": "ATZFP2; MUA2.9; MUA2_9; ZFP2; ZINC FINGER PROTEIN 2; zinc finger protein 2", "protein_names_uniprotkb": "Zinc finger protein 2; AtZFP2", "protein_names_refseq": "zinc finger protein 2", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G57520)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "18192438;20466844;27862469;39999844;7599312;9679202", "class_list": "", "function": "Transcription factor involved in the regulation of floral organ abscission and required for seed and silique development (PubMed:18192438, PubMed:39999844). Participates in processes that directly or indirectly influence shedding of floral organs (PubMed:18192438). Supports the suppression of funiculus lignification in the secondary cell wall (SCW) in the cortex cells that surround the vasculature to ensure nutrient seed loading efficiency; this process relies on the negative regulation of SCW biosynthesis genes, including NAC043/NST1 and NAC073/SND2 by binding to their promoters (PubMed:39999844)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 13, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0003700 DNA-binding transcription factor activity;GO:0008270 zinc ion binding;GO:0043565 sequence-specific DNA binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006355 regulation of DNA-templated transcription;GO:0045892 negative regulation of DNA-templated transcription;GO:0009788 negative regulation of abscisic acid-activated signaling pathway;GO:0060862 negative regulation of floral organ abscission;GO:0080050 regulation of seed development", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q39261-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q39264-1", "uniprot_id": [ { "id": "ZFP5_ARATH", "url": "https://www.uniprot.org/uniprot/Q39264", "type": "external" } ], "mass": 23590.0, "length": 211, "protein_name": "Zinc finger protein 5", "gene_name": "ZFP5", "organism": "Arabidopsis", "refseq_name": "zinc finger protein 5", "refseq_ac": [ { "id": "NP_172518", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_172518", "type": "external" } ], "gene_names_uniprotkb": "ZFP5; T10O24.9", "gene_names_refseq": "T10O24.9; T10O24_9; ZFP5; zinc finger protein 5", "protein_names_uniprotkb": "Zinc finger protein 5", "protein_names_refseq": "zinc finger protein 5", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G10480)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "11130712;21803862;22301962;22762888;27862469;7599312", "class_list": "", "function": "Probable transcription factor required for the initiation of inflorescence trichomes in response to gibberellin (GA). Acts upstream of GIS, GIS2, ZFP8 and the trichome initiation regulators GL1 and GL3 (PubMed:21803862, PubMed:22301962). Binds the promoter region of ZFP8, which may be a direct target of ZPF5 (PubMed:21803862). Is not involved in the regulation of trichome branching (PubMed:22301962). Modulates root hair initiation and elongation in response to cytokinin and ethylene signals by directly promoting expression of the CAPRICE (CPC) gene (PubMed:22762888)., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q29PR6;Q8LCZ7", "ec_number_list": [], "go_molecular_function": "GO:0003700 DNA-binding transcription factor activity;GO:0008270 zinc ion binding;GO:0000976 transcription cis-regulatory region binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006355 regulation of DNA-templated transcription;GO:0009740 gibberellic acid mediated signaling pathway;GO:0009736 cytokinin-activated signaling pathway;GO:0009873 ethylene-activated signaling pathway", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q39264-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q3B724-1", "uniprot_id": [ { "id": "CALS5_ARATH", "url": "https://www.uniprot.org/uniprot/Q3B724", "type": "external" } ], "mass": 220661.0, "length": 1923, "protein_name": "Callose synthase 5", "gene_name": "CALS5", "organism": "Arabidopsis", "refseq_name": "callose synthase 5", "refseq_ac": [ { "id": "NP_849953", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_849953", "type": "external" } ], "gene_names_uniprotkb": "CALS5; F13J11.3; GSL2; LAP1; T10F5.22", "gene_names_refseq": "ARABIDOPSIS THALIANA GLUCAN SYNTHASE-LIKE 2; ATGSL02; CALS5; GLS2; GLUCAN SYNTHASE-LIKE 2; callose synthase 5", "protein_names_uniprotkb": "Callose synthase 5; 1,3-beta-glucan synthase; 2.4.1.34; Protein GLUCAN SYNTHASE-LIKE 2; Protein LESS ADHERENT POLLEN 1", "protein_names_refseq": "callose synthase 5", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G13680)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "10617197;11283334;15842618;16021399;16212660;27862469", "class_list": "glycogene;glycosyltransferase", "function": "Required for the formation of the callose wall separating the tetraspores (interstitial wall) and surrounding the pollen mother cells (peripheral wall). Required for exine formation on pollen wall. May be involved in callose synthesis during pollen tube growth. During plant growth and development, callose is found as a transitory component of the cell plate in dividing cells, is a major component of pollen mother cell walls and pollen tubes, and is found as a structural component of plasmodesmatal canals., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 1, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "Q8S8D4;Q8S8G9", "ec_number_list": [ { "id": "2.4.1.34", "url": "https://www.rhea-db.org/rhea/?query=ec:2.4.1.34", "type": "external" } ], "go_molecular_function": "GO:0046527 glucosyltransferase activity;GO:0003843 1,3-beta-D-glucan synthase activity", "go_cellular_component": "GO:0005886 plasma membrane;GO:0000148 1,3-beta-D-glucan synthase complex;GO:0009507 chloroplast", "go_biological_process": "GO:0008360 regulation of cell shape;GO:0006075 (1->3)-beta-D-glucan biosynthetic process;GO:0071555 cell wall organization;GO:0009555 pollen development;GO:0009556 microsporogenesis", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q3B724-1", "record_type": "protein", "filter_code": "0000000.0100101.010000.100000000000000000.0000000010000.001.11000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q3E8W4-1", "uniprot_id": [ { "id": "ANX2_ARATH", "url": "https://www.uniprot.org/uniprot/Q3E8W4", "type": "external" } ], "mass": 94297.0, "length": 858, "protein_name": "Receptor-like protein kinase ANXUR2", "gene_name": "ANX2", "organism": "Arabidopsis", "refseq_name": "Malectin/receptor-like protein kinase family protein", "refseq_ac": [ { "id": "NP_001318669", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001318669", "type": "external" } ], "gene_names_uniprotkb": "ANX2; F4I4.60", "gene_names_refseq": "ANX2; ANXUR2; F4I4.60; F4I4_60", "protein_names_uniprotkb": "Receptor-like protein kinase ANXUR2; 2.7.11.1", "protein_names_refseq": "Malectin/receptor-like protein kinase family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G28680)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "11130714;19529822;19646876;20466843;27862469;29388293", "class_list": "", "function": "Receptor-like protein kinase that controls pollen tube behavior by directing rupture at proper timing to release the sperm cell., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 4, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 4, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 4, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 4, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [ { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.3.2.27", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.2.27", "type": "external" }, { "id": "2.7.10.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.-", "type": "external" }, { "id": "3.1.4.46", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.4.46", "type": "external" }, { "id": "2.7.11.25", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.25", "type": "external" }, { "id": "2.7.11.22", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.22", "type": "external" }, { "id": "2.7.10.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.1", "type": "external" }, { "id": "2.7.11.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.-", "type": "external" }, { "id": "2.7.11.24", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.24", "type": "external" }, { "id": "2.7.12.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.1", "type": "external" }, { "id": "2.7.11.23", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.23", "type": "external" }, { "id": "2.7.12.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.2", "type": "external" }, { "id": "2.7.-.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.-.-", "type": "external" }, { "id": "3.1.26.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.26.-", "type": "external" }, { "id": "3.1.3.16", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.16", "type": "external" }, { "id": "2.7.11.34", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.34", "type": "external" }, { "id": "4.6.1.2", "url": "https://www.rhea-db.org/rhea/?query=ec:4.6.1.2", "type": "external" } ], "go_molecular_function": "GO:0004672 protein kinase activity;GO:0004674 protein serine/threonine kinase activity;GO:0005524 ATP binding;GO:0004714 transmembrane receptor protein tyrosine kinase activity;GO:0106310 protein serine kinase activity", "go_cellular_component": "GO:0005576 extracellular region;GO:0005886 plasma membrane;GO:0016324 apical plasma membrane;GO:0090404 pollen tube tip", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "Q3E8W4-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.1000000000001.100.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q3E991-1", "uniprot_id": [ { "id": "PRK6_ARATH", "url": "https://www.uniprot.org/uniprot/Q3E991", "type": "external" } ], "mass": 72637.0, "length": 659, "protein_name": "Pollen receptor-like kinase 6", "gene_name": "PRK6", "organism": "Arabidopsis", "refseq_name": "Leucine-rich repeat protein kinase family protein", "refseq_ac": [ { "id": "NP_197569", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_197569", "type": "external" } ], "gene_names_uniprotkb": "PRK6; T1M15.90", "gene_names_refseq": "PRK6; T1M15.90; T1M15_90; pollen receptor like kinase 6", "protein_names_uniprotkb": "Pollen receptor-like kinase 6; AtPRK6", "protein_names_refseq": "Leucine-rich repeat protein kinase family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G20690)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "11130714;20064227;23024212;26961657;27862469;29109411", "class_list": "", "function": "Key receptor for sensing species-specific attractants in cooperation with other pollen receptor-like kinases (PubMed:26961657). Essential for pollen tube reorientation toward attractant peptides (PubMed:26961657, PubMed:29109411)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 3, "predicted_n_glycosites": 3, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 4, "reported_mutagensis": 5, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 3, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0004674 protein serine/threonine kinase activity;GO:0005524 ATP binding;GO:0042802 identical protein binding", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005886 plasma membrane;GO:0016324 apical plasma membrane;GO:0090404 pollen tube tip", "go_biological_process": "GO:0010183 pollen tube guidance", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q3E991-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000010001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q3E9C0-1", "uniprot_id": [ { "id": "CDPKY_ARATH", "url": "https://www.uniprot.org/uniprot/Q3E9C0", "type": "external" } ], "mass": 58174.0, "length": 523, "protein_name": "Calcium-dependent protein kinase 34", "gene_name": "CPK34", "organism": "Arabidopsis", "refseq_name": "calcium-dependent protein kinase 34", "refseq_ac": [ { "id": "NP_197437", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_197437", "type": "external" } ], "gene_names_uniprotkb": "CPK34; F7K24.110", "gene_names_refseq": "AtCPK34; CPK34; F7K24.110; F7K24_110; calcium-dependent protein kinase 34", "protein_names_uniprotkb": "Calcium-dependent protein kinase 34; 2.7.11.1", "protein_names_refseq": "calcium-dependent protein kinase 34", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G19360)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "11130714;12068094;12805596;17147637;22074104;27862469", "class_list": "", "function": "May play a role in signal transduction pathways that involve calcium as a second messenger., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 4, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [ { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.3.2.27", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.2.27", "type": "external" }, { "id": "2.7.10.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.-", "type": "external" }, { "id": "3.1.4.46", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.4.46", "type": "external" }, { "id": "2.7.11.25", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.25", "type": "external" }, { "id": "2.7.11.22", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.22", "type": "external" }, { "id": "2.7.10.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.1", "type": "external" }, { "id": "2.7.11.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.-", "type": "external" }, { "id": "2.7.11.24", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.24", "type": "external" }, { "id": "2.7.12.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.1", "type": "external" }, { "id": "2.7.11.23", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.23", "type": "external" }, { "id": "2.7.12.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.2", "type": "external" }, { "id": "2.7.-.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.-.-", "type": "external" }, { "id": "3.1.26.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.26.-", "type": "external" }, { "id": "3.1.3.16", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.16", "type": "external" }, { "id": "2.7.11.34", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.34", "type": "external" }, { "id": "4.6.1.2", "url": "https://www.rhea-db.org/rhea/?query=ec:4.6.1.2", "type": "external" } ], "go_molecular_function": "GO:0009931 calcium-dependent protein serine/threonine kinase activity;GO:0004672 protein kinase activity;GO:0005516 calmodulin binding;GO:0005524 ATP binding;GO:0005509 calcium ion binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005886 plasma membrane", "go_biological_process": "GO:0035556 intracellular signal transduction;GO:0080092 regulation of pollen tube growth", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q3E9C0-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q3EBF7-1", "uniprot_id": [ { "id": "SLD2_ARATH", "url": "https://www.uniprot.org/uniprot/Q3EBF7", "type": "external" } ], "mass": 51498.0, "length": 449, "protein_name": "Delta(8)-fatty-acid desaturase 2", "gene_name": "SLD2", "organism": "Arabidopsis", "refseq_name": "Fatty acid/sphingolipid desaturase", "refseq_ac": [ { "id": "NP_182144", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_182144", "type": "external" } ], "gene_names_uniprotkb": "SLD2; T3F17.14", "gene_names_refseq": "AtSLD2; SLD2; T3F17.14; sphingoid LCB desaturase 2", "protein_names_uniprotkb": "Delta(8)-fatty-acid desaturase 2; 1.14.19.29; Delta(8)-sphingolipid desaturase 2; Sphingoid LCB desaturase 2; Sphingoid long-chain base desaturase 2; Sphingolipid 8-(E/Z)-desaturase 2", "protein_names_refseq": "Fatty acid/sphingolipid desaturase", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G46210)", "pathway_count": 1, "publication_count": 3, "publication_id_list": "10617197;22023480;27862469", "class_list": "", "function": "Plays a major role as delta(8)-fatty-acid desaturase which introduces a double bond at the 8-position in the long-chain base (LCB) of ceramides with or without a hydroxy group at the 4-position. The enzyme produces both the 8E and 8Z isomers (in a 4:1 ratio). This structural modification contributes to the quantitative partitioning of ceramides between the two major sphingolipid classes, glucosylceramides and glycosylinositolphosphoryl ceramides. Sphingolipids are important membrane components involved in environmental stress responses, such as resistance to chilling, and act as cell signaling molecules., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [ { "id": "1.14.19.29", "url": "https://www.rhea-db.org/rhea/?query=ec:1.14.19.29", "type": "external" } ], "go_molecular_function": "GO:0046872 metal ion binding;GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water;GO:0052631 sphingolipid 8-(E/Z)-desaturase activity", "go_cellular_component": "GO:0005783 endoplasmic reticulum;GO:0016020 membrane;GO:0005789 endoplasmic reticulum membrane", "go_biological_process": "GO:0070417 cellular response to cold;GO:0006629 lipid metabolic process;GO:0030148 sphingolipid biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "Q3EBF7-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q3EBM6-1", "uniprot_id": [ { "id": "PCEP4_ARATH", "url": "https://www.uniprot.org/uniprot/Q3EBM6", "type": "external" } ], "mass": 9755.0, "length": 86, "protein_name": "Precursor of CEP4", "gene_name": "CEP4", "organism": "Arabidopsis", "refseq_name": "copper amine oxidase family protein", "refseq_ac": [ { "id": "NP_001318359", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001318359", "type": "external" } ], "gene_names_uniprotkb": "CEP4; T20F21", "gene_names_refseq": "", "protein_names_uniprotkb": "Precursor of CEP4; PCEP4", "protein_names_refseq": "copper amine oxidase family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G35612)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "10617197;18315543;22303274;24179095;24179096;25324386;27862469", "class_list": "", "function": "Extracellular signaling peptide that represses primary root growth rate. Promotes shoot growth and modulates leaf morphology (PubMed:24179096). Regulates systemic nitrogen (N)-demand signaling. Mediates up-regulation of genes involved in N uptake and assimilation pathways (PubMed:25324386)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0005179 hormone activity", "go_cellular_component": "GO:0005576 extracellular region;GO:0048046 apoplast", "go_biological_process": "GO:0006970 response to osmotic stress;GO:0009651 response to salt stress;GO:0006995 cellular response to nitrogen starvation;GO:0060359 response to ammonium ion;GO:0048831 regulation of shoot system development", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q3EBM6-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q3ECH9-1", "uniprot_id": [ { "id": "CLE18_ARATH", "url": "https://www.uniprot.org/uniprot/Q3ECH9", "type": "external" } ], "mass": 11363.0, "length": 101, "protein_name": "CLAVATA3/ESR (CLE)-related protein 18", "gene_name": "CLE18", "organism": "Arabidopsis", "refseq_name": "CLAVATA3/ESR-RELATED 18", "refseq_ac": [ { "id": "NP_683472", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_683472", "type": "external" } ], "gene_names_uniprotkb": "CLE18; F15E12", "gene_names_refseq": "CLAVATA3/ESR-RELATED 18; CLE18", "protein_names_uniprotkb": "CLAVATA3/ESR (CLE)-related protein 18", "protein_names_refseq": "CLAVATA3/ESR-RELATED 18", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G66145)", "pathway_count": 1, "publication_count": 11, "publication_id_list": "11130712;11457943;12602871;16489133;16902140;18034320;18078779;20016993;22307643;27862469;28607033", "class_list": "", "function": "Extracellular signal peptide that regulates cell fate (PubMed:16489133). Represses root apical meristem maintenance (PubMed:16902140). Root growth factor that regulates the pattern of root growth and lateral root development (PubMed:22307643). Regulates the transition of protophloem cells from proliferation to differentiation, thus impinging on postembryonic growth capacity of the root meristem; this signaling pathway requires CRN and CLV2 (PubMed:28607033)., [UniProtKB, PubMed, PubMed, PubMed, PubMed]; Root growth factor that regulates the pattern of root growth and lateral root development by modulating the length and the number of cortical cells in the root apical meristem (RAM), and the anticlinal asymmetric cell divisions in lateral root initiation cells., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0033612 receptor serine/threonine kinase binding", "go_cellular_component": "GO:0048046 apoplast", "go_biological_process": "GO:0009786 regulation of asymmetric cell division;GO:0045595 regulation of cell differentiation;GO:0045168 cell-cell signaling involved in cell fate commitment;GO:0010078 maintenance of root meristem identity;GO:0010082 regulation of root meristem growth", "synthesized_glycan_count": 0, "hit_score": 1.2, "record_id": "Q3ECH9-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q3ECJ5-1", "uniprot_id": [ { "id": "CLE14_ARATH", "url": "https://www.uniprot.org/uniprot/Q3ECJ5", "type": "external" } ], "mass": 9037.0, "length": 80, "protein_name": "CLAVATA3/ESR (CLE)-related protein 14", "gene_name": "CLE14", "organism": "Arabidopsis", "refseq_name": "CLAVATA3/ESR-RELATED 14", "refseq_ac": [ { "id": "NP_001319300", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001319300", "type": "external" } ], "gene_names_uniprotkb": "CLE14; F9N12", "gene_names_refseq": "CLAVATA3/ESR-RELATED 14; CLE14", "protein_names_uniprotkb": "CLAVATA3/ESR (CLE)-related protein 14", "protein_names_refseq": "CLAVATA3/ESR-RELATED 14", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G63245)", "pathway_count": 1, "publication_count": 13, "publication_id_list": "11130712;11457943;12602871;16407446;16489133;16902140;18034320;18078779;20016993;20697738;27862469;28586647;28607033", "class_list": "", "function": "Extracellular signal peptide that regulates cell fate. Represses root apical meristem maintenance. Acts as an elicitor of the root meristem differentiation through the CLV2/CRN complex signaling pathway (PubMed:20697738, PubMed:28586647). Inhibits irreversibly root growth by reducing cell division rates in the root apical meristem (PubMed:20697738, PubMed:28586647). Regulates the transition of protophloem cells from proliferation to differentiation, thus impinging on postembryonic growth capacity of the root meristem; this signaling pathway requires CRN and CLV2 (PubMed:28607033)., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0005102 signaling receptor binding;GO:0033612 receptor serine/threonine kinase binding", "go_cellular_component": "GO:0005739 mitochondrion;GO:0048046 apoplast", "go_biological_process": "GO:0045595 regulation of cell differentiation;GO:2000377 regulation of reactive oxygen species metabolic process;GO:0016036 cellular response to phosphate starvation;GO:0045168 cell-cell signaling involved in cell fate commitment;GO:0010078 maintenance of root meristem identity", "synthesized_glycan_count": 0, "hit_score": 1.4, "record_id": "Q3ECJ5-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q3ECM0-1", "uniprot_id": [ { "id": "PCEP2_ARATH", "url": "https://www.uniprot.org/uniprot/Q3ECM0", "type": "external" } ], "mass": 14118.0, "length": 126, "protein_name": "Precursor of CEP2", "gene_name": "CEP2", "organism": "Arabidopsis", "refseq_name": "DNA-directed RNA polymerase II subunit RPB1-like protein", "refseq_ac": [ { "id": "NP_683452", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_683452", "type": "external" } ], "gene_names_uniprotkb": "CEP2; F23H11", "gene_names_refseq": "", "protein_names_uniprotkb": "Precursor of CEP2; PCEP2", "protein_names_refseq": "DNA-directed RNA polymerase II subunit RPB1-like protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G59835)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "11130712;17147637;18315543;22303274;24179095;24179096;25324386;27862469", "class_list": "", "function": "Extracellular signaling peptide that represses primary root growth rate. Negatively regulates the number of leaves and flowering, and modulates leaf morphology (PubMed:24179096). Regulates systemic nitrogen (N)-demand signaling. Mediates up-regulation of genes involved in N uptake and assimilation pathways (PubMed:25324386)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0MED5", "ec_number_list": [], "go_molecular_function": "GO:0005179 hormone activity", "go_cellular_component": "GO:0005576 extracellular region;GO:0048046 apoplast", "go_biological_process": "GO:0006970 response to osmotic stress;GO:0006995 cellular response to nitrogen starvation;GO:0060359 response to ammonium ion;GO:0048364 root development;GO:0048831 regulation of shoot system development", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "Q3ECM0-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q3ECR7-1", "uniprot_id": [ { "id": "CSTM2_ARATH", "url": "https://www.uniprot.org/uniprot/Q3ECR7", "type": "external" } ], "mass": 6680.0, "length": 62, "protein_name": "Protein CYSTEINE-RICH TRANSMEMBRANE MODULE 2", "gene_name": "CYSTM2", "organism": "Arabidopsis", "refseq_name": "cadmium tolerance 1", "refseq_ac": [ { "id": "NP_974010", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_974010", "type": "external" } ], "gene_names_uniprotkb": "CYSTM2; CDT1; F14G24", "gene_names_refseq": "ATCDT1; CADMIUM TOLERANCE 1; CDT1", "protein_names_uniprotkb": "Protein CYSTEINE-RICH TRANSMEMBRANE MODULE 2; AtCDT1; AthCYSTM2; Cd tolerant 1; Protein CADMIUM TOLERANCE 1", "protein_names_refseq": "cadmium tolerance 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G52827)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "11130712;19017626;19816106;27862469;29272523", "class_list": "", "function": "Confers resistance to heavy metal ions (e.g. cadmium (CdCl(2)) and copper (CuCl(2))) by chelating them at the plasma membrane of root cells, thus stopping their entry and reducing their accumulation., [UniProtKB, PubMed]; Involved in resistance to abiotic stress., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "F4IEL4", "ec_number_list": [], "go_molecular_function": "GO:0046872 metal ion binding;GO:0140487 metal ion sequestering activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005886 plasma membrane;GO:0009505 plant-type cell wall", "go_biological_process": "GO:0010273 detoxification of copper ion;GO:0071585 detoxification of cadmium ion;GO:1990748 cellular detoxification", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q3ECR7-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q3ECS3-1", "uniprot_id": [ { "id": "BGL35_ARATH", "url": "https://www.uniprot.org/uniprot/Q3ECS3", "type": "external" } ], "mass": 57468.0, "length": 511, "protein_name": "Myrosinase 5", "gene_name": "TGG5", "organism": "Arabidopsis", "refseq_name": "beta glucosidase 35", "refseq_ac": [ { "id": "NP_175558", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_175558", "type": "external" } ], "gene_names_uniprotkb": "TGG5; BGLU35; F5D21.17", "gene_names_refseq": "BGLU35; F5D21.17; F5D21_17; TGG5; THIOGLUCOSIDE GLUCOHYDROLASE 5; beta glucosidase 35", "protein_names_uniprotkb": "Myrosinase 5; 3.2.1.147; 3.2.1.21; AtBGLU35; Beta-glucosidase 35; Sinigrinase 5; Thioglucosidase 5", "protein_names_refseq": "beta glucosidase 35", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G51470)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "11130712;15604686;19703694;27862469", "class_list": "glycogene;glycosylhydrolase", "function": "Hydrolyzes sinigrin and, with lower efficiency, p-nitrophenyl beta-D-glucoside., [UniProtKB, PubMed]", "predicted_glycosites": 6, "predicted_n_glycosites": 5, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 6, "binding_glycan_count": 0, "secondary_ac_list": "Q9C8J9", "ec_number_list": [], "go_molecular_function": "GO:0008422 beta-glucosidase activity;GO:0019137 thioglucosidase activity", "go_cellular_component": "GO:0005576 extracellular region", "go_biological_process": "GO:0005975 carbohydrate metabolic process", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "Q3ECS3-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000011000.001.10100", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q3ED78-1", "uniprot_id": [ { "id": "C3H7_ARATH", "url": "https://www.uniprot.org/uniprot/Q3ED78", "type": "external" } ], "mass": 53768.0, "length": 470, "protein_name": "Zinc finger CCCH domain-containing protein 7", "gene_name": "F24J8.21", "organism": "Arabidopsis", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "F24J8.21", "gene_names_refseq": "", "protein_names_uniprotkb": "Zinc finger CCCH domain-containing protein 7; 3.1.-.-; AtC3H7; AtSmicl", "protein_names_refseq": "", "tax_id": 3702, "disease": "", "pathway": "", "pathway_count": 0, "publication_count": 4, "publication_id_list": "11130712;18221561;18582464;27862469", "class_list": "", "function": "Possesses RNA-binding and ribonuclease activities in vitro., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 15, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "F4HY24;Q0WQL3;Q9LPK3", "ec_number_list": [], "go_molecular_function": "GO:0003677 DNA binding;GO:0003723 RNA binding;GO:0008270 zinc ion binding;GO:0016787 hydrolase activity;GO:0004518 nuclease activity", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "Q3ED78-1", "record_type": "protein", "filter_code": "0000000.0100100.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q3EDG5-1", "uniprot_id": [ { "id": "TPST_ARATH", "url": "https://www.uniprot.org/uniprot/Q3EDG5", "type": "external" } ], "mass": 56989.0, "length": 500, "protein_name": "Protein-tyrosine sulfotransferase", "gene_name": "TPST", "organism": "Arabidopsis", "refseq_name": "tyrosylprotein sulfotransferase", "refseq_ac": [ { "id": "NP_001320287", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001320287", "type": "external" } ], "gene_names_uniprotkb": "TPST; T6D22.29", "gene_names_refseq": "AQC1; HPS7; T6D22.29; T6D22_29; TPST; active quiescent center1; hypersensitive to Pi starvation 7; tyrosylprotein sulfotransferase", "protein_names_uniprotkb": "Protein-tyrosine sulfotransferase; 2.8.2.20; Tyrosylprotein sulfotransferase", "protein_names_refseq": "tyrosylprotein sulfotransferase", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G08030)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "11130712;14993207;19666544;27862469", "class_list": "", "function": "Catalyzes the O-sulfation of tyrosine residues within acidic motifs of polypeptides., [UniProtKB, PubMed]", "predicted_glycosites": 6, "predicted_n_glycosites": 6, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 6, "binding_glycan_count": 0, "secondary_ac_list": "C7G3K4;Q9LN06", "ec_number_list": [ { "id": "2.8.2.20", "url": "https://www.rhea-db.org/rhea/?query=ec:2.8.2.20", "type": "external" } ], "go_molecular_function": "GO:0017095 heparan sulfate 6-sulfotransferase activity;GO:0008476 protein-tyrosine sulfotransferase activity", "go_cellular_component": "GO:0000139 Golgi membrane;GO:0005768 endosome;GO:0005794 Golgi apparatus;GO:0005802 trans-Golgi network", "go_biological_process": "GO:0045087 innate immune response;GO:0019827 stem cell population maintenance;GO:0010468 regulation of gene expression;GO:0015012 heparan sulfate proteoglycan biosynthetic process;GO:0055070 copper ion homeostasis", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "Q3EDG5-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000010001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q3MV14-1", "uniprot_id": [ { "id": "DSE1_ARATH", "url": "https://www.uniprot.org/uniprot/Q3MV14", "type": "external" } ], "mass": 41986.0, "length": 386, "protein_name": "Protein DECREASED SIZE EXCLUSION LIMIT 1", "gene_name": "DSE1", "organism": "Arabidopsis", "refseq_name": "Transducin/WD40 repeat-like superfamily protein", "refseq_ac": [ { "id": "NP_194715", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_194715", "type": "external" } ], "gene_names_uniprotkb": "DSE1; ALT2; EMB2757; F27B13.100; TAN", "gene_names_refseq": "ALT2; ALUMINUM TOLERANT 2; AtDSE1; DECREASED SIZE EXCLUSION LIMIT 1; DSE1; EMB2757; EMBRYO DEFECTIVE 2757; F27B13.100; F27B13_100; TANMEI; TAN", "protein_names_uniprotkb": "Protein DECREASED SIZE EXCLUSION LIMIT 1; AtDSE1; Protein ALUMINUM TOLERANT 2; Protein EMBRYO DEFECTIVE 2757; Protein TANMEI", "protein_names_refseq": "Transducin/WD40 repeat-like superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G29860)", "pathway_count": 1, "publication_count": 17, "publication_id_list": "10617198;11910074;15266054;16113228;18463617;20466843;21768351;22345493;22411811;23328941;23572148;23660473;23776212;25561503;27862469;28011693;30833711", "class_list": "", "function": "Involved in the formation of X-, Y-shaped and twinned plasmodesmata (PD), thus modelating PD size exclusion limit and regulating cell-to-cell transport (PubMed:22411811). Cell cycle checkpoint regulator that monitors and responds to DNA damage such as DNA cross-links, and triggers the halt of the cell cycle progression in the presence of DNA cross-linking agents. Mediates the active process of aluminum- (Al) dependent root growth inhibition and thus is required for response to Al toxicity (PubMed:22345493). Required for both early and late phases of embryo development as well as during seedling growth (PubMed:15266054, PubMed:16113228). Essential for signal transduction and development of both male and female organs (PubMed:22411811)., [UniProtKB, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 6, "reported_mutagensis": 2, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q8GW99;Q9SZQ7", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0080008 Cul4-RING E3 ubiquitin ligase complex", "go_biological_process": "GO:0006974 DNA damage response;GO:0010044 response to aluminum ion;GO:0051726 regulation of cell cycle;GO:0006282 regulation of DNA repair;GO:0072718 response to cisplatin", "synthesized_glycan_count": 0, "hit_score": 1.8, "record_id": "Q3MV14-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q3S4A7-1", "uniprot_id": [ { "id": "AHK5_ARATH", "url": "https://www.uniprot.org/uniprot/Q3S4A7", "type": "external" } ], "mass": 103637.0, "length": 922, "protein_name": "Histidine kinase 5", "gene_name": "AHK5", "organism": "Arabidopsis", "refseq_name": "histidine kinase 5", "refseq_ac": [ { "id": "NP_196633", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_196633", "type": "external" } ], "gene_names_uniprotkb": "AHK5; CKI2; MAJ23.80", "gene_names_refseq": "AHK5; CKI2; CYTOKININ INDEPENDENT 2; HK5; MAJ23.80; MAJ23_80; histidine kinase 5", "protein_names_uniprotkb": "Histidine kinase 5; 2.7.13.3; Arabidopsis histidine kinase 5; AtHK5; Protein AUTHENTIC HIS-KINASE 5; Protein CYTOKININ-INDEPENDENT 2", "protein_names_refseq": "histidine kinase 5", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G10720)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "11130714;17202180;18077346;18560512;22256998;22827948;23132142;27862469", "class_list": "", "function": "Functions as a histidine kinase and transmits the stress signal to a downstream MAPK cascade. This protein undergoes an ATP-dependent autophosphorylation at a conserved histidine residue in the kinase core, and a phosphoryl group is then transferred to a conserved aspartate residue in the receiver domain. Negative regulator of the ETR1-dependent abscisic acid (ABA) and ethylene signaling pathway that inhibits the root elongation. Promotes stomatal closure. Regulates stomatal opening by integrating multiple signals via hydrogen peroxide H(2)O(2) homeostasis in guard cells in an ABA-independent manner. May contribute to basal defense mechanisms by closing stomata in the presence of bacterial pathogens. Regulates both hormone levels and ROS production in response to stress. Required for full immunity to bacterial pathogen and necrotrophic fungus., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9FT60", "ec_number_list": [], "go_molecular_function": "GO:0046872 metal ion binding;GO:0000155 phosphorelay sensor kinase activity;GO:0004673 protein histidine kinase activity;GO:0009927 histidine phosphotransfer kinase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005886 plasma membrane;GO:0000325 plant-type vacuole", "go_biological_process": "GO:0006952 defense response;GO:0070301 cellular response to hydrogen peroxide;GO:0071732 cellular response to nitric oxide;GO:0071219 cellular response to molecule of bacterial origin;GO:0000160 phosphorelay signal transduction system", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "Q3S4A7-1", "record_type": "protein", "filter_code": "0000000.0000101.010000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q41188-1", "uniprot_id": [ { "id": "CSP2_ARATH", "url": "https://www.uniprot.org/uniprot/Q41188", "type": "external" } ], "mass": 19153.0, "length": 203, "protein_name": "Cold shock protein 2", "gene_name": "CSP2", "organism": "Arabidopsis", "refseq_name": "glycine rich protein 2", "refseq_ac": [ { "id": "NP_195580", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_195580", "type": "external" } ], "gene_names_uniprotkb": "CSP2; CSDP2; F20M13.240; GRP2", "gene_names_refseq": "ARABIDOPSIS THALIANA COLD SHOCK PROTEIN 2; ATCSP2; COLD SHOCK DOMAIN PROTEIN 2; COLD SHOCK PROTEIN 2; CSDP2; CSP2; GRP-2; GRP2; T9A14.9; glycine rich protein 2", "protein_names_uniprotkb": "Cold shock protein 2; AtCSP2; AtGRP2; Cold shock domain-containing protein 2; Glycine-rich protein 2", "protein_names_refseq": "glycine rich protein 2", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G38680)", "pathway_count": 1, "publication_count": 16, "publication_id_list": "10617198;12529510;14593172;17123099;17169986;17376161;17963727;19258348;19269998;19423640;2152168;23111157;26091701;27862469;28011693;29167316", "class_list": "", "function": "Chaperone that binds to RNA, single- (ssDNA) and double-stranded (dsDNA) DNA, and unwinds nucleic acid duplex. Accelerates seed germination and seedling growth under cold stress, and contributes to enhancement of cold and freezing tolerance. Regulates flowering transition, and flower and seed development. Promotes seed germination under salt stress. May regulate respiratory oxygen uptake., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 3, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "C0Z2E8", "ec_number_list": [], "go_molecular_function": "GO:0003729 mRNA binding;GO:0008270 zinc ion binding;GO:0003676 nucleic acid binding;GO:0003690 double-stranded DNA binding;GO:0003697 single-stranded DNA binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005730 nucleolus;GO:0005737 cytoplasm;GO:0005829 cytosol;GO:0005886 plasma membrane", "go_biological_process": "GO:0043457 regulation of cellular respiration;GO:0009409 response to cold;GO:0009631 cold acclimation;GO:0009414 response to water deprivation;GO:0009269 response to desiccation", "synthesized_glycan_count": 0, "hit_score": 1.7, "record_id": "Q41188-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9ZVS2-1", "uniprot_id": [ { "id": "Q9ZVS2_ARATH", "url": "https://www.uniprot.org/uniprot/Q9ZVS2", "type": "external" } ], "mass": 31710.0, "length": 286, "protein_name": "Phenazine biosynthesis PhzC/PhzF protein", "gene_name": "F15K9.19; F15K9_19", "organism": "Arabidopsis", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "F15K9.19; F15K9_19", "gene_names_refseq": "", "protein_names_uniprotkb": "Phenazine biosynthesis PhzC/PhzF protein", "protein_names_refseq": "", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G03210)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "11130712;27862469", "class_list": "", "function": "", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0016853 isomerase activity", "go_cellular_component": "GO:0005737 cytoplasm", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "Q9ZVS2-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9ZW72-1", "uniprot_id": [ { "id": "CARK6_ARATH", "url": "https://www.uniprot.org/uniprot/Q9ZW72", "type": "external" } ], "mass": 45366.0, "length": 406, "protein_name": "Protein CYTOSOLIC ABA RECEPTOR KINASE 6", "gene_name": "CARK6", "organism": "Arabidopsis", "refseq_name": "Protein kinase superfamily protein", "refseq_ac": [ { "id": "NP_565995", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_565995", "type": "external" } ], "gene_names_uniprotkb": "CARK6; F14B2.17", "gene_names_refseq": "F14B2.17", "protein_names_uniprotkb": "Protein CYTOSOLIC ABA RECEPTOR KINASE 6; 2.7.10.-; PTI1-like tyrosine-protein kinase CARK6; RLCK CARK6; Receptor-like cytoplasmic kinase CARK6", "protein_names_refseq": "Protein kinase superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G43230)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "10617197;14593172;27862469;30967269;33909893;35388459;39673241", "class_list": "", "function": "Receptor-like cytoplasmic kinase (RLCK) that triggers abscisic acid (ABA) signaling in response to dehydration by phosphorylating and activating ABA receptors to support their monomerization and enhance their ABA binding affinity; they in turn repress PP2C protein phosphatases acting as negative regulators of ABA responses (PubMed:30967269). In response to abiotic stress, promotes drought resistance, and triggers adaptations such as the inhibition of seed germination and of root elongation (PubMed:30967269). Negative regulator of the reactive oxygen stress (ROS) signaling mediated by the kinase OXI1 in response to pathogen-associated molecular patterns (PAMPs, e.g. flagellin), and associated with specific genes expression (PubMed:39673241)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 14, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "Q93XZ0", "ec_number_list": [ { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.3.2.27", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.2.27", "type": "external" }, { "id": "2.7.10.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.-", "type": "external" }, { "id": "3.1.4.46", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.4.46", "type": "external" }, { "id": "2.7.11.25", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.25", "type": "external" }, { "id": "2.7.10.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.2", "type": "external" }, { "id": "2.7.11.22", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.22", "type": "external" }, { "id": "2.7.10.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.1", "type": "external" }, { "id": "2.7.11.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.-", "type": "external" }, { "id": "2.7.11.24", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.24", "type": "external" }, { "id": "2.7.12.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.1", "type": "external" }, { "id": "2.7.11.23", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.23", "type": "external" }, { "id": "2.7.12.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.2", "type": "external" }, { "id": "2.7.-.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.-.-", "type": "external" }, { "id": "3.1.26.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.26.-", "type": "external" }, { "id": "3.1.3.16", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.16", "type": "external" }, { "id": "2.7.11.34", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.34", "type": "external" }, { "id": "4.6.1.2", "url": "https://www.rhea-db.org/rhea/?query=ec:4.6.1.2", "type": "external" } ], "go_molecular_function": "GO:0004713 protein tyrosine kinase activity;GO:0005524 ATP binding;GO:0019901 protein kinase binding;GO:0046872 metal ion binding;GO:0019900 kinase binding", "go_cellular_component": "GO:0005886 plasma membrane;GO:0005634 nucleus", "go_biological_process": "GO:0009738 abscisic acid-activated signaling pathway;GO:0010029 regulation of seed germination;GO:0090333 regulation of stomatal closure;GO:2000070 regulation of response to water deprivation;GO:2000280 regulation of root development", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q9ZW72-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000001001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q6PQQ3-1", "uniprot_id": [ { "id": "AIL5_ARATH", "url": "https://www.uniprot.org/uniprot/Q6PQQ3", "type": "external" } ], "mass": 60306.0, "length": 558, "protein_name": "AP2-like ethylene-responsive transcription factor AIL5", "gene_name": "AIL5", "organism": "Arabidopsis", "refseq_name": "AINTEGUMENTA-like 5", "refseq_ac": [ { "id": "NP_200549", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_200549", "type": "external" } ], "gene_names_uniprotkb": "AIL5; AINTEGUMENTA-like 5; CHO1; CHOTTO 1; EMBRYOMAKER; EMK; MSF19.5; MSF19_5; PLETHORA 5; PLT5", "gene_names_refseq": "AIL5; AINTEGUMENTA-like 5; CHO1; CHOTTO 1; EMBRYOMAKER; EMK; MSF19.5; MSF19_5; PLETHORA 5; PLT5", "protein_names_uniprotkb": "AP2-like ethylene-responsive transcription factor AIL5; Protein AINTEGUMENTA-LIKE 5", "protein_names_refseq": "AINTEGUMENTA-like 5", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G57390)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "10048488;11130714;15988559;16407444;27862469", "class_list": "", "function": "Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). Involved in the regulation of floral organs size (PubMed:15988559)., [UniProtKB, UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9FIE2", "ec_number_list": [], "go_molecular_function": "GO:0003677 DNA binding;GO:0003700 DNA-binding transcription factor activity;GO:0000976 transcription cis-regulatory region binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006355 regulation of DNA-templated transcription;GO:0009791 post-embryonic development;GO:0040019 positive regulation of embryonic development;GO:0009845 seed germination", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q6PQQ3-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9SZI3-1", "uniprot_id": [ { "id": "NPR2_ARATH", "url": "https://www.uniprot.org/uniprot/Q9SZI3", "type": "external" } ], "mass": 68006.0, "length": 600, "protein_name": "Regulatory protein NPR2", "gene_name": "NPR2", "organism": "Arabidopsis", "refseq_name": "Ankyrin repeat family protein / BTB/POZ domain-containing protein", "refseq_ac": [ { "id": "NP_194342", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_194342", "type": "external" } ], "gene_names_uniprotkb": "NPR2; F20B18.230; F20B18_230", "gene_names_refseq": "F20B18.230; F20B18_230", "protein_names_uniprotkb": "Regulatory protein NPR2; BTB/POZ domain-containing protein NPR2", "protein_names_refseq": "Ankyrin repeat family protein / BTB/POZ domain-containing protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G26120)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "10617198;15634206;15749712;22699612;27862469", "class_list": "", "function": "Salicylic acid (SA)-binding substrate-specific adapter of an E3 ubiquitin-protein ligase complex (CUL3-RBX1-BTB) which mediates the ubiquitination and subsequent proteasomal degradation of target proteins (By similarity). Transcription cofactor that represses gene expression in the absence of salicylic acid (SA), when attached to negative cis-elements (W-box) with WRKY transcription factors, but stimulates gene expression upon activation by SA, when sumoylated and attached to positive cis-elements (as-1) with TGA transcription factors, thus confering immunity through a series of gene regulations ending in a significant increase in antimicrobial and defense genes expression (By similarity). May be involved in regulating basal defense responses against pathogens, and may be involved in crosstalk between SA- and JA-dependent signaling pathways (By similarity)., [UniProtKB, UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0008270 zinc ion binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0016604 nuclear body", "go_biological_process": "GO:0045087 innate immune response;GO:0016567 protein ubiquitination;GO:0042742 defense response to bacterium;GO:0050832 defense response to fungus;GO:0031347 regulation of defense response", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q9SZI3-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8LFL8-1", "uniprot_id": [ { "id": "LSM1B_ARATH", "url": "https://www.uniprot.org/uniprot/Q8LFL8", "type": "external" } ], "mass": 14693.0, "length": 128, "protein_name": "Sm-like protein LSM1B", "gene_name": "LSM1B", "organism": "Arabidopsis", "refseq_name": "Small nuclear ribonucleoprotein family protein", "refseq_ac": [ { "id": "NP_001326377", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001326377", "type": "external" } ], "gene_names_uniprotkb": "LSM1B; LSM1; MAG2.4; SM-like 1B", "gene_names_refseq": "LSM1B; SM-like 1B", "protein_names_uniprotkb": "Sm-like protein LSM1B; AtLSM1b", "protein_names_refseq": "Small nuclear ribonucleoprotein family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G14080)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "10907853;11130713;14593172;23221597;23620288;27862469", "class_list": "", "function": "Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation by promoting decapping and leading to accurate 5'-3' mRNA decay. LSM1A and LSM1B are essential for the formation of the cytoplasmic LSM1-LSM7 complex which regulates developmental gene expression by the decapping of specific development-related transcripts (PubMed:23221597, PubMed:23620288). Required for P-body formation during heat stress (PubMed:23221597)., [UniProtKB, PubMed, PubMed, UniProtKB, UniProtKB]; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9LJI0", "ec_number_list": [], "go_molecular_function": "GO:0003723 RNA binding;GO:0003729 mRNA binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005829 cytosol;GO:0000932 P-body;GO:1990904 ribonucleoprotein complex;GO:1990726 Lsm1-7-Pat1 complex", "go_biological_process": "GO:0000290 deadenylation-dependent decapping of nuclear-transcribed mRNA;GO:0006397 mRNA processing;GO:0009631 cold acclimation;GO:0009414 response to water deprivation;GO:0042538 hyperosmotic salinity response", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q8LFL8-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q56XP4-1", "uniprot_id": [ { "id": "NHX2_ARATH", "url": "https://www.uniprot.org/uniprot/Q56XP4", "type": "external" } ], "mass": 60523.0, "length": 546, "protein_name": "Sodium/hydrogen exchanger 2", "gene_name": "NHX2", "organism": "Arabidopsis", "refseq_name": "sodium hydrogen exchanger 2", "refseq_ac": [ { "id": "NP_001319475", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001319475", "type": "external" } ], "gene_names_uniprotkb": "NHX2; ATNHX2; T9J14.2; T9J14_2; sodium hydrogen exchanger 2", "gene_names_refseq": "ATNHX2; NHX2; T9J14.2; T9J14_2; sodium hydrogen exchanger 2", "protein_names_uniprotkb": "Sodium/hydrogen exchanger 2; NHE-2; Na(+)/H(+) exchanger 2", "protein_names_refseq": "sodium hydrogen exchanger 2", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G05030)", "pathway_count": 1, "publication_count": 23, "publication_id_list": "11130713;12047628;18463617;18686298;19688752;20374526;20466843;22060019;23111157;23328941;23572148;23660473;23776212;23820729;24043427;25561503;26091701;26187819;27419465;27532006;27862469;29167316;30833711", "class_list": "", "function": "Acts in low affinity electroneutral exchange of protons for cations such as Na(+) or K(+) across membranes. May also exchange Li(+) and Cs(+) with a lower affinity. Involved in vacuolar ion compartmentalization necessary for cell volume regulation and cytoplasmic Na(+) detoxification., [UniProtKB, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 1, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 5, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "Q9CAW6", "ec_number_list": [], "go_molecular_function": "GO:0015385 sodium:proton antiporter activity;GO:0015386 potassium:proton antiporter activity", "go_cellular_component": "GO:0005739 mitochondrion;GO:0005829 cytosol;GO:0005886 plasma membrane;GO:0005774 vacuolar membrane;GO:0016020 membrane", "go_biological_process": "GO:0055075 potassium ion homeostasis;GO:0051453 regulation of intracellular pH;GO:1990573 potassium ion import across plasma membrane;GO:0071805 potassium ion transmembrane transport;GO:0098719 sodium ion import across plasma membrane", "synthesized_glycan_count": 0, "hit_score": 2.4, "record_id": "Q56XP4-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000010001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q6X7J4-1", "uniprot_id": [ { "id": "WOX9_ARATH", "url": "https://www.uniprot.org/uniprot/Q6X7J4", "type": "external" } ], "mass": 42089.0, "length": 378, "protein_name": "WUSCHEL-related homeobox 9", "gene_name": "HB-3; WOX9", "organism": "Arabidopsis", "refseq_name": "homeobox-3", "refseq_ac": [ { "id": "NP_180944", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_180944", "type": "external" } ], "gene_names_uniprotkb": "HB-3; WOX9; STIMPY; STIP; T1B8.31; T1B8_31; WOX9A; WOX9; WUSCHEL related homeobox 9A; WUSCHEL-RELATED HOMEOBOX 9; homeobox-3", "gene_names_refseq": "HB-3; STIMPY; STIP; T1B8.31; T1B8_31; WOX9A; WOX9; WUSCHEL related homeobox 9A; WUSCHEL-RELATED HOMEOBOX 9; homeobox-3", "protein_names_uniprotkb": "WUSCHEL-related homeobox 9; Protein STIMPY", "protein_names_refseq": "homeobox-3", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G33880)", "pathway_count": 1, "publication_count": 11, "publication_id_list": "10617197;11910074;14593172;14711878;15753038;17706632;20110319;21057190;21185286;21316593;27862469", "class_list": "", "function": "Homeodomain transcription factor required for meristem growth and early development (PubMed:15753038). Promotes cell proliferation and prevents premature differentiation in meristematic tissues during postembryonic development (PubMed:15753038). Essential for maintaining tissue growth during embryogenesis (PubMed:17706632). May act by repressing TSS to promote meristematic proliferation (PubMed:21185286). Involved in the transcriptional activation of a subset of cytokinin response factors (PubMed:20110319). May act as a negative regulator of cytokinin signaling in the dark (PubMed:21057190)., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O23662;Q8GX13", "ec_number_list": [], "go_molecular_function": "GO:0003700 DNA-binding transcription factor activity;GO:0000976 transcription cis-regulatory region binding;GO:0003677 DNA binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0008284 positive regulation of cell population proliferation;GO:0009793 embryo development ending in seed dormancy;GO:0010075 regulation of meristem growth;GO:0048731 system development", "synthesized_glycan_count": 0, "hit_score": 1.2, "record_id": "Q6X7J4-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9AT61-1", "uniprot_id": [ { "id": "LBD13_ARATH", "url": "https://www.uniprot.org/uniprot/Q9AT61", "type": "external" } ], "mass": 29091.0, "length": 268, "protein_name": "LOB domain-containing protein 13", "gene_name": "LBD13", "organism": "Arabidopsis", "refseq_name": "LOB domain-containing protein 13", "refseq_ac": [ { "id": "NP_850141", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_850141", "type": "external" } ], "gene_names_uniprotkb": "LBD13; ASL10; T9D9.15; T9D9_15", "gene_names_refseq": "LBD13; LOB domain-containing protein 13; T9D9.15; T9D9_15", "protein_names_uniprotkb": "LOB domain-containing protein 13; AS2-like protein 10; ASYMMETRIC LEAVES 2-like protein 10", "protein_names_refseq": "LOB domain-containing protein 13", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G30340)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "10617197;12040093;12068116;12481096;19154202;27862469", "class_list": "", "function": "", "predicted_glycosites": 2, "predicted_n_glycosites": 0, "predicted_o_glycosites": 2, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 2, "binding_glycan_count": 0, "secondary_ac_list": "B7XG64;O22930;Q147P1;Q8W1D8", "ec_number_list": [], "go_molecular_function": "GO:0001216 DNA-binding transcription activator activity", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006355 regulation of DNA-templated transcription;GO:0045893 positive regulation of DNA-templated transcription;GO:0010311 lateral root formation", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q9AT61-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q940D0-1", "uniprot_id": [ { "id": "ARR1_ARATH", "url": "https://www.uniprot.org/uniprot/Q940D0", "type": "external" } ], "mass": 75177.0, "length": 690, "protein_name": "Two-component response regulator ARR1", "gene_name": "ARR1; RR1", "organism": "Arabidopsis", "refseq_name": "response regulator 1", "refseq_ac": [ { "id": "NP_566561", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_566561", "type": "external" } ], "gene_names_uniprotkb": "ARR1; RR1; ARR1; K20I9.9; MUH15.1; response regulator 1", "gene_names_refseq": "ARR1; RR1; response regulator 1", "protein_names_uniprotkb": "Two-component response regulator ARR1", "protein_names_refseq": "response regulator 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G16857)", "pathway_count": 1, "publication_count": 20, "publication_id_list": "10819329;10907853;11130713;11135105;11574878;11691951;14593172;14981318;15173562;17363254;19039136;19423640;20605455;23111157;23776212;24924143;25561503;27862469;30833711;9891419", "class_list": "", "function": "Transcriptional activator that binds specific DNA sequence., [UniProtKB, UniProtKB]; Transcriptional activator that binds specifically to the DNA sequence 5'-[AG]GATT-3'. Functions as a response regulator involved in His-to-Asp phosphorelay signal transduction system. Phosphorylation of the Asp residue in the receiver domain activates the ability of the protein to promote the transcription of target genes. Could directly activate some type-A response regulators in response to cytokinins. Regulates SHY2 by binding to its promoter (PubMed:19039136). Involved in the root-meristem size determination through the regulation of cell differentiation (PubMed:17363254)., [UniProtKB, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 12, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "B9DFS4;Q9LIB7;Q9ZWK0", "ec_number_list": [], "go_molecular_function": "GO:0003700 DNA-binding transcription factor activity;GO:0000976 transcription cis-regulatory region binding;GO:0000156 phosphorelay response regulator activity;GO:0003677 DNA binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005829 cytosol;GO:0009507 chloroplast", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0009414 response to water deprivation;GO:0009736 cytokinin-activated signaling pathway;GO:0009735 response to cytokinin;GO:0010082 regulation of root meristem growth", "synthesized_glycan_count": 0, "hit_score": 2.1, "record_id": "Q940D0-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q6X5Y6-1", "uniprot_id": [ { "id": "WRI1_ARATH", "url": "https://www.uniprot.org/uniprot/Q6X5Y6", "type": "external" } ], "mass": 48436.0, "length": 430, "protein_name": "Ethylene-responsive transcription factor WRI1", "gene_name": "WRI1", "organism": "Arabidopsis", "refseq_name": "Integrase-type DNA-binding superfamily protein", "refseq_ac": [ { "id": "NP_001030857", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001030857", "type": "external" } ], "gene_names_uniprotkb": "WRI1; ACTIVATOR OF SPO(MIN)::LUC1; ASML1; ATWRI1; T12E18.10; T12E18.20; WRINKLED 1; WRINKLED; WRI", "gene_names_refseq": "ACTIVATOR OF SPO(MIN)::LUC1; ASML1; ATWRI1; WRI1; WRINKLED 1; WRINKLED; WRI", "protein_names_uniprotkb": "Ethylene-responsive transcription factor WRI1; Protein ACTIVATOR OF SPORAMIN::LUC 1; Protein WRINKLED 1", "protein_names_refseq": "Integrase-type DNA-binding superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G54320)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "11130713;12084821;15500472;15753106;16407444;16553903;16632590;27862469;28314829;9733529", "class_list": "", "function": "May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). Transcriptional activator involved in the activation of a subset of sugar-responsive genes and the control of carbon flow from sucrose import to oil accumulation in developing seeds. Binds to the GCC-box pathogenesis-related promoter element. Promotes sugar uptake and seed oil accumulation by glycolysis. Required for embryo development, seed germination and, indirectly, for seedling establishment. Negative regulator of the ABA-mediated germination inhibition., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 4, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q2V3P6;Q6J9N7;Q9M2V3;Q9M2V4", "ec_number_list": [], "go_molecular_function": "GO:0003677 DNA binding;GO:0003700 DNA-binding transcription factor activity;GO:0019900 kinase binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006109 regulation of carbohydrate metabolic process;GO:0006110 regulation of glycolytic process;GO:0006351 DNA-templated transcription;GO:0006629 lipid metabolic process;GO:0008610 lipid biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "Q6X5Y6-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q93XX2-1", "uniprot_id": [ { "id": "SEOA_ARATH", "url": "https://www.uniprot.org/uniprot/Q93XX2", "type": "external" } ], "mass": 94217.0, "length": 822, "protein_name": "Protein SIEVE ELEMENT OCCLUSION A", "gene_name": "SEOA", "organism": "Arabidopsis", "refseq_name": "sieve element occlusion protein", "refseq_ac": [ { "id": "NP_001325831", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001325831", "type": "external" } ], "gene_names_uniprotkb": "SEOA; AtSEOR2; F4P13.21; F4P13_21; SEOR2; SEOa; sieve element occlusion a", "gene_names_refseq": "Arabidopsis thaliana sieve element occlusion-related 2; AtSEOR2; F4P13.21; F4P13_21; SEOR2; SEOa; sieve element occlusion a; sieve element occlusion-related 2", "protein_names_uniprotkb": "Protein SIEVE ELEMENT OCCLUSION A; AtSEOR2; AtSEOa; Protein SIEVE ELEMENT OCCLUSION-RELATED 2", "protein_names_refseq": "sieve element occlusion protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G01670)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "11130713;14593172;20932300;21768351;22470058;23111157;23328941;25561503;27862469;29654922", "class_list": "", "function": "Scaffold protein required to form the phloem filament matrix in sieve elements., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 7, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9SS88", "ec_number_list": [], "go_molecular_function": "GO:0042803 protein homodimerization activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005829 cytosol;GO:0009507 chloroplast;GO:0097218 sieve plate", "go_biological_process": "GO:0010088 phloem development", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "Q93XX2-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9LUS8-1", "uniprot_id": [ { "id": "P2C40_ARATH", "url": "https://www.uniprot.org/uniprot/Q9LUS8", "type": "external" } ], "mass": 53614.0, "length": 493, "protein_name": "Probable protein phosphatase 2C 40", "gene_name": "MDC8.3", "organism": "Arabidopsis", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "MDC8.3; MDC8.3", "gene_names_refseq": "", "protein_names_uniprotkb": "Probable protein phosphatase 2C 40; 3.1.3.16; AtPP2C40; Protein phosphatase 2C homolog 1", "protein_names_refseq": "", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G16560)", "pathway_count": 1, "publication_count": 11, "publication_id_list": "10819329;11130713;14593172;19021904;21768351;22438062;23111157;23776212;25561503;27862469;30833711", "class_list": "", "function": "", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q8LCU0", "ec_number_list": [ { "id": "3.1.3.16", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.16", "type": "external" }, { "id": "3.1.3.27", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.27", "type": "external" }, { "id": "3.1.3.48", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.48", "type": "external" }, { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.7.13.3", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.13.3", "type": "external" } ], "go_molecular_function": "GO:0046872 metal ion binding;GO:0004722 protein serine/threonine phosphatase activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005739 mitochondrion", "go_biological_process": "GO:0007165 signal transduction", "synthesized_glycan_count": 0, "hit_score": 1.2, "record_id": "Q9LUS8-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q5D892-1", "uniprot_id": [ { "id": "MER3_ARATH", "url": "https://www.uniprot.org/uniprot/Q5D892", "type": "external" } ], "mass": 128290.0, "length": 1133, "protein_name": "ATP-dependent DNA helicase homolog MER3", "gene_name": "MER3; RCK", "organism": "Arabidopsis", "refseq_name": "DNA helicase ROCK-N-ROLLERS", "refseq_ac": [ { "id": "NP_001326060", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001326060", "type": "external" } ], "gene_names_uniprotkb": "MER3; RCK; MER3; MGF10.14; RCK; ROCK-N-ROLLERS", "gene_names_refseq": "MER3; RCK; ROCK-N-ROLLERS", "protein_names_uniprotkb": "ATP-dependent DNA helicase homolog MER3; 5.6.2.4; DExH-box ATP-dependent RNA helicase DExH17; DNA 3'-5' helicase MER3; Protein ROCK-N-ROLLERS", "protein_names_refseq": "DNA helicase ROCK-N-ROLLERS", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G27730)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "10819329;11130713;15854901;16045469;24265739;27862469", "class_list": "", "function": "DNA helicase required for crossover formation, complete synapsis of homologous chromosomes and bivalent formation during meiosis. Is specific to recombination events resulting in interference-sensitive crossovers (class I meiotic crossover)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 3, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0A1I9LN52;Q9LVW8", "ec_number_list": [ { "id": "3.1.-.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.-.-", "type": "external" }, { "id": "5.6.2.3", "url": "https://www.rhea-db.org/rhea/?query=ec:5.6.2.3", "type": "external" }, { "id": "3.6.4.12", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.4.12", "type": "external" }, { "id": "3.6.-.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.-.-", "type": "external" }, { "id": "2.7.7.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.7.-", "type": "external" }, { "id": "3.6.4.13", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.4.13", "type": "external" }, { "id": "5.6.2.4", "url": "https://www.rhea-db.org/rhea/?query=ec:5.6.2.4", "type": "external" }, { "id": "5.6.2.-", "url": "https://www.rhea-db.org/rhea/?query=ec:5.6.2.-", "type": "external" }, { "id": "3.6.1.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.1.-", "type": "external" }, { "id": "3.6.4.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.4.-", "type": "external" }, { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.7.4.3", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.4.3", "type": "external" }, { "id": "5.6.2.5", "url": "https://www.rhea-db.org/rhea/?query=ec:5.6.2.5", "type": "external" }, { "id": "7.2.2.-", "url": "https://www.rhea-db.org/rhea/?query=ec:7.2.2.-", "type": "external" }, { "id": "3.6.4.6", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.4.6", "type": "external" }, { "id": "3.6.1.25", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.1.25", "type": "external" } ], "go_molecular_function": "GO:0043138 3'-5' DNA helicase activity;GO:0003677 DNA binding;GO:0005524 ATP binding;GO:0016887 ATP hydrolysis activity;GO:0019843 rRNA binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0000712 resolution of meiotic recombination intermediates;GO:0007131 reciprocal meiotic recombination;GO:0051026 chiasma assembly", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q5D892-1", "record_type": "protein", "filter_code": "0000000.0000101.010000.100000000000000000.0000000001001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9LUI0-1", "uniprot_id": [ { "id": "Q9LUI0_ARATH", "url": "https://www.uniprot.org/uniprot/Q9LUI0", "type": "external" } ], "mass": 51267.0, "length": 472, "protein_name": "Auxin canalization protein (DUF828)", "gene_name": "FL2", "organism": "Arabidopsis", "refseq_name": "auxin canalization protein (DUF828)", "refseq_ac": [ { "id": "NP_188920", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_188920", "type": "external" } ], "gene_names_uniprotkb": "FL2", "gene_names_refseq": "", "protein_names_uniprotkb": "Auxin canalization protein (DUF828)", "protein_names_refseq": "auxin canalization protein (DUF828)", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G22810)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "11130713;18463617;20466843;25561503;27862469", "class_list": "", "function": "", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005634 nucleus;GO:0009507 chloroplast", "go_biological_process": "GO:0010087 phloem or xylem histogenesis;GO:0009734 auxin-activated signaling pathway;GO:0010305 leaf vascular tissue pattern formation", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q9LUI0-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q56YJ8-1", "uniprot_id": [ { "id": "FAMA_ARATH", "url": "https://www.uniprot.org/uniprot/Q56YJ8", "type": "external" } ], "mass": 46408.0, "length": 414, "protein_name": "Transcription factor FAMA", "gene_name": "FAMA; FMA", "organism": "Arabidopsis", "refseq_name": "basic helix-loop-helix (bHLH) DNA-binding superfamily protein", "refseq_ac": [ { "id": "NP_189056", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_189056", "type": "external" } ], "gene_names_uniprotkb": "FAMA; FMA; BHLH97; EN14; FAMA; FMA; MUJ8.4", "gene_names_refseq": "FAMA; FMA", "protein_names_uniprotkb": "Transcription factor FAMA; AtbHLH97; Basic helix-loop-helix protein 97; Transcription factor EN 14; bHLH 97; bHLH transcription factor bHLH097", "protein_names_refseq": "basic helix-loop-helix (bHLH) DNA-binding superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G24140)", "pathway_count": 1, "publication_count": 15, "publication_id_list": "10819329;11130713;12679534;12897250;14600211;17088607;17183265;17183267;17691100;17928257;22442411;24571519;24654956;25303364;27862469", "class_list": "", "function": "Transcription activator (PubMed:17088607, PubMed:17183265, PubMed:17183267). Together with MYB88 and MYB124, ensures that stomata contain just two guard cells (GCs) by enforcing a single symmetric precursor cell division before stomatal maturity (PubMed:24571519). Together with SPCH and MUTE, regulates the stomata formation. Required to promote differentiation and morphogenesis of stomatal guard cells and to halt proliferative divisions in their immediate precursors. Mediates the formation of stomata (PubMed:17088607, PubMed:17183265, PubMed:17183267). Prevents histone H3K27me3 marks and derepresses stem cell gene expression (PubMed:24654956)., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9LRN3", "ec_number_list": [], "go_molecular_function": "GO:0003677 DNA binding;GO:0003700 DNA-binding transcription factor activity;GO:0046983 protein dimerization activity", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0045597 positive regulation of cell differentiation;GO:0045893 positive regulation of DNA-templated transcription;GO:0051782 negative regulation of cell division;GO:0090547 response to low humidity", "synthesized_glycan_count": 0, "hit_score": 1.6, "record_id": "Q56YJ8-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q94BN0-1", "uniprot_id": [ { "id": "BT2_ARATH", "url": "https://www.uniprot.org/uniprot/Q94BN0", "type": "external" } ], "mass": 41561.0, "length": 364, "protein_name": "BTB/POZ and TAZ domain-containing protein 2", "gene_name": "BT2", "organism": "Arabidopsis", "refseq_name": "BTB and TAZ domain protein 2", "refseq_ac": [ { "id": "NP_566902", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_566902", "type": "external" } ], "gene_names_uniprotkb": "BT2; ATBT2; BTB and TAZ domain protein 2; T29H11.120", "gene_names_refseq": "ATBT2; BT2; BTB and TAZ domain protein 2", "protein_names_uniprotkb": "BTB/POZ and TAZ domain-containing protein 2; BTB and TAZ domain protein 2", "protein_names_refseq": "BTB and TAZ domain protein 2", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G48360)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "11130713;14593172;15316289;15749712;15772280;17220202;19054356;19525324;27862469", "class_list": "", "function": "May act as a substrate-specific adapter of an E3 ubiquitin-protein ligase complex (CUL3-RBX1-BTB) which mediates the ubiquitination and subsequent proteasomal degradation of target proteins. Plays a key role as a component of the TAC1-mediated telomerase activation pathway certainly by targeting a telomerase repressor to degradation. Seems to occupy an integral position in a complex signaling network that perceives, integrates, and responds to multiple, and sometimes competing, signals. Enhances responses to auxin in postgermination and vegetative development. Also negatively regulates ABA- and sugar-mediated inhibition of the germination. Essential for female and male gametophyte development., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9STL6", "ec_number_list": [], "go_molecular_function": "GO:0005516 calmodulin binding;GO:0008270 zinc ion binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm", "go_biological_process": "GO:0032204 regulation of telomere maintenance;GO:0009409 response to cold;GO:0006355 regulation of DNA-templated transcription;GO:0042542 response to hydrogen peroxide;GO:0009611 response to wounding", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "Q94BN0-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9M7Q2-1", "uniprot_id": [ { "id": "AI5L7_ARATH", "url": "https://www.uniprot.org/uniprot/Q9M7Q2", "type": "external" } ], "mass": 46492.0, "length": 431, "protein_name": "ABSCISIC ACID-INSENSITIVE 5-like protein 7", "gene_name": "ABF4", "organism": "Arabidopsis", "refseq_name": "ABRE binding factor 4", "refseq_ac": [ { "id": "NP_001326147", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001326147", "type": "external" } ], "gene_names_uniprotkb": "ABF4; ABRE binding factor 4; AREB2; AtAREB2; BZIP38; MVI11.7", "gene_names_refseq": "ABA-RESPONSIVE ELEMENT BINDING PROTEIN 2; ABF4; ABRE binding factor 4; AREB2; AtAREB2; MVI11.7", "protein_names_uniprotkb": "ABSCISIC ACID-INSENSITIVE 5-like protein 7; ABA-responsive element-binding protein 2; ABRE-binding factor 4; Abscisic acid responsive elements-binding factor 4; AtbZIP38; bZIP transcription factor 38", "protein_names_refseq": "ABRE binding factor 4", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G19290)", "pathway_count": 1, "publication_count": 19, "publication_id_list": "10636868;10819329;11005831;11130713;11884679;11906833;14593172;15361142;16284313;16299177;16446457;16463099;17921317;18484180;20466843;22074104;27862469;30962512;32540007", "class_list": "", "function": "Functions as a transcriptional activator in the ABA-inducible expression of LTI65/RD29B (AC Q04980). Binds specifically to the ABA-responsive element (ABRE) of the LTI65/RD29B (AC Q04980) gene promoter (PubMed:11005831, PubMed:11884679, PubMed:15361142, PubMed:16463099). Binds to the promoter of FREE1 and activates its transcription (PubMed:32540007)., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 7, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9LT88", "ec_number_list": [], "go_molecular_function": "GO:0003700 DNA-binding transcription factor activity;GO:0000976 transcription cis-regulatory region binding;GO:0003677 DNA binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006355 regulation of DNA-templated transcription;GO:0045893 positive regulation of DNA-templated transcription;GO:0009651 response to salt stress;GO:0009414 response to water deprivation", "synthesized_glycan_count": 0, "hit_score": 2.0, "record_id": "Q9M7Q2-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q42539-1", "uniprot_id": [ { "id": "PIMT1_ARATH", "url": "https://www.uniprot.org/uniprot/Q42539", "type": "external" } ], "mass": 24614.0, "length": 230, "protein_name": "Protein-L-isoaspartate O-methyltransferase 1", "gene_name": "PIMT1", "organism": "Arabidopsis", "refseq_name": "protein-l-isoaspartate methyltransferase 1", "refseq_ac": [ { "id": "NP_680112", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_680112", "type": "external" } ], "gene_names_uniprotkb": "PIMT1; ATPIMT1; PCM; T29H11.150", "gene_names_refseq": "ATPIMT1; Arabidopsis thaliana protein-l-isoaspartate methyltransferase 1; PIMT1; protein-l-isoaspartate methyltransferase 1", "protein_names_uniprotkb": "Protein-L-isoaspartate O-methyltransferase 1; 2.1.1.77; AtPIMT1; L-isoaspartyl protein carboxyl methyltransferase; Protein L-isoaspartyl methyltransferase; Protein-beta-aspartate methyltransferase", "protein_names_refseq": "protein-l-isoaspartate methyltransferase 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G48330)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "11130713;15347786;19011119;21076691;23572148;27862469;29167316;30833711;8624405", "class_list": "", "function": "Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins. Contributes to seed longevity and germination vigor by limiting the abnormal accumulation of the L-isoaspartyl residues in seed proteins., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 3, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0JQ02;Q9STL3", "ec_number_list": [ { "id": "2.1.1.77", "url": "https://www.rhea-db.org/rhea/?query=ec:2.1.1.77", "type": "external" } ], "go_molecular_function": "GO:0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0009507 chloroplast", "go_biological_process": "GO:0009651 response to salt stress;GO:0032259 methylation;GO:0030091 protein repair;GO:0009737 response to abscisic acid;GO:0009845 seed germination", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "Q42539-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9STM3-1", "uniprot_id": [ { "id": "REF6_ARATH", "url": "https://www.uniprot.org/uniprot/Q9STM3", "type": "external" } ], "mass": 152629.0, "length": 1360, "protein_name": "Lysine-specific demethylase REF6", "gene_name": "REF6", "organism": "Arabidopsis", "refseq_name": "relative of early flowering 6", "refseq_ac": [ { "id": "NP_680116", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_680116", "type": "external" } ], "gene_names_uniprotkb": "REF6; EIN6; JMJ12; PKDM9A; T29H11_50; relative of early flowering 6", "gene_names_refseq": "JMJ12; Jumonji domain-containing protein 12; REF6; relative of early flowering 6", "protein_names_uniprotkb": "Lysine-specific demethylase REF6; 1.14.11.-; AtJMJ12; Jumonji domain-containing protein 12; Lysine-specific histone demethylase REF6; Protein ENHANCER OF ETHYLENE INSENSITIVITY 6; Protein ETHYLENE-INSENSITIVE 6; Protein JUMONJI 12; Protein RELATIVE OF EARLY FLOWERING 6; [histone H3]-trimethyl-L-lysine(27) monodemethylase JMJ12; [histone H3]-trimethyl-L-lysine(36) monodemethylase JMJ12; [histone H3]-trimethyl-L-lysine(4) monodemethylase JMJ12", "protein_names_refseq": "relative of early flowering 6", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G48430)", "pathway_count": 1, "publication_count": 34, "publication_id_list": "11130713;15377760;18463617;18467490;18713399;18950507;19376835;20466843;20711170;21642989;21768351;22060019;22223895;23328941;23572148;23660473;23776212;25105952;25561503;26091701;26187819;27111034;27111035;27862469;29654922;30267471;30778176;30833711;31048693;31418686;32257379;32392578;33037128;33107825", "class_list": "", "function": "Histone demethylase that demethylates 'Lys-27' (H3K27me) of histone H3, thus acting as a positive regulator of gene expression (PubMed:33107825). Demethylates both tri- (H3K27me3) and di-methylated (H3K27me2) H3K27me (PubMed:21642989, PubMed:27111035, PubMed:33107825). Also demethylates H3K4me3/2 and H3K36me3/2 in an in vitro assay (PubMed:20711170). Involved in the transcriptional regulation of hundreds of genes regulating developmental patterning and responses to various stimuli (PubMed:18467490). Binds DNA via its four zinc fingers in a sequence-specific manner, 5'-CTCTG(C/T)T(C/T)-3' (5'-CTCTGYTY-3'), with a preference for hypo-methylated status (e.g. cytosine methylation), to promote the demethylation of H3K27me3 and recruit the chromatin remodeler BRM in order to activate gene expression (PubMed:27111034, PubMed:27111035, PubMed:31048693, PubMed:32257379). Participates in the regulation of organ boundary formation (PubMed:27111034, PubMed:27111035, PubMed:31048693, PubMed:32257379). Bind mostly motifs located in active chromatin states which are depleted for heterochromatic modifications (PubMed:31048693). Involved in the regulation of flowering time by repressing FLOWERING LOCUS C (FLC) expression (PubMed:15377760, PubMed:32392578, PubMed:33107825). Stimulates lateral roots formation (e.g. primordium initiation and emergence) via the epigenetic de-repression of PIN genes such as PIN1, PIN3 and PIN7 directly by modulating the methylation status of their loci (PubMed:30267471). Interacts with the NF-Y complex to regulate SOC1 (PubMed:25105952). Mediates the recruitment of BRM to its target loci (PubMed:27111034). Together with EEN, involved in the epigenetic chromatin-dependent regulatory mechanism that monitors the expression of the essential multifunctional plant stress regulator EIN2 via H3K27me3 repressive histone demethylation and histone variant H2A.Z eviction, thus modulating responses to ethylene (ET), especially during embryogenesis (PubMed:31418686). Eluviates seed dormancy by triggering abscisic acid (ABA) catabolism in seeds via the induction of CYP707A1 and CYP707A3 expression, genes involved in ABA degradation; binds directly to CYP707A1 and CYP707A3 loci to reduce their H3K27me3 levels in developing siliques (PubMed:33037128). Required for systemic acquired resistance (SAR) toward pathogenic bacteria (e.g. Pseudomonas syringae pv tomato DC3000 (avrPto)) (PubMed:32392578). Together with FLD and MSI4/FVE, contributes to dehydroabietinal-dependent (DA, a diterpenoid tricyclic diterpene) activation of flowering and SAR (PubMed:32392578). Binds to the HSFA2 chromatin region to alleviate H3K27me3 repressive marks and trigger its expression in response to heat in a BRM-dependent manner (PubMed:30778176). Involved in the mechanisms necessary for quick response to heat and subsequent heritable transgenerational memory of heat acclimation (global warming) such as early flowering and attenuated immunity; this process includes epigenetic regulation as well as post-transcriptional gene silencing (PTGS) (PubMed:30778176). In response to heat, HSFA2 is activated and promotes the expression of REF6 which in turn derepresses HSFA2, thus establishing a heritable feedback loop able to trigger SGIP1 and subsequent SGIP1-mediated SGS3 degradation; this prevents the biosynthesis of trans-acting siRNA (tasiRNA) and leads to the release of HTT5, which drives early flowering but attenuates immunity (PubMed:30778176)., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed]; Involved in the maintenance of H3K27me1 histone marks on euchromatin in a PRC2-dependent manner, to maintain low-level basal expression of corresponding genes (PubMed:33107825). Together with ELF6, required for H3K27me3 resetting (especially in constitutive heterochromatin within the pericentromeric regions) and transgenerational inheritance of histone marks, thus acting in safeguarding genome and epigenome integrity during sexual reproduction (PubMed:33107825)., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 25, "reported_mutagensis": 10, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [ { "id": "1.14.11.-", "url": "https://www.rhea-db.org/rhea/?query=ec:1.14.11.-", "type": "external" }, { "id": "1.14.11.68", "url": "https://www.rhea-db.org/rhea/?query=ec:1.14.11.68", "type": "external" } ], "go_molecular_function": "GO:0034647 histone H3K4me/H3K4me2/H3K4me3 demethylase activity;GO:0008270 zinc ion binding;GO:0042803 protein homodimerization activity;GO:0043565 sequence-specific DNA binding;GO:0071558 histone H3K27me2/H3K27me3 demethylase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0031011 Ino80 complex;GO:0000785 chromatin", "go_biological_process": "GO:0006338 chromatin remodeling;GO:0006351 DNA-templated transcription;GO:0010628 positive regulation of gene expression;GO:0051260 protein homooligomerization;GO:0006355 regulation of DNA-templated transcription", "synthesized_glycan_count": 0, "hit_score": 3.5, "record_id": "Q9STM3-1", "record_type": "protein", "filter_code": "0000000.0100101.010000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9LJ44-1", "uniprot_id": [ { "id": "COL12_ARATH", "url": "https://www.uniprot.org/uniprot/Q9LJ44", "type": "external" } ], "mass": 40470.0, "length": 364, "protein_name": "Zinc finger protein CONSTANS-LIKE 12", "gene_name": "BBX10; COL12", "organism": "Arabidopsis", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "BBX10; COL12; B-box domain protein 10; MEK6.3; MEK6_2", "gene_names_refseq": "", "protein_names_uniprotkb": "Zinc finger protein CONSTANS-LIKE 12", "protein_names_refseq": "", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G21880)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "10907853;11130713;12692345;27862469", "class_list": "", "function": "", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "C0SVC3", "ec_number_list": [], "go_molecular_function": "GO:0003700 DNA-binding transcription factor activity;GO:0008270 zinc ion binding;GO:0000976 transcription cis-regulatory region binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0010629 negative regulation of gene expression;GO:0006355 regulation of DNA-templated transcription;GO:0048579 negative regulation of long-day photoperiodism, flowering;GO:2000032 regulation of secondary shoot formation", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "Q9LJ44-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q6NLQ6-1", "uniprot_id": [ { "id": "CDPKW_ARATH", "url": "https://www.uniprot.org/uniprot/Q6NLQ6", "type": "external" } ], "mass": 60935.0, "length": 538, "protein_name": "Calcium-dependent protein kinase 32", "gene_name": "CPK32", "organism": "Arabidopsis", "refseq_name": "calcium-dependent protein kinase 32", "refseq_ac": [ { "id": "NP_191312", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_191312", "type": "external" } ], "gene_names_uniprotkb": "CPK32; ATCPK32; CDPK32; T8H10.130", "gene_names_refseq": "ATCPK32; CDPK32; CPK32; calcium-dependent protein kinase 32", "protein_names_uniprotkb": "Calcium-dependent protein kinase 32; 2.7.11.1", "protein_names_refseq": "calcium-dependent protein kinase 32", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G57530)", "pathway_count": 1, "publication_count": 16, "publication_id_list": "11130713;12068094;12805596;14506206;15308754;16299177;16533544;18463617;20374526;20466843;20733066;23111157;24121288;25561503;27862469;30833711", "class_list": "", "function": "May play a role in signal transduction pathways that involve calcium as a second messenger. Involved in maintaining Ca2+ homeostasis in pollen tube tips by regulating CNGC18 (PubMed:24121288). Functions as regulator of the calcium-mediated abscisic acid (ABA) signaling pathway (PubMed:16299177). Phosphorylates ABA-responsive transcription factor ABF4 in vitro (PubMed:16299177)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 7, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q0WWK2;Q9SCM0", "ec_number_list": [ { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.3.2.27", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.2.27", "type": "external" }, { "id": "2.7.10.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.-", "type": "external" }, { "id": "3.1.4.46", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.4.46", "type": "external" }, { "id": "2.7.11.25", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.25", "type": "external" }, { "id": "2.7.11.22", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.22", "type": "external" }, { "id": "2.7.10.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.1", "type": "external" }, { "id": "2.7.11.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.-", "type": "external" }, { "id": "2.7.11.24", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.24", "type": "external" }, { "id": "2.7.12.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.1", "type": "external" }, { "id": "2.7.11.23", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.23", "type": "external" }, { "id": "2.7.12.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.2", "type": "external" }, { "id": "2.7.-.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.-.-", "type": "external" }, { "id": "3.1.26.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.26.-", "type": "external" }, { "id": "3.1.3.16", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.16", "type": "external" }, { "id": "2.7.11.34", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.34", "type": "external" }, { "id": "4.6.1.2", "url": "https://www.rhea-db.org/rhea/?query=ec:4.6.1.2", "type": "external" } ], "go_molecular_function": "GO:0009931 calcium-dependent protein serine/threonine kinase activity;GO:0005516 calmodulin binding;GO:0005524 ATP binding;GO:0005509 calcium ion binding;GO:0004683 calcium/calmodulin-dependent protein kinase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005829 cytosol;GO:0005886 plasma membrane;GO:0009506 plasmodesma", "go_biological_process": "GO:0035556 intracellular signal transduction;GO:0009651 response to salt stress;GO:0009738 abscisic acid-activated signaling pathway", "synthesized_glycan_count": 0, "hit_score": 1.7, "record_id": "Q6NLQ6-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9M2K8-1", "uniprot_id": [ { "id": "AGL18_ARATH", "url": "https://www.uniprot.org/uniprot/Q9M2K8", "type": "external" } ], "mass": 28874.0, "length": 256, "protein_name": "Agamous-like MADS-box protein AGL18", "gene_name": "AGL18", "organism": "Arabidopsis", "refseq_name": "AGAMOUS-like 18", "refseq_ac": [ { "id": "NP_191298", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_191298", "type": "external" } ], "gene_names_uniprotkb": "AGL18; AGAMOUS-like 18; F28O9.240", "gene_names_refseq": "AGAMOUS-like 18; AGL18", "protein_names_uniprotkb": "Agamous-like MADS-box protein AGL18", "protein_names_refseq": "AGAMOUS-like 18", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G57390)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "11115127;11130713;12837945;12949148;16028119;17521410;18034896;18799658;27862469", "class_list": "", "function": "Probable transcription factor involved in the negative regulation of flowering, probably through the photoperiodic pathway. Prevents premature flowering. Downstream regulator of a subset of the MIKC* MADS-controlled genes required during pollen maturation., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q1ECG0;Q570M9;Q8LAS6", "ec_number_list": [], "go_molecular_function": "GO:0003700 DNA-binding transcription factor activity;GO:0046983 protein dimerization activity;GO:0000976 transcription cis-regulatory region binding;GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding;GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006357 regulation of transcription by RNA polymerase II;GO:0045944 positive regulation of transcription by RNA polymerase II;GO:0009555 pollen development;GO:0009908 flower development", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "Q9M2K8-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9ZR37-1", "uniprot_id": [ { "id": "DUS1_ARATH", "url": "https://www.uniprot.org/uniprot/Q9ZR37", "type": "external" } ], "mass": 22017.0, "length": 198, "protein_name": "Dual specificity protein phosphatase 1", "gene_name": "DSPTP1", "organism": "Arabidopsis", "refseq_name": "dual specificity protein phosphatase 1", "refseq_ac": [ { "id": "NP_001118683", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001118683", "type": "external" } ], "gene_names_uniprotkb": "DSPTP1; MDB19.10", "gene_names_refseq": "DSPTP1; dual specificity protein phosphatase 1", "protein_names_uniprotkb": "Dual specificity protein phosphatase 1; 3.1.3.16; 3.1.3.48; AtDsPTP1", "protein_names_refseq": "dual specificity protein phosphatase 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G23610)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "10036776;10819329;11130713;14570888;23111157;27862469", "class_list": "", "function": "Has a dual specificity toward Ser/Thr and Tyr-containing proteins. Dephosphorylates MPK4 in vitro., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 4, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "B3H4F5;F4J449;Q9LUG6", "ec_number_list": [ { "id": "3.1.3.16", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.16", "type": "external" }, { "id": "3.1.3.48", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.48", "type": "external" }, { "id": "3.1.3.27", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.27", "type": "external" }, { "id": "1.20.4.1", "url": "https://www.rhea-db.org/rhea/?query=ec:1.20.4.1", "type": "external" }, { "id": "3.1.3.67", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.67", "type": "external" }, { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.7.13.3", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.13.3", "type": "external" } ], "go_molecular_function": "GO:0005516 calmodulin binding;GO:0004722 protein serine/threonine phosphatase activity;GO:0008138 protein tyrosine/serine/threonine phosphatase activity;GO:0017017 MAP kinase tyrosine/serine/threonine phosphatase activity;GO:0008330 protein tyrosine/threonine phosphatase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0009507 chloroplast", "go_biological_process": "GO:0006470 protein dephosphorylation", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q9ZR37-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9FEB5-1", "uniprot_id": [ { "id": "DSPG4_ARATH", "url": "https://www.uniprot.org/uniprot/Q9FEB5", "type": "external" } ], "mass": 42626.0, "length": 379, "protein_name": "Phosphoglucan phosphatase DSP4, chloroplastic", "gene_name": "DSP4; SEX4", "organism": "Arabidopsis", "refseq_name": "dual specificity protein phosphatase (DsPTP1) family protein", "refseq_ac": [ { "id": "NP_566960", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_566960", "type": "external" } ], "gene_names_uniprotkb": "DSP4; SEX4; ATPTPKIS1; ATSEX4; DSP4; F4F15.290; PTPKIS1; SEX4; STARCH-EXCESS 4; T25B15.2", "gene_names_refseq": "ATPTPKIS1; ATSEX4; DSP4; DUAL-SPECIFICITY PROTEIN PHOSPHATASE 4; SEX4; STARCH-EXCESS 4; T25B15.2", "protein_names_uniprotkb": "Phosphoglucan phosphatase DSP4, chloroplastic; 3.1.3.-; AtPTPKIS1; AtSEX4; Dual specificity protein phosphatase 4; Protein STARCH-EXCESS 4", "protein_names_refseq": "dual specificity protein phosphatase (DsPTP1) family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G52180)", "pathway_count": 1, "publication_count": 16, "publication_id_list": "11130713;12148529;14593172;16513634;16623901;16772378;19141707;19754155;19776162;20018599;20679247;22100529;22321580;24799671;26231210;27862469", "class_list": "", "function": "Starch granule-associated phosphoglucan phosphatase involved in the control of starch accumulation. Acts as a major regulator of the initial steps of starch degradation at the granule surface. Functions during the day by dephosphorylating the night-accumulated phospho-oligosaccharides. Can release phosphate from both the C6 and the C3 positions, but dephosphorylates preferentially the C6 position (PubMed:20018599, PubMed:26231210)., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 21, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q8LFS3;Q944A8;Q9FDY9;Q9SUY7", "ec_number_list": [], "go_molecular_function": "GO:0030247 polysaccharide binding;GO:0004721 phosphoprotein phosphatase activity;GO:2001070 starch binding;GO:0019203 carbohydrate phosphatase activity;GO:2001066 amylopectin binding", "go_cellular_component": "GO:0005737 cytoplasm;GO:0009507 chloroplast;GO:0009570 chloroplast stroma", "go_biological_process": "GO:0005983 starch catabolic process;GO:0005982 starch metabolic process;GO:0044042 glucan metabolic process", "synthesized_glycan_count": 0, "hit_score": 1.7, "record_id": "Q9FEB5-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9STS3-1", "uniprot_id": [ { "id": "CDC23_ARATH", "url": "https://www.uniprot.org/uniprot/Q9STS3", "type": "external" } ], "mass": 67135.0, "length": 579, "protein_name": "Anaphase-promoting complex subunit 8", "gene_name": "APC8", "organism": "Arabidopsis", "refseq_name": "anaphase-promoting complex subunit 8", "refseq_ac": [ { "id": "NP_190398", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_190398", "type": "external" } ], "gene_names_uniprotkb": "APC8; CDC23; T24C20.30", "gene_names_refseq": "APC8; CDC23; anaphase-promoting complex subunit 8", "protein_names_uniprotkb": "Anaphase-promoting complex subunit 8; CDC23 homolog; Cell division cycle protein 23 homolog; Cyclosome subunit 8", "protein_names_refseq": "anaphase-promoting complex subunit 8", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G48150)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "11130713;14508008;14593172;25561503;27862469", "class_list": "", "function": "Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin-protein ligase complex that controls progression through mitosis and the G1 phase of the cell cycle. The APC/C complex controls several key steps in the cell cycle by mediating ubiquitination and subsequent degradation of target proteins such as cyclins. The APC/C complex is required for the female gametophyte development and is involved in several aspect of development by controlling cell division and cell elongation. Involved in the control of endoreduplication., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 3, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q570L3;Q93ZW8", "ec_number_list": [], "go_molecular_function": "GO:0140767 enzyme-substrate adaptor activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005680 anaphase-promoting complex", "go_biological_process": "GO:0051301 cell division;GO:0016567 protein ubiquitination;GO:0031145 anaphase-promoting complex-dependent catabolic process;GO:0045842 positive regulation of mitotic metaphase/anaphase transition;GO:0031347 regulation of defense response", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q9STS3-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q43866-1", "uniprot_id": [ { "id": "INV1_ARATH", "url": "https://www.uniprot.org/uniprot/Q43866", "type": "external" } ], "mass": 66280.0, "length": 584, "protein_name": "Beta-fructofuranosidase, insoluble isoenzyme CWINV1", "gene_name": "ATBFRUCT1; CWINV1", "organism": "Arabidopsis", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "ATBFRUCT1; CWINV1; ATCWINV1; BFRUCT1; MMM17.26", "gene_names_refseq": "", "protein_names_uniprotkb": "Beta-fructofuranosidase, insoluble isoenzyme CWINV1; 3.2.1.26; AtbetaFRUCT1; AtcwINV1; Cell wall beta-fructosidase 1; Cell wall invertase 1; Sucrose hydrolase 1", "protein_names_refseq": "", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G13790)", "pathway_count": 1, "publication_count": 13, "publication_id_list": "10907853;11130713;12508063;14593172;16339783;17139091;17873089;17888113;17963237;18258263;27862469;8159800;9951726", "class_list": "glycogene;glycosylhydrolase", "function": "Beta-fructofuranosidase that can use sucrose and 1-kestose, and, to a lower extent, neokestose and levan, as substrates, but not inuline., [UniProtKB, PubMed, UniProtKB]", "predicted_glycosites": 1, "predicted_n_glycosites": 1, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 3, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 3, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 3, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 11, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 4, "binding_glycan_count": 0, "secondary_ac_list": "Q9LIB8", "ec_number_list": [], "go_molecular_function": "GO:0004564 beta-fructofuranosidase activity;GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds", "go_cellular_component": "GO:0005576 extracellular region;GO:0005886 plasma membrane;GO:0010494 cytoplasmic stress granule;GO:0009505 plant-type cell wall;GO:0048046 apoplast", "go_biological_process": "GO:0005975 carbohydrate metabolic process;GO:0009611 response to wounding;GO:0050832 defense response to fungus", "synthesized_glycan_count": 0, "hit_score": 1.7, "record_id": "Q43866-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.1000000010000.101.10100", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8H1P9-1", "uniprot_id": [ { "id": "MB3R3_ARATH", "url": "https://www.uniprot.org/uniprot/Q8H1P9", "type": "external" } ], "mass": 56119.0, "length": 505, "protein_name": "Transcription factor MYB3R-3", "gene_name": "MYB3R-3; MYB3R3", "organism": "Arabidopsis", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "MYB3R-3; MYB3R3; AtMYB3R3; F3L24.24; myb domain protein 3R3; myb domain protein 3r-3", "gene_names_refseq": "", "protein_names_uniprotkb": "Transcription factor MYB3R-3; Myb-related protein 3R-3", "protein_names_refseq": "", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G09370)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "11130713;11597504;14593172;16463103;17287251;21768351;26069325;27862469;28011693", "class_list": "", "function": "Transcription factor that binds 5'-AACGG-3' motifs in gene promoters (By similarity). Transcription repressor that regulates organ growth. Binds to the promoters of G2/M-specific genes and to E2F target genes to prevent their expression in post-mitotic cells and to restrict the time window of their expression in proliferating cells (PubMed:26069325)., [UniProtKB, UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "F4IZX3;Q94CC4;Q9M652;Q9SR26", "ec_number_list": [], "go_molecular_function": "GO:0003700 DNA-binding transcription factor activity;GO:0000976 transcription cis-regulatory region binding;GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding;GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific;GO:0043565 sequence-specific DNA binding", "go_cellular_component": "GO:0070176 DRM complex;GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0008285 negative regulation of cell population proliferation;GO:0006355 regulation of DNA-templated transcription;GO:0045892 negative regulation of DNA-templated transcription;GO:0006974 DNA damage response", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "Q8H1P9-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q67XJ2-1", "uniprot_id": [ { "id": "NFYBA_ARATH", "url": "https://www.uniprot.org/uniprot/Q67XJ2", "type": "external" } ], "mass": 19155.0, "length": 176, "protein_name": "Nuclear transcription factor Y subunit B-10", "gene_name": "NF-YB10; NFYB10", "organism": "Arabidopsis", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "NF-YB10; NFYB10; F4P12_40; nuclear factor Y; subunit B10", "gene_names_refseq": "", "protein_names_uniprotkb": "Nuclear transcription factor Y subunit B-10; AtNF-YB-10", "protein_names_refseq": "", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G53340)", "pathway_count": 1, "publication_count": 3, "publication_id_list": "11130713;11867211;27862469", "class_list": "", "function": "Component of the NF-Y/HAP transcription factor complex. The NF-Y complex stimulates the transcription of various genes by recognizing and binding to a CCAAT motif in promoters., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9LFI3", "ec_number_list": [], "go_molecular_function": "GO:0003700 DNA-binding transcription factor activity;GO:0046982 protein heterodimerization activity;GO:0000976 transcription cis-regulatory region binding;GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific;GO:0001228 DNA-binding transcription activator activity, RNA polymerase II-specific", "go_cellular_component": "GO:0005634 nucleus;GO:0016602 CCAAT-binding factor complex", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006357 regulation of transcription by RNA polymerase II;GO:0019760 glucosinolate metabolic process", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "Q67XJ2-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q6PUA2-1", "uniprot_id": [ { "id": "TAF1B_ARATH", "url": "https://www.uniprot.org/uniprot/Q6PUA2", "type": "external" } ], "mass": 202252.0, "length": 1786, "protein_name": "Transcription initiation factor TFIID subunit 1b", "gene_name": "HAF2; TAF1B", "organism": "Arabidopsis", "refseq_name": "histone acetyltransferase of the TAFII250 family 2", "refseq_ac": [ { "id": "NP_188534", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_188534", "type": "external" } ], "gene_names_uniprotkb": "HAF2; TAF1B; HAF2; K13E13.15; K13E13_16; TAF1B; TAF1; TBP-ASSOCIATED FACTOR 1B; TBP-ASSOCIATED FACTOR 1", "gene_names_refseq": "HAF2; TAF1B; TAF1; TBP-ASSOCIATED FACTOR 1B; TBP-ASSOCIATED FACTOR 1; histone acetyltransferase of the TAFII250 family 2", "protein_names_uniprotkb": "Transcription initiation factor TFIID subunit 1b; AtTAF1b; TAFII250-B; TBP-associated factor 1b; Transcription initiation factor TFIID subunit 1-B", "protein_names_refseq": "histone acetyltransferase of the TAFII250 family 2", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G19040)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "10907853;11130713;12466527;15525647;15527982;17085686;26091701;27862469", "class_list": "", "function": "TAFs are components of the transcription factor IID (TFIID) complex that is essential for mediating regulation of RNA polymerase transcription. Core scaffold of the TFIID complex. Acts as a histone acetyltransferase involved in the light regulation of growth and gene expression. Required for H3K9, H3K27, and H4K12 acetylation on the target promoters., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "Q9LJ62", "ec_number_list": [], "go_molecular_function": "GO:0017025 TBP-class protein binding;GO:0004402 histone acetyltransferase activity;GO:0016251 RNA polymerase II general transcription initiation factor activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005669 transcription factor TFIID complex", "go_biological_process": "GO:0009416 response to light stimulus;GO:0051123 RNA polymerase II preinitiation complex assembly", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "Q6PUA2-1", "record_type": "protein", "filter_code": "0000000.0000101.010000.100000000000000000.0000000001001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q93Z81-1", "uniprot_id": [ { "id": "CAX3_ARATH", "url": "https://www.uniprot.org/uniprot/Q93Z81", "type": "external" } ], "mass": 49851.0, "length": 459, "protein_name": "Vacuolar cation/proton exchanger 3", "gene_name": "CAX3", "organism": "Arabidopsis", "refseq_name": "cation exchanger 3", "refseq_ac": [ { "id": "NP_190754", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_190754", "type": "external" } ], "gene_names_uniprotkb": "CAX3; ATCAX3; ATEM1.11; ATHCX1; CAX1-LIKE; cation exchanger 3", "gene_names_refseq": "ATCAX3; ATHCX1; CALCIUM/PROTON EXCHANGER CAX1-LIKE PROTEIN; CAX1-LIKE; CAX3; cation exchanger 3", "protein_names_uniprotkb": "Vacuolar cation/proton exchanger 3; Ca(2+)/H(+) antiporter CAX3; Ca(2+)/H(+) exchanger 3; Protein CATION EXCHANGER 3", "protein_names_refseq": "cation exchanger 3", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G51860)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "10645728;11080595;11130713;11500563;11562366;14593172;16055687;25561503;27862469;29654922", "class_list": "", "function": "Vacuolar cation/proton exchanger (CAX). Translocates Ca(2+) and other metal ions into vacuoles using the proton gradient formed by H(+)-ATPase and H(+)-pyrophosphatase (By similarity). Involved in ion homeostasis in association with CAX1., [UniProtKB, PubMed, UniProtKB, UniProtKB]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 4, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "O65022;Q0WUY4;Q9LKW8", "ec_number_list": [], "go_molecular_function": "GO:0015369 calcium:proton antiporter activity", "go_cellular_component": "GO:0005739 mitochondrion;GO:0005774 vacuolar membrane;GO:0005773 vacuole;GO:0009705 plant-type vacuole membrane;GO:0061993 calcium:proton antiporter complex", "go_biological_process": "GO:0051592 response to calcium ion;GO:0006874 intracellular calcium ion homeostasis;GO:0006812 monoatomic cation transport;GO:0070588 calcium ion transmembrane transport;GO:0055062 phosphate ion homeostasis", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "Q93Z81-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000001001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9M1R4-1", "uniprot_id": [ { "id": "IAA30_ARATH", "url": "https://www.uniprot.org/uniprot/Q9M1R4", "type": "external" } ], "mass": 19238.0, "length": 172, "protein_name": "Auxin-responsive protein IAA30", "gene_name": "IAA30", "organism": "Arabidopsis", "refseq_name": "indole-3-acetic acid inducible 30", "refseq_ac": [ { "id": "NP_191769", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_191769", "type": "external" } ], "gene_names_uniprotkb": "IAA30; T17J13.60", "gene_names_refseq": "IAA30; indole-3-acetic acid inducible 30", "protein_names_uniprotkb": "Auxin-responsive protein IAA30; Indoleacetic acid-induced protein 30", "protein_names_refseq": "indole-3-acetic acid inducible 30", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G62100)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "11130713;12036262;14742873;27862469", "class_list": "", "function": "Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations. Repression is thought to result from the interaction with auxin response factors (ARFs), proteins that bind to the auxin-responsive promoter element (AuxRE). Formation of heterodimers with ARF proteins may alter their ability to modulate early auxin response genes expression., [UniProtKB, PubMed, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q2VW99", "ec_number_list": [], "go_molecular_function": "GO:0003700 DNA-binding transcription factor activity;GO:0000976 transcription cis-regulatory region binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0009630 gravitropism;GO:0009733 response to auxin;GO:0009734 auxin-activated signaling pathway;GO:0010262 somatic embryogenesis", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "Q9M1R4-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9SCK1-1", "uniprot_id": [ { "id": "LSU1_ARATH", "url": "https://www.uniprot.org/uniprot/Q9SCK1", "type": "external" } ], "mass": 10781.0, "length": 94, "protein_name": "Protein RESPONSE TO LOW SULFUR 1", "gene_name": "LSU1", "organism": "Arabidopsis", "refseq_name": "response to low sulfur 1", "refseq_ac": [ { "id": "NP_001190042", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001190042", "type": "external" } ], "gene_names_uniprotkb": "LSU1; RESPONSE TO LOW SULFUR 1; T9C5.170", "gene_names_refseq": "LSU1; RESPONSE TO LOW SULFUR 1", "protein_names_uniprotkb": "Protein RESPONSE TO LOW SULFUR 1", "protein_names_refseq": "response to low sulfur 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G49580)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "11130713;11910074;14593172;15842617;25628631;27862469", "class_list": "", "function": "", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "F4IXZ4", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm", "go_biological_process": "GO:0009651 response to salt stress;GO:0098869 cellular oxidant detoxification;GO:0010438 cellular response to sulfur starvation", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q9SCK1-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9FWS9-1", "uniprot_id": [ { "id": "BLH3_ARATH", "url": "https://www.uniprot.org/uniprot/Q9FWS9", "type": "external" } ], "mass": 59679.0, "length": 524, "protein_name": "BEL1-like homeodomain protein 3", "gene_name": "BLH3", "organism": "Arabidopsis", "refseq_name": "BEL1-like homeodomain 3", "refseq_ac": [ { "id": "NP_001077827", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001077827", "type": "external" } ], "gene_names_uniprotkb": "BLH3; BEL1-like homeodomain 3; F1B16.6; F1B16_6", "gene_names_refseq": "BEL1-like homeodomain 3; BLH3; F1B16.6; F1B16_6", "protein_names_uniprotkb": "BEL1-like homeodomain protein 3; BEL1-like protein 3", "protein_names_refseq": "BEL1-like homeodomain 3", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G75410)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "11130712;14593172;15120075;15781858;16513846;25561503;27862469", "class_list": "", "function": "Transcription factor that is responsive of the nuclear import of SHOOT MERISTEMLESS (STM)., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q0WW07;Q8W4I2", "ec_number_list": [], "go_molecular_function": "GO:0003700 DNA-binding transcription factor activity;GO:0000976 transcription cis-regulatory region binding;GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding;GO:0003677 DNA binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006357 regulation of transcription by RNA polymerase II;GO:0048510 regulation of timing of transition from vegetative to reproductive phase;GO:0006355 regulation of DNA-templated transcription", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q9FWS9-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9M4A1-1", "uniprot_id": [ { "id": "SPO12_ARATH", "url": "https://www.uniprot.org/uniprot/Q9M4A1", "type": "external" } ], "mass": 43126.0, "length": 383, "protein_name": "Meiotic recombination protein SPO11-2", "gene_name": "SPO11-2", "organism": "Arabidopsis", "refseq_name": "sporulation 11-2", "refseq_ac": [ { "id": "NP_176582", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_176582", "type": "external" } ], "gene_names_uniprotkb": "SPO11-2; F22C12.24; F22C12_24; sporulation 11-2", "gene_names_refseq": "F22C12.24; F22C12_24; SPO11-2; sporulation 11-2", "protein_names_uniprotkb": "Meiotic recombination protein SPO11-2; 5.6.2.2; AtSPO11-2", "protein_names_refseq": "sporulation 11-2", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G63990)", "pathway_count": 1, "publication_count": 11, "publication_id_list": "10710421;11130712;11410368;17018031;17147637;17762870;17965269;19763177;26917763;27862469;28855712", "class_list": "", "function": "Component of a topoisomerase 6 complex specifically required for meiotic recombination (PubMed:17018031, PubMed:17965269, PubMed:26917763). Together with MTOPVIB, mediates DNA cleavage that forms the double-strand breaks (DSB) that initiate meiotic recombination (PubMed:19763177, PubMed:26917763). The complex promotes relaxation of negative and positive supercoiled DNA and DNA decatenation through cleavage and ligation cycles (PubMed:17018031, PubMed:17965269, PubMed:26917763)., [UniProtKB, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9SH50", "ec_number_list": [], "go_molecular_function": "GO:0003918 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity;GO:0003677 DNA binding;GO:0005524 ATP binding;GO:0046872 metal ion binding", "go_cellular_component": "GO:0005634 nucleus;GO:0000228 nuclear chromosome;GO:0005694 chromosome", "go_biological_process": "GO:0007059 chromosome segregation;GO:0007129 homologous chromosome pairing at meiosis;GO:0042138 meiotic DNA double-strand break formation;GO:0000706 meiotic DNA double-strand break processing;GO:0007131 reciprocal meiotic recombination", "synthesized_glycan_count": 0, "hit_score": 1.2, "record_id": "Q9M4A1-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q42556-1", "uniprot_id": [ { "id": "PMA9_ARATH", "url": "https://www.uniprot.org/uniprot/Q42556", "type": "external" } ], "mass": 105208.0, "length": 954, "protein_name": "ATPase 9, plasma membrane-type", "gene_name": "AHA9; HA9", "organism": "Arabidopsis", "refseq_name": "H[+]-ATPase 9", "refseq_ac": [ { "id": "NP_178181", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_178181", "type": "external" } ], "gene_names_uniprotkb": "AHA9; HA9; AHA9; F23A5.1; F23A5_1; H(+)-ATPase 9; T21F11.1", "gene_names_refseq": "AHA9; F23A5.1; F23A5_1; H(+)-ATPase 9; HA9", "protein_names_uniprotkb": "ATPase 9, plasma membrane-type; 7.1.2.1; Proton pump 9", "protein_names_refseq": "H[+]-ATPase 9", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G80660)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "11130712;15821287;26187819;27862469;8180619", "class_list": "", "function": "The plasma membrane H(+) ATPase of plants and fungi generates a proton gradient that drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 6, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9M8N3;Q9SAJ1", "ec_number_list": [ { "id": "7.1.2.1", "url": "https://www.rhea-db.org/rhea/?query=ec:7.1.2.1", "type": "external" } ], "go_molecular_function": "GO:0008553 P-type proton-exporting transporter activity;GO:0003729 mRNA binding;GO:0005524 ATP binding;GO:0046872 metal ion binding;GO:0016887 ATP hydrolysis activity", "go_cellular_component": "GO:0005739 mitochondrion;GO:0005886 plasma membrane;GO:0000325 plant-type vacuole", "go_biological_process": "GO:0051453 regulation of intracellular pH;GO:1902600 proton transmembrane transport;GO:0120029 proton export across plasma membrane", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q42556-1", "record_type": "protein", "filter_code": "0000000.0000101.010000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9LPW3-1", "uniprot_id": [ { "id": "SCRM2_ARATH", "url": "https://www.uniprot.org/uniprot/Q9LPW3", "type": "external" } ], "mass": 49796.0, "length": 450, "protein_name": "Transcription factor SCREAM2", "gene_name": "SCRM2", "organism": "Arabidopsis", "refseq_name": "basic helix-loop-helix (bHLH) DNA-binding superfamily protein", "refseq_ac": [ { "id": "NP_172746", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_172746", "type": "external" } ], "gene_names_uniprotkb": "SCRM2; BHLH33; EN44; F13K23.12; F13K23_12; ICE2; INDUCER OF CBF EXPRESSION 2; SCREAM 2", "gene_names_refseq": "F13K23.12; F13K23_12; ICE2; INDUCER OF CBF EXPRESSION 2; SCREAM 2; SCRM2", "protein_names_uniprotkb": "Transcription factor SCREAM2; AtbHLH33; Basic helix-loop-helix protein 33; Transcription factor EN 44; bHLH 33; bHLH transcription factor bHLH033", "protein_names_refseq": "basic helix-loop-helix (bHLH) DNA-binding superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G12860)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "11130712;11910074;12679534;12897250;14593172;14600211;18641265;27862469;28507175", "class_list": "", "function": "Mediates stomatal differentiation in the epidermis probably by controlling successive roles of SPCH, MUTE, and FAMA (PubMed:18641265). Functions as a dimer with SPCH during stomatal initiation (PubMed:18641265, PubMed:28507175)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0003700 DNA-binding transcription factor activity;GO:0046983 protein dimerization activity;GO:0000976 transcription cis-regulatory region binding;GO:0043565 sequence-specific DNA binding;GO:0003677 DNA binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006355 regulation of DNA-templated transcription;GO:0010444 guard mother cell differentiation;GO:0050826 response to freezing;GO:0080090 regulation of primary metabolic process", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "Q9LPW3-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q5Q0E6-1", "uniprot_id": [ { "id": "TO6BL_ARATH", "url": "https://www.uniprot.org/uniprot/Q5Q0E6", "type": "external" } ], "mass": 53344.0, "length": 473, "protein_name": "Type 2 DNA topoisomerase 6 subunit B-like", "gene_name": "MTOPVIB", "organism": "Arabidopsis", "refseq_name": "uncharacterized protein", "refseq_ac": [ { "id": "NP_001031210", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001031210", "type": "external" } ], "gene_names_uniprotkb": "MTOPVIB; F8A5.1; F8A5_1", "gene_names_refseq": "F8A5.1; F8A5_1", "protein_names_uniprotkb": "Type 2 DNA topoisomerase 6 subunit B-like; AtMTOPVIB; Meiotic topoisomerase VIB-like", "protein_names_refseq": "uncharacterized protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G60460)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "11130712;16244158;17147637;26917763;26917764;27862469;28855712", "class_list": "", "function": "Component of a topoisomerase 6 complex specifically required for meiotic recombination (PubMed:26917763, PubMed:28855712). Together with SPO11 (SPO11-1 and SPO11-2), mediates DNA cleavage that forms the double-strand breaks (DSB) that initiate meiotic recombination (PubMed:26917763, PubMed:28855712). The complex promotes relaxation of negative and positive supercoiled DNA and DNA decatenation through cleavage and ligation cycles (PubMed:26917763)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O22692;Q5Q0E4;Q5Q0E5", "ec_number_list": [], "go_molecular_function": "GO:0003918 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity;GO:0030674 protein-macromolecule adaptor activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0000793 condensed chromosome;GO:0009507 chloroplast", "go_biological_process": "GO:0042138 meiotic DNA double-strand break formation;GO:0007131 reciprocal meiotic recombination;GO:0065003 protein-containing complex assembly;GO:0048235 pollen sperm cell differentiation;GO:0048314 embryo sac morphogenesis", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q5Q0E6-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q6JDV7-1", "uniprot_id": [ { "id": "POLK_ARATH", "url": "https://www.uniprot.org/uniprot/Q6JDV7", "type": "external" } ], "mass": 75252.0, "length": 671, "protein_name": "DNA polymerase kappa", "gene_name": "POLK", "organism": "Arabidopsis", "refseq_name": "DNA/RNA polymerases superfamily protein", "refseq_ac": [ { "id": "NP_001320644", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001320644", "type": "external" } ], "gene_names_uniprotkb": "POLK; F2J10.13; F2J10_13", "gene_names_refseq": "F2J10.13; F2J10_13", "protein_names_uniprotkb": "DNA polymerase kappa; 2.7.7.7; AtPOLK", "protein_names_refseq": "DNA/RNA polymerases superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G49980)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "11130712;15200644;15645454;17550419;27862469", "class_list": "", "function": "Template-directed low-fidelity DNA polymerase specifically involved in DNA repair (PubMed:15200644, PubMed:17550419). Able to extend primer-terminal mispairs, and to insert nucleotides opposite to a single 7,8-dihydro-8-oxoGuanine (8-oxoG) lesion and moderately extend from the resulting primer end, thus leading to both error-free and error-prone bypass of 8-oxoG DNA lesions (PubMed:17550419). Probably involved in consecutive DNA replication cycles in the absence of mitosis (PubMed:15200644). Binds preferentially template-primer DNA substrates or single-stranded DNA (PubMed:17550419). Plays an important role in translesion synthesis, where the normal high-fidelity DNA polymerases cannot proceed and DNA synthesis stalls. Depending on the context, it inserts the correct base, but causes frequent base transitions, transversions and frameshifts (By similarity)., [UniProtKB, PubMed, UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 3, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A1P8ANH5;Q56YN7;Q9LPM1", "ec_number_list": [ { "id": "2.7.7.7", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.7.7", "type": "external" }, { "id": "2.7.7.102", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.7.102", "type": "external" }, { "id": "2.7.7.49", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.7.49", "type": "external" }, { "id": "3.4.23.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.4.23.-", "type": "external" }, { "id": "4.2.99.-", "url": "https://www.rhea-db.org/rhea/?query=ec:4.2.99.-", "type": "external" } ], "go_molecular_function": "GO:0003887 DNA-directed DNA polymerase activity;GO:0008270 zinc ion binding;GO:0003684 damaged DNA binding;GO:0003697 single-stranded DNA binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0009507 chloroplast", "go_biological_process": "GO:0006281 DNA repair;GO:0042276 error-prone translesion synthesis;GO:0006260 DNA replication", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q6JDV7-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9SK91-1", "uniprot_id": [ { "id": "BH094_ARATH", "url": "https://www.uniprot.org/uniprot/Q9SK91", "type": "external" } ], "mass": 34893.0, "length": 304, "protein_name": "Transcription factor bHLH94", "gene_name": "BHLH094; BHLH94", "organism": "Arabidopsis", "refseq_name": "basic helix-loop-helix (bHLH) DNA-binding superfamily protein", "refseq_ac": [ { "id": "NP_564171", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_564171", "type": "external" } ], "gene_names_uniprotkb": "BHLH094; BHLH94; EN16; F12K8.16; F12K8_16; bHLH094; bHLH94", "gene_names_refseq": "F12K8.16; F12K8_16; bHLH094; bHLH94", "protein_names_uniprotkb": "Transcription factor bHLH94; AtbHLH94; Basic helix-loop-helix protein 94; Transcription factor EN 16; bHLH 94; bHLH transcription factor bHLH094", "protein_names_refseq": "basic helix-loop-helix (bHLH) DNA-binding superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G22490)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "11130712;12679534;12897250;14600211;23572148;27862469", "class_list": "", "function": "", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q8L9T3", "ec_number_list": [], "go_molecular_function": "GO:0003700 DNA-binding transcription factor activity;GO:0046983 protein dimerization activity;GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding;GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific;GO:0003677 DNA binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006357 regulation of transcription by RNA polymerase II;GO:0006355 regulation of DNA-templated transcription;GO:0010052 guard cell differentiation", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q9SK91-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9SEU4-1", "uniprot_id": [ { "id": "SRC33_ARATH", "url": "https://www.uniprot.org/uniprot/Q9SEU4", "type": "external" } ], "mass": 33337.0, "length": 287, "protein_name": "Serine/arginine-rich SC35-like splicing factor SCL33", "gene_name": "SCL33", "organism": "Arabidopsis", "refseq_name": "SC35-like splicing factor 33", "refseq_ac": [ { "id": "NP_001031195", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001031195", "type": "external" } ], "gene_names_uniprotkb": "SCL33; ATSCL33; At-SCL33; F7A10.15; F7A10.26; F7A10.27; F7A10_26; SC35-LIKE SPLICING FACTOR 33; SC35-like splicing factor 33; SR33", "gene_names_refseq": "ATSCL33; At-SCL33; F7A10.26; F7A10.27; F7A10_26; SC35-LIKE SPLICING FACTOR 33; SC35-like splicing factor 33; SCL33; SR33", "protein_names_uniprotkb": "Serine/arginine-rich SC35-like splicing factor SCL33; At-SCL33; AtSCL33; SC35-like splicing factor 33; Serine/arginine-rich splicing factor 33", "protein_names_refseq": "SC35-like splicing factor 33", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G55310)", "pathway_count": 1, "publication_count": 28, "publication_id_list": "10593939;11130712;12176998;14593172;15034145;15133128;15270675;16497658;16520337;16807317;17319848;18402682;18463617;19376835;19423640;20466843;20884799;21935421;22913769;23111157;23572148;23660473;23776212;25561503;26187819;27862469;28011693;30833711", "class_list": "", "function": "Involved in intron recognition and spliceosome assembly. Binds to multiple 5'-GAAG-3' repeats found in its third intron, suggesting autoregulation of alternative splicing (PubMed:22913769). May be necessary for accurate splicing of the 3' region of introns., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 36, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "C0Z312;F4I090;F4I092;Q949P4;Q9C8A1", "ec_number_list": [], "go_molecular_function": "GO:0003723 RNA binding;GO:0003729 mRNA binding;GO:0042802 identical protein binding;GO:0003676 nucleic acid binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005730 nucleolus;GO:0005737 cytoplasm;GO:0005886 plasma membrane;GO:0016607 nuclear speck", "go_biological_process": "GO:0008380 RNA splicing;GO:0000398 mRNA splicing, via spliceosome;GO:0000381 regulation of alternative mRNA splicing, via spliceosome;GO:0006397 mRNA processing", "synthesized_glycan_count": 0, "hit_score": 2.9, "record_id": "Q9SEU4-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9SEZ4-1", "uniprot_id": [ { "id": "MY105_ARATH", "url": "https://www.uniprot.org/uniprot/Q9SEZ4", "type": "external" } ], "mass": 38440.0, "length": 330, "protein_name": "Transcription factor MYB105", "gene_name": "MYB105", "organism": "Arabidopsis", "refseq_name": "myb domain protein 105", "refseq_ac": [ { "id": "NP_177115", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_177115", "type": "external" } ], "gene_names_uniprotkb": "MYB105; ATMYB105; F10D13.19; F10D13_19; F24J1.31; LATERAL ORGAN FUSION 2; LOF2; MYB DOMAIN PROTEIN 105; myb domain protein 105", "gene_names_refseq": "ATMYB105; F10D13.19; F10D13_19; LATERAL ORGAN FUSION 2; LOF2; MYB DOMAIN PROTEIN 105; MYB105; myb domain protein 105", "protein_names_uniprotkb": "Transcription factor MYB105; AtMYB105; MYB-domain transcription factor LOF2; Myb-related protein 105; Protein LATERAL ORGAN FUSION 2", "protein_names_refseq": "myb domain protein 105", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G69560)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "11130712;11597504;19542355;27862469", "class_list": "", "function": "Probable transcription factor that involved in boundary specification, meristem initiation and maintenance, and organ patterning. Functions in both lateral organ separation and axillary meristem formation., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0003700 DNA-binding transcription factor activity;GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding;GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific;GO:0003677 DNA binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006355 regulation of DNA-templated transcription;GO:0010199 organ boundary specification between lateral organs and the meristem", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "Q9SEZ4-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q42593-1", "uniprot_id": [ { "id": "APXT_ARATH", "url": "https://www.uniprot.org/uniprot/Q42593", "type": "external" } ], "mass": 46092.0, "length": 426, "protein_name": "L-ascorbate peroxidase T, chloroplastic", "gene_name": "APXT; TAPX", "organism": "Arabidopsis", "refseq_name": "thylakoidal ascorbate peroxidase", "refseq_ac": [ { "id": "NP_177873", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_177873", "type": "external" } ], "gene_names_uniprotkb": "APXT; TAPX; T5M16.8; T5M16_8", "gene_names_refseq": "T5M16.8; T5M16_8; TAPX; THYLAKOIDAL ASCORBATE PEROXIDASE; thylakoidal ascorbate peroxidase", "protein_names_uniprotkb": "L-ascorbate peroxidase T, chloroplastic; 1.11.1.11; AtAPx06; Thylakoid-bound ascorbate peroxidase; tAPX", "protein_names_refseq": "thylakoidal ascorbate peroxidase", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G77490)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "11130712;16034597;22074104;25561503;27862469;9291097", "class_list": "", "function": "Plays a key role in hydrogen peroxide removal., [UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 3, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9CAQ6", "ec_number_list": [ { "id": "1.11.1.11", "url": "https://www.rhea-db.org/rhea/?query=ec:1.11.1.11", "type": "external" } ], "go_molecular_function": "GO:0046872 metal ion binding;GO:0020037 heme binding;GO:0004601 peroxidase activity;GO:0016688 L-ascorbate peroxidase activity", "go_cellular_component": "GO:0005739 mitochondrion;GO:0009535 chloroplast thylakoid membrane;GO:0009507 chloroplast;GO:0009534 chloroplast thylakoid;GO:0009579 thylakoid", "go_biological_process": "GO:0034599 cellular response to oxidative stress;GO:0009631 cold acclimation;GO:0000302 response to reactive oxygen species;GO:0042744 hydrogen peroxide catabolic process;GO:0071588 hydrogen peroxide mediated signaling pathway", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q42593-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9SEE9-1", "uniprot_id": [ { "id": "SR45_ARATH", "url": "https://www.uniprot.org/uniprot/Q9SEE9", "type": "external" } ], "mass": 45348.0, "length": 414, "protein_name": "Serine/arginine-rich splicing factor SR45", "gene_name": "SR45", "organism": "Arabidopsis", "refseq_name": "arginine/serine-rich 45", "refseq_ac": [ { "id": "NP_001185014", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001185014", "type": "external" } ], "gene_names_uniprotkb": "SR45; AtSR45; F19K19.9; F19K19_9; RNPS1; serine-rich 45", "gene_names_refseq": "ARGININE/SERINE-RICH PROTEIN SR45; AtSR45; F19K19.9; F19K19_9; RNPS1; SR45; arginine/serine-rich 45", "protein_names_uniprotkb": "Serine/arginine-rich splicing factor SR45; At-SR45; AtSR45; Serine/arginine-rich ribonucleoprotein 1", "protein_names_refseq": "arginine/serine-rich 45", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G16610)", "pathway_count": 1, "publication_count": 38, "publication_id_list": "10593939;11130712;14593172;14675452;15270675;16807317;16895966;17319848;17534421;18402682;18414657;18463617;19376835;19403727;19435936;20466843;20699397;20884799;21768351;21935421;22274613;22329444;22563826;22942380;23111157;23328941;23454656;23572148;23660473;23776212;24043427;25561503;26091701;27419465;27436712;27862469;28011693;30833711", "class_list": "", "function": "Involved in 5' and 3' splicing site selection of introns, and may bridge the 5' and 3' components of the spliceosome. Isoform 1 is required during flower petal development and isoform 2 is involved in root growth. Negatively regulates glucose and abscisic acid (ABA) signaling during early seedling development. Involved in the RNA-directed DNA methylation pathway (PubMed:22274613). Modulates KIN10 stability in response to sugars, probably through the splicing regulation of 5PTASE13, a protein implicated in the proteasomal degradation of KIN10 (PubMed:27436712)., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 30, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "F4I4H8;Q5E925;Q94AS1", "ec_number_list": [], "go_molecular_function": "GO:0003723 RNA binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005654 nucleoplasm;GO:0005730 nucleolus;GO:0005737 cytoplasm;GO:0016607 nuclear speck", "go_biological_process": "GO:0008380 RNA splicing;GO:0000398 mRNA splicing, via spliceosome;GO:0000381 regulation of alternative mRNA splicing, via spliceosome;GO:0009737 response to abscisic acid;GO:0010182 sugar mediated signaling pathway", "synthesized_glycan_count": 0, "hit_score": 3.9, "record_id": "Q9SEE9-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q500Y9-1", "uniprot_id": [ { "id": "NADHK_ARATH", "url": "https://www.uniprot.org/uniprot/Q500Y9", "type": "external" } ], "mass": 34831.0, "length": 317, "protein_name": "NADH kinase", "gene_name": "NADK3", "organism": "Arabidopsis", "refseq_name": "NAD(H) kinase 3", "refseq_ac": [ { "id": "NP_177980", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_177980", "type": "external" } ], "gene_names_uniprotkb": "NADK3; ATNADK-3; NAD(H) kinase 3; NADH KINASE; T30F21.8; T30F21_8", "gene_names_refseq": "ARABIDOPSIS THALIANA NADH KINASE 3; ATNADK-3; NAD(H) kinase 3; NADH KINASE; NADK3; T30F21.8; T30F21_8", "protein_names_uniprotkb": "NADH kinase; 2.7.1.86; AtNADK-3", "protein_names_refseq": "NAD(H) kinase 3", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G78590)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "11130712;15347288;15711971;25561503;27862469", "class_list": "", "function": "Phosphorylates specifically NADH. Can phosphorylate NAD with a 100-fold decrease in efficiency compared to NADH. Prefers ATP as nucleoside triphosphate substrate. Can also utilize UTP, GTP and CTP. Key source of the cellular reductant NADPH which is an important antioxidant factor., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9SYM3", "ec_number_list": [ { "id": "2.7.1.86", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.86", "type": "external" }, { "id": "2.7.1.23", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.23", "type": "external" } ], "go_molecular_function": "GO:0003951 NAD+ kinase activity;GO:0005524 ATP binding;GO:0042802 identical protein binding;GO:0042736 NADH kinase activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005829 cytosol", "go_biological_process": "GO:0006741 NADP+ biosynthetic process;GO:0019674 NAD+ metabolic process", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q500Y9-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9FVU9-1", "uniprot_id": [ { "id": "CSN5B_ARATH", "url": "https://www.uniprot.org/uniprot/Q9FVU9", "type": "external" } ], "mass": 40318.0, "length": 358, "protein_name": "COP9 signalosome complex subunit 5b", "gene_name": "CSN5B", "organism": "Arabidopsis", "refseq_name": "COP9-signalosome 5B", "refseq_ac": [ { "id": "NP_177279", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_177279", "type": "external" } ], "gene_names_uniprotkb": "CSN5B; AJH2; COP9-signalosome 5B; CSN5A; CSN5; F3I17.12; F3I17_12", "gene_names_refseq": "AJH2; COP9-signalosome 5B; CSN5B; CSN5; F3I17.12; F3I17_12", "protein_names_uniprotkb": "COP9 signalosome complex subunit 5b; 3.4.-.-; Jun activation domain-binding homolog 2; Signalosome subunit 5b", "protein_names_refseq": "COP9-signalosome 5B", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G71230)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "11130712;11337587;11742986;12615944;14593172;15486099;17307927;23424245;27862469;9811788", "class_list": "", "function": "Probable protease subunit of the COP9 signalosome complex (CSN), a complex involved in various cellular and developmental processes such as photomorphogenesis and auxin and jasmonate responses. The CSN complex is an essential regulator of the ubiquitin (Ubl) conjugation pathway by mediating the deneddylation of the cullin subunits of the SCF-type E3 ligase complexes, leading to decrease the Ubl ligase activity of SCF. In the complex, it probably acts as the catalytic center that mediates the cleavage of Nedd8 from cullins. It however has no metalloprotease activity by itself and requires the other subunits of the CSN complex (By similarity). The CSN complex is involved in repression of photomorphogenesis in darkness by regulating the activity of COP1-containing Ubl ligase complexes. The complex is also required for degradation of PSIAA6 by regulating the activity of the Ubl ligase SCF-TIR complex. Not involved in CSN's deneddylation/derubylation activity (PubMed:15486099, PubMed:17307927). Essential for the structural integrity of the CSN holocomplex (PubMed:17307927)., [UniProtKB, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 6, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O82523", "ec_number_list": [], "go_molecular_function": "GO:0019784 deNEDDylase activity;GO:0008237 metallopeptidase activity;GO:0046872 metal ion binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0008180 COP9 signalosome", "go_biological_process": "GO:0006508 proteolysis;GO:0010971 positive regulation of G2/M transition of mitotic cell cycle;GO:0045732 positive regulation of protein catabolic process;GO:0010387 COP9 signalosome assembly;GO:0000338 protein deneddylation", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "Q9FVU9-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9CAR4-1", "uniprot_id": [ { "id": "WRK36_ARATH", "url": "https://www.uniprot.org/uniprot/Q9CAR4", "type": "external" } ], "mass": 43350.0, "length": 387, "protein_name": "Probable WRKY transcription factor 36", "gene_name": "WRKY36", "organism": "Arabidopsis", "refseq_name": "WRKY DNA-binding protein 36", "refseq_ac": [ { "id": "NP_564976", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_564976", "type": "external" } ], "gene_names_uniprotkb": "WRKY36; ATWRKY36; T17F3.16; T17F3_16; WRKY DNA-binding protein 36", "gene_names_refseq": "ATWRKY36; T17F3.16; T17F3_16; WRKY DNA-binding protein 36; WRKY36", "protein_names_uniprotkb": "Probable WRKY transcription factor 36; WRKY DNA-binding protein 36", "protein_names_refseq": "WRKY DNA-binding protein 36", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G69810)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "11130712;27862469", "class_list": "", "function": "Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity)., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 4, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0003700 DNA-binding transcription factor activity;GO:0043565 sequence-specific DNA binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "Q9CAR4-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9MAX3-1", "uniprot_id": [ { "id": "SUT12_ARATH", "url": "https://www.uniprot.org/uniprot/Q9MAX3", "type": "external" } ], "mass": 71707.0, "length": 653, "protein_name": "Sulfate transporter 1.2", "gene_name": "2; SULTR1", "organism": "Arabidopsis", "refseq_name": "sulfate transporter 1;2", "refseq_ac": [ { "id": "NP_001321366", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001321366", "type": "external" } ], "gene_names_uniprotkb": "2; SULTR1; F28K19.22; F28K19_22; SEL1; SELENATE RESISTANT 1; SULFATE TRANSPORTER; SULTR1:2; sulfate transporter 1:2", "gene_names_refseq": "2; F28K19.22; F28K19_22; SEL1; SELENATE RESISTANT 1; SULFATE TRANSPORTER; SULTR1; sulfate transporter 1", "protein_names_uniprotkb": "Sulfate transporter 1.2", "protein_names_refseq": "2; sulfate transporter 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G78000)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "11130712;11846879;11846880;15718229;18003916;20529854;27862469", "class_list": "", "function": "High-affinity H(+)/sulfate cotransporter that mediates the uptake of the environmental sulfate by plant roots. Plays a central role in the regulation of sulfate assimilation. Unable to transport molybdate., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q0WTN0;Q9SH00", "ec_number_list": [], "go_molecular_function": "GO:0022857 transmembrane transporter activity;GO:0015293 symporter activity;GO:0008271 secondary active sulfate transmembrane transporter activity", "go_cellular_component": "GO:0005886 plasma membrane;GO:0009507 chloroplast;GO:0016020 membrane", "go_biological_process": "GO:0055085 transmembrane transport;GO:0009970 cellular response to sulfate starvation;GO:1902358 sulfate transmembrane transport", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q9MAX3-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9FQ04-1", "uniprot_id": [ { "id": "XRN4_ARATH", "url": "https://www.uniprot.org/uniprot/Q9FQ04", "type": "external" } ], "mass": 107778.0, "length": 947, "protein_name": "5'-3' exoribonuclease 4", "gene_name": "XRN4", "organism": "Arabidopsis", "refseq_name": "exoribonuclease 4", "refseq_ac": [ { "id": "NP_175851", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_175851", "type": "external" } ], "gene_names_uniprotkb": "XRN4; 5'-3' EXORIBONUCLEASE; ACC INSENSITIVE 1; AIN1; ATXRN4; EIN5; ETHYLENE INSENSITIVE 5; EXORIBONUCLEASE 4; F20D21.30; F20D21_30; exoribonuclease 4", "gene_names_refseq": "5'-3' EXORIBONUCLEASE; ACC INSENSITIVE 1; AIN1; ATXRN4; EIN5; ETHYLENE INSENSITIVE 5; EXORIBONUCLEASE 4; F20D21.30; F20D21_30; XRN4; exoribonuclease 4", "protein_names_uniprotkb": "5'-3' exoribonuclease 4; 3.1.13.-; Protein ACC INSENSITIVE 1; Protein ETHYLENE INSENSITIVE 5; Protein EXORIBONUCLEASE 4", "protein_names_refseq": "exoribonuclease 4", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G54490)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "11106401;11130712;14593172;15260969;15528448;16920797;17085683;25561503;27862469;28154133", "class_list": "", "function": "Possesses 5'->3' exoribonuclease activity. Acts as an endogenous post-transcriptional gene silencing (PTGS) suppressor. Degrades miRNA target cleavage products that lack a 5'-cap structure. Antagonizes the negative feedback regulation on EIN3 by promoting EBF1 and EBF2 mRNA decay, which consequently allows the accumulation of EIN3 protein to trigger the ethylene response., [UniProtKB, PubMed, PubMed, PubMed, PubMed, UniProtKB, UniProtKB]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 4, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 4, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 4, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 1, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 0, "biomarker_type": "", "glycan_count": 1, "disease_count": 0, "glyco_site_count": 4, "binding_glycan_count": 0, "secondary_ac_list": "Q9SLI5", "ec_number_list": [], "go_molecular_function": "GO:0003723 RNA binding;GO:0003729 mRNA binding;GO:0008270 zinc ion binding;GO:0004534 5'-3' RNA exonuclease activity;GO:0003676 nucleic acid binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005829 cytosol;GO:0000932 P-body;GO:0010494 cytoplasmic stress granule", "go_biological_process": "GO:0006397 mRNA processing;GO:0051301 cell division;GO:0006402 mRNA catabolic process;GO:0000956 nuclear-transcribed mRNA catabolic process;GO:0040029 epigenetic regulation of gene expression", "synthesized_glycan_count": 0, "hit_score": 1.6, "record_id": "Q9FQ04-1", "record_type": "protein", "filter_code": "0000000.0000101.010000.100000000000000000.0100000001001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9C9A5-1", "uniprot_id": [ { "id": "Q9C9A5_ARATH", "url": "https://www.uniprot.org/uniprot/Q9C9A5", "type": "external" } ], "mass": 22098.0, "length": 195, "protein_name": "MYB-like 2", "gene_name": "MYBL2", "organism": "Arabidopsis", "refseq_name": "MYB-like 2", "refseq_ac": [ { "id": "NP_177259", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_177259", "type": "external" } ], "gene_names_uniprotkb": "MYBL2; ARABIDOPSIS MYB-LIKE 2; ATMYBL2; F23N20.2; F23N20_2; MYB-like 2", "gene_names_refseq": "ARABIDOPSIS MYB-LIKE 2; ATMYBL2; F23N20.2; F23N20_2; MYB-like 2; MYBL2", "protein_names_uniprotkb": "MYB-like 2", "protein_names_refseq": "MYB-like 2", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G71030)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "11130712;27862469", "class_list": "", "function": "", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0003677 DNA binding;GO:0003700 DNA-binding transcription factor activity;GO:0000976 transcription cis-regulatory region binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0030154 cell differentiation;GO:0006355 regulation of DNA-templated transcription;GO:0009718 anthocyanin-containing compound biosynthetic process;GO:0010023 proanthocyanidin biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "Q9C9A5-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q6IDB6-1", "uniprot_id": [ { "id": "TAD2_ARATH", "url": "https://www.uniprot.org/uniprot/Q6IDB6", "type": "external" } ], "mass": 20107.0, "length": 182, "protein_name": "tRNA-specific adenosine deaminase TAD2", "gene_name": "EMB2191; TAD2", "organism": "Arabidopsis", "refseq_name": "Cytidine/deoxycytidylate deaminase family protein", "refseq_ac": [ { "id": "NP_001321516", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001321516", "type": "external" } ], "gene_names_uniprotkb": "EMB2191; TAD2; AtTAD2; EMB2191; F21D18.9; TAD2; emb2191; embryo defective 2191; tRNA adenosine deaminase 2", "gene_names_refseq": "AtTAD2; TAD2; emb2191; embryo defective 2191; tRNA adenosine deaminase 2", "protein_names_uniprotkb": "tRNA-specific adenosine deaminase TAD2; 3.5.4.33; AtTAD2; Protein EMBRYO DEFECTIVE 2191; tRNA-specific adenosine-34 deaminase TAD2", "protein_names_refseq": "Cytidine/deoxycytidylate deaminase family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G48175)", "pathway_count": 1, "publication_count": 3, "publication_id_list": "11130712;25315605;27862469", "class_list": "", "function": "Involved in RNA editing. Catalyzes the specific deamination of adenosine-34 in several cytosolic tRNA species. Generates inosine at the wobble position of the anticodon loop., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9LNH1", "ec_number_list": [ { "id": "3.5.4.33", "url": "https://www.rhea-db.org/rhea/?query=ec:3.5.4.33", "type": "external" } ], "go_molecular_function": "GO:0008251 tRNA-specific adenosine deaminase activity;GO:0008270 zinc ion binding;GO:0052717 tRNA-specific adenosine-34 deaminase activity;GO:0016787 hydrolase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm", "go_biological_process": "GO:0002100 tRNA wobble adenosine to inosine editing;GO:0006400 tRNA modification", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "Q6IDB6-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9C5G0-1", "uniprot_id": [ { "id": "SUF4_ARATH", "url": "https://www.uniprot.org/uniprot/Q9C5G0", "type": "external" } ], "mass": 39801.0, "length": 367, "protein_name": "Protein SUPPRESSOR OF FRI 4", "gene_name": "SUF4", "organism": "Arabidopsis", "refseq_name": "zinc finger (C2H2 type) family protein", "refseq_ac": [ { "id": "NP_001077634", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001077634", "type": "external" } ], "gene_names_uniprotkb": "SUF4; F17F8.14; suppressor of FRIGIDA4", "gene_names_refseq": "F17F8.14; SUF4; suppressor of FRIGIDA4", "protein_names_uniprotkb": "Protein SUPPRESSOR OF FRI 4", "protein_names_refseq": "zinc finger (C2H2 type) family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G30970)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "11130712;14593172;17079264;17138694;19121105;20711170;21282526;24451981;27862469", "class_list": "", "function": "Sequence-specific DNA binding factor that recognizes the 5'-CCAAATTTTAAGTTT-3' sequence. Recruits the FRI-C complex to the FLC promoter. Required for FRI-mediated FLC activation, but has no effect on the expression of MAF1, MAF2, MAF3, MAF5, UFC and CO. Dispensable for the reactivation of FLC in early embryogenesis, but required to maintain high levels of FLC expression in later embryonic and vegetative development., [UniProtKB, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 2, "predicted_n_glycosites": 0, "predicted_o_glycosites": 2, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 2, "binding_glycan_count": 0, "secondary_ac_list": "F4I7U0;Q56YA6;Q8LE54;Q94BZ2;Q9FYI5", "ec_number_list": [], "go_molecular_function": "GO:0003677 DNA binding;GO:0003700 DNA-binding transcription factor activity;GO:0008270 zinc ion binding;GO:0042803 protein homodimerization activity;GO:0046982 protein heterodimerization activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm", "go_biological_process": "GO:0030154 cell differentiation;GO:0006355 regulation of DNA-templated transcription;GO:0009908 flower development;GO:0009910 negative regulation of flower development", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "Q9C5G0-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q5XVG3-1", "uniprot_id": [ { "id": "LAZY4_ARATH", "url": "https://www.uniprot.org/uniprot/Q5XVG3", "type": "external" } ], "mass": 33055.0, "length": 287, "protein_name": "Protein LAZY 4", "gene_name": "DRO1; LAZY4", "organism": "Arabidopsis", "refseq_name": "uncharacterized protein", "refseq_ac": [ { "id": "NP_001322368", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001322368", "type": "external" } ], "gene_names_uniprotkb": "DRO1; LAZY4; DRO1; LZY3; NGR2; T10D10.4; T10D10_4", "gene_names_refseq": "T10D10.4; T10D10_4", "protein_names_uniprotkb": "Protein LAZY 4; AtDRO1; AtLAZY4; AtNGR2; Protein DEEPER ROOTING 1; Protein LAZY1-LIKE 3; Protein NEGATIVE GRAVITROPIC RESPONSE OF ROOTS 2", "protein_names_refseq": "uncharacterized protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G72490)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "11130712;27748769;27862469;28029738;28765510;28821594;31900388;32130643", "class_list": "", "function": "Involved in the regulation of root gravitropism (PubMed:27748769). Functions redundantly with LAZY2 and LAZY3 in the control of root gravitropism (PubMed:27748769). Involved in the development of the root system architecture by influencing lateral root angles and primary root length (PubMed:28029738, PubMed:32130643). Functions redundantly with LAZY1, LAZY2 and LAZY3 to control plant architecture by coupling gravity sensing to the formation of auxin gradients (PubMed:28821594). Involved in the establishement of auxin gradient in primary and lateral roots upon gravitropic stimulation (PubMed:32130643). Involved redundantly with LAZY1 and LAZY2 in the regulation of both shoot and root gravitropism (PubMed:28765510). Mediates gravity signaling in statocytes downstream of amyloplast displacement, leading to the generation of asymmetric auxin distribution in gravity-responding organs (PubMed:28765510). Regulates the direction of polar auxin transport in response to gravity through the control of asymmetric PIN3 expression in the root cap columella (PubMed:28765510). Regulation of auxin flow by the three proteins LAZY1, LAZY2 and LAZY4 in statocytes influences plant architecture by controlling the growth angle of lateral shoots and lateral roots (PubMed:28765510)., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 3, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9C9E7", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005634 nucleus;GO:0005886 plasma membrane;GO:0009501 amyloplast", "go_biological_process": "GO:0040008 regulation of growth;GO:0009630 gravitropism;GO:0080181 lateral root branching", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "Q5XVG3-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9S9K9-1", "uniprot_id": [ { "id": "MYB3_ARATH", "url": "https://www.uniprot.org/uniprot/Q9S9K9", "type": "external" } ], "mass": 29352.0, "length": 257, "protein_name": "Transcription factor MYB3", "gene_name": "MYB3", "organism": "Arabidopsis", "refseq_name": "myb domain protein 3", "refseq_ac": [ { "id": "NP_564176", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_564176", "type": "external" } ], "gene_names_uniprotkb": "MYB3; ATMYB3; F12K8.1; T22J18.19; T22J18_19; TRANSCRIPTION FACTOR MYB3; myb domain protein 3", "gene_names_refseq": "ARABIDOPSIS THALIANA MYB DOMAIN PROTEIN 3; ATMYB3; MYB3; T22J18.19; T22J18_19; TRANSCRIPTION FACTOR MYB3; myb domain protein 3", "protein_names_uniprotkb": "Transcription factor MYB3; AtMYB3; Myb-related protein 3", "protein_names_refseq": "myb domain protein 3", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G22640)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "11130712;11597504;14593172;16463103;18541146;27862469;9839469", "class_list": "", "function": "", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9S7Y2", "ec_number_list": [], "go_molecular_function": "GO:0003700 DNA-binding transcription factor activity;GO:0000976 transcription cis-regulatory region binding;GO:0003677 DNA binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006355 regulation of DNA-templated transcription;GO:0009611 response to wounding;GO:0009892 negative regulation of metabolic process;GO:0009800 cinnamic acid biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q9S9K9-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q6DSU1-1", "uniprot_id": [ { "id": "GLV5_ARATH", "url": "https://www.uniprot.org/uniprot/Q6DSU1", "type": "external" } ], "mass": 12385.0, "length": 109, "protein_name": "Protein GOLVEN 5", "gene_name": "GLV5; RGF2", "organism": "Arabidopsis", "refseq_name": "root meristem growth factor-like protein", "refseq_ac": [ { "id": "NP_172819", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_172819", "type": "external" } ], "gene_names_uniprotkb": "GLV5; RGF2; CLEL1; F21F23.5; GLV5; GOLVEN 5; RGF2; root meristem growth factor 2", "gene_names_refseq": "F21F23.5; GLV5; GOLVEN 5; RGF2; root meristem growth factor 2", "protein_names_uniprotkb": "Protein GOLVEN 5; AtRGF2; CLAVATA3/ESR (CLE)-related protein CLEL1; CLE-Like protein 1; Root meristem growth factor 2", "protein_names_refseq": "root meristem growth factor-like protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G13620)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "11130712;20798316;22307643;23370719;25856240;27001831;27862469", "class_list": "", "function": "Signaling peptide (root growth factor) that maintains the postembryonic root stem cell niche in a PIN2-traffic dependent manner (PubMed:20798316, PubMed:23370719). Root growth factor that regulates the pattern of root growth and lateral root development by modulating the length and the number of cortical cells in the root apical meristem (RAM), and the anticlinal asymmetric cell divisions in lateral root initiation cells (By similarity). Influences the longitudinal growth rate in the primary root in response to phosphate ion (Pi)-deprivation (PubMed:25856240)., [UniProtKB, PubMed, PubMed, PubMed, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q4PT32;Q9LMY6", "ec_number_list": [], "go_molecular_function": "GO:0008083 growth factor activity", "go_cellular_component": "GO:0005576 extracellular region;GO:0005615 extracellular space", "go_biological_process": "GO:0009786 regulation of asymmetric cell division;GO:0008284 positive regulation of cell population proliferation;GO:0010628 positive regulation of gene expression;GO:0030154 cell differentiation;GO:0016036 cellular response to phosphate starvation", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q6DSU1-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q5EAF2-1", "uniprot_id": [ { "id": "IP5PB_ARATH", "url": "https://www.uniprot.org/uniprot/Q5EAF2", "type": "external" } ], "mass": 37580.0, "length": 334, "protein_name": "Type IV inositol polyphosphate 5-phosphatase 11", "gene_name": "5PTASE11; IP5P11", "organism": "Arabidopsis", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "5PTASE11; IP5P11; AT5PTASE11; F16N3.22; F16N3_22", "gene_names_refseq": "", "protein_names_uniprotkb": "Type IV inositol polyphosphate 5-phosphatase 11; 3.1.3.36; 3.1.3.86; At5PTase11", "protein_names_refseq": "", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G47510)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "11130712;11402208;15181205;18392779;21677096;27862469", "class_list": "", "function": "Has phosphatase activity toward PtdIns(4,5)P2, and in vitro toward PtdIns(3,5)P2 and PtdIns(3,4,5)P3. Cannot dephosphorylate PtdIns(5)P, Ins(1,4,5)P3 and Ins(1,3,4,5)P4., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9SX81", "ec_number_list": [ { "id": "3.1.3.86", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.86", "type": "external" }, { "id": "3.1.3.36", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.36", "type": "external" } ], "go_molecular_function": "GO:0043813 phosphatidylinositol-3,5-bisphosphate 5-phosphatase activity;GO:0004439 phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity;GO:0034485 phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity;GO:0016791 phosphatase activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005886 plasma membrane", "go_biological_process": "GO:0009651 response to salt stress;GO:0046856 phosphatidylinositol dephosphorylation;GO:0009733 response to auxin;GO:0009737 response to abscisic acid;GO:0009753 response to jasmonic acid", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q5EAF2-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9FT73-1", "uniprot_id": [ { "id": "RECQ2_ARATH", "url": "https://www.uniprot.org/uniprot/Q9FT73", "type": "external" } ], "mass": 79369.0, "length": 705, "protein_name": "ATP-dependent DNA helicase Q-like 2", "gene_name": "RECQL2", "organism": "Arabidopsis", "refseq_name": "RECQ helicase L2", "refseq_ac": [ { "id": "NP_001077639", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001077639", "type": "external" } ], "gene_names_uniprotkb": "RECQL2; ARABIDOPSIS THALIANA RECQ 2; ATRECQ2; MED34_1; MED34; RECQ helicase L2; RECQ2; RQL2; T19E23.16; T19E23_16", "gene_names_refseq": "ARABIDOPSIS THALIANA RECQ 2; ATRECQ2; MED34; RECQ helicase L2; RECQL2; T19E23.16; T19E23_16", "protein_names_uniprotkb": "ATP-dependent DNA helicase Q-like 2; 5.6.2.4; AtRQ2; AtRecQ2; AtRecQl2; DNA 3'-5' helicase RecQ2; RecQ-like protein 2", "protein_names_refseq": "RECQ helicase L2", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G31360)", "pathway_count": 1, "publication_count": 16, "publication_id_list": "11058127;11130712;12856935;16371241;17560376;18419780;18463617;19755539;20466843;22021418;23771268;24265739;25561503;27862469;30833711;32184352", "class_list": "", "function": "3'-5' DNA helicase that may play a role in the repair of DNA (PubMed:18419780, PubMed:19755539). Its DNA unwinding activity in vitro is dependent on magnesium, and ATP or dATP (PubMed:18419780, PubMed:19755539). Can use GTP/dGTP, CTP/dCTP or UTP/dUTP as nucleotide cofactors (PubMed:18419780, PubMed:19755539). Catalyzes Holliday junction branch migration and replication fork regression (PubMed:19755539, PubMed:23771268). Disrupts D-loop structures (PubMed:18419780). Unwinds G-quadruplex DNA, found in telomeric DNA (PubMed:32184352)., [UniProtKB, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 3, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A8MRK2;Q9SHE4", "ec_number_list": [ { "id": "3.1.-.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.-.-", "type": "external" }, { "id": "5.6.2.3", "url": "https://www.rhea-db.org/rhea/?query=ec:5.6.2.3", "type": "external" }, { "id": "3.6.4.12", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.4.12", "type": "external" }, { "id": "3.6.-.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.-.-", "type": "external" }, { "id": "2.7.7.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.7.-", "type": "external" }, { "id": "3.6.4.13", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.4.13", "type": "external" }, { "id": "5.6.2.4", "url": "https://www.rhea-db.org/rhea/?query=ec:5.6.2.4", "type": "external" }, { "id": "5.6.2.-", "url": "https://www.rhea-db.org/rhea/?query=ec:5.6.2.-", "type": "external" }, { "id": "3.6.1.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.1.-", "type": "external" }, { "id": "3.6.4.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.4.-", "type": "external" }, { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.7.4.3", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.4.3", "type": "external" }, { "id": "5.6.2.5", "url": "https://www.rhea-db.org/rhea/?query=ec:5.6.2.5", "type": "external" }, { "id": "7.2.2.-", "url": "https://www.rhea-db.org/rhea/?query=ec:7.2.2.-", "type": "external" }, { "id": "3.6.4.6", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.4.6", "type": "external" }, { "id": "3.6.1.25", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.1.25", "type": "external" } ], "go_molecular_function": "GO:0043138 3'-5' DNA helicase activity;GO:0003677 DNA binding;GO:0005524 ATP binding;GO:0046872 metal ion binding;GO:0016887 ATP hydrolysis activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005694 chromosome;GO:0016592 mediator complex", "go_biological_process": "GO:0006281 DNA repair;GO:0006310 DNA recombination;GO:0006260 DNA replication;GO:0000724 double-strand break repair via homologous recombination", "synthesized_glycan_count": 0, "hit_score": 1.7, "record_id": "Q9FT73-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9C920-1", "uniprot_id": [ { "id": "KDSB_ARATH", "url": "https://www.uniprot.org/uniprot/Q9C920", "type": "external" } ], "mass": 32245.0, "length": 290, "protein_name": "3-deoxy-manno-octulosonate cytidylyltransferase, mitochondrial", "gene_name": "CKS; KDSB", "organism": "Arabidopsis", "refseq_name": "Nucleotide-diphospho-sugar transferases superfamily protein", "refseq_ac": [ { "id": "NP_175708", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_175708", "type": "external" } ], "gene_names_uniprotkb": "CKS; KDSB; AtCKS; CKS; CMP-KDO synthetase; F14G24.28; KDO1; KDSB", "gene_names_refseq": "AtCKS; CKS; CMP-KDO synthetase; KDSB", "protein_names_uniprotkb": "3-deoxy-manno-octulosonate cytidylyltransferase, mitochondrial; 2.7.7.38; AtCKS; CMP-2-keto-3-deoxyoctulosonic acid synthase; CMP-KDO synthase", "protein_names_refseq": "Nucleotide-diphospho-sugar transferases superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G53000)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "11130712;19423640;19914588;21893514;21896887;23335734;27862469", "class_list": "", "function": "Catalyzes the production of the sugar nucleotide CMP-3-deoxy-D-manno-octulosonate (CMP-KDO). CTP is the preferred nucleotide donor, but it can partially be replaced with UTP. Activates KDO during the biosynthesis of rhamnogalacturonan II (RG-II), a structurally complex pectic polysaccharide of the primary cell wall. RG-II is essential for the cell wall integrity of rapidly growing tissues and pollen tube growth and elongation., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [ { "id": "2.7.7.38", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.7.38", "type": "external" } ], "go_molecular_function": "GO:0008690 3-deoxy-manno-octulosonate cytidylyltransferase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005739 mitochondrion;GO:0005741 mitochondrial outer membrane;GO:0009507 chloroplast;GO:0005737 cytoplasm", "go_biological_process": "GO:0071555 cell wall organization;GO:0009555 pollen development;GO:0009860 pollen tube growth;GO:0033468 CMP-keto-3-deoxy-D-manno-octulosonic acid biosynthetic process;GO:0044281 small molecule metabolic process", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q9C920-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9SAG6-1", "uniprot_id": [ { "id": "Q9SAG6_ARATH", "url": "https://www.uniprot.org/uniprot/Q9SAG6", "type": "external" } ], "mass": 24244.0, "length": 213, "protein_name": "Snf1 kinase interactor-like protein", "gene_name": "F23A5.30; F23A5_30", "organism": "Arabidopsis", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "F23A5.30; F23A5_30", "gene_names_refseq": "", "protein_names_uniprotkb": "Snf1 kinase interactor-like protein", "protein_names_refseq": "", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G80940)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "11130712;23111157;25561503;27862469;28011693", "class_list": "", "function": "", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 3, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0016301 kinase activity", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0009909 regulation of flower development", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q9SAG6-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q84TH4-1", "uniprot_id": [ { "id": "SR45A_ARATH", "url": "https://www.uniprot.org/uniprot/Q84TH4", "type": "external" } ], "mass": 44978.0, "length": 382, "protein_name": "Serine/arginine-rich splicing factor SR45a", "gene_name": "SR45A", "organism": "Arabidopsis", "refseq_name": "RNA-binding (RRM/RBD/RNP motifs) family protein", "refseq_ac": [ { "id": "NP_001323001", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001323001", "type": "external" } ], "gene_names_uniprotkb": "SR45A; F22G5.31; F22G5_31; SR45a; TRA2", "gene_names_refseq": "F22G5.31; F22G5_31; SR45a; serine/arginine rich-like protein 45a", "protein_names_uniprotkb": "Serine/arginine-rich splicing factor SR45a; At-SR45A; AtSR45a; Protein TRANSFORMER2-like; atTra2", "protein_names_refseq": "RNA-binding (RRM/RBD/RNP motifs) family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G07350)", "pathway_count": 1, "publication_count": 15, "publication_id_list": "11130712;14593172;16807317;17556373;18463617;19238562;19734266;20466843;20884799;22291167;23111157;23132568;25561503;27862469;30833711", "class_list": "", "function": "Probable splicing factor involved in constitutive and/or alternative splicing events. May bridge the 5' and 3' components of the spliceosome., [UniProtKB, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 17, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "Q940S1;Q949Y9;Q9LNV4", "ec_number_list": [], "go_molecular_function": "GO:0003729 mRNA binding;GO:0003723 RNA binding", "go_cellular_component": "GO:0005634 nucleus;GO:0016607 nuclear speck;GO:0005681 spliceosomal complex;GO:0009507 chloroplast", "go_biological_process": "GO:0008380 RNA splicing;GO:0043484 regulation of RNA splicing;GO:0000398 mRNA splicing, via spliceosome;GO:0009644 response to high light intensity", "synthesized_glycan_count": 0, "hit_score": 1.6, "record_id": "Q84TH4-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000001001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q6S591-1", "uniprot_id": [ { "id": "JAG_ARATH", "url": "https://www.uniprot.org/uniprot/Q6S591", "type": "external" } ], "mass": 28379.0, "length": 253, "protein_name": "Zinc finger protein JAGGED", "gene_name": "JAG", "organism": "Arabidopsis", "refseq_name": "C2H2 and C2HC zinc fingers superfamily protein", "refseq_ac": [ { "id": "NP_177015", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_177015", "type": "external" } ], "gene_names_uniprotkb": "JAG; JAGGED; T26J14.5; T26J14_5", "gene_names_refseq": "JAGGED; JAG; T26J14.5; T26J14_5", "protein_names_uniprotkb": "Zinc finger protein JAGGED", "protein_names_refseq": "C2H2 and C2HC zinc fingers superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G68480)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "11130712;14973281;14973282;16192305;16554365;18156293;26390296;27862469", "class_list": "", "function": "Controls the morphogenesis of lateral organs. Functions in lateral organ shape and is sufficient to induce proliferation and growth of lateral organ tissue. Is necessary and sufficient for bract formation, but its expression is excluded from the cryptic bract, which could be a cause of bractless flowers in Arabidopsis. Participates with FIL and YAB3 in regulating valve margin development. Functions with JGL to define stamen and carpel shape. Functions with AS1 and AS2 in the sepal and petal primordia to repress boundary-specifying genes for normal development of the organs., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "Q9CA33", "ec_number_list": [], "go_molecular_function": "GO:0003700 DNA-binding transcription factor activity;GO:0008270 zinc ion binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0009908 flower development;GO:0009909 regulation of flower development;GO:0009965 leaf morphogenesis;GO:0010093 specification of floral organ identity;GO:0010158 abaxial cell fate specification", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "Q6S591-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q43348-1", "uniprot_id": [ { "id": "INVA3_ARATH", "url": "https://www.uniprot.org/uniprot/Q43348", "type": "external" } ], "mass": 72228.0, "length": 648, "protein_name": "Acid beta-fructofuranosidase 3, vacuolar", "gene_name": "BFRUCT3; VI1", "organism": "Arabidopsis", "refseq_name": "Glycosyl hydrolases family 32 protein", "refseq_ac": [ { "id": "NP_564798", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_564798", "type": "external" } ], "gene_names_uniprotkb": "BFRUCT3; VI1; BETAFRUCT3; F23N19.3; T3P18.21", "gene_names_refseq": "F23N19.3", "protein_names_uniprotkb": "Acid beta-fructofuranosidase 3, vacuolar; 3.2.1.26; AI 3; Acid invertase 3; Acid sucrose hydrolase 3; At beta fruct3; AtBETAFRUCT3; Inv-V3; VAC-INV 3; VI 3; Vacuolar invertase 3", "protein_names_refseq": "Glycosyl hydrolases family 32 protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G62660)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "11130712;14593172;14871666;15056893;16807755;19901034;27862469;9332372", "class_list": "glycogene;glycosylhydrolase", "function": "Possible role in the continued mobilization of sucrose to sink organs., [UniProtKB, UniProtKB]", "predicted_glycosites": 4, "predicted_n_glycosites": 3, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 4, "binding_glycan_count": 0, "secondary_ac_list": "Q42567;Q7DLY6;Q94BX0;Q9SI83;Q9SXD2", "ec_number_list": [], "go_molecular_function": "GO:0004564 beta-fructofuranosidase activity;GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds", "go_cellular_component": "GO:0005634 nucleus;GO:0016020 membrane;GO:0005775 vacuolar lumen;GO:0000325 plant-type vacuole", "go_biological_process": "GO:0009617 response to bacterium;GO:0009651 response to salt stress;GO:0009414 response to water deprivation;GO:0005985 sucrose metabolic process;GO:0009737 response to abscisic acid", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "Q43348-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000011001.001.10100", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q42547-1", "uniprot_id": [ { "id": "CATA3_ARATH", "url": "https://www.uniprot.org/uniprot/Q42547", "type": "external" } ], "mass": 56695.0, "length": 492, "protein_name": "Catalase-3", "gene_name": "CAT3", "organism": "Arabidopsis", "refseq_name": "catalase 3", "refseq_ac": [ { "id": "NP_564120", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_564120", "type": "external" } ], "gene_names_uniprotkb": "CAT3; ATCAT3; F2D10.40; F5M15.5; F5M15_5; SEN2; SENESCENCE 2; catalase 3", "gene_names_refseq": "ATCAT3; CAT3; F5M15.5; F5M15_5; SEN2; SENESCENCE 2; catalase 3", "protein_names_uniprotkb": "Catalase-3; 1.11.1.6", "protein_names_refseq": "catalase 3", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G20620)", "pathway_count": 1, "publication_count": 19, "publication_id_list": "11130712;14593172;16502469;17951448;19245862;19376835;22060019;23572148;23776212;23958864;24601666;25561503;25700484;25966761;27862469;28011693;29167316;8668130;9584109", "class_list": "", "function": "Occurs in almost all aerobically respiring organisms and serves to protect cells from the toxic effects of hydrogen peroxide., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 8, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q93VY9;Q9LDS9", "ec_number_list": [ { "id": "1.11.1.6", "url": "https://www.rhea-db.org/rhea/?query=ec:1.11.1.6", "type": "external" } ], "go_molecular_function": "GO:0003729 mRNA binding;GO:0020037 heme binding;GO:0050897 cobalt ion binding;GO:0004096 catalase activity;GO:0035605 peptidyl-cysteine S-nitrosylase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005739 mitochondrion;GO:0005777 peroxisome;GO:0005829 cytosol", "go_biological_process": "GO:0009409 response to cold;GO:0042542 response to hydrogen peroxide;GO:0042744 hydrogen peroxide catabolic process;GO:0009416 response to light stimulus;GO:0006995 cellular response to nitrogen starvation", "synthesized_glycan_count": 0, "hit_score": 2.0, "record_id": "Q42547-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8LFT2-1", "uniprot_id": [ { "id": "DRP3B_ARATH", "url": "https://www.uniprot.org/uniprot/Q8LFT2", "type": "external" } ], "mass": 86644.0, "length": 780, "protein_name": "Dynamin-related protein 3B", "gene_name": "DRP3B", "organism": "Arabidopsis", "refseq_name": "dynamin related protein", "refseq_ac": [ { "id": "NP_565362", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_565362", "type": "external" } ], "gene_names_uniprotkb": "DRP3B; ADL2B; T22C12.1; T22C12.5; T22C12_5; dynamin related protein", "gene_names_refseq": "ADL2B; DRP3B; T22C12.5; T22C12_5; dynamin related protein", "protein_names_uniprotkb": "Dynamin-related protein 3B; Dynamin-like protein 2b", "protein_names_refseq": "dynamin related protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G14080); (ath:AT2G14120)", "pathway_count": 2, "publication_count": 16, "publication_id_list": "10617197;11960028;14593172;14750516;14754924;14988495;18463617;18559960;18785999;20179140;20466843;22074104;22223895;23572148;25561503;27862469", "class_list": "", "function": "Involved in the control of mitochondrial and peroxisomal division and morphology., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 7, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q8LPH8;Q8S8A4;Q8S943;Q9SI47", "ec_number_list": [ { "id": "3.2.2.6", "url": "https://www.rhea-db.org/rhea/?query=ec:3.2.2.6", "type": "external" }, { "id": "3.2.2.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.2.2.-", "type": "external" } ], "go_molecular_function": "GO:0003924 GTPase activity;GO:0005525 GTP binding;GO:0008017 microtubule binding;GO:0016787 hydrolase activity;GO:0043531 ADP binding", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005739 mitochondrion;GO:0005777 peroxisome;GO:0005874 microtubule;GO:0005886 plasma membrane", "go_biological_process": "GO:0016559 peroxisome fission;GO:0051301 cell division;GO:0007031 peroxisome organization;GO:0051707 response to other organism;GO:0006952 defense response", "synthesized_glycan_count": 0, "hit_score": 1.7, "record_id": "Q8LFT2-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9SJ60-1", "uniprot_id": [ { "id": "Q9SJ60_ARATH", "url": "https://www.uniprot.org/uniprot/Q9SJ60", "type": "external" } ], "mass": 21238.0, "length": 192, "protein_name": "Mal d 1-associated protein", "gene_name": "F11F19.19; F11F19_19", "organism": "Arabidopsis", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "F11F19.19; F11F19_19", "gene_names_refseq": "", "protein_names_uniprotkb": "Mal d 1-associated protein", "protein_names_refseq": "", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G35900)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "10617197;27862469", "class_list": "", "function": "", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "Q9SJ60-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9ZUZ2-1", "uniprot_id": [ { "id": "CAMK3_ARATH", "url": "https://www.uniprot.org/uniprot/Q9ZUZ2", "type": "external" } ], "mass": 66600.0, "length": 595, "protein_name": "CDPK-related kinase 3", "gene_name": "CRK3", "organism": "Arabidopsis", "refseq_name": "CDPK-related kinase 3", "refseq_ac": [ { "id": "NP_182193", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_182193", "type": "external" } ], "gene_names_uniprotkb": "CRK3; ATCRK3; CDPK-related kinase 3; CK; CaMK4; T3A4.8", "gene_names_refseq": "ATCRK3; CDPK-related kinase 3; CRK3; T3A4.8", "protein_names_uniprotkb": "CDPK-related kinase 3; 2.7.11.1; AtCK; AtCRK3; Calcium/calmodulin-dependent protein kinase 4", "protein_names_refseq": "CDPK-related kinase 3", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G46700)", "pathway_count": 1, "publication_count": 13, "publication_id_list": "10617197;12805596;12959135;14593172;16472779;17317660;17978582;22645532;23111157;23572148;27862469;28011693;30833711", "class_list": "", "function": "May play a role in signal transduction pathways that involve calcium as a second messenger (By similarity). Serine/threonine kinase that phosphorylates histone H3 an GLN1-1., [UniProtKB, UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 3, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q56WX8;Q8W107;Q8W562", "ec_number_list": [ { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.3.2.27", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.2.27", "type": "external" }, { "id": "2.7.10.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.-", "type": "external" }, { "id": "3.1.4.46", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.4.46", "type": "external" }, { "id": "2.7.11.25", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.25", "type": "external" }, { "id": "2.7.11.22", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.22", "type": "external" }, { "id": "2.7.10.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.1", "type": "external" }, { "id": "2.7.11.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.-", "type": "external" }, { "id": "2.7.11.24", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.24", "type": "external" }, { "id": "2.7.12.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.1", "type": "external" }, { "id": "2.7.11.23", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.23", "type": "external" }, { "id": "2.7.12.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.2", "type": "external" }, { "id": "2.7.-.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.-.-", "type": "external" }, { "id": "3.1.26.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.26.-", "type": "external" }, { "id": "3.1.3.16", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.16", "type": "external" }, { "id": "2.7.11.34", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.34", "type": "external" }, { "id": "4.6.1.2", "url": "https://www.rhea-db.org/rhea/?query=ec:4.6.1.2", "type": "external" } ], "go_molecular_function": "GO:0009931 calcium-dependent protein serine/threonine kinase activity;GO:0004674 protein serine/threonine kinase activity;GO:0005516 calmodulin binding;GO:0005524 ATP binding;GO:0005509 calcium ion binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005886 plasma membrane", "go_biological_process": "GO:0035556 intracellular signal transduction;GO:0046777 protein autophosphorylation;GO:0010150 leaf senescence;GO:0071215 cellular response to abscisic acid stimulus", "synthesized_glycan_count": 0, "hit_score": 1.4, "record_id": "Q9ZUZ2-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q94AY3-1", "uniprot_id": [ { "id": "DRIP2_ARATH", "url": "https://www.uniprot.org/uniprot/Q94AY3", "type": "external" } ], "mass": 47190.0, "length": 420, "protein_name": "E3 ubiquitin protein ligase DRIP2", "gene_name": "DRIP2", "organism": "Arabidopsis", "refseq_name": "DREB2A-interacting protein 2", "refseq_ac": [ { "id": "NP_001323803", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001323803", "type": "external" } ], "gene_names_uniprotkb": "DRIP2; BMI1A; DREB2A-interacting protein 2; T6B20.7; T6B20_7", "gene_names_refseq": "BMI1A; DREB2A-interacting protein 2; DRIP2; T6B20.7; T6B20_7", "protein_names_uniprotkb": "E3 ubiquitin protein ligase DRIP2; 2.3.2.27; DREB2A-interacting protein 2; RING-type E3 ubiquitin transferase DRIP2", "protein_names_refseq": "DREB2A-interacting protein 2", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G30580)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "10617197;14593172;18552202;27862469", "class_list": "", "function": "E3 ubiquitin-protein ligase that acts as a negative regulator of the response to water stress. Mediates ubiquitination and subsequent proteasomal degradation of the drought-induced transcriptional activator DREB2A. Functionally redundant with DRIP1., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O04337", "ec_number_list": [], "go_molecular_function": "GO:0008270 zinc ion binding;GO:0061630 ubiquitin protein ligase activity;GO:0004842 ubiquitin-protein transferase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm", "go_biological_process": "GO:0016567 protein ubiquitination;GO:0009414 response to water deprivation;GO:0051865 protein autoubiquitination", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "Q94AY3-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8RXD6-1", "uniprot_id": [ { "id": "BRE1A_ARATH", "url": "https://www.uniprot.org/uniprot/Q8RXD6", "type": "external" } ], "mass": 99719.0, "length": 878, "protein_name": "E3 ubiquitin-protein ligase BRE1-like 1", "gene_name": "HUB1", "organism": "Arabidopsis", "refseq_name": "histone mono-ubiquitination 1", "refseq_ac": [ { "id": "NP_182022", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_182022", "type": "external" } ], "gene_names_uniprotkb": "HUB1; BRE1A; RDO4; REDUCED DORMANCY 4; T13E15.23; T14P1.24; T14P1.25; T14P1_25; histone mono-ubiquitination 1", "gene_names_refseq": "AT2G44960; HUB1; RDO4; REDUCED DORMANCY 4; T14P1.25; T14P1_25; histone mono-ubiquitination 1", "protein_names_uniprotkb": "E3 ubiquitin-protein ligase BRE1-like 1; 2.3.2.27; AtBRE1; AtHUB1; Protein HISTONE MONOUBIQUITINATION 1; Protein REDUCED DORMANCY 4; RING-type E3 ubiquitin transferase BRE1-like 1", "protein_names_refseq": "histone mono-ubiquitination 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G44950)", "pathway_count": 1, "publication_count": 12, "publication_id_list": "10617197;12535538;14593172;17329563;17329565;19286969;21799800;23111157;23776212;25561503;27862469;30833711", "class_list": "", "function": "E3 ubiquitin-protein ligase that monoubiquitinates H2B to form H2BK143ub1. H2BK143ub1 gives a specific tag for epigenetic transcriptional activation and is also prerequisite for H3K4me and maybe H3K79me. It thereby plays a central role in histone code and gene regulation. Forms a ubiquitin ligase complex in cooperation with the E2 enzyme UBC2/RAD6. Required for the regulation of flowering time and defense against necrotrophic fungal pathogens (PubMed:12535538, PubMed:17329563, PubMed:17329565, PubMed:19286969). Involved in the control of seed dormancy and germination (PubMed:21799800)., [UniProtKB, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O22156;O22157", "ec_number_list": [], "go_molecular_function": "GO:0008270 zinc ion binding;GO:0042802 identical protein binding;GO:0042803 protein homodimerization activity;GO:0061630 ubiquitin protein ligase activity;GO:0004842 ubiquitin-protein transferase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005739 mitochondrion;GO:0033503 HULC complex", "go_biological_process": "GO:0045087 innate immune response;GO:0051301 cell division;GO:0010389 regulation of G2/M transition of mitotic cell cycle;GO:0051781 positive regulation of cell division;GO:0050832 defense response to fungus", "synthesized_glycan_count": 0, "hit_score": 1.3, "record_id": "Q8RXD6-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q501D8-1", "uniprot_id": [ { "id": "C79B3_ARATH", "url": "https://www.uniprot.org/uniprot/Q501D8", "type": "external" } ], "mass": 61438.0, "length": 543, "protein_name": "Tryptophan N-monooxygenase 2", "gene_name": "CYP79B3", "organism": "Arabidopsis", "refseq_name": "cytochrome P450, family 79, subfamily B, polypeptide 3", "refseq_ac": [ { "id": "NP_001323954", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001323954", "type": "external" } ], "gene_names_uniprotkb": "CYP79B3; T26C19.1; cytochrome P450; family 79; polypeptide 3; subfamily B", "gene_names_refseq": "''cytochrome P450; CYP79B3; T26C19.1; cytochrome P450; family 79; polypeptide 3''; polypeptide 3; subfamily B", "protein_names_uniprotkb": "Tryptophan N-monooxygenase 2; 1.14.14.156; Cytochrome P450 79B3; Tryptophan N-hydroxylase 2", "protein_names_refseq": "cytochrome P450, family 79, subfamily B, polypeptide 3", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G22330)", "pathway_count": 1, "publication_count": 3, "publication_id_list": "10617197;10681464;27862469", "class_list": "", "function": "Converts tryptophan to indole-3-acetaldoxime, a precursor for tryptophan derived glucosinolates and indole-3-acetic acid (IAA)., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q0WMS4;Q9SK00", "ec_number_list": [ { "id": "1.14.14.156", "url": "https://www.rhea-db.org/rhea/?query=ec:1.14.14.156", "type": "external" } ], "go_molecular_function": "GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen;GO:0005506 iron ion binding;GO:0020037 heme binding;GO:0090489 tryptophan N-monooxygenase activity;GO:0004497 monooxygenase activity", "go_cellular_component": "GO:0016020 membrane;GO:0009507 chloroplast", "go_biological_process": "GO:0006569 L-tryptophan catabolic process;GO:0006952 defense response;GO:0009617 response to bacterium;GO:0009611 response to wounding;GO:0042742 defense response to bacterium", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "Q501D8-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q5D869-1", "uniprot_id": [ { "id": "NRPE1_ARATH", "url": "https://www.uniprot.org/uniprot/Q5D869", "type": "external" } ], "mass": 218228.0, "length": 1976, "protein_name": "DNA-directed RNA polymerase V subunit 1", "gene_name": "NRPD1B; NRPE1", "organism": "Arabidopsis", "refseq_name": "nuclear RNA polymerase D1B", "refseq_ac": [ { "id": "NP_181532", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_181532", "type": "external" } ], "gene_names_uniprotkb": "NRPD1B; NRPE1; ATNRPD1B; DMS5; DRD3; NRPD1b; NRPE1; RMD1; RPE1; T28M21.19; T28M21_19; nuclear RNA polymerase D1B", "gene_names_refseq": "ATNRPD1B; DEFECTIVE IN MERISTEM SILENCING 5; DMS5; DRD3; NRPD1B; NRPE1; T28M21.19; T28M21_19; nuclear RNA polymerase D1B", "protein_names_uniprotkb": "DNA-directed RNA polymerase V subunit 1; 2.7.7.6; AtNRPD1b; DNA-directed RNA polymerase D subunit 1b; DNA-directed RNA polymerase E subunit 1; Nuclear RNA polymerase D 1b; Nuclear RNA polymerase E 1; POL IV 1; Protein DEFECTIVE IN MERISTEM SILENCING 5; Protein DEFECTIVE IN RNA-DIRECTED DNA METHYLATION 3; Protein RNA-DIRECTED DNA METHYLATION DEFECTIVE 1; RNA polymerase IV subunit 1", "protein_names_refseq": "nuclear RNA polymerase D1B", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G40030)", "pathway_count": 1, "publication_count": 21, "publication_id_list": "10617197;15766525;15924141;16140984;16839878;16839879;17160640;17360559;17449119;18287047;18425128;18433438;18667720;19110459;19141635;19204117;20338883;21150311;24463519;25561503;27862469", "class_list": "", "function": "DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Largest and catalytic component of RNA polymerase V involved in RNA-directed DNA methylation-dependent (RdDM) silencing of endogenous repeated sequences, including transposable elements. Also required for full erasure of methylation when the RNA trigger is withdrawn. Seems also involved in the synthesis of short-interfering RNAs (siRNA). Essential component of a self-reinforcing loop coupling de novo DNA methylation to siRNA production. Involved in the maintenance of post-transcriptional RNA silencing., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 3, "reported_mutagensis": 2, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "O04206;O04207;Q1L5X4", "ec_number_list": [ { "id": "2.7.7.6", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.7.6", "type": "external" }, { "id": "2.7.7.48", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.7.48", "type": "external" } ], "go_molecular_function": "GO:0003677 DNA binding;GO:0046872 metal ion binding;GO:0003899 DNA-directed RNA polymerase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005730 nucleolus;GO:0016604 nuclear body;GO:0030880 RNA polymerase complex;GO:0000418 RNA polymerase IV complex", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0035194 regulatory ncRNA-mediated post-transcriptional gene silencing;GO:0030422 siRNA processing;GO:0050832 defense response to fungus", "synthesized_glycan_count": 0, "hit_score": 2.2, "record_id": "Q5D869-1", "record_type": "protein", "filter_code": "0000000.0100101.010000.100000000000000000.0000000001001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q5BPS3-1", "uniprot_id": [ { "id": "DOR_ARATH", "url": "https://www.uniprot.org/uniprot/Q5BPS3", "type": "external" } ], "mass": 44770.0, "length": 387, "protein_name": "F-box protein DOR", "gene_name": "DOR", "organism": "Arabidopsis", "refseq_name": "F-box and associated interaction domains-containing protein", "refseq_ac": [ { "id": "NP_180705", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_180705", "type": "external" } ], "gene_names_uniprotkb": "DOR; DROUGHT TOLERANCE REPRESSOR; T28P16.4; T28P16_4", "gene_names_refseq": "DOR; DROUGHT TOLERANCE REPRESSOR; T28P16.4; T28P16_4", "protein_names_uniprotkb": "F-box protein DOR; Protein DROUGHT TOLERANCE REPRESSOR", "protein_names_refseq": "F-box and associated interaction domains-containing protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G31470)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "10617197;14993207;16244158;18835996;27862469", "class_list": "", "function": "Component of SCF(ASK-cullin-F-box) E3 ubiquitin ligase complexes, which may mediate the ubiquitination and subsequent proteasomal degradation of target proteins (By similarity). Negative regulator of guard cell abscisic acid (ABA) signaling, especially during drought stress., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q84RJ0;Q9SIC2", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0016567 protein ubiquitination;GO:0009414 response to water deprivation;GO:0042631 cellular response to water deprivation;GO:0009737 response to abscisic acid;GO:0009738 abscisic acid-activated signaling pathway", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q5BPS3-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9SI38-1", "uniprot_id": [ { "id": "ANR1_ARATH", "url": "https://www.uniprot.org/uniprot/Q9SI38", "type": "external" } ], "mass": 26803.0, "length": 234, "protein_name": "MADS-box transcription factor ANR1", "gene_name": "AGL44; ANR1", "organism": "Arabidopsis", "refseq_name": "AGAMOUS-like 44", "refseq_ac": [ { "id": "NP_179033", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_179033", "type": "external" } ], "gene_names_uniprotkb": "AGL44; ANR1; AGAMOUS-like 44; AGL44; ANR1; F15N24.5; F15N24_5", "gene_names_refseq": "AGAMOUS-like 44; AGL44; ANR1; ARABIDOPSIS NITRATE REGULATED 1; F15N24.5; F15N24_5", "protein_names_uniprotkb": "MADS-box transcription factor ANR1; Protein AGAMOUS-LIKE 44; Protein ARABIDOPSIS NITRATE REGULATED 1", "protein_names_refseq": "AGAMOUS-like 44", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G14210)", "pathway_count": 1, "publication_count": 12, "publication_id_list": "10617197;10938795;12837945;14593172;15667327;15805477;16021502;16339770;17148611;17578866;27862469;9430595", "class_list": "", "function": "Probable transcription factor. Required for root plasticity in response to nitrate, NO(3)(-). Promotes lateral root growth in a NRT1.1-dependent manner., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O49351", "ec_number_list": [], "go_molecular_function": "GO:0003700 DNA-binding transcription factor activity;GO:0046983 protein dimerization activity;GO:0000976 transcription cis-regulatory region binding;GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding;GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006357 regulation of transcription by RNA polymerase II;GO:0007584 response to nutrient;GO:0045944 positive regulation of transcription by RNA polymerase II;GO:0010167 response to nitrate", "synthesized_glycan_count": 0, "hit_score": 1.3, "record_id": "Q9SI38-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9ZPS3-1", "uniprot_id": [ { "id": "DCE4_ARATH", "url": "https://www.uniprot.org/uniprot/Q9ZPS3", "type": "external" } ], "mass": 56005.0, "length": 493, "protein_name": "Glutamate decarboxylase 4", "gene_name": "GAD4", "organism": "Arabidopsis", "refseq_name": "glutamate decarboxylase 4", "refseq_ac": [ { "id": "NP_178310", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_178310", "type": "external" } ], "gene_names_uniprotkb": "GAD4; F14H20.8; F14H20_8; glutamate decarboxylase 4", "gene_names_refseq": "F14H20.8; F14H20_8; GAD4; glutamate decarboxylase 4", "protein_names_uniprotkb": "Glutamate decarboxylase 4; 4.1.1.15; GAD 4", "protein_names_refseq": "glutamate decarboxylase 4", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G02010)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "10529826;10617197;14593172;18077464;18433157;20122158;23172892;23572148;25561503;27862469", "class_list": "", "function": "Catalyzes the production of GABA. The calmodulin-binding is calcium-dependent and it is proposed that this may, directly or indirectly, form a calcium regulated control of GABA biosynthesis (By similarity)., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [ { "id": "4.1.1.15", "url": "https://www.rhea-db.org/rhea/?query=ec:4.1.1.15", "type": "external" } ], "go_molecular_function": "GO:0005516 calmodulin binding;GO:0030170 pyridoxal phosphate binding;GO:0004351 glutamate decarboxylase activity", "go_cellular_component": "GO:0005739 mitochondrion;GO:0005829 cytosol;GO:0009507 chloroplast", "go_biological_process": "GO:0006538 L-glutamate catabolic process;GO:0006536 glutamate metabolic process", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "Q9ZPS3-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q94KL5-1", "uniprot_id": [ { "id": "BLH4_ARATH", "url": "https://www.uniprot.org/uniprot/Q94KL5", "type": "external" } ], "mass": 69271.0, "length": 627, "protein_name": "BEL1-like homeodomain protein 4", "gene_name": "BLH4", "organism": "Arabidopsis", "refseq_name": "BEL1-like homeodomain 4", "refseq_ac": [ { "id": "NP_001031404", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001031404", "type": "external" } ], "gene_names_uniprotkb": "BLH4; BEL1-like homeodomain 4; F27L4.6; F27L4_6; SAW2; SAWTOOTH 2", "gene_names_refseq": "BEL1-like homeodomain 4; BLH4; F27L4.6; F27L4_6; SAW2; SAWTOOTH 2", "protein_names_uniprotkb": "BEL1-like homeodomain protein 4; BEL1-like protein 4; Protein SAWTOOTH 2", "protein_names_refseq": "BEL1-like homeodomain 4", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G23760)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "10617197;14593172;15120075;15781858;17873098;18398054;27862469", "class_list": "", "function": "Transcription factor that establishes leaf shape by repressing growth in specific subdomains of the leaf. Negatively regulates knox homeobox gene KNAT1/BP expression., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O64826;Q56WI2", "ec_number_list": [], "go_molecular_function": "GO:0003700 DNA-binding transcription factor activity;GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding;GO:0003677 DNA binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006357 regulation of transcription by RNA polymerase II;GO:0009965 leaf morphogenesis;GO:0048363 mucilage pectin metabolic process;GO:0006355 regulation of DNA-templated transcription", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q94KL5-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9ZW86-1", "uniprot_id": [ { "id": "P4H1_ARATH", "url": "https://www.uniprot.org/uniprot/Q9ZW86", "type": "external" } ], "mass": 31530.0, "length": 283, "protein_name": "Prolyl 4-hydroxylase 1", "gene_name": "AT-P4H-1; P4H1", "organism": "Arabidopsis", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "AT-P4H-1; P4H1; MFL8; P4H isoform 1; PROLYL 4-HYDROXYLASE", "gene_names_refseq": "", "protein_names_uniprotkb": "Prolyl 4-hydroxylase 1; 1.14.11.2; AtP4H-1; AtP4H1", "protein_names_refseq": "", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G43080)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "10617197;11910074;11976332;14593172;19277739;27862469", "class_list": "", "function": "Catalyzes the post-translational formation of 4-hydroxyproline in -Xaa-Pro-Gly- sequences in proline-rich peptide sequences of plant glycoproteins and other proteins. Hydroxylates preferentially prolines in second positions in the -Pro-Pro-Gly-triplets. Hydroxyprolines are important constituent of many plant cell wall glycoproteins such as extensins, hydroxyproline-rich glycoproteins, lectins and arabinogalactan proteins. Can hydroxylate collagen-like peptides and hypoxia-inducible transcription factor peptides., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 11, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [ { "id": "1.14.11.2", "url": "https://www.rhea-db.org/rhea/?query=ec:1.14.11.2", "type": "external" } ], "go_molecular_function": "GO:0005506 iron ion binding;GO:0031418 L-ascorbic acid binding;GO:0004656 procollagen-proline 4-dioxygenase activity;GO:0046872 metal ion binding", "go_cellular_component": "GO:0005576 extracellular region;GO:0005783 endoplasmic reticulum;GO:0005794 Golgi apparatus;GO:0005789 endoplasmic reticulum membrane;GO:0000137 Golgi cis cisterna", "go_biological_process": "GO:0018401 peptidyl-proline hydroxylation to 4-hydroxy-L-proline", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q9ZW86-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q66GR3-1", "uniprot_id": [ { "id": "BH130_ARATH", "url": "https://www.uniprot.org/uniprot/Q66GR3", "type": "external" } ], "mass": 39908.0, "length": 359, "protein_name": "Transcription factor bHLH130", "gene_name": "BHLH130; FBH4", "organism": "Arabidopsis", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "BHLH130; FBH4; AKS3; EN69; FLOWERING BHLH 4; T24P15.19; T24P15_19", "gene_names_refseq": "", "protein_names_uniprotkb": "Transcription factor bHLH130; AtbHLH130; Basic helix-loop-helix protein 130; Transcription factor EN 69; bHLH 130; bHLH transcription factor bHLH130", "protein_names_refseq": "", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G42280)", "pathway_count": 1, "publication_count": 11, "publication_id_list": "10617197;12679534;12897250;14600211;19376835;21768351;25561503;26091701;27862469;28011693;30833711", "class_list": "", "function": "", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 4, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O48535;Q3E6N5", "ec_number_list": [], "go_molecular_function": "GO:0003700 DNA-binding transcription factor activity;GO:0046983 protein dimerization activity;GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding;GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific;GO:0000987 cis-regulatory region sequence-specific DNA binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006357 regulation of transcription by RNA polymerase II;GO:0006355 regulation of DNA-templated transcription;GO:0010468 regulation of gene expression;GO:0006808 regulation of nitrogen utilization", "synthesized_glycan_count": 0, "hit_score": 1.2, "record_id": "Q66GR3-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q42093-1", "uniprot_id": [ { "id": "AB2C_ARATH", "url": "https://www.uniprot.org/uniprot/Q42093", "type": "external" } ], "mass": 182130.0, "length": 1623, "protein_name": "ABC transporter C family member 2", "gene_name": "ABCC2", "organism": "Arabidopsis", "refseq_name": "multidrug resistance-associated protein 2", "refseq_ac": [ { "id": "NP_001189675", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001189675", "type": "external" } ], "gene_names_uniprotkb": "ABCC2; ABC TRANSPORTER; ATMRP2; ATP-binding cassette C2; AtABCC2; EST4; MRP2; T29F13.13; T29F13_13", "gene_names_refseq": "ABC TRANSPORTER; ABCC2; ATMRP2; ATP-binding cassette C2; Arabidopsis thaliana ATP-binding cassette C2; AtABCC2; EST4; MRP2; T29F13.13; T29F13_13; multidrug resistance-associated protein 2", "protein_names_uniprotkb": "ABC transporter C family member 2; 7.6.2.2; ABC transporter ABCC.2; ATP-energized glutathione S-conjugate pump 2; AtABCC2; Glutathione S-conjugate-transporting ATPase 2; Multidrug resistance-associated protein 2", "protein_names_refseq": "multidrug resistance-associated protein 2", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G34660)", "pathway_count": 1, "publication_count": 14, "publication_id_list": "10617197;11115509;11346655;11855639;12430019;15133126;17151019;18299247;22060019;27419465;27862469;9271206;9490749;9528668", "class_list": "", "function": "Pump for glutathione S-conjugates. Mediates the transport of S-conjugates such as GSH, S-(2,4-dinitrophenyl)-glutathione (DNP-GS), GSSG, cyanidin 3-glucoside-GS (C3G-GS) and metolachlor-GS (MOC-GS), glucuronides such as 17-beta-estradiol 17-(beta-D-glucuronide) (E(2)17betaG), and of the chlorophyll catabolite such as B.napus nonfluorescent chlorophyll catabolite (Bn-NCC-1)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O22449;O24526;O48907;O48908;O64590", "ec_number_list": [], "go_molecular_function": "GO:0005516 calmodulin binding;GO:0005524 ATP binding;GO:0042626 ATPase-coupled transmembrane transporter activity;GO:0008559 ABC-type xenobiotic transporter activity;GO:0016887 ATP hydrolysis activity", "go_cellular_component": "GO:0005783 endoplasmic reticulum;GO:0005774 vacuolar membrane;GO:0005773 vacuole;GO:0000325 plant-type vacuole", "go_biological_process": "GO:1902418 (+)-abscisic acid D-glucopyranosyl ester transmembrane transport", "synthesized_glycan_count": 0, "hit_score": 1.5, "record_id": "Q42093-1", "record_type": "protein", "filter_code": "0000000.0000101.010000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q56YN8-1", "uniprot_id": [ { "id": "SMC3_ARATH", "url": "https://www.uniprot.org/uniprot/Q56YN8", "type": "external" } ], "mass": 139371.0, "length": 1204, "protein_name": "Structural maintenance of chromosomes protein 3", "gene_name": "SMC3; TTN7", "organism": "Arabidopsis", "refseq_name": "Structural maintenance of chromosomes (SMC) family protein", "refseq_ac": [ { "id": "NP_001077968", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001077968", "type": "external" } ], "gene_names_uniprotkb": "SMC3; TTN7; SMC3; T22O13.6; TITAN7; TTN7", "gene_names_refseq": "SMC3; STRUCTURAL MAINTENANCE OF CHROMOSOMES 3; T22O13.6; TITAN7; TTN7", "protein_names_uniprotkb": "Structural maintenance of chromosomes protein 3; Chromosome segregation protein SMC-3; Cohesin complex subunit SMC-3; Protein TITAN7; SMC protein 3; SMC-3", "protein_names_refseq": "Structural maintenance of chromosomes (SMC) family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G27170)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "10617197;11788751;11846874;14660695;15972315;19533160;27862469", "class_list": "", "function": "Central component of cohesin, a complex required for chromosome cohesion during the cell cycle. The cohesin complex may form a large proteinaceous ring within which sister chromatids can be trapped. At anaphase, the complex is cleaved and dissociates from chromatin, allowing sister chromatids to segregate. Cohesion is coupled to DNA replication and is involved in DNA repair. The cohesin complex also plays an important role in spindle pole assembly during mitosis and in chromosomes movement (By similarity). Essential protein plant viability. Required for chromosome segregation (e.g. sister chromatid alignment) and cell division during embryogenesis., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q0WNE4;Q0WWN8;Q56ZJ9;Q6QU76;Q8H2D2;Q8S8B4;Q9SHT1", "ec_number_list": [], "go_molecular_function": "GO:0003682 chromatin binding;GO:0005524 ATP binding;GO:0016887 ATP hydrolysis activity;GO:0003690 double-stranded DNA binding", "go_cellular_component": "GO:0030892 mitotic cohesin complex;GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005819 spindle;GO:0000775 chromosome, centromeric region", "go_biological_process": "GO:0006281 DNA repair;GO:0007059 chromosome segregation;GO:0051301 cell division;GO:0051321 meiotic cell cycle;GO:0007064 mitotic sister chromatid cohesion", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q56YN8-1", "record_type": "protein", "filter_code": "0000000.0000101.010000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q6ID76-1", "uniprot_id": [ { "id": "GLV7_ARATH", "url": "https://www.uniprot.org/uniprot/Q6ID76", "type": "external" } ], "mass": 12647.0, "length": 110, "protein_name": "Protein GOLVEN 7", "gene_name": "GLV7; RGF3", "organism": "Arabidopsis", "refseq_name": "root meristem growth factor", "refseq_ac": [ { "id": "NP_001324399", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001324399", "type": "external" } ], "gene_names_uniprotkb": "GLV7; RGF3; CLEL3; F3C11.1; F3C11_1; GLV7; GOLVEN 7; RGF3; root meristem growth factor 3", "gene_names_refseq": "F3C11.1; F3C11_1; GLV7; GOLVEN 7; RGF3; root meristem growth factor 3", "protein_names_uniprotkb": "Protein GOLVEN 7; AtRGF3; CLAVATA3/ESR (CLE)-related protein CLEL3; CLE-Like protein 3; Root meristem growth factor 3", "protein_names_refseq": "root meristem growth factor", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G04025)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "10617197;20798316;22307643;23370719;27001831;27862469", "class_list": "", "function": "Signaling peptide (root growth factor) that maintains the postembryonic root stem cell niche (PubMed:20798316, PubMed:23370719). Regulates the pattern of root growth and lateral root development by modulating the length and the number of cortical cells in the root apical meristem (RAM), and the anticlinal asymmetric cell divisions in lateral root initiation cells (By similarity)., [UniProtKB, PubMed, PubMed, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q8S8B2", "ec_number_list": [], "go_molecular_function": "GO:0008083 growth factor activity", "go_cellular_component": "GO:0005576 extracellular region;GO:0005615 extracellular space;GO:0005634 nucleus", "go_biological_process": "GO:0009786 regulation of asymmetric cell division;GO:0008284 positive regulation of cell population proliferation;GO:0010628 positive regulation of gene expression;GO:0030154 cell differentiation;GO:0010082 regulation of root meristem growth", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q6ID76-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q680B9-1", "uniprot_id": [ { "id": "PRRP2_ARATH", "url": "https://www.uniprot.org/uniprot/Q680B9", "type": "external" } ], "mass": 59228.0, "length": 528, "protein_name": "Proteinaceous RNase P 2", "gene_name": "PRORP2", "organism": "Arabidopsis", "refseq_name": "proteinaceous RNase P 2", "refseq_ac": [ { "id": "NP_179256", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_179256", "type": "external" } ], "gene_names_uniprotkb": "PRORP2; T24I21.6; T24I21_6; proteinaceous RNase P 2", "gene_names_refseq": "PRORP2; T24I21.6; T24I21_6; proteinaceous RNase P 2", "protein_names_uniprotkb": "Proteinaceous RNase P 2; 3.1.26.5", "protein_names_refseq": "proteinaceous RNase P 2", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G16650)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "10617197;18463617;20466843;20473316;22549728;25561503;26655022;27862469;28011693;30833711", "class_list": "", "function": "Endonuclease RNase P responsible for the 5' maturation of tRNA precursors (PubMed:22549728, PubMed:26655022). Preferentially binds precursor tRNAs containing short 5' leaders and 3' trailers (PubMed:26655022). Also involved in the maturation of mRNA and small nucleolar RNA (snoRNA) (PubMed:22549728)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 6, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9SLF2", "ec_number_list": [], "go_molecular_function": "GO:0046872 metal ion binding;GO:0004526 ribonuclease P activity", "go_cellular_component": "GO:0005634 nucleus;GO:0009507 chloroplast", "go_biological_process": "GO:0006397 mRNA processing;GO:0001682 tRNA 5'-leader removal;GO:0043144 sno(s)RNA processing", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "Q680B9-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9M4T3-1", "uniprot_id": [ { "id": "HDT4_ARATH", "url": "https://www.uniprot.org/uniprot/Q9M4T3", "type": "external" } ], "mass": 22651.0, "length": 203, "protein_name": "Histone deacetylase HDT4", "gene_name": "HDT4", "organism": "Arabidopsis", "refseq_name": "histone deacetylase-related / HD-like protein", "refseq_ac": [ { "id": "NP_565661", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_565661", "type": "external" } ], "gene_names_uniprotkb": "HDT4; F15K20.6; F15K20_6; HD2D; HDA13; HDT04; HISTONE DEACETYLASE 13; HISTONE DEACETYLASE; histone deacetylase 2D", "gene_names_refseq": "F15K20.6; F15K20_6; HD2D; HDA13; HDT04; HDT4; HISTONE DEACETYLASE 13; HISTONE DEACETYLASE; histone deacetylase 2D", "protein_names_uniprotkb": "Histone deacetylase HDT4; HD-tuins protein 4; Histone deacetylase 2d", "protein_names_refseq": "histone deacetylase-related / HD-like protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G27840)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "10617197;11469594;12466527;14593172;15144374;16176989;27862469", "class_list": "", "function": "Probably mediates the deacetylation of lysine residues lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q0WN36;Q9ZUY5", "ec_number_list": [], "go_molecular_function": "GO:0016787 hydrolase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005730 nucleolus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006325 chromatin organization;GO:0010162 seed dormancy process", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q9M4T3-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9ZSJ6-1", "uniprot_id": [ { "id": "GRP3S_ARATH", "url": "https://www.uniprot.org/uniprot/Q9ZSJ6", "type": "external" } ], "mass": 11586.0, "length": 116, "protein_name": "Glycine-rich protein 3 short isoform", "gene_name": "GRP3S", "organism": "Arabidopsis", "refseq_name": "glycine-rich protein 3 short isoform", "refseq_ac": [ { "id": "NP_565325", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_565325", "type": "external" } ], "gene_names_uniprotkb": "GRP3S; F16J10.7; F16J10_7", "gene_names_refseq": "F16J10.7; F16J10_7; GRP3S; glycine-rich protein 3 short isoform", "protein_names_uniprotkb": "Glycine-rich protein 3 short isoform", "protein_names_refseq": "glycine-rich protein 3 short isoform", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G05380)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "10617197;11335717;14593172;27862469", "class_list": "", "function": "Regulates the function of the receptor protein kinase WAK1., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q94A93;Q9SHT6", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005576 extracellular region;GO:0005739 mitochondrion", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "Q9ZSJ6-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9SJJ3-1", "uniprot_id": [ { "id": "BLH8_ARATH", "url": "https://www.uniprot.org/uniprot/Q9SJJ3", "type": "external" } ], "mass": 65775.0, "length": 584, "protein_name": "BEL1-like homeodomain protein 8", "gene_name": "BLH8", "organism": "Arabidopsis", "refseq_name": "BEL1-like homeodomain 8", "refseq_ac": [ { "id": "NP_180366", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_180366", "type": "external" } ], "gene_names_uniprotkb": "BLH8; BEL1-like homeodomain 8; PNF; POUND-FOOLISH; T1E2.9; T1E2_9", "gene_names_refseq": "BEL1-like homeodomain 8; BLH8; PNF; POUND-FOOLISH; T1E2.9; T1E2_9", "protein_names_uniprotkb": "BEL1-like homeodomain protein 8; BEL1-like protein 8; Protein POUND-FOOLISH", "protein_names_refseq": "BEL1-like homeodomain 8", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G27990)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "10617197;11910074;14593172;15120075;16741748;27862469", "class_list": "", "function": "Required for specifying floral primordia and establishing early internode patterning events during inflorescence development., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0003700 DNA-binding transcription factor activity;GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding;GO:0003677 DNA binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006357 regulation of transcription by RNA polymerase II;GO:0007389 pattern specification process;GO:0010076 maintenance of floral meristem identity;GO:0010077 maintenance of inflorescence meristem identity", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q9SJJ3-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q6AWX6-1", "uniprot_id": [ { "id": "SCAR1_ARATH", "url": "https://www.uniprot.org/uniprot/Q6AWX6", "type": "external" } ], "mass": 92090.0, "length": 821, "protein_name": "Protein SCAR1", "gene_name": "SCAR1; WAVE1", "organism": "Arabidopsis", "refseq_name": "SCAR family protein", "refseq_ac": [ { "id": "NP_001031474", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001031474", "type": "external" } ], "gene_names_uniprotkb": "SCAR1; WAVE1; ATRANGAP2; ATSCAR1; SCAR1; T14G11.27; T14G11_27", "gene_names_refseq": "ATRANGAP2; ATSCAR1; SCAR1; T14G11.27; T14G11_27; WAVE1; WISKOTT-ALDRICH SYNDROME PROTEIN FAMILY VERPROLIN HOMOLOGOUS PROTEIN 1", "protein_names_uniprotkb": "Protein SCAR1; AtSCAR1; Protein WAVE1", "protein_names_refseq": "SCAR family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G34150)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "10617197;14593172;15296761;15316111;15534215;17267444;20466843;25561503;27862469", "class_list": "", "function": "Involved in regulation of actin and microtubule organization. Part of a WAVE complex that activates the Arp2/3 complex. Regulates trichome branch positioning and expansion., [UniProtKB, PubMed, UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 11, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O22968;Q56WS5;Q5XPJ7;Q84WP7", "ec_number_list": [], "go_molecular_function": "GO:0003785 actin monomer binding;GO:0034237 protein kinase A regulatory subunit binding;GO:0071933 Arp2/3 complex binding;GO:0003779 actin binding", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005856 cytoskeleton;GO:0016020 membrane;GO:0031209 SCAR complex;GO:0071944 cell periphery", "go_biological_process": "GO:0030036 actin cytoskeleton organization;GO:2000601 positive regulation of Arp2/3 complex-mediated actin nucleation;GO:0051127 positive regulation of actin nucleation", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "Q6AWX6-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q67Y99-1", "uniprot_id": [ { "id": "CLPF_ARATH", "url": "https://www.uniprot.org/uniprot/Q67Y99", "type": "external" } ], "mass": 37440.0, "length": 330, "protein_name": "Clp protease adapter protein ClpF, chloroplastic", "gene_name": "CLPF", "organism": "Arabidopsis", "refseq_name": "uvrB/uvrC motif-containing protein", "refseq_ac": [ { "id": "NP_001189504", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001189504", "type": "external" } ], "gene_names_uniprotkb": "CLPF; T4M8.18; T4M8_18", "gene_names_refseq": "T4M8.18; T4M8_18", "protein_names_uniprotkb": "Clp protease adapter protein ClpF, chloroplastic", "protein_names_refseq": "uvrB/uvrC motif-containing protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G03390)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "10617197;14593172;18463617;20466843;23660473;25561503;26419670;27862469;30833711", "class_list": "", "function": "Clp protease adapter that facilitates CLPS1 recruitment to ClpC chaperones thus forming a binary adapter for selective substrate recognition and delivery to plastid Clp protease system (CLPC)., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q8L7K8;Q9ZQ75;Q9ZQ76", "ec_number_list": [], "go_molecular_function": "GO:0003677 DNA binding", "go_cellular_component": "GO:0005634 nucleus;GO:0009507 chloroplast;GO:0009840 chloroplastic endopeptidase Clp complex", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "Q67Y99-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9SJI9-1", "uniprot_id": [ { "id": "PCO4_ARATH", "url": "https://www.uniprot.org/uniprot/Q9SJI9", "type": "external" } ], "mass": 27183.0, "length": 241, "protein_name": "Plant cysteine oxidase 4", "gene_name": "PCO4", "organism": "Arabidopsis", "refseq_name": "2-aminoethanethiol dioxygenase, putative (DUF1637)", "refseq_ac": [ { "id": "NP_001078042", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001078042", "type": "external" } ], "gene_names_uniprotkb": "PCO4; F14N22.6; F14N22_6; plant cysteine oxidase 4", "gene_names_refseq": "F14N22.6; F14N22_6; PCO4; plant cysteine oxidase 4", "protein_names_uniprotkb": "Plant cysteine oxidase 4; 1.13.11.20; AtPCO4", "protein_names_refseq": "2-aminoethanethiol dioxygenase, putative (DUF1637)", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G42670)", "pathway_count": 1, "publication_count": 14, "publication_id_list": "10617197;18463617;20466843;21768351;23660473;24599061;25561503;27862469;28011693;28332493;29848548;30833711;32868422;33207269", "class_list": "", "function": "Catalyzes the oxidation of N-terminal cysteine residues (N-Cys), thus preparing the protein for N-end rule pathway-mediated proteasomal degradation, upstream of the N-end rule enzymes ATE1, ATE2 and PRT6 (Probable) (PubMed:28332493, PubMed:29848548, PubMed:32868422, PubMed:33207269). Controls the preparation of the group VII ethylene response factor (ERF-VII) proteins for degradation via the 26S proteasome N-end rule pathway (Probable) (PubMed:28332493, PubMed:29848548, PubMed:32868422, PubMed:33207269). Acts as an oxygen sensor that controls the stability of ERF-VII proteins, which are stabilized in flooding-induced hypoxia, and regulate transcriptional adaptation to these adverse conditions (PubMed:28332493, PubMed:29848548)., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 5, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q0WUD4", "ec_number_list": [ { "id": "1.13.11.20", "url": "https://www.rhea-db.org/rhea/?query=ec:1.13.11.20", "type": "external" } ], "go_molecular_function": "GO:0005506 iron ion binding;GO:0017172 cysteine dioxygenase activity;GO:0046872 metal ion binding", "go_cellular_component": "GO:0005634 nucleus;GO:0009507 chloroplast", "go_biological_process": "GO:0018171 peptidyl-cysteine oxidation;GO:0071456 cellular response to hypoxia;GO:0070483 detection of hypoxia", "synthesized_glycan_count": 0, "hit_score": 1.5, "record_id": "Q9SJI9-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q42381-1", "uniprot_id": [ { "id": "HLS1_ARATH", "url": "https://www.uniprot.org/uniprot/Q42381", "type": "external" } ], "mass": 44934.0, "length": 403, "protein_name": "Probable N-acetyltransferase HLS1", "gene_name": "HLS1", "organism": "Arabidopsis", "refseq_name": "Acyl-CoA N-acyltransferases (NAT) superfamily protein", "refseq_ac": [ { "id": "NP_195474", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_195474", "type": "external" } ], "gene_names_uniprotkb": "HLS1; COP3; F19F18.70; F19F18_70; HOOKLESS 1; UNS2; UNUSUAL SUGAR RESPONSE 2", "gene_names_refseq": "CONSTITUTIVE PHOTOMORPHOGENIC 3; COP3; F19F18.70; F19F18_70; HLS1; HOOKLESS 1; UNS2; UNUSUAL SUGAR RESPONSE 2", "protein_names_uniprotkb": "Probable N-acetyltransferase HLS1; 2.3.1.-; Protein CONSTITUTIVE PHOTOMORPHOGENIC 3; Protein HOOKLESS 1; Protein UNUSUAL SUGAR RESPONSE 2", "protein_names_refseq": "Acyl-CoA N-acyltransferases (NAT) superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G37580)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "10409511;10617198;17071622;18838801;22349459;27862469;8612271", "class_list": "", "function": "Ethylene-responsive N-acetyltransferase required for differential cell elongation in the hypocotyl. Regulates apical hook formation of dark-grown seedlings. May control differential cell growth by regulating auxin activity. May be involved in negative feedback regulation of auxin homeostasis through the control of GH3-like genes. Modulates de novo shoot organogenesis., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 2, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0008080 N-acetyltransferase activity;GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0009826 unidimensional cell growth;GO:0009640 photomorphogenesis;GO:0009723 response to ethylene;GO:0009734 auxin-activated signaling pathway", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q42381-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q5IBC5-1", "uniprot_id": [ { "id": "ESP1_ARATH", "url": "https://www.uniprot.org/uniprot/Q5IBC5", "type": "external" } ], "mass": 244847.0, "length": 2180, "protein_name": "Separase", "gene_name": "ESP1; ESP", "organism": "Arabidopsis", "refseq_name": "separase", "refseq_ac": [ { "id": "NP_001190804", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001190804", "type": "external" } ], "gene_names_uniprotkb": "ESP1; ESP; AESP; ESP; EXTRA SPINDLE POLES; F7H19.150; F7H19_150; RADIALLY SWOLLEN 4; RSW4; SEPARASE; homolog of separase", "gene_names_refseq": "AESP; ESP; EXTRA SPINDLE POLES; F7H19.150; F7H19_150; RADIALLY SWOLLEN 4; RSW4; SEPARASE; homolog of separase", "protein_names_uniprotkb": "Separase; 3.4.22.49; AtESP; Protein EXTRA SPINDLE POLES; Protein RADIALLY SWOLLEN 4", "protein_names_refseq": "separase", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G22970)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "10617198;16582011;19592426;20150278;21559383;27862469", "class_list": "", "function": "Cleaves SYN1, releasing sister chromatid cohesion. Required for the release of cohesin at anaphase I and anaphase II, whereas the release of cohesin during diplotene and diakinesis occurs in a separase-independent process. Essential for embryo and endosperm development. May play a role in centromeric heterochromatin structure/formation during early meiosis, non-homologous centromere association and radial microtubule system (RMS) formation. May regulate the mitosis-specific cyclin CYCB1-1., [UniProtKB, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 3, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "F4JMQ3;O82745", "ec_number_list": [], "go_molecular_function": "GO:0008233 peptidase activity;GO:0004197 cysteine-type endopeptidase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005874 microtubule;GO:0072686 mitotic spindle", "go_biological_process": "GO:0051307 meiotic chromosome separation;GO:0006508 proteolysis;GO:0016192 vesicle-mediated transport;GO:0006887 exocytosis;GO:0051304 chromosome separation", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q5IBC5-1", "record_type": "protein", "filter_code": "0000000.0000101.010000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q94A06-1", "uniprot_id": [ { "id": "M2K1_ARATH", "url": "https://www.uniprot.org/uniprot/Q94A06", "type": "external" } ], "mass": 39210.0, "length": 354, "protein_name": "Mitogen-activated protein kinase kinase 1", "gene_name": "MEK1; MKK1", "organism": "Arabidopsis", "refseq_name": "MAP kinase/ ERK kinase 1", "refseq_ac": [ { "id": "NP_194337", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_194337", "type": "external" } ], "gene_names_uniprotkb": "MEK1; MKK1; ATMEK1; ERK kinase 1; F20B18.180; F20B18_180; MEK1; MKK1; NMAPKK", "gene_names_refseq": "ATMEK1; F20B18.180; F20B18_180; MAP kinase/ ERK kinase 1; MEK1; MITOGEN ACTIVATED PROTEIN KINASE KINASE 1; MITOGEN ACTIVATED PROTEIN KINASE KINASE; MKK1; NMAPKK", "protein_names_uniprotkb": "Mitogen-activated protein kinase kinase 1; 2.7.12.2; AtMEK1; AtMKK1; MAP kinase kinase 1; NMAPKK", "protein_names_refseq": "MAP kinase/ ERK kinase 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G26070)", "pathway_count": 1, "publication_count": 33, "publication_id_list": "10617198;10759527;11874576;11875555;14593172;15225555;16211390;16537113;17059410;17728292;18248592;18599650;18982020;19253305;19484493;19513235;20571112;22438062;23111157;23172892;23572148;23776212;24601666;25561503;26091701;27419465;27862469;28011693;29167316;30833711;31844896;9426629;9878570", "class_list": "", "function": "MEKK1, MKK1/MKK2 and MPK4/MPK6 function in a signaling pathway that modulates the expression of genes responding to biotic and abiotic stresses and also plays an important role in pathogen defense by negatively regulating innate immunity. Activates by phosphorylation the downstream MPK4. Acts redundantly with MKK2. MKK1-MPK6 module mediates abscisic acid (ABA)-dependent CAT1 expression with H(2)O(2) production and response to drought and salt stress. MKK1-MPK6 module is also involved in sugar signaling during the process of seed germination., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 7, "reported_mutagensis": 6, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O04440;O04661", "ec_number_list": [ { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.3.2.27", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.2.27", "type": "external" }, { "id": "2.7.10.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.-", "type": "external" }, { "id": "3.1.4.46", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.4.46", "type": "external" }, { "id": "2.7.11.25", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.25", "type": "external" }, { "id": "2.7.10.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.2", "type": "external" }, { "id": "2.7.11.22", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.22", "type": "external" }, { "id": "2.7.10.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.1", "type": "external" }, { "id": "2.7.11.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.-", "type": "external" }, { "id": "2.7.11.24", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.24", "type": "external" }, { "id": "2.7.12.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.1", "type": "external" }, { "id": "2.7.11.23", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.23", "type": "external" }, { "id": "2.7.12.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.2", "type": "external" }, { "id": "2.7.-.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.-.-", "type": "external" }, { "id": "3.1.26.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.26.-", "type": "external" }, { "id": "3.1.3.16", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.16", "type": "external" }, { "id": "2.7.11.34", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.34", "type": "external" }, { "id": "4.6.1.2", "url": "https://www.rhea-db.org/rhea/?query=ec:4.6.1.2", "type": "external" } ], "go_molecular_function": "GO:0004674 protein serine/threonine kinase activity;GO:0004713 protein tyrosine kinase activity;GO:0005524 ATP binding;GO:0004708 MAP kinase kinase activity;GO:0106310 protein serine kinase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0009507 chloroplast", "go_biological_process": "GO:0098542 defense response to other organism;GO:0007165 signal transduction;GO:0045087 innate immune response;GO:0000165 MAPK cascade;GO:0042542 response to hydrogen peroxide", "synthesized_glycan_count": 0, "hit_score": 3.4, "record_id": "Q94A06-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9M0J5-1", "uniprot_id": [ { "id": "MYB41_ARATH", "url": "https://www.uniprot.org/uniprot/Q9M0J5", "type": "external" } ], "mass": 31652.0, "length": 282, "protein_name": "Transcription factor MYB41", "gene_name": "MYB41", "organism": "Arabidopsis", "refseq_name": "myb domain protein 41", "refseq_ac": [ { "id": "NP_194540", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_194540", "type": "external" } ], "gene_names_uniprotkb": "MYB41; AtMYB41; T13J8.220; T13J8_220; myb domain protein 41", "gene_names_refseq": "AtMYB41; MYB41; T13J8.220; T13J8_220; myb domain protein 41", "protein_names_uniprotkb": "Transcription factor MYB41; AtMYB41; Myb-related protein 41", "protein_names_refseq": "myb domain protein 41", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G28110)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "10617198;11597504;14593172;19211694;22575450;25060192;27862469;9839469", "class_list": "", "function": "Transcription factor involved in salt stress response. Confers tolerance to salt stress (PubMed:22575450). Involved in distinct cellular processes in response to osmotic stress, including control of primary metabolism and negative regulation of short-term transcriptional responses to osmotic stress (PubMed:19211694). Can activate the steps necessary for aliphatic suberin synthesis and deposition of cell wall-associated suberin-like lamellae. Involved in the production of aliphatic suberin under abiotic stress conditions (PubMed:25060192)., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9ZTE3", "ec_number_list": [], "go_molecular_function": "GO:0003700 DNA-binding transcription factor activity;GO:0000976 transcription cis-regulatory region binding;GO:0003677 DNA binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0009825 multidimensional cell growth;GO:0006351 DNA-templated transcription;GO:0045892 negative regulation of DNA-templated transcription;GO:1902074 response to salt;GO:0080090 regulation of primary metabolic process", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "Q9M0J5-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q681I0-1", "uniprot_id": [ { "id": "ORTHL_ARATH", "url": "https://www.uniprot.org/uniprot/Q681I0", "type": "external" } ], "mass": 52308.0, "length": 465, "protein_name": "E3 ubiquitin-protein ligase ORTHRUS-LIKE 1", "gene_name": "ORTHL", "organism": "Arabidopsis", "refseq_name": "ORTHRUS-like protein", "refseq_ac": [ { "id": "NP_001078357", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001078357", "type": "external" } ], "gene_names_uniprotkb": "ORTHL; 15935; ORL1; ORTH-LIKE 1; ORTHRUS-LIKE 1; ORTHRUS-like; T15F16.7; T3F12.10; VARIANT IN METHYLATION 6; VIM6", "gene_names_refseq": "15935; ORL1; ORTH-LIKE 1; ORTHL; ORTHRUS-LIKE 1; ORTHRUS-like; T3F12.10; VARIANT IN METHYLATION 6; VIM6", "protein_names_uniprotkb": "E3 ubiquitin-protein ligase ORTHRUS-LIKE 1; 2.3.2.27; ORTH-LIKE 1; Protein VARIANT IN METHYLATION 6; RING-type E3 ubiquitin transferase ORTHRUS-LIKE 1", "protein_names_refseq": "ORTHRUS-like protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G08590)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "10617198;11983057;15208421;18643997;27532006;27862469", "class_list": "", "function": "E3 ubiquitin-protein ligase. May participate in methylation-dependent transcriptional regulation. Mediates ubiquitination with the E2 ubiquitin-conjugating enzyme UBC11., [UniProtKB, PubMed]; Multi domain E3 ubiquitin ligase that also plays a role in DNA methylation and histone modifications., [UniProtKB, UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "O22280;O81463;Q500W6;Q709F3", "ec_number_list": [], "go_molecular_function": "GO:0008270 zinc ion binding;GO:0061630 ubiquitin protein ligase activity;GO:0008327 methyl-CpG binding;GO:0042393 histone binding;GO:0004842 ubiquitin-protein transferase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0016020 membrane", "go_biological_process": "GO:0016567 protein ubiquitination;GO:0044027 negative regulation of gene expression via chromosomal CpG island methylation;GO:0006325 chromatin organization", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q681I0-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000001001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q43315-1", "uniprot_id": [ { "id": "FPPS2_ARATH", "url": "https://www.uniprot.org/uniprot/Q43315", "type": "external" } ], "mass": 39826.0, "length": 342, "protein_name": "Farnesyl pyrophosphate synthase 2", "gene_name": "FPS2", "organism": "Arabidopsis", "refseq_name": "farnesyl diphosphate synthase 2", "refseq_ac": [ { "id": "NP_193452", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_193452", "type": "external" } ], "gene_names_uniprotkb": "FPS2; DL4630C; FCAALL.91; dl4630c", "gene_names_refseq": "DL4630C; FARNESYL DIPHOSPHATE SYNTHASE 2; FCAALL.91; FPS2; farnesyl diphosphate synthase 2", "protein_names_uniprotkb": "Farnesyl pyrophosphate synthase 2; (2E,6E)-farnesyl diphosphate synthase 2; 2.5.1.10; 2.5.1.1; Dimethylallyltranstransferase 2; FPP synthase 2; FPS 2; Farnesyl diphosphate synthase 2; Geranyltranstransferase 2", "protein_names_refseq": "farnesyl diphosphate synthase 2", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G17190)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "10617198;14593172;22060019;27862469;8631820;9461215", "class_list": "", "function": "Catalyzes the sequential condensation of isopentenyl pyrophosphate with the allylic pyrophosphates, dimethylallyl pyrophosphate, and then with the resultant geranylpyrophosphate to the ultimate product farnesyl pyrophosphate., [UniProtKB, UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [ { "id": "2.5.1.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.5.1.1", "type": "external" }, { "id": "2.5.1.10", "url": "https://www.rhea-db.org/rhea/?query=ec:2.5.1.10", "type": "external" }, { "id": "2.5.1.29", "url": "https://www.rhea-db.org/rhea/?query=ec:2.5.1.29", "type": "external" }, { "id": "2.5.1.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.5.1.-", "type": "external" } ], "go_molecular_function": "GO:0004161 dimethylallyltranstransferase activity;GO:0004337 (2E,6E)-farnesyl diphosphate synthase activity;GO:0046872 metal ion binding;GO:0004659 prenyltransferase activity", "go_cellular_component": "GO:0005737 cytoplasm", "go_biological_process": "GO:0033384 geranyl diphosphate biosynthetic process;GO:0045337 farnesyl diphosphate biosynthetic process;GO:0006695 cholesterol biosynthetic process;GO:0008299 isoprenoid biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q43315-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8LDM2-1", "uniprot_id": [ { "id": "PKSB_ARATH", "url": "https://www.uniprot.org/uniprot/Q8LDM2", "type": "external" } ], "mass": 42982.0, "length": 392, "protein_name": "Type III polyketide synthase B", "gene_name": "LAP5; PKSB", "organism": "Arabidopsis", "refseq_name": "Chalcone and stilbene synthase family protein", "refseq_ac": [ { "id": "NP_567971", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_567971", "type": "external" } ], "gene_names_uniprotkb": "LAP5; PKSB; F11I11.90; F11I11_90; LAP5; LESS ADHESIVE POLLEN 5; PSKB; T11I11.90; polyketide synthase B", "gene_names_refseq": "F11I11.90; F11I11_90; LAP5; LESS ADHESIVE POLLEN 5; PSKB; polyketide synthase B", "protein_names_uniprotkb": "Type III polyketide synthase B; 2.3.1.-; Hydroxyalkyl alpha-pyrone synthase PKS-B; PKS-B; Protein LESS ADHESIVE POLLEN 5", "protein_names_refseq": "Chalcone and stilbene synthase family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G34850)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "10617198;17147637;17611127;19043200;20442277;21193570;23632852;27862469", "class_list": "", "function": "Plant type III polyketide synthases (PKSs) that catalyzes the condensation of malonyl-CoA units with various CoA ester starter molecules to generate a diverse array of natural products including long-chain alkyl alpha-pyrones. Accepts up to C(20) chain-length fatty acyl CoAs as starter substrates, and carries out sequential condensations with malonyl-CoA to produce triketide and tetraketide alpha-pyrones, potential sporopollenin precursors (PubMed:19043200, PubMed:21193570). Favorite substrates for are midchain- and v-hydroxylated fatty acyl-CoAs (e.g. 12-hydroxyoctadecanoyl-CoA and 16-hydroxyhexadecanoyl-CoA). Required for pollen development and sporopollenin biosynthesis, the major constituent of exine in the outer pollen wall (PubMed:20442277, PubMed:21193570). In vitro, can use 4-coumaroyl-coenzyme A as substrate to produce bis-noryangonin and fatty acyl-coenzyme A as substrate to produce medium-chain alkyl pyrones. May play a role in both the synthesis of pollen fatty acids and phenolics found in exine (PubMed:20442277)., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0MFB8;Q9SW49", "ec_number_list": [], "go_molecular_function": "GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups;GO:0090439 tetraketide alpha-pyrone synthase activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005783 endoplasmic reticulum", "go_biological_process": "GO:0009813 flavonoid biosynthetic process;GO:0030639 polyketide biosynthetic process;GO:0010584 pollen exine formation;GO:0080110 sporopollenin biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "Q8LDM2-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q7Y1C5-1", "uniprot_id": [ { "id": "BRC2A_ARATH", "url": "https://www.uniprot.org/uniprot/Q7Y1C5", "type": "external" } ], "mass": 126652.0, "length": 1151, "protein_name": "Protein BREAST CANCER SUSCEPTIBILITY 2 homolog A", "gene_name": "BRCA2(IV); BRCA2A", "organism": "Arabidopsis", "refseq_name": "BREAST CANCER 2 like 2A", "refseq_ac": [ { "id": "NP_191913", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_191913", "type": "external" } ], "gene_names_uniprotkb": "BRCA2(IV); BRCA2A; BRCA2A; BRCA5(IV); BREAST CANCER 2 like 2A; EDA20; F6N15.14; F6N15.15; F6N15_14; MEE43", "gene_names_refseq": "BRCA2(IV); BRCA2A; BREAST CANCER 2 like 2A; EDA20; EMBRYO SAC DEVELOPMENT ARREST 20; F6N15.14; F6N15_14; MATERNAL EFFECT EMBRYO ARREST 43; MEE43", "protein_names_uniprotkb": "Protein BREAST CANCER SUSCEPTIBILITY 2 homolog A; AtBRCA2A", "protein_names_refseq": "BREAST CANCER 2 like 2A", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G00020)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "10617198;15014444;16415210;22039535;22077663;27862469", "class_list": "", "function": "Involved in double-strand break repair and/or homologous recombination by mediating RAD51- and DMC1-facilitated DNA repair. Plays an essential role in both somatic and meiotic homologous recombination. Is crucial for the formation of RAD51 and DMC1 foci during male meiotic homologous recombination in prophase I., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O81303;Q9M164", "ec_number_list": [], "go_molecular_function": "GO:0003697 single-stranded DNA binding;GO:0003677 DNA binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006355 regulation of DNA-templated transcription;GO:0000724 double-strand break repair via homologous recombination;GO:0051321 meiotic cell cycle;GO:0031347 regulation of defense response;GO:0009553 embryo sac development", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q7Y1C5-1", "record_type": "protein", "filter_code": "0000000.0000101.010000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9SDN0-1", "uniprot_id": [ { "id": "DNJ20_ARATH", "url": "https://www.uniprot.org/uniprot/Q9SDN0", "type": "external" } ], "mass": 23361.0, "length": 197, "protein_name": "Chaperone protein dnaJ 20, chloroplastic", "gene_name": "ATJ20; J20", "organism": "Arabidopsis", "refseq_name": "DNAJ-like 20", "refseq_ac": [ { "id": "NP_193119", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_193119", "type": "external" } ], "gene_names_uniprotkb": "ATJ20; J20; C20; DJC26; DNA J protein C26; DNAJ-like 20; F18A5.220; F18A5_220; J20", "gene_names_refseq": "DJC26; DNA J protein C26; DNAJ-like 20; F18A5.220; F18A5_220; J20", "protein_names_uniprotkb": "Chaperone protein dnaJ 20, chloroplastic; AtDjC20; AtJ20", "protein_names_refseq": "DNAJ-like 20", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G13830)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "10617198;11599562;14593172;15347791;27862469", "class_list": "", "function": "Plays a continuous role in plant development probably in the structural organization of compartments., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9SVN0", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005634 nucleus;GO:0009507 chloroplast", "go_biological_process": "GO:0006457 protein folding;GO:0010322 regulation of isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q9SDN0-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q6IDB0-1", "uniprot_id": [ { "id": "SPER3_ARATH", "url": "https://www.uniprot.org/uniprot/Q6IDB0", "type": "external" } ], "mass": 21409.0, "length": 193, "protein_name": "Protein SPEAR3", "gene_name": "SPEAR3; TIE1", "organism": "Arabidopsis", "refseq_name": "mediator of RNA polymerase II transcription subunit", "refseq_ac": [ { "id": "NP_194613", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_194613", "type": "external" } ], "gene_names_uniprotkb": "SPEAR3; TIE1; F16A16.50; F16A16_50; TIE1", "gene_names_refseq": "F16A16.50; F16A16_50; TCP Interactor containing EAR motif protein 1; TIE1", "protein_names_uniprotkb": "Protein SPEAR3; SPL-like, EAR-containing protein 3; TCP interactor containing EAR motif protein 1", "protein_names_refseq": "mediator of RNA polymerase II transcription subunit", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G28840)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "10617198;23444332;25527103;27862469;29167316", "class_list": "", "function": "Transcriptional regulator of leaf development. Acts as an adapter-like transcriptional repressor recruiting TPL/TPR corepressors to inhibit the CIN-like TCP transcription factors (PubMed:23444332)., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 3, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9SVV1", "ec_number_list": [], "go_molecular_function": "GO:0003700 DNA-binding transcription factor activity", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0045892 negative regulation of DNA-templated transcription;GO:0048366 leaf development", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q6IDB0-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9T6H8-1", "uniprot_id": [ { "id": "CCMF1_ARATH", "url": "https://www.uniprot.org/uniprot/Q9T6H8", "type": "external" } ], "mass": 43647.0, "length": 382, "protein_name": "Cytochrome c biogenesis CcmF N-terminal-like mitochondrial protein 1", "gene_name": "CCB382; CCMFN1", "organism": "Arabidopsis", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "CCB382; CCMFN1; CC6BN1; CCB382", "gene_names_refseq": "", "protein_names_uniprotkb": "Cytochrome c biogenesis CcmF N-terminal-like mitochondrial protein 1; Cytochrome c biogenesis orf382", "protein_names_refseq": "", "tax_id": 3702, "disease": "", "pathway": "", "pathway_count": 0, "publication_count": 8, "publication_id_list": "10611383;10617197;10617198;17565941;18644794;27862469;29519893;8988169", "class_list": "", "function": "Forms a complex with CCMFC, CCMFN2 and CCMH that performs the assembly of heme with c-type apocytochromes in mitochondria., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A2P2CLH5;A7KNF5;O03601;Q1ZXZ2;Q31706", "ec_number_list": [], "go_molecular_function": "GO:0015232 heme transmembrane transporter activity;GO:0016491 oxidoreductase activity", "go_cellular_component": "GO:0005739 mitochondrion;GO:0005743 mitochondrial inner membrane", "go_biological_process": "GO:0017004 cytochrome complex assembly", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "Q9T6H8-1", "record_type": "protein", "filter_code": "0000000.0000100.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q6NPD7-1", "uniprot_id": [ { "id": "NUD10_ARATH", "url": "https://www.uniprot.org/uniprot/Q6NPD7", "type": "external" } ], "mass": 31816.0, "length": 277, "protein_name": "Nudix hydrolase 10", "gene_name": "NUDT10", "organism": "Arabidopsis", "refseq_name": "nudix hydrolase homolog 10", "refseq_ac": [ { "id": "NP_001031713", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001031713", "type": "external" } ], "gene_names_uniprotkb": "NUDT10; ATNUDT10; NUDX10; T30C3.4; nudix hydrolase homolog 10", "gene_names_refseq": "ATNUDT10; NUDT10; nudix hydrolase homolog 10", "protein_names_uniprotkb": "Nudix hydrolase 10; 3.6.1.-; 3.6.1.13; 3.6.1.22; ADP-ribose pyrophosphatase; AtNUDT10; NADH pyrophosphatase", "protein_names_refseq": "nudix hydrolase homolog 10", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G25434)", "pathway_count": 1, "publication_count": 3, "publication_id_list": "10617198;15878881;27862469", "class_list": "", "function": "May mediate the hydrolysis of some nucleoside diphosphate derivatives. In vitro, uses both ADP-ribose and NADH as substrates; however the relevance of such substrates in vivo is unclear., [UniProtKB, PubMed]; Mediates the hydrolysis of some nucleoside diphosphate derivatives, possibly using both NADH and ADP-ribose as substrates., [UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O65616;Q2V3F2", "ec_number_list": [ { "id": "3.6.1.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.1.-", "type": "external" }, { "id": "3.6.1.13", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.1.13", "type": "external" }, { "id": "3.6.1.18", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.1.18", "type": "external" }, { "id": "3.6.1.22", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.1.22", "type": "external" }, { "id": "3.6.1.55", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.1.55", "type": "external" }, { "id": "3.6.1.67", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.1.67", "type": "external" }, { "id": "3.6.1.16", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.1.16", "type": "external" }, { "id": "3.6.1.53", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.1.53", "type": "external" }, { "id": "3.6.1.21", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.1.21", "type": "external" } ], "go_molecular_function": "GO:0000210 NAD+ diphosphatase activity;GO:0046872 metal ion binding;GO:0047631 ADP-ribose diphosphatase activity;GO:0051287 NAD binding;GO:0035529 NADH pyrophosphatase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005829 cytosol;GO:0009507 chloroplast", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "Q6NPD7-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8GYD2-1", "uniprot_id": [ { "id": "MND1_ARATH", "url": "https://www.uniprot.org/uniprot/Q8GYD2", "type": "external" } ], "mass": 26403.0, "length": 230, "protein_name": "Meiotic nuclear division protein 1 homolog", "gene_name": "ATMND1; MND1", "organism": "Arabidopsis", "refseq_name": "Mnd1 family protein", "refseq_ac": [ { "id": "NP_001078469", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001078469", "type": "external" } ], "gene_names_uniprotkb": "ATMND1; MND1; F19B15.200; F19B15_200", "gene_names_refseq": "ATMND1; F19B15.200; F19B15_200", "protein_names_uniprotkb": "Meiotic nuclear division protein 1 homolog; AtMND1; Meiotic nuclear division 1-like protein", "protein_names_refseq": "Mnd1 family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G29170)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "10617198;11910074;14593172;16442857;16763194;16872528;17937504;19187040;22060019;27862469", "class_list": "", "function": "Required for proper homologous chromosome pairing and efficient cross-over and intragenic recombination during meiosis. Stimulates both DMC1/LIM15- and RAD51-mediated homologous strand assimilation, which is required for the resolution of meiotic double-strand breaks., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A8MS27;Q9SZE5", "ec_number_list": [], "go_molecular_function": "GO:0003690 double-stranded DNA binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005730 nucleolus", "go_biological_process": "GO:0006302 double-strand break repair;GO:0010212 response to ionizing radiation;GO:0007131 reciprocal meiotic recombination;GO:0009553 embryo sac development;GO:0009555 pollen development", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "Q8GYD2-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9C5T4-1", "uniprot_id": [ { "id": "WRK18_ARATH", "url": "https://www.uniprot.org/uniprot/Q9C5T4", "type": "external" } ], "mass": 34766.0, "length": 310, "protein_name": "WRKY transcription factor 18", "gene_name": "WRKY18", "organism": "Arabidopsis", "refseq_name": "WRKY DNA-binding protein 18", "refseq_ac": [ { "id": "NP_567882", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_567882", "type": "external" } ], "gene_names_uniprotkb": "WRKY18; ATWRKY18; F11C18.16; F28M20.10; WRKY DNA-binding protein 18", "gene_names_refseq": "ARABIDOPSIS THALIANA WRKY DNA-BINDING PROTEIN 18; ATWRKY18; F11C18.16; WRKY DNA-binding protein 18; WRKY18", "protein_names_uniprotkb": "WRKY transcription factor 18; AtWRKY18; WRKY DNA-binding protein 18", "protein_names_refseq": "WRKY DNA-binding protein 18", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G31800)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "10617198;11449049;12068113;14593172;18463617;20466843;23572148;25561503;27862469;30833711", "class_list": "", "function": "Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element. Positively modulates defense-related gene expression and disease resistance., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O81768;Q944H8", "ec_number_list": [], "go_molecular_function": "GO:0003700 DNA-binding transcription factor activity;GO:0042802 identical protein binding;GO:0043565 sequence-specific DNA binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0042742 defense response to bacterium;GO:0050832 defense response to fungus;GO:0002237 response to molecule of bacterial origin;GO:0009751 response to salicylic acid", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "Q9C5T4-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q681K7-1", "uniprot_id": [ { "id": "GEX1_ARATH", "url": "https://www.uniprot.org/uniprot/Q681K7", "type": "external" } ], "mass": 67963.0, "length": 593, "protein_name": "Protein GAMETE EXPRESSED 1", "gene_name": "GEX1", "organism": "Arabidopsis", "refseq_name": "gamete expressed protein 1", "refseq_ac": [ { "id": "NP_001318802", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001318802", "type": "external" } ], "gene_names_uniprotkb": "GEX1; ATGEX1; GAMETE EXPRESSED PROTEIN 1; MTE17.20; MTE17_20; gamete expressed protein 1", "gene_names_refseq": "ATGEX1; GAMETE EXPRESSED PROTEIN 1; GEX1; MTE17.20; MTE17_20; gamete expressed protein 1", "protein_names_uniprotkb": "Protein GAMETE EXPRESSED 1", "protein_names_refseq": "gamete expressed protein 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G55490)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "11130714;16055690;21831199;27862469;9872454", "class_list": "", "function": "Has a dual function during gametophyte development and early embryogenesis. Required for correct pollen maturation., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q49L63;Q9FJ61", "ec_number_list": [], "go_molecular_function": "GO:0042802 identical protein binding", "go_cellular_component": "GO:0005886 plasma membrane;GO:0009507 chloroplast", "go_biological_process": "GO:0009553 embryo sac development;GO:0009555 pollen development;GO:0009793 embryo development ending in seed dormancy", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q681K7-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9SPU7-1", "uniprot_id": [ { "id": "TERT_ARATH", "url": "https://www.uniprot.org/uniprot/Q9SPU7", "type": "external" } ], "mass": 130580.0, "length": 1123, "protein_name": "Telomerase reverse transcriptase", "gene_name": "TERT", "organism": "Arabidopsis", "refseq_name": "telomerase reverse transcriptase", "refseq_ac": [ { "id": "NP_197187", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_197187", "type": "external" } ], "gene_names_uniprotkb": "TERT; ATTERT; F5E19.190; F5E19_190", "gene_names_refseq": "ATTERT; F5E19.190; F5E19_190; TERT; telomerase reverse transcriptase", "protein_names_uniprotkb": "Telomerase reverse transcriptase; 2.7.7.49; AtTERT", "protein_names_refseq": "telomerase reverse transcriptase", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G16850)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "10471830;10611295;11130714;11359612;14579127;17448460;17911168;18212040;18239859;27862469", "class_list": "", "function": "Telomerase is a ribonucleoprotein enzyme essential for the replication of chromosome termini in most eukaryotes. It elongates telomeres. It is a reverse transcriptase that adds simple sequence repeats to chromosome ends by copying a template sequence within the RNA component of the enzyme. Required to prevent genome instability induced by breakage-fusion-bridge (BFB) cycles. Can extend completely non-telomeric sequences using RNA template in vitro., [UniProtKB, PubMed, PubMed, PubMed, PubMed, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9SE99", "ec_number_list": [ { "id": "2.7.7.7", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.7.7", "type": "external" }, { "id": "2.7.7.102", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.7.102", "type": "external" }, { "id": "2.7.7.49", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.7.49", "type": "external" }, { "id": "3.4.23.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.4.23.-", "type": "external" }, { "id": "4.2.99.-", "url": "https://www.rhea-db.org/rhea/?query=ec:4.2.99.-", "type": "external" } ], "go_molecular_function": "GO:0046872 metal ion binding;GO:0042162 telomeric DNA binding;GO:0003720 telomerase activity;GO:0070034 telomerase RNA binding;GO:0003677 DNA binding", "go_cellular_component": "GO:0005634 nucleus;GO:0000781 chromosome, telomeric region;GO:0000333 telomerase catalytic core complex", "go_biological_process": "GO:0000723 telomere maintenance;GO:0019827 stem cell population maintenance;GO:0007004 telomere maintenance via telomerase;GO:0010073 meristem maintenance;GO:0010449 root meristem growth", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "Q9SPU7-1", "record_type": "protein", "filter_code": "0000000.0000101.010000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q5M755-1", "uniprot_id": [ { "id": "PAP7_ARATH", "url": "https://www.uniprot.org/uniprot/Q5M755", "type": "external" } ], "mass": 30531.0, "length": 273, "protein_name": "Fibrillin-5, chloroplastic", "gene_name": "FBN5", "organism": "Arabidopsis", "refseq_name": "Plastid-lipid associated protein PAP / fibrillin family protein", "refseq_ac": [ { "id": "NP_001031862", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001031862", "type": "external" } ], "gene_names_uniprotkb": "FBN5; FIB5; MYH9.3; MYH9_3; PAP7", "gene_names_refseq": "MYH9.3; MYH9_3", "protein_names_uniprotkb": "Fibrillin-5, chloroplastic; Plastid-lipid-associated protein 7", "protein_names_refseq": "Plastid-lipid associated protein PAP / fibrillin family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G09820)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "10048488;11130714;21571574;22274653;26432861;27862469;28751900;29741733", "class_list": "", "function": "Essential for plastoquinone-9 (PQ-9) biosynthesis (PubMed:26432861, PubMed:29741733). Interacts with the diphosphate synthases SPS1 and SPS2, and binds to the hydrophobic solanesyl moiety, which is generated by SPS1 and SPS2, in FBN5-SPS homodimeric complexes to stimulate the enzyme activity of SPS1 and SPS2 (PubMed:26432861)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "F4KFC4;Q9FIC4", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0009507 chloroplast;GO:0009570 chloroplast stroma", "go_biological_process": "GO:0010236 plastoquinone biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "Q5M755-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q6J9N8-1", "uniprot_id": [ { "id": "AIL7_ARATH", "url": "https://www.uniprot.org/uniprot/Q6J9N8", "type": "external" } ], "mass": 55448.0, "length": 498, "protein_name": "AP2-like ethylene-responsive transcription factor AIL7", "gene_name": "AIL7", "organism": "Arabidopsis", "refseq_name": "AINTEGUMENTA-like 7", "refseq_ac": [ { "id": "NP_001318882", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001318882", "type": "external" } ], "gene_names_uniprotkb": "AIL7; AINTEGUMENTA-like 7; K21L13.1; K21L13_1; PLETHORA 7; PLT7", "gene_names_refseq": "AIL7; AINTEGUMENTA-like 7; K21L13.1; K21L13_1; PLETHORA 7; PLT7", "protein_names_uniprotkb": "AP2-like ethylene-responsive transcription factor AIL7; Protein AINTEGUMENTA-LIKE 7; Protein PLETHORA 7", "protein_names_refseq": "AINTEGUMENTA-like 7", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G65510)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "11130714;15988559;16407444;25564655;27862469", "class_list": "", "function": "Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9LSM4", "ec_number_list": [], "go_molecular_function": "GO:0003677 DNA binding;GO:0003700 DNA-binding transcription factor activity", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0009873 ethylene-activated signaling pathway;GO:0010311 lateral root formation;GO:0010492 maintenance of shoot apical meristem identity;GO:1990110 callus formation", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q6J9N8-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q84K25-1", "uniprot_id": [ { "id": "COG8_ARATH", "url": "https://www.uniprot.org/uniprot/Q84K25", "type": "external" } ], "mass": 63052.0, "length": 569, "protein_name": "Conserved oligomeric Golgi complex subunit 8", "gene_name": "COG8", "organism": "Arabidopsis", "refseq_name": "conserved oligomeric Golgi complex component-related / COG complex component-like protein", "refseq_ac": [ { "id": "NP_568256", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_568256", "type": "external" } ], "gene_names_uniprotkb": "COG8; F14F18.150; F14F18_150", "gene_names_refseq": "F14F18.150; F14F18_150", "protein_names_uniprotkb": "Conserved oligomeric Golgi complex subunit 8; COG complex subunit 8; Component of oligomeric Golgi complex 8", "protein_names_refseq": "conserved oligomeric Golgi complex component-related / COG complex component-like protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G11980)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "11130714;14593172;23111157;25561503;27448097;27862469;30833711", "class_list": "", "function": "Acts as a component of the peripheral membrane COG complex that is involved in intra-Golgi protein trafficking (PubMed:27448097). Involved in pollen tube growth by modulating Golgi morphology and vesicle trafficking homeostasis leading to the deposition of cell wall components and proteins at the pollen tube tip (PubMed:27448097). Required for sporophytic development (PubMed:27448097)., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q8LCN9;Q9LYH5", "ec_number_list": [], "go_molecular_function": "GO:0042803 protein homodimerization activity", "go_cellular_component": "GO:0000139 Golgi membrane;GO:0005794 Golgi apparatus;GO:0017119 Golgi transport complex;GO:0009506 plasmodesma", "go_biological_process": "GO:0015031 protein transport;GO:0007030 Golgi organization;GO:0048193 Golgi vesicle transport;GO:0006891 intra-Golgi vesicle-mediated transport;GO:0009860 pollen tube growth", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q84K25-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q94FL9-1", "uniprot_id": [ { "id": "MB3R4_ARATH", "url": "https://www.uniprot.org/uniprot/Q94FL9", "type": "external" } ], "mass": 108236.0, "length": 961, "protein_name": "Transcription factor MYB3R-4", "gene_name": "MYB3R-4; MYB3R4", "organism": "Arabidopsis", "refseq_name": "myb domain protein 3r-4", "refseq_ac": [ { "id": "NP_001330337", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001330337", "type": "external" } ], "gene_names_uniprotkb": "MYB3R-4; MYB3R4; AtMYB3R4; EDC; F15N18.100; F15N18_100; myb domain protein 3R4; myb domain protein 3r-4", "gene_names_refseq": "AtMYB3R4; F15N18.100; F15N18_100; MYB3R-4; myb domain protein 3R4; myb domain protein 3r-4", "protein_names_uniprotkb": "Transcription factor MYB3R-4; Myb-related protein 3R-4; Protein ENHANCED DEFECTIVE CYTOKINESIS", "protein_names_refseq": "myb domain protein 3r-4", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G11510)", "pathway_count": 1, "publication_count": 12, "publication_id_list": "11130714;11597504;15937229;16463103;17287251;20018666;20466843;21862669;22060019;25806785;26069325;27862469", "class_list": "", "function": "Involved in transcription regulation during induced endoreduplication at the powdery mildew (e.g. G.orontii) infection site, thus promoting G.orontii growth and reproduction., [UniProtKB, PubMed]; Transcription factor that binds 5'-AACGG-3' motifs in gene promoters (PubMed:21862669). Involved in the regulation of cytokinesis, probably via the activation of several G2/M phase-specific genes transcription (e.g. KNOLLE) (PubMed:17287251, PubMed:21862669, PubMed:25806785). Required for the maintenance of diploidy (PubMed:21862669)., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "Q56WW6;Q9LYE0", "ec_number_list": [], "go_molecular_function": "GO:0003700 DNA-binding transcription factor activity;GO:0000976 transcription cis-regulatory region binding;GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding;GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific;GO:0043565 sequence-specific DNA binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005819 spindle;GO:0009524 phragmoplast", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006355 regulation of DNA-templated transcription;GO:0045893 positive regulation of DNA-templated transcription;GO:0009620 response to fungus;GO:0050832 defense response to fungus", "synthesized_glycan_count": 0, "hit_score": 1.3, "record_id": "Q94FL9-1", "record_type": "protein", "filter_code": "0000000.0000101.010000.100000000000000000.0000000001001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q84VQ1-1", "uniprot_id": [ { "id": "KINB1_ARATH", "url": "https://www.uniprot.org/uniprot/Q84VQ1", "type": "external" } ], "mass": 30724.0, "length": 283, "protein_name": "SNF1-related protein kinase regulatory subunit beta-1", "gene_name": "AKINBETA1; KINB1", "organism": "Arabidopsis", "refseq_name": "5'-AMP-activated protein kinase beta-2 subunit protein", "refseq_ac": [ { "id": "NP_197615", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_197615", "type": "external" } ], "gene_names_uniprotkb": "AKINBETA1; KINB1; KINbeta1; T10F18.200; T10F18_200", "gene_names_refseq": "AKINBETA1; KINbeta1; T10F18.200; T10F18_200", "protein_names_uniprotkb": "SNF1-related protein kinase regulatory subunit beta-1; AKIN subunit beta-1; AKINB1; AKINbeta1", "protein_names_refseq": "5'-AMP-activated protein kinase beta-2 subunit protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G21170)", "pathway_count": 1, "publication_count": 19, "publication_id_list": "10417704;11130714;11252725;17028154;17166759;17827350;19376835;23111157;23437128;23572148;23660473;25561503;25736509;26662259;27812990;27862469;29654922;29945970;30833711", "class_list": "", "function": "Regulatory subunit of the probable trimeric SNF1-related protein kinase (SnRK) complex, which may play a role in a signal transduction cascade regulating gene expression and carbohydrate metabolism in higher plants. The SnRK complex may also be involved in the regulation of fatty acid synthesis by phosphorylation of acetyl-CoA carboxylase and in assimilation of nitrogen by phosphorylating nitrate reductase., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 10, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9SCY6", "ec_number_list": [], "go_molecular_function": "GO:0005524 ATP binding;GO:0019887 protein kinase regulator activity;GO:1901982 maltose binding;GO:0016301 kinase activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005886 plasma membrane;GO:0031588 nucleotide-activated protein kinase complex;GO:0009507 chloroplast", "go_biological_process": "GO:0006633 fatty acid biosynthetic process;GO:0042128 nitrate assimilation;GO:0043562 cellular response to nitrogen levels", "synthesized_glycan_count": 0, "hit_score": 2.0, "record_id": "Q84VQ1-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9FYE6-1", "uniprot_id": [ { "id": "BH101_ARATH", "url": "https://www.uniprot.org/uniprot/Q9FYE6", "type": "external" } ], "mass": 27717.0, "length": 240, "protein_name": "Transcription factor bHLH101", "gene_name": "BHLH101", "organism": "Arabidopsis", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "BHLH101; EN10; F21E1.70; F21E1_70", "gene_names_refseq": "", "protein_names_uniprotkb": "Transcription factor bHLH101; AtbHLH101; Basic helix-loop-helix protein 101; Transcription factor EN 10; bHLH 101; bHLH transcription factor bHLH101", "protein_names_refseq": "", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G04150)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "11130714;12679534;12897250;14600211;17147637;17516080;27862469", "class_list": "", "function": "", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0MFD6", "ec_number_list": [], "go_molecular_function": "GO:0003700 DNA-binding transcription factor activity;GO:0046983 protein dimerization activity;GO:0000977 RNA polymerase II transcription regulatory region sequence-specific DNA binding;GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific;GO:0003677 DNA binding", "go_cellular_component": "GO:0005634 nucleus;GO:0090575 RNA polymerase II transcription regulator complex", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006357 regulation of transcription by RNA polymerase II;GO:0006355 regulation of DNA-templated transcription;GO:0060586 multicellular organismal-level iron ion homeostasis;GO:0010106 cellular response to iron ion starvation", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q9FYE6-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9FMJ0-1", "uniprot_id": [ { "id": "P4KB1_ARATH", "url": "https://www.uniprot.org/uniprot/Q9FMJ0", "type": "external" } ], "mass": 126375.0, "length": 1121, "protein_name": "Phosphatidylinositol 4-kinase beta 1", "gene_name": "PI-4KBETA1; PI4KB1", "organism": "Arabidopsis", "refseq_name": "phosphatidylinositol 4-OH kinase beta1", "refseq_ac": [ { "id": "NP_201212", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_201212", "type": "external" } ], "gene_names_uniprotkb": "PI-4KBETA1; PI4KB1; MHJ24.5; MHJ24_5; PI4KBETA1; PI4K", "gene_names_refseq": "MHJ24.5; MHJ24_5; PHOSPHATIDYLINOSITOL 4-OH KINASE BETA1; PI-4KBETA1; PI4KBETA1; phosphatidylinositol 4-OH kinase beta1", "protein_names_uniprotkb": "Phosphatidylinositol 4-kinase beta 1; 2.7.1.67; AtPI4Kbeta1; PI-4Kbeta1; PI4-kinase beta 1; Phosphatidylinositol 4-OH kinase beta1; PtdIns-4-kinase beta 1", "protein_names_refseq": "phosphatidylinositol 4-OH kinase beta1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G64070)", "pathway_count": 1, "publication_count": 29, "publication_id_list": "10026194;11130714;12226484;12805633;14593172;16567499;16649109;18433157;18463617;18642946;19208902;19376835;20466843;20603382;21134079;21768351;22318862;22899063;23111157;23572148;23660473;23776212;25561503;26091701;27862469;29167316;29654922;30833711;9501997", "class_list": "", "function": "Acts on phosphatidylinositol (PtdIns) in the first committed step in the production of the second messenger inositol-1,4,5-trisphosphate. Necessary for proper organization of the trans-Golgi network (TGN) and post-Golgi secretion in root hairs. Together with PI4KB2, required during polarized root hair expansion and pollen tube elongation. Functions redundantly with PI4KB2 upstream of the cold response phosphoinositide-dependent phospholipase C (PI-PLC) pathway., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 5, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9ZPE1", "ec_number_list": [ { "id": "2.7.1.67", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.67", "type": "external" } ], "go_molecular_function": "GO:0031267 small GTPase binding;GO:0004430 1-phosphatidylinositol 4-kinase activity;GO:0043424 protein histidine kinase binding;GO:0016301 kinase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005794 Golgi apparatus;GO:0005886 plasma membrane;GO:0016020 membrane", "go_biological_process": "GO:0048015 phosphatidylinositol-mediated signaling;GO:0006661 phosphatidylinositol biosynthetic process;GO:0046854 phosphatidylinositol phosphate biosynthetic process;GO:0009860 pollen tube growth;GO:0048768 root hair cell tip growth", "synthesized_glycan_count": 0, "hit_score": 3.0, "record_id": "Q9FMJ0-1", "record_type": "protein", "filter_code": "0000000.0100101.010000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q6NKX1-1", "uniprot_id": [ { "id": "PROD2_ARATH", "url": "https://www.uniprot.org/uniprot/Q6NKX1", "type": "external" } ], "mass": 53074.0, "length": 476, "protein_name": "Proline dehydrogenase 2, mitochondrial", "gene_name": "PDH2; POX2", "organism": "Arabidopsis", "refseq_name": "Methylenetetrahydrofolate reductase family protein", "refseq_ac": [ { "id": "NP_198687", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_198687", "type": "external" } ], "gene_names_uniprotkb": "PDH2; POX2; MKD10.10; MKD10_10; PRODH2", "gene_names_refseq": "MKD10.10; MKD10_10", "protein_names_uniprotkb": "Proline dehydrogenase 2, mitochondrial; 1.5.5.2; Osmotic stress-induced proline dehydrogenase; Proline oxidase", "protein_names_refseq": "Methylenetetrahydrofolate reductase family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G38710)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "11130714;17106685;18088315;20403182;22060019;23111157;27862469;9679202", "class_list": "", "function": "Converts proline to delta-1-pyrroline-5-carboxylate., [UniProtKB, PubMed, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 5, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9FKR5", "ec_number_list": [ { "id": "1.5.5.2", "url": "https://www.rhea-db.org/rhea/?query=ec:1.5.5.2", "type": "external" } ], "go_molecular_function": "GO:0071949 FAD binding;GO:0004657 proline dehydrogenase activity", "go_cellular_component": "GO:0005739 mitochondrion", "go_biological_process": "GO:0006970 response to osmotic stress;GO:0009414 response to water deprivation;GO:0006562 L-proline catabolic process;GO:0010133 L-proline catabolic process to L-glutamate", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "Q6NKX1-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q6NLV4-1", "uniprot_id": [ { "id": "FY_ARATH", "url": "https://www.uniprot.org/uniprot/Q6NLV4", "type": "external" } ], "mass": 72242.0, "length": 647, "protein_name": "Flowering time control protein FY", "gene_name": "FY", "organism": "Arabidopsis", "refseq_name": "Transducin/WD40 repeat-like superfamily protein", "refseq_ac": [ { "id": "NP_196852", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_196852", "type": "external" } ], "gene_names_uniprotkb": "FY; T6I14.10; T6I14_10", "gene_names_refseq": "FY; T6I14.10; T6I14_10", "protein_names_uniprotkb": "Flowering time control protein FY", "protein_names_refseq": "Transducin/WD40 repeat-like superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G13480)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "11130714;12809608;16033802;19439664;19748916;27862469;28154133", "class_list": "", "function": "Plays a role in the regulation of flowering time in the autonomous flowering pathway by decreasing FLOWERING LOCUS C mRNA levels. Required for the negative autoregulation of FCA expression. Acts probably as an RNA 3' end-processing factor. Required for growth and development in plants., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 7, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 7, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 7, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 1, "reported_phosphosites": 0, "reported_mutagensis": 5, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 0, "biomarker_type": "", "glycan_count": 1, "disease_count": 0, "glyco_site_count": 7, "binding_glycan_count": 0, "secondary_ac_list": "Q9FY53", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005634 nucleus;GO:0005847 mRNA cleavage and polyadenylation specificity factor complex;GO:0080008 Cul4-RING E3 ubiquitin ligase complex", "go_biological_process": "GO:0030154 cell differentiation;GO:0031124 mRNA 3'-end processing;GO:0009793 embryo development ending in seed dormancy;GO:0009908 flower development;GO:0009909 regulation of flower development", "synthesized_glycan_count": 0, "hit_score": 1.6, "record_id": "Q6NLV4-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0100000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9FIG9-1", "uniprot_id": [ { "id": "ARC6_ARATH", "url": "https://www.uniprot.org/uniprot/Q9FIG9", "type": "external" } ], "mass": 88260.0, "length": 801, "protein_name": "Protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 6, chloroplastic", "gene_name": "ARC6", "organism": "Arabidopsis", "refseq_name": "Chaperone DnaJ-domain superfamily protein", "refseq_ac": [ { "id": "NP_199063", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_199063", "type": "external" } ], "gene_names_uniprotkb": "ARC6; MDH9.18; MDH9_18", "gene_names_refseq": "ACCUMULATION AND REPLICATION OF CHLOROPLASTS 6; ARC6; MDH9.18; MDH9_18", "protein_names_uniprotkb": "Protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 6, chloroplastic; AtARC6", "protein_names_refseq": "Chaperone DnaJ-domain superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G42480)", "pathway_count": 1, "publication_count": 30, "publication_id_list": "10048488;10417716;11130714;11975738;12232400;12897262;14593172;15928083;16146521;18284374;18764889;18812496;19318374;19995726;22028775;22823492;23020316;23111157;26452626;26527658;27862469;27988788;28248291;29138260;29466386;29769312;29967285;30252596;8537433;9489024", "class_list": "", "function": "Component of the plastid division machinery consisting in a binary fission accomplished by the simultaneous constriction of the FtsZ ring on the stromal side of the inner envelope membrane, and the ARC5 ring on the cytosolic side of the outer envelope membrane (PubMed:28248291, PubMed:29466386). Involved in the initiation of proplastid and plastid division (including chloroplasts, statoliths and leukoplasts) (PubMed:29466386). Promotes the assembly and/or stabilization of the plastid-dividing FtsZ ring, functioning as an antagonistic regulator of FtsZ dynamics against CDP1 and facilitating MCD1 positioning to membrane tethered FtsZ filaments to form the chloroplast Z-Ring; inhibits GDP-induced disassembly of FTSZ2 but enables ARC3 binding to FTSZ2-1 (PubMed:29138260, PubMed:29466386, PubMed:29769312, PubMed:29967285). Relays plastid division site position between stroma and outer surface via interactions with the stromal FtsZ ring and the outer membrane PDV2 that recruits cytoplasmic ARC5 ring (PubMed:28248291). Required for plastid equatorial positioning of PDV2 and ARC5. May contribute to gravitropism in stems and hypocotyls. Seems to influence stromule (stroma-filled tubular extensions of the plastid envelope membrane) length and frequency., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 4, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q7XAR9;Q7XAS0;Q7XAS1", "ec_number_list": [], "go_molecular_function": "GO:0042803 protein homodimerization activity", "go_cellular_component": "GO:0009507 chloroplast;GO:0009536 plastid;GO:0009706 chloroplast inner membrane;GO:0009941 chloroplast envelope", "go_biological_process": "GO:0009658 chloroplast organization;GO:0009739 response to gibberellin;GO:0010020 chloroplast fission", "synthesized_glycan_count": 0, "hit_score": 3.1, "record_id": "Q9FIG9-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9SQK3-1", "uniprot_id": [ { "id": "EM506_ARATH", "url": "https://www.uniprot.org/uniprot/Q9SQK3", "type": "external" } ], "mass": 35461.0, "length": 315, "protein_name": "Ankyrin repeat domain-containing protein EMB506, chloroplastic", "gene_name": "EMB506", "organism": "Arabidopsis", "refseq_name": "Ankyrin repeat family protein", "refseq_ac": [ { "id": "NP_198832", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_198832", "type": "external" } ], "gene_names_uniprotkb": "EMB506; EMB139; EMBRYO DEFECTIVE 139; MSN9.60; MSN9_60; embryo defective 506", "gene_names_refseq": "EMB139; EMB506; EMBRYO DEFECTIVE 139; MSN9.60; MSN9_60; embryo defective 506", "protein_names_uniprotkb": "Ankyrin repeat domain-containing protein EMB506, chloroplastic; Protein EMBRYO DEFECTIVE 506", "protein_names_refseq": "Ankyrin repeat family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G40160)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "10074714;11130714;11489192;14593172;16786300;17092312;27862469;9679202", "class_list": "", "function": "Involved in the initial differentiation of the proplastid during the embryo development. Also required for correct cotyledon, true leaf and cauline leaf margin development., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0140693 molecular condensate scaffold activity", "go_cellular_component": "GO:0009507 chloroplast", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "Q9SQK3-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q6R032-1", "uniprot_id": [ { "id": "MB3R5_ARATH", "url": "https://www.uniprot.org/uniprot/Q6R032", "type": "external" } ], "mass": 61732.0, "length": 548, "protein_name": "Transcription factor MYB3R-5", "gene_name": "MYB3R-5; MYB3R5", "organism": "Arabidopsis", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "MYB3R-5; MYB3R5; ATMYB3R5; T1E22.80; T1E22_80; myb domain protein 3r-5", "gene_names_refseq": "", "protein_names_uniprotkb": "Transcription factor MYB3R-5; Myb-related protein 3R-5", "protein_names_refseq": "", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G02320)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "11130714;11597504;16463103;17287251;26069325;27862469", "class_list": "", "function": "Transcription factor that binds 5'-AACGG-3' motifs in gene promoters (By similarity). Transcription repressor that regulates organ growth. Binds to the promoters of G2/M-specific genes and to E2F target genes to prevent their expression in post-mitotic cells and to restrict the time window of their expression in proliferating cells (PubMed:26069325)., [UniProtKB, UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q94FL8;Q9LZ93", "ec_number_list": [], "go_molecular_function": "GO:0003700 DNA-binding transcription factor activity;GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding;GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific;GO:0043565 sequence-specific DNA binding;GO:0003677 DNA binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0008285 negative regulation of cell population proliferation;GO:0006355 regulation of DNA-templated transcription;GO:0045892 negative regulation of DNA-templated transcription;GO:0009751 response to salicylic acid", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q6R032-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q5XV40-1", "uniprot_id": [ { "id": "LAZY1_ARATH", "url": "https://www.uniprot.org/uniprot/Q5XV40", "type": "external" } ], "mass": 40512.0, "length": 358, "protein_name": "Protein LAZY 1", "gene_name": "LAZY1", "organism": "Arabidopsis", "refseq_name": "regulator of nonsense transcript protein", "refseq_ac": [ { "id": "NP_196913", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_196913", "type": "external" } ], "gene_names_uniprotkb": "LAZY1; AtLAZY1; LA1; LAZY 1; LZY1; MUA22.9; MUA22_9", "gene_names_refseq": "AtLAZY1; LAZY 1; LAZY1; MUA22.9; MUA22_9", "protein_names_uniprotkb": "Protein LAZY 1; AtLA1; AtLAZY1; Protein LAZY1-LIKE 1", "protein_names_refseq": "regulator of nonsense transcript protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G14090)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "11130714;22060019;23331961;25028496;27862469;28765510;28821594;31818902;32269265;9501997", "class_list": "", "function": "Involved in the regulation of shoot gravitropism (PubMed:23331961, PubMed:25028496). Involved in the regulation of inflorescence branch angle (PubMed:23331961). Functions redundantly with LAZY2, LAZY3 and LAZY4 to control plant architecture by coupling gravity sensing to the formation of auxin gradients (PubMed:28821594). Involved redundantly with LAZY2 and LAZY4 in the regulation of both shoot and root gravitropism (PubMed:28765510). Mediates gravity signaling in statocytes downstream of amyloplast displacement, leading to the generation of asymmetric auxin distribution in gravity-responding organs (PubMed:28765510). Regulates the direction of polar auxin transport in response to gravity through the control of asymmetric PIN3 expression in the root cap columella (PubMed:28765510). Regulation of auxin flow by the three proteins LAZY1, LAZY2 and LAZY4 in statocytes influences plant architecture by controlling the growth angle of lateral shoots and lateral roots (PubMed:28765510)., [UniProtKB, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 3, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9FMU1", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005634 nucleus;GO:0005886 plasma membrane", "go_biological_process": "GO:0009958 positive gravitropism;GO:0009959 negative gravitropism;GO:2000012 regulation of auxin polar transport;GO:0009630 gravitropism", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "Q5XV40-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q42606-1", "uniprot_id": [ { "id": "UPM1_ARATH", "url": "https://www.uniprot.org/uniprot/Q42606", "type": "external" } ], "mass": 39930.0, "length": 369, "protein_name": "S-adenosyl-L-methionine-dependent uroporphyrinogen III methyltransferase, chloroplastic", "gene_name": "UPM1", "organism": "Arabidopsis", "refseq_name": "urophorphyrin methylase 1", "refseq_ac": [ { "id": "NP_198901", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_198901", "type": "external" } ], "gene_names_uniprotkb": "UPM1; MHK7.8; MHK7_8; urophorphyrin methylase 1", "gene_names_refseq": "MHK7.8; MHK7_8; UPM1; urophorphyrin methylase 1", "protein_names_uniprotkb": "S-adenosyl-L-methionine-dependent uroporphyrinogen III methyltransferase, chloroplastic; 2.1.1.107; AtUPM1; Urophorphyrin III methylase; Urophorphyrin methylase 1", "protein_names_refseq": "urophorphyrin methylase 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G40850)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "11130714;14593172;15326282;20592802;27729721;27862469;29472934;9006913;9679202", "class_list": "", "function": "Essential protein required for siroheme biosynthesis (PubMed:20592802). Catalyzes the two successive C-2 and C-7 methylation reactions involved in the conversion of uroporphyrinogen III to precorrin-2 via the intermediate formation of precorrin-1 (PubMed:9006913). It is a step in the biosynthesis of siroheme (PubMed:9006913). Promotes nitrogen and sulfur assimilation as well as photosynthesis efficiency by triggering chlorophyll, nitrite reductase (NiR) and sulfite reductase (SiR) biosynthesis (PubMed:29472934)., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 2, "predicted_n_glycosites": 0, "predicted_o_glycosites": 2, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 2, "binding_glycan_count": 0, "secondary_ac_list": "Q96532", "ec_number_list": [ { "id": "2.1.1.107", "url": "https://www.rhea-db.org/rhea/?query=ec:2.1.1.107", "type": "external" } ], "go_molecular_function": "GO:0004851 uroporphyrin-III C-methyltransferase activity", "go_cellular_component": "GO:0009507 chloroplast", "go_biological_process": "GO:0009416 response to light stimulus;GO:0032259 methylation;GO:0019354 siroheme biosynthetic process;GO:0090352 regulation of nitrate assimilation;GO:1900058 regulation of sulfate assimilation", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "Q42606-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9LST3-1", "uniprot_id": [ { "id": "Y5142_ARATH", "url": "https://www.uniprot.org/uniprot/Q9LST3", "type": "external" } ], "mass": 40190.0, "length": 346, "protein_name": "B3 domain-containing protein At5g60142", "gene_name": "F15L12", "organism": "Arabidopsis", "refseq_name": "AP2/B3-like transcriptional factor family protein", "refseq_ac": [ { "id": "NP_001119463", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001119463", "type": "external" } ], "gene_names_uniprotkb": "F15L12", "gene_names_refseq": "", "protein_names_uniprotkb": "B3 domain-containing protein At5g60142", "protein_names_refseq": "AP2/B3-like transcriptional factor family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G60142)", "pathway_count": 1, "publication_count": 3, "publication_id_list": "11130714;18986826;27862469", "class_list": "", "function": "", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "F4JXH4", "ec_number_list": [], "go_molecular_function": "GO:0003677 DNA binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "Q9LST3-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q66GP0-1", "uniprot_id": [ { "id": "SR1P1_ARATH", "url": "https://www.uniprot.org/uniprot/Q66GP0", "type": "external" } ], "mass": 67559.0, "length": 604, "protein_name": "BTB/POZ domain-containing protein SR1IP1", "gene_name": "NCH1; SR1IP1", "organism": "Arabidopsis", "refseq_name": "Phototropic-responsive NPH3 family protein", "refseq_ac": [ { "id": "NP_680473", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_680473", "type": "external" } ], "gene_names_uniprotkb": "NCH1; SR1IP1; K8K14", "gene_names_refseq": "", "protein_names_uniprotkb": "BTB/POZ domain-containing protein SR1IP1; Protein ATSR1-INTERACTION PROTEIN 1", "protein_names_refseq": "Phototropic-responsive NPH3 family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G67385)", "pathway_count": 1, "publication_count": 13, "publication_id_list": "11130714;14593172;14993207;15749712;19376835;22060019;23111157;24528504;25561503;26091701;27862469;28011693;9501997", "class_list": "", "function": "Acts as a substrate-specific adapter of an E3 ubiquitin-protein ligase complex (CUL3-RBX1-BTB) which mediates the ubiquitination and subsequent proteasomal degradation of target proteins (Probable). Involved in disease resistance. Acts as a substrate adapter that recruits CAMTA3/SR1 for ubiquitination and degradation during pathogen infection. Acts as a positive regulator of plant defense by removing the defense suppressor CAMTA3/SR1 (PubMed:24528504)., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 21, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "F4K3Q2", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "GO:0016567 protein ubiquitination;GO:0042742 defense response to bacterium;GO:0009904 chloroplast accumulation movement", "synthesized_glycan_count": 0, "hit_score": 1.4, "record_id": "Q66GP0-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q6USK2-1", "uniprot_id": [ { "id": "CERK_ARATH", "url": "https://www.uniprot.org/uniprot/Q6USK2", "type": "external" } ], "mass": 68462.0, "length": 608, "protein_name": "Ceramide kinase", "gene_name": "ACD5; CERK", "organism": "Arabidopsis", "refseq_name": "Diacylglycerol kinase family protein", "refseq_ac": [ { "id": "NP_568756", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_568756", "type": "external" } ], "gene_names_uniprotkb": "ACD5; CERK; ACCELERATED CELL DEATH 5; ACD5; MWD22.24; MWD22_24", "gene_names_refseq": "ACCELERATED CELL DEATH 5; ACD5; MWD22.24; MWD22_24", "protein_names_uniprotkb": "Ceramide kinase; 2.7.1.138; AtCERK; Protein ACCELERATED CELL DEATH 5", "protein_names_refseq": "Diacylglycerol kinase family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G51290)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "10718197;11130714;14563678;27862469", "class_list": "", "function": "Catalyzes specifically the phosphorylation of ceramide to form ceramide 1-phosphate. Possesses high activity on ceramide analogs (C6, C8 synthetic ceramides) and lower activity on C6 and C8 dihydroceramides. Has weak activity on natural ceramides (a mixture of ceramides from bovine brain) and the synthetic substrate C2 ceramide. Has very poor activity on diacylglycerol and sphingosine. Ceramide is a critical sphingolipid metabolite that induces programmed cell death (PCD) in plants and ceramide-1-phosphate has a PCD suppressive effect. Thus, ceramide phosphorylation plays a role in the modulation of PCD and CERK activity is crucial for the maintenance of cell viability., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9LU45", "ec_number_list": [ { "id": "2.7.1.138", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.138", "type": "external" } ], "go_molecular_function": "GO:0001729 ceramide kinase activity;GO:0005524 ATP binding;GO:0005509 calcium ion binding;GO:0016301 kinase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0016020 membrane", "go_biological_process": "GO:0009617 response to bacterium;GO:0006672 ceramide metabolic process;GO:0009651 response to salt stress;GO:0043067 regulation of programmed cell death;GO:0012501 programmed cell death", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "Q6USK2-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9FGR0-1", "uniprot_id": [ { "id": "CPSF1_ARATH", "url": "https://www.uniprot.org/uniprot/Q9FGR0", "type": "external" } ], "mass": 158075.0, "length": 1442, "protein_name": "Cleavage and polyadenylation specificity factor subunit 1", "gene_name": "CPSF160", "organism": "Arabidopsis", "refseq_name": "cleavage and polyadenylation specificity factor 160", "refseq_ac": [ { "id": "NP_199979", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_199979", "type": "external" } ], "gene_names_uniprotkb": "CPSF160; ATCPSF160; K17N15.21; K17N15_21", "gene_names_refseq": "ATCPSF160; CPSF160; K17N15.21; K17N15_21; cleavage and polyadenylation specificity factor 160", "protein_names_uniprotkb": "Cleavage and polyadenylation specificity factor subunit 1; AtCPSF160; CPSF 160 kDa subunit; Cleavage and polyadenylation specificity factor 160 kDa subunit", "protein_names_refseq": "cleavage and polyadenylation specificity factor 160", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G51660)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "10718197;11130714;16897494;18479511;19439664;19573236;19748916;20466843;22060019;27862469", "class_list": "", "function": "CPSF plays a key role in pre-mRNA 3'-end formation, recognizing the AAUAAA signal sequence and interacting with poly(A)polymerase and other factors to bring about cleavage and poly(A) addition. This subunit is involved in the RNA recognition step of the polyadenylation reaction., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 7, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q8H1T4", "ec_number_list": [], "go_molecular_function": "GO:0003723 RNA binding;GO:0003676 nucleic acid binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006397 mRNA processing", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "Q9FGR0-1", "record_type": "protein", "filter_code": "0000000.0000101.010000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9FK47-1", "uniprot_id": [ { "id": "PHLA_ARATH", "url": "https://www.uniprot.org/uniprot/Q9FK47", "type": "external" } ], "mass": 45574.0, "length": 402, "protein_name": "Myb-related protein 1", "gene_name": "MYR1", "organism": "Arabidopsis", "refseq_name": "myb-related protein 1", "refseq_ac": [ { "id": "NP_197325", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_197325", "type": "external" } ], "gene_names_uniprotkb": "MYR1; ATMYR1; MRG7.20; MRG7_20; PHL10; myb-related protein 1", "gene_names_refseq": "ARABIDOPSIS MYB-RELATED PROTEIN 1; ATMYR1; MRG7.20; MRG7_20; MYR1; myb-related protein 1", "protein_names_uniprotkb": "Myb-related protein 1; Myb family transcription factor PHL10; Protein PHR1-LIKE 10", "protein_names_refseq": "myb-related protein 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G18240)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "11130714;11511543;12008900;14593172;15923329;21255164;24309816;27862469;9734815", "class_list": "", "function": "Transcription factor that may act on the GAL1 promoter (PubMed:12008900). Acts redundantly with MYR2 as a repressor of flowering and organ elongation under decreased light intensity (PubMed:21255164). Represses gibberellic acid (GA)-dependent responses and affects levels of bioactive GA (PubMed:21255164)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "F4JWK0;Q84WH5;Q94B34;Q9C5Y6", "ec_number_list": [], "go_molecular_function": "GO:0003677 DNA binding;GO:0003700 DNA-binding transcription factor activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005739 mitochondrion", "go_biological_process": "GO:0006351 DNA-templated transcription", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "Q9FK47-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q93ZR6-1", "uniprot_id": [ { "id": "WSD1_ARATH", "url": "https://www.uniprot.org/uniprot/Q93ZR6", "type": "external" } ], "mass": 54417.0, "length": 481, "protein_name": "Wax ester synthase/diacylglycerol acyltransferase 1", "gene_name": "WSD1", "organism": "Arabidopsis", "refseq_name": "O-acyltransferase (WSD1-like) family protein", "refseq_ac": [ { "id": "NP_001331809", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001331809", "type": "external" } ], "gene_names_uniprotkb": "WSD1; MNJ8.9; MNJ8_9", "gene_names_refseq": "MNJ8.9; MNJ8_9; WSD1", "protein_names_uniprotkb": "Wax ester synthase/diacylglycerol acyltransferase 1; 2.3.1.20; 2.3.1.75; DGAT; Diacylglycerol O-acyltransferase; Long-chain-alcohol O-fatty-acyltransferase; O-acyltransferase WSD1; WS/DGAT 1; WS; Wax synthase", "protein_names_refseq": "O-acyltransferase (WSD1-like) family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G37300)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "11130714;14593172;16299169;18621978;23505340;25561503;27862469;30729606", "class_list": "", "function": "Bifunctional wax ester synthase/diacylglycerol acyltransferase (PubMed:18621978). Involved in cuticular wax biosynthesis (PubMed:18621978, PubMed:30729606). Required to reduce leaf water loss, especially during drought (PubMed:30729606)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9FHT5", "ec_number_list": [ { "id": "2.3.1.75", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.1.75", "type": "external" }, { "id": "2.3.1.20", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.1.20", "type": "external" } ], "go_molecular_function": "GO:0004467 long-chain fatty acid-CoA ligase activity;GO:0004144 diacylglycerol O-acyltransferase activity;GO:0047196 long-chain-alcohol O-fatty-acyltransferase activity;GO:0008374 O-acyltransferase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005739 mitochondrion;GO:0005783 endoplasmic reticulum;GO:0005886 plasma membrane;GO:0005789 endoplasmic reticulum membrane", "go_biological_process": "GO:0009651 response to salt stress;GO:0009414 response to water deprivation;GO:0019432 triglyceride biosynthetic process;GO:0010025 wax biosynthetic process;GO:0009737 response to abscisic acid", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "Q93ZR6-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q56XR0-1", "uniprot_id": [ { "id": "BH071_ARATH", "url": "https://www.uniprot.org/uniprot/Q56XR0", "type": "external" } ], "mass": 36647.0, "length": 327, "protein_name": "Transcription factor bHLH71", "gene_name": "BHLH071; BHLH71", "organism": "Arabidopsis", "refseq_name": "beta HLH protein 71", "refseq_ac": [ { "id": "NP_001331893", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001331893", "type": "external" } ], "gene_names_uniprotkb": "BHLH071; BHLH71; EN17; MZA15.10; MZA15_10; bHLH071; beta HLH protein 71", "gene_names_refseq": "MZA15.10; MZA15_10; bHLH071; beta HLH protein 71", "protein_names_uniprotkb": "Transcription factor bHLH71; AtbHLH71; Basic helix-loop-helix protein 71; Transcription factor EN 17; bHLH 71; bHLH transcription factor bHLH071", "protein_names_refseq": "beta HLH protein 71", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G46690)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "10048488;11130714;12679534;12897250;14600211;17088607;27862469", "class_list": "", "function": "Transcription factor. May be involved in the differentiation of stomatal guard cells., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q8LB18;Q9FIQ6", "ec_number_list": [], "go_molecular_function": "GO:0003700 DNA-binding transcription factor activity;GO:0046983 protein dimerization activity;GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding;GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific;GO:0003677 DNA binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006357 regulation of transcription by RNA polymerase II;GO:0006355 regulation of DNA-templated transcription;GO:0010052 guard cell differentiation", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q56XR0-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q6NQL6-1", "uniprot_id": [ { "id": "LPPE2_ARATH", "url": "https://www.uniprot.org/uniprot/Q6NQL6", "type": "external" } ], "mass": 31530.0, "length": 286, "protein_name": "Lipid phosphate phosphatase epsilon 2, chloroplastic", "gene_name": "LPPE2; LPPEPSILON2", "organism": "Arabidopsis", "refseq_name": "Phosphatidic acid phosphatase (PAP2) family protein", "refseq_ac": [ { "id": "NP_001078807", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001078807", "type": "external" } ], "gene_names_uniprotkb": "LPPE2; LPPEPSILON2; K1F13.10; K1F13_10; LPPepsilon2", "gene_names_refseq": "K1F13.10; K1F13_10; LPPepsilon2; lipid phosphate phosphatase epsilon 2", "protein_names_uniprotkb": "Lipid phosphate phosphatase epsilon 2, chloroplastic; 3.1.3.-; AtLPPE2; Phosphatidic acid phosphatase epsilon 2; Plastidic phosphatidic acid phosphatase epsilon 2", "protein_names_refseq": "Phosphatidic acid phosphatase (PAP2) family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G66450)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "11130714;17652095;27862469;9734815", "class_list": "", "function": "Exhibits phosphatidate phosphatase (PAP) activity in vitro. May play a secondary role as PAP in plastids., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9FJZ4", "ec_number_list": [], "go_molecular_function": "GO:0008195 phosphatidate phosphatase activity;GO:0016787 hydrolase activity", "go_cellular_component": "GO:0009507 chloroplast;GO:0009706 chloroplast inner membrane;GO:0016020 membrane", "go_biological_process": "GO:0006651 diacylglycerol biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "Q6NQL6-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q6NQ88-1", "uniprot_id": [ { "id": "DDB2_ARATH", "url": "https://www.uniprot.org/uniprot/Q6NQ88", "type": "external" } ], "mass": 62829.0, "length": 557, "protein_name": "Protein DAMAGED DNA-BINDING 2", "gene_name": "DDB2", "organism": "Arabidopsis", "refseq_name": "damaged DNA binding 2", "refseq_ac": [ { "id": "NP_200684", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_200684", "type": "external" } ], "gene_names_uniprotkb": "DDB2; MZN1.20; MZN1_20; damaged DNA binding 2", "gene_names_refseq": "DDB2; MZN1.20; MZN1_20; damaged DNA binding 2", "protein_names_uniprotkb": "Protein DAMAGED DNA-BINDING 2; UV-damaged DNA-binding protein 2", "protein_names_refseq": "damaged DNA binding 2", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G58760)", "pathway_count": 1, "publication_count": 15, "publication_id_list": "10718197;11130714;14593172;16792691;17409070;18223036;18463617;18551167;20128879;20466843;22060019;23572148;25561503;27862469;30833711", "class_list": "", "function": "May function as the substrate recognition module for a DCX (DDB1-CUL4-X-box) E3 ubiquitin-protein ligase complex including DDB1A and CUL4 (By similarity). Required for DNA repair. Binds to DDB1A to form the UV-damaged DNA-binding protein complex (the UV-DDB complex). The UV-DDB complex may recognize UV-induced DNA damage and recruit proteins of the nucleotide excision repair pathway (the NER pathway) to initiate DNA repair (PubMed:18551167). Involved in UV-B tolerance and genome integrity. In association with ATCSA-1, is necessary for repair of UV-B-induced DNA lesions (PubMed:20128879)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9LUY5", "ec_number_list": [], "go_molecular_function": "GO:0008270 zinc ion binding;GO:0003684 damaged DNA binding", "go_cellular_component": "GO:0005634 nucleus;GO:0080008 Cul4-RING E3 ubiquitin ligase complex", "go_biological_process": "GO:0006281 DNA repair;GO:0009411 response to UV;GO:0016567 protein ubiquitination;GO:0010224 response to UV-B", "synthesized_glycan_count": 0, "hit_score": 1.6, "record_id": "Q6NQ88-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q43729-1", "uniprot_id": [ { "id": "PER57_ARATH", "url": "https://www.uniprot.org/uniprot/Q43729", "type": "external" } ], "mass": 34098.0, "length": 313, "protein_name": "Peroxidase 57", "gene_name": "PER57", "organism": "Arabidopsis", "refseq_name": "Peroxidase superfamily protein", "refseq_ac": [ { "id": "NP_197284", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_197284", "type": "external" } ], "gene_names_uniprotkb": "PER57; MVA3.170; MVA3.18; MVA3_170; P57", "gene_names_refseq": "MVA3.170; MVA3_170", "protein_names_uniprotkb": "Peroxidase 57; 1.11.1.7; ATP13a; Atperox P57; PRXR10", "protein_names_refseq": "Peroxidase superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G17820)", "pathway_count": 1, "publication_count": 11, "publication_id_list": "11027363;11130714;11706184;12034502;12172015;14593172;22060019;27862469;9405937;9675907;9738941", "class_list": "", "function": "Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress. These functions might be dependent on each isozyme/isoform in each plant tissue., [UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 2, "predicted_n_glycosites": 0, "predicted_o_glycosites": 2, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 2, "binding_glycan_count": 0, "secondary_ac_list": "Q84WN8", "ec_number_list": [ { "id": "1.11.1.7", "url": "https://www.rhea-db.org/rhea/?query=ec:1.11.1.7", "type": "external" }, { "id": "3.1.3.2", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.2", "type": "external" } ], "go_molecular_function": "GO:0046872 metal ion binding;GO:0020037 heme binding;GO:0004601 peroxidase activity;GO:0140825 lactoperoxidase activity", "go_cellular_component": "GO:0005576 extracellular region;GO:0005739 mitochondrion;GO:0009506 plasmodesma;GO:0009505 plant-type cell wall;GO:0005773 vacuole", "go_biological_process": "GO:0006979 response to oxidative stress;GO:0006950 response to stress;GO:0042744 hydrogen peroxide catabolic process", "synthesized_glycan_count": 0, "hit_score": 1.2, "record_id": "Q43729-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000001001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q500V9-1", "uniprot_id": [ { "id": "DPB2_ARATH", "url": "https://www.uniprot.org/uniprot/Q500V9", "type": "external" } ], "mass": 59540.0, "length": 526, "protein_name": "DNA polymerase epsilon subunit B", "gene_name": "DPB2", "organism": "Arabidopsis", "refseq_name": "DNA polymerase epsilon subunit B2", "refseq_ac": [ { "id": "NP_680197", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_680197", "type": "external" } ], "gene_names_uniprotkb": "DPB2; ATDPB2; CYCLOPS 2; CYL2", "gene_names_refseq": "ATDPB2; CYCLOPS 2; CYL2; DNA polymerase epsilon subunit B2; DPB2", "protein_names_uniprotkb": "DNA polymerase epsilon subunit B; AtDPB2; DNA polymerase II subunit 2; Protein CYCLOPS 2", "protein_names_refseq": "DNA polymerase epsilon subunit B2", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G22110)", "pathway_count": 1, "publication_count": 3, "publication_id_list": "11130714;16212602;27862469", "class_list": "", "function": "As accessory component of DNA polymerase II participates in chromosomal DNA replication. Required for the timing and determination of cell fate during plant embryogenesis and root pole development, by promoting cell cycle and cell type patterning. Necessary for proper shoot (SAM) and root apical meristem (RAM) functions (By similarity). Is essential to promote the first divisions of the zygote (PubMed:16212602)., [UniProtKB, UniProtKB, PubMed]; Participates in DNA repair and in chromosomal DNA replication., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q56XM7;Q9C577", "ec_number_list": [], "go_molecular_function": "GO:0003677 DNA binding;GO:0070182 DNA polymerase binding", "go_cellular_component": "GO:0008622 epsilon DNA polymerase complex;GO:0005634 nucleus", "go_biological_process": "GO:0051781 positive regulation of cell division;GO:0042276 error-prone translesion synthesis;GO:0006261 DNA-templated DNA replication;GO:0009793 embryo development ending in seed dormancy", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "Q500V9-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q5PNU3-1", "uniprot_id": [ { "id": "AMSH3_ARATH", "url": "https://www.uniprot.org/uniprot/Q5PNU3", "type": "external" } ], "mass": 57268.0, "length": 507, "protein_name": "AMSH-like ubiquitin thioesterase 3", "gene_name": "AMSH3", "organism": "Arabidopsis", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "AMSH3; FCAALL", "gene_names_refseq": "", "protein_names_uniprotkb": "AMSH-like ubiquitin thioesterase 3; 3.4.19.-; Deubiquitinating enzyme AMSH3", "protein_names_refseq": "", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G16144)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "10617198;20543027;26324913;27862469;9461215", "class_list": "", "function": "Zinc metalloprotease that cleaves 'Lys-48'- and 'Lys-63'-linked polyubiquitin chains, but is not implicated in protein degradation by the 26S proteasome, deneddylation, or desumoylation. Required for intracellular trafficking (e.g. trafficking from the Golgi to the vacuole and the vacuolar trafficking of endocytosed cargo), endocytosis and vacuole biogenesis., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0046872 metal ion binding;GO:0061578 K63-linked deubiquitinase activity;GO:0101005 deubiquitinase activity;GO:0140492 metal-dependent deubiquitinase activity;GO:0008237 metallopeptidase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005768 endosome;GO:0005770 late endosome;GO:0005774 vacuolar membrane", "go_biological_process": "GO:0006508 proteolysis;GO:0006897 endocytosis;GO:0015031 protein transport;GO:0070536 protein K63-linked deubiquitination;GO:0090316 positive regulation of intracellular protein transport", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q5PNU3-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9SX22-1", "uniprot_id": [ { "id": "RRP31_ARATH", "url": "https://www.uniprot.org/uniprot/Q9SX22", "type": "external" } ], "mass": 18472.0, "length": 166, "protein_name": "Small ribosomal subunit protein cS23z", "gene_name": "1", "organism": "Arabidopsis", "refseq_name": "Ribosomal protein PSRP-3/Ycf65", "refseq_ac": [ { "id": "NP_564934", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_564934", "type": "external" } ], "gene_names_uniprotkb": "1; F24J5.17; F24J5_17", "gene_names_refseq": "F24J5.17; F24J5_17; PSRP3/1; plastid-specific ribosomal protein 3/1", "protein_names_uniprotkb": "Small ribosomal subunit protein cS23z; 30S ribosomal protein 3-1, chloroplastic; PSRP-3 1; Plastid-specific 30S ribosomal protein 3-1", "protein_names_refseq": "Ribosomal protein PSRP-3/Ycf65", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G68590)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "11130712;14593172;27862469;36423343", "class_list": "", "function": "Component of the chloroplast ribosome (chloro-ribosome), a dedicated translation machinery responsible for the synthesis of chloroplast genome-encoded proteins, including proteins of the transcription and translation machinery and components of the photosynthetic apparatus., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q8LD87", "ec_number_list": [], "go_molecular_function": "GO:0003735 structural constituent of ribosome", "go_cellular_component": "GO:0005739 mitochondrion;GO:0005840 ribosome;GO:1990904 ribonucleoprotein complex;GO:0009535 chloroplast thylakoid membrane;GO:0009507 chloroplast", "go_biological_process": "GO:0032544 plastid translation;GO:0006412 translation", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "Q9SX22-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q42112-1", "uniprot_id": [ { "id": "RLA02_ARATH", "url": "https://www.uniprot.org/uniprot/Q42112", "type": "external" } ], "mass": 34133.0, "length": 320, "protein_name": "Large ribosomal subunit protein uL10y", "gene_name": "RPP0B", "organism": "Arabidopsis", "refseq_name": "Ribosomal protein L10 family protein", "refseq_ac": [ { "id": "NP_187531", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_187531", "type": "external" } ], "gene_names_uniprotkb": "RPP0B; F3L24.7; MZB10.24", "gene_names_refseq": "", "protein_names_uniprotkb": "Large ribosomal subunit protein uL10y; 60S acidic ribosomal protein P0-2", "protein_names_refseq": "Ribosomal protein L10 family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G09200)", "pathway_count": 1, "publication_count": 34, "publication_id_list": "11130713;11598216;14593172;16962150;17586839;17934214;18433157;18686298;19245862;19341826;19376835;19688752;20466843;21768351;22074104;22438062;22440515;22631563;23111157;23328941;23572148;23660473;23776212;23820729;24601666;24924143;25561503;26091701;26187819;27862469;28011693;29167316;36423343;8580968", "class_list": "", "function": "Ribosomal protein P0 is the functional equivalent of E.coli protein L10., [UniProtKB, UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 5, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q8LCI7;Q9SR42;Q9SS70", "ec_number_list": [], "go_molecular_function": "GO:0003729 mRNA binding;GO:0005507 copper ion binding;GO:0003735 structural constituent of ribosome;GO:0070180 large ribosomal subunit rRNA binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005730 nucleolus;GO:0005737 cytoplasm;GO:0005829 cytosol;GO:0022626 cytosolic ribosome", "go_biological_process": "GO:0010043 response to zinc ion;GO:0042254 ribosome biogenesis;GO:0046686 response to cadmium ion;GO:0042742 defense response to bacterium;GO:0002181 cytoplasmic translation", "synthesized_glycan_count": 0, "hit_score": 3.5, "record_id": "Q42112-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q42569-1", "uniprot_id": [ { "id": "C90A1_ARATH", "url": "https://www.uniprot.org/uniprot/Q42569", "type": "external" } ], "mass": 53785.0, "length": 472, "protein_name": "3beta,22alpha-dihydroxysteroid 3-dehydrogenase", "gene_name": "CPD; CYP90A1", "organism": "Arabidopsis", "refseq_name": "Cytochrome P450 superfamily protein", "refseq_ac": [ { "id": "NP_196188", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_196188", "type": "external" } ], "gene_names_uniprotkb": "CPD; CYP90A1; CABBAGE 3; CBB3; CPD; CYP90A1; CYP90A; CYP90; CYTOCHROME P450 90A1; CYTOCHROME P450 MONOOXYGENASE; CYTOCHROME P450; DWARF 3; DWF3; MJJ3.9; MJJ3_9", "gene_names_refseq": "CABBAGE 3; CBB3; CONSTITUTIVE PHOTOMORPHOGENIC DWARF; CPD; CYP90A1; CYP90A; CYP90; CYTOCHROME P450 90A1; CYTOCHROME P450 MONOOXYGENASE; CYTOCHROME P450; DWARF 3; DWF3; MJJ3.9; MJJ3_9", "protein_names_uniprotkb": "3beta,22alpha-dihydroxysteroid 3-dehydrogenase; (22R,23R)-22,23-dihydroxy-campest-4-en-3-one synthase; (22S,24R)-22-hydroxy-5alpha-ergostan-3-one synthase; (22S,24R)-22-hydroxyergost-4-en-3-one synthase; 1.14.19.79; 3-dehydro-6-deoxoteasterone synthase; AtCYP90A1; Cytochrome P450 90A1; Protein CONSTITUTIVE PHOTOMORPHOGENESIS AND DWARFISM", "protein_names_refseq": "Cytochrome P450 superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G05690)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "11130714;14593172;22060019;22822057;27862469;8612270;9330910", "class_list": "", "function": "Catalyzes C3-oxidation steps in brassinosteroids biosynthesis (PubMed:22822057). Converts (22S)-22-hydroxycampesterol (22-OHCR) to (22S,24R)-22-hydroxyergost-4-en-3-one (22-hydroxy-campesta-4-en-3-one, 22-OH-4-en-3-one), 6-deoxocathasterone (6-deoxoCT) to (22S,24R)-22-hydroxy-5alpha-ergostan-3-one (22-hydroxy-campesta-3-one, 22-OH-3-one), (22R,23R)-22,23-dihydroxycampesterol (22,23-diOHCR) to (22R,23R)-22,23-dihydroxy-campest-4-en-3-one (22,23-diOH-4-en-3-one), and 6-deoxoteasterone (6-deoxoTE) to 3-dehydro-6-deoxoteasterone (6-deoxo3DT, 6-deoxo-3-DHT) (PubMed:22822057)., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [ { "id": "1.14.19.79", "url": "https://www.rhea-db.org/rhea/?query=ec:1.14.19.79", "type": "external" } ], "go_molecular_function": "GO:0005506 iron ion binding;GO:0020037 heme binding;GO:0004497 monooxygenase activity;GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen", "go_cellular_component": "GO:0005739 mitochondrion;GO:0016020 membrane", "go_biological_process": "GO:0016132 brassinosteroid biosynthetic process;GO:0009414 response to water deprivation;GO:0009416 response to light stimulus;GO:0010224 response to UV-B;GO:0009911 positive regulation of flower development", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q42569-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q94JZ8-1", "uniprot_id": [ { "id": "PUX7_ARATH", "url": "https://www.uniprot.org/uniprot/Q94JZ8", "type": "external" } ], "mass": 51808.0, "length": 468, "protein_name": "Plant UBX domain-containing protein 7", "gene_name": "PUX7", "organism": "Arabidopsis", "refseq_name": "UBX domain-containing protein", "refseq_ac": [ { "id": "NP_563954", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_563954", "type": "external" } ], "gene_names_uniprotkb": "PUX7; AtPUX7; T5E21.7; T5E21_7", "gene_names_refseq": "AtPUX7; PUX7; T5E21.7; T5E21_7; plant UBX domain-containing protein 7", "protein_names_uniprotkb": "Plant UBX domain-containing protein 7; PUX7", "protein_names_refseq": "UBX domain-containing protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G14570)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "11130712;14593172;19423640;22223895;23747397;25561503;27862469", "class_list": "", "function": "Acts as a bridge between CDC48A and ubiquitin, suggesting a role in targeted protein degradation., [UniProtKB, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 3, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "Q9MA26", "ec_number_list": [], "go_molecular_function": "GO:0030674 protein-macromolecule adaptor activity;GO:0043130 ubiquitin binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm", "go_biological_process": "GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q94JZ8-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000001001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q4F883-1", "uniprot_id": [ { "id": "SG101_ARATH", "url": "https://www.uniprot.org/uniprot/Q4F883", "type": "external" } ], "mass": 62066.0, "length": 537, "protein_name": "Senescence-associated carboxylesterase 101", "gene_name": "SAG101", "organism": "Arabidopsis", "refseq_name": "senescence-associated gene 101", "refseq_ac": [ { "id": "NP_568307", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_568307", "type": "external" } ], "gene_names_uniprotkb": "SAG101; F2G14.50; F2G14_50; senescence-associated gene 101", "gene_names_refseq": "F2G14.50; F2G14_50; SAG101; senescence-associated gene 101", "protein_names_uniprotkb": "Senescence-associated carboxylesterase 101; 3.1.1.1", "protein_names_refseq": "senescence-associated gene 101", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G14930)", "pathway_count": 1, "publication_count": 11, "publication_id_list": "11130714;11971136;16040633;19143996;21301097;21434927;22072959;23356583;24331460;25561503;27862469", "class_list": "", "function": "Acyl hydrolase that triggers the leaf senescence onset. Can use triolein as substrate to produce oleic acids., [UniProtKB]; Involved in the EDS1-dependent intrinsic and indispensable resistance signaling pathway; together with PAD4, required for programmed cell death triggered by RPS4 in response to avirulent pathogens (e.g. P.syringae pv. tomato strain DC3000 and H.parasitica isolates CALA2 and EMWA1) and in restricting the growth of virulent pathogens (e.g. H.parasitica isolates NOCO2 and P.syringae pv. tomato strain DC3000 avrRps4). Contributes in reinforcing the immune response around hypersensitive response foci (PubMed:21434927). Regulates the nuclear localization of EDS1. Essential for the RPP8/HRT-mediated resistance to the turnip crinkle virus (TCV). Involved in the post-invasion resistance to P.pachyrhizi in the mesophyll., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 4, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "F4K898;Q8LCZ8;Q9LFR2", "ec_number_list": [ { "id": "3.1.1.1", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.1.1", "type": "external" } ], "go_molecular_function": "GO:0016298 lipase activity;GO:0106435 carboxylesterase activity;GO:0052689 carboxylic ester hydrolase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0016020 membrane;GO:0009507 chloroplast", "go_biological_process": "GO:0050829 defense response to Gram-negative bacterium;GO:0016042 lipid catabolic process;GO:0002230 positive regulation of defense response to virus by host;GO:1900426 positive regulation of defense response to bacterium;GO:0009626 plant-type hypersensitive response", "synthesized_glycan_count": 0, "hit_score": 1.2, "record_id": "Q4F883-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q66GQ6-1", "uniprot_id": [ { "id": "IP5P5_ARATH", "url": "https://www.uniprot.org/uniprot/Q66GQ6", "type": "external" } ], "mass": 59930.0, "length": 529, "protein_name": "Type I inositol polyphosphate 5-phosphatase 5", "gene_name": "BST1; IP5P5", "organism": "Arabidopsis", "refseq_name": "DNAse I-like superfamily protein", "refseq_ac": [ { "id": "NP_001318880", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001318880", "type": "external" } ], "gene_names_uniprotkb": "BST1; IP5P5; BRISTLED 1; BST1; DEFORMED ROOT HAIRS 4; DER4; MQN23.2; MQN23_2; MRH3", "gene_names_refseq": "BRISTLED 1; BST1; DEFORMED ROOT HAIRS 4; DER4; MQN23.2; MQN23_2; MRH3", "protein_names_uniprotkb": "Type I inositol polyphosphate 5-phosphatase 5; 3.1.3.-; At5PTase5; Protein BRISTLED 1; Protein DEFORMED ROOT HAIRS 4", "protein_names_refseq": "DNAse I-like superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G65090)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "11041890;11130714;11402208;15863435;16367956;24924143;27862469;9734815", "class_list": "", "function": "May be involved in the regulation of root hairs development. Required for restricting both the size of the root-hair initiation site and the width of the root hairs during the transition to tip growth, but is not required for normal subsequent tip growth., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9FJQ6", "ec_number_list": [], "go_molecular_function": "GO:0004439 phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity;GO:0004445 inositol-polyphosphate 5-phosphatase activity;GO:0034485 phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity", "go_cellular_component": "GO:0005737 cytoplasm", "go_biological_process": "GO:0046856 phosphatidylinositol dephosphorylation;GO:0009932 cell tip growth;GO:0010053 root epidermal cell differentiation;GO:0048765 root hair cell differentiation;GO:0048766 root hair initiation", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "Q66GQ6-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q58G47-1", "uniprot_id": [ { "id": "TIF6A_ARATH", "url": "https://www.uniprot.org/uniprot/Q58G47", "type": "external" } ], "mass": 33632.0, "length": 310, "protein_name": "Protein TIFY 6A", "gene_name": "JAZ4; TIFY6A", "organism": "Arabidopsis", "refseq_name": "jasmonate-zim-domain protein 4", "refseq_ac": [ { "id": "NP_175283", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_175283", "type": "external" } ], "gene_names_uniprotkb": "JAZ4; TIFY6A; AtJAZ4; JAZ4; T1N15.11; T1N15_11; TIFY DOMAIN PROTEIN 6A; TIFY6A; jasmonate-zim-domain protein 4", "gene_names_refseq": "AtJAZ4; JAZ4; T1N15.11; T1N15_11; TIFY DOMAIN PROTEIN 6A; TIFY6A; jasmonate-zim-domain protein 4", "protein_names_uniprotkb": "Protein TIFY 6A; Jasmonate ZIM domain-containing protein 4", "protein_names_refseq": "jasmonate-zim-domain protein 4", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G48500)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "11130712;17499004;17637675;17675405;18223147;19151223;19309455;20360743;27862469;31988260", "class_list": "", "function": "Repressor of jasmonate responses (PubMed:19151223). Interacts with and suppresses RHD6 and RSL1 transcription factor activities to negatively regulate jasmonate-stimulated root hair development (PubMed:31988260)., [UniProtKB, PubMed, PubMed]; Repressor of jasmonate responses., [UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9LP75", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0009409 response to cold;GO:0009611 response to wounding;GO:0031347 regulation of defense response;GO:0009861 jasmonic acid and ethylene-dependent systemic resistance", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "Q58G47-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q6ZY51-1", "uniprot_id": [ { "id": "PWD_ARATH", "url": "https://www.uniprot.org/uniprot/Q6ZY51", "type": "external" } ], "mass": 131323.0, "length": 1196, "protein_name": "Phosphoglucan, water dikinase, chloroplastic", "gene_name": "GWD3; PWD", "organism": "Arabidopsis", "refseq_name": "chloroplastidic phosphoglucan, water dikinase (ATGWD3)", "refseq_ac": [ { "id": "NP_198009", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_198009", "type": "external" } ], "gene_names_uniprotkb": "GWD3; PWD; ATGWD3; F9D12.19; F9D12.1; F9D12_1; OK1; PHOSPHOGLUCAN WATER DIKINASE; PWD", "gene_names_refseq": "ATGWD3; F9D12.1; F9D12_1; OK1; PHOSPHOGLUCAN WATER DIKINASE; PWD", "protein_names_uniprotkb": "Phosphoglucan, water dikinase, chloroplastic; 2.7.9.5", "protein_names_refseq": "chloroplastidic phosphoglucan, water dikinase (ATGWD3)", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G26570)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "11130714;14593172;15618411;15686522;22223895;23572148;25561503;27862469;30833711", "class_list": "", "function": "Mediates the incorporation of phosphate into starch-like phospho-alpha-glucan, mostly at the C-3 position of glucose units. Required for starch degradation, suggesting that the phosphate content of starch regulates its degradability., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 3, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O81504;O81505;Q5XMK9;Q84TI8", "ec_number_list": [ { "id": "2.7.9.5", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.9.5", "type": "external" } ], "go_molecular_function": "GO:0005524 ATP binding;GO:0046872 metal ion binding;GO:2001070 starch binding;GO:0019200 carbohydrate kinase activity;GO:0051752 phosphoglucan, water dikinase activity", "go_cellular_component": "GO:0009507 chloroplast;GO:0009536 plastid;GO:0009570 chloroplast stroma", "go_biological_process": "GO:0005983 starch catabolic process;GO:0046777 protein autophosphorylation;GO:0005982 starch metabolic process", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "Q6ZY51-1", "record_type": "protein", "filter_code": "0000000.0000101.010000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q6R2J8-1", "uniprot_id": [ { "id": "SRF8_ARATH", "url": "https://www.uniprot.org/uniprot/Q6R2J8", "type": "external" } ], "mass": 76086.0, "length": 703, "protein_name": "Protein STRUBBELIG-RECEPTOR FAMILY 8", "gene_name": "SRF8", "organism": "Arabidopsis", "refseq_name": "STRUBBELIG-receptor family 8", "refseq_ac": [ { "id": "NP_193944", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_193944", "type": "external" } ], "gene_names_uniprotkb": "SRF8; F1N20.230; F1N20_230; STRUBBELIG-receptor family 8", "gene_names_refseq": "F1N20.230; F1N20_230; SRF8; STRUBBELIG-receptor family 8", "protein_names_uniprotkb": "Protein STRUBBELIG-RECEPTOR FAMILY 8; Leucine-rich repeat receptor kinase-like protein SRF8", "protein_names_refseq": "STRUBBELIG-receptor family 8", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G22130)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "10617198;17397538;23111157;25561503;27862469", "class_list": "", "function": "", "predicted_glycosites": 5, "predicted_n_glycosites": 5, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 10, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 5, "binding_glycan_count": 0, "secondary_ac_list": "O65461", "ec_number_list": [], "go_molecular_function": "GO:0004672 protein kinase activity;GO:0005524 ATP binding", "go_cellular_component": "GO:0005576 extracellular region;GO:0005634 nucleus;GO:0005886 plasma membrane;GO:0016020 membrane", "go_biological_process": "GO:0007165 signal transduction", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q6R2J8-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000010001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8S8M5-1", "uniprot_id": [ { "id": "ABIL1_ARATH", "url": "https://www.uniprot.org/uniprot/Q8S8M5", "type": "external" } ], "mass": 33196.0, "length": 298, "protein_name": "Protein ABIL1", "gene_name": "ABIL1", "organism": "Arabidopsis", "refseq_name": "ABI-1-like 1", "refseq_ac": [ { "id": "NP_566067", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_566067", "type": "external" } ], "gene_names_uniprotkb": "ABIL1; ABI-1-like 1; T3F17", "gene_names_refseq": "ABI-1-like 1; ABIL1", "protein_names_uniprotkb": "Protein ABIL1; Abl interactor-like protein 1; AtABIL1", "protein_names_refseq": "ABI-1-like 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G46225)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "10617197;11910074;15659634;25561503;27862469", "class_list": "", "function": "Involved in regulation of actin and microtubule organization. Part of a WAVE complex that activates the Arp2/3 complex (By similarity)., [UniProtKB, UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q8GWF6", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005856 cytoskeleton;GO:0031209 SCAR complex", "go_biological_process": "GO:0045010 actin nucleation;GO:0010090 trichome morphogenesis", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q8S8M5-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q42560-1", "uniprot_id": [ { "id": "ACO1_ARATH", "url": "https://www.uniprot.org/uniprot/Q42560", "type": "external" } ], "mass": 98152.0, "length": 898, "protein_name": "Aconitate hydratase 1", "gene_name": "ACO1", "organism": "Arabidopsis", "refseq_name": "aconitase 1", "refseq_ac": [ { "id": "NP_195308", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_195308", "type": "external" } ], "gene_names_uniprotkb": "ACO1; ACO; F4B14.100; F4B14_100; aconitase 1", "gene_names_refseq": "ACO1; F4B14.100; F4B14_100; aconitase 1", "protein_names_uniprotkb": "Aconitate hydratase 1; 4.2.1.3; Aconitase 1; Citrate hydro-lyase 1", "protein_names_refseq": "aconitase 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G35830)", "pathway_count": 1, "publication_count": 13, "publication_id_list": "10617198;11743114;14593172;14671022;17013749;17437406;22223895;23111157;25061985;25561503;27862469;30833711;7713917", "class_list": "", "function": "Catalyzes the isomerization of citrate to isocitrate via cis-aconitate., [UniProtKB, UniProtKB]; Catalyzes the isomerization of citrate to isocitrate via cis-aconitate. Contributes to oxidative stress tolerance (PubMed:17013749). May have a role in respiration (PubMed:25061985)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 4, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9SZT1", "ec_number_list": [ { "id": "4.2.1.3", "url": "https://www.rhea-db.org/rhea/?query=ec:4.2.1.3", "type": "external" } ], "go_molecular_function": "GO:0003994 aconitate hydratase activity;GO:0051539 4 iron, 4 sulfur cluster binding;GO:0030350 iron-responsive element binding;GO:0005507 copper ion binding;GO:0048027 mRNA 5'-UTR binding", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005739 mitochondrion;GO:0005829 cytosol;GO:0005886 plasma membrane;GO:0009506 plasmodesma", "go_biological_process": "GO:0006099 tricarboxylic acid cycle;GO:0006101 citrate metabolic process;GO:0006102 isocitrate metabolic process;GO:1990641 response to iron ion starvation;GO:0043436 oxoacid metabolic process", "synthesized_glycan_count": 0, "hit_score": 1.4, "record_id": "Q42560-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q5S2C3-1", "uniprot_id": [ { "id": "PIR_ARATH", "url": "https://www.uniprot.org/uniprot/Q5S2C3", "type": "external" } ], "mass": 145488.0, "length": 1282, "protein_name": "Protein PIR", "gene_name": "PIR121; PIR", "organism": "Arabidopsis", "refseq_name": "transcription activator", "refseq_ac": [ { "id": "NP_197342", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_197342", "type": "external" } ], "gene_names_uniprotkb": "PIR121; PIR; ATSRA1; F20L16.130; F20L16_130; KLK; KLUNKER; PIROGI 121; PIROGI; PIRP; PIR; SRA1", "gene_names_refseq": "ATSRA1; F20L16.130; F20L16_130; KLK; KLUNKER; PIR121; PIROGI 121; PIROGI; PIRP; PIR; SRA1", "protein_names_uniprotkb": "Protein PIR; AtSRA1; PIR of plants; Protein KLUNKER; Protein PIROGI", "protein_names_refseq": "transcription activator", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G18410)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "11130714;15294869;15296760;15316111;15516496;27862469", "class_list": "", "function": "Involved in regulation of actin and microtubule organization. Part of a WAVE complex that activates the ARP2/3 complex. Interacts with the active form of RHO-family GTPases., [UniProtKB]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "Q3E9F2;Q6DLU3", "ec_number_list": [], "go_molecular_function": "GO:0031267 small GTPase binding;GO:0000340 RNA 7-methylguanosine cap binding", "go_cellular_component": "GO:0005737 cytoplasm;GO:0031209 SCAR complex", "go_biological_process": "GO:0006417 regulation of translation;GO:0000902 cell morphogenesis;GO:0030036 actin cytoskeleton organization;GO:0045010 actin nucleation;GO:0030833 regulation of actin filament polymerization", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q5S2C3-1", "record_type": "protein", "filter_code": "0000000.0000101.010000.100000000000000000.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q6WWW4-1", "uniprot_id": [ { "id": "UPL3_ARATH", "url": "https://www.uniprot.org/uniprot/Q6WWW4", "type": "external" } ], "mass": 202928.0, "length": 1888, "protein_name": "E3 ubiquitin-protein ligase UPL3", "gene_name": "KAK; UPL3", "organism": "Arabidopsis", "refseq_name": "HECT ubiquitin protein ligase family protein KAK", "refseq_ac": [ { "id": "NP_001329354", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001329354", "type": "external" } ], "gene_names_uniprotkb": "KAK; UPL3; F20M13.160; F20M13.170; F20M13_160; KAKTUS; KAK; UBIQUITIN-PROTEIN LIGASE 3; UBIQUITIN_PROTEIN LIGASE; UPL3", "gene_names_refseq": "AT4G38610; F20M13.160; F20M13_160; KAKTUS; KAK; UBIQUITIN-PROTEIN LIGASE 3; UBIQUITIN_PROTEIN LIGASE; UPL3", "protein_names_uniprotkb": "E3 ubiquitin-protein ligase UPL3; 2.3.2.26; HECT ubiquitin-protein ligase 3; HECT-type E3 ubiquitin transferase UPL3; Protein KAKTUS; Ubiquitin-protein ligase 3", "protein_names_refseq": "HECT ubiquitin protein ligase family protein KAK", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G38600)", "pathway_count": 1, "publication_count": 18, "publication_id_list": "10224275;10617198;12969426;14530964;17317660;19376835;22074104;23111157;23328941;23572148;23776212;23820729;25561503;27532006;27862469;28011693;29654922;30833711", "class_list": "", "function": "E3 ubiquitin-protein ligase which mediates ubiquitination., [UniProtKB, UniProtKB]; Probable E3 ubiquitin-protein ligase which mediates ubiquitination and subsequent proteasomal degradation of target proteins. Involved in the repression of endoreduplication process and the cell morphogenesis in the trichomes., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 2, "predicted_n_glycosites": 0, "predicted_o_glycosites": 2, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 37, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 2, "binding_glycan_count": 0, "secondary_ac_list": "Q0WN20;Q9SZN9;Q9SZP0", "ec_number_list": [], "go_molecular_function": "GO:0061630 ubiquitin protein ligase activity;GO:0004842 ubiquitin-protein transferase activity;GO:0016874 ligase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005886 plasma membrane", "go_biological_process": "GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process;GO:0000209 protein polyubiquitination;GO:0042023 DNA endoreduplication;GO:0010091 trichome branching;GO:0016567 protein ubiquitination", "synthesized_glycan_count": 0, "hit_score": 1.9, "record_id": "Q6WWW4-1", "record_type": "protein", "filter_code": "0000000.0000101.010000.100000000000000000.0000000001001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9LN63-1", "uniprot_id": [ { "id": "BZR2_ARATH", "url": "https://www.uniprot.org/uniprot/Q9LN63", "type": "external" } ], "mass": 36486.0, "length": 335, "protein_name": "Protein BRASSINAZOLE-RESISTANT 2", "gene_name": "BES1; BZR2", "organism": "Arabidopsis", "refseq_name": "Brassinosteroid signaling positive regulator (BZR1) family protein", "refseq_ac": [ { "id": "NP_001077562", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001077562", "type": "external" } ], "gene_names_uniprotkb": "BES1; BZR2; 107 PROTEIN; BES1; BIS1; BRASSINAZOLE-RESISTANT 2; BRI1-EMS-SUPPRESSOR 1; BZR2; F18O14.4; F18O14.7; F18O14_4; F18O14_7", "gene_names_refseq": "107 PROTEIN; BES1; BRASSINAZOLE-RESISTANT 2; BRI1-EMS-SUPPRESSOR 1; BZR2; F18O14.7; F18O14_7", "protein_names_uniprotkb": "Protein BRASSINAZOLE-RESISTANT 2; Protein 107; Protein BIN2 SUBSTRATE 1; Protein BRI1-EMS-SUPPRESSOR 1", "protein_names_refseq": "Brassinosteroid signaling positive regulator (BZR1) family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G19320); (ath:AT1G19350)", "pathway_count": 2, "publication_count": 27, "publication_id_list": "11130712;11970900;12007405;12427989;14593172;15680330;18467490;19170933;19245862;19376835;20139304;20387034;20466843;23111157;23660473;23776212;24838002;24981610;25561503;26091701;27532006;27862469;28011693;28576847;29167316;29654922;30833711", "class_list": "", "function": "Functions in brassinosteroid signaling. May function as transcriptional repressor., [UniProtKB, UniProtKB]; Positive regulator of brassinosteroid (BR) signaling. Transcription factor that activates target gene expression by binding specifically to the DNA sequence 5'-CANNTG-3'(E box) through its N-terminal domain. Can bind individually to the promoter as a homodimer or synergistically as a heterodimer with BIM1, BIM2 or BIM3. The C-terminal domain is probably involved in transcriptional activation (PubMed:12007405, PubMed:15680330, PubMed:18467490, PubMed:19170933). Recruits the transcription elongation factor IWS1 to control BR-regulated gene expression (PubMed:20139304). Forms a trimeric complex with IWS1 and ASHH2/SDG8 to regulate BR-regulated gene expression (PubMed:24838002). Promotes quiescent center (QC) self-renewal by cell divisions in the primary root. Binds to the E-boxes of the BRAVO promoter to repress its expression (PubMed:24981610)., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 25, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "Q8LCX8;Q94JU1;Q9SEG5", "ec_number_list": [], "go_molecular_function": "GO:0003677 DNA binding;GO:0003700 DNA-binding transcription factor activity;GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005829 cytosol;GO:0009507 chloroplast", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006355 regulation of DNA-templated transcription;GO:0045892 negative regulation of DNA-templated transcription;GO:0042742 defense response to bacterium;GO:0009650 UV protection", "synthesized_glycan_count": 0, "hit_score": 2.8, "record_id": "Q9LN63-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000001001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q6R0H1-1", "uniprot_id": [ { "id": "LHY_ARATH", "url": "https://www.uniprot.org/uniprot/Q6R0H1", "type": "external" } ], "mass": 70438.0, "length": 645, "protein_name": "Protein LHY", "gene_name": "LHY", "organism": "Arabidopsis", "refseq_name": "Homeodomain-like superfamily protein", "refseq_ac": [ { "id": "NP_001030924", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001030924", "type": "external" } ], "gene_names_uniprotkb": "LHY; LATE ELONGATED HYPOCOTYL 1; LATE ELONGATED HYPOCOTYL; LHY1; T25K16.6; T25K16_6", "gene_names_refseq": "LATE ELONGATED HYPOCOTYL 1; LATE ELONGATED HYPOCOTYL; LHY1; LHY; T25K16.6; T25K16_6", "protein_names_uniprotkb": "Protein LHY; MYB-related transcription factor LHY; Protein LATE ELONGATED HYPOCOTYL", "protein_names_refseq": "Homeodomain-like superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G01060)", "pathway_count": 1, "publication_count": 17, "publication_id_list": "10535927;11130712;12015970;12574129;16463103;19095940;19218364;19286557;19339503;19423640;20233950;23111157;25012192;25561503;27862469;31429787;9657154", "class_list": "", "function": "Transcription factor involved in the circadian clock. Binds to the promoter region of APRR1/TOC1 and TCP21/CHE to repress their transcription. Represses both CCA1 and itself. May recognize the promoter of JMJ14 to regulates its expression during the night in a circadian manner (PubMed:31429787)., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 4, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "B9DFD7;B9DFM4;O81713;Q9MAM8", "ec_number_list": [], "go_molecular_function": "GO:0003700 DNA-binding transcription factor activity;GO:0000976 transcription cis-regulatory region binding;GO:0003677 DNA binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0009409 response to cold;GO:0006355 regulation of DNA-templated transcription;GO:0007623 circadian rhythm;GO:0042752 regulation of circadian rhythm", "synthesized_glycan_count": 0, "hit_score": 1.8, "record_id": "Q6R0H1-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000001001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9SAI2-1", "uniprot_id": [ { "id": "CAF1F_ARATH", "url": "https://www.uniprot.org/uniprot/Q9SAI2", "type": "external" } ], "mass": 31201.0, "length": 274, "protein_name": "Probable CCR4-associated factor 1 homolog 6", "gene_name": "CAF1-6; CAF1J", "organism": "Arabidopsis", "refseq_name": "Polynucleotidyl transferase, ribonuclease H-like superfamily protein", "refseq_ac": [ { "id": "NP_178193", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_178193", "type": "external" } ], "gene_names_uniprotkb": "CAF1-6; CAF1J; F23A5.13; F23A5_13", "gene_names_refseq": "F23A5.13; F23A5_13", "protein_names_uniprotkb": "Probable CCR4-associated factor 1 homolog 6; 3.1.13.4", "protein_names_refseq": "Polynucleotidyl transferase, ribonuclease H-like superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G80780)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "11130712;14593172;15010618;27862469", "class_list": "", "function": "Ubiquitous transcription factor required for a diverse set of processes. It is a component of the CCR4 complex involved in the control of gene expression (By similarity)., [UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0003723 RNA binding;GO:0046872 metal ion binding;GO:0004535 poly(A)-specific ribonuclease activity", "go_cellular_component": "GO:0005634 nucleus;GO:0000932 P-body;GO:0030015 CCR4-NOT core complex;GO:0005737 cytoplasm;GO:0030014 CCR4-NOT complex", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0042742 defense response to bacterium;GO:0000288 nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay;GO:0000289 nuclear-transcribed mRNA poly(A) tail shortening", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "Q9SAI2-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q93ZX1-1", "uniprot_id": [ { "id": "RFC4_ARATH", "url": "https://www.uniprot.org/uniprot/Q93ZX1", "type": "external" } ], "mass": 37508.0, "length": 339, "protein_name": "Replication factor C subunit 4", "gene_name": "EMB1968; RFC4", "organism": "Arabidopsis", "refseq_name": "ATPase family associated with various cellular activities (AAA)", "refseq_ac": [ { "id": "NP_564148", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_564148", "type": "external" } ], "gene_names_uniprotkb": "EMB1968; RFC4; EMB1968; F8K7.11; F8K7_11; RFC4; embryo defective 1968; replication factor C 4", "gene_names_refseq": "EMB1968; F8K7.11; F8K7_11; RFC4; embryo defective 1968; replication factor C 4", "protein_names_uniprotkb": "Replication factor C subunit 4; Activator 1 subunit 4; AtRFC4; Protein EMBRYO DEFECTIVE 1968", "protein_names_refseq": "ATPase family associated with various cellular activities (AAA)", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G21690)", "pathway_count": 1, "publication_count": 3, "publication_id_list": "11130712;14593172;27862469", "class_list": "", "function": "May be involved in DNA replication and thus regulate cell proliferation., [UniProtKB, UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9XI09", "ec_number_list": [], "go_molecular_function": "GO:0003677 DNA binding;GO:0005524 ATP binding;GO:0016887 ATP hydrolysis activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005730 nucleolus;GO:0005663 DNA replication factor C complex", "go_biological_process": "GO:0006281 DNA repair;GO:0006261 DNA-templated DNA replication;GO:0006260 DNA replication", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "Q93ZX1-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9M9B3-1", "uniprot_id": [ { "id": "COL8_ARATH", "url": "https://www.uniprot.org/uniprot/Q9M9B3", "type": "external" } ], "mass": 37501.0, "length": 319, "protein_name": "Zinc finger protein CONSTANS-LIKE 8", "gene_name": "BBX17; COL8", "organism": "Arabidopsis", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "BBX17; COL8; B-box domain protein 17; F27J15.10; F27J15_10", "gene_names_refseq": "", "protein_names_uniprotkb": "Zinc finger protein CONSTANS-LIKE 8", "protein_names_refseq": "", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G49130)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "11130712;12692345;19423640;27862469", "class_list": "", "function": "", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "B9DH35", "ec_number_list": [], "go_molecular_function": "GO:0003700 DNA-binding transcription factor activity;GO:0008270 zinc ion binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006355 regulation of DNA-templated transcription;GO:0009408 response to heat", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "Q9M9B3-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q6IMT1-1", "uniprot_id": [ { "id": "SAB_ARATH", "url": "https://www.uniprot.org/uniprot/Q6IMT1", "type": "external" } ], "mass": 292913.0, "length": 2603, "protein_name": "Protein SABRE", "gene_name": "SAB", "organism": "Arabidopsis", "refseq_name": "HYPERSENSITIVE TO PI STARVATION 4", "refseq_ac": [ { "id": "NP_176121", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_176121", "type": "external" } ], "gene_names_uniprotkb": "SAB; F16M22.5; F16M22_5; HPS4; SABRE; T18I24.18", "gene_names_refseq": "F16M22.5; F16M22_5; HPS4; SABRE; SAB; hypersensitive to Pi starvation 4", "protein_names_uniprotkb": "Protein SABRE; Protein HYPERSENSITIVE TO PI STARVATION 4", "protein_names_refseq": "HYPERSENSITIVE TO PI STARVATION 4", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G58250)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "11130712;14675453;22060019;22615140;25561503;26187819;27862469;7867930;8275864", "class_list": "", "function": "May be involved in membrane trafficking (By similarity). Required for cell expansion, especially in root cortex, probably by counteracting the action of ethylene in promoting cells radial expansion (PubMed:7867930, PubMed:8275864). Involved in female organ development (PubMed:14675453). Antagonistically interacts with ethylene signaling to regulate plant responses to Pi starvation (PubMed:22615140)., [UniProtKB, PubMed, PubMed, PubMed, UniProtKB, PubMed]", "predicted_glycosites": 16, "predicted_n_glycosites": 15, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 10, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 16, "binding_glycan_count": 0, "secondary_ac_list": "F4I9T5;Q0WN66;Q38969;Q9C6Q6;Q9C727", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005576 extracellular region;GO:0005794 Golgi apparatus", "go_biological_process": "GO:0030307 positive regulation of cell growth;GO:0016036 cellular response to phosphate starvation;GO:0009723 response to ethylene;GO:0010105 negative regulation of ethylene-activated signaling pathway;GO:0051510 regulation of unidimensional cell growth", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "Q6IMT1-1", "record_type": "protein", "filter_code": "0000000.0100101.010000.100000000000000000.0000000011001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q42565-1", "uniprot_id": [ { "id": "ASB1_ARATH", "url": "https://www.uniprot.org/uniprot/Q42565", "type": "external" } ], "mass": 30460.0, "length": 276, "protein_name": "Anthranilate synthase beta subunit 1, chloroplastic", "gene_name": "ASB1", "organism": "Arabidopsis", "refseq_name": "anthranilate synthase beta subunit 1", "refseq_ac": [ { "id": "NP_173893", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_173893", "type": "external" } ], "gene_names_uniprotkb": "ASB1; F4F7.39; F4F7_39; TRP4; TRYPTOPHAN BIOSYNTHESIS 4; WEAK ETHYLENE INSENSITIVE7; WEI7", "gene_names_refseq": "ANTHRANILATE SYNTHASE BETA SUBUNIT; ASB1; F4F7.39; F4F7_39; TRP4; TRYPTOPHAN BIOSYNTHESIS 4; WEAK ETHYLENE INSENSITIVE7; WEI7; anthranilate synthase beta subunit 1", "protein_names_uniprotkb": "Anthranilate synthase beta subunit 1, chloroplastic; 4.1.3.27; Anthranilate synthase component 2-1; Anthranilate synthase, glutamine amidotransferase component 2-1; Protein TRYPTOPHAN BIOSYNTHESIS 4; Protein WEAK ETHYLENE INSENSITIVE 7", "protein_names_refseq": "anthranilate synthase beta subunit 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G25220)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "11130712;14593172;15980261;18435826;27862469;8400875", "class_list": "", "function": "Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine-binding beta subunit of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS to produce anthranilate. Plays an important regulatory role in auxin production via the tryptophan-dependent biosynthetic pathway., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 2, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [ { "id": "4.1.3.27", "url": "https://www.rhea-db.org/rhea/?query=ec:4.1.3.27", "type": "external" } ], "go_molecular_function": "GO:0004049 anthranilate synthase activity", "go_cellular_component": "GO:0005739 mitochondrion;GO:0009507 chloroplast", "go_biological_process": "GO:0009617 response to bacterium;GO:0000162 L-tryptophan biosynthetic process;GO:0009723 response to ethylene;GO:0009851 auxin biosynthetic process;GO:0010311 lateral root formation", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q42565-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8LCE1-1", "uniprot_id": [ { "id": "GLN12_ARATH", "url": "https://www.uniprot.org/uniprot/Q8LCE1", "type": "external" } ], "mass": 39207.0, "length": 356, "protein_name": "Glutamine synthetase cytosolic isozyme 1-2", "gene_name": "GLN1-2; GSR2", "organism": "Arabidopsis", "refseq_name": "uncharacterized protein", "refseq_ac": [ { "id": "NP_176794", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_176794", "type": "external" } ], "gene_names_uniprotkb": "GLN1-2; GSR2; ATGSR2; F15E12.14; F15E12_14; GLN1:2; GLUTAMINE SYNTHETASE; GSR2; glutamine synthase clone F11; glutamine synthetase 1:2", "gene_names_refseq": "2; ATGSR2; F15E12.14; F15E12_14; GLN1; GLUTAMINE SYNTHETASE; GSR2; glutamine synthase clone F11; glutamine synthetase 1", "protein_names_uniprotkb": "Glutamine synthetase cytosolic isozyme 1-2; 2; 6.3.1.2; GLN1; Glutamate--ammonia ligase GLN1", "protein_names_refseq": "uncharacterized protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G66200)", "pathway_count": 1, "publication_count": 14, "publication_id_list": "10444084;10482686;11130712;14593172;14757761;19376835;21094157;21768351;22060019;22223895;23328941;23820729;24924143;27862469", "class_list": "", "function": "Low-affinity glutamine synthetase. May contribute to the homeostatic control of glutamine synthesis in roots., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9C8C7", "ec_number_list": [ { "id": "6.3.1.2", "url": "https://www.rhea-db.org/rhea/?query=ec:6.3.1.2", "type": "external" } ], "go_molecular_function": "GO:0003729 mRNA binding;GO:0005524 ATP binding;GO:0005507 copper ion binding;GO:0004356 glutamine synthetase activity;GO:1901149 salicylic acid binding", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005739 mitochondrion;GO:0005829 cytosol;GO:0022626 cytosolic ribosome;GO:0000325 plant-type vacuole", "go_biological_process": "GO:0006542 glutamine biosynthetic process;GO:0042128 nitrate assimilation", "synthesized_glycan_count": 0, "hit_score": 1.5, "record_id": "Q8LCE1-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q84L33-1", "uniprot_id": [ { "id": "RD23B_ARATH", "url": "https://www.uniprot.org/uniprot/Q84L33", "type": "external" } ], "mass": 39747.0, "length": 371, "protein_name": "Ubiquitin receptor RAD23b", "gene_name": "RAD23B", "organism": "Arabidopsis", "refseq_name": "Rad23 UV excision repair protein family", "refseq_ac": [ { "id": "NP_565216", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_565216", "type": "external" } ], "gene_names_uniprotkb": "RAD23B; AtAO1; F20B17.8; F20B17_8; RAD23-1; RAD23; RADIATION SENSITIVE23B", "gene_names_refseq": "Arabidopsis thaliana aldehyde oxidase 1; AtAO1; F20B17.8; F20B17_8; RAD23B; RAD23; RADIATION SENSITIVE23B", "protein_names_uniprotkb": "Ubiquitin receptor RAD23b; AtRAD23-1; AtRAD23b; Putative DNA repair protein RAD23-1; RAD23-like protein 1", "protein_names_refseq": "Rad23 UV excision repair protein family", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G79650)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "11130712;14593172;20059542;20086187;20399133;21764993;27862469;29283431", "class_list": "", "function": "May be involved in nucleotide excision repair (By similarity). Binds and presumably selects ubiquitin-conjugates for destruction. Prefers multiubiquitin chains rather than single ubiquitins, with a binding affinity for 'Lys-48'-linked ubiquitin chains. Acts as a ubiquitin receptor that associates with the 26S proteasomal docking subunit RPN10 for the indirect recognition of ubiquitinated substrates of ubiquitin/26S proteasome-mediated proteolysis (UPP). Involved in UV tolerance in both roots and hypocotyls, specifically in dark conditions (PubMed:29283431)., [UniProtKB, PubMed, PubMed, PubMed]; Multiubiquitin chain receptor involved in modulation of proteasomal degradation. Involved in nucleotide excision repair., [UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "Q84L34;Q8LA46;Q94CE9;Q9MA10", "ec_number_list": [], "go_molecular_function": "GO:0031593 polyubiquitin modification-dependent protein binding;GO:0003684 damaged DNA binding;GO:0043130 ubiquitin binding;GO:0070628 proteasome binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005654 nucleoplasm;GO:0005737 cytoplasm;GO:0005829 cytosol", "go_biological_process": "GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process;GO:0009411 response to UV;GO:0006289 nucleotide-excision repair;GO:0009650 UV protection", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "Q84L33-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8S897-1", "uniprot_id": [ { "id": "BLH5_ARATH", "url": "https://www.uniprot.org/uniprot/Q8S897", "type": "external" } ], "mass": 48818.0, "length": 431, "protein_name": "BEL1-like homeodomain protein 5", "gene_name": "BLH5", "organism": "Arabidopsis", "refseq_name": "BEL1-like homeodomain 5", "refseq_ac": [ { "id": "NP_001318297", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001318297", "type": "external" } ], "gene_names_uniprotkb": "BLH5; BEL1-like homeodomain 5; T22O13.1; T22O13_1", "gene_names_refseq": "BEL1-like homeodomain 5; BLH5; T22O13.1; T22O13_1", "protein_names_uniprotkb": "BEL1-like homeodomain protein 5; BEL1-like protein 5", "protein_names_refseq": "BEL1-like homeodomain 5", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G27220)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "10617197;15120075;15781858;26091701;27862469", "class_list": "", "function": "", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "C0SV62;Q4PSU3", "ec_number_list": [], "go_molecular_function": "GO:0003700 DNA-binding transcription factor activity;GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding;GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific;GO:0003677 DNA binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006357 regulation of transcription by RNA polymerase II", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q8S897-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q5HZ54-1", "uniprot_id": [ { "id": "CFL1_ARATH", "url": "https://www.uniprot.org/uniprot/Q5HZ54", "type": "external" } ], "mass": 21568.0, "length": 189, "protein_name": "Protein CURLY FLAG LEAF 1", "gene_name": "CFL1", "organism": "Arabidopsis", "refseq_name": "ATP-dependent RNA helicase", "refseq_ac": [ { "id": "NP_180909", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_180909", "type": "external" } ], "gene_names_uniprotkb": "CFL1; F4P9.28; F4P9_28", "gene_names_refseq": "F4P9.28; F4P9_28", "protein_names_uniprotkb": "Protein CURLY FLAG LEAF 1; AtCFL1", "protein_names_refseq": "ATP-dependent RNA helicase", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G33510)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "10617197;14593172;21954461;25561503;26745719;27862469", "class_list": "", "function": "Negatively regulates the cuticle development by interacting with the HD-ZIP IV transcription factor HDG1., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O22801;Q84W47", "ec_number_list": [], "go_molecular_function": "GO:0005524 ATP binding;GO:0016787 hydrolase activity;GO:0004386 helicase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005886 plasma membrane", "go_biological_process": "GO:0042335 cuticle development;GO:0160062 cutin-based cuticle development", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q5HZ54-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9SL15-1", "uniprot_id": [ { "id": "GRP3_ARATH", "url": "https://www.uniprot.org/uniprot/Q9SL15", "type": "external" } ], "mass": 14289.0, "length": 145, "protein_name": "Glycine-rich protein 3", "gene_name": "GRP-3; GRP3", "organism": "Arabidopsis", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "GRP-3; GRP3; ATGRP-3; ATGRP3; GLYCINE-RICH PROTEIN 3; GRP3; T20G20.13; T20G20_13; glycine-rich protein 3", "gene_names_refseq": "", "protein_names_uniprotkb": "Glycine-rich protein 3; AtGRP-3", "protein_names_refseq": "", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G05520)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "10617197;11335717;12767910;14593172;19423640;2152168;27862469", "class_list": "", "function": "Regulates the function of the receptor protein kinase WAK1, and namely the phosphorylation of OEE2., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "B3H766;B6EUC6;C0Z2F8;Q2V494;Q2V495;Q41189", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005576 extracellular region;GO:0005739 mitochondrion", "go_biological_process": "GO:0010044 response to aluminum ion;GO:0009826 unidimensional cell growth;GO:0009751 response to salicylic acid;GO:0008361 regulation of cell size;GO:0009269 response to desiccation", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q9SL15-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q5BPS0-1", "uniprot_id": [ { "id": "LOG2_ARATH", "url": "https://www.uniprot.org/uniprot/Q5BPS0", "type": "external" } ], "mass": 23314.0, "length": 213, "protein_name": "Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG2", "gene_name": "LOG2", "organism": "Arabidopsis", "refseq_name": "Putative lysine decarboxylase family protein", "refseq_ac": [ { "id": "NP_181143", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_181143", "type": "external" } ], "gene_names_uniprotkb": "LOG2; F11F19.10; F11F19_10; LONELY GUY 2", "gene_names_refseq": "F11F19.10; F11F19_10; LOG2; LONELY GUY 2", "protein_names_uniprotkb": "Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG2; 3.2.2.n1; Protein LONELY GUY 2", "protein_names_refseq": "Putative lysine decarboxylase family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G35990)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "10617197;17287810;19837870;27862469", "class_list": "", "function": "Cytokinin-activating enzyme working in the direct activation pathway. Phosphoribohydrolase that converts inactive cytokinin nucleotides to the biologically active free-base forms., [UniProtKB, PubMed, UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q6DSS0;Q6DSS1;Q9SJ51", "ec_number_list": [ { "id": "3.2.2.n1", "url": "https://www.rhea-db.org/rhea/?query=ec:3.2.2.n1", "type": "external" } ], "go_molecular_function": "GO:0102682 cytokinin riboside 5'-monophosphate phosphoribohydrolase activity;GO:0016787 hydrolase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005829 cytosol", "go_biological_process": "GO:0009691 cytokinin biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "Q5BPS0-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q682S0-1", "uniprot_id": [ { "id": "RPT2_ARATH", "url": "https://www.uniprot.org/uniprot/Q682S0", "type": "external" } ], "mass": 65854.0, "length": 593, "protein_name": "Root phototropism protein 2", "gene_name": "RPT2", "organism": "Arabidopsis", "refseq_name": "Phototropic-responsive NPH3 family protein", "refseq_ac": [ { "id": "NP_001031446", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001031446", "type": "external" } ], "gene_names_uniprotkb": "RPT2; ROOT PHOTOTROPISM 2; T6B20.13; T6B20.14; T6B20_13", "gene_names_refseq": "AT2G30510; ROOT PHOTOTROPISM 2; RPT2; T6B20.13; T6B20_13", "protein_names_uniprotkb": "Root phototropism protein 2; BTB/POZ domain-containing protein RPT2", "protein_names_refseq": "Phototropic-responsive NPH3 family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G30520)", "pathway_count": 1, "publication_count": 12, "publication_id_list": "10617197;10662859;14593172;15031408;15749712;20202166;23111157;23572148;25561503;26091701;27862469;28011693", "class_list": "", "function": "May act as a substrate-specific adapter of an E3 ubiquitin-protein ligase complex (CUL3-RBX1-BTB) which mediates the ubiquitination and subsequent proteasomal degradation of target proteins (By similarity). Signal transducer of the phototropic response and photo-induced movements. Necessary for root phototropism. Involved in hypocotyl phototropism under high rate but not under low rate light. Regulates stomata opening. Seems to be not involved in chloroplast accumulation and translocation., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 8, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O04343;O04344;Q0WKX4;Q93VA6;Q9M6N8", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005777 peroxisome", "go_biological_process": "GO:0007165 signal transduction;GO:0016567 protein ubiquitination;GO:0009638 phototropism;GO:0009904 chloroplast accumulation movement", "synthesized_glycan_count": 0, "hit_score": 1.3, "record_id": "Q682S0-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8LJT8-1", "uniprot_id": [ { "id": "TKI1_ARATH", "url": "https://www.uniprot.org/uniprot/Q8LJT8", "type": "external" } ], "mass": 82258.0, "length": 743, "protein_name": "TSL-kinase interacting protein 1", "gene_name": "TKI1", "organism": "Arabidopsis", "refseq_name": "TSL-kinase interacting protein 1", "refseq_ac": [ { "id": "NP_001318368", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001318368", "type": "external" } ], "gene_names_uniprotkb": "TKI1; T1J8.14; T1J8_14", "gene_names_refseq": "T1J8.14; T1J8_14; TKI1; TSL-kinase interacting protein 1", "protein_names_uniprotkb": "TSL-kinase interacting protein 1; Myb-related protein TKI1", "protein_names_refseq": "TSL-kinase interacting protein 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G36960)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "10617197;14593172;15047893;19962994;27862469", "class_list": "", "function": "", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q3EBL6;Q8VZJ8;Q9SJL1", "ec_number_list": [], "go_molecular_function": "GO:0003677 DNA binding;GO:0003682 chromatin binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0007389 pattern specification process", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q8LJT8-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q42512-1", "uniprot_id": [ { "id": "CR15A_ARATH", "url": "https://www.uniprot.org/uniprot/Q42512", "type": "external" } ], "mass": 14605.0, "length": 139, "protein_name": "Protein COLD-REGULATED 15A, chloroplastic", "gene_name": "COR15A", "organism": "Arabidopsis", "refseq_name": "cold-regulated 15a", "refseq_ac": [ { "id": "NP_001323750", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001323750", "type": "external" } ], "gene_names_uniprotkb": "COR15A; AtCOR15A; COR15; F14N22.19; F14N22_19; cold-regulated 15a", "gene_names_refseq": "AtCOR15A; COR15A; COR15; F14N22.19; F14N22_19; cold-regulated 15a", "protein_names_uniprotkb": "Protein COLD-REGULATED 15A, chloroplastic; AtCOR15A", "protein_names_refseq": "cold-regulated 15a", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G42540)", "pathway_count": 1, "publication_count": 27, "publication_id_list": "10617197;11038526;11706173;11779861;12148528;12785063;14593172;14745450;15144380;1567390;16258011;16668917;17384167;18540080;19470100;19500304;19563440;20510170;21471455;21673078;21832142;25561503;27862469;8193295;8685269;9668134;9826741", "class_list": "", "function": "Exhibits cryoprotective activity toward stromal substrates (e.g. LDH and rubisco) in chloroplasts and in protoplasts and confers freezing tolerance to plants in a CBF-dependent manner (PubMed:11038526, PubMed:1567390, PubMed:17384167, PubMed:18540080, PubMed:19563440, PubMed:9826741). Protectant against various stresses (e.g. cold, drought and heat stress) by preventing protein aggregation (e.g. LDH) and attenuating enzyme inactivation (PubMed:18540080). Influences the intrinsic curvature of the inner membrane of the chloroplast envelope, and modulates the freeze-induced lamellar-to-hexagonal II phase transitions that occur in regions where the plasma membrane is brought into close apposition with the chloroplast envelope during freeze-induced osmotic contraction (PubMed:9826741). Mediates a shift in the melting curves of phospholipids-containing membranes to lower temperatures (PubMed:20510170). Involved in the regulation of leaf senescence by abscisic acid (ABA) in a VNI2-dependent manner (PubMed:21673078)., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "F4IP48", "ec_number_list": [], "go_molecular_function": "GO:0008289 lipid binding;GO:0005534 galactose binding", "go_cellular_component": "GO:0005829 cytosol;GO:0009507 chloroplast;GO:0009570 chloroplast stroma;GO:0009941 chloroplast envelope", "go_biological_process": "GO:0006970 response to osmotic stress;GO:0009409 response to cold;GO:0051259 protein complex oligomerization;GO:0051260 protein homooligomerization;GO:0050821 protein stabilization", "synthesized_glycan_count": 0, "hit_score": 2.8, "record_id": "Q42512-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q42580-1", "uniprot_id": [ { "id": "PER21_ARATH", "url": "https://www.uniprot.org/uniprot/Q42580", "type": "external" } ], "mass": 36741.0, "length": 327, "protein_name": "Peroxidase 21", "gene_name": "PER21", "organism": "Arabidopsis", "refseq_name": "Peroxidase superfamily protein", "refseq_ac": [ { "id": "NP_181250", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_181250", "type": "external" } ], "gene_names_uniprotkb": "PER21; P21; T2N18.11; T2N18_11", "gene_names_refseq": "T2N18.11; T2N18_11", "protein_names_uniprotkb": "Peroxidase 21; 1.11.1.7; ATP2a/ATP2b; Atperox P21; PRXR5", "protein_names_refseq": "Peroxidase superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G37130)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "10617197;11101835;11118138;11158533;12034502;12068110;14593172;27862469;9132061;9738941", "class_list": "", "function": "Might function as heat shock-like defense protein. May be implicated in the systemic acquired resistance response., [UniProtKB]; Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress. These functions might be dependent on each isozyme/isoform in each plant tissue., [UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 2, "predicted_n_glycosites": 1, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 2, "binding_glycan_count": 0, "secondary_ac_list": "Q43733;Q93YM9", "ec_number_list": [ { "id": "1.11.1.7", "url": "https://www.rhea-db.org/rhea/?query=ec:1.11.1.7", "type": "external" }, { "id": "3.1.3.2", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.2", "type": "external" } ], "go_molecular_function": "GO:0046872 metal ion binding;GO:0020037 heme binding;GO:0004601 peroxidase activity;GO:0140825 lactoperoxidase activity", "go_cellular_component": "GO:0005576 extracellular region;GO:0009505 plant-type cell wall", "go_biological_process": "GO:0006979 response to oxidative stress;GO:0048511 rhythmic process;GO:0006950 response to stress;GO:0042744 hydrogen peroxide catabolic process;GO:0050832 defense response to fungus", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "Q42580-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000011000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9M246-1", "uniprot_id": [ { "id": "TIF3A_ARATH", "url": "https://www.uniprot.org/uniprot/Q9M246", "type": "external" } ], "mass": 25841.0, "length": 238, "protein_name": "Protein TIFY 3A", "gene_name": "JAZ11; TIFY3A", "organism": "Arabidopsis", "refseq_name": "jasmonate-zim-domain protein 11", "refseq_ac": [ { "id": "NP_189930", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_189930", "type": "external" } ], "gene_names_uniprotkb": "JAZ11; TIFY3A; JAZ11; T18D12.10; TIFY3A", "gene_names_refseq": "JAZ11; TIFY3A; jasmonate-zim-domain protein 11", "protein_names_uniprotkb": "Protein TIFY 3A; Jasmonate ZIM domain-containing protein 11", "protein_names_refseq": "jasmonate-zim-domain protein 11", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G43440)", "pathway_count": 1, "publication_count": 12, "publication_id_list": "11130713;17499004;17637675;17675405;18223147;19151223;19309455;20360743;21335373;21447791;21768351;27862469", "class_list": "", "function": "Repressor of jasmonate (JA) responses. Targets MYC2, MYC3 and MYC4 that are JA-dependent transcription activators., [UniProtKB, PubMed, PubMed]; Repressor of jasmonate responses., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006952 defense response;GO:0009611 response to wounding;GO:0031347 regulation of defense response;GO:2000022 regulation of jasmonic acid mediated signaling pathway", "synthesized_glycan_count": 0, "hit_score": 1.3, "record_id": "Q9M246-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8W4K5-1", "uniprot_id": [ { "id": "VAB_ARATH", "url": "https://www.uniprot.org/uniprot/Q8W4K5", "type": "external" } ], "mass": 53335.0, "length": 498, "protein_name": "VAN3-binding protein", "gene_name": "FKD1; VAB", "organism": "Arabidopsis", "refseq_name": "FORKED 1", "refseq_ac": [ { "id": "NP_191889", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_191889", "type": "external" } ], "gene_names_uniprotkb": "FKD1; VAB; F16M2_150; FKD1; FORKED 1; MAA21.9", "gene_names_refseq": "FKD1; FORKED 1; MAA21.9", "protein_names_uniprotkb": "VAN3-binding protein; Protein FORKED 1", "protein_names_refseq": "FORKED 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G63300)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "11130713;14593172;19363154;27862469", "class_list": "", "function": "", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9M1W0", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005634 nucleus;GO:0009507 chloroplast", "go_biological_process": "GO:0006892 post-Golgi vesicle-mediated transport;GO:0010087 phloem or xylem histogenesis;GO:0009733 response to auxin;GO:0009734 auxin-activated signaling pathway;GO:0010305 leaf vascular tissue pattern formation", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "Q8W4K5-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q6ID70-1", "uniprot_id": [ { "id": "P23B_ARATH", "url": "https://www.uniprot.org/uniprot/Q6ID70", "type": "external" } ], "mass": 17366.0, "length": 150, "protein_name": "Co-chaperone protein p23-2", "gene_name": "P23-2", "organism": "Arabidopsis", "refseq_name": "HSP20-like chaperones superfamily protein", "refseq_ac": [ { "id": "NP_001326356", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001326356", "type": "external" } ], "gene_names_uniprotkb": "P23-2; F20H23.30", "gene_names_refseq": "", "protein_names_uniprotkb": "Co-chaperone protein p23-2; Atp23-2", "protein_names_refseq": "HSP20-like chaperones superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G03773)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "11130713;20349287;21735091;26163704;27862469", "class_list": "", "function": "Acts as a co-chaperone for HSP90 (PubMed:20349287). Controls root development through the modulation of auxin distribution in the root meristem (PubMed:26163704)., [UniProtKB, PubMed, PubMed]; Acts as a co-chaperone for HSP90., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q6DSR5", "ec_number_list": [], "go_molecular_function": "GO:0051087 protein-folding chaperone binding;GO:0051879 Hsp90 protein binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005829 cytosol;GO:0101031 protein folding chaperone complex;GO:0009507 chloroplast", "go_biological_process": "GO:0010628 positive regulation of gene expression;GO:0006457 protein folding;GO:0009408 response to heat;GO:0051131 chaperone-mediated protein complex assembly;GO:0010449 root meristem growth", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q6ID70-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8LBI1-1", "uniprot_id": [ { "id": "RL51_ARATH", "url": "https://www.uniprot.org/uniprot/Q8LBI1", "type": "external" } ], "mass": 34358.0, "length": 301, "protein_name": "Large ribosomal subunit protein uL18z", "gene_name": "ATL5; RPL5A", "organism": "Arabidopsis", "refseq_name": "ribosomal protein L5", "refseq_ac": [ { "id": "NP_001327862", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001327862", "type": "external" } ], "gene_names_uniprotkb": "ATL5; RPL5A; AE6; ATL5; MWL2.17; OLI5; OLIGOCELLULA 5; PGY3; PIGGYBACK3; RIBOSOMAL PROTEIN L5 A; RIBOSOMAL PROTEIN L5; RPL5A; ribosomal protein L5", "gene_names_refseq": "ATL5; OLI5; OLIGOCELLULA 5; PGY3; PIGGYBACK3; RIBOSOMAL PROTEIN L5 A; RIBOSOMAL PROTEIN L5; RPL5A; ribosomal protein L5", "protein_names_uniprotkb": "Large ribosomal subunit protein uL18z; 60S ribosomal protein L5-1; Protein ASYMMETRIC LEAVES1/2 ENHANCER 6; Protein OLIGOCELLULA 5; Protein PIGGYBACK 3; Ribosomal protein L5 A", "protein_names_refseq": "ribosomal protein L5", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G25520)", "pathway_count": 1, "publication_count": 15, "publication_id_list": "10819329;11130713;11598216;12711688;14593172;17272265;18305007;18305008;19392710;19423640;25561503;27862469;28154133;36423343;39395807", "class_list": "", "function": "Component of the ribosome, a large ribonucleoprotein complex responsible for the synthesis of proteins in the cell. The small ribosomal subunit (SSU) binds messenger RNAs (mRNAs) and translates the encoded message by selecting cognate aminoacyl-transfer RNA (tRNA) molecules. The large subunit (LSU) contains the ribosomal catalytic site termed the peptidyl transferase center (PTC), which catalyzes the formation of peptide bonds, thereby polymerizing the amino acids delivered by tRNAs into a polypeptide chain. The nascent polypeptides leave the ribosome through a tunnel in the LSU and interact with protein factors that function in enzymatic processing, targeting, and the membrane insertion of nascent chains at the exit of the ribosomal tunnel. Seems involved in the regulation of cell proliferation (PubMed:19392710). Essential in leaf polarity establishment, probably having a role for translation in leaf dorsoventral patterning to specify leaf adaxial identity (PubMed:18305007, PubMed:18305008)., [UniProtKB, PubMed, PubMed, PubMed, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 1, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 1, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 1, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 1, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 0, "biomarker_type": "", "glycan_count": 1, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "B9DHP6;Q940R7", "ec_number_list": [], "go_molecular_function": "GO:0003729 mRNA binding;GO:0008097 5S rRNA binding;GO:0003735 structural constituent of ribosome", "go_cellular_component": "GO:0005634 nucleus;GO:0005654 nucleoplasm;GO:0005730 nucleolus;GO:0005737 cytoplasm;GO:0005829 cytosol", "go_biological_process": "GO:0006913 nucleocytoplasmic transport;GO:0051301 cell division;GO:0006412 translation;GO:0000027 ribosomal large subunit assembly;GO:0009955 adaxial/abaxial pattern specification", "synthesized_glycan_count": 0, "hit_score": 1.8, "record_id": "Q8LBI1-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0100000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q43725-1", "uniprot_id": [ { "id": "CYSKM_ARATH", "url": "https://www.uniprot.org/uniprot/Q43725", "type": "external" } ], "mass": 45815.0, "length": 430, "protein_name": "Cysteine synthase, mitochondrial", "gene_name": "OASC", "organism": "Arabidopsis", "refseq_name": "O-acetylserine (thiol) lyase isoform C", "refseq_ac": [ { "id": "NP_191535", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_191535", "type": "external" } ], "gene_names_uniprotkb": "OASC; ACS 1; ATCS-C; CSASE C; F24G16.30", "gene_names_refseq": "ARABIDOPSIS THALIANA CYSTEINSYNTHASE-C; ATCS-C; CSASE C; O-acetylserine (thiol) lyase isoform C; OASC", "protein_names_uniprotkb": "Cysteine synthase, mitochondrial; 2.5.1.47; 2; ARAth-Bsas2; AtCS-C; Beta-substituted Ala synthase 2; CS-C; CSase C; O-acetylserine (thiol)-lyase; O-acetylserine sulfhydrylase; OAS-TL C", "protein_names_refseq": "O-acetylserine (thiol) lyase isoform C", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G59760)", "pathway_count": 1, "publication_count": 19, "publication_id_list": "10319184;10889265;10940562;11130713;14593172;14671022;15258168;16307301;18024555;18223034;18801369;20658158;20720017;22511607;22730323;23602110;25732537;27862469;29654922", "class_list": "", "function": "Acts as a cysteine synthase. Plays a role in the sulfide detoxification in mitochondria., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 2, "predicted_n_glycosites": 0, "predicted_o_glycosites": 2, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 2, "binding_glycan_count": 0, "secondary_ac_list": "Q8L4A2;Q9M1Z8;Q9M440", "ec_number_list": [ { "id": "4.4.1.1", "url": "https://www.rhea-db.org/rhea/?query=ec:4.4.1.1", "type": "external" }, { "id": "2.5.1.47", "url": "https://www.rhea-db.org/rhea/?query=ec:2.5.1.47", "type": "external" }, { "id": "4.4.1.9", "url": "https://www.rhea-db.org/rhea/?query=ec:4.4.1.9", "type": "external" } ], "go_molecular_function": "GO:0005524 ATP binding;GO:0008270 zinc ion binding;GO:0042802 identical protein binding;GO:0004124 cysteine synthase activity;GO:0016829 lyase activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005739 mitochondrion;GO:0005829 cytosol;GO:0009507 chloroplast;GO:0009570 chloroplast stroma", "go_biological_process": "GO:0006535 cysteine biosynthetic process from serine;GO:0019344 cysteine biosynthetic process;GO:0009567 double fertilization forming a zygote and endosperm;GO:0009860 pollen tube growth;GO:0048868 pollen tube development", "synthesized_glycan_count": 0, "hit_score": 2.0, "record_id": "Q43725-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000001001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8RY65-1", "uniprot_id": [ { "id": "CIK6_ARATH", "url": "https://www.uniprot.org/uniprot/Q8RY65", "type": "external" } ], "mass": 70606.0, "length": 635, "protein_name": "Protein CLAVATA3 INSENSITIVE RECEPTOR KINASE 6", "gene_name": "CIK6; NIK2", "organism": "Arabidopsis", "refseq_name": "NSP-interacting kinase 2", "refseq_ac": [ { "id": "NP_189183", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_189183", "type": "external" } ], "gene_names_uniprotkb": "CIK6; NIK2; AtNIK2; MWL2.18; NIK2; NSP-interacting kinase 2", "gene_names_refseq": "AtNIK2; NIK2; NSP-interacting kinase 2", "protein_names_uniprotkb": "Protein CLAVATA3 INSENSITIVE RECEPTOR KINASE 6; 2.7.11.1; AtNIK2; LRR receptor-like serine/threonine-protein kinase NIK2; Protein NSP-INTERACTING KINASE 2", "protein_names_refseq": "NSP-interacting kinase 2", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G25560)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "10819329;11130713;14593172;15489295;18789471;20064227;23111157;27862469;29789310;34651321", "class_list": "", "function": "Receptor kinase acting, redundantly with other CIKs (e.g. CIK1, CIK2, CIK3, CIK5 and CIK6), as a coreceptor of CLV1, CLV2/CRN and RPK2, and required for CLAVATA-family peptides (e.g. CLV3, CLE25, CLE26 and CLE45) signaling through phosphorylation; this signaling regulates protophloem differentiation and the maintenance of shoot apical meristem (SAM) and root apical meristem (RAM) homeostasis, and acts down-stream of BRX and OPS (PubMed:29789310, PubMed:34651321). Phosphorylates RPL10A in vitro (PubMed:18789471). Involved in defense response to geminivirus infection (By similarity)., [UniProtKB, PubMed, UniProtKB, PubMed, PubMed]", "predicted_glycosites": 9, "predicted_n_glycosites": 9, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 16, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 9, "binding_glycan_count": 0, "secondary_ac_list": "Q9LSU7", "ec_number_list": [ { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.3.2.27", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.2.27", "type": "external" }, { "id": "2.7.10.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.-", "type": "external" }, { "id": "3.1.4.46", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.4.46", "type": "external" }, { "id": "2.7.11.25", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.25", "type": "external" }, { "id": "2.7.11.22", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.22", "type": "external" }, { "id": "2.7.10.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.1", "type": "external" }, { "id": "2.7.11.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.-", "type": "external" }, { "id": "2.7.11.24", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.24", "type": "external" }, { "id": "2.7.12.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.1", "type": "external" }, { "id": "2.7.11.23", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.23", "type": "external" }, { "id": "2.7.12.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.2", "type": "external" }, { "id": "2.7.-.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.-.-", "type": "external" }, { "id": "3.1.26.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.26.-", "type": "external" }, { "id": "3.1.3.16", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.16", "type": "external" }, { "id": "2.7.11.34", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.34", "type": "external" }, { "id": "4.6.1.2", "url": "https://www.rhea-db.org/rhea/?query=ec:4.6.1.2", "type": "external" } ], "go_molecular_function": "GO:0005524 ATP binding;GO:0004675 transmembrane receptor protein serine/threonine kinase activity;GO:0106310 protein serine kinase activity;GO:0004674 protein serine/threonine kinase activity", "go_cellular_component": "GO:0005886 plasma membrane;GO:0016020 membrane", "go_biological_process": "GO:0006952 defense response;GO:0007165 signal transduction;GO:0035556 intracellular signal transduction;GO:1901653 cellular response to peptide;GO:0048638 regulation of developmental growth", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "Q8RY65-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000010001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q43349-1", "uniprot_id": [ { "id": "CP29A_ARATH", "url": "https://www.uniprot.org/uniprot/Q43349", "type": "external" } ], "mass": 36007.0, "length": 342, "protein_name": "29 kDa ribonucleoprotein, chloroplastic", "gene_name": "CP29A; CP29", "organism": "Arabidopsis", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "CP29A; CP29; F4P12_160; RBP29", "gene_names_refseq": "", "protein_names_uniprotkb": "29 kDa ribonucleoprotein, chloroplastic; RNA-binding protein CP29A; RNA-binding protein cp29", "protein_names_refseq": "", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G53460)", "pathway_count": 1, "publication_count": 11, "publication_id_list": "11130713;14593172;19376835;21768351;22440515;23110894;25561503;27862469;28011693;29654922;7894017", "class_list": "", "function": "Stabilizes specific chloroplast mRNAs. Required for normal chloroplast development under cold stress conditions by stabilizing transcripts of numerous mRNAs under these conditions., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 10, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q94BT1;Q9LFH2", "ec_number_list": [], "go_molecular_function": "GO:0003723 RNA binding;GO:0003729 mRNA binding;GO:0008266 poly(U) RNA binding", "go_cellular_component": "GO:0005829 cytosol;GO:1990904 ribonucleoprotein complex;GO:0009507 chloroplast;GO:0009534 chloroplast thylakoid;GO:0009570 chloroplast stroma", "go_biological_process": "GO:0006396 RNA processing;GO:0006397 mRNA processing;GO:0009409 response to cold;GO:0048255 mRNA stabilization;GO:0008380 RNA splicing", "synthesized_glycan_count": 0, "hit_score": 1.2, "record_id": "Q43349-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9LEX0-1", "uniprot_id": [ { "id": "P2A13_ARATH", "url": "https://www.uniprot.org/uniprot/Q9LEX0", "type": "external" } ], "mass": 33115.0, "length": 290, "protein_name": "F-box protein PP2-A13", "gene_name": "PP2-A13; PP2A13", "organism": "Arabidopsis", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "PP2-A13; PP2A13; AtPP2-A13; SKIP9; T27I15.150; phloem protein 2-A13", "gene_names_refseq": "", "protein_names_uniprotkb": "F-box protein PP2-A13; AtPP2-A13; Protein PHLOEM PROTEIN 2-LIKE A13; SKP1-interacting partner 9", "protein_names_refseq": "", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G61060)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "11130713;12169662;12529520;12795696;14593172;27862469", "class_list": "", "function": "Component of SCF(ASK-cullin-F-box) E3 ubiquitin ligase complexes, which may mediate the ubiquitination and subsequent proteasomal degradation of target proteins., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q3EAG4;Q94CC2", "ec_number_list": [], "go_molecular_function": "GO:0030246 carbohydrate binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0009611 response to wounding;GO:0016567 protein ubiquitination;GO:1900056 negative regulation of leaf senescence", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q9LEX0-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q42592-1", "uniprot_id": [ { "id": "APXS_ARATH", "url": "https://www.uniprot.org/uniprot/Q42592", "type": "external" } ], "mass": 40407.0, "length": 372, "protein_name": "L-ascorbate peroxidase S, chloroplastic/mitochondrial", "gene_name": "APXS; SAPX", "organism": "Arabidopsis", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "APXS; SAPX; STROMAL ASCORBATE PEROXIDASE; T28D5.80; T28D5_80; stromal ascorbate peroxidase", "gene_names_refseq": "", "protein_names_uniprotkb": "L-ascorbate peroxidase S, chloroplastic/mitochondrial; 1.11.1.11; AtAPx05; Stromal ascorbate peroxidase; sAPX", "protein_names_refseq": "", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G08390)", "pathway_count": 1, "publication_count": 12, "publication_id_list": "10617198;12954611;14593172;20466843;22329444;23111157;23776212;25561503;25732537;27862469;30833711;9291097", "class_list": "", "function": "Plays a key role in hydrogen peroxide removal., [UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9STM9", "ec_number_list": [ { "id": "1.11.1.11", "url": "https://www.rhea-db.org/rhea/?query=ec:1.11.1.11", "type": "external" } ], "go_molecular_function": "GO:0046872 metal ion binding;GO:0020037 heme binding;GO:0004601 peroxidase activity;GO:0016688 L-ascorbate peroxidase activity", "go_cellular_component": "GO:0005739 mitochondrion;GO:0005829 cytosol;GO:0009507 chloroplast;GO:0009570 chloroplast stroma", "go_biological_process": "GO:0034599 cellular response to oxidative stress;GO:0000302 response to reactive oxygen species;GO:0042744 hydrogen peroxide catabolic process", "synthesized_glycan_count": 0, "hit_score": 1.3, "record_id": "Q42592-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8S944-1", "uniprot_id": [ { "id": "DRP3A_ARATH", "url": "https://www.uniprot.org/uniprot/Q8S944", "type": "external" } ], "mass": 89627.0, "length": 808, "protein_name": "Dynamin-related protein 3A", "gene_name": "DRP3A", "organism": "Arabidopsis", "refseq_name": "dynamin-related protein 3A", "refseq_ac": [ { "id": "NP_567931", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_567931", "type": "external" } ], "gene_names_uniprotkb": "DRP3A; ADL2A; ADL2; APEM1; ARABIDOPSIS DYNAMIN-LIKE 2; NOXY15; T16L1.140; T16L1_140; dynamin-related protein 3A; non responding to oxylipins 15", "gene_names_refseq": "ABERRANT PEROXISOME MORPHOLOGY 1; ADL2A; ADL2; APEM1; ARABIDOPSIS DYNAMIN-LIKE 2; DRP3A; NOXY15; T16L1.140; T16L1_140; dynamin-related protein 3A; non responding to oxylipins 15", "protein_names_uniprotkb": "Dynamin-related protein 3A; Dynamin-like protein 2a; Dynamin-like protein 2", "protein_names_refseq": "dynamin-related protein 3A", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G33650)", "pathway_count": 1, "publication_count": 19, "publication_id_list": "10617198;11960028;14593172;14750516;14754924;14988495;18463617;18539750;18559960;18785999;20179140;20466843;23111157;23328941;23572148;27862469;29167316;29654922;9747851", "class_list": "", "function": "Involved in the control of mitochondrial and peroxisomal division and morphology. In association with PEX11C, PEX11D, PEX11E and FIS1B, is involved in cell cycle-associated constitutive self-replication of preexisting peroxisomes., [UniProtKB, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 2, "predicted_n_glycosites": 0, "predicted_o_glycosites": 2, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 6, "reported_mutagensis": 2, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 2, "binding_glycan_count": 0, "secondary_ac_list": "O22403;O81882;Q94CF3", "ec_number_list": [], "go_molecular_function": "GO:0003924 GTPase activity;GO:0005525 GTP binding;GO:0008017 microtubule binding;GO:0042802 identical protein binding;GO:0035091 phosphatidylinositol binding", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005739 mitochondrion;GO:0005777 peroxisome;GO:0005829 cytosol;GO:0005874 microtubule", "go_biological_process": "GO:0016559 peroxisome fission;GO:0051301 cell division;GO:0044375 regulation of peroxisome size;GO:0007031 peroxisome organization", "synthesized_glycan_count": 0, "hit_score": 2.0, "record_id": "Q8S944-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000001001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8W5B1-1", "uniprot_id": [ { "id": "VRN2_ARATH", "url": "https://www.uniprot.org/uniprot/Q8W5B1", "type": "external" } ], "mass": 50624.0, "length": 440, "protein_name": "Polycomb group protein VERNALIZATION 2", "gene_name": "VRN2", "organism": "Arabidopsis", "refseq_name": "VEFS-Box of polycomb protein", "refseq_ac": [ { "id": "NP_567517", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_567517", "type": "external" } ], "gene_names_uniprotkb": "VRN2; FCAALL.23; dl4450w", "gene_names_refseq": "REDUCED VERNALIZATION RESPONSE 2; VRN2", "protein_names_uniprotkb": "Polycomb group protein VERNALIZATION 2", "protein_names_refseq": "VEFS-Box of polycomb protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G16845)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "10617198;11719192;14593172;18854416;26642436;27862469;9461215", "class_list": "", "function": "Polycomb group (PcG) protein. Plays a central role in vernalization by maintaining repressed the homeotic gene FLC, a floral repressor, after a cold treatment. PcG proteins act by forming multiprotein complexes, which are required to maintain the transcriptionally repressive state of homeotic genes throughout development. PcG proteins are not required to initiate repression, but to maintain it during later stages of development. They probably act via the methylation of histones, rendering chromatin heritably changed in its expressibility. Associates constitutively along the whole FLC locus., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O23524;O23525;Q8W5B2;Q94CF5", "ec_number_list": [], "go_molecular_function": "GO:0003700 DNA-binding transcription factor activity;GO:0008270 zinc ion binding;GO:0031490 chromatin DNA binding;GO:0001222 transcription corepressor binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005677 chromatin silencing complex", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0009409 response to cold;GO:0010048 vernalization response;GO:0141044 epigenetic programming in the endosperm", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q8W5B1-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q43731-1", "uniprot_id": [ { "id": "PER50_ARATH", "url": "https://www.uniprot.org/uniprot/Q43731", "type": "external" } ], "mass": 36076.0, "length": 329, "protein_name": "Peroxidase 50", "gene_name": "PER50", "organism": "Arabidopsis", "refseq_name": "Peroxidase superfamily protein", "refseq_ac": [ { "id": "NP_195468", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_195468", "type": "external" } ], "gene_names_uniprotkb": "PER50; F19F18.10; F19F18_10; F6G17.9; P50", "gene_names_refseq": "F19F18.10; F19F18_10", "protein_names_uniprotkb": "Peroxidase 50; 1.11.1.7; ATP9a; Atperox P50; PRXR2", "protein_names_refseq": "Peroxidase superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G37520)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "10617198;11027363;11158533;12034502;14593172;27862469;9738941;9838086", "class_list": "", "function": "Exhibits a Ca(2+)-pectate binding affinity which could be interpreted in vivo as a specificity to interact with the pectic structure of the cell wall., [UniProtKB]; Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress. These functions might be dependent on each isozyme/isoform in each plant tissue., [UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 1, "predicted_n_glycosites": 1, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "Q96523;Q9SBA1", "ec_number_list": [ { "id": "1.11.1.7", "url": "https://www.rhea-db.org/rhea/?query=ec:1.11.1.7", "type": "external" }, { "id": "3.1.3.2", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.2", "type": "external" } ], "go_molecular_function": "GO:0046872 metal ion binding;GO:0020037 heme binding;GO:0140825 lactoperoxidase activity", "go_cellular_component": "GO:0005576 extracellular region;GO:0005737 cytoplasm;GO:0005773 vacuole", "go_biological_process": "GO:0006979 response to oxidative stress;GO:0048511 rhythmic process;GO:0042744 hydrogen peroxide catabolic process", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "Q43731-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000010001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8GY88-1", "uniprot_id": [ { "id": "SK2_ARATH", "url": "https://www.uniprot.org/uniprot/Q8GY88", "type": "external" } ], "mass": 33777.0, "length": 300, "protein_name": "Shikimate kinase 2, chloroplastic", "gene_name": "SK2", "organism": "Arabidopsis", "refseq_name": "shikimate kinase 2", "refseq_ac": [ { "id": "NP_195664", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_195664", "type": "external" } ], "gene_names_uniprotkb": "SK2; ATSK2; F23K16.170; F23K16_170; shikimate kinase 2", "gene_names_refseq": "ATSK2; F23K16.170; F23K16_170; SK2; shikimate kinase 2", "protein_names_uniprotkb": "Shikimate kinase 2, chloroplastic; 2.7.1.71; AtSK2", "protein_names_refseq": "shikimate kinase 2", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G39540)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "10617198;11910074;14593172;19057671;21520319;27862469", "class_list": "", "function": "Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate., [UniProtKB, PubMed, PubMed, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9SVA4", "ec_number_list": [ { "id": "2.7.1.71", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.71", "type": "external" } ], "go_molecular_function": "GO:0005524 ATP binding;GO:0046872 metal ion binding;GO:0004765 shikimate kinase activity", "go_cellular_component": "GO:0009507 chloroplast", "go_biological_process": "GO:0008652 amino acid biosynthetic process;GO:0009073 aromatic amino acid family biosynthetic process;GO:0009423 chorismate biosynthetic process;GO:0019632 shikimate metabolic process", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q8GY88-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q56XG6-1", "uniprot_id": [ { "id": "RH15_ARATH", "url": "https://www.uniprot.org/uniprot/Q56XG6", "type": "external" } ], "mass": 48337.0, "length": 427, "protein_name": "DEAD-box ATP-dependent RNA helicase 15", "gene_name": "RH15; UAP56A", "organism": "Arabidopsis", "refseq_name": "DEAD/DEAH box RNA helicase family protein", "refseq_ac": [ { "id": "NP_568244", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_568244", "type": "external" } ], "gene_names_uniprotkb": "RH15; UAP56A; F2I11.60; F2I11_60; UAP56A; UAP56a; homolog of human UAP56 a", "gene_names_refseq": "F2I11.60; F2I11_60; UAP56a; homolog of human UAP56 a", "protein_names_uniprotkb": "DEAD-box ATP-dependent RNA helicase 15; 3.6.4.13; UAP56 homolog A", "protein_names_refseq": "DEAD/DEAH box RNA helicase family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G11170); (ath:AT5G11200)", "pathway_count": 2, "publication_count": 14, "publication_id_list": "11130714;14593172;17168887;19423640;20466843;22499202;23111157;23328941;23555998;23776212;24265739;25561503;27862469;9862990", "class_list": "", "function": "ATP-dependent RNA helicase involved in pre-mRNA splicing. Required for the export of mRNA out of the nucleus. In addition to ssRNA and dsRNA, binds dsDNA, but not ssDNA., [UniProtKB, PubMed, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 4, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "C0Z3C4;Q0WWC6;Q3E9I7;Q56YP8;Q93VJ8;Q9LFN9;Q9ZS06", "ec_number_list": [ { "id": "3.1.-.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.-.-", "type": "external" }, { "id": "5.6.2.3", "url": "https://www.rhea-db.org/rhea/?query=ec:5.6.2.3", "type": "external" }, { "id": "3.6.4.12", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.4.12", "type": "external" }, { "id": "3.6.-.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.-.-", "type": "external" }, { "id": "2.7.7.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.7.-", "type": "external" }, { "id": "3.6.4.13", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.4.13", "type": "external" }, { "id": "5.6.2.4", "url": "https://www.rhea-db.org/rhea/?query=ec:5.6.2.4", "type": "external" }, { "id": "5.6.2.-", "url": "https://www.rhea-db.org/rhea/?query=ec:5.6.2.-", "type": "external" }, { "id": "3.6.1.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.1.-", "type": "external" }, { "id": "3.6.4.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.4.-", "type": "external" }, { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.7.4.3", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.4.3", "type": "external" }, { "id": "5.6.2.5", "url": "https://www.rhea-db.org/rhea/?query=ec:5.6.2.5", "type": "external" }, { "id": "7.2.2.-", "url": "https://www.rhea-db.org/rhea/?query=ec:7.2.2.-", "type": "external" }, { "id": "3.6.4.6", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.4.6", "type": "external" }, { "id": "3.6.1.25", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.1.25", "type": "external" } ], "go_molecular_function": "GO:0003729 mRNA binding;GO:0005524 ATP binding;GO:0016887 ATP hydrolysis activity;GO:0003690 double-stranded DNA binding;GO:0003725 double-stranded RNA binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005730 nucleolus;GO:0005829 cytosol;GO:0009506 plasmodesma", "go_biological_process": "GO:0006397 mRNA processing;GO:0046686 response to cadmium ion;GO:0008380 RNA splicing;GO:0051028 mRNA transport;GO:0010099 regulation of photomorphogenesis", "synthesized_glycan_count": 0, "hit_score": 1.5, "record_id": "Q56XG6-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9ZSK4-1", "uniprot_id": [ { "id": "ADF3_ARATH", "url": "https://www.uniprot.org/uniprot/Q9ZSK4", "type": "external" } ], "mass": 15922.0, "length": 139, "protein_name": "Actin-depolymerizing factor 3", "gene_name": "ADF3", "organism": "Arabidopsis", "refseq_name": "actin depolymerizing factor 3", "refseq_ac": [ { "id": "NP_851227", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_851227", "type": "external" } ], "gene_names_uniprotkb": "ADF3; ACTIN DEPOLYMERIZING FACTOR 3; MMN10.12; MMN10.4; MMN10_4; actin depolymerizing factor 3", "gene_names_refseq": "ACTIN DEPOLYMERIZING FACTOR 3; ADF3; MMN10.4; MMN10_4; actin depolymerizing factor 3", "protein_names_uniprotkb": "Actin-depolymerizing factor 3; ADF-3; AtADF3", "protein_names_refseq": "actin depolymerizing factor 3", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G59880)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "11130714;11414611;14593172;16360805;19794115;23111157;27862469;9872454", "class_list": "", "function": "Actin-depolymerizing protein. Severs actin filaments (F-actin) and binds to actin monomers., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 3, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0051015 actin filament binding;GO:0003779 actin binding", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005739 mitochondrion;GO:0005829 cytosol;GO:0005886 plasma membrane;GO:0015629 actin cytoskeleton", "go_biological_process": "GO:0030042 actin filament depolymerization", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "Q9ZSK4-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q6S5G3-1", "uniprot_id": [ { "id": "TOC90_ARATH", "url": "https://www.uniprot.org/uniprot/Q6S5G3", "type": "external" } ], "mass": 89329.0, "length": 793, "protein_name": "Translocase of chloroplast 90, chloroplastic", "gene_name": "TOC90", "organism": "Arabidopsis", "refseq_name": "Avirulence induced gene (AIG1) family protein", "refseq_ac": [ { "id": "NP_001031911", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001031911", "type": "external" } ], "gene_names_uniprotkb": "TOC90; F5O24.190; F5O24_190; PPI4; Toc90", "gene_names_refseq": "F5O24.190; F5O24_190; Toc90; translocon at the outer envelope membrane of chloroplasts 90", "protein_names_uniprotkb": "Translocase of chloroplast 90, chloroplastic; 3.6.5.-; 90 kDa chloroplast outer envelope protein; AtToc90; Plastid protein import 4", "protein_names_refseq": "Avirulence induced gene (AIG1) family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G20300)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "11130714;15273297;15284497;25561503;27862469", "class_list": "", "function": "GTPase involved in protein precursor import into chloroplasts. Seems to recognize chloroplast-destined precursor proteins and regulate their presentation to the translocation channel through GTP hydrolysis. Probably specialized in the import of nuclear encoded photosynthetic preproteins from the cytoplasm to the chloroplast., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q2V361", "ec_number_list": [], "go_molecular_function": "GO:0003924 GTPase activity;GO:0005525 GTP binding;GO:0046872 metal ion binding;GO:0016787 hydrolase activity", "go_cellular_component": "GO:0005739 mitochondrion;GO:0009507 chloroplast;GO:0009707 chloroplast outer membrane", "go_biological_process": "GO:0045036 protein targeting to chloroplast;GO:0045037 protein import into chloroplast stroma;GO:0015031 protein transport", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q6S5G3-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9FMT1-1", "uniprot_id": [ { "id": "LEU31_ARATH", "url": "https://www.uniprot.org/uniprot/Q9FMT1", "type": "external" } ], "mass": 44162.0, "length": 409, "protein_name": "3-isopropylmalate dehydrogenase 1, chloroplastic", "gene_name": "IMD1; IMDH1", "organism": "Arabidopsis", "refseq_name": "isopropylmalate dehydrogenase 1", "refseq_ac": [ { "id": "NP_196924", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_196924", "type": "external" } ], "gene_names_uniprotkb": "IMD1; IMDH1; ATIMD1; IMD1; IPMDH1; MAM-D1; MUA22.20; MUA22_20", "gene_names_refseq": "ARABIDOPSIS ISOPROPYLMALATE DEHYDROGENASE 1; ATIMD1; IMD1; MUA22.20; MUA22_20; isopropylmalate dehydrogenase 1", "protein_names_uniprotkb": "3-isopropylmalate dehydrogenase 1, chloroplastic; 1.1.1.85; 3-IPM-DH 1; AtIMD1; AtIMDH1; Beta-IPM dehydrogenase 1; IMDH 1; Isopropylmalate dehydrogenase 1; Methylthioalkylmalate dehydrogenase 1", "protein_names_refseq": "isopropylmalate dehydrogenase 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G14200)", "pathway_count": 1, "publication_count": 19, "publication_id_list": "11130714;14593172;15849421;19376835;19493961;19674406;20840499;21697089;21768351;22438062;22440515;23111157;23572148;23660473;23776212;23820729;25561503;27862469;9501997", "class_list": "", "function": "Involved in both glucosinolate and leucine biosynthesis; catalyzes the oxidative decarboxylation step in both leucine biosynthesis (primary metabolism) and methionine chain elongation of glucosinolates (specialized metabolism) (PubMed:19493961, PubMed:19674406, PubMed:21697089). Catalyzes the oxidation of 3-carboxy-2-hydroxy-4-methylpentanoate (3-isopropylmalate, 3-IPM) to 3-carboxy-4-methyl-2-oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate (PubMed:15849421, PubMed:20840499). Required during pollen development and involved in embryo sac development (PubMed:20840499). More active on 3-isopropylmalate and NAD(+) than towards D-malate (PubMed:19674406)., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 4, "reported_mutagensis": 3, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q8VXU4", "ec_number_list": [ { "id": "1.1.1.85", "url": "https://www.rhea-db.org/rhea/?query=ec:1.1.1.85", "type": "external" } ], "go_molecular_function": "GO:0000287 magnesium ion binding;GO:0051287 NAD binding;GO:0003862 3-isopropylmalate dehydrogenase activity;GO:0046872 metal ion binding", "go_cellular_component": "GO:0005829 cytosol;GO:0009507 chloroplast;GO:0009536 plastid;GO:0009570 chloroplast stroma", "go_biological_process": "GO:0009611 response to wounding;GO:0009098 L-leucine biosynthetic process;GO:0009553 embryo sac development;GO:0009555 pollen development;GO:0009753 response to jasmonic acid", "synthesized_glycan_count": 0, "hit_score": 2.0, "record_id": "Q9FMT1-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q5YDB5-1", "uniprot_id": [ { "id": "CPL2_ARATH", "url": "https://www.uniprot.org/uniprot/Q5YDB5", "type": "external" } ], "mass": 85953.0, "length": 770, "protein_name": "RNA polymerase II C-terminal domain phosphatase-like 2", "gene_name": "CPL2", "organism": "Arabidopsis", "refseq_name": "carboxyl-terminal domain (ctd) phosphatase-like 2", "refseq_ac": [ { "id": "NP_195747", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_195747", "type": "external" } ], "gene_names_uniprotkb": "CPL2; AIPP4; ATCPL2; F7J8.250; F7J8_250", "gene_names_refseq": "ATCPL2; CPL2; F7J8.250; F7J8_250; carboxyl-terminal domain (ctd) phosphatase-like 2", "protein_names_uniprotkb": "RNA polymerase II C-terminal domain phosphatase-like 2; 3.1.3.16; ASI1-immunoprecipitated protein 4; AtCPL2; CTD phosphatase-like 2; Carboxyl-terminal phosphatase-like 2; FCP-like 2", "protein_names_refseq": "carboxyl-terminal domain (ctd) phosphatase-like 2", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G01270)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "11130714;15388846;18156295;18506580;26512101;27862469;28808009;33277495;33433058", "class_list": "", "function": "Processively dephosphorylates 'Ser-5' but not 'Ser-2' of the heptad repeats YSPTSPS in the C-terminal domain of the largest RNA polymerase II subunit (RPB1). This promotes the activity of RNA polymerase II. Together with CPL1, required for male gametes fertility. Multifunctional regulator that modulates plant growth, stress, and phytohormones responses. Positive transcription regulator of genes involved in high salinity resistance and auxin mediated signaling pathway. Prevents the accumulation of intronic heterochromatin-containing genes (e.g. IBM1, At3g05410 and RPP7) (PubMed:28808009). Recruited at histone H3 lysine 27 trimethylation (H3K27me3) marks and low-methylated H3K4 by the BAH-PHD bivalent histone reader complex to form a BAH-PHD-CPL2 complex (BPC) in order to silence several H3K27me3 and low-methylated H3K4 enriched loci, including AGO5, via the phosphorylation state-dependent inhibition of Pol II release from the transcriptional start site (e.g. Ser5P-Pol II dephosphorylation) (PubMed:33277495). The BPC complex represses flowering by inhibiting the expression of several genes, including AGL6, FT, FUL and SOC1 (PubMed:33277495)., [UniProtKB, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "F4K803;Q9LFA9", "ec_number_list": [ { "id": "3.1.3.16", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.16", "type": "external" }, { "id": "3.1.3.27", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.27", "type": "external" }, { "id": "3.1.3.48", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.48", "type": "external" }, { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.7.13.3", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.13.3", "type": "external" } ], "go_molecular_function": "GO:0003723 RNA binding;GO:0046872 metal ion binding;GO:0004722 protein serine/threonine phosphatase activity;GO:0016791 phosphatase activity;GO:0008420 RNA polymerase II CTD heptapeptide repeat phosphatase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006970 response to osmotic stress;GO:0048589 developmental growth;GO:0010468 regulation of gene expression;GO:0045814 negative regulation of gene expression, epigenetic", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "Q5YDB5-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9LU68-1", "uniprot_id": [ { "id": "CIA2_ARATH", "url": "https://www.uniprot.org/uniprot/Q9LU68", "type": "external" } ], "mass": 48410.0, "length": 435, "protein_name": "Protein CHLOROPLAST IMPORT APPARATUS 2", "gene_name": "CIA2", "organism": "Arabidopsis", "refseq_name": "chloroplast import apparatus 2", "refseq_ac": [ { "id": "NP_001032087", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001032087", "type": "external" } ], "gene_names_uniprotkb": "CIA2; MUL3.13; MUL3_13; chloroplast import apparatus 2", "gene_names_refseq": "CIA2; MUL3.13; MUL3_13; chloroplast import apparatus 2", "protein_names_uniprotkb": "Protein CHLOROPLAST IMPORT APPARATUS 2", "protein_names_refseq": "chloroplast import apparatus 2", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G57180)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "10718197;11130714;11549763;14593172;19386807;19423640;20466843;24924143;27862469", "class_list": "", "function": "Responsible for specific up-regulation of the translocon genes TOC33 and TOC75 in leaves. Involved in the general chloroplast protein import pathway regulation, including protein import and protein translation efficiencies., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 5, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "Q56Y02;Q94JU7", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005634 nucleus;GO:0009507 chloroplast", "go_biological_process": "GO:0006355 regulation of DNA-templated transcription;GO:0045036 protein targeting to chloroplast", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "Q9LU68-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000001001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q6IDA6-1", "uniprot_id": [ { "id": "LOT1_ARATH", "url": "https://www.uniprot.org/uniprot/Q6IDA6", "type": "external" } ], "mass": 17553.0, "length": 162, "protein_name": "Protein LOWER TEMPERATURE 1", "gene_name": "LOT1", "organism": "Arabidopsis", "refseq_name": "SAP domain-containing protein", "refseq_ac": [ { "id": "NP_201151", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_201151", "type": "external" } ], "gene_names_uniprotkb": "LOT1; MLE2.9; MLE2_9", "gene_names_refseq": "MLE2.9; MLE2_9", "protein_names_uniprotkb": "Protein LOWER TEMPERATURE 1", "protein_names_refseq": "SAP domain-containing protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G63460)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "11130714;27862469;31102784;9501997", "class_list": "", "function": "Supports abscisic acid (ABA) responses and drought tolerance by regulating the dynamic localization and stability (preventing degradation by the proteasome) of CAR proteins (C2-domain ABA-related, e.g. CAR9)., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "F4KAQ0;Q9FMV6", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005634 nucleus;GO:0009507 chloroplast;GO:0080008 Cul4-RING E3 ubiquitin ligase complex", "go_biological_process": "GO:0031647 regulation of protein stability;GO:0009414 response to water deprivation;GO:0032434 regulation of proteasomal ubiquitin-dependent protein catabolic process;GO:0009737 response to abscisic acid;GO:0009738 abscisic acid-activated signaling pathway", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "Q6IDA6-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q42533-1", "uniprot_id": [ { "id": "BCCP1_ARATH", "url": "https://www.uniprot.org/uniprot/Q42533", "type": "external" } ], "mass": 29613.0, "length": 280, "protein_name": "Biotin carboxyl carrier protein of acetyl-CoA carboxylase 1, chloroplastic", "gene_name": "BCCP1; CAC1", "organism": "Arabidopsis", "refseq_name": "chloroplastic acetylcoenzyme A carboxylase 1", "refseq_ac": [ { "id": "NP_197143", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_197143", "type": "external" } ], "gene_names_uniprotkb": "BCCP1; CAC1; BCCP-1; BCCP1; BCCP; CAC1-A; CAC1A; CAC1; MQK4.12; MQK4_12", "gene_names_refseq": "BCCP-1; BCCP1; BCCP; BIOTIN CARBOXYL CARRIER PROTEIN; BIOTIN CARBOXYL-CARRIER PROTEIN 1; BIOTIN CARBOXYL-CARRIER PROTEIN; CAC1-A; CAC1A; CAC1; MQK4.12; MQK4_12; chloroplastic acetylcoenzyme A carboxylase 1", "protein_names_uniprotkb": "Biotin carboxyl carrier protein of acetyl-CoA carboxylase 1, chloroplastic; AtBCCP1; BCCP-1", "protein_names_refseq": "chloroplastic acetylcoenzyme A carboxylase 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G16390)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "10759501;11130714;11299381;14593172;18431481;27862469;28011693;7480350;9046589;9330910", "class_list": "", "function": "This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA., [UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 2, "predicted_n_glycosites": 0, "predicted_o_glycosites": 2, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 2, "binding_glycan_count": 0, "secondary_ac_list": "O04845;Q9LL78", "ec_number_list": [], "go_molecular_function": "GO:0003989 acetyl-CoA carboxylase activity;GO:0009374 biotin binding", "go_cellular_component": "GO:0009317 acetyl-CoA carboxylase complex;GO:0009507 chloroplast;GO:0009536 plastid;GO:0009570 chloroplast stroma;GO:0009941 chloroplast envelope", "go_biological_process": "GO:0006633 fatty acid biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "Q42533-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000001001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q41220-1", "uniprot_id": [ { "id": "SAU15_ARATH", "url": "https://www.uniprot.org/uniprot/Q41220", "type": "external" } ], "mass": 10206.0, "length": 89, "protein_name": "Auxin-responsive protein SAUR15", "gene_name": "SAUR15", "organism": "Arabidopsis", "refseq_name": "SAUR-like auxin-responsive protein family", "refseq_ac": [ { "id": "NP_195596", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_195596", "type": "external" } ], "gene_names_uniprotkb": "SAUR15; SAUR-AC1", "gene_names_refseq": "ARABIDOPSIS COLUMBIA SAUR GENE 1; ARABIDOPSIS THALIANA SMALL AUXIN UPREGULATED 15; ATSAUR15; F19H22.6; SAUR-AC1; SAUR15; SAUR_AC1; SMALL AUXIN UP RNA 1 FROM ARABIDOPSIS THALIANA ECOTYPE COLUMBIA; SMALL AUXIN UPREGULATED 15", "protein_names_uniprotkb": "Auxin-responsive protein SAUR15; Protein SMALL AUXIN UP RNA 15; Protein SMALL AUXIN UP RNA FROM ARABIDOPSIS COLUMBIA 1", "protein_names_refseq": "SAUR-like auxin-responsive protein family", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G38850)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "10617198;12036261;22961663;27862469;8159792;8612592;9278170", "class_list": "", "function": "Functions as a positive effector of cell expansion through modulation of auxin transport., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005739 mitochondrion;GO:0005886 plasma membrane", "go_biological_process": "GO:0009733 response to auxin;GO:0009734 auxin-activated signaling pathway", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q41220-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q41931-1", "uniprot_id": [ { "id": "ACCO2_ARATH", "url": "https://www.uniprot.org/uniprot/Q41931", "type": "external" } ], "mass": 36183.0, "length": 320, "protein_name": "1-aminocyclopropane-1-carboxylate oxidase 2", "gene_name": "ACO2", "organism": "Arabidopsis", "refseq_name": "ACC oxidase 2", "refseq_ac": [ { "id": "NP_176428", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_176428", "type": "external" } ], "gene_names_uniprotkb": "ACO2; EI305; F24O1.10", "gene_names_refseq": "ACC OXIDASE; ACC oxidase 2; ACO2; ATACO2; F24O1.40; F24O1_40", "protein_names_uniprotkb": "1-aminocyclopropane-1-carboxylate oxidase 2; 1.14.17.4; ACC oxidase 2; AtACO2", "protein_names_refseq": "ACC oxidase 2", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G62380)", "pathway_count": 1, "publication_count": 16, "publication_id_list": "10409511;11130712;12972669;14593172;15272873;15728341;16920797;17317660;17993622;20018591;20023197;20466843;20627899;21316254;23572148;27862469", "class_list": "", "function": "Enzyme involved in the ethylene biosynthesis. Required to mediate the 1-aminocyclopropane-1-carboxylic acid (ACC)-mediated reversion of the ABA-induced inhibition of seed germination via endosperm rupture. May promote stem elongation by maximizing the extensibility cells, possibly by activating ethylene biosynthesis, in response to very-long-chain fatty acids (VLCFAs C20:0 to C30:0)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 3, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O81093;Q7DLM8", "ec_number_list": [ { "id": "1.14.17.4", "url": "https://www.rhea-db.org/rhea/?query=ec:1.14.17.4", "type": "external" } ], "go_molecular_function": "GO:0005507 copper ion binding;GO:0031418 L-ascorbic acid binding;GO:0016706 2-oxoglutarate-dependent dioxygenase activity;GO:0009815 1-aminocyclopropane-1-carboxylate oxidase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005783 endoplasmic reticulum;GO:0005794 Golgi apparatus;GO:0005829 cytosol", "go_biological_process": "GO:0006952 defense response;GO:0071732 cellular response to nitric oxide;GO:0071398 cellular response to fatty acid;GO:0009693 ethylene biosynthetic process;GO:0010030 positive regulation of seed germination", "synthesized_glycan_count": 0, "hit_score": 1.7, "record_id": "Q41931-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q41951-1", "uniprot_id": [ { "id": "TIP21_ARATH", "url": "https://www.uniprot.org/uniprot/Q41951", "type": "external" } ], "mass": 25027.0, "length": 250, "protein_name": "Aquaporin TIP2-1", "gene_name": "TIP2-1", "organism": "Arabidopsis", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "TIP2-1; MYA6.10", "gene_names_refseq": "", "protein_names_uniprotkb": "Aquaporin TIP2-1; 1; AtTIP2; Delta-TIP; Delta-tonoplast intrinsic protein; Tonoplast intrinsic protein 2-1", "protein_names_refseq": "", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G16240)", "pathway_count": 1, "publication_count": 13, "publication_id_list": "10737809;10819329;11806824;14576283;14593172;15665250;17030879;17151019;22223895;27862469;8281187;8580968;8624437", "class_list": "", "function": "Aquaporin required to facilitate the transport of water from the vacuolar compartment to the cytoplasm. Does not promote glycerol permeability. Its function is impaired by Hg(2+). Transports urea in yeast cells and Xenopus laevis oocytes in a pH-independent manner. Transports methylammonium or ammonium in yeast cells and Xenopus laevis oocytes, preferentially at high medium pH. May participate in vacuolar compartmentation and detoxification of ammonium., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q0WM76;Q42200;Q42201;Q43352;Q8VZ81", "ec_number_list": [], "go_molecular_function": "GO:0042802 identical protein binding;GO:0015250 water channel activity;GO:0015200 methylammonium transmembrane transporter activity", "go_cellular_component": "GO:0005794 Golgi apparatus;GO:0005886 plasma membrane;GO:0016020 membrane;GO:0009506 plasmodesma;GO:0000325 plant-type vacuole", "go_biological_process": "GO:0006833 water transport", "synthesized_glycan_count": 0, "hit_score": 1.4, "record_id": "Q41951-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q41963-1", "uniprot_id": [ { "id": "TIP12_ARATH", "url": "https://www.uniprot.org/uniprot/Q41963", "type": "external" } ], "mass": 25849.0, "length": 253, "protein_name": "Aquaporin TIP1-2", "gene_name": "TIP1-2", "organism": "Arabidopsis", "refseq_name": "tonoplast intrinsic protein 2", "refseq_ac": [ { "id": "NP_189283", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_189283", "type": "external" } ], "gene_names_uniprotkb": "TIP1-2; MFE16.17; SITIP; TIP2", "gene_names_refseq": "2; GAMMA-TIP2; SALT-STRESS INDUCIBLE PROTEIN; SALT-STRESS INDUCIBLE TONOPLAST INTRINSIC PROTEIN; SITIP; TIP1; TIP2; TONOPLAST INTRINSIC PROTEIN 2; tonoplast intrinsic protein 2", "protein_names_uniprotkb": "Aquaporin TIP1-2; 2; AtTIP1; Gamma-TIP2; Gamma-tonoplast intrinsic protein 2; Salt stress-induced tonoplast intrinsic protein; Tonoplast intrinsic protein 1-2", "protein_names_refseq": "tonoplast intrinsic protein 2", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G26520)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "10102577;10819329;11806824;14576283;14593172;17030879;17105724;27862469;8281187", "class_list": "", "function": "Water channel required to facilitate the transport of water across cell membrane. May be involved in the osmoregulation in plants under high osmotic stress such as under a high salt condition. Transports urea in yeast cells in a pH-independent manner. Transports H(2)O(2) in yeast cells., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O23117;O82446;Q9LRV6", "ec_number_list": [], "go_molecular_function": "GO:0003729 mRNA binding;GO:0015250 water channel activity", "go_cellular_component": "GO:0005783 endoplasmic reticulum;GO:0005794 Golgi apparatus;GO:0005829 cytosol;GO:0005886 plasma membrane;GO:0005773 vacuole", "go_biological_process": "GO:0006833 water transport;GO:1902074 response to salt;GO:0080170 hydrogen peroxide transmembrane transport", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "Q41963-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q42029-1", "uniprot_id": [ { "id": "PSBP1_ARATH", "url": "https://www.uniprot.org/uniprot/Q42029", "type": "external" } ], "mass": 28095.0, "length": 263, "protein_name": "Oxygen-evolving enhancer protein 2-1, chloroplastic", "gene_name": "PSBP1", "organism": "Arabidopsis", "refseq_name": "photosystem II subunit P-1", "refseq_ac": [ { "id": "NP_001117239", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001117239", "type": "external" } ], "gene_names_uniprotkb": "PSBP1; F12K11.3; F4H5_18; PSBP", "gene_names_refseq": "F12K11.3; F12K11_3; OE23; OEE2; OXYGEN EVOLVING COMPLEX SUBUNIT 23 KDA; OXYGEN-EVOLVING ENHANCER PROTEIN 2; PHOTOSYSTEM II SUBUNIT P; PSBP-1; PSII-P; photosystem II subunit P-1", "protein_names_uniprotkb": "Oxygen-evolving enhancer protein 2-1, chloroplastic; 23 kDa subunit of oxygen evolving system of photosystem II; 23 kDa thylakoid membrane protein; OEC 23 kDa subunit; OEC23; OEE2", "protein_names_refseq": "photosystem II subunit P-1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G06680)", "pathway_count": 1, "publication_count": 16, "publication_id_list": "11130712;11719511;11826309;12767910;14593172;17827269;18431481;19376835;22092075;23111157;23572148;23660473;27862469;29654922;8580968;9039496", "class_list": "", "function": "May be involved in the regulation of photosystem II., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 7, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0003729 mRNA binding;GO:0019904 protein domain specific binding;GO:0005509 calcium ion binding;GO:0008266 poly(U) RNA binding;GO:1901149 salicylic acid binding", "go_cellular_component": "GO:0005576 extracellular region;GO:0019898 extrinsic component of membrane;GO:0009535 chloroplast thylakoid membrane;GO:0009507 chloroplast;GO:0009534 chloroplast thylakoid", "go_biological_process": "GO:0019684 photosynthesis, light reaction;GO:0048564 photosystem I assembly", "synthesized_glycan_count": 0, "hit_score": 1.7, "record_id": "Q42029-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q42134-1", "uniprot_id": [ { "id": "PSA5B_ARATH", "url": "https://www.uniprot.org/uniprot/Q42134", "type": "external" } ], "mass": 25977.0, "length": 237, "protein_name": "Proteasome subunit alpha type-5-B", "gene_name": "PAE2", "organism": "Arabidopsis", "refseq_name": "20S proteasome alpha subunit E2", "refseq_ac": [ { "id": "NP_188046", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_188046", "type": "external" } ], "gene_names_uniprotkb": "PAE2; MLN21.8; PRCZ", "gene_names_refseq": "20S PROTEASOME SUBUNIT PAE2; 20S proteasome alpha subunit E2; PAE2", "protein_names_uniprotkb": "Proteasome subunit alpha type-5-B; 20S proteasome alpha subunit E-2; Proteasome component Z", "protein_names_refseq": "20S proteasome alpha subunit E2", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G14290)", "pathway_count": 1, "publication_count": 11, "publication_id_list": "10363660;10819329;14593172;14623884;20516081;25561503;27862469;28011693;8580968;9373170;9611183", "class_list": "", "function": "The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. The proteasome has an ATP-dependent proteolytic activity., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0004540 RNA nuclease activity;GO:0003735 structural constituent of ribosome", "go_cellular_component": "GO:0005634 nucleus;GO:0005829 cytosol;GO:0022626 cytosolic ribosome;GO:0000502 proteasome complex;GO:0019773 proteasome core complex, alpha-subunit complex", "go_biological_process": "GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process;GO:0006511 ubiquitin-dependent protein catabolic process", "synthesized_glycan_count": 0, "hit_score": 1.2, "record_id": "Q42134-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q42290-1", "uniprot_id": [ { "id": "MPPB_ARATH", "url": "https://www.uniprot.org/uniprot/Q42290", "type": "external" } ], "mass": 59160.0, "length": 531, "protein_name": "Probable mitochondrial-processing peptidase subunit beta, mitochondrial", "gene_name": "MPPbeta", "organism": "Arabidopsis", "refseq_name": "Insulinase (Peptidase family M16) protein", "refseq_ac": [ { "id": "NP_186858", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_186858", "type": "external" } ], "gene_names_uniprotkb": "MPPbeta; F1C9.12", "gene_names_refseq": "F1C9.12; F1C9_12; MPPBETA", "protein_names_uniprotkb": "Probable mitochondrial-processing peptidase subunit beta, mitochondrial; 3.4.24.64; Beta-MPP; Complex III subunit I; Core protein I; Cytochrome b-c1 complex subunit 1, mitochondrial; Ubiquinol-cytochrome c oxidoreductase core protein 1", "protein_names_refseq": "Insulinase (Peptidase family M16) protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G02090)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "11130713;12970493;14593172;14671022;18189341;18305213;25732537;27862469;8580968", "class_list": "", "function": "Catalytic subunit of the essential mitochondrial processing protease (MPP), which cleaves the mitochondrial sequence off newly imported precursors proteins (By similarity). Preferentially, cleaves after an arginine at position P2 (By similarity)., [UniProtKB, UniProtKB, UniProtKB]; Component of the ubiquinol-cytochrome c oxidoreductase, a multisubunit transmembrane complex that is part of the mitochondrial electron transport chain which drives oxidative phosphorylation. The respiratory chain contains 3 multisubunit complexes succinate dehydrogenase (complex II, CII), ubiquinol-cytochrome c oxidoreductase (cytochrome b-c1 complex, complex III, CIII) and cytochrome c oxidase (complex IV, CIV), that cooperate to transfer electrons derived from NADH and succinate to molecular oxygen, creating an electrochemical gradient over the inner membrane that drives transmembrane transport and the ATP synthase. The cytochrome b-c1 complex catalyzes electron transfer from ubiquinol to cytochrome c, linking this redox reaction to translocation of protons across the mitochondrial inner membrane, with protons being carried across the membrane as hydrogens on the quinol. In the process called Q cycle, 2 protons are consumed from the matrix, 4 protons are released into the intermembrane space and 2 electrons are passed to cytochrome c., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q0WWT6;Q9SGA7", "ec_number_list": [], "go_molecular_function": "GO:0004222 metalloendopeptidase activity;GO:0008270 zinc ion binding;GO:0016491 oxidoreductase activity;GO:0009003 signal peptidase activity", "go_cellular_component": "GO:0005730 nucleolus;GO:0005739 mitochondrion;GO:0005741 mitochondrial outer membrane;GO:0005743 mitochondrial inner membrane;GO:0005758 mitochondrial intermembrane space", "go_biological_process": "GO:0006627 protein processing involved in protein targeting to mitochondrion", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "Q42290-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q42342-1", "uniprot_id": [ { "id": "CYB5E_ARATH", "url": "https://www.uniprot.org/uniprot/Q42342", "type": "external" } ], "mass": 15084.0, "length": 134, "protein_name": "Cytochrome b5 isoform E", "gene_name": "CYTB5-E", "organism": "Arabidopsis", "refseq_name": "cytochrome B5 isoform E", "refseq_ac": [ { "id": "NP_200168", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_200168", "type": "external" } ], "gene_names_uniprotkb": "CYTB5-E; B5-A; CB5-A; CB5-E; MNC6.10", "gene_names_refseq": "ARABIDOPSIS CYTOCHROME B5 ISOFORM E; ATB5-A; ATCB5-E; B5 #2; CB5-E; cytochrome B5 isoform E", "protein_names_uniprotkb": "Cytochrome b5 isoform E; AtCb5-A; AtCb5-E; Cytochrome b5 isoform 1; Cytochrome b5 isoform A", "protein_names_refseq": "cytochrome B5 isoform E", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G53560)", "pathway_count": 1, "publication_count": 11, "publication_id_list": "14593172;15060130;19054355;20215589;21057222;22384013;22773744;27862469;8580968;9872454;9880378", "class_list": "", "function": "Membrane bound hemoprotein which function as an electron carrier for several membrane bound oxygenases, including fatty acid desaturases., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9SB05", "ec_number_list": [], "go_molecular_function": "GO:0046872 metal ion binding;GO:0020037 heme binding", "go_cellular_component": "GO:0005783 endoplasmic reticulum;GO:0005886 plasma membrane;GO:0016020 membrane;GO:0005789 endoplasmic reticulum membrane;GO:0009535 chloroplast thylakoid membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 1.2, "record_id": "Q42342-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q42344-1", "uniprot_id": [ { "id": "HMGB4_ARATH", "url": "https://www.uniprot.org/uniprot/Q42344", "type": "external" } ], "mass": 15420.0, "length": 138, "protein_name": "High mobility group B protein 4", "gene_name": "HMGB4", "organism": "Arabidopsis", "refseq_name": "high mobility group B4", "refseq_ac": [ { "id": "NP_001031364", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001031364", "type": "external" } ], "gene_names_uniprotkb": "HMGB4; HMGGAMMA; HMGG; MJB20.12; NFD04; NFD4", "gene_names_refseq": "HMGB4; MJB20.12; MJB20_12; NFD04; NFD4; NUCLEOSOME/CHROMATIN ASSEMBLY FACTOR D4; NUCLEOSOME/CHROMATIN ASSEMBLY FACTOR; high mobility group B4", "protein_names_uniprotkb": "High mobility group B protein 4; AtHMGgamma; HMG gamma; High mobility group protein G; Nucleosome/chromatin assembly factor group D 04; Nucleosome/chromatin assembly factor group D 4", "protein_names_refseq": "high mobility group B4", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G17560)", "pathway_count": 1, "publication_count": 22, "publication_id_list": "10617197;12653554;14593172;17169924;18463617;19245862;19376835;19423640;20123078;20466843;21768351;23328941;23572148;23660473;23776212;25561503;26091701;26187819;27862469;28011693;30833711;9461286", "class_list": "", "function": "Binds preferentially double-stranded DNA., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 4, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "B9DG70;O49598;Q2V484;Q8LCY0;Q94K96", "ec_number_list": [], "go_molecular_function": "GO:0003677 DNA binding;GO:0003682 chromatin binding;GO:0003700 DNA-binding transcription factor activity;GO:0030527 structural constituent of chromatin", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005829 cytosol;GO:0000785 chromatin", "go_biological_process": "GO:0006325 chromatin organization", "synthesized_glycan_count": 0, "hit_score": 2.3, "record_id": "Q42344-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q42374-1", "uniprot_id": [ { "id": "SY111_ARATH", "url": "https://www.uniprot.org/uniprot/Q42374", "type": "external" } ], "mass": 35275.0, "length": 310, "protein_name": "Syntaxin-related protein KNOLLE", "gene_name": "KN", "organism": "Arabidopsis", "refseq_name": "syntaxin of plants 111", "refseq_ac": [ { "id": "NP_172332", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_172332", "type": "external" } ], "gene_names_uniprotkb": "KN; F22O13.4; SYP111", "gene_names_refseq": "ATSYP111; F22O13.4; F22O13_4; KNOLLE; KN; SYP111; syntaxin of plants 111", "protein_names_uniprotkb": "Syntaxin-related protein KNOLLE; AtSYP111; Syntaxin-111", "protein_names_refseq": "syntaxin of plants 111", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G08560)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "11130712;11157980;11591731;12068098;14593172;25561503;27862469;8548827;9396754", "class_list": "", "function": "Involved in cytokinesis. Acts as a cell plate-specific syntaxin, required for the fusion of vesicles at the plane of cell division., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 3, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q8VXY8;Q9FRS8", "ec_number_list": [], "go_molecular_function": "GO:0000149 SNARE binding;GO:0005484 SNAP receptor activity", "go_cellular_component": "GO:0005886 plasma membrane;GO:0012505 endomembrane system;GO:0031201 SNARE complex;GO:0009506 plasmodesma;GO:0009504 cell plate", "go_biological_process": "GO:0006886 intracellular protein transport;GO:0051301 cell division;GO:0061025 membrane fusion;GO:0006887 exocytosis;GO:0006906 vesicle fusion", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "Q42374-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q42379-1", "uniprot_id": [ { "id": "MYB7_ARATH", "url": "https://www.uniprot.org/uniprot/Q42379", "type": "external" } ], "mass": 31009.0, "length": 269, "protein_name": "Transcription factor MYB7", "gene_name": "MYB7", "organism": "Arabidopsis", "refseq_name": "myb domain protein 7", "refseq_ac": [ { "id": "NP_179263", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_179263", "type": "external" } ], "gene_names_uniprotkb": "MYB7", "gene_names_refseq": "ARABIDOPSIS THALIANA MYB DOMAIN PROTEIN 7; ATMYB7; ATY49; MYB7; T24I21.13; T24I21_13; myb domain protein 7", "protein_names_uniprotkb": "Transcription factor MYB7; AtMYB7; AtY49; Myb-related protein 7; Myb-related protein Y49", "protein_names_refseq": "myb domain protein 7", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G16720)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "10617197;14593172;24319076;25053018;26332741;27862469;8580966;8980549", "class_list": "", "function": "Transcription factor involved in the negative regulation of flavonol biosynthesis. Represses the early phenylpropanoid genes, phenylalanine ammonia-lyase (PAL), cinnamate 4-hydroxylase (C4H) and 4-coumarate-CoA ligase (4CL), as well as the flavonoid-specific genes, flavonoid 3'-hydroxylase (F3'H) and dihydroflavonol 4-reductase (DFR) (PubMed:24319076). Plays a role in seed germination inhibition. Negatively regulates the expression of the abscisic acid (ABA) signaling transcription factor ABI5 in seeds (PubMed:25053018)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q8VY75;Q9SAL8", "ec_number_list": [], "go_molecular_function": "GO:0003700 DNA-binding transcription factor activity;GO:0000976 transcription cis-regulatory region binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006355 regulation of DNA-templated transcription;GO:1900384 regulation of flavonol biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "Q42379-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q42396-1", "uniprot_id": [ { "id": "CDPKC_ARATH", "url": "https://www.uniprot.org/uniprot/Q42396", "type": "external" } ], "mass": 55379.0, "length": 490, "protein_name": "Calcium-dependent protein kinase 12", "gene_name": "CPK12", "organism": "Arabidopsis", "refseq_name": "calmodulin-like domain protein kinase 9", "refseq_ac": [ { "id": "NP_197748", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_197748", "type": "external" } ], "gene_names_uniprotkb": "CPK12; CDPK9; MQM1.15", "gene_names_refseq": "ARABIDOPSIS THALIANA CALMODULIN-LIKE DOMAIN PROTEIN KINASE 9; ATCDPK9; ATCPK12; CALCIUM-DEPENDENT PROTEIN KINASE 12; CALCIUM-DEPENDENT PROTEIN KINASE; CDPK9; CPK12; calmodulin-like domain protein kinase 9", "protein_names_uniprotkb": "Calcium-dependent protein kinase 12; 2.7.11.1; AtCDPK9; Calcium-dependent protein kinase isoform CDPK9", "protein_names_refseq": "calmodulin-like domain protein kinase 9", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G23580)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "10718197;12068094;12805596;16438971;27862469;8704134", "class_list": "", "function": "May play a role in signal transduction pathways that involve calcium as a second messenger., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [ { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.3.2.27", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.2.27", "type": "external" }, { "id": "2.7.10.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.-", "type": "external" }, { "id": "3.1.4.46", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.4.46", "type": "external" }, { "id": "2.7.11.25", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.25", "type": "external" }, { "id": "2.7.11.22", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.22", "type": "external" }, { "id": "2.7.10.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.1", "type": "external" }, { "id": "2.7.11.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.-", "type": "external" }, { "id": "2.7.11.24", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.24", "type": "external" }, { "id": "2.7.12.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.1", "type": "external" }, { "id": "2.7.11.23", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.23", "type": "external" }, { "id": "2.7.12.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.2", "type": "external" }, { "id": "2.7.-.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.-.-", "type": "external" }, { "id": "3.1.26.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.26.-", "type": "external" }, { "id": "3.1.3.16", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.16", "type": "external" }, { "id": "2.7.11.34", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.34", "type": "external" }, { "id": "4.6.1.2", "url": "https://www.rhea-db.org/rhea/?query=ec:4.6.1.2", "type": "external" } ], "go_molecular_function": "GO:0009931 calcium-dependent protein serine/threonine kinase activity;GO:0005516 calmodulin binding;GO:0005524 ATP binding;GO:0005509 calcium ion binding;GO:0004683 calcium/calmodulin-dependent protein kinase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005886 plasma membrane", "go_biological_process": "GO:0035556 intracellular signal transduction;GO:0009738 abscisic acid-activated signaling pathway", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q42396-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q42400-1", "uniprot_id": [ { "id": "AAP1_ARATH", "url": "https://www.uniprot.org/uniprot/Q42400", "type": "external" } ], "mass": 52895.0, "length": 485, "protein_name": "Amino acid permease 1", "gene_name": "AAP1", "organism": "Arabidopsis", "refseq_name": "amino acid permease 1", "refseq_ac": [ { "id": "NP_176132", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_176132", "type": "external" } ], "gene_names_uniprotkb": "AAP1; F19C14.3; NAT2; ZCF54", "gene_names_refseq": "AAP1; AtAAP1; NAT2; NEUTRAL AMINO ACID TRANSPORTER 2; amino acid permease 1", "protein_names_uniprotkb": "Amino acid permease 1; Amino acid transporter AAP1; Neutral amino acid transporter II", "protein_names_refseq": "amino acid permease 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G58360)", "pathway_count": 1, "publication_count": 14, "publication_id_list": "10548732;11130712;12148530;12244056;17419840;19392706;27862469;7608199;8281191;8327465;8356039;8567681;9374550;9675899", "class_list": "", "function": "Amino acid-proton symporter. Stereospecific transporter with a broad specificity for histidine, glutamate and neutral amino acids. Reduced affinities for asparagine and valine. Involved in amino acid uptake from the apoplastic cavity into the embryo cells for storage protein accumulation and in root amino acid uptake., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O48546", "ec_number_list": [], "go_molecular_function": "GO:0015180 L-alanine transmembrane transporter activity;GO:0015193 L-proline transmembrane transporter activity;GO:0015171 amino acid transmembrane transporter activity;GO:0015175 neutral L-amino acid transmembrane transporter activity;GO:0015186 L-glutamine transmembrane transporter activity", "go_cellular_component": "GO:0005886 plasma membrane;GO:0016020 membrane", "go_biological_process": "GO:0015804 neutral amino acid transport;GO:0003333 amino acid transmembrane transport;GO:0015808 L-alanine transport;GO:0098712 L-glutamate import across plasma membrane;GO:0009624 response to nematode", "synthesized_glycan_count": 0, "hit_score": 1.5, "record_id": "Q42400-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q42406-1", "uniprot_id": [ { "id": "CP18D_ARATH", "url": "https://www.uniprot.org/uniprot/Q42406", "type": "external" } ], "mass": 18378.0, "length": 172, "protein_name": "Peptidyl-prolyl cis-trans isomerase CYP18-4", "gene_name": "CYP18-4", "organism": "Arabidopsis", "refseq_name": "rotamase cyclophilin 5", "refseq_ac": [ { "id": "NP_195213", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_195213", "type": "external" } ], "gene_names_uniprotkb": "CYP18-4; 43H1; CYP1; CYPA; ROC5; T11I11.110", "gene_names_refseq": "ARABIDOPSIS THALIANA CYCLOPHILIN 1; ATCYP1; CYCLOPHILIN; ROC5; ROTAMASE CYP; rotamase cyclophilin 5", "protein_names_uniprotkb": "Peptidyl-prolyl cis-trans isomerase CYP18-4; 5.2.1.8; Cyclophilin of 18 kDa 4; Cyclophilin-1; PPIase CYP18-4; Rotamase cyclophilin-5", "protein_names_refseq": "rotamase cyclophilin 5", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G34870)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "10361676;10617198;14593172;15047905;15051864;27862469;7767603;7918654;9426607;9618535", "class_list": "", "function": "PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q0WRR9", "ec_number_list": [ { "id": "5.2.1.8", "url": "https://www.rhea-db.org/rhea/?query=ec:5.2.1.8", "type": "external" }, { "id": "2.3.2.27", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.2.27", "type": "external" } ], "go_molecular_function": "GO:0016018 cyclosporin A binding;GO:0003755 peptidyl-prolyl cis-trans isomerase activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005794 Golgi apparatus;GO:0005829 cytosol;GO:0005886 plasma membrane;GO:0010494 cytoplasmic stress granule", "go_biological_process": "GO:0007165 signal transduction;GO:0006457 protein folding", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "Q42406-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q42410-1", "uniprot_id": [ { "id": "ZAT12_ARATH", "url": "https://www.uniprot.org/uniprot/Q42410", "type": "external" } ], "mass": 17332.0, "length": 162, "protein_name": "Zinc finger protein ZAT12", "gene_name": "ZAT12", "organism": "Arabidopsis", "refseq_name": "C2H2-type zinc finger family protein", "refseq_ac": [ { "id": "NP_200790", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_200790", "type": "external" } ], "gene_names_uniprotkb": "ZAT12; MMN10.11; RHL41", "gene_names_refseq": "AtZAT12; MMN10.11; MMN10_11; RESPONSIVE TO HIGH LIGHT 41; RHL41; ZAT12", "protein_names_uniprotkb": "Zinc finger protein ZAT12; Protein RESPONSIVE TO HIGH LIGHT 41", "protein_names_refseq": "C2H2-type zinc finger family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G59820)", "pathway_count": 1, "publication_count": 11, "publication_id_list": "11069694;12368499;14593172;14722088;15634197;16183833;18201973;18922600;27862469;9132053;9872454", "class_list": "", "function": "Transcriptional repressor involved in light acclimation, cold and oxidative stress responses. May regulate a collection of transcripts involved in response to high-light, cold and oxidative stress., [UniProtKB, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q8LA47", "ec_number_list": [], "go_molecular_function": "GO:0003700 DNA-binding transcription factor activity;GO:0008270 zinc ion binding;GO:0000976 transcription cis-regulatory region binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006979 response to oxidative stress;GO:0009409 response to cold;GO:0071456 cellular response to hypoxia;GO:0009611 response to wounding", "synthesized_glycan_count": 0, "hit_score": 1.2, "record_id": "Q42410-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q42418-1", "uniprot_id": [ { "id": "PRF2_ARATH", "url": "https://www.uniprot.org/uniprot/Q42418", "type": "external" } ], "mass": 13998.0, "length": 131, "protein_name": "Profilin-2", "gene_name": "PRF2", "organism": "Arabidopsis", "refseq_name": "profilin 2", "refseq_ac": [ { "id": "NP_194664", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_194664", "type": "external" } ], "gene_names_uniprotkb": "PRF2; F17A13.170; PFN2; PRO2", "gene_names_refseq": "F17A13.170; F17A13_170; PFN2; PRF2; PRO2; PROFILIN 2; PROFILIN; profilin 2", "protein_names_uniprotkb": "Profilin-2; AtPROF2; AthPRF2", "protein_names_refseq": "profilin 2", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G29350)", "pathway_count": 1, "publication_count": 15, "publication_id_list": "10617198;14593172;16313636;16361517;19200149;19423640;21090759;26160044;26578694;26996265;27862469;29861135;30056100;8685262;8771785", "class_list": "", "function": "Binds to actin monomers and regulates the organization of the actin cytoskeleton (PubMed:21090759). At high concentrations, profilin prevents the polymerization of actin, whereas it enhances it at low concentrations (PubMed:16313636, PubMed:26996265, PubMed:29861135). At low concentrations, associates with the poly-proline motif of formins to enhance actin filament elongation rate (PubMed:29861135). Binds G-actin and poly-L-proline with low affinity in vitro (PubMed:19200149). Binds ACT1, ACT7 and ACT11 and inhibits actin polymerization (PubMed:26578694). May be involved in the cross-talk between vesicular trafficking and the actin cytoskeleton (PubMed:21090759). Inhibits cell growth of various pathogenic fungal strains (PubMed:30056100). May play a role as antifungal proteins in the defense system against fungal pathogen attacks (PubMed:30056100)., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A178V4L3;C0Z3G0;Q8LCJ1;Q9FS48", "ec_number_list": [], "go_molecular_function": "GO:0003785 actin monomer binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005783 endoplasmic reticulum;GO:0005829 cytosol;GO:0005856 cytoskeleton", "go_biological_process": "GO:0006952 defense response;GO:0008154 actin polymerization or depolymerization;GO:0010229 inflorescence development;GO:0048366 leaf development;GO:0048527 lateral root development", "synthesized_glycan_count": 0, "hit_score": 1.6, "record_id": "Q42418-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q42438-1", "uniprot_id": [ { "id": "CDPK8_ARATH", "url": "https://www.uniprot.org/uniprot/Q42438", "type": "external" } ], "mass": 59941.0, "length": 533, "protein_name": "Calcium-dependent protein kinase 8", "gene_name": "CPK8", "organism": "Arabidopsis", "refseq_name": "calcium-dependent protein kinase 19", "refseq_ac": [ { "id": "NP_197446", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_197446", "type": "external" } ], "gene_names_uniprotkb": "CPK8; CDPK19; F7K24.200", "gene_names_refseq": "CALCIUM-DEPENDENT PROTEIN KINASE 19; CDPK19; CPK8; F7K24.200; F7K24_200; calcium-dependent protein kinase 19", "protein_names_uniprotkb": "Calcium-dependent protein kinase 8; 2.7.11.1; AtCDPK19; Calcium-dependent protein kinase isoform CDPK19", "protein_names_refseq": "calcium-dependent protein kinase 19", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G19450)", "pathway_count": 1, "publication_count": 27, "publication_id_list": "11130714;12068094;12805596;12913141;14506206;15308754;17317660;17651370;18463617;19245862;19376835;19688752;20374526;20466843;21768351;23111157;23572148;23660473;25561503;26091701;26187819;27419465;27532006;27862469;28011693;30833711;8704134", "class_list": "", "function": "May play a role in signal transduction pathways that involve calcium as a second messenger., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 10, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q0WUS5", "ec_number_list": [ { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.3.2.27", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.2.27", "type": "external" }, { "id": "2.7.10.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.-", "type": "external" }, { "id": "3.1.4.46", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.4.46", "type": "external" }, { "id": "2.7.11.25", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.25", "type": "external" }, { "id": "2.7.11.22", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.22", "type": "external" }, { "id": "2.7.10.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.1", "type": "external" }, { "id": "2.7.11.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.-", "type": "external" }, { "id": "2.7.11.24", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.24", "type": "external" }, { "id": "2.7.12.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.1", "type": "external" }, { "id": "2.7.11.23", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.23", "type": "external" }, { "id": "2.7.12.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.2", "type": "external" }, { "id": "2.7.-.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.-.-", "type": "external" }, { "id": "3.1.26.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.26.-", "type": "external" }, { "id": "3.1.3.16", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.16", "type": "external" }, { "id": "2.7.11.34", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.34", "type": "external" }, { "id": "4.6.1.2", "url": "https://www.rhea-db.org/rhea/?query=ec:4.6.1.2", "type": "external" } ], "go_molecular_function": "GO:0009931 calcium-dependent protein serine/threonine kinase activity;GO:0005516 calmodulin binding;GO:0005524 ATP binding;GO:0005509 calcium ion binding;GO:0004683 calcium/calmodulin-dependent protein kinase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005886 plasma membrane", "go_biological_process": "GO:0035556 intracellular signal transduction", "synthesized_glycan_count": 0, "hit_score": 2.8, "record_id": "Q42438-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q42449-1", "uniprot_id": [ { "id": "PRF1_ARATH", "url": "https://www.uniprot.org/uniprot/Q42449", "type": "external" } ], "mass": 14266.0, "length": 131, "protein_name": "Profilin-1", "gene_name": "PRF1", "organism": "Arabidopsis", "refseq_name": "profilin 1", "refseq_ac": [ { "id": "NP_179566", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_179566", "type": "external" } ], "gene_names_uniprotkb": "PRF1; F6F22.21; PFN1; PRO1", "gene_names_refseq": "F6F22.21; F6F22_21; PFN1; PRF1; PROFILIN 1; profilin 1", "protein_names_uniprotkb": "Profilin-1; AtPROF1; AthPRF1", "protein_names_refseq": "profilin 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G19760)", "pathway_count": 1, "publication_count": 14, "publication_id_list": "10617197;11340190;14593172;17933902;19200149;26160044;26574597;26578694;27862469;29861135;30056100;8685262;8771785;9016723", "class_list": "", "function": "Binds to actin monomers and regulates the organization of the actin cytoskeleton (PubMed:26574597). At high concentrations, profilin prevents the polymerization of actin, whereas it enhances it at low concentrations (PubMed:29861135). At low concentrations, associates with the poly-proline motif of formins to enhance actin filament elongation rate (PubMed:29861135). Binds ACT1, ACT7 and ACT11 and inhibits actin polymerization (PubMed:26578694). Coordinates the stochastic dynamic properties of actin filaments by modulating formin-mediated actin nucleation and assembly during axial cell expansion (PubMed:26574597). Binds G-actin and poly-L-proline in vitro (PubMed:19200149). Inhibits cell growth of various pathogenic fungal strains (PubMed:30056100). May play a role as antifungal proteins in the defense system against fungal pathogen attacks (PubMed:30056100)., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0003785 actin monomer binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005730 nucleolus;GO:0005737 cytoplasm;GO:0005739 mitochondrion;GO:0005819 spindle", "go_biological_process": "GO:0006952 defense response;GO:0008154 actin polymerization or depolymerization;GO:0009826 unidimensional cell growth;GO:0010229 inflorescence development;GO:0048366 leaf development", "synthesized_glycan_count": 0, "hit_score": 1.5, "record_id": "Q42449-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q42472-1", "uniprot_id": [ { "id": "DCE2_ARATH", "url": "https://www.uniprot.org/uniprot/Q42472", "type": "external" } ], "mass": 56141.0, "length": 494, "protein_name": "Glutamate decarboxylase 2", "gene_name": "GAD2", "organism": "Arabidopsis", "refseq_name": "glutamate decarboxylase 2", "refseq_ac": [ { "id": "NP_001117556", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001117556", "type": "external" } ], "gene_names_uniprotkb": "GAD2; F12P19.12; GDH2", "gene_names_refseq": "F12P19.12; F12P19_12; GAD2; GLUTAMATE DECARBOXYLASE 2; glutamate decarboxylase 2", "protein_names_uniprotkb": "Glutamate decarboxylase 2; 4.1.1.15; GAD 2", "protein_names_refseq": "glutamate decarboxylase 2", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G65960)", "pathway_count": 1, "publication_count": 12, "publication_id_list": "11130712;14593172;15604684;18077464;19580813;20122158;23572148;23820729;27862469;9112779;9700069;9701597", "class_list": "", "function": "Catalyzes the conversion of glutamate to 4-aminobutanoate (GABA). The calmodulin-binding is calcium-dependent and it is proposed to directly or indirectly form a calcium regulated control of GABA biosynthesis., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 3, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q8RXH0;Q944L6", "ec_number_list": [ { "id": "4.1.1.15", "url": "https://www.rhea-db.org/rhea/?query=ec:4.1.1.15", "type": "external" } ], "go_molecular_function": "GO:0005516 calmodulin binding;GO:0030170 pyridoxal phosphate binding;GO:0004351 glutamate decarboxylase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005829 cytosol", "go_biological_process": "GO:0006536 glutamate metabolic process;GO:0006538 L-glutamate catabolic process", "synthesized_glycan_count": 0, "hit_score": 1.3, "record_id": "Q42472-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q42479-1", "uniprot_id": [ { "id": "CDPK3_ARATH", "url": "https://www.uniprot.org/uniprot/Q42479", "type": "external" } ], "mass": 59336.0, "length": 529, "protein_name": "Calcium-dependent protein kinase 3", "gene_name": "CPK3", "organism": "Arabidopsis", "refseq_name": "calcium-dependent protein kinase 6", "refseq_ac": [ { "id": "NP_194096", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_194096", "type": "external" } ], "gene_names_uniprotkb": "CPK3; CDPK6; F9D16.120", "gene_names_refseq": "AtCDPK6; CALCIUM-DEPENDENT PROTEIN KINASE 6; CDPK6; CPK3; Calcium dependent protein kinase 3; F9D16.120; F9D16_120; calcium-dependent protein kinase 6", "protein_names_uniprotkb": "Calcium-dependent protein kinase 3; 2.7.11.1; AtCDPK6; Calcium-dependent protein kinase isoform CDPK6", "protein_names_refseq": "calcium-dependent protein kinase 6", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G23650)", "pathway_count": 1, "publication_count": 15, "publication_id_list": "10617198;12068094;12805596;12913141;14593172;17032064;19376835;23111157;23776212;25561503;27862469;28011693;29654922;30361234;8704134", "class_list": "", "function": "May play a role in signal transduction pathways that involve calcium as a second messenger. Functions in abscisic acid (ABA) regulation of guard cell S-type anion- and Ca(2+)-permeable channels and stomatal closure., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 15, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q941A2", "ec_number_list": [ { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.3.2.27", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.2.27", "type": "external" }, { "id": "2.7.10.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.-", "type": "external" }, { "id": "3.1.4.46", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.4.46", "type": "external" }, { "id": "2.7.11.25", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.25", "type": "external" }, { "id": "2.7.11.22", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.22", "type": "external" }, { "id": "2.7.10.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.1", "type": "external" }, { "id": "2.7.11.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.-", "type": "external" }, { "id": "2.7.11.24", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.24", "type": "external" }, { "id": "2.7.12.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.1", "type": "external" }, { "id": "2.7.11.23", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.23", "type": "external" }, { "id": "2.7.12.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.2", "type": "external" }, { "id": "2.7.-.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.-.-", "type": "external" }, { "id": "3.1.26.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.26.-", "type": "external" }, { "id": "3.1.3.16", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.16", "type": "external" }, { "id": "2.7.11.34", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.34", "type": "external" }, { "id": "4.6.1.2", "url": "https://www.rhea-db.org/rhea/?query=ec:4.6.1.2", "type": "external" } ], "go_molecular_function": "GO:0009931 calcium-dependent protein serine/threonine kinase activity;GO:0004672 protein kinase activity;GO:0004674 protein serine/threonine kinase activity;GO:0005516 calmodulin binding;GO:0005524 ATP binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005829 cytosol;GO:0005886 plasma membrane;GO:0016020 membrane", "go_biological_process": "GO:0035556 intracellular signal transduction;GO:0046777 protein autophosphorylation;GO:0009651 response to salt stress;GO:0009738 abscisic acid-activated signaling pathway;GO:0010119 regulation of stomatal movement", "synthesized_glycan_count": 0, "hit_score": 1.6, "record_id": "Q42479-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q42484-1", "uniprot_id": [ { "id": "RPS2_ARATH", "url": "https://www.uniprot.org/uniprot/Q42484", "type": "external" } ], "mass": 104641.0, "length": 909, "protein_name": "Disease resistance protein RPS2", "gene_name": "RPS2", "organism": "Arabidopsis", "refseq_name": "NB-ARC domain-containing disease resistance protein", "refseq_ac": [ { "id": "NP_194339", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_194339", "type": "external" } ], "gene_names_uniprotkb": "RPS2; F20B18.200", "gene_names_refseq": "DISEASE RESISTANCE PROTEIN RPS2; F20B18.200; F20B18_200; RESISTANT TO P. SYRINGAE 2; RPS2", "protein_names_uniprotkb": "Disease resistance protein RPS2; Resistance to Pseudomonas syringae protein 2", "protein_names_refseq": "NB-ARC domain-containing disease resistance protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G26090)", "pathway_count": 1, "publication_count": 17, "publication_id_list": "10617198;10849351;11148296;11204781;11333251;11910074;12581526;12581527;12618410;14593172;18191794;26867179;27862469;7923358;8091210;8986840;9670562", "class_list": "", "function": "Disease resistance (R) protein that specifically recognizes the AvrRpt2 type III effector avirulence protein from Pseudomonas syringae. Resistance proteins guard the plant against pathogens that contain an appropriate avirulence protein via an indirect interaction with this avirulence protein. That triggers a defense system including the hypersensitive response, which restricts the pathogen growth. Acts via its interaction with RIN4, and probably triggers the plant resistance when RIN4 is degraded by AvrRpt2., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 15, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O82096;Q8L3R0;Q8L3W3;Q8L4X9;Q8L4Y0;Q8L587;Q8L5B3;Q8LKZ8;Q8LKZ9;Q8LL00;Q8LL01;Q9ASP5", "ec_number_list": [], "go_molecular_function": "GO:0005524 ATP binding;GO:0043531 ADP binding", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005886 plasma membrane", "go_biological_process": "GO:0098542 defense response to other organism;GO:0006952 defense response;GO:0016045 detection of bacterium;GO:0042742 defense response to bacterium;GO:0002220 innate immune response activating cell surface receptor signaling pathway", "synthesized_glycan_count": 0, "hit_score": 1.8, "record_id": "Q42484-1", "record_type": "protein", "filter_code": "0000000.0100101.010000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q42510-1", "uniprot_id": [ { "id": "GNOM_ARATH", "url": "https://www.uniprot.org/uniprot/Q42510", "type": "external" } ], "mass": 162619.0, "length": 1451, "protein_name": "ARF guanine-nucleotide exchange factor GNOM", "gene_name": "GN", "organism": "Arabidopsis", "refseq_name": "sec7 domain-containing protein", "refseq_ac": [ { "id": "NP_001184991", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001184991", "type": "external" } ], "gene_names_uniprotkb": "GN; EMB30; F16A14.20; F7A19.7; GBF3; MIZ2; VAN7", "gene_names_refseq": "EMB30; EMBRYO DEFECTIVE 30; F16A14.20; GNOM; GN; VAN7; VASCULAR NETWORK 7", "protein_names_uniprotkb": "ARF guanine-nucleotide exchange factor GNOM; Pattern formation protein EMB30; Protein EMBRYO DEFECTIVE 30; Protein MIZU-KUSSEI2; Protein VASCULAR NETWORK 7", "protein_names_refseq": "sec7 domain-containing protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G13980)", "pathway_count": 1, "publication_count": 22, "publication_id_list": "10514379;10715321;10887076;11090208;11130712;12553910;12878008;14681187;14742722;17653190;18203920;18394892;20036441;21118984;21138974;21569134;23660473;25561503;27862469;29654922;8020095;8628228", "class_list": "", "function": "Activates the ARF proteins by exchanging bound GDP for free GTP. Plays a role in vesicular protein sorting. Acts as the major regulator of endosomal vesicle trafficking but is also involved in the endocytosis process. Could function redundantly with GNL1 in the retrograde Golgi to endoplasmic reticulum trafficking. Regulates vesicle trafficking required for the coordinated polar localization of auxin efflux carriers which in turn determines the direction of auxin flow. Mediates the sorting of PIN1 from endosomal compartments to the basal plasma membrane and the polarization of PIN3 to the bottom side of hypocotyl endodermal cells. Involved in the specification of apical-basal pattern formation in the early embryo and during root formation. Required for correct cell wall organization leading to normal cell adhesion during seedling development. Also plays an essential role in hydrotropism of seedling roots., [UniProtKB, PubMed, PubMed, UniProtKB, PubMed, PubMed, PubMed, PubMed, UniProtKB, UniProtKB, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 3, "reported_mutagensis": 5, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q38883;Q56ZY3", "ec_number_list": [], "go_molecular_function": "GO:0042802 identical protein binding;GO:0042803 protein homodimerization activity;GO:0005085 guanyl-nucleotide exchange factor activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005768 endosome;GO:0005829 cytosol;GO:0005886 plasma membrane;GO:0010008 endosome membrane", "go_biological_process": "GO:0070417 cellular response to cold;GO:0006897 endocytosis;GO:0007155 cell adhesion;GO:0015031 protein transport;GO:0016192 vesicle-mediated transport", "synthesized_glycan_count": 0, "hit_score": 2.3, "record_id": "Q42510-1", "record_type": "protein", "filter_code": "0000000.0100101.010000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q42521-1", "uniprot_id": [ { "id": "DCE1_ARATH", "url": "https://www.uniprot.org/uniprot/Q42521", "type": "external" } ], "mass": 57066.0, "length": 502, "protein_name": "Glutamate decarboxylase 1", "gene_name": "GAD1", "organism": "Arabidopsis", "refseq_name": "glutamate decarboxylase", "refseq_ac": [ { "id": "NP_197235", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_197235", "type": "external" } ], "gene_names_uniprotkb": "GAD1; GAD; GDH1; MKP11.30; MKP11_18", "gene_names_refseq": "GAD1; GAD; GLUTAMATE DECARBOXYLASE 1; GLUTAMATE DECARBOXYLASE; MKP11.30; MKP11_30; glutamate decarboxylase", "protein_names_uniprotkb": "Glutamate decarboxylase 1; 4.1.1.15; GAD 1", "protein_names_refseq": "glutamate decarboxylase", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G17330)", "pathway_count": 1, "publication_count": 22, "publication_id_list": "14593172;15604684;18077464;18463617;19580813;20122158;20466843;22438062;23172892;23328941;23572148;23820729;24601666;26187819;27419465;27862469;29167316;30833711;7610159;9330910;9700069;9701597", "class_list": "", "function": "Catalyzes the conversion of glutamate to 4-aminobutanoate (GABA). The calmodulin-binding is calcium-dependent and it is proposed to directly or indirectly form a calcium regulated control of GABA biosynthesis., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 5, "reported_mutagensis": 5, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9FFH9", "ec_number_list": [ { "id": "4.1.1.15", "url": "https://www.rhea-db.org/rhea/?query=ec:4.1.1.15", "type": "external" } ], "go_molecular_function": "GO:0060090 molecular adaptor activity;GO:0005516 calmodulin binding;GO:0030170 pyridoxal phosphate binding;GO:0004351 glutamate decarboxylase activity", "go_cellular_component": "GO:0005829 cytosol", "go_biological_process": "GO:0006538 L-glutamate catabolic process", "synthesized_glycan_count": 0, "hit_score": 2.3, "record_id": "Q42521-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q42523-1", "uniprot_id": [ { "id": "MCCA_ARATH", "url": "https://www.uniprot.org/uniprot/Q42523", "type": "external" } ], "mass": 80451.0, "length": 734, "protein_name": "Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial", "gene_name": "MCCA", "organism": "Arabidopsis", "refseq_name": "methylcrotonyl-CoA carboxylase alpha chain", "refseq_ac": [ { "id": "NP_563674", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_563674", "type": "external" } ], "gene_names_uniprotkb": "MCCA; F10O3.9; F10O3_8", "gene_names_refseq": "MCCA", "protein_names_uniprotkb": "Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial; 3-methylcrotonyl-CoA carboxylase 1; 3-methylcrotonyl-CoA:carbon dioxide ligase subunit alpha; 6.4.1.4; MCCase subunit alpha", "protein_names_refseq": "methylcrotonyl-CoA carboxylase alpha chain", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G03090)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "10681539;11130712;14593172;19376835;21768351;25561503;27862469;30833711;7716229", "class_list": "", "function": "Biotin-attachment subunit of the 3-methylcrotonyl-CoA carboxylase, an enzyme that catalyzes the conversion of 3-methylcrotonyl-CoA to 3-methylglutaconyl-CoA, a critical step for leucine and isovaleric acid catabolism., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9SA61", "ec_number_list": [ { "id": "6.4.1.4", "url": "https://www.rhea-db.org/rhea/?query=ec:6.4.1.4", "type": "external" } ], "go_molecular_function": "GO:0005524 ATP binding;GO:0050897 cobalt ion binding;GO:0004485 methylcrotonoyl-CoA carboxylase activity", "go_cellular_component": "GO:0005576 extracellular region;GO:0005739 mitochondrion;GO:0005759 mitochondrial matrix;GO:0022626 cytosolic ribosome", "go_biological_process": "GO:0006552 L-leucine catabolic process", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "Q42523-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q42525-1", "uniprot_id": [ { "id": "HXK1_ARATH", "url": "https://www.uniprot.org/uniprot/Q42525", "type": "external" } ], "mass": 53707.0, "length": 496, "protein_name": "Hexokinase-1", "gene_name": "HXK1", "organism": "Arabidopsis", "refseq_name": "hexokinase 1", "refseq_ac": [ { "id": "NP_194642", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_194642", "type": "external" } ], "gene_names_uniprotkb": "HXK1; F19B15.160; GIN2", "gene_names_refseq": "ARABIDOPSIS THALIANA HEXOKINASE 1; ATHXK1; F19B15.160; F19B15_160; GIN2; GLUCOSE INSENSITIVE 2; HEXOKINASE; HXK1; hexokinase 1", "protein_names_uniprotkb": "Hexokinase-1; 2.7.1.1; Protein GLUCOSE INSENSITIVE 2", "protein_names_refseq": "hexokinase 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G29130)", "pathway_count": 1, "publication_count": 18, "publication_id_list": "10617198;12690200;14593172;14671022;16920781;17081979;25561503;25664748;26528314;27862469;28011693;28390076;29654922;30511331;34155329;35394700;7610198;9014361", "class_list": "", "function": "Fructose and glucose phosphorylating enzyme (PubMed:7610198). May be involved in the phosphorylation of glucose during the export from mitochondrion to cytosol (PubMed:16920781). Acts as a sugar sensor which may regulate sugar-dependent gene repression or activation (PubMed:12690200, PubMed:26528314, PubMed:9014361). Mediates the effects of sugar on plant growth and development independently of its catalytic activity or the sugar metabolism (PubMed:12690200, PubMed:9014361). May regulate the execution of program cell death in plant cells (PubMed:16920781). Promotes roots and leaves growth (PubMed:26528314). Together with sugar, is involved in the regulation of the expression of aquaporin genes, and reduces leaf water conductance, to coordinate sugar levels with the loss of water through transpiration (PubMed:28390076). Regulates cell proliferation and expansion early during leaf development (PubMed:30511331). Involved in sucrose-induced leaf growth stimulation independently of GPT2 (PubMed:30511331). May participate to the stimulation of hypocotyl elongation under long-day (LD) conditions (PubMed:34155329). Forms a nuclear complex with CLF and EZA1/SWN to target common glucose-responsive genes and regulate glucose signaling (PubMed:35394700). Is required for CLF- and EZA1/SWN-mediated histone H3 trimethylation on 'Lys-27' (H3K27me3) and glucose-mediated gene repression (PubMed:35394700)., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 6, "reported_mutagensis": 3, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q42535", "ec_number_list": [ { "id": "2.7.1.4", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.4", "type": "external" }, { "id": "2.7.1.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.1", "type": "external" }, { "id": "2.7.1.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.-", "type": "external" } ], "go_molecular_function": "GO:0004340 glucokinase activity;GO:0008865 fructokinase activity;GO:0005524 ATP binding;GO:0008270 zinc ion binding;GO:0001046 core promoter sequence-specific DNA binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005739 mitochondrion;GO:0005741 mitochondrial outer membrane;GO:0005829 cytosol;GO:0032991 protein-containing complex", "go_biological_process": "GO:0006357 regulation of transcription by RNA polymerase II;GO:0006006 glucose metabolic process;GO:0001678 intracellular glucose homeostasis;GO:0006096 glycolytic process;GO:0012501 programmed cell death", "synthesized_glycan_count": 0, "hit_score": 1.9, "record_id": "Q42525-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q42529-1", "uniprot_id": [ { "id": "TRPA2_ARATH", "url": "https://www.uniprot.org/uniprot/Q42529", "type": "external" } ], "mass": 33200.0, "length": 312, "protein_name": "Tryptophan synthase alpha chain, chloroplastic", "gene_name": "TSA1", "organism": "Arabidopsis", "refseq_name": "tryptophan synthase alpha chain", "refseq_ac": [ { "id": "NP_567004", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_567004", "type": "external" } ], "gene_names_uniprotkb": "TSA1; T14E10.210; TRP3; TSA2", "gene_names_refseq": "TRP3; TRYPTOPHAN SYNTHASE ALPHA CHAIN; TRYPTOPHAN-REQUIRING 3; TSA1; tryptophan synthase alpha chain", "protein_names_uniprotkb": "Tryptophan synthase alpha chain, chloroplastic; 4.1.2.8; 4.2.1.20; Indole-3-glycerol-phosphate lyase, chloroplastic; Protein TRYPTOPHAN-REQUIRING 3", "protein_names_refseq": "tryptophan synthase alpha chain", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G54640)", "pathway_count": 1, "publication_count": 11, "publication_id_list": "11069706;11130713;18375600;18431481;18844775;23820729;27862469;7476868;7890741;9003322;9839461", "class_list": "", "function": "The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Required for tryptophan biosynthesis. Contributes to the tryptophan-independent indole biosynthesis, and possibly to auxin production., [UniProtKB, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q0WWE0;Q8LA83", "ec_number_list": [ { "id": "4.2.1.20", "url": "https://www.rhea-db.org/rhea/?query=ec:4.2.1.20", "type": "external" }, { "id": "4.1.2.8", "url": "https://www.rhea-db.org/rhea/?query=ec:4.1.2.8", "type": "external" } ], "go_molecular_function": "GO:0004834 tryptophan synthase activity;GO:0033984 indole-3-glycerol-phosphate lyase activity", "go_cellular_component": "GO:0005829 cytosol;GO:0009507 chloroplast;GO:0009570 chloroplast stroma", "go_biological_process": "GO:0042742 defense response to bacterium;GO:0000162 L-tryptophan biosynthetic process;GO:0009630 gravitropism;GO:0009851 auxin biosynthetic process;GO:0052544 defense response by callose deposition in cell wall", "synthesized_glycan_count": 0, "hit_score": 1.2, "record_id": "Q42529-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q42536-1", "uniprot_id": [ { "id": "PORA_ARATH", "url": "https://www.uniprot.org/uniprot/Q42536", "type": "external" } ], "mass": 43863.0, "length": 405, "protein_name": "Protochlorophyllide reductase A, chloroplastic", "gene_name": "PORA", "organism": "Arabidopsis", "refseq_name": "protochlorophyllide oxidoreductase A", "refseq_ac": [ { "id": "NP_001032072", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001032072", "type": "external" } ], "gene_names_uniprotkb": "PORA; K18G13.7", "gene_names_refseq": "K18G13.7; K18G13_7; PORA; protochlorophyllide oxidoreductase A", "protein_names_uniprotkb": "Protochlorophyllide reductase A, chloroplastic; 1.3.1.33; NADPH-protochlorophyllide oxidoreductase A; PCR A; POR A", "protein_names_refseq": "protochlorophyllide oxidoreductase A", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G54190)", "pathway_count": 1, "publication_count": 11, "publication_id_list": "11785941;14593172;15773849;15842619;19423640;20012672;22278767;25901327;27862469;7659751;9734815", "class_list": "", "function": "Phototransformation of protochlorophyllide (Pchlide) to chlorophyllide (Chlide). PORA may also function as a photoprotectant during the transitory stage from dark to light. Functions in skotomorphogenesis, photomorphogenesis and throughout the plant life under specific light conditions., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "B9DGY6;Q9FK22", "ec_number_list": [ { "id": "1.3.1.33", "url": "https://www.rhea-db.org/rhea/?query=ec:1.3.1.33", "type": "external" } ], "go_molecular_function": "GO:0003729 mRNA binding;GO:0016630 protochlorophyllide reductase activity", "go_cellular_component": "GO:0009507 chloroplast;GO:0009534 chloroplast thylakoid;GO:0009941 chloroplast envelope", "go_biological_process": "GO:0009640 photomorphogenesis;GO:0009647 skotomorphogenesis;GO:0009723 response to ethylene;GO:0015979 photosynthesis;GO:0015995 chlorophyll biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 1.2, "record_id": "Q42536-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q42545-1", "uniprot_id": [ { "id": "FTSZ1_ARATH", "url": "https://www.uniprot.org/uniprot/Q42545", "type": "external" } ], "mass": 45565.0, "length": 433, "protein_name": "Cell division protein FtsZ homolog 1, chloroplastic", "gene_name": "FTSZ1", "organism": "Arabidopsis", "refseq_name": "homolog of bacterial cytokinesis Z-ring protein FTSZ 1-1", "refseq_ac": [ { "id": "NP_200339", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_200339", "type": "external" } ], "gene_names_uniprotkb": "FTSZ1; ARC10; FTSZ1-1; MCO15.23; PMI4", "gene_names_refseq": "ARABIDOPSIS THALIANA HOMOLOG OF BACTERIAL CYTOKINESIS Z-RING PROTEIN FTSZ 1-1; ATFTSZ1-1; CHLOROPLAST FTSZ; CPFTSZ; FTSZ1-1; MCO15.23; MCO15_23; homolog of bacterial cytokinesis Z-ring protein FTSZ 1-1", "protein_names_uniprotkb": "Cell division protein FtsZ homolog 1, chloroplastic; AtFtsZ1-1; AtFtsZ1; Chloroplast FtsZ; CpFtsZ; Protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 10; Protein PLASTID MOVEMENT IMPAIRED4", "protein_names_refseq": "homolog of bacterial cytokinesis Z-ring protein FTSZ 1-1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G55280)", "pathway_count": 1, "publication_count": 30, "publication_id_list": "10213777;11115884;11285278;11743110;14593172;16113226;16146521;17304239;17468127;17725544;18204083;18284374;18431481;19403522;19925792;20195657;20421292;22223895;22823492;25731613;26500667;27322658;27862469;29654922;29920253;29967285;30824505;7637778;9628582;9836740", "class_list": "", "function": "Exhibits GTPase activity. Component of the plastid division machinery that forms a contractile ring at the division site (PubMed:25731613). Required for plastid division in a dose-dependent manner. Involved in epidermal plastids division in a MINE1-dependent manner (PubMed:26500667). Involved in blue light-induced chloroplast movements. May regulate thylakoid development. In the vegetative shoot apex, at the shoot apical meristem (SAM), where the proplastid-to-chloroplast transition takes place, contributes equally with FTSZ2-1 in the L2 layer to plastid division (PubMed:29920253)., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 5, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9FLN6", "ec_number_list": [], "go_molecular_function": "GO:0003924 GTPase activity;GO:0005525 GTP binding;GO:0042802 identical protein binding;GO:0042803 protein homodimerization activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005874 microtubule;GO:0070938 contractile ring;GO:0009535 chloroplast thylakoid membrane;GO:0032153 cell division site", "go_biological_process": "GO:0051301 cell division;GO:0009612 response to mechanical stimulus;GO:0007017 microtubule-based process;GO:0009637 response to blue light;GO:0009658 chloroplast organization", "synthesized_glycan_count": 0, "hit_score": 3.1, "record_id": "Q42545-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q42564-1", "uniprot_id": [ { "id": "APX3_ARATH", "url": "https://www.uniprot.org/uniprot/Q42564", "type": "external" } ], "mass": 31572.0, "length": 287, "protein_name": "L-ascorbate peroxidase 3", "gene_name": "APX3", "organism": "Arabidopsis", "refseq_name": "ascorbate peroxidase 3", "refseq_ac": [ { "id": "NP_195226", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_195226", "type": "external" } ], "gene_names_uniprotkb": "APX3; APXIII; APX; M4E13.60", "gene_names_refseq": "APX3; ASCORBATE PEROXIDASE 3; M4E13.60; M4E13_60; ascorbate peroxidase 3", "protein_names_uniprotkb": "L-ascorbate peroxidase 3; 1.11.1.11; AtAPx03", "protein_names_refseq": "ascorbate peroxidase 3", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G35000)", "pathway_count": 1, "publication_count": 11, "publication_id_list": "10617198;14593172;16873450;17951448;20215589;21057222;22223895;27862469;9144965;9290648;9291097", "class_list": "", "function": "Plays a key role in hydrogen peroxide removal., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O81810", "ec_number_list": [ { "id": "1.11.1.11", "url": "https://www.rhea-db.org/rhea/?query=ec:1.11.1.11", "type": "external" } ], "go_molecular_function": "GO:0046872 metal ion binding;GO:0020037 heme binding;GO:0004601 peroxidase activity;GO:0016688 L-ascorbate peroxidase activity", "go_cellular_component": "GO:0005739 mitochondrion;GO:0005777 peroxisome;GO:0005778 peroxisomal membrane;GO:0005886 plasma membrane;GO:0005773 vacuole", "go_biological_process": "GO:0006979 response to oxidative stress;GO:0034599 cellular response to oxidative stress;GO:0000302 response to reactive oxygen species;GO:0042744 hydrogen peroxide catabolic process", "synthesized_glycan_count": 0, "hit_score": 1.2, "record_id": "Q42564-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q42572-1", "uniprot_id": [ { "id": "DNLI1_ARATH", "url": "https://www.uniprot.org/uniprot/Q42572", "type": "external" } ], "mass": 87740.0, "length": 790, "protein_name": "DNA ligase 1", "gene_name": "LIG1", "organism": "Arabidopsis", "refseq_name": "DNA ligase 1", "refseq_ac": [ { "id": "NP_172293", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_172293", "type": "external" } ], "gene_names_uniprotkb": "LIG1; T23G18.1; T6D22.23", "gene_names_refseq": "ATLIG1; DNA ligase 1; LIG1; T6D22.23", "protein_names_uniprotkb": "DNA ligase 1; 6.5.1.1; AtLIG1; DNA ligase I; Polydeoxyribonucleotide synthase [ATP] 1", "protein_names_refseq": "DNA ligase 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G08130)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "11130712;11910074;14593172;16790030;17556508;19558640;20023162;25561503;27862469;9681027", "class_list": "", "function": "Essential protein. DNA ligase that seals nicks in double-stranded DNA during DNA replication, DNA recombination and DNA repair. Involved in repair of both single strand breaks (SSBs) and double strand breaks (DSBs). Required in the endosperm for embryogenesis, probably to repair DNA-breaks generated by DME., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q541Y6;Q56W81;Q9LMZ4;Q9SGE5", "ec_number_list": [], "go_molecular_function": "GO:0003677 DNA binding;GO:0005524 ATP binding;GO:0046872 metal ion binding;GO:0003910 DNA ligase (ATP) activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005730 nucleolus;GO:0005739 mitochondrion", "go_biological_process": "GO:0071897 DNA biosynthetic process;GO:0006273 lagging strand elongation;GO:0006310 DNA recombination;GO:0051301 cell division;GO:0006260 DNA replication", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "Q42572-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q42601-1", "uniprot_id": [ { "id": "CARB_ARATH", "url": "https://www.uniprot.org/uniprot/Q42601", "type": "external" } ], "mass": 129957.0, "length": 1187, "protein_name": "Carbamoyl phosphate synthase arginine-specific large chain, chloroplastic", "gene_name": "CARB", "organism": "Arabidopsis", "refseq_name": "carbamoyl phosphate synthetase B", "refseq_ac": [ { "id": "NP_564338", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_564338", "type": "external" } ], "gene_names_uniprotkb": "CARB; F1N18.6; VEN3", "gene_names_refseq": "CARBAMOYL PHOSPHATE SYNTHETASE LARGE SUBUNIT; CARB; CELLULOSE SYNTHASE LIKE B6; CLSB6; F1N18.6; F1N18_6; VEN3; VENOSA 3; carbamoyl phosphate synthetase B", "protein_names_uniprotkb": "Carbamoyl phosphate synthase arginine-specific large chain, chloroplastic; 6.3.4.16; 6.3.5.5; Ammonium-dependent carbamoyl phosphate synthetase; Arginine-specific carbamoyl phosphate synthetase, ammonia chain; CPSase; CPS; Glutamine-dependent carbamoyl phosphate synthetase; Protein VENOSA 3", "protein_names_refseq": "carbamoyl phosphate synthetase B", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G29900)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "11130712;14593172;15820655;17272265;21265888;22060019;27862469", "class_list": "", "function": "Large subunit of the arginine-specific carbamoyl phosphate synthase (CPSase). CPSase catalyzes the formation of carbamoyl phosphate from the ammonia moiety of glutamine, hydrogencarbonate, and phosphate donated by ATP, constituting the first step of 2 biosynthetic pathways, one leading to arginine and/or urea and the other to pyrimidine nucleotides. The large subunit (synthetase) binds the substrates ammonia (free or transferred from glutamine from the small subunit), hydrogencarbonate and ATP and carries out an ATP-coupled ligase reaction, activating hydrogencarbonate by forming carboxy phosphate which reacts with ammonia to form carbamoyl phosphate. Required for mesophyll development., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 4, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [ { "id": "6.3.4.16", "url": "https://www.rhea-db.org/rhea/?query=ec:6.3.4.16", "type": "external" }, { "id": "6.3.5.5", "url": "https://www.rhea-db.org/rhea/?query=ec:6.3.5.5", "type": "external" } ], "go_molecular_function": "GO:0004087 carbamoyl-phosphate synthase (ammonia) activity;GO:0004088 carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity;GO:0005524 ATP binding;GO:0046872 metal ion binding;GO:0016740 transferase activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005951 carbamoyl-phosphate synthase complex;GO:0009507 chloroplast;GO:0009570 chloroplast stroma", "go_biological_process": "GO:0006526 L-arginine biosynthetic process;GO:0006541 glutamine metabolic process;GO:0006221 pyrimidine nucleotide biosynthetic process;GO:0016036 cellular response to phosphate starvation", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q42601-1", "record_type": "protein", "filter_code": "0000000.0100101.010000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q42605-1", "uniprot_id": [ { "id": "UGE1_ARATH", "url": "https://www.uniprot.org/uniprot/Q42605", "type": "external" } ], "mass": 39158.0, "length": 351, "protein_name": "Bifunctional UDP-glucose 4-epimerase and UDP-xylose 4-epimerase 1", "gene_name": "UGE1", "organism": "Arabidopsis", "refseq_name": "UDP-D-glucose/UDP-D-galactose 4-epimerase 1", "refseq_ac": [ { "id": "NP_172738", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_172738", "type": "external" } ], "gene_names_uniprotkb": "UGE1; F13K23.3", "gene_names_refseq": "A. THALIANA UDP-GLC 4-EPIMERASE 1; ATUGE1; F13K23.3; F13K23_3; UDP-D-glucose/UDP-D-galactose 4-epimerase 1; UGE1", "protein_names_uniprotkb": "Bifunctional UDP-glucose 4-epimerase and UDP-xylose 4-epimerase 1; 5.1.3.2; 5.1.3.5; AtUGE1; UDP-D-xylose 4-epimerase; UDP-L-arabinose 4-epimerase; UDP-galactose 4-epimerase 1; UDP-glucose 4-epimerase 1", "protein_names_refseq": "UDP-D-glucose/UDP-D-galactose 4-epimerase 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G12780)", "pathway_count": 1, "publication_count": 13, "publication_id_list": "11130712;11554483;12419184;14593172;14973160;16644739;17496119;19423640;19754426;25561503;27862469;8615692;9681006", "class_list": "", "function": "Catalyzes the interconversion between UDP-glucose and UDP-galactose and the interconversion between UDP-arabinose and UDP-xylose (PubMed:17496119, PubMed:8615692). Plays a role in D-galactose detoxification., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "B9DI57;Q9LPX1", "ec_number_list": [ { "id": "5.1.3.5", "url": "https://www.rhea-db.org/rhea/?query=ec:5.1.3.5", "type": "external" }, { "id": "5.1.3.2", "url": "https://www.rhea-db.org/rhea/?query=ec:5.1.3.2", "type": "external" }, { "id": "5.1.3.-", "url": "https://www.rhea-db.org/rhea/?query=ec:5.1.3.-", "type": "external" } ], "go_molecular_function": "GO:0003978 UDP-glucose 4-epimerase activity;GO:0050373 UDP-arabinose 4-epimerase activity", "go_cellular_component": "GO:0005829 cytosol;GO:0005886 plasma membrane", "go_biological_process": "GO:0005996 monosaccharide metabolic process;GO:0071555 cell wall organization;GO:0033358 UDP-L-arabinose biosynthetic process;GO:0045227 capsule polysaccharide biosynthetic process;GO:0046369 galactose biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 1.4, "record_id": "Q42605-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q43127-1", "uniprot_id": [ { "id": "GLNA2_ARATH", "url": "https://www.uniprot.org/uniprot/Q43127", "type": "external" } ], "mass": 47411.0, "length": 430, "protein_name": "Glutamine synthetase, chloroplastic/mitochondrial", "gene_name": "GLN2", "organism": "Arabidopsis", "refseq_name": "glutamine synthetase 2", "refseq_ac": [ { "id": "NP_001031969", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001031969", "type": "external" } ], "gene_names_uniprotkb": "GLN2; GSLI; MJE4.9", "gene_names_refseq": "ATGSL1; GLN2; GLUTAMINE SYNTHETASE 2; GLUTAMINE SYNTHETASE LIKE 1; GS2; MJE4.9; MJE4_9; glutamine synthetase 2", "protein_names_uniprotkb": "Glutamine synthetase, chloroplastic/mitochondrial; 6.3.1.2; GS2; Glutamate--ammonia ligase", "protein_names_refseq": "glutamine synthetase 2", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G35630)", "pathway_count": 1, "publication_count": 14, "publication_id_list": "10482686;14593172;15273293;1684022;19376835;21768351;23572148;23660473;23776212;25561503;27862469;29654922;30833711;9734815", "class_list": "", "function": "The light-modulated chloroplast/mitochondrial enzyme, encoded by a nuclear gene and expressed primarily in leaves, is responsible for the reassimilation of the ammonia generated by photorespiration., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 8, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [ { "id": "6.3.1.2", "url": "https://www.rhea-db.org/rhea/?query=ec:6.3.1.2", "type": "external" } ], "go_molecular_function": "GO:0003729 mRNA binding;GO:0005524 ATP binding;GO:0004356 glutamine synthetase activity;GO:1901149 salicylic acid binding", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005739 mitochondrion;GO:0022626 cytosolic ribosome;GO:0009535 chloroplast thylakoid membrane;GO:0009507 chloroplast", "go_biological_process": "GO:0046686 response to cadmium ion;GO:0019676 ammonia assimilation cycle;GO:0006542 glutamine biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 1.5, "record_id": "Q43127-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q43128-1", "uniprot_id": [ { "id": "PMA10_ARATH", "url": "https://www.uniprot.org/uniprot/Q43128", "type": "external" } ], "mass": 104815.0, "length": 947, "protein_name": "ATPase 10, plasma membrane-type", "gene_name": "AHA10", "organism": "Arabidopsis", "refseq_name": "autoinhibited H[+]-ATPase isoform 10", "refseq_ac": [ { "id": "NP_173169", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_173169", "type": "external" } ], "gene_names_uniprotkb": "AHA10; F20D23.4", "gene_names_refseq": "AHA10; F20D23.4; F20D23_4; autoinhibited H(+)-ATPase isoform 10", "protein_names_uniprotkb": "ATPase 10, plasma membrane-type; 7.1.2.1; Proton pump 10", "protein_names_refseq": "autoinhibited H[+]-ATPase isoform 10", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G17260)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "11130712;15821287;23473981;25561503;27862469;7969026", "class_list": "", "function": "The plasma membrane H(+) ATPase of plants and fungi generates a proton gradient that drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses., [UniProtKB]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 6, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [ { "id": "7.1.2.1", "url": "https://www.rhea-db.org/rhea/?query=ec:7.1.2.1", "type": "external" } ], "go_molecular_function": "GO:0008553 P-type proton-exporting transporter activity;GO:0005524 ATP binding;GO:0046872 metal ion binding;GO:0016887 ATP hydrolysis activity;GO:0019829 ATPase-coupled monoatomic cation transmembrane transporter activity", "go_cellular_component": "GO:0005886 plasma membrane;GO:0009506 plasmodesma;GO:0009705 plant-type vacuole membrane", "go_biological_process": "GO:0051453 regulation of intracellular pH;GO:0007033 vacuole organization;GO:0007035 vacuolar acidification;GO:1902600 proton transmembrane transport;GO:0120029 proton export across plasma membrane", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q43128-1", "record_type": "protein", "filter_code": "0000000.0000101.010000.100000000000000000.0000000001001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q43295-1", "uniprot_id": [ { "id": "APK1_ARATH", "url": "https://www.uniprot.org/uniprot/Q43295", "type": "external" } ], "mass": 29787.0, "length": 276, "protein_name": "Adenylyl-sulfate kinase 1, chloroplastic", "gene_name": "APK1", "organism": "Arabidopsis", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "APK1; AKN1; F26C24.11; T6B13.1", "gene_names_refseq": "", "protein_names_uniprotkb": "Adenylyl-sulfate kinase 1, chloroplastic; 2.7.1.25; APS kinase 1; ATP adenosine-5'-phosphosulfate 3'-phosphotransferase 1; Adenosine-5'-phosphosulfate kinase 1", "protein_names_refseq": "", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G14750)", "pathway_count": 1, "publication_count": 14, "publication_id_list": "10617197;11488606;14593172;19304933;19903478;22184237;22631563;22810229;23218016;27862469;7988678;8049272;8066145;9636674", "class_list": "", "function": "Catalyzes the synthesis of activated sulfate. Essential for plant reproduction and viability. Required for the production of glucosinolates., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 6, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q8LES2", "ec_number_list": [ { "id": "2.7.1.25", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.25", "type": "external" } ], "go_molecular_function": "GO:0005524 ATP binding;GO:0042802 identical protein binding;GO:0004020 adenylylsulfate kinase activity", "go_cellular_component": "GO:0009507 chloroplast;GO:0009536 plastid", "go_biological_process": "GO:0016310 phosphorylation;GO:0019344 cysteine biosynthetic process;GO:0070814 hydrogen sulfide biosynthetic process;GO:0000103 sulfate assimilation", "synthesized_glycan_count": 0, "hit_score": 1.5, "record_id": "Q43295-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q43309-1", "uniprot_id": [ { "id": "1A14_ARATH", "url": "https://www.uniprot.org/uniprot/Q43309", "type": "external" } ], "mass": 53795.0, "length": 474, "protein_name": "1-aminocyclopropane-1-carboxylate synthase 4", "gene_name": "ACS4", "organism": "Arabidopsis", "refseq_name": "1-aminocyclopropane-1-carboxylate synthase 4", "refseq_ac": [ { "id": "NP_179866", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_179866", "type": "external" } ], "gene_names_uniprotkb": "ACS4; ACC4; T20K9.2", "gene_names_refseq": "1-AMINOCYCLOPROPANE-1-CARBOXYLATE SYNTHASE; 1-AMINOCYCLOPROPANE-1-CARBOXYLIC ACID SYNTHASE POLYPEPTIDE; 1-aminocyclopropane-1-carboxylate synthase 4; ACC4; ACS4; ATACS4; T30L20.7", "protein_names_uniprotkb": "1-aminocyclopropane-1-carboxylate synthase 4; 4.4.1.14; ACC synthase 4; S-adenosyl-L-methionine methylthioadenosine-lyase 4", "protein_names_refseq": "1-aminocyclopropane-1-carboxylate synthase 4", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G22810)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "10617197;12968022;1438312;14593172;18808454;20511490;27862469;7642574", "class_list": "", "function": "1-aminocyclopropane-1-carboxylate synthase (ACS) enzymes catalyze the conversion of S-adenosyl-L-methionine (SAM) into 1-aminocyclopropane-1-carboxylate (ACC), a direct precursor of ethylene., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9S9C4", "ec_number_list": [ { "id": "4.4.1.14", "url": "https://www.rhea-db.org/rhea/?query=ec:4.4.1.14", "type": "external" } ], "go_molecular_function": "GO:0030170 pyridoxal phosphate binding;GO:0042802 identical protein binding;GO:0008483 transaminase activity;GO:0016847 1-aminocyclopropane-1-carboxylate synthase activity", "go_cellular_component": "GO:0005737 cytoplasm", "go_biological_process": "GO:0006520 amino acid metabolic process;GO:0009693 ethylene biosynthetic process;GO:0009733 response to auxin;GO:0009835 fruit ripening", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "Q43309-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q43316-1", "uniprot_id": [ { "id": "HEM3_ARATH", "url": "https://www.uniprot.org/uniprot/Q43316", "type": "external" } ], "mass": 41043.0, "length": 382, "protein_name": "Porphobilinogen deaminase, chloroplastic", "gene_name": "HEMC", "organism": "Arabidopsis", "refseq_name": "hydroxymethylbilane synthase", "refseq_ac": [ { "id": "NP_196445", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_196445", "type": "external" } ], "gene_names_uniprotkb": "HEMC; F8L15_10; RUG1", "gene_names_refseq": "F8L15.10; F8L15_10; HEMC; PORPHOBILINOGEN DEAMINASE; RUG1; RUGOSA 1; hydroxymethylbilane synthase", "protein_names_uniprotkb": "Porphobilinogen deaminase, chloroplastic; 2.5.1.61; HMBS; Hydroxymethylbilane synthase; PBG; Pre-uroporphyrinogen synthase; Protein RUGOSA1", "protein_names_refseq": "hydroxymethylbilane synthase", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G08280)", "pathway_count": 1, "publication_count": 11, "publication_id_list": "11130714;14593172;19376835;23308205;23519422;23572148;25561503;27862469;28011693;8000000;8192681", "class_list": "", "function": "Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 5, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q8LBT0", "ec_number_list": [ { "id": "2.5.1.61", "url": "https://www.rhea-db.org/rhea/?query=ec:2.5.1.61", "type": "external" } ], "go_molecular_function": "GO:0004418 hydroxymethylbilane synthase activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005886 plasma membrane;GO:0009507 chloroplast;GO:0009570 chloroplast stroma;GO:0009941 chloroplast envelope", "go_biological_process": "GO:0006779 porphyrin-containing compound biosynthetic process;GO:0006783 heme biosynthetic process;GO:0006782 protoporphyrinogen IX biosynthetic process;GO:0015995 chlorophyll biosynthetic process;GO:1900865 chloroplast RNA modification", "synthesized_glycan_count": 0, "hit_score": 1.2, "record_id": "Q43316-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q43386-1", "uniprot_id": [ { "id": "HMGYA_ARATH", "url": "https://www.uniprot.org/uniprot/Q43386", "type": "external" } ], "mass": 22011.0, "length": 204, "protein_name": "HMG-Y-related protein A", "gene_name": "HMGA", "organism": "Arabidopsis", "refseq_name": "high mobility group A", "refseq_ac": [ { "id": "NP_172943", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_172943", "type": "external" } ], "gene_names_uniprotkb": "HMGA; F10B6.31", "gene_names_refseq": "F10B6.31; F10B6_31; HMGA; high mobility group A", "protein_names_uniprotkb": "HMG-Y-related protein A; AtHMGA; High mobility group A protein", "protein_names_refseq": "high mobility group A", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G14900)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "11130712;14593172;17114349;17316617;19423640;25561503;27862469;9225863", "class_list": "", "function": "Binds A/T-rich DNA with a highly dynamic distribution into the nucleus., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 2, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "P92954;Q8LGC1", "ec_number_list": [], "go_molecular_function": "GO:0003677 DNA binding;GO:0003690 double-stranded DNA binding;GO:0031492 nucleosomal DNA binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005730 nucleolus;GO:0000786 nucleosome;GO:0009507 chloroplast", "go_biological_process": "GO:0006355 regulation of DNA-templated transcription;GO:0006334 nucleosome assembly;GO:0030261 chromosome condensation;GO:0045910 negative regulation of DNA recombination", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "Q43386-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q43387-1", "uniprot_id": [ { "id": "PER71_ARATH", "url": "https://www.uniprot.org/uniprot/Q43387", "type": "external" } ], "mass": 34890.0, "length": 328, "protein_name": "Peroxidase 71", "gene_name": "PER71", "organism": "Arabidopsis", "refseq_name": "Peroxidase superfamily protein", "refseq_ac": [ { "id": "NP_201217", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_201217", "type": "external" } ], "gene_names_uniprotkb": "PER71; MHJ24.10; P71", "gene_names_refseq": "AtPRX71; MHJ24.10; MHJ24_10; PRX71; peroxidase 71", "protein_names_uniprotkb": "Peroxidase 71; 1.11.1.7; ATP15a; ATPO2; Atperox P71", "protein_names_refseq": "Peroxidase superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G64120)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "11027363;11118138;12034502;12068110;14593172;27862469;9501997;9738941;9838086", "class_list": "", "function": "Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress. These functions might be dependent on each isozyme/isoform in each plant tissue., [UniProtKB]", "predicted_glycosites": 2, "predicted_n_glycosites": 2, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 2, "binding_glycan_count": 0, "secondary_ac_list": "Q9SBA0", "ec_number_list": [ { "id": "1.11.1.7", "url": "https://www.rhea-db.org/rhea/?query=ec:1.11.1.7", "type": "external" }, { "id": "3.1.3.2", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.2", "type": "external" } ], "go_molecular_function": "GO:0046872 metal ion binding;GO:0020037 heme binding;GO:0004601 peroxidase activity;GO:0140825 lactoperoxidase activity", "go_cellular_component": "GO:0099503 secretory vesicle;GO:0005576 extracellular region;GO:0010494 cytoplasmic stress granule;GO:0009505 plant-type cell wall;GO:0048046 apoplast", "go_biological_process": "GO:0006979 response to oxidative stress;GO:0048511 rhythmic process;GO:0006950 response to stress;GO:0042744 hydrogen peroxide catabolic process;GO:0050832 defense response to fungus", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "Q43387-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000010000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q43727-1", "uniprot_id": [ { "id": "G6PD1_ARATH", "url": "https://www.uniprot.org/uniprot/Q43727", "type": "external" } ], "mass": 65428.0, "length": 576, "protein_name": "Glucose-6-phosphate 1-dehydrogenase 1, chloroplastic", "gene_name": "G6PD1", "organism": "Arabidopsis", "refseq_name": "glucose-6-phosphate dehydrogenase 1", "refseq_ac": [ { "id": "NP_198428", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_198428", "type": "external" } ], "gene_names_uniprotkb": "G6PD1; APG1; MIK22.2; MWP19.3", "gene_names_refseq": "G6PD1; MWP19.3; glucose-6-phosphate dehydrogenase 1", "protein_names_uniprotkb": "Glucose-6-phosphate 1-dehydrogenase 1, chloroplastic; 1.1.1.49; AtG6PD1; G6PDH1", "protein_names_refseq": "glucose-6-phosphate dehydrogenase 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G35790)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "10437832;14593172;15634201;21309870;27862469;9330910", "class_list": "", "function": "Catalyzes the rate-limiting step of the oxidative pentose-phosphate pathway, which represents a route for the dissimilation of carbohydrates besides glycolysis (PubMed:15634201). The main function of this enzyme is to provide reducing power (NADPH) and pentose phosphates for fatty acid and nucleic acid synthesis which are involved in membrane synthesis and cell division (PubMed:15634201)., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 3, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O65577;Q9FFM5", "ec_number_list": [ { "id": "1.1.1.49", "url": "https://www.rhea-db.org/rhea/?query=ec:1.1.1.49", "type": "external" } ], "go_molecular_function": "GO:0004345 glucose-6-phosphate dehydrogenase activity;GO:0050661 NADP binding", "go_cellular_component": "GO:0005777 peroxisome;GO:0009507 chloroplast;GO:0009570 chloroplast stroma", "go_biological_process": "GO:0009051 pentose-phosphate shunt, oxidative branch;GO:0006006 glucose metabolic process", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q43727-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q43735-1", "uniprot_id": [ { "id": "PER27_ARATH", "url": "https://www.uniprot.org/uniprot/Q43735", "type": "external" } ], "mass": 34950.0, "length": 321, "protein_name": "Peroxidase 27", "gene_name": "PER27", "organism": "Arabidopsis", "refseq_name": "Peroxidase superfamily protein", "refseq_ac": [ { "id": "NP_186768", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_186768", "type": "external" } ], "gene_names_uniprotkb": "PER27; P27; T4P13.12", "gene_names_refseq": "T4P13.12; T4P13_12", "protein_names_uniprotkb": "Peroxidase 27; 1.11.1.7; ATP12a; Atperox P27; PRXR7", "protein_names_refseq": "Peroxidase superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G01190)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "11130713;12034502;12172015;14593172;27862469;9738941;9807821", "class_list": "", "function": "Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress. These functions might be dependent on each isozyme/isoform in each plant tissue., [UniProtKB]", "predicted_glycosites": 2, "predicted_n_glycosites": 2, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 2, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [ { "id": "1.11.1.7", "url": "https://www.rhea-db.org/rhea/?query=ec:1.11.1.7", "type": "external" }, { "id": "3.1.3.2", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.2", "type": "external" } ], "go_molecular_function": "GO:0046872 metal ion binding;GO:0020037 heme binding;GO:0004601 peroxidase activity;GO:0140825 lactoperoxidase activity", "go_cellular_component": "GO:0005576 extracellular region;GO:0009505 plant-type cell wall", "go_biological_process": "GO:0006979 response to oxidative stress;GO:0006950 response to stress;GO:0042744 hydrogen peroxide catabolic process", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q43735-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000010000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q43872-1", "uniprot_id": [ { "id": "PER64_ARATH", "url": "https://www.uniprot.org/uniprot/Q43872", "type": "external" } ], "mass": 34706.0, "length": 317, "protein_name": "Peroxidase 64", "gene_name": "PER64", "organism": "Arabidopsis", "refseq_name": "Peroxidase superfamily protein", "refseq_ac": [ { "id": "NP_199033", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_199033", "type": "external" } ], "gene_names_uniprotkb": "PER64; MJC20.29; P64", "gene_names_refseq": "MJC20.29; MJC20_29; PER64; peroxidase 64", "protein_names_uniprotkb": "Peroxidase 64; 1.11.1.7; ATP17a; Atperox P64; PRXR4", "protein_names_refseq": "Peroxidase superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G42180)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "10470850;12034502;12172015;14593172;20466843;23776212;27862469;8425063;9738941", "class_list": "", "function": "Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress. These functions might be dependent on each isozyme/isoform in each plant tissue., [UniProtKB]", "predicted_glycosites": 2, "predicted_n_glycosites": 1, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 2, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [ { "id": "1.11.1.7", "url": "https://www.rhea-db.org/rhea/?query=ec:1.11.1.7", "type": "external" }, { "id": "3.1.3.2", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.2", "type": "external" } ], "go_molecular_function": "GO:0046872 metal ion binding;GO:0020037 heme binding;GO:0004601 peroxidase activity;GO:0140825 lactoperoxidase activity", "go_cellular_component": "GO:0005576 extracellular region;GO:0009505 plant-type cell wall", "go_biological_process": "GO:0006979 response to oxidative stress;GO:0006950 response to stress;GO:0042744 hydrogen peroxide catabolic process", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "Q43872-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000011001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q4KSH9-1", "uniprot_id": [ { "id": "BARS_ARATH", "url": "https://www.uniprot.org/uniprot/Q4KSH9", "type": "external" } ], "mass": 64909.0, "length": 557, "protein_name": "Alpha-barbatene synthase", "gene_name": "BS", "organism": "Arabidopsis", "refseq_name": "Terpenoid cyclases/Protein prenyltransferases superfamily protein", "refseq_ac": [ { "id": "NP_199276", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_199276", "type": "external" } ], "gene_names_uniprotkb": "BS; K15C23.7; TPS11", "gene_names_refseq": "K15C23.7; K15C23_7", "protein_names_uniprotkb": "Alpha-barbatene synthase; (-)-beta-bisabolene synthase; (E)-beta-farnesene synthase; 4.2.3.123; 4.2.3.47; 4.2.3.55; 4.2.3.65; 4.2.3.69; 4.2.3.78; 4.2.3.79; 4.2.3.95; Alpha-cuprenene synthase; Alpha-zingiberene synthase; AtBS; AtTPS11; Beta-chamigrene synthase; Beta-sesquiphellandrene synthase; Terpeneoid synthase 11; Thujopsene synthase", "protein_names_refseq": "Terpenoid cyclases/Protein prenyltransferases superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G44630)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "12207221;12566586;12777052;15918888;15965019;19253305;27862469", "class_list": "", "function": "Involved in the biosynthesis of over 15 sesquiterpenes (C15). The major products are (+)-alpha-barbatene (27.3%), (+)-thujopsene (17.8%) and (+)-beta-chamigrene (9.9%). Can use farnesyl diphosphate or geranyl diphosphate as substrates, but not geranylgeranyl diphosphate., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A3KPF7;Q9LU03", "ec_number_list": [ { "id": "4.2.3.47", "url": "https://www.rhea-db.org/rhea/?query=ec:4.2.3.47", "type": "external" }, { "id": "4.2.3.69", "url": "https://www.rhea-db.org/rhea/?query=ec:4.2.3.69", "type": "external" }, { "id": "4.2.3.78", "url": "https://www.rhea-db.org/rhea/?query=ec:4.2.3.78", "type": "external" }, { "id": "4.2.3.79", "url": "https://www.rhea-db.org/rhea/?query=ec:4.2.3.79", "type": "external" }, { "id": "4.2.3.123", "url": "https://www.rhea-db.org/rhea/?query=ec:4.2.3.123", "type": "external" }, { "id": "4.2.3.55", "url": "https://www.rhea-db.org/rhea/?query=ec:4.2.3.55", "type": "external" }, { "id": "4.2.3.65", "url": "https://www.rhea-db.org/rhea/?query=ec:4.2.3.65", "type": "external" }, { "id": "4.2.3.95", "url": "https://www.rhea-db.org/rhea/?query=ec:4.2.3.95", "type": "external" } ], "go_molecular_function": "GO:0000287 magnesium ion binding;GO:0010333 terpene synthase activity;GO:0102878 (+)-alpha-barbatene synthase activity;GO:0102879 (+)-thujopsene synthase activity;GO:0009975 cyclase activity", "go_cellular_component": "GO:0009506 plasmodesma;GO:0009507 chloroplast", "go_biological_process": "GO:0051762 sesquiterpene biosynthetic process;GO:0016102 diterpenoid biosynthetic process;GO:0016106 sesquiterpenoid biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q4KSH9-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q4TU14-1", "uniprot_id": [ { "id": "RHF1A_ARATH", "url": "https://www.uniprot.org/uniprot/Q4TU14", "type": "external" } ], "mass": 40284.0, "length": 371, "protein_name": "E3 ubiquitin-protein ligase RHF1A", "gene_name": "RHF1A", "organism": "Arabidopsis", "refseq_name": "RING-H2 group F1A", "refseq_ac": [ { "id": "NP_193158", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_193158", "type": "external" } ], "gene_names_uniprotkb": "RHF1A; FCAALL.146; dl3150w", "gene_names_refseq": "DL3150W; FCAALL.146; RHF1A; RING-H2 group F1A", "protein_names_uniprotkb": "E3 ubiquitin-protein ligase RHF1A; 2.3.2.27; RING-H2 finger F1a; RING-H2 zinc finger protein RHF1a; RING-type E3 ubiquitin transferase RHF1A", "protein_names_refseq": "RING-H2 group F1A", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G14220)", "pathway_count": 1, "publication_count": 11, "publication_id_list": "10617198;11910074;15644464;18552199;23111157;25561503;27862469;28011693;29654922;9461215;9781696", "class_list": "", "function": "E3 ubiquitin-protein ligase involved in the positive regulation of the gametogenesis progression. Mediates the proteasomal degradation of KRP6, a cyclin-dependent kinase inhibitor which accumulates during meiosis and blocks the progression of subsequent mitoses during gametophyte development. Functions in association with RHF2A (PubMed:18552199). Possesses E3 ubiquitin-protein ligase activity when associated with the E2 enzyme UBC8 in vitro (PubMed:15644464)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 4, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O23280;Q8GXY4;Q9ZT43", "ec_number_list": [], "go_molecular_function": "GO:0008270 zinc ion binding;GO:0061630 ubiquitin protein ligase activity;GO:0004842 ubiquitin-protein transferase activity", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0016567 protein ubiquitination;GO:0010498 proteasomal protein catabolic process;GO:0051726 regulation of cell cycle;GO:0009561 megagametogenesis;GO:0055046 microgametogenesis", "synthesized_glycan_count": 0, "hit_score": 1.2, "record_id": "Q4TU14-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q4V398-1", "uniprot_id": [ { "id": "RRT1_ARATH", "url": "https://www.uniprot.org/uniprot/Q4V398", "type": "external" } ], "mass": 59041.0, "length": 508, "protein_name": "Rhamnogalacturonan I rhamnosyltransferase 1", "gene_name": "RRT1", "organism": "Arabidopsis", "refseq_name": "O-fucosyltransferase family protein", "refseq_ac": [ { "id": "NP_197078", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_197078", "type": "external" } ], "gene_names_uniprotkb": "RRT1; F14F8.120; OFUT34", "gene_names_refseq": "F14F8.120; F14F8_120", "protein_names_uniprotkb": "Rhamnogalacturonan I rhamnosyltransferase 1; 2.4.1.351; O-FucT-34; O-fucosyltransferase 34; O-fucosyltransferase family protein", "protein_names_refseq": "O-fucosyltransferase family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G15740)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "11130714;22629278;22916179;22966747;23272088;24905498;27862469;30082766", "class_list": "glycogene;glycosyltransferase", "function": "Glycosyltransferase involved in the formation of rhamnogalacturonan I (RG-I) oligosaccharides in the seed coat mucilage, which is a specialized cell wall with abundant RG-I (PubMed:30082766). Transfers the rhamnose residue from UDP-beta-L-rhamnose to RG-I oligosaccharides (PubMed:30082766). Prefers RG-I oligosaccharides with a degree of polymerization of 5 or larger than 5 (PubMed:30082766). Does not act on oligosaccharides with a degree of polymerization of 4 or smaller than 4 (PubMed:30082766). Does not require metal ions for its activity (PubMed:30082766)., [UniProtKB, PubMed]", "predicted_glycosites": 4, "predicted_n_glycosites": 4, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 4, "binding_glycan_count": 0, "secondary_ac_list": "Q9LFV2", "ec_number_list": [ { "id": "2.4.1.351", "url": "https://www.rhea-db.org/rhea/?query=ec:2.4.1.351", "type": "external" } ], "go_molecular_function": "GO:0008194 UDP-glycosyltransferase activity", "go_cellular_component": "GO:0000139 Golgi membrane;GO:0005737 cytoplasm", "go_biological_process": "GO:0006004 fucose metabolic process;GO:0010214 seed coat development;GO:0045489 pectin biosynthetic process;GO:0010395 rhamnogalacturonan I metabolic process", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "Q4V398-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000010000.001.11000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q4V3C8-1", "uniprot_id": [ { "id": "PDPK2_ARATH", "url": "https://www.uniprot.org/uniprot/Q4V3C8", "type": "external" } ], "mass": 54441.0, "length": 486, "protein_name": "3-phosphoinositide-dependent protein kinase 2", "gene_name": "PDPK2", "organism": "Arabidopsis", "refseq_name": "3-phosphoinositide-dependent protein kinase", "refseq_ac": [ { "id": "NP_187665", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_187665", "type": "external" } ], "gene_names_uniprotkb": "PDPK2; F13M14.18; F18K10.12; PDK2", "gene_names_refseq": "", "protein_names_uniprotkb": "3-phosphoinositide-dependent protein kinase 2; 2.7.11.1; AtPDK2", "protein_names_refseq": "3-phosphoinositide-dependent protein kinase", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G10540)", "pathway_count": 1, "publication_count": 26, "publication_id_list": "11130713;13678909;14749726;17272265;17317660;18463617;19245862;19376835;20466843;21768351;22440515;22631563;23111157;23328941;23572148;23660473;23776212;24043427;24601666;25561503;26091701;27419465;27862469;28011693;29167316;30833711", "class_list": "", "function": "", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 9, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q0WSV2;Q9SQY4", "ec_number_list": [ { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.3.2.27", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.2.27", "type": "external" }, { "id": "2.7.10.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.-", "type": "external" }, { "id": "3.1.4.46", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.4.46", "type": "external" }, { "id": "2.7.11.25", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.25", "type": "external" }, { "id": "2.7.11.22", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.22", "type": "external" }, { "id": "2.7.10.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.1", "type": "external" }, { "id": "2.7.11.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.-", "type": "external" }, { "id": "2.7.11.24", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.24", "type": "external" }, { "id": "2.7.12.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.1", "type": "external" }, { "id": "2.7.11.23", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.23", "type": "external" }, { "id": "2.7.12.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.2", "type": "external" }, { "id": "2.7.-.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.-.-", "type": "external" }, { "id": "3.1.26.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.26.-", "type": "external" }, { "id": "3.1.3.16", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.16", "type": "external" }, { "id": "2.7.11.34", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.34", "type": "external" }, { "id": "4.6.1.2", "url": "https://www.rhea-db.org/rhea/?query=ec:4.6.1.2", "type": "external" } ], "go_molecular_function": "GO:0004674 protein serine/threonine kinase activity;GO:0005524 ATP binding;GO:0016301 kinase activity;GO:0106310 protein serine kinase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0016020 membrane", "go_biological_process": "GO:0035556 intracellular signal transduction", "synthesized_glycan_count": 0, "hit_score": 2.7, "record_id": "Q4V3C8-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q4V3D2-1", "uniprot_id": [ { "id": "ASP36_ARATH", "url": "https://www.uniprot.org/uniprot/Q4V3D2", "type": "external" } ], "mass": 51981.0, "length": 482, "protein_name": "Aspartic proteinase 36", "gene_name": "A36", "organism": "Arabidopsis", "refseq_name": "Eukaryotic aspartyl protease family protein", "refseq_ac": [ { "id": "NP_198475", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_198475", "type": "external" } ], "gene_names_uniprotkb": "A36; T30G6.12", "gene_names_refseq": "T30G6.12; T30G6_12", "protein_names_uniprotkb": "Aspartic proteinase 36; 3.4.23.-", "protein_names_refseq": "Eukaryotic aspartyl protease family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G36260)", "pathway_count": 1, "publication_count": 3, "publication_id_list": "27862469;27872247;28402691", "class_list": "", "function": "Displays aspartic proteolytic activity (PubMed:27872247). Together with A39, contributes to pollen and ovule development, including the apical cell wall constitution of the growing pollen tubes (PubMed:27872247)., [UniProtKB, PubMed]", "predicted_glycosites": 6, "predicted_n_glycosites": 6, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 2, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 6, "binding_glycan_count": 0, "secondary_ac_list": "Q9FG60", "ec_number_list": [], "go_molecular_function": "GO:0004190 aspartic-type endopeptidase activity", "go_cellular_component": "GO:0005576 extracellular region;GO:0005737 cytoplasm;GO:0005829 cytosol;GO:0005886 plasma membrane;GO:0016020 membrane", "go_biological_process": "GO:0006508 proteolysis;GO:0030163 protein catabolic process;GO:0009555 pollen development;GO:0009846 pollen germination;GO:0009860 pollen tube growth", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "Q4V3D2-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000010000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q4V3E2-1", "uniprot_id": [ { "id": "MRG2_ARATH", "url": "https://www.uniprot.org/uniprot/Q4V3E2", "type": "external" } ], "mass": 37629.0, "length": 327, "protein_name": "Protein MRG2", "gene_name": "MRG2", "organism": "Arabidopsis", "refseq_name": "MRG family protein", "refseq_ac": [ { "id": "NP_171774", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_171774", "type": "external" } ], "gene_names_uniprotkb": "MRG2; F22D16.25", "gene_names_refseq": "MORF related gene 2; MRG2; T14P4.28", "protein_names_uniprotkb": "Protein MRG2; MRG family protein 2; Morf Related Gene 2", "protein_names_refseq": "MRG family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G02740)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "11130712;20466843;23328941;25183522;25211338;27862469", "class_list": "", "function": "Chromatin remodeling factor. Acts as a 'reader' protein by binding to H3K4me3 and H3K36me3 to control histone H4 acetylation. Increases the transcriptional levels of the flowering time genes FLC and FT (PubMed:25183522, PubMed:25211338). Binds the chromatin at the FT promoter upon interaction with CO (PubMed:25211338)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 3, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9SRX0", "ec_number_list": [], "go_molecular_function": "GO:1990841 promoter-specific chromatin binding;GO:0140003 histone H3K36me3 reader activity", "go_cellular_component": "GO:0005634 nucleus;GO:0000123 histone acetyltransferase complex", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006355 regulation of DNA-templated transcription;GO:0040029 epigenetic regulation of gene expression;GO:0048510 regulation of timing of transition from vegetative to reproductive phase;GO:0048586 regulation of long-day photoperiodism, flowering", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q4V3E2-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q4VCM1-1", "uniprot_id": [ { "id": "LCAT2_ARATH", "url": "https://www.uniprot.org/uniprot/Q4VCM1", "type": "external" } ], "mass": 71688.0, "length": 633, "protein_name": "Phospholipid--sterol O-acyltransferase", "gene_name": "PSAT", "organism": "Arabidopsis", "refseq_name": "phospholipid sterol acyl transferase 1", "refseq_ac": [ { "id": "NP_171897", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_171897", "type": "external" } ], "gene_names_uniprotkb": "PSAT; F21M11.5; LCAT2; PSAT1", "gene_names_refseq": "ATPSAT1; ERP1; F21M11.5; F21M11_5; PSAT1; enhanced response to Phytophthora 1; phospholipid sterol acyl transferase 1", "protein_names_uniprotkb": "Phospholipid--sterol O-acyltransferase; 2.3.1.-; Lecithin-cholesterol acyltransferase-like 2", "protein_names_refseq": "phospholipid sterol acyl transferase 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G04010)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "11130712;16020547;19923239;22060019;27862469", "class_list": "", "function": "Involved in lipid catabolism. Essential for sterol esters biosynthesis in leaves and seeds, but not in flowers. Plays a role in controlling the free sterol content of leaves. Catalyzes the transacylation of acyl groups from phospholipids to a variety of different sterols. Prefers phosphatidylethanolamine over phosphatidylcholine as an acyl donor. Not active toward neutral lipids. Highly specific for position sn-2, which in plant lipids is essentially devoid of saturated acyl groups. Broad sterol specificity (cholesterol > campesterol > sitosterol > stigmasterol), but no activity with lupeol or beta-amyrin., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9ZWC1", "ec_number_list": [], "go_molecular_function": "GO:0004607 phosphatidylcholine-sterol O-acyltransferase activity;GO:0008374 O-acyltransferase activity;GO:0080095 phosphatidylethanolamine-sterol O-acyltransferase activity;GO:0080096 phosphatidate-sterol O-acyltransferase activity", "go_cellular_component": "GO:0005737 cytoplasm", "go_biological_process": "GO:0006629 lipid metabolic process;GO:0010150 leaf senescence;GO:0016127 sterol catabolic process", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q4VCM1-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q500V5-1", "uniprot_id": [ { "id": "AGDP1_ARATH", "url": "https://www.uniprot.org/uniprot/Q500V5", "type": "external" } ], "mass": 59713.0, "length": 517, "protein_name": "Protein AGENET DOMAIN (AGD)-CONTAINING P1", "gene_name": "AGDP1", "organism": "Arabidopsis", "refseq_name": "agenet domain-containing protein", "refseq_ac": [ { "id": "NP_172403", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_172403", "type": "external" } ], "gene_names_uniprotkb": "AGDP1; ADCP1; T31J12.4", "gene_names_refseq": "T31J12.4; T31J12_4", "protein_names_uniprotkb": "Protein AGENET DOMAIN (AGD)-CONTAINING P1; Protein ONE AGENET DOMAIN-CONTAINING PROTEIN", "protein_names_refseq": "agenet domain-containing protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G09320)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "11130712;12575993;23111157;23572148;25561503;27862469;30382101;30425322", "class_list": "", "function": "Heterochromatin-binding protein that preferentially occupies long transposons and specifically recognizes the histone H3 'Lys-9' methylation (H3K9me) marks, with a stronger affinity for dimethylated H3K9 (H3K9me2) (PubMed:30382101, PubMed:30425322). Required for transcriptional silencing, non-CG DNA methylation (e.g. CHG and CHH regions), and H3K9 dimethylation (H3K9me2) at some loci (PubMed:30382101, PubMed:30425322). Mediates heterochromatin phase separation and chromocenter formation (PubMed:30425322)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 4, "reported_mutagensis": 6, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q67YH5;Q9ZPZ3", "ec_number_list": [], "go_molecular_function": "GO:0042393 histone binding;GO:0140566 histone reader activity", "go_cellular_component": "GO:0005634 nucleus;GO:0000775 chromosome, centromeric region;GO:0000792 heterochromatin", "go_biological_process": "GO:0006346 DNA methylation-dependent constitutive heterochromatin formation", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "Q500V5-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q501B2-1", "uniprot_id": [ { "id": "BZP16_ARATH", "url": "https://www.uniprot.org/uniprot/Q501B2", "type": "external" } ], "mass": 43109.0, "length": 409, "protein_name": "bZIP transcription factor 16", "gene_name": "BZIP16", "organism": "Arabidopsis", "refseq_name": "basic region/leucine zipper transcription factor 16", "refseq_ac": [ { "id": "NP_850248", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_850248", "type": "external" } ], "gene_names_uniprotkb": "BZIP16", "gene_names_refseq": "AtbZIP16; T32F12.9; T32F12_9; bZIP16; basic region/leucine zipper transcription factor 16", "protein_names_uniprotkb": "bZIP transcription factor 16; AtbZIP16", "protein_names_refseq": "basic region/leucine zipper transcription factor 16", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G35530)", "pathway_count": 1, "publication_count": 18, "publication_id_list": "10617197;11906833;18315949;19376835;22438062;22718771;23111157;23328941;23572148;23660473;23776212;24601666;25387999;25561503;26091701;27862469;28011693;30833711", "class_list": "", "function": "Transcriptional activator that binds to the G-box motif (5'-CACGTG-3') and other cis-acting elements with 5'-ACGT-3' core, such as Hex, C-box and as-1 motifs. Possesses high binding affinity to G-box, much lower affinity to Hex and C-box, and little affinity to as-1 element (PubMed:18315949). G-box and G-box-like motifs are cis-acting elements defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control (Probable). Binds to the G-box motif 5'-CACGTG-3' of LHCB2.4 (At3g27690) promoter. May act as transcriptional repressor in light-regulated expression of LHCB2.4. Binds DNA as monomer. DNA-binding activity is redox-dependent (PubMed:22718771)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 7, "reported_mutagensis": 2, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "O82288", "ec_number_list": [], "go_molecular_function": "GO:0003700 DNA-binding transcription factor activity;GO:0042802 identical protein binding;GO:0000976 transcription cis-regulatory region binding;GO:0043565 sequence-specific DNA binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006355 regulation of DNA-templated transcription;GO:0045893 positive regulation of DNA-templated transcription", "synthesized_glycan_count": 0, "hit_score": 1.9, "record_id": "Q501B2-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000001001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q501F9-1", "uniprot_id": [ { "id": "P2C67_ARATH", "url": "https://www.uniprot.org/uniprot/Q501F9", "type": "external" } ], "mass": 41334.0, "length": 370, "protein_name": "Probable protein phosphatase 2C 67", "gene_name": "PP2C67", "organism": "Arabidopsis", "refseq_name": "Protein phosphatase 2C family protein", "refseq_ac": [ { "id": "NP_195896", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_195896", "type": "external" } ], "gene_names_uniprotkb": "PP2C67; F9G14.70; PP2C-D1", "gene_names_refseq": "APD7; Arabidopsis Pp2c clade D 7; F9G14.70; F9G14_70", "protein_names_uniprotkb": "Probable protein phosphatase 2C 67; 3.1.3.16; AtPP2C67", "protein_names_refseq": "Protein phosphatase 2C family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G02760)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "11130714;19021904;24858935;27862469", "class_list": "", "function": "Dephosphorylates and represses plasma membrane H(+)-ATPases (PM H(+)-ATPases, e.g. AHA1 and AHA2), thus influencing negatively plant growth and fitness (PubMed:24858935). Promotes the apical hook maintenance of etiolated seedlings (PubMed:24858935)., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9LZ09", "ec_number_list": [ { "id": "3.1.3.16", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.16", "type": "external" }, { "id": "3.1.3.27", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.27", "type": "external" }, { "id": "3.1.3.48", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.48", "type": "external" }, { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.7.13.3", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.13.3", "type": "external" } ], "go_molecular_function": "GO:0046872 metal ion binding;GO:0004722 protein serine/threonine phosphatase activity;GO:0016791 phosphatase activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005739 mitochondrion;GO:0005886 plasma membrane", "go_biological_process": "GO:1902531 regulation of intracellular signal transduction;GO:1900056 negative regulation of leaf senescence", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "Q501F9-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q52K88-1", "uniprot_id": [ { "id": "NUD13_ARATH", "url": "https://www.uniprot.org/uniprot/Q52K88", "type": "external" } ], "mass": 23187.0, "length": 202, "protein_name": "Nudix hydrolase 13, mitochondrial", "gene_name": "NUDT13", "organism": "Arabidopsis", "refseq_name": "nudix hydrolase homolog 13", "refseq_ac": [ { "id": "NP_189303", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_189303", "type": "external" } ], "gene_names_uniprotkb": "NUDT13; MLJ15.8; NUDX13", "gene_names_refseq": "ARABIDOPSIS THALIANA NUDIX HYDROLASE HOMOLOG 13; ATNUDT13; ATNUDX13; NUDX13; nudix hydrolase homolog 13", "protein_names_uniprotkb": "Nudix hydrolase 13, mitochondrial; 3.6.1.-; AtNUDT13", "protein_names_refseq": "nudix hydrolase homolog 13", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G26690)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "10819329;15878881;17824959;18815383;27862469", "class_list": "", "function": "Mediates the hydrolysis of some nucleoside diphosphate derivatives. Can use diadenosine 5',5'''-P(1)P(6) hexaphosphate (Ap(6)A), diadenosine 5',5'''-P(1)P(5) pentaphosphate (Ap(5)A) and adenosine tetraphosphate (p(4)A) as substrates, but not diadenosine 5',5'''-P(1)P(4) tetraphosphate (Ap(4)A), diadenosine 5',5'''-P(1)P(3) triphosphate (Ap(3)A), deoxyribonucleoside triphosphates, ribonucleoside triphosphates, diphosphoinositol pentakisphosphate (PP-InsP(5)) and 5-phospho-alpha-D-ribosyl diphosphate (PRPP)., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q29PY9", "ec_number_list": [], "go_molecular_function": "GO:0034432 bis(5'-adenosyl)-pentaphosphatase activity;GO:0016787 hydrolase activity;GO:0046872 metal ion binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005739 mitochondrion", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q52K88-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q52T38-1", "uniprot_id": [ { "id": "ZDH22_ARATH", "url": "https://www.uniprot.org/uniprot/Q52T38", "type": "external" } ], "mass": 68234.0, "length": 620, "protein_name": "Protein S-acyltransferase 24", "gene_name": "PAT24", "organism": "Arabidopsis", "refseq_name": "Ankyrin repeat family protein with DHHC zinc finger domain-containing protein", "refseq_ac": [ { "id": "NP_197535", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_197535", "type": "external" } ], "gene_names_uniprotkb": "PAT24; F5O24.240; TIP1", "gene_names_refseq": "F5O24.240; F5O24_240; TIP GROWTH DEFECTIVE 1; TIP1", "protein_names_uniprotkb": "Protein S-acyltransferase 24; 2.3.1.225; Ankyrin repeat-containing S-palmitoyltransferase; AtTIP1; Palmitoyltransferase TIP1; Protein TIP GROWTH DEFECTIVE 1; Zinc finger DHHC domain-containing protein TIP1", "protein_names_refseq": "Ankyrin repeat family protein with DHHC zinc finger domain-containing protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G20350)", "pathway_count": 1, "publication_count": 11, "publication_id_list": "11130714;16100337;18463617;20466843;22430844;22968831;23111157;25561503;27862469;35644016;8022944", "class_list": "", "function": "Palmitoyltransferase involved in cell growth regulation (Ref.8). Contributes to the palmitoylation of CESA3, thus regulating cellulose biosynthesis (PubMed:35644016)., [UniProtKB, UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 3, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "I1VCB2;Q0WQT8", "ec_number_list": [ { "id": "2.3.1.225", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.1.225", "type": "external" } ], "go_molecular_function": "GO:0000035 acyl binding;GO:0019706 protein-cysteine S-palmitoyltransferase activity;GO:0016417 S-acyltransferase activity", "go_cellular_component": "GO:0000139 Golgi membrane;GO:0005768 endosome;GO:0005794 Golgi apparatus;GO:0030659 cytoplasmic vesicle membrane;GO:0005802 trans-Golgi network", "go_biological_process": "GO:0009932 cell tip growth;GO:2001006 regulation of cellulose biosynthetic process;GO:2000652 regulation of secondary cell wall biogenesis", "synthesized_glycan_count": 0, "hit_score": 1.2, "record_id": "Q52T38-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q564K3-1", "uniprot_id": [ { "id": "CND2_ARATH", "url": "https://www.uniprot.org/uniprot/Q564K3", "type": "external" } ], "mass": 75365.0, "length": 671, "protein_name": "Condensin complex subunit 2", "gene_name": "CAPH", "organism": "Arabidopsis", "refseq_name": "condensin complex subunit", "refseq_ac": [ { "id": "NP_180818", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_180818", "type": "external" } ], "gene_names_uniprotkb": "CAPH; EMB2795; T26B15", "gene_names_refseq": "EMB2795; EMBRYO DEFECTIVE 2795; T26B15.15; T26B15_15", "protein_names_uniprotkb": "Condensin complex subunit 2; AtCAP-H; Chromosome-associated protein H; Non-SMC condensin I complex subunit H; Protein EMBRYO DEFECTIVE 2795", "protein_names_refseq": "condensin complex subunit", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G32590)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "10617197;15883832;18926486;27862469", "class_list": "", "function": "Regulatory subunit of the condensin complex, a complex required for conversion of interphase chromatin into mitotic-like condense chromosomes. The condensin complex probably introduces positive supercoils into relaxed DNA in the presence of type I topoisomerases and converts nicked DNA into positive knotted forms in the presence of type II topoisomerases (By similarity). Essential protein., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O80896", "ec_number_list": [], "go_molecular_function": "GO:0003682 chromatin binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0000793 condensed chromosome;GO:0000796 condensin complex", "go_biological_process": "GO:0051301 cell division;GO:0007076 mitotic chromosome condensation", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "Q564K3-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q56WD9-1", "uniprot_id": [ { "id": "THIK2_ARATH", "url": "https://www.uniprot.org/uniprot/Q56WD9", "type": "external" } ], "mass": 48579.0, "length": 462, "protein_name": "3-ketoacyl-CoA thiolase 2, peroxisomal", "gene_name": "PED1", "organism": "Arabidopsis", "refseq_name": "peroxisomal 3-ketoacyl-CoA thiolase 3", "refseq_ac": [ { "id": "NP_180873", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_180873", "type": "external" } ], "gene_names_uniprotkb": "PED1; F25I18.11; KAT2", "gene_names_refseq": "3-KETOACYL-COA THIOLASE 2; KAT2; PED1; PEROXISOME DEFECTIVE 1; PKT3; peroxisomal 3-ketoacyl-CoA thiolase 3; potassium channel in Arabidopsis thaliana 2", "protein_names_uniprotkb": "3-ketoacyl-CoA thiolase 2, peroxisomal; 2.3.1.16; Acetyl-CoA acyltransferase 2; Beta-ketothiolase 2; Peroxisomal 3-oxoacyl-CoA thiolase 2; Peroxisome defective protein 1", "protein_names_refseq": "peroxisomal 3-ketoacyl-CoA thiolase 3", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G33150)", "pathway_count": 1, "publication_count": 18, "publication_id_list": "10212254;10617197;11356168;11696182;11891244;14593172;14630959;15141068;15979881;16630629;17120136;17728299;17951448;18441338;20463027;21257607;27862469;9490742", "class_list": "", "function": "Involved in long chain fatty-acid beta-oxidation prior to gluconeogenesis during germination and subsequent seedling growth. Confers sensitivity to 2,4-dichlorophenoxybutiric acid (2,4-DB). Required for local and systemic induction of jasmonic acid (JA) biosynthesis after wounding. Seems to be involved in JA biosynthesis during senescence (PubMed:11696182, PubMed:11891244, PubMed:15141068, PubMed:15979881, PubMed:9490742). May be involved in the positive regulation of abscisic acid-activated signaling pathway (PubMed:21257607)., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q93Z35;Q9S7M3", "ec_number_list": [ { "id": "2.3.1.16", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.1.16", "type": "external" } ], "go_molecular_function": "GO:0003988 acetyl-CoA C-acyltransferase activity", "go_cellular_component": "GO:0005730 nucleolus;GO:0005739 mitochondrion;GO:0005777 peroxisome;GO:0005783 endoplasmic reticulum;GO:0000325 plant-type vacuole", "go_biological_process": "GO:0010124 phenylacetate catabolic process;GO:0006635 fatty acid beta-oxidation;GO:0009611 response to wounding;GO:0009789 positive regulation of abscisic acid-activated signaling pathway;GO:0031408 oxylipin biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 1.9, "record_id": "Q56WD9-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q56WH4-1", "uniprot_id": [ { "id": "HDT2_ARATH", "url": "https://www.uniprot.org/uniprot/Q56WH4", "type": "external" } ], "mass": 32348.0, "length": 306, "protein_name": "Histone deacetylase HDT2", "gene_name": "HDT2", "organism": "Arabidopsis", "refseq_name": "histone deacetylase 2B", "refseq_ac": [ { "id": "NP_197657", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_197657", "type": "external" } ], "gene_names_uniprotkb": "HDT2; HD2B; HD2; HDA4; MDJ22.7", "gene_names_refseq": "ARABIDOPSIS HISTONE DEACETYLASE 2; ATHD2B; ATHD2; HD2B; HD2; HDA4; HDT02; HDT2; HISTONE DEACETYLASE 2; HISTONE DEACETYLASE; MDJ22.7; MDJ22_7; histone deacetylase 2B", "protein_names_uniprotkb": "Histone deacetylase HDT2; HD-tuins protein 2; Histone deacetylase 2b", "protein_names_refseq": "histone deacetylase 2B", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G22650)", "pathway_count": 1, "publication_count": 29, "publication_id_list": "10792817;11469594;12466527;12694598;14593172;15144374;17272265;18433157;19376835;20331964;20466843;21768351;22223895;22631563;23111157;23328941;23572148;23660473;23776212;24601666;25561503;26091701;26187819;27862469;28011693;28683804;29167316;30833711;9405937", "class_list": "", "function": "Probably mediates the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events., [UniProtKB, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 18, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "O49209;Q9FNJ6", "ec_number_list": [], "go_molecular_function": "GO:0016787 hydrolase activity;GO:0004407 histone deacetylase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005730 nucleolus;GO:0005739 mitochondrion;GO:0000325 plant-type vacuole;GO:0009505 plant-type cell wall", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0045892 negative regulation of DNA-templated transcription;GO:0009294 DNA-mediated transformation;GO:0009944 polarity specification of adaxial/abaxial axis;GO:0010162 seed dormancy process", "synthesized_glycan_count": 0, "hit_score": 3.0, "record_id": "Q56WH4-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000001001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q56WK6-1", "uniprot_id": [ { "id": "PATL1_ARATH", "url": "https://www.uniprot.org/uniprot/Q56WK6", "type": "external" } ], "mass": 64046.0, "length": 573, "protein_name": "Patellin-1", "gene_name": "PATL1", "organism": "Arabidopsis", "refseq_name": "PATELLIN 1", "refseq_ac": [ { "id": "NP_177360", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_177360", "type": "external" } ], "gene_names_uniprotkb": "PATL1; T9N14.1", "gene_names_refseq": "PATELLIN 1; PATL1; T9N14.1; T9N14_1", "protein_names_uniprotkb": "Patellin-1", "protein_names_refseq": "PATELLIN 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G72150)", "pathway_count": 1, "publication_count": 22, "publication_id_list": "11130712;14593172;15466235;17317660;19292762;19376835;20543027;21768351;22092075;22223895;23111157;23572148;23660473;23776212;24043427;24601666;25561503;26091701;27862469;28011693;29167316;30833711", "class_list": "", "function": "Carrier protein that may be involved in membrane-trafficking events associated with cell plate formation during cytokinesis. Binds to some hydrophobic molecules and promotes their transfer between the different cellular sites. Binds to phosphoinositides with a preference for PtdIns(5)P, PtdIns(4,5)P2 and PtdIns(3)P., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 21, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9C7U0", "ec_number_list": [], "go_molecular_function": "GO:0002020 protease binding;GO:0008289 lipid binding;GO:1901149 salicylic acid binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005739 mitochondrion;GO:0005794 Golgi apparatus;GO:0005886 plasma membrane;GO:0005773 vacuole", "go_biological_process": "GO:0051301 cell division;GO:0009860 pollen tube growth", "synthesized_glycan_count": 0, "hit_score": 2.3, "record_id": "Q56WK6-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q56WN1-1", "uniprot_id": [ { "id": "GLN11_ARATH", "url": "https://www.uniprot.org/uniprot/Q56WN1", "type": "external" } ], "mass": 39115.0, "length": 356, "protein_name": "Glutamine synthetase cytosolic isozyme 1-1", "gene_name": "GLN1-1", "organism": "Arabidopsis", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "GLN1-1; K12B20.50", "gene_names_refseq": "", "protein_names_uniprotkb": "Glutamine synthetase cytosolic isozyme 1-1; 1; 6.3.1.2; GLN1; Glutamate--ammonia ligase GLN1", "protein_names_refseq": "", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G37600)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "10470850;10482686;14593172;14757761;16472779;21094157;22060019;22223895;23820729;27862469", "class_list": "", "function": "High-affinity glutamine synthetase which catalyzes the synthesis of glutamine from ammonium and glutamate (PubMed:14757761). May contribute to the homeostatic control of glutamine synthesis in roots., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 3, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9FHR0", "ec_number_list": [ { "id": "6.3.1.2", "url": "https://www.rhea-db.org/rhea/?query=ec:6.3.1.2", "type": "external" } ], "go_molecular_function": "GO:0005524 ATP binding;GO:0005507 copper ion binding;GO:0004356 glutamine synthetase activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005829 cytosol;GO:0005886 plasma membrane;GO:0022626 cytosolic ribosome;GO:0009506 plasmodesma", "go_biological_process": "GO:0006542 glutamine biosynthetic process;GO:0042128 nitrate assimilation;GO:0010150 leaf senescence", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "Q56WN1-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q56X46-1", "uniprot_id": [ { "id": "MSL2_ARATH", "url": "https://www.uniprot.org/uniprot/Q56X46", "type": "external" } ], "mass": 74429.0, "length": 673, "protein_name": "Mechanosensitive ion channel protein 2, chloroplastic", "gene_name": "MSL2", "organism": "Arabidopsis", "refseq_name": "MSCS-like 2", "refseq_ac": [ { "id": "NP_001078567", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001078567", "type": "external" } ], "gene_names_uniprotkb": "MSL2; F12B17.160", "gene_names_refseq": "F12B17.160; F12B17_160; MSCS-like 2; MSL2", "protein_names_uniprotkb": "Mechanosensitive ion channel protein 2, chloroplastic; Mechanosensitive channel of small conductance-like 2; MscS-Like protein 2", "protein_names_refseq": "MSCS-like 2", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G10490)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "11130714;12626684;16401419;19423640;21810996;27862469", "class_list": "", "function": "Mechanosensitive channel that opens in response to stretch forces in the membrane lipid bilayer (By similarity). Controls plastid size, shape, and perhaps division during normal plant development by altering ion flux in response to changes in membrane tension. Acts as a component of the chloroplast division machinery., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "B9DHF7;F4KGW2;Q9LXA1", "ec_number_list": [], "go_molecular_function": "GO:0005216 monoatomic ion channel activity", "go_cellular_component": "GO:0005886 plasma membrane;GO:0009507 chloroplast;GO:0009526 plastid envelope;GO:0031969 chloroplast membrane", "go_biological_process": "GO:0071470 cellular response to osmotic stress;GO:0010020 chloroplast fission", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q56X46-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q56X52-1", "uniprot_id": [ { "id": "AOX4_ARATH", "url": "https://www.uniprot.org/uniprot/Q56X52", "type": "external" } ], "mass": 40574.0, "length": 351, "protein_name": "Ubiquinol oxidase 4, chloroplastic/chromoplastic", "gene_name": "AOX4", "organism": "Arabidopsis", "refseq_name": "Alternative oxidase family protein", "refseq_ac": [ { "id": "NP_567658", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_567658", "type": "external" } ], "gene_names_uniprotkb": "AOX4; IM; PTOX; T10I14_90", "gene_names_refseq": "IM1; IMMUTANS; IM; PLASTID TERMINAL OXIDASE; PTOX; T10I14.90; T10I14_90; plastid terminal oxidase", "protein_names_uniprotkb": "Ubiquinol oxidase 4, chloroplastic/chromoplastic; 1.10.3.11; Alternative oxidase 4; Plastid terminal oxidase; Protein IMMUTANS", "protein_names_refseq": "Alternative oxidase family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G22260)", "pathway_count": 1, "publication_count": 13, "publication_id_list": "10617198;10938359;11553735;14504923;14593172;15032871;16249174;16449381;19386811;27862469;7920709;9878631;9878632", "class_list": "", "function": "Acts early in chloroplast biogenesis as a component of a redox chain responsible for phytoene desaturation. Prevents the generation of toxic oxygen radicals and photooxidation of the nascent photosynthetic apparatus. Involved in the differentiation of multiple plastid types, including chloroplasts, amyloplasts, and etioplasts. Might participate in the chloroplast respiratory chain., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 21, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O49631;Q9SBA4;Q9ZSQ3", "ec_number_list": [ { "id": "1.10.3.11", "url": "https://www.rhea-db.org/rhea/?query=ec:1.10.3.11", "type": "external" } ], "go_molecular_function": "GO:0046872 metal ion binding;GO:0106292 superoxide-generating NADPH oxidase activity;GO:0009916 alternative oxidase activity;GO:0102721 ubiquinol:oxygen oxidoreductase activity", "go_cellular_component": "GO:0005739 mitochondrion;GO:0009535 chloroplast thylakoid membrane;GO:0009579 thylakoid;GO:0046862 chromoplast membrane", "go_biological_process": "GO:0009266 response to temperature stimulus;GO:0022904 respiratory electron transport chain;GO:0009644 response to high light intensity;GO:0010230 alternative respiration;GO:0009657 plastid organization", "synthesized_glycan_count": 0, "hit_score": 1.4, "record_id": "Q56X52-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q56XM9-1", "uniprot_id": [ { "id": "PAPS3_ARATH", "url": "https://www.uniprot.org/uniprot/Q56XM9", "type": "external" } ], "mass": 57704.0, "length": 507, "protein_name": "Nuclear poly(A) polymerase 3", "gene_name": "PAPS3", "organism": "Arabidopsis", "refseq_name": "poly(A) polymerase 3", "refseq_ac": [ { "id": "NP_187308", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_187308", "type": "external" } ], "gene_names_uniprotkb": "PAPS3; F5E6.11", "gene_names_refseq": "F5E6.11; F5E6_11; PAPS3; poly(A) polymerase 3", "protein_names_uniprotkb": "Nuclear poly(A) polymerase 3; 2.7.7.19; PAP(III); Poly(A) polymerase III; Polynucleotide adenylyltransferase 3", "protein_names_refseq": "poly(A) polymerase 3", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G06560)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "11130713;15297145;18479511;19956626;23111157;27862469", "class_list": "", "function": "Essential protein (PubMed:19956626). Polymerase that creates the 3'-poly(A) tail of mRNA's (PubMed:15297145). Also required for the endoribonucleolytic cleavage reaction at some polyadenylation sites. May acquire specificity through interaction with a cleavage and polyadenylation specificity factor (CPSF) at its C-terminus (By similarity)., [UniProtKB, PubMed, PubMed, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 3, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q7XJ92;Q9C8Z7", "ec_number_list": [ { "id": "2.7.7.19", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.7.19", "type": "external" } ], "go_molecular_function": "GO:0003723 RNA binding;GO:0005524 ATP binding;GO:0046872 metal ion binding;GO:1990817 poly(A) RNA polymerase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm", "go_biological_process": "GO:0006397 mRNA processing;GO:0031123 RNA 3'-end processing", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q56XM9-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q56XY2-1", "uniprot_id": [ { "id": "QQT1_ARATH", "url": "https://www.uniprot.org/uniprot/Q56XY2", "type": "external" } ], "mass": 33565.0, "length": 298, "protein_name": "GPN-loop GTPase QQT1", "gene_name": "QQT1", "organism": "Arabidopsis", "refseq_name": "P-loop containing nucleoside triphosphate hydrolases superfamily protein", "refseq_ac": [ { "id": "NP_001119261", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001119261", "type": "external" } ], "gene_names_uniprotkb": "QQT1; EMB1705; MWD9.17", "gene_names_refseq": "EMB1705; EMBRYO DEFECTIVE 1705; MWD9.17; MWD9_17; QQT1; QUATRE-QUART 1", "protein_names_uniprotkb": "GPN-loop GTPase QQT1; 3.6.5.-; Protein EMBRYO DEFECTIVE 1705; Protein QUATRE QUART 1", "protein_names_refseq": "P-loop containing nucleoside triphosphate hydrolases superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G22370)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "17419841;20466843;27862469;28475733;9501997", "class_list": "", "function": "Small GTPase that is essential for the correct formation of the tangential divisions in early embryos. Associates with microtubule during mitosis and may function in the positioning of the division plane. May participate in the patterning of the early embryo at the octant-dermatogen transition (PubMed:17419841). Is crucial for normal development of the plant (PubMed:28475733)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9FMR4", "ec_number_list": [], "go_molecular_function": "GO:0003924 GTPase activity;GO:0005525 GTP binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005819 spindle;GO:0005874 microtubule;GO:0009524 phragmoplast", "go_biological_process": "GO:0051301 cell division;GO:0032502 developmental process;GO:0009658 chloroplast organization;GO:0009793 embryo development ending in seed dormancy;GO:1902182 shoot apical meristem development", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q56XY2-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q56Y52-1", "uniprot_id": [ { "id": "POT1A_ARATH", "url": "https://www.uniprot.org/uniprot/Q56Y52", "type": "external" } ], "mass": 53923.0, "length": 467, "protein_name": "Protection of telomeres protein 1a", "gene_name": "POT1A", "organism": "Arabidopsis", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "POT1A; F5G3; POT1", "gene_names_refseq": "", "protein_names_uniprotkb": "Protection of telomeres protein 1a; AtPOT1a; AtPot1; Protection of telomeres protein 1", "protein_names_refseq": "", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G05210)", "pathway_count": 1, "publication_count": 16, "publication_id_list": "10617197;15589838;15824455;16107718;17627276;17911168;18212040;19228335;21164032;25329641;25697340;27651456;27862469;30834599;31392988;31754031", "class_list": "", "function": "Component of the telomerase ribonucleoprotein (RNP) complex that is essential for the positive regulation of telomere length (PubMed:16107718, PubMed:17627276, PubMed:25697340). Binds RNA non-specifically (PubMed:27651456). Binds specifically single-stranded telomeric DNA (PubMed:16107718, PubMed:27651456). Not required to recruit telomerase to telomeres, but stimulates TER1 RNP repeat addition processivity (PubMed:25329641)., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 6, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q4W6W9;Q4W6X0;Q52VR7;Q6Q835;Q9SJ37", "ec_number_list": [], "go_molecular_function": "GO:0098505 G-rich strand telomeric DNA binding;GO:0003723 RNA binding;GO:0042162 telomeric DNA binding;GO:0043047 single-stranded telomeric DNA binding;GO:0010521 telomerase inhibitor activity", "go_cellular_component": "GO:0005730 nucleolus;GO:0005737 cytoplasm;GO:0000783 nuclear telomere cap complex", "go_biological_process": "GO:0000723 telomere maintenance;GO:0016233 telomere capping;GO:0032212 positive regulation of telomere maintenance via telomerase;GO:0032210 regulation of telomere maintenance via telomerase;GO:0032206 positive regulation of telomere maintenance", "synthesized_glycan_count": 0, "hit_score": 1.7, "record_id": "Q56Y52-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q56Y74-1", "uniprot_id": [ { "id": "MORC6_ARATH", "url": "https://www.uniprot.org/uniprot/Q56Y74", "type": "external" } ], "mass": 74175.0, "length": 663, "protein_name": "Protein MICRORCHIDIA 6", "gene_name": "MORC6", "organism": "Arabidopsis", "refseq_name": "Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein", "refseq_ac": [ { "id": "NP_173344", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_173344", "type": "external" } ], "gene_names_uniprotkb": "MORC6; CRH6; DMS11; F14D16.25", "gene_names_refseq": "AtMORC6; DEFECTIVE IN MERISTEM SILENCING 11; DMS11; F14D16.25; F14D16_25; MORC6; Microrchidia 6", "protein_names_uniprotkb": "Protein MICRORCHIDIA 6; 3.6.-.-; AtMORC6; CRT1-h6; Protein CRT1-homolog 6; Protein DEFECTIVE IN MERISTEM SILENCING 11", "protein_names_refseq": "Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G19100)", "pathway_count": 1, "publication_count": 11, "publication_id_list": "11130712;19704828;22555433;22560611;23675613;24465213;24799676;25561503;27171361;27171427;27862469", "class_list": "", "function": "Involved in RNA-directed DNA methylation (RdDM) as a component of the RdDM machinery and required for gene silencing (PubMed:22560611, PubMed:23675613, PubMed:27171427). Together with SUVH2 and SUVH9, regulates the silencing of some transposable elements (TEs) (PubMed:27171427). Exhibits ATPase activity (PubMed:22560611). May also be involved in the regulation of chromatin architecture/condensation to maintain gene silencing (PubMed:22555433, PubMed:27171427). Binds DNA/RNA in a non-specific manner and exhibits endonuclease activity. Probably involved in DNA repair (By similarity). Positive regulator of defense against the oomycete Hyaloperonospora arabidopsidis (Hpa) (PubMed:27171361)., [UniProtKB, PubMed, PubMed, PubMed, UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9LMB8", "ec_number_list": [], "go_molecular_function": "GO:0003677 DNA binding;GO:0003723 RNA binding;GO:0005524 ATP binding;GO:0042803 protein homodimerization activity;GO:0016887 ATP hydrolysis activity", "go_cellular_component": "GO:0005634 nucleus;GO:0009506 plasmodesma;GO:0009941 chloroplast envelope", "go_biological_process": "GO:0098542 defense response to other organism;GO:0006281 DNA repair;GO:0006282 regulation of DNA repair;GO:0060966 regulation of gene silencing by regulatory ncRNA;GO:0080188 gene silencing by siRNA-directed DNA methylation", "synthesized_glycan_count": 0, "hit_score": 1.2, "record_id": "Q56Y74-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q56YA5-1", "uniprot_id": [ { "id": "SGAT_ARATH", "url": "https://www.uniprot.org/uniprot/Q56YA5", "type": "external" } ], "mass": 44208.0, "length": 401, "protein_name": "Serine--glyoxylate aminotransferase", "gene_name": "AGT1", "organism": "Arabidopsis", "refseq_name": "alanine:glyoxylate aminotransferase", "refseq_ac": [ { "id": "NP_001318216", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001318216", "type": "external" } ], "gene_names_uniprotkb": "AGT1; F14O4.7", "gene_names_refseq": "AGT1; AGT; ALANINE:GLYOXYLATE AMINOTRANSFERASE 1; ALANINE:GLYOXYLATE AMINOTRANSFERASE; F14O4.7; F14O4_7; L-serine:glyoxylate aminotransferase; SGAT; alanine:glyoxylate aminotransferase", "protein_names_uniprotkb": "Serine--glyoxylate aminotransferase; 2.6.1.-; 2.6.1.44; 2.6.1.45; 2.6.1.51; AGT; Alanine--glyoxylate aminotransferase; Asparagine aminotransferase; Serine--pyruvate aminotransferase", "protein_names_refseq": "alanine:glyoxylate aminotransferase", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G13360)", "pathway_count": 1, "publication_count": 16, "publication_id_list": "10617197;11309139;14593172;17951448;18235971;21768351;22092075;22223895;23098902;24043427;24505423;25561503;27862469;29654922;31161264;31681359", "class_list": "", "function": "Photorespiratory enzyme that catalyzes transamination reactions with multiple substrates, including asparagine. Functions exclusively as a catabolic enzyme in Asn metabolism (PubMed:18235971, PubMed:23098902). Involved in root development during seedling establishment after seed germination by regulating serine homeostasis and acetate conversion (PubMed:31161264)., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 5, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O81248", "ec_number_list": [ { "id": "2.6.1.51", "url": "https://www.rhea-db.org/rhea/?query=ec:2.6.1.51", "type": "external" }, { "id": "2.6.1.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.6.1.-", "type": "external" }, { "id": "2.6.1.44", "url": "https://www.rhea-db.org/rhea/?query=ec:2.6.1.44", "type": "external" }, { "id": "2.6.1.45", "url": "https://www.rhea-db.org/rhea/?query=ec:2.6.1.45", "type": "external" }, { "id": "2.6.1.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.6.1.2", "type": "external" }, { "id": "2.6.1.4", "url": "https://www.rhea-db.org/rhea/?query=ec:2.6.1.4", "type": "external" } ], "go_molecular_function": "GO:0004760 L-serine-pyruvate transaminase activity;GO:0003729 mRNA binding;GO:0008453 alanine-glyoxylate transaminase activity;GO:0050281 L-serine-glyoxylate transaminase activity", "go_cellular_component": "GO:0005739 mitochondrion;GO:0005777 peroxisome;GO:0005829 cytosol;GO:0005886 plasma membrane;GO:0009507 chloroplast", "go_biological_process": "GO:0019265 glycine biosynthetic process, by transamination of glyoxylate;GO:0009853 photorespiration", "synthesized_glycan_count": 0, "hit_score": 1.7, "record_id": "Q56YA5-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q56YP2-1", "uniprot_id": [ { "id": "PI5K1_ARATH", "url": "https://www.uniprot.org/uniprot/Q56YP2", "type": "external" } ], "mass": 85945.0, "length": 752, "protein_name": "Phosphatidylinositol 4-phosphate 5-kinase 1", "gene_name": "PIP5K1", "organism": "Arabidopsis", "refseq_name": "phosphatidylinositol-4-phosphate 5-kinase 1", "refseq_ac": [ { "id": "NP_173617", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_173617", "type": "external" } ], "gene_names_uniprotkb": "PIP5K1; F2E2.1; P5K1", "gene_names_refseq": "ATPIP5K1; ATPIPK1; PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE; PIP5K1; phosphatidylinositol-4-phosphate 5-kinase 1", "protein_names_uniprotkb": "Phosphatidylinositol 4-phosphate 5-kinase 1; 1-phosphatidylinositol 4-phosphate kinase 1; 2.7.1.68; AtPIP5K1; Diphosphoinositide kinase 1; PtdIns(4)P-5-kinase 1", "protein_names_refseq": "phosphatidylinositol-4-phosphate 5-kinase 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G21980)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "11130712;11489170;11672432;12226484;27862469;30833711;9753781", "class_list": "", "function": "Catalyzes the synthesis of phosphatidylinositol 4,5-bisphosphate and phosphatidylinositol 3,4-bisphosphate., [UniProtKB, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "O22503;O82120;Q9LM65", "ec_number_list": [ { "id": "2.7.1.68", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.68", "type": "external" } ], "go_molecular_function": "GO:0003785 actin monomer binding;GO:0005524 ATP binding;GO:0051015 actin filament binding;GO:0016308 1-phosphatidylinositol-4-phosphate 5-kinase activity;GO:0052742 phosphatidylinositol kinase activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005886 plasma membrane", "go_biological_process": "GO:0046854 phosphatidylinositol phosphate biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q56YP2-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000001001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q56Z59-1", "uniprot_id": [ { "id": "PATL3_ARATH", "url": "https://www.uniprot.org/uniprot/Q56Z59", "type": "external" } ], "mass": 56105.0, "length": 490, "protein_name": "Patellin-3", "gene_name": "PATL3", "organism": "Arabidopsis", "refseq_name": "Sec14p-like phosphatidylinositol transfer family protein", "refseq_ac": [ { "id": "NP_177361", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_177361", "type": "external" } ], "gene_names_uniprotkb": "PATL3; T9N14.8", "gene_names_refseq": "T9N14.8; T9N14_8", "protein_names_uniprotkb": "Patellin-3", "protein_names_refseq": "Sec14p-like phosphatidylinositol transfer family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G72160)", "pathway_count": 1, "publication_count": 29, "publication_id_list": "11130712;14593172;15466235;17317660;18463617;18686298;19245862;19376835;20374526;20466843;21768351;22223895;22438062;23111157;23172892;23328941;23572148;23660473;23776212;24043427;24601666;24924143;25561503;26091701;27862469;28011693;29167316;29654922;30833711", "class_list": "", "function": "Carrier protein that may be involved in membrane-trafficking events associated with cell plate formation during cytokinesis. Binds to some hydrophobic molecules such as phosphoinositides and promotes their transfer between the different cellular sites (By similarity)., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 7, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q94AG3;Q9C7T9", "ec_number_list": [], "go_molecular_function": "GO:0002020 protease binding;GO:0008289 lipid binding", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005886 plasma membrane", "go_biological_process": "GO:0051301 cell division", "synthesized_glycan_count": 0, "hit_score": 3.0, "record_id": "Q56Z59-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q56ZN6-1", "uniprot_id": [ { "id": "AVP2_ARATH", "url": "https://www.uniprot.org/uniprot/Q56ZN6", "type": "external" } ], "mass": 85133.0, "length": 802, "protein_name": "Pyrophosphate-energized membrane proton pump 2", "gene_name": "AVPL1", "organism": "Arabidopsis", "refseq_name": "vacuolar H+-pyrophosphatase 2", "refseq_ac": [ { "id": "NP_001117619", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001117619", "type": "external" } ], "gene_names_uniprotkb": "AVPL1; AVP2; F9K20.2", "gene_names_refseq": "1; AVP2; AVPL1; AtVHP2; F9K20.2; F9K20_2; VACUOLAR-PYROPHOSPHATASE LIKE PROTEIN 1; VACUOLAR-TYPE H+-TRANSLOCATING INORGANIC PYROPHOSPHATASE; VHP2; VP2; vacuolar H+-pyrophosphatase 2", "protein_names_uniprotkb": "Pyrophosphate-energized membrane proton pump 2; 7.1.3.1; AVP1-like protein 1; H(+)-PPase 2; Pyrophosphate-energized inorganic pyrophosphatase 2; Vacuolar proton pyrophosphatase 2", "protein_names_refseq": "vacuolar H+-pyrophosphatase 2", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G78920)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "10806252;11130712;11163790;14593172;27862469", "class_list": "", "function": "Pyrophosphatase active in both inorganic pyrophosphate hydrolysis and H(+) translocation., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9LDJ4;Q9MB70;Q9ZVB1", "ec_number_list": [ { "id": "7.1.3.1", "url": "https://www.rhea-db.org/rhea/?query=ec:7.1.3.1", "type": "external" } ], "go_molecular_function": "GO:0046872 metal ion binding;GO:0004427 inorganic diphosphate phosphatase activity;GO:0009678 diphosphate hydrolysis-driven proton transmembrane transporter activity", "go_cellular_component": "GO:0000139 Golgi membrane;GO:0005768 endosome;GO:0005794 Golgi apparatus;GO:0005886 plasma membrane;GO:0005802 trans-Golgi network", "go_biological_process": "GO:0055085 transmembrane transport", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q56ZN6-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q570B4-1", "uniprot_id": [ { "id": "KCS10_ARATH", "url": "https://www.uniprot.org/uniprot/Q570B4", "type": "external" } ], "mass": 61961.0, "length": 550, "protein_name": "3-ketoacyl-CoA synthase 10", "gene_name": "FDH", "organism": "Arabidopsis", "refseq_name": "3-ketoacyl-CoA synthase 10", "refseq_ac": [ { "id": "NP_180193", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_180193", "type": "external" } ], "gene_names_uniprotkb": "FDH; EL4; KCS10; T1D16.11", "gene_names_refseq": "3-ketoacyl-CoA synthase 10; FDH; FIDDLEHEAD; KCS10; T1D16.11; T1D16_11", "protein_names_uniprotkb": "3-ketoacyl-CoA synthase 10; 2.3.1.199; KCS-10; Protein FIDDLEHEAD; VLCFA condensing enzyme 10; Very long-chain fatty acid condensing enzyme 10", "protein_names_refseq": "3-ketoacyl-CoA synthase 10", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G26250)", "pathway_count": 1, "publication_count": 16, "publication_id_list": "10559443;10617197;10655527;12916765;14593172;1644226;18465198;22074104;23111157;23660473;25561503;27862469;29654922;8416837;9299123;9611177", "class_list": "", "function": "Contributes to cuticular wax and suberin biosynthesis. Prevents the postgenital fusion of epiderm cells in organs in contact, as well as ectopic pollen hydration and germination. Required during ovules formation. May regulate an epidermis-specific developmental program during gynoecial ontogeny., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 10, "reported_mutagensis": 8, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O64846;Q9LDX6;Q9LLE3;Q9LLE4;Q9LLE5;Q9LLE6;Q9LLE7;Q9LLE8", "ec_number_list": [ { "id": "2.3.1.199", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.1.199", "type": "external" }, { "id": "2.3.1.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.1.-", "type": "external" } ], "go_molecular_function": "GO:0009922 fatty acid elongase activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005777 peroxisome;GO:0005783 endoplasmic reticulum;GO:0005789 endoplasmic reticulum membrane", "go_biological_process": "GO:0000038 very long-chain fatty acid metabolic process;GO:0008610 lipid biosynthetic process;GO:0009409 response to cold;GO:0006633 fatty acid biosynthetic process;GO:0009416 response to light stimulus", "synthesized_glycan_count": 0, "hit_score": 1.7, "record_id": "Q570B4-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q570C0-1", "uniprot_id": [ { "id": "TIR1_ARATH", "url": "https://www.uniprot.org/uniprot/Q570C0", "type": "external" } ], "mass": 66799.0, "length": 594, "protein_name": "Protein TRANSPORT INHIBITOR RESPONSE 1", "gene_name": "TIR1", "organism": "Arabidopsis", "refseq_name": "F-box/RNI-like superfamily protein", "refseq_ac": [ { "id": "NP_567135", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_567135", "type": "external" } ], "gene_names_uniprotkb": "TIR1; FBL1; T20O10.80; WEI1", "gene_names_refseq": "AtTIR1; TIR1; TRANSPORT INHIBITOR RESPONSE 1", "protein_names_uniprotkb": "Protein TRANSPORT INHIBITOR RESPONSE 1; Weak ethylene-insensitive protein 1", "protein_names_refseq": "F-box/RNI-like superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G62980)", "pathway_count": 1, "publication_count": 20, "publication_id_list": "10398681;11077244;11130713;11337587;11713520;12215511;12606727;14593172;14617065;15917797;15917798;15992545;16627744;17410169;17435248;18305205;18391211;23660473;27862469;9436980", "class_list": "", "function": "Auxin receptor that mediates Aux/IAA proteins proteasomal degradation and auxin-regulated transcription. The SCF(TIR1) E3 ubiquitin ligase complex is involved in auxin-mediated signaling pathway that regulate root and hypocotyl growth, lateral root formation, cell elongation, and gravitropism. Appears to allow pericycle cells to overcome G2 arrest prior to lateral root development. Plays a role in ethylene signaling in roots. Confers sensitivity to the virulent bacterial pathogen P.syringae., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 3, "reported_mutagensis": 6, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A5YZP2;B2CVU0;O24660", "ec_number_list": [], "go_molecular_function": "GO:0004842 ubiquitin-protein transferase activity;GO:0000822 inositol hexakisphosphate binding;GO:0010011 auxin binding;GO:0038198 auxin receptor activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0019005 SCF ubiquitin ligase complex;GO:0000151 ubiquitin ligase complex", "go_biological_process": "GO:0006952 defense response;GO:0016567 protein ubiquitination;GO:0006511 ubiquitin-dependent protein catabolic process;GO:0031146 SCF-dependent proteasomal ubiquitin-dependent protein catabolic process;GO:0016036 cellular response to phosphate starvation", "synthesized_glycan_count": 0, "hit_score": 2.1, "record_id": "Q570C0-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q570K8-1", "uniprot_id": [ { "id": "SCOP4_ARATH", "url": "https://www.uniprot.org/uniprot/Q570K8", "type": "external" } ], "mass": 8143.0, "length": 75, "protein_name": "Serine rich endogenous peptide 4", "gene_name": "PROSCOOP4", "organism": "Arabidopsis", "refseq_name": "uncharacterized protein", "refseq_ac": [ { "id": "NP_001078710", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001078710", "type": "external" } ], "gene_names_uniprotkb": "PROSCOOP4; K15C23; SCOOP4; STMP10", "gene_names_refseq": "", "protein_names_uniprotkb": "Serine rich endogenous peptide 4; AtSCOOP4; Phytocytokine SCOOP4; Precursor of serine rich endogenous peptide phytocytokine 4; Secreted transmembrane peptide 10", "protein_names_refseq": "uncharacterized protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G44568)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "27862469;30715439;31001913;33514716;34535661;35401621", "class_list": "", "function": "Brassicaceae-specific phytocytokine (plant endogenous peptide released into the apoplast) perceived by MIK2 in a BAK1/SERK3 and SERK4 coreceptors-dependent manner, that modulates various physiological and antimicrobial processes including growth prevention and reactive oxygen species (ROS) response regulation (PubMed:31001913, PubMed:33514716, PubMed:34535661). Inhibits root growth (PubMed:34535661). Prevents general growth and development (PubMed:31001913). Exhibits antibacterial effects against Pseudomonas syringae pv. tomato DC3000, Ralstonia solanacearum, Bacillus subtilis and Agrobacterium tumefaciens, thus being an antimicrobial peptide (AMP) (PubMed:31001913)., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0033612 receptor serine/threonine kinase binding;GO:0030275 LRR domain binding", "go_cellular_component": "GO:0005886 plasma membrane;GO:0048046 apoplast", "go_biological_process": "GO:0006952 defense response;GO:0009611 response to wounding;GO:0042742 defense response to bacterium;GO:0009751 response to salicylic acid;GO:0009625 response to insect", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q570K8-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q570R7-1", "uniprot_id": [ { "id": "PIF7_ARATH", "url": "https://www.uniprot.org/uniprot/Q570R7", "type": "external" } ], "mass": 40826.0, "length": 366, "protein_name": "Transcription factor PIF7", "gene_name": "BHLH72", "organism": "Arabidopsis", "refseq_name": "phytochrome-interacting factor7", "refseq_ac": [ { "id": "NP_001032117", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001032117", "type": "external" } ], "gene_names_uniprotkb": "BHLH72; EN109; MFB13.4; PIF7", "gene_names_refseq": "MFB13.4; MFB13_4; PIF7; phytochrome-interacting factor7", "protein_names_uniprotkb": "Transcription factor PIF7; AtbHLH72; Basic helix-loop-helix protein 72; Phytochrome-interacting factor 7; Transcription factor EN 109; bHLH 72; bHLH transcription factor bHLH072", "protein_names_refseq": "phytochrome-interacting factor7", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G61270)", "pathway_count": 1, "publication_count": 12, "publication_id_list": "12679534;12897250;14600211;14993207;15208423;15486100;18252845;23708772;25944101;27862469;29926790;9628582", "class_list": "", "function": "Transcription factor acting negatively in the phytochrome B signaling pathway under prolonged red light. Regulates PHYB abundance at the post-transcriptional level, possibly via the ubiquitin-proteasome pathway. May regulate the expression of a subset of genes by binding to the G-box motif., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 5, "reported_mutagensis": 2, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q7XJ93;Q9FLK6", "ec_number_list": [], "go_molecular_function": "GO:0003700 DNA-binding transcription factor activity;GO:0046983 protein dimerization activity;GO:0003690 double-stranded DNA binding", "go_cellular_component": "GO:0005634 nucleus;GO:0016607 nuclear speck", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006355 regulation of DNA-templated transcription;GO:0009416 response to light stimulus;GO:0009585 red, far-red light phototransduction;GO:0009704 de-etiolation", "synthesized_glycan_count": 0, "hit_score": 1.3, "record_id": "Q570R7-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q588V7-1", "uniprot_id": [ { "id": "TEB_ARATH", "url": "https://www.uniprot.org/uniprot/Q588V7", "type": "external" } ], "mass": 238523.0, "length": 2154, "protein_name": "Helicase and polymerase-containing protein TEBICHI", "gene_name": "TEB", "organism": "Arabidopsis", "refseq_name": "MUS308 and mammalian DNA polymerase-like protein", "refseq_ac": [ { "id": "NP_001078482", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001078482", "type": "external" } ], "gene_names_uniprotkb": "TEB; F4D11.100", "gene_names_refseq": "", "protein_names_uniprotkb": "Helicase and polymerase-containing protein TEBICHI; 3.6.4.-", "protein_names_refseq": "MUS308 and mammalian DNA polymerase-like protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G32700)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "10617198;16517762;19696887;23111157;24265739;27862469", "class_list": "", "function": "Required for regulated cell division and differentiation in meristems and embryos, thus modulating adaxial-abaxial polarity. Regulates the progression of cell cycle and DNA replication (e.g. G2/M progression and intrachromosomal recombination) and the expression of genes during development, especially genes nearby the Helitron transposons., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O65531", "ec_number_list": [], "go_molecular_function": "GO:0003887 DNA-directed DNA polymerase activity;GO:0003677 DNA binding;GO:0005524 ATP binding;GO:0016787 hydrolase activity;GO:0004386 helicase activity", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0051301 cell division;GO:0006302 double-strand break repair;GO:0010468 regulation of gene expression;GO:1902749 regulation of cell cycle G2/M phase transition;GO:0006261 DNA-templated DNA replication", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q588V7-1", "record_type": "protein", "filter_code": "0000000.0000101.010000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q5BPF3-1", "uniprot_id": [ { "id": "BASL_ARATH", "url": "https://www.uniprot.org/uniprot/Q5BPF3", "type": "external" } ], "mass": 29123.0, "length": 262, "protein_name": "Protein BREAKING OF ASYMMETRY IN THE STOMATAL LINEAGE", "gene_name": "BASL", "organism": "Arabidopsis", "refseq_name": "breaking of asymmetry in the stomatal lineage", "refseq_ac": [ { "id": "NP_001032115", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001032115", "type": "external" } ], "gene_names_uniprotkb": "BASL; MAE1.13", "gene_names_refseq": "BASL; BREAKING OF ASYMMETRY IN THE STOMATAL LINEAGE; MAE1.13; MAE1_13", "protein_names_uniprotkb": "Protein BREAKING OF ASYMMETRY IN THE STOMATAL LINEAGE", "protein_names_refseq": "breaking of asymmetry in the stomatal lineage", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G60880)", "pathway_count": 1, "publication_count": 16, "publication_id_list": "16244158;19523675;20220310;20705185;21903812;21963668;23044038;23662679;23776212;25843888;27422992;27746029;27862469;30429609;9501997;9872454", "class_list": "", "function": "Regulates asymmetric cell division (ACD), especially in stomatal-lineage cells, probably by modulating accumulation and subcellular polarization of POLAR and SPCH (PubMed:25843888, PubMed:30429609). Mediates an attenuation of MAPK signaling upon polarization of POLAR and ASK7/BIN2 in stomatal lineage ground cells (SLGCs) undergoing ACD, and relieves BIN2 inhibition of SPCH in the nucleus (PubMed:25843888, PubMed:30429609). When phosphorylated, functions as a scaffold and recruits the MAPKKK YODA, MPK3 and MPK6 to spatially reorganize the MAPK signaling pathway at the cortex of cells undergoing ACD (PubMed:25843888). Cortical polarization leads to elevated nuclear MPK6 signaling and lowered SPCH abundance in one of the two daughter cells, thus differentiating the two daughter cells after ACD (PubMed:27746029)., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 10, "reported_mutagensis": 21, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "F4K0I7;Q5Q097;Q5Q098;Q9FJG8", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005634 nucleus;GO:0005886 plasma membrane;GO:0005938 cell cortex;GO:0071944 cell periphery", "go_biological_process": "GO:0009786 regulation of asymmetric cell division;GO:0008356 asymmetric cell division;GO:0009826 unidimensional cell growth;GO:0010374 stomatal complex development", "synthesized_glycan_count": 0, "hit_score": 1.7, "record_id": "Q5BPF3-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000001001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q5E924-1", "uniprot_id": [ { "id": "G3PP2_ARATH", "url": "https://www.uniprot.org/uniprot/Q5E924", "type": "external" } ], "mass": 44846.0, "length": 420, "protein_name": "Glyceraldehyde-3-phosphate dehydrogenase GAPCP2, chloroplastic", "gene_name": "GAPCP2", "organism": "Arabidopsis", "refseq_name": "glyceraldehyde-3-phosphate dehydrogenase of plastid 2", "refseq_ac": [ { "id": "NP_173080", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_173080", "type": "external" } ], "gene_names_uniprotkb": "GAPCP2; F3O9.10", "gene_names_refseq": "F3O9.10; F3O9_10; GAPCP-2; glyceraldehyde-3-phosphate dehydrogenase of plastid 2", "protein_names_uniprotkb": "Glyceraldehyde-3-phosphate dehydrogenase GAPCP2, chloroplastic; 1.2.1.12; Glyceraldehyde-3-phosphate dehydrogenase of plastid 2; NAD-dependent glyceraldehydephosphate dehydrogenase chloroplastic 2", "protein_names_refseq": "glyceraldehyde-3-phosphate dehydrogenase of plastid 2", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G16300)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "11130712;14593172;19675149;20107025;25561503;27862469", "class_list": "", "function": "Involved in plastidial glycolytic pathway and plays a specific role in glycolytic energy production in non-green plastids and chloroplasts. Essential for breakdown of starch to form sucrose for export to non-photosynthetic tissues, and to generate primary metabolites for anabolic pathways such as fatty acid and amino acid synthesis. Plays an important role in plant development by providing substrates for the phosphorylated pathway of serine biosynthesis in roots. Plays a crucial role in pollen development. Functionally redundant with GAPCP1., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 3, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q84WR0;Q8L8W7;Q9SA29", "ec_number_list": [ { "id": "1.2.1.12", "url": "https://www.rhea-db.org/rhea/?query=ec:1.2.1.12", "type": "external" } ], "go_molecular_function": "GO:0051287 NAD binding;GO:0004365 glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity;GO:0050661 NADP binding", "go_cellular_component": "GO:0005829 cytosol;GO:0009507 chloroplast;GO:0009536 plastid;GO:0009570 chloroplast stroma", "go_biological_process": "GO:0005975 carbohydrate metabolic process;GO:0006006 glucose metabolic process;GO:0006096 glycolytic process;GO:0080144 intracellular amino acid homeostasis;GO:0080022 primary root development", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q5E924-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q5EAH9-1", "uniprot_id": [ { "id": "LESV_ARATH", "url": "https://www.uniprot.org/uniprot/Q5EAH9", "type": "external" } ], "mass": 65573.0, "length": 578, "protein_name": "Protein LIKE EARLY STARVATION, chloroplastic", "gene_name": "LESV", "organism": "Arabidopsis", "refseq_name": "uncharacterized protein", "refseq_ac": [ { "id": "NP_001190098", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001190098", "type": "external" } ], "gene_names_uniprotkb": "LESV; F1I16.170", "gene_names_refseq": "", "protein_names_uniprotkb": "Protein LIKE EARLY STARVATION, chloroplastic", "protein_names_refseq": "uncharacterized protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G55760)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "11130713;14593172;17631522;27207856;27862469;34367195;35665549", "class_list": "", "function": "Binds preferentially to highly ordered alpha-glucans, such as starch and crystalline maltodextrins (PubMed:35665549). Involved in the organization of the starch granule matrix, thus influencing starch turnover by modulating the accessibility of starch polymers to modifying and degrading enzymes involved in phosphorylation, hydrolyzes and synthesis, including starch synthases (SSI and SSIII), starch phosphorylases (PHS1), isoamylase, beta-amylase, glucan water dikinase (GWD) and phosphoglucan water dikinase (PWD) (PubMed:27207856, PubMed:35665549)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A178VES7;Q8L722;Q9M048", "ec_number_list": [], "go_molecular_function": "GO:2001070 starch binding", "go_cellular_component": "GO:0005829 cytosol;GO:0009507 chloroplast;GO:0009570 chloroplast stroma;GO:0043036 starch grain", "go_biological_process": "GO:0005982 starch metabolic process;GO:2000904 regulation of starch metabolic process", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q5EAH9-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q5FV35-1", "uniprot_id": [ { "id": "MORC2_ARATH", "url": "https://www.uniprot.org/uniprot/Q5FV35", "type": "external" } ], "mass": 69977.0, "length": 626, "protein_name": "Protein MICRORCHIDIA 2", "gene_name": "MORC2", "organism": "Arabidopsis", "refseq_name": "Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein", "refseq_ac": [ { "id": "NP_195351", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_195351", "type": "external" } ], "gene_names_uniprotkb": "MORC2; CRH1; F23E13.170", "gene_names_refseq": "AtMORC2; CRH1; CRT1 Homologue 1; F23E13.170; F23E13_170; MORC2; microrchidia 2", "protein_names_uniprotkb": "Protein MICRORCHIDIA 2; 3.6.-.-; AtMORC2; CRT1-h1; Protein CRT1-homolog 1", "protein_names_refseq": "Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G36280)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "10617198;14593172;19704828;20332379;23250427;24465213;24799676;27862469", "class_list": "", "function": "Mediator of defense signaling triggered by distinct classes of R proteins. Required during hypersensitive response (HR) that confers disease resistance to turnip crinkle virus (TCV) (PubMed:19704828). Contributes to resistance against Pseudomonas syringae and Hyaloperonospora arabidopsidis, at early stages prior to cytosolic calcium ions Ca(2+) accumulation (PubMed:20332379). Required for pathogen-associated molecular pattern (PAMP)-triggered immunity, basal resistance, non-host resistance and systemic acquired resistance (SAR) (PubMed:23250427). Involved in RNA-directed DNA methylation (RdDM) as a component of the RdDM machinery and required for gene silencing. May also be involved in the regulation of chromatin architecture to maintain gene silencing (PubMed:24799676). Exhibits ATPase activity (By similarity)., [UniProtKB, PubMed, PubMed, PubMed, UniProtKB, PubMed]", "predicted_glycosites": 2, "predicted_n_glycosites": 0, "predicted_o_glycosites": 2, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 2, "binding_glycan_count": 0, "secondary_ac_list": "O65519;Q84WN9", "ec_number_list": [], "go_molecular_function": "GO:0003677 DNA binding;GO:0003723 RNA binding;GO:0005524 ATP binding;GO:0016887 ATP hydrolysis activity;GO:0004519 endonuclease activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005768 endosome", "go_biological_process": "GO:0098542 defense response to other organism;GO:0006281 DNA repair;GO:0051607 defense response to virus;GO:0006325 chromatin organization;GO:0031047 regulatory ncRNA-mediated gene silencing", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "Q5FV35-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q5HZ00-1", "uniprot_id": [ { "id": "SPS3_ARATH", "url": "https://www.uniprot.org/uniprot/Q5HZ00", "type": "external" } ], "mass": 46401.0, "length": 422, "protein_name": "Solanesyl diphosphate synthase 3, chloroplastic/mitochondrial", "gene_name": "SPS3", "organism": "Arabidopsis", "refseq_name": "geranyl diphosphate synthase 1", "refseq_ac": [ { "id": "NP_001031483", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001031483", "type": "external" } ], "gene_names_uniprotkb": "SPS3; GPS1; T31E10.3", "gene_names_refseq": "GERANYLPYROPHOSPHATE SYNTHASE; GPPS; GPS1; T31E10.3; T31E10_3; geranyl diphosphate synthase 1", "protein_names_uniprotkb": "Solanesyl diphosphate synthase 3, chloroplastic/mitochondrial; 2.5.1.85; All-trans-nonaprenyl-diphosphate synthase 3 (geranylgeranyl-diphosphate specific); AtPPPS; Geranyl diphosphate synthase 1; Trans-type polyprenyl pyrophosphate synthase", "protein_names_refseq": "geranyl diphosphate synthase 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G34630)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "10617197;11069698;14593172;15653808;17877699;21220764;21950843;27862469", "class_list": "", "function": "May be involved in the supply of solanesyl diphosphate for ubiquinone-9 (UQ-9) biosynthesis in mitochondria (PubMed:21950843). Synthesizes C25 to C45 medium / long-chain products depending on the type of substrate available (PubMed:21220764). Can use geranyl diphosphate, farnesyl diphosphate or geranylgeranyl diphosphate as substrates, but not dimethylallyl diphosphate (PubMed:11069698, PubMed:17877699, PubMed:21220764)., [UniProtKB, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 6, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "F4IHY6;O64684;Q8RWM1;Q9FT89", "ec_number_list": [ { "id": "2.5.1.85", "url": "https://www.rhea-db.org/rhea/?query=ec:2.5.1.85", "type": "external" }, { "id": "2.5.1.29", "url": "https://www.rhea-db.org/rhea/?query=ec:2.5.1.29", "type": "external" } ], "go_molecular_function": "GO:0004161 dimethylallyltranstransferase activity;GO:0046872 metal ion binding;GO:0004659 prenyltransferase activity;GO:0052924 all-trans-nonaprenyl-diphosphate synthase (geranylgeranyl-diphosphate specific) activity", "go_cellular_component": "GO:0005739 mitochondrion;GO:0009507 chloroplast;GO:0009536 plastid;GO:0032476 polyprenyl diphosphate synthase complex", "go_biological_process": "GO:0006744 ubiquinone biosynthetic process;GO:0008299 isoprenoid biosynthetic process;GO:0009793 embryo development ending in seed dormancy", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "Q5HZ00-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q5HZ36-1", "uniprot_id": [ { "id": "GAT21_ARATH", "url": "https://www.uniprot.org/uniprot/Q5HZ36", "type": "external" } ], "mass": 44840.0, "length": 398, "protein_name": "GATA transcription factor 21", "gene_name": "GATA21", "organism": "Arabidopsis", "refseq_name": "GATA type zinc finger transcription factor family protein", "refseq_ac": [ { "id": "NP_200497", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_200497", "type": "external" } ], "gene_names_uniprotkb": "GATA21; GNC; MPI10.2", "gene_names_refseq": "GATA TRANSCRIPTION FACTOR 21; GATA21; GATA; GNC; MPI10.2; MPI10_2; carbon metabolism-involved; nitrate-inducible", "protein_names_uniprotkb": "GATA transcription factor 21; AtGNC; Protein GATA, NITRATE-INDUCIBLE, CARBON-METABOLISM INVOLVED", "protein_names_refseq": "GATA type zinc finger transcription factor family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G56860)", "pathway_count": 1, "publication_count": 14, "publication_id_list": "10718197;14593172;15084732;18417639;19962994;20844019;22102866;22811435;23335616;23739688;23878229;25077795;25755661;27862469", "class_list": "", "function": "Transcriptional regulator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters (PubMed:22102866, PubMed:25077795). Involved in the modulation of chloroplast development, growth and division in a cytokinin-dependent manner (PubMed:22102866, PubMed:22811435). Repressor of the gibberellic acid (GA) signaling pathway that represses flowering and modulates greening, in a SOC1-dependent manner (PubMed:20844019, PubMed:23739688, PubMed:25077795). Prevents the accumulation of SOC1 during flowering (PubMed:23739688). Promotes chlorophyll biosynthesis throughout the plant, by regulating chlorophyll biosynthetic genes (e.g. HEMA1 and GUN4) and chloroplast localized glutamate synthase (e.g. GLU1) (PubMed:18417639, PubMed:20844019, PubMed:22102866, PubMed:23878229, PubMed:25077795). Involved in the regulation of sugar-sensing genes (e.g. HXK1, HXK2, STP13 and PLT6) (PubMed:18417639). Regulator of germination, senescence, elongation growth and flowering time (PubMed:20844019, PubMed:22102866, PubMed:23878229). Also influences leaf starch content (PubMed:22102866)., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q8VZC1;Q9LV39", "ec_number_list": [], "go_molecular_function": "GO:0003700 DNA-binding transcription factor activity;GO:0008270 zinc ion binding;GO:0000976 transcription cis-regulatory region binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006355 regulation of DNA-templated transcription;GO:0007623 circadian rhythm;GO:0010468 regulation of gene expression;GO:0009416 response to light stimulus", "synthesized_glycan_count": 0, "hit_score": 1.5, "record_id": "Q5HZ36-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q5HZ38-1", "uniprot_id": [ { "id": "GRIK2_ARATH", "url": "https://www.uniprot.org/uniprot/Q5HZ38", "type": "external" } ], "mass": 45652.0, "length": 407, "protein_name": "Serine/threonine-protein kinase GRIK2", "gene_name": "GRIK2", "organism": "Arabidopsis", "refseq_name": "geminivirus rep interacting kinase 2", "refseq_ac": [ { "id": "NP_200863", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_200863", "type": "external" } ], "gene_names_uniprotkb": "GRIK2; MUF9.18; SNAK1", "gene_names_refseq": "ATSNAK1; GRIK2; MUF9.13; MUF9_13; geminivirus rep interacting kinase 2", "protein_names_uniprotkb": "Serine/threonine-protein kinase GRIK2; 2.7.11.1; AtSnAK1; Protein GEMINIVIRUS REP INTERACTING KINASE 2; Protein GRIK2; SnRK1-activating protein kinase 1", "protein_names_refseq": "geminivirus rep interacting kinase 2", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G60550)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "14593172;17041027;17237223;19339507;20164192;27862469;9679202", "class_list": "", "function": "Activates SnRK1.1/KIN10 and SnRK1.2/KIN11 by phosphorylation of their activation-loop 'Thr-198' and 'Thr-176', respectively. Required for the regulation by SnRK1 kinases of the transcription of a large set of genes, the modification the activity of metabolic enzymes, and the control of various nutrient-responsive cellular developmental processes., [UniProtKB, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 3, "reported_mutagensis": 3, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q8LPG6;Q9FKJ2", "ec_number_list": [ { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.3.2.27", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.2.27", "type": "external" }, { "id": "2.7.10.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.-", "type": "external" }, { "id": "3.1.4.46", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.4.46", "type": "external" }, { "id": "2.7.11.25", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.25", "type": "external" }, { "id": "2.7.11.22", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.22", "type": "external" }, { "id": "2.7.10.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.1", "type": "external" }, { "id": "2.7.11.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.-", "type": "external" }, { "id": "2.7.11.24", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.24", "type": "external" }, { "id": "2.7.12.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.1", "type": "external" }, { "id": "2.7.11.23", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.23", "type": "external" }, { "id": "2.7.12.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.2", "type": "external" }, { "id": "2.7.-.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.-.-", "type": "external" }, { "id": "3.1.26.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.26.-", "type": "external" }, { "id": "3.1.3.16", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.16", "type": "external" }, { "id": "2.7.11.34", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.34", "type": "external" }, { "id": "4.6.1.2", "url": "https://www.rhea-db.org/rhea/?query=ec:4.6.1.2", "type": "external" } ], "go_molecular_function": "GO:0004672 protein kinase activity;GO:0004674 protein serine/threonine kinase activity;GO:0005524 ATP binding;GO:0016301 kinase activity;GO:0106310 protein serine kinase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm", "go_biological_process": "GO:0006468 protein phosphorylation;GO:0035556 intracellular signal transduction;GO:0009615 response to virus", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q5HZ38-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q5KS41-1", "uniprot_id": [ { "id": "WSD11_ARATH", "url": "https://www.uniprot.org/uniprot/Q5KS41", "type": "external" } ], "mass": 54849.0, "length": 486, "protein_name": "Wax ester synthase/diacylglycerol acyltransferase 11", "gene_name": "WSD11", "organism": "Arabidopsis", "refseq_name": "O-acyltransferase (WSD1-like) family protein", "refseq_ac": [ { "id": "NP_200151", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_200151", "type": "external" } ], "gene_names_uniprotkb": "WSD11; FOP1; K19E1.19", "gene_names_refseq": "FOLDED PETAL 1; FOP1; K19E1.19; K19E1_19; NTHASE/DIACYLGLYCEROL ACYLTRANSFERASE 11; WSD11", "protein_names_uniprotkb": "Wax ester synthase/diacylglycerol acyltransferase 11; 2.3.1.20; 2.3.1.75; Diacylglycerol O-acyltransferase WSD11; Long-chain-alcohol O-fatty-acyltransferase WSD11; Protein FOLDED PETALS 1; WS/DGAT 11", "protein_names_refseq": "O-acyltransferase (WSD1-like) family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G53390)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "11910074;12502715;18621978;22440515;23314942;23505340;27135508;27862469;30729606;9734815", "class_list": "", "function": "Bifunctional wax ester synthase/diacylglycerol acyltransferase (By similarity). Involved in cuticular wax biosynthesis (By similarity). Required for petals development, probably by mediating the production of fatty acids at the plasma membrane in the petal epidermis acting as lubricants that makes petal elongation smooth in narrow space between the sepals and the anthers inside floral buds (PubMed:23314942, PubMed:27135508)., [UniProtKB, PubMed, PubMed, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 3, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q8GXG7;Q9FK03", "ec_number_list": [ { "id": "2.3.1.75", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.1.75", "type": "external" }, { "id": "2.3.1.20", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.1.20", "type": "external" } ], "go_molecular_function": "GO:0004144 diacylglycerol O-acyltransferase activity;GO:0047196 long-chain-alcohol O-fatty-acyltransferase activity;GO:0008374 O-acyltransferase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005886 plasma membrane;GO:0005789 endoplasmic reticulum membrane", "go_biological_process": "GO:0019432 triglyceride biosynthetic process;GO:0048441 petal development;GO:0048446 petal morphogenesis", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "Q5KS41-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q5M731-1", "uniprot_id": [ { "id": "TPS1L_ARATH", "url": "https://www.uniprot.org/uniprot/Q5M731", "type": "external" } ], "mass": 55813.0, "length": 522, "protein_name": "Thiamine biosynthetic bifunctional enzyme TH1, chloroplastic", "gene_name": "TH1", "organism": "Arabidopsis", "refseq_name": "thiamine biosynthesis protein", "refseq_ac": [ { "id": "NP_173707", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_173707", "type": "external" } ], "gene_names_uniprotkb": "TH1; F19G10.10", "gene_names_refseq": "F19G10.10; F19G10_10; TH-1; TH1; THIAMINE REQUIRING 1; THIAMINEE; THIE", "protein_names_uniprotkb": "Thiamine biosynthetic bifunctional enzyme TH1, chloroplastic; TMP pyrophosphorylase; TMP-PPase; Thiamine-phosphate pyrophosphorylase", "protein_names_refseq": "thiamine biosynthesis protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G22940)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "11130712;14593172;16666289;17174261;27862469", "class_list": "", "function": "Essential for thiamine biosynthesis. Bifunctional enzyme that catalyzes the phosphorylation of hydroxymethylpyrimidine phosphate (HMP-P) to HMP-PP and condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O23128;Q8L7M9", "ec_number_list": [ { "id": "2.7.1.49", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.49", "type": "external" }, { "id": "2.5.1.3", "url": "https://www.rhea-db.org/rhea/?query=ec:2.5.1.3", "type": "external" } ], "go_molecular_function": "GO:0005524 ATP binding;GO:0046872 metal ion binding;GO:0004789 thiamine-phosphate diphosphorylase activity;GO:0008902 hydroxymethylpyrimidine kinase activity;GO:0008972 phosphomethylpyrimidine kinase activity", "go_cellular_component": "GO:0009507 chloroplast;GO:0009570 chloroplast stroma", "go_biological_process": "GO:0009229 thiamine diphosphate biosynthetic process;GO:0009228 thiamine biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q5M731-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q5MFV8-1", "uniprot_id": [ { "id": "PME5_ARATH", "url": "https://www.uniprot.org/uniprot/Q5MFV8", "type": "external" } ], "mass": 64728.0, "length": 595, "protein_name": "Pectinesterase 5", "gene_name": "PME5", "organism": "Arabidopsis", "refseq_name": "Plant invertase/pectin methylesterase inhibitor superfamily", "refseq_ac": [ { "id": "NP_182227", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_182227", "type": "external" } ], "gene_names_uniprotkb": "PME5; ARATH67; F14M4.13; VGD1", "gene_names_refseq": "F14M4.13; VANGUARD1; VGD1", "protein_names_uniprotkb": "Pectinesterase 5; 3.1.1.11; AtPME5; AtPME67; PE 5; Pectin methylesterase 5; Pectin methylesterase 67; Protein VANGUARD 1", "protein_names_refseq": "Plant invertase/pectin methylesterase inhibitor superfamily", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G47040)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "10617197;14593172;15337457;15659637;16622707;19144003;21673079;27862469", "class_list": "", "function": "Acts in the modification of cell walls via demethylesterification of cell wall pectin. Plays an important role in growth of pollen tubes in female floral tissues, possibly via enhancing the interaction between the pollen tube and female floral tissues by modification of the cell walls (PubMed:15659637). May be regulated by MYB80 during anther development and play a role in tapetum and pollen development (PubMed:21673079)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 3, "predicted_n_glycosites": 3, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 3, "binding_glycan_count": 0, "secondary_ac_list": "O80721;Q9SMV9", "ec_number_list": [ { "id": "3.1.1.11", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.1.11", "type": "external" }, { "id": "3.2.2.22", "url": "https://www.rhea-db.org/rhea/?query=ec:3.2.2.22", "type": "external" } ], "go_molecular_function": "GO:0030599 pectinesterase activity;GO:0046910 pectinesterase inhibitor activity", "go_cellular_component": "GO:0000139 Golgi membrane;GO:0005576 extracellular region;GO:0005886 plasma membrane;GO:0090406 pollen tube", "go_biological_process": "GO:0045490 pectin catabolic process;GO:0009860 pollen tube growth;GO:0042545 cell wall modification", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "Q5MFV8-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000010000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q5PP23-1", "uniprot_id": [ { "id": "FLY1_ARATH", "url": "https://www.uniprot.org/uniprot/Q5PP23", "type": "external" } ], "mass": 64604.0, "length": 562, "protein_name": "Transmembrane E3 ubiquitin-protein ligase FLY1", "gene_name": "FLY1", "organism": "Arabidopsis", "refseq_name": "RING/U-box superfamily protein", "refseq_ac": [ { "id": "NP_001328219", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001328219", "type": "external" } ], "gene_names_uniprotkb": "FLY1; F20O9.50", "gene_names_refseq": "F20O9.50; F20O9_50; FLY1; FLYING SAUCER 1", "protein_names_uniprotkb": "Transmembrane E3 ubiquitin-protein ligase FLY1; 2.3.2.27; Protein FLYING SAUCER 1; RING-type E3 ubiquitin transferase FLY1", "protein_names_refseq": "RING/U-box superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G28370)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "10617198;19245862;23482858;27862469", "class_list": "", "function": "E3 ubiquitin-protein ligase that regulates the degree of methylesterification of pectin in seed mucilage. May be involved in the recycling of pectin methylesterase enzymes in the endomembrane system of seed coat epidermal cells. Possesses E3 ubiquitin-protein ligase activity in vitro when associated with the E1 enzyme UBA1 and the E2 enzyme UBC8. May be involved in xylem development., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O49446;Q0WN63", "ec_number_list": [], "go_molecular_function": "GO:0008270 zinc ion binding;GO:0061630 ubiquitin protein ligase activity;GO:0004842 ubiquitin-protein transferase activity", "go_cellular_component": "GO:0012505 endomembrane system", "go_biological_process": "GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process;GO:0016567 protein ubiquitination;GO:0009827 plant-type cell wall modification;GO:0048363 mucilage pectin metabolic process;GO:0080001 mucilage extrusion from seed coat", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "Q5PP23-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q5PP37-1", "uniprot_id": [ { "id": "ATXR2_ARATH", "url": "https://www.uniprot.org/uniprot/Q5PP37", "type": "external" } ], "mass": 52803.0, "length": 473, "protein_name": "Histone-lysine N-methyltransferase ATXR2", "gene_name": "ATXR2", "organism": "Arabidopsis", "refseq_name": "histone-lysine N-methyltransferase ATXR2", "refseq_ac": [ { "id": "NP_188819", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_188819", "type": "external" } ], "gene_names_uniprotkb": "ATXR2; MSD21.13; SDG36; SET36", "gene_names_refseq": "ATXR2; SDG36; SET DOMAIN PROTEIN 36; histone-lysine N-methyltransferase ATXR2", "protein_names_uniprotkb": "Histone-lysine N-methyltransferase ATXR2; 2.1.1.-; Protein SET DOMAIN GROUP 36; TRX-related protein 2; Trithorax-related protein 2", "protein_names_refseq": "histone-lysine N-methyltransferase ATXR2", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G21820)", "pathway_count": 1, "publication_count": 15, "publication_id_list": "10819329;11691919;18463617;20466843;23111157;23572148;23660473;23776212;26091701;27862469;29167316;29184030;29517958;29923261;30833711", "class_list": "", "function": "Histone methyltransferase that methylates 'Lys-36' (H3K36me) of histone H3 to produce H3K36me3 (PubMed:29184030). Promotes early stages of cellular dedifferentiation through H3K36me3-dependent, and to a lesser degree H3K4me3-dependent, activation of Lateral organ Boundaries-Domain (LBD) (e.g. LBD16 and LBD29) genes (PubMed:29184030). Positive regulator of root organogenesis including lateral root formation as well as adventitious root formation from wounded leaf tissues (PubMed:29517958). Recruited by JMJ30/ARF (e.g. ARF7 and ARF19) complexes to promote the deposition of H3K36me3 and, to a lower extent, H3K4me3 at LBD genes promoters, thus ensuring their stable activation during callus formation on callus-inducing medium (CIM) (PubMed:29184030, PubMed:29923261)., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 2, "predicted_n_glycosites": 0, "predicted_o_glycosites": 2, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 12, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 2, "binding_glycan_count": 0, "secondary_ac_list": "Q9LSY2", "ec_number_list": [ { "id": "2.1.1.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.1.1.-", "type": "external" } ], "go_molecular_function": "GO:0008270 zinc ion binding;GO:0046975 histone H3K36 methyltransferase activity", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0032259 methylation;GO:0040029 epigenetic regulation of gene expression;GO:0010311 lateral root formation;GO:1990110 callus formation;GO:0062211 root regeneration", "synthesized_glycan_count": 0, "hit_score": 1.6, "record_id": "Q5PP37-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000001001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q5S2C4-1", "uniprot_id": [ { "id": "NCKP1_ARATH", "url": "https://www.uniprot.org/uniprot/Q5S2C4", "type": "external" } ], "mass": 158915.0, "length": 1425, "protein_name": "Protein NAP1", "gene_name": "NAP1", "organism": "Arabidopsis", "refseq_name": "transcription activator", "refseq_ac": [ { "id": "NP_001031485", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001031485", "type": "external" } ], "gene_names_uniprotkb": "NAP1; GRL; NAPP; NAP; T4C15.22", "gene_names_refseq": "GNARLED; GRL; NAP1; NAPP; NCK-ASSOCIATED PROTEIN 1; T4C15.22; T4C15_22", "protein_names_uniprotkb": "Protein NAP1; ARP2/3 regulatory protein subunit NAPP; AtNAP125; AtNAP1; NAP of plants; Nck-associated protein 1; Protein GNARLED; p125Nap1", "protein_names_refseq": "transcription activator", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G35110)", "pathway_count": 1, "publication_count": 17, "publication_id_list": "10617197;15294869;15296760;15316111;15516496;19245862;20466843;23111157;23328941;23572148;23660473;23776212;25561503;26091701;27862469;29654922;30833711", "class_list": "", "function": "Involved in regulation of actin and microtubule organization. Part of a WAVE complex that activates the Arp2/3 complex., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 15, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O82180;Q66GU3;Q6BDH4", "ec_number_list": [], "go_molecular_function": "GO:0140693 molecular condensate scaffold activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005829 cytosol;GO:0005886 plasma membrane;GO:0005789 endoplasmic reticulum membrane;GO:0031209 SCAR complex", "go_biological_process": "GO:0009825 multidimensional cell growth;GO:0007015 actin filament organization;GO:0016477 cell migration;GO:0045087 innate immune response;GO:0000902 cell morphogenesis", "synthesized_glycan_count": 0, "hit_score": 1.8, "record_id": "Q5S2C4-1", "record_type": "protein", "filter_code": "0000000.0000101.010000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q5W9E7-1", "uniprot_id": [ { "id": "MUS81_ARATH", "url": "https://www.uniprot.org/uniprot/Q5W9E7", "type": "external" } ], "mass": 74056.0, "length": 659, "protein_name": "Crossover junction endonuclease MUS81", "gene_name": "MUS81", "organism": "Arabidopsis", "refseq_name": "Restriction endonuclease, type II-like superfamily protein", "refseq_ac": [ { "id": "NP_194816", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_194816", "type": "external" } ], "gene_names_uniprotkb": "MUS81; F6I18.220", "gene_names_refseq": "ARABIDOPSIS THALIANA MMS AND UV SENSITIVE 81; ATMUS81; F6I18.220; F6I18_220; MMS AND UV SENSITIVE 81; MUS81", "protein_names_uniprotkb": "Crossover junction endonuclease MUS81; 3.1.22.-; AtMUS81; Protein MMS AND UV SENSITIVE 81", "protein_names_refseq": "Restriction endonuclease, type II-like superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G30870)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "10617198;16945961;17208327;17327258;17696612;18182028;19339504;20971895;26704385;27862469", "class_list": "", "function": "Interacts with EME1 to form a DNA structure-specific endonuclease with substrate preference for branched DNA structures with a 5'-end at the branch nick. Typical substrates include 3'-flap structures, D-loops, replication forks, nicked Holliday junctions and also intact Holliday junctions with a reduced efficiency. May be required in mitosis for the processing of stalled or collapsed replication fork intermediates. Plays a role in DNA repair and in genotoxic stress-induced homologous recombination (HR) in somatic cells. Mediates a subset of meiotic recombination events that are insensitive to crossover interference. Together with SEND1, essential for the resolution of toxic replication structures to ensure genome stability, and to maintain telomere integrity and replication (PubMed:26704385)., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A1Z073;O65562", "ec_number_list": [], "go_molecular_function": "GO:0003677 DNA binding;GO:0046872 metal ion binding;GO:0008821 crossover junction DNA endonuclease activity", "go_cellular_component": "GO:0000794 condensed nuclear chromosome;GO:0005634 nucleus;GO:0005730 nucleolus;GO:0048476 Holliday junction resolvase complex", "go_biological_process": "GO:0000712 resolution of meiotic recombination intermediates;GO:0006312 mitotic recombination;GO:0006281 DNA repair;GO:0051301 cell division;GO:0000723 telomere maintenance", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "Q5W9E7-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q5XEN5-1", "uniprot_id": [ { "id": "MBD1_ARATH", "url": "https://www.uniprot.org/uniprot/Q5XEN5", "type": "external" } ], "mass": 23152.0, "length": 204, "protein_name": "Methyl-CpG-binding domain-containing protein 1", "gene_name": "MBD1", "organism": "Arabidopsis", "refseq_name": "methyl-CPG-binding domain 1", "refseq_ac": [ { "id": "NP_567667", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_567667", "type": "external" } ], "gene_names_uniprotkb": "MBD1; T12H17.130", "gene_names_refseq": "MBD1; methyl-CPG-binding domain 1", "protein_names_uniprotkb": "Methyl-CpG-binding domain-containing protein 1; AtMBD1; MBD01; Methyl-CpG-binding protein MBD1", "protein_names_refseq": "methyl-CPG-binding domain 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G22745)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "10617198;12954765;14605234;15010609;15888682;17208509;25561503;27862469", "class_list": "", "function": "Probable transcriptional regulator., [UniProtKB]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "O49655", "ec_number_list": [], "go_molecular_function": "GO:0008270 zinc ion binding;GO:0008327 methyl-CpG binding", "go_cellular_component": "GO:0005634 nucleus;GO:0000118 histone deacetylase complex;GO:0009507 chloroplast", "go_biological_process": "GO:0006351 DNA-templated transcription", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "Q5XEN5-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000001001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q5XEP9-1", "uniprot_id": [ { "id": "KCS2_ARATH", "url": "https://www.uniprot.org/uniprot/Q5XEP9", "type": "external" } ], "mass": 59528.0, "length": 528, "protein_name": "3-ketoacyl-CoA synthase 2", "gene_name": "KCS2", "organism": "Arabidopsis", "refseq_name": "3-ketoacyl-CoA synthase 2", "refseq_ac": [ { "id": "NP_171918", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_171918", "type": "external" } ], "gene_names_uniprotkb": "KCS2; DAISY; F20D22.1; KCS17", "gene_names_refseq": "3-ketoacyl-CoA synthase 2; F20D22.1; F20D22_1; KCS2", "protein_names_uniprotkb": "3-ketoacyl-CoA synthase 2; 2.3.1.199; Docosanoic acid synthase; KCS-2; VLCFA condensing enzyme 2; Very long-chain fatty acid condensing enzyme 2", "protein_names_refseq": "3-ketoacyl-CoA synthase 2", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G04220)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "11130712;12916765;14593172;15277688;18465198;18786002;19619160;22284369;25305760;27862469", "class_list": "", "function": "Mediates the synthesis of VLCFAs from 22 to 26 carbons in length (e.g. C22, C24, C26) (PubMed:15277688). Involved in the elongation of C20 fatty acid suberin precursors (PubMed:18786002). Functionally redundant with KCS20 in the two-carbon elongation of C22 fatty acids that is required for cuticular wax and root suberin biosynthesis (PubMed:19619160)., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O64485;Q56WE1;Q8VXW2", "ec_number_list": [ { "id": "2.3.1.199", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.1.199", "type": "external" }, { "id": "2.3.1.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.1.-", "type": "external" } ], "go_molecular_function": "GO:0009922 fatty acid elongase activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005783 endoplasmic reticulum;GO:0016020 membrane", "go_biological_process": "GO:0006970 response to osmotic stress;GO:0006633 fatty acid biosynthetic process;GO:0009611 response to wounding;GO:0010345 suberin biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "Q5XEP9-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q5XET5-1", "uniprot_id": [ { "id": "HESO1_ARATH", "url": "https://www.uniprot.org/uniprot/Q5XET5", "type": "external" } ], "mass": 57592.0, "length": 511, "protein_name": "Protein HESO1", "gene_name": "HESO1", "organism": "Arabidopsis", "refseq_name": "Nucleotidyltransferase family protein", "refseq_ac": [ { "id": "NP_001318386", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001318386", "type": "external" } ], "gene_names_uniprotkb": "HESO1; T5I7.4", "gene_names_refseq": "HEN1 suppressor 1; HESO1; T5I7.4; T5I7_4", "protein_names_uniprotkb": "Protein HESO1; 2.7.7.52; HEN1 suppressor 1; RNA uridylyltransferase", "protein_names_refseq": "Nucleotidyltransferase family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G39740)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "10617197;22464191;22464194;24733911;25928341;25928405;27862469;29654922;30364210", "class_list": "", "function": "Uridylates small RNAs to trigger their degradation (PubMed:22464191, PubMed:22464194, PubMed:25928341). Catalyzes the uridylation of 5' fragments produced by AGO1-mediated cleavage of miRNA target RNAs (PubMed:24733911). Acts synergistically with URT1 in unmethylated miRNA uridylation, leading to their degradation (PubMed:25928341). URT1 and HESO1 prefer substrates with different 3' end nucleotides and act cooperatively to tail different forms of the same miRNAs (PubMed:25928405). URT1 and HESO1 act sequentially, with URT1 mono-uridylating the miRNAs followed by their further uridylation by HESO1 (PubMed:25928405). URT1 and HESO1 are involved in the uridylation and clearance of RISC-generated 5' mRNA fragments (PubMed:30364210). Able to act on AGO1-bound miRNAs and the uridylated species stay associated with AGO1 (PubMed:24733911, PubMed:25928405)., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O22284;Q0WSQ3", "ec_number_list": [ { "id": "2.7.7.52", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.7.52", "type": "external" } ], "go_molecular_function": "GO:0016779 nucleotidyltransferase activity;GO:0050265 RNA uridylyltransferase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0000932 P-body", "go_biological_process": "GO:0031123 RNA 3'-end processing;GO:0010587 miRNA catabolic process", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "Q5XET5-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q5XEZ5-1", "uniprot_id": [ { "id": "OSC12_ARATH", "url": "https://www.uniprot.org/uniprot/Q5XEZ5", "type": "external" } ], "mass": 87894.0, "length": 771, "protein_name": "Hyperosmolality-gated Ca2+ permeable channel 1.2", "gene_name": "OSCA1.2", "organism": "Arabidopsis", "refseq_name": "ERD (early-responsive to dehydration stress) family protein", "refseq_ac": [ { "id": "NP_001078425", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001078425", "type": "external" } ], "gene_names_uniprotkb": "OSCA1.2; CSC1; F1N20.220", "gene_names_refseq": "F1N20.220; F1N20_220", "protein_names_uniprotkb": "Hyperosmolality-gated Ca2+ permeable channel 1.2; AtCSC1; AtOSCA1.2; Calcium permeable stress-gated cation channel 1", "protein_names_refseq": "ERD (early-responsive to dehydration stress) family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G22120)", "pathway_count": 1, "publication_count": 13, "publication_id_list": "10617198;20374526;23111157;24503647;25162526;27862469;30382938;30382939;30498218;38103547;38570680;38592763;39495104", "class_list": "", "function": "Acts as an osmosensitive calcium-permeable cation channel (PubMed:24503647, PubMed:30382938, PubMed:38592763, PubMed:30382939). Specifically conducts cations including Ca(2+), K(+) and Na(+) in vitro. Inactivation or closure of the channel is calcium-dependent (PubMed:24503647). Mechanosensitive ion channel that converts mechanical stimuli into a flow of ions: activated in response to membrane stretch and poke (PubMed:30382938, PubMed:38592763, PubMed:30382939, PubMed:38570680)., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 4, "reported_mutagensis": 9, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A097NUP4;O65460;Q56YV1", "ec_number_list": [], "go_molecular_function": "GO:0042802 identical protein binding;GO:0005227 calcium-activated cation channel activity;GO:0008381 mechanosensitive monoatomic ion channel activity", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "GO:0006812 monoatomic cation transport", "synthesized_glycan_count": 0, "hit_score": 1.4, "record_id": "Q5XEZ5-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q5XF07-1", "uniprot_id": [ { "id": "APE1L_ARATH", "url": "https://www.uniprot.org/uniprot/Q5XF07", "type": "external" } ], "mass": 41783.0, "length": 364, "protein_name": "DNA-(apurinic or apyrimidinic site) endonuclease", "gene_name": "APE1L", "organism": "Arabidopsis", "refseq_name": "DNAse I-like superfamily protein", "refseq_ac": [ { "id": "NP_566904", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_566904", "type": "external" } ], "gene_names_uniprotkb": "APE1L; T29H11.60", "gene_names_refseq": "", "protein_names_uniprotkb": "DNA-(apurinic or apyrimidinic site) endonuclease; 3.1.-.-; APEX1-like protein; Apurinic-apyrimidinic endonuclease", "protein_names_refseq": "DNAse I-like superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G48425)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "11130713;19172180;22060019;23111157;25228464;25561503;25569774;27862469", "class_list": "", "function": "Apurinic/apyrimidinic (AP) endonuclease involved in active DNA demethylation and gene imprinting (PubMed:25569774). According to a report, also displays an in vitro 3'-phosphatase activity (PubMed:25569774). According to another report, has no in vitro 3'-phosphatase activity (PubMed:25228464). Catalyzes the conversion of the 3'-blocking groups 3'-phosphor-alpha,beta-unsaturated aldehyde (3'-PUA) generated by ROS1 to 3'-OH (PubMed:25228464, PubMed:25569774). Has a strong non-specific affinity to DNA (PubMed:25228464). Redundant with APE2 and at least one functional allele is required for seed viability (PubMed:19172180)., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9STM2", "ec_number_list": [], "go_molecular_function": "GO:0046872 metal ion binding;GO:0003906 DNA-(apurinic or apyrimidinic site) endonuclease activity;GO:0008081 phosphoric diester hydrolase activity;GO:0008311 double-stranded DNA 3'-5' DNA exonuclease activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005730 nucleolus", "go_biological_process": "GO:0006284 base-excision repair", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "Q5XF07-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q5XF20-1", "uniprot_id": [ { "id": "U84A1_ARATH", "url": "https://www.uniprot.org/uniprot/Q5XF20", "type": "external" } ], "mass": 54481.0, "length": 490, "protein_name": "UDP-glycosyltransferase 84A1", "gene_name": "UGT84A1", "organism": "Arabidopsis", "refseq_name": "UDP-Glycosyltransferase superfamily protein", "refseq_ac": [ { "id": "NP_193283", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_193283", "type": "external" } ], "gene_names_uniprotkb": "UGT84A1; FCAALL.304; dl3780c", "gene_names_refseq": "DL3780C; FCAALL.304; UGT84A1", "protein_names_uniprotkb": "UDP-glycosyltransferase 84A1; 2.4.1.120; 2.4.1.177; AtHCAGT2; Hydroxycinnamate glucosyltransferase 2", "protein_names_refseq": "UDP-Glycosyltransferase superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G15480)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "10617198;11042211;11042215;11187886;12721858;14593172;27862469;9461215", "class_list": "glycogene;glycosyltransferase", "function": "UDP-glucosyltransferase that forms glucose esters with phenylpropanoids (PubMed:11042211, PubMed:11187886). Glucosylates 4-coumarate, ferulate, caffeate, sinapate and cinnamate (PubMed:11042211, PubMed:11187886). Can glucosylate the phytotoxic xenobiotic compound 2,4,5-trichlorophenol (TCP) (PubMed:12721858)., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O23400;Q8H0V7", "ec_number_list": [ { "id": "2.4.1.120", "url": "https://www.rhea-db.org/rhea/?query=ec:2.4.1.120", "type": "external" }, { "id": "2.4.1.177", "url": "https://www.rhea-db.org/rhea/?query=ec:2.4.1.177", "type": "external" }, { "id": "2.4.1.111", "url": "https://www.rhea-db.org/rhea/?query=ec:2.4.1.111", "type": "external" }, { "id": "2.4.1.126", "url": "https://www.rhea-db.org/rhea/?query=ec:2.4.1.126", "type": "external" } ], "go_molecular_function": "GO:0035251 UDP-glucosyltransferase activity;GO:0050284 sinapate 1-glucosyltransferase activity;GO:0080043 quercetin 3-O-glucosyltransferase activity;GO:0080044 quercetin 7-O-glucosyltransferase activity;GO:0047218 hydroxycinnamate 4-beta-glucosyltransferase activity", "go_cellular_component": "GO:0005737 cytoplasm", "go_biological_process": "GO:0009636 response to toxic substance;GO:0010224 response to UV-B", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "Q5XF20-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.11000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q5XF33-1", "uniprot_id": [ { "id": "CHLI2_ARATH", "url": "https://www.uniprot.org/uniprot/Q5XF33", "type": "external" } ], "mass": 46098.0, "length": 418, "protein_name": "Magnesium-chelatase subunit ChlI-2, chloroplastic", "gene_name": "CHLI2", "organism": "Arabidopsis", "refseq_name": "magnesium chelatase i2", "refseq_ac": [ { "id": "NP_199405", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_199405", "type": "external" } ], "gene_names_uniprotkb": "CHLI2; K15I22.13", "gene_names_refseq": "CHL I2; CHL12; CHLI-2; CHLI2; K15I22.13; K15I22_13; MAGNESIUM CHELATASE I2; magnesium chelatase i2", "protein_names_uniprotkb": "Magnesium-chelatase subunit ChlI-2, chloroplastic; 6.6.1.1; Mg-chelatase subunit I-2; Mg-protoporphyrin IX chelatase subunit ChlI-2", "protein_names_refseq": "magnesium chelatase i2", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G45930)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "10048488;11842180;14593172;18463617;18846282;19363094;20466843;22223895;27862469", "class_list": "", "function": "Involved in chlorophyll biosynthesis. Catalyzes the insertion of magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX. The reaction takes place in two steps, with an ATP-dependent activation followed by an ATP-dependent chelation step. Possesses low affinity for ATP and may play a limited role in chlorophyll biosynthesis, and contributes to the assembly of the Mg-chelatase complex., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 5, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q8L712;Q9FJ43", "ec_number_list": [ { "id": "6.6.1.1", "url": "https://www.rhea-db.org/rhea/?query=ec:6.6.1.1", "type": "external" } ], "go_molecular_function": "GO:0005524 ATP binding;GO:0016887 ATP hydrolysis activity;GO:0016851 magnesium chelatase activity", "go_cellular_component": "GO:0009507 chloroplast;GO:0009536 plastid;GO:0009570 chloroplast stroma;GO:0010007 magnesium chelatase complex", "go_biological_process": "GO:0015979 photosynthesis;GO:0015995 chlorophyll biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "Q5XF33-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q5XF51-1", "uniprot_id": [ { "id": "3MMP_ARATH", "url": "https://www.uniprot.org/uniprot/Q5XF51", "type": "external" } ], "mass": 43017.0, "length": 384, "protein_name": "Metalloendoproteinase 3-MMP", "gene_name": "3MMP", "organism": "Arabidopsis", "refseq_name": "Matrixin family protein", "refseq_ac": [ { "id": "NP_173824", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_173824", "type": "external" } ], "gene_names_uniprotkb": "3MMP; F3I6.6", "gene_names_refseq": "F3I6.6; F3I6_6", "protein_names_uniprotkb": "Metalloendoproteinase 3-MMP; 3.4.24.-; At3-MMP", "protein_names_refseq": "Matrixin family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G24140)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "10574937;11130712;24156403;27862469", "class_list": "", "function": "Matrix metalloproteinases (MMPs) or matrixins may play a role in the degradation and remodeling of the extracellular matrix (ECM) during development or in response to stresses (By similarity). Active on McaPLGLDpaAR-NH(2) (QF24) and beta-casein and, to some extent, on myelin basic protein (MBP) (PubMed:24156403)., [UniProtKB, UniProtKB, PubMed]", "predicted_glycosites": 8, "predicted_n_glycosites": 8, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 8, "binding_glycan_count": 0, "secondary_ac_list": "O48680", "ec_number_list": [], "go_molecular_function": "GO:0004222 metalloendopeptidase activity;GO:0008270 zinc ion binding", "go_cellular_component": "GO:0005576 extracellular region;GO:0005886 plasma membrane;GO:0016020 membrane;GO:0031012 extracellular matrix;GO:0098552 side of membrane", "go_biological_process": "GO:0006508 proteolysis;GO:0030198 extracellular matrix organization;GO:0030574 collagen catabolic process;GO:0050832 defense response to fungus", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "Q5XF51-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000010000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q5XF78-1", "uniprot_id": [ { "id": "GAMT2_ARATH", "url": "https://www.uniprot.org/uniprot/Q5XF78", "type": "external" } ], "mass": 43349.0, "length": 387, "protein_name": "Gibberellic acid methyltransferase 2", "gene_name": "GAMT2", "organism": "Arabidopsis", "refseq_name": "gibberellic acid methyltransferase 2", "refseq_ac": [ { "id": "NP_200441", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_200441", "type": "external" } ], "gene_names_uniprotkb": "GAMT2; MCD7.2", "gene_names_refseq": "GAMT2; MCD7.2; MCD7_2; gibberellic acid methyltransferase 2", "protein_names_uniprotkb": "Gibberellic acid methyltransferase 2; 2.1.1.276; Gibberellin A(4) carboxyl methyltransferase", "protein_names_refseq": "gibberellic acid methyltransferase 2", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G56300)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "14617060;17220201;27862469;9628582", "class_list": "", "function": "Methylates the carboxyl group of several gibberellins (GAs). Substrate preference is GA4 > GA34 > GA9 > GA3 > GA1 > GA51 > GA20. No activity with diterpenes abietic acid and ent-kaurenoic acid., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9FMA2", "ec_number_list": [ { "id": "2.1.1.276", "url": "https://www.rhea-db.org/rhea/?query=ec:2.1.1.276", "type": "external" } ], "go_molecular_function": "GO:0046872 metal ion binding;GO:0008757 S-adenosylmethionine-dependent methyltransferase activity;GO:0010341 gibberellin carboxyl-O-methyltransferase activity;GO:0102118 gibberellin A4 carboxyl methyltransferase activity", "go_cellular_component": "", "go_biological_process": "GO:0032259 methylation", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "Q5XF78-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q5XPJ9-1", "uniprot_id": [ { "id": "SCAR2_ARATH", "url": "https://www.uniprot.org/uniprot/Q5XPJ9", "type": "external" } ], "mass": 151585.0, "length": 1399, "protein_name": "Protein SCAR2", "gene_name": "SCAR2", "organism": "Arabidopsis", "refseq_name": "SCAR homolog 2", "refseq_ac": [ { "id": "NP_181378", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_181378", "type": "external" } ], "gene_names_uniprotkb": "SCAR2; DIS3; ITB1; T19C21.7; WAVE4", "gene_names_refseq": "ATSCAR2; DIS3; IRREGULAR TRICHOME BRANCH1; ITB1; SCAR HOMOLOG 2; SCAR homolog 2; SCAR2; T19C21.7; T19C21_7; WAVE4", "protein_names_uniprotkb": "Protein SCAR2; AtSCAR2; Protein DISTORTED 3; Protein IRREGULAR TRICHOME BRANCH 1; Protein WAVE4", "protein_names_refseq": "SCAR homolog 2", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G38440)", "pathway_count": 1, "publication_count": 13, "publication_id_list": "10617197;15296761;15316111;15534215;15659634;16006582;17267444;22060019;23572148;23776212;25561503;27862469;28011693", "class_list": "", "function": "Involved in regulation of actin and microtubule organization. Part of a WAVE complex that activates the Arp2/3 complex. Regulates trichome branch positioning and expansion., [UniProtKB, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 13, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O80907", "ec_number_list": [], "go_molecular_function": "GO:0003779 actin binding;GO:0034237 protein kinase A regulatory subunit binding;GO:0071933 Arp2/3 complex binding", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005856 cytoskeleton;GO:0031209 SCAR complex", "go_biological_process": "GO:0030036 actin cytoskeleton organization;GO:0098609 cell-cell adhesion;GO:2000601 positive regulation of Arp2/3 complex-mediated actin nucleation;GO:0045010 actin nucleation;GO:0051127 positive regulation of actin nucleation", "synthesized_glycan_count": 0, "hit_score": 1.4, "record_id": "Q5XPJ9-1", "record_type": "protein", "filter_code": "0000000.0100101.010000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q5XQC7-1", "uniprot_id": [ { "id": "BON3_ARATH", "url": "https://www.uniprot.org/uniprot/Q5XQC7", "type": "external" } ], "mass": 64202.0, "length": 584, "protein_name": "Protein BONZAI 3", "gene_name": "BON3", "organism": "Arabidopsis", "refseq_name": "Calcium-dependent phospholipid-binding Copine family protein", "refseq_ac": [ { "id": "NP_172362", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_172362", "type": "external" } ], "gene_names_uniprotkb": "BON3; F7G19.25", "gene_names_refseq": "BON3; BONZAI 3; F7G19.25; F7G19_25", "protein_names_uniprotkb": "Protein BONZAI 3", "protein_names_refseq": "Calcium-dependent phospholipid-binding Copine family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G08860)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "11130712;16367962;17147637;17631528;19522566;27862469", "class_list": "", "function": "Negative regulator of cell death and defense responses. Repress a number of R genes and may have effects in promoting growth and development. May function in membrane trafficking and in fusion of vesicles with plasma membrane (By similarity)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O04042;Q1KS96", "ec_number_list": [], "go_molecular_function": "GO:0046872 metal ion binding;GO:0005544 calcium-dependent phospholipid binding", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "GO:0006952 defense response;GO:0071277 cellular response to calcium ion;GO:0043069 negative regulation of programmed cell death;GO:0090332 stomatal closure", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q5XQC7-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q5XVC4-1", "uniprot_id": [ { "id": "MDP60_ARATH", "url": "https://www.uniprot.org/uniprot/Q5XVC4", "type": "external" } ], "mass": 56173.0, "length": 488, "protein_name": "Microtubule-destabilizing protein 60", "gene_name": "MDP60", "organism": "Arabidopsis", "refseq_name": "TPX2 (targeting protein for Xklp2) protein family", "refseq_ac": [ { "id": "NP_186749", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_186749", "type": "external" } ], "gene_names_uniprotkb": "MDP60; EL3N.1", "gene_names_refseq": "TEL3N.1; TEL3N_1", "protein_names_uniprotkb": "Microtubule-destabilizing protein 60", "protein_names_refseq": "TPX2 (targeting protein for Xklp2) protein family", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G01015)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "11130713;16244158;17147637;27862469;29167353;31638649", "class_list": "", "function": "Binds directly to microtubules (PubMed:29167353). Microtubule-destabilizing protein involved in the PIF3-dependent positive regulation of hypocotyl cell elongation via the modulation of cortical microtubules dynamic in response to light and ethylene signaling (PubMed:29167353, PubMed:31638649). Promotes submergence-induced and ethylene-dependent underwater hypocotyl elongation (PubMed:31638649)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A178VFR0;Q9C7U3", "ec_number_list": [], "go_molecular_function": "GO:0008017 microtubule binding;GO:0043539 protein serine/threonine kinase activator activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005819 spindle;GO:0005880 nuclear microtubule", "go_biological_process": "GO:0090307 mitotic spindle assembly;GO:0060236 regulation of mitotic spindle organization;GO:0009416 response to light stimulus;GO:0007019 microtubule depolymerization;GO:0009826 unidimensional cell growth", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q5XVC4-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q5XVF0-1", "uniprot_id": [ { "id": "MEE12_ARATH", "url": "https://www.uniprot.org/uniprot/Q5XVF0", "type": "external" } ], "mass": 75475.0, "length": 666, "protein_name": "TATA box-binding protein-associated factor RNA polymerase I subunit B", "gene_name": "MEE12", "organism": "Arabidopsis", "refseq_name": "maternal effect embryo arrest 12", "refseq_ac": [ { "id": "NP_671769", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_671769", "type": "external" } ], "gene_names_uniprotkb": "MEE12; CCG; T17M13", "gene_names_refseq": "MEE12; maternal effect embryo arrest 12", "protein_names_uniprotkb": "TATA box-binding protein-associated factor RNA polymerase I subunit B; Central cell guidance protein; Protein MATERNAL EFFECT EMBRYO ARREST 12; TATA box-binding protein-associated factor 1B; TBP-associated factor 1B", "protein_names_refseq": "maternal effect embryo arrest 12", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G02955)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "10617197;15634699;18055609;26462908;27862469", "class_list": "", "function": "Component of RNA polymerase I core factor complex that acts as a GTF2B/TFIIB-like factor and plays a key role in multiple steps during transcription initiation such as pre-initiation complex (PIC) assembly and postpolymerase recruitment events in polymerase I (Pol I) transcription. Binds rDNA promoters and plays a role in Pol I recruitment (By similarity). Required for the development of the one-cell zygote and endosperm in embryos (PubMed:15634699). Required for micropylar pollen tube guidance, but has no effect on ovule development and gametophytic cell fate specification (PubMed:18055609). May regulate the transcription of secreted cysteine-rich peptide (CRP) genes in the embryo sac (PubMed:26462908)., [UniProtKB, UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "Q5XVE8;Q5XVE9", "ec_number_list": [], "go_molecular_function": "GO:0008270 zinc ion binding;GO:0001164 RNA polymerase I core promoter sequence-specific DNA binding", "go_cellular_component": "GO:0005634 nucleus;GO:0070860 RNA polymerase I core factor complex", "go_biological_process": "GO:0042790 nucleolar large rRNA transcription by RNA polymerase I;GO:0001188 RNA polymerase I preinitiation complex assembly;GO:0009793 embryo development ending in seed dormancy", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q5XVF0-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q5YDB6-1", "uniprot_id": [ { "id": "CPL1_ARATH", "url": "https://www.uniprot.org/uniprot/Q5YDB6", "type": "external" } ], "mass": 108421.0, "length": 967, "protein_name": "RNA polymerase II C-terminal domain phosphatase-like 1", "gene_name": "CPL1", "organism": "Arabidopsis", "refseq_name": "C-terminal domain phosphatase-like 1", "refseq_ac": [ { "id": "NP_193898", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_193898", "type": "external" } ], "gene_names_uniprotkb": "CPL1; F17L22.130; FRY2; JOE1; SHI4", "gene_names_refseq": "ATCPL1; ATCPL2; C-TERMINAL DOMAIN PHOSPHATASE-LIKE 1; C-terminal domain phosphatase-like 1; CPL1; F17L22.130; F17L22_130; FIERY 2; FRY2; RCF2; SHI4; SHINY 4; regulators of C-REPEAT BINDING FACTOR (CBF) gene expression 2", "protein_names_uniprotkb": "RNA polymerase II C-terminal domain phosphatase-like 1; 3.1.3.16; AtCPL1; CTD phosphatase-like 1; Carboxyl-terminal phosphatase-like 1; FCP-like 1; Protein FIERY 2; Protein JASMONATE OVEREXPRESSING 1; Protein SHINY 4", "protein_names_refseq": "C-terminal domain phosphatase-like 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G21670)", "pathway_count": 1, "publication_count": 20, "publication_id_list": "10617198;11874572;12149434;12149453;15388846;18156295;18506580;18541146;18764923;20466843;23111157;23776212;23874224;24146632;24303021;25561503;26227967;26512101;26887918;27862469", "class_list": "", "function": "Processively dephosphorylates 'Ser-5' but not 'Ser-2' of the heptad repeats YSPTSPS in the C-terminal domain of the largest RNA polymerase II subunit (RPB1). This promotes the activity of RNA polymerase II. Together with CPL2, required for male gametes fertility. Multifunctional regulator that modulates plant growth, stress, and phytohormones responses. Negative regulator of stress gene transcription involved in abscisic acid (ABA) mediated and jasmonic acid (JA) mediated signaling pathways, NaCl, osmotic stress, wounding, and cold resistance. Negatively regulates the expression of jasmonic acid (JA) biosynthetic genes in response to wounding (PubMed:11874572, PubMed:12149434, PubMed:12149453, PubMed:15388846, PubMed:18506580, PubMed:18764923). Forms a complex with RCF3 that modulates co-transcriptional processes such as mRNA capping and polyadenylation, and functions to repress stress-inducible gene expression (PubMed:23874224). Dephosphorylates RCF3 (PubMed:26227967). Involved in the dephosphorylation of EIF4A3. This dephosphorylation retains EIF4A3 in the nucleus and limits its accumulation in the cytoplasm. Is essential for the degradation of the nonsense-mediated mRNA decay (NMD) transcripts (PubMed:26887918)., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 7, "reported_mutagensis": 2, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q0WNZ7;Q56WT8;Q9SVT0", "ec_number_list": [ { "id": "3.1.3.16", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.16", "type": "external" }, { "id": "3.1.3.27", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.27", "type": "external" }, { "id": "3.1.3.48", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.48", "type": "external" }, { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.7.13.3", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.13.3", "type": "external" } ], "go_molecular_function": "GO:0003677 DNA binding;GO:0003723 RNA binding;GO:0046872 metal ion binding;GO:0004722 protein serine/threonine phosphatase activity;GO:0004721 phosphoprotein phosphatase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0016607 nuclear speck", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0045892 negative regulation of DNA-templated transcription;GO:0009611 response to wounding;GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay;GO:0009651 response to salt stress", "synthesized_glycan_count": 0, "hit_score": 2.1, "record_id": "Q5YDB6-1", "record_type": "protein", "filter_code": "0000000.0100101.010000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q5YGP7-1", "uniprot_id": [ { "id": "PLET2_ARATH", "url": "https://www.uniprot.org/uniprot/Q5YGP7", "type": "external" } ], "mass": 62233.0, "length": 568, "protein_name": "AP2-like ethylene-responsive transcription factor PLT2", "gene_name": "PLT2", "organism": "Arabidopsis", "refseq_name": "Integrase-type DNA-binding superfamily protein", "refseq_ac": [ { "id": "NP_175530", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_175530", "type": "external" } ], "gene_names_uniprotkb": "PLT2; AIL4; F11M15.6", "gene_names_refseq": "F11M15.6; F11M15_6; PLETHORA 2; PLT2", "protein_names_uniprotkb": "AP2-like ethylene-responsive transcription factor PLT2; Protein AINTEGUMENTA-LIKE 4; Protein PLETHORA 2", "protein_names_refseq": "Integrase-type DNA-binding superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G51190)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "11130712;15454085;15635403;15988559;16407444;16424342;20190735;20798316;27862469;31801996", "class_list": "", "function": "Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). Master regulator of basal/root fate. Essential for root quiescent center (QC) and columella specification, stem cell activity, as well as for establishment of the stem cell niche during embryogenesis. Modulates the root polar auxin transport by regulating the distribution of PIN genes. Essential role in respecifying pattern and polarity in damaged roots. Direct target of the transcriptional corepressor TPL. Expression levels and patterns regulated post-transcriptionally by root meristem growth factors (RGFs)., [UniProtKB, PubMed, UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q6PQQ7;Q9SYC2", "ec_number_list": [], "go_molecular_function": "GO:0003677 DNA binding;GO:0003700 DNA-binding transcription factor activity", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0000723 telomere maintenance;GO:0019827 stem cell population maintenance;GO:0009414 response to water deprivation;GO:0007389 pattern specification process", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "Q5YGP7-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q5YGP8-1", "uniprot_id": [ { "id": "PLET1_ARATH", "url": "https://www.uniprot.org/uniprot/Q5YGP8", "type": "external" } ], "mass": 62875.0, "length": 574, "protein_name": "AP2-like ethylene-responsive transcription factor PLT1", "gene_name": "PLT1", "organism": "Arabidopsis", "refseq_name": "Integrase-type DNA-binding superfamily protein", "refseq_ac": [ { "id": "NP_188720", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_188720", "type": "external" } ], "gene_names_uniprotkb": "PLT1; AIL3; MOE17.15", "gene_names_refseq": "PLETHORA 1; PLT1", "protein_names_uniprotkb": "AP2-like ethylene-responsive transcription factor PLT1; Protein AINTEGUMENTA-LIKE 3; Protein PLETHORA 1", "protein_names_refseq": "Integrase-type DNA-binding superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G20840)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "10819329;15454085;15635403;15988559;16407444;16424342;20190735;20798316;27862469", "class_list": "", "function": "Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). Master regulator of basal/root fate. Essential for root quiescent center (QC) and columella specification, stem cell activity, as well as for establishment of the stem cell niche during embryogenesis. Modulates the root polar auxin transport by regulating the distribution of PIN genes. Essential role in respecifying pattern and polarity in damaged roots. Direct target of the transcriptional corepressor TPL. Expression levels and patterns regulated post-transcriptionally by root meristem growth factors (RGFs)., [UniProtKB, PubMed, UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q6PQQ6;Q9LT37", "ec_number_list": [], "go_molecular_function": "GO:0003700 DNA-binding transcription factor activity;GO:0000976 transcription cis-regulatory region binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0000723 telomere maintenance;GO:0019827 stem cell population maintenance;GO:0009414 response to water deprivation;GO:0007389 pattern specification process", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "Q5YGP8-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q64FQ2-1", "uniprot_id": [ { "id": "PID2_ARATH", "url": "https://www.uniprot.org/uniprot/Q64FQ2", "type": "external" } ], "mass": 59294.0, "length": 525, "protein_name": "Protein kinase PINOID 2", "gene_name": "PID2", "organism": "Arabidopsis", "refseq_name": "AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein", "refseq_ac": [ { "id": "NP_180238", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_180238", "type": "external" } ], "gene_names_uniprotkb": "PID2; AGC1-10; F18A8.7", "gene_names_refseq": "F18A8.7; F18A8_7; PID2; PINOID2", "protein_names_uniprotkb": "Protein kinase PINOID 2; 2.7.11.1; Protein kinase AGC1-10", "protein_names_refseq": "AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G26700)", "pathway_count": 1, "publication_count": 3, "publication_id_list": "10617197;19075219;27862469", "class_list": "", "function": "Serine/threonine-protein kinase involved in the regulation of auxin signaling. Plays a minor role in the regulation of cellular auxin efflux and cotyledon organogenesis., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O48785;Q0WP71", "ec_number_list": [ { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.3.2.27", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.2.27", "type": "external" }, { "id": "2.7.10.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.-", "type": "external" }, { "id": "3.1.4.46", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.4.46", "type": "external" }, { "id": "2.7.11.25", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.25", "type": "external" }, { "id": "2.7.11.22", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.22", "type": "external" }, { "id": "2.7.10.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.1", "type": "external" }, { "id": "2.7.11.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.-", "type": "external" }, { "id": "2.7.11.24", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.24", "type": "external" }, { "id": "2.7.12.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.1", "type": "external" }, { "id": "2.7.11.23", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.23", "type": "external" }, { "id": "2.7.12.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.2", "type": "external" }, { "id": "2.7.-.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.-.-", "type": "external" }, { "id": "3.1.26.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.26.-", "type": "external" }, { "id": "3.1.3.16", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.16", "type": "external" }, { "id": "2.7.11.34", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.34", "type": "external" }, { "id": "4.6.1.2", "url": "https://www.rhea-db.org/rhea/?query=ec:4.6.1.2", "type": "external" } ], "go_molecular_function": "GO:0004674 protein serine/threonine kinase activity;GO:0005524 ATP binding;GO:0016301 kinase activity;GO:0106310 protein serine kinase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005886 plasma membrane;GO:0009507 chloroplast", "go_biological_process": "GO:0009734 auxin-activated signaling pathway;GO:0048825 cotyledon development", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "Q64FQ2-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q66GN2-1", "uniprot_id": [ { "id": "LRK64_ARATH", "url": "https://www.uniprot.org/uniprot/Q66GN2", "type": "external" } ], "mass": 76735.0, "length": 691, "protein_name": "Lectin-domain containing receptor kinase VI.4", "gene_name": "LECRK64", "organism": "Arabidopsis", "refseq_name": "lectin receptor kinase a4.3", "refseq_ac": [ { "id": "NP_195776", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_195776", "type": "external" } ], "gene_names_uniprotkb": "LECRK64; F7A7.80; LECRKA4.3", "gene_names_refseq": "F7A7.80; F7A7_80; L-type lectin receptor kinase VI.4; LECRKA4.3; LecRK-VI.4; lectin receptor kinase a4.3", "protein_names_uniprotkb": "Lectin-domain containing receptor kinase VI.4; 2.7.11.1; LecRK-VI.4; Lectin receptor kinase A4.3", "protein_names_refseq": "lectin receptor kinase a4.3", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G01560)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "11130714;18987212;19773388;23111157;27419465;27862469;28011693", "class_list": "", "function": "Involved in negative regulation of abscisic acid response in seed germination., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9M019", "ec_number_list": [ { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.3.2.27", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.2.27", "type": "external" }, { "id": "2.7.10.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.-", "type": "external" }, { "id": "3.1.4.46", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.4.46", "type": "external" }, { "id": "2.7.11.25", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.25", "type": "external" }, { "id": "2.7.11.22", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.22", "type": "external" }, { "id": "2.7.10.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.1", "type": "external" }, { "id": "2.7.11.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.-", "type": "external" }, { "id": "2.7.11.24", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.24", "type": "external" }, { "id": "2.7.12.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.1", "type": "external" }, { "id": "2.7.11.23", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.23", "type": "external" }, { "id": "2.7.12.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.2", "type": "external" }, { "id": "2.7.-.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.-.-", "type": "external" }, { "id": "3.1.26.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.26.-", "type": "external" }, { "id": "3.1.3.16", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.16", "type": "external" }, { "id": "2.7.11.34", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.34", "type": "external" }, { "id": "4.6.1.2", "url": "https://www.rhea-db.org/rhea/?query=ec:4.6.1.2", "type": "external" } ], "go_molecular_function": "GO:0005524 ATP binding;GO:0030246 carbohydrate binding;GO:0004675 transmembrane receptor protein serine/threonine kinase activity;GO:0106310 protein serine kinase activity", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "GO:0042742 defense response to bacterium;GO:0002229 defense response to oomycetes;GO:0009738 abscisic acid-activated signaling pathway;GO:0009845 seed germination", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q66GN2-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q66GP9-1", "uniprot_id": [ { "id": "NOA1_ARATH", "url": "https://www.uniprot.org/uniprot/Q66GP9", "type": "external" } ], "mass": 61957.0, "length": 561, "protein_name": "NO-associated protein 1, chloroplastic/mitochondrial", "gene_name": "NOA1", "organism": "Arabidopsis", "refseq_name": "P-loop containing nucleoside triphosphate hydrolases superfamily protein", "refseq_ac": [ { "id": "NP_190329", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_190329", "type": "external" } ], "gene_names_uniprotkb": "NOA1; NOS1; RIF1; T21L8.200", "gene_names_refseq": "ATNOA1; ATNOS1; NITRIC OXIDE SYNTHASE 1; NO ASSOCIATED 1; NOA1; NOS1; RESISTANT TO INHIBITION WITH FOSMIDOMYCIN 1; RIF1", "protein_names_uniprotkb": "NO-associated protein 1, chloroplastic/mitochondrial; 1.14.13.39; AtNOA1; AtNOS1; Dubious mitochondrial nitric oxide synthase 1; GTPase NOA1; Protein RESISTANT TO INHIBITION BY FOSMIDOMYCIN 1", "protein_names_refseq": "P-loop containing nucleoside triphosphate hydrolases superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G47450)", "pathway_count": 1, "publication_count": 15, "publication_id_list": "11130713;14526079;15498873;16272429;16356941;16690168;17220360;17351048;18469163;18801746;19168714;19321706;20657186;21392840;27862469", "class_list": "", "function": "Exhibits cGTPase activity; binds and hydrolyzes specifically GTP (PubMed:18801746). May participate in ribosome assembly and stability and thus regulates protein synthesis in chloroplasts. The GTPase activity requires MgCl(2)and the presence of either KCl or (NH(4))(2)SO(4). Involved in the post-transcriptional regulation of the methylerythritol phosphate (MEP) pathway. Involved in chlorophyll-a fluorescence regulation., [UniProtKB, PubMed]; May mediate the production or accumulation of nitric oxide (NO) which is a messenger molecule involved in hormonal signaling and defense responses in plant (PubMed:14526079, PubMed:16272429, PubMed:16690168, PubMed:17351048). Acts as an antisenescence agent. Plays a crucial role in both extracellular calmodulin (ExtCaM)-triggered and salicylic acid (SA)-mediated H(2)O(2)-dependent stomatal closure., [UniProtKB]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "F4JBJ3;Q0WWY8;Q157M8;Q9STX8", "ec_number_list": [ { "id": "1.14.13.39", "url": "https://www.rhea-db.org/rhea/?query=ec:1.14.13.39", "type": "external" } ], "go_molecular_function": "GO:0003924 GTPase activity;GO:0005525 GTP binding;GO:0016491 oxidoreductase activity", "go_cellular_component": "GO:0005739 mitochondrion;GO:0009507 chloroplast", "go_biological_process": "GO:0006979 response to oxidative stress;GO:0009651 response to salt stress;GO:0006809 nitric oxide biosynthetic process;GO:0051246 regulation of protein metabolic process;GO:0010193 response to ozone", "synthesized_glycan_count": 0, "hit_score": 1.6, "record_id": "Q66GP9-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q66GQ5-1", "uniprot_id": [ { "id": "RWA3_ARATH", "url": "https://www.uniprot.org/uniprot/Q66GQ5", "type": "external" } ], "mass": 63331.0, "length": 540, "protein_name": "Protein REDUCED WALL ACETYLATION 3", "gene_name": "RWA3", "organism": "Arabidopsis", "refseq_name": "O-acetyltransferase family protein", "refseq_ac": [ { "id": "NP_001031478", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001031478", "type": "external" } ], "gene_names_uniprotkb": "RWA3; F13P17.23", "gene_names_refseq": "F13P17.23; REDUCED WALL ACETYLATION 3; RWA3", "protein_names_uniprotkb": "Protein REDUCED WALL ACETYLATION 3; 2.3.1.-", "protein_names_refseq": "O-acetyltransferase family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G34410)", "pathway_count": 1, "publication_count": 19, "publication_id_list": "10617197;18463617;19245862;19376835;19423640;20466843;21212300;21673009;21768351;23111157;23328941;23572148;23660473;24019426;24043427;25561503;27419465;27862469;30833711", "class_list": "", "function": "Probable O-acetyltransferase involved in the acetylation of xylan during secondary wall biosynthesis., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 3, "predicted_n_glycosites": 2, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 3, "binding_glycan_count": 0, "secondary_ac_list": "F4IHV6;O64704", "ec_number_list": [], "go_molecular_function": "GO:0016491 oxidoreductase activity;GO:0016407 acetyltransferase activity", "go_cellular_component": "GO:0000139 Golgi membrane;GO:0005794 Golgi apparatus;GO:0009507 chloroplast", "go_biological_process": "GO:0009834 plant-type secondary cell wall biogenesis;GO:0010411 xyloglucan metabolic process;GO:0045491 xylan metabolic process;GO:0045492 xylan biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 2.0, "record_id": "Q66GQ5-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000011001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q66GR6-1", "uniprot_id": [ { "id": "WHY3_ARATH", "url": "https://www.uniprot.org/uniprot/Q66GR6", "type": "external" } ], "mass": 29728.0, "length": 268, "protein_name": "Single-stranded DNA-binding protein WHY3, chloroplastic", "gene_name": "WHY3", "organism": "Arabidopsis", "refseq_name": "ssDNA-binding transcriptional regulator", "refseq_ac": [ { "id": "NP_178377", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_178377", "type": "external" } ], "gene_names_uniprotkb": "WHY3; PTAC11; T20F6.12", "gene_names_refseq": "A. THALIANA WHIRLY 3; ATWHY3; PLASTID TRANSCRIPTIONALLY ACTIVE11; PTAC11; T20F6.12; T20F6_12; WHIRLY 3; WHY3", "protein_names_uniprotkb": "Single-stranded DNA-binding protein WHY3, chloroplastic; AtWHY3; Protein PLASTID TRANSCRIPTIONALLY ACTIVE 11; Protein WHIRLY 3", "protein_names_refseq": "ssDNA-binding transcriptional regulator", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G02740)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "10617197;15708347;15967440;19666500;19669906;20551348;21911368;27862469", "class_list": "", "function": "Single-stranded DNA-binding protein that functions in both chloroplasts and nucleus. In chloroplasts, maintains plastid genome stability by preventing break-induced and short homology-dependent illegitimate recombinations. In the nucleus, is recruited to a distal element upstream of the kinesin KP1 to mediate the transcriptional repression of KP1. Can bind double-stranded DNA in vivo., [UniProtKB, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A8MR64;O64508;Q0WLJ4", "ec_number_list": [], "go_molecular_function": "GO:0003677 DNA binding;GO:0003729 mRNA binding;GO:0003697 single-stranded DNA binding", "go_cellular_component": "GO:0005739 mitochondrion;GO:1990391 DNA repair complex;GO:0009507 chloroplast;GO:0009570 chloroplast stroma;GO:0042644 chloroplast nucleoid", "go_biological_process": "GO:0006281 DNA repair;GO:0006351 DNA-templated transcription;GO:0006952 defense response;GO:0006355 regulation of DNA-templated transcription;GO:0009863 salicylic acid mediated signaling pathway", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "Q66GR6-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q66WT5-1", "uniprot_id": [ { "id": "SGR2_ARATH", "url": "https://www.uniprot.org/uniprot/Q66WT5", "type": "external" } ], "mass": 30753.0, "length": 271, "protein_name": "Magnesium dechelatase SGR2, chloroplastic", "gene_name": "SGR2", "organism": "Arabidopsis", "refseq_name": "STAY-GREEN-like protein", "refseq_ac": [ { "id": "NP_192928", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_192928", "type": "external" } ], "gene_names_uniprotkb": "SGR2; NYE2; SGN2; T26M18.120", "gene_names_refseq": "NONYELLOWING 2; NYE2; SGR2; STAY-GREEN 2; T26M18.120; T26M18_120", "protein_names_uniprotkb": "Magnesium dechelatase SGR2, chloroplastic; 4.99.1.10; Protein NONYELLOWING 2; Protein STAY-GREEN 2; Protein STAYGREEN 2", "protein_names_refseq": "STAY-GREEN-like protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G11910)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "10617198;17468209;17513504;18301989;24043799;24719469;26732493;27604697;27862469;28873256", "class_list": "", "function": "Magnesium chelatase involved in chlorophyll a degradation in the chlorophyll-protein complexes of photosystem I (PSI) and photosystem II (PSII) (PubMed:26732493, PubMed:27604697). Contributes to the degradation of PSI and PSII in the thylakoid membranes (PubMed:26732493, PubMed:27604697). Required to trigger chlorophyll degradation during natural and dark-induced leaf senescence (Probable) (PubMed:26732493). Mediates chlorophyll degradation during embryo degreening (PubMed:24043799, PubMed:26732493, PubMed:28873256). Recombinant SGR2 possesses high dechelating activity against chlorophyll a, very low activity against chlorophyllide a, and no activity against chlorophyll b (PubMed:27604697)., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9T059", "ec_number_list": [ { "id": "4.99.1.10", "url": "https://www.rhea-db.org/rhea/?query=ec:4.99.1.10", "type": "external" } ], "go_molecular_function": "GO:0016829 lyase activity", "go_cellular_component": "GO:0009535 chloroplast thylakoid membrane;GO:0009507 chloroplast;GO:0055035 plastid thylakoid membrane", "go_biological_process": "GO:0015996 chlorophyll catabolic process;GO:1903647 negative regulation of chlorophyll catabolic process", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "Q66WT5-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q67XG0-1", "uniprot_id": [ { "id": "GLB3_ARATH", "url": "https://www.uniprot.org/uniprot/Q67XG0", "type": "external" } ], "mass": 20197.0, "length": 175, "protein_name": "Two-on-two hemoglobin-3", "gene_name": "GLB3", "organism": "Arabidopsis", "refseq_name": "hemoglobin 3", "refseq_ac": [ { "id": "NP_567901", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_567901", "type": "external" } ], "gene_names_uniprotkb": "GLB3; F4D11.110", "gene_names_refseq": "ARABIDOPSIS HEMOGLOBIN 3; ATGLB3; F4D11.1; GLB3; hemoglobin 3", "protein_names_uniprotkb": "Two-on-two hemoglobin-3; 2-on-2 hemoglobin-3; AtGLB3", "protein_names_refseq": "hemoglobin 3", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G32690)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "10617198;11526234;21741261;24816109;27497447;27862469", "class_list": "", "function": "Hemoglobin-like protein that exhibits an unusual concentration-independent binding of O(2) and CO. May promote shoot organogenesis from root explants in vitro (PubMed:11526234, PubMed:21741261). Inhibits RGLG3 and RGLG4 ubiquitination activity (PubMed:27497447)., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O65532;Q946U7", "ec_number_list": [], "go_molecular_function": "GO:0046872 metal ion binding;GO:0020037 heme binding;GO:0019825 oxygen binding;GO:0005344 oxygen carrier activity", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "GO:0001666 response to hypoxia;GO:0015671 oxygen transport;GO:0009733 response to auxin", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q67XG0-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q67XT3-1", "uniprot_id": [ { "id": "SPC24_ARATH", "url": "https://www.uniprot.org/uniprot/Q67XT3", "type": "external" } ], "mass": 23332.0, "length": 201, "protein_name": "Kinetochore protein SPC24 homolog", "gene_name": "SPC24", "organism": "Arabidopsis", "refseq_name": "plectin-like protein", "refseq_ac": [ { "id": "NP_187500", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_187500", "type": "external" } ], "gene_names_uniprotkb": "SPC24; MUN; T16O11.19", "gene_names_refseq": "", "protein_names_uniprotkb": "Kinetochore protein SPC24 homolog; AtSPC24; Protein MERISTEM UNSTRUCTURED", "protein_names_refseq": "plectin-like protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G08880)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "11130713;14593172;27862469;29356153;30833711", "class_list": "", "function": "Acts as a component of the essential kinetochore-associated NDC80 complex, which is required for chromosome segregation and spindle checkpoint activity to ensure proper cell division. Required for the maintenance of plant architecture., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9SR88", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0031262 Ndc80 complex;GO:0005634 nucleus;GO:0000776 kinetochore", "go_biological_process": "GO:0051301 cell division;GO:0051781 positive regulation of cell division;GO:0051983 regulation of chromosome segregation;GO:0009933 meristem structural organization", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q67XT3-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q67XX3-1", "uniprot_id": [ { "id": "JMJ22_ARATH", "url": "https://www.uniprot.org/uniprot/Q67XX3", "type": "external" } ], "mass": 57419.0, "length": 502, "protein_name": "Arginine-specific demethylase JMJ22", "gene_name": "JMJ22", "organism": "Arabidopsis", "refseq_name": "transferring glycosyl group transferase", "refseq_ac": [ { "id": "NP_196273", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_196273", "type": "external" } ], "gene_names_uniprotkb": "JMJ22; F15M7.8", "gene_names_refseq": "F15M7.8; F15M7_8; JMJ22; Jumonji domain-containing protein 22", "protein_names_uniprotkb": "Arginine-specific demethylase JMJ22; 1.14.11.-; Arginine-specific histone demethylase JMJ22; AtJMJ22; F-box protein JMJ22; Jumonji domain-containing protein 22; Protein JUMONJI 22; [histone H4]-dimethyl-L-arginine(3) monodemethylase JMJ22", "protein_names_refseq": "transferring glycosyl group transferase", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G06550)", "pathway_count": 1, "publication_count": 3, "publication_id_list": "18713399;22483719;27862469", "class_list": "", "function": "Histone demethylase that demethylates 'Arg-3' (H4R3me) of histone H4 with a specific activity for H4R3me2 (PubMed:22483719). Involved in the positive regulation of gene expression (PubMed:22483719). Together with JMJ20, positively regulates seed germination by promoting the removal of repressive histone arginine methylations (e.g. H4R3me2) at GA3ox1 and GA3ox2 to trigger gibberellic acid (GA) biosynthesis (PubMed:22483719)., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9FG15", "ec_number_list": [ { "id": "1.14.11.-", "url": "https://www.rhea-db.org/rhea/?query=ec:1.14.11.-", "type": "external" } ], "go_molecular_function": "GO:0046872 metal ion binding;GO:0016491 oxidoreductase activity;GO:0000976 transcription cis-regulatory region binding;GO:0000987 cis-regulatory region sequence-specific DNA binding;GO:0032452 histone demethylase activity", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0040029 epigenetic regulation of gene expression;GO:0010114 response to red light;GO:0009740 gibberellic acid mediated signaling pathway;GO:0010030 positive regulation of seed germination;GO:0010099 regulation of photomorphogenesis", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "Q67XX3-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q67YC0-1", "uniprot_id": [ { "id": "PPSP1_ARATH", "url": "https://www.uniprot.org/uniprot/Q67YC0", "type": "external" } ], "mass": 33515.0, "length": 295, "protein_name": "Inorganic pyrophosphatase 1", "gene_name": "PS2", "organism": "Arabidopsis", "refseq_name": "inorganic pyrophosphatase 1", "refseq_ac": [ { "id": "NP_565052", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_565052", "type": "external" } ], "gene_names_uniprotkb": "PS2; F3N23.21", "gene_names_refseq": "ATPS2; AtPPsPase1; F3N23.21; F3N23_21; PPsPase1; PS2; phosphate starvation-induced gene 2; pyrophosphate-specific phosphatase1", "protein_names_uniprotkb": "Inorganic pyrophosphatase 1; 3.6.1.1; AtPPsPase1; AtPS2; PPi phosphatase 1; Protein PHOSPHATE STARVATION-INDUCED GENE 2; Pyrophosphate-specific phosphatase 1", "protein_names_refseq": "inorganic pyrophosphatase 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G73010)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "11130712;15894620;21122813;27862469", "class_list": "", "function": "Catalyzes the specific cleavage of pyrophosphate., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q8LDK9;Q9SSM6", "ec_number_list": [ { "id": "3.6.1.1", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.1.1", "type": "external" } ], "go_molecular_function": "GO:0016462 pyrophosphatase activity;GO:0046872 metal ion binding;GO:0004427 inorganic diphosphate phosphatase activity;GO:0016791 phosphatase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005783 endoplasmic reticulum", "go_biological_process": "GO:0051262 protein tetramerization;GO:0071456 cellular response to hypoxia;GO:0016036 cellular response to phosphate starvation", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "Q67YC0-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q67YG7-1", "uniprot_id": [ { "id": "SOFL1_ARATH", "url": "https://www.uniprot.org/uniprot/Q67YG7", "type": "external" } ], "mass": 16249.0, "length": 148, "protein_name": "Protein SOB FIVE-LIKE 1", "gene_name": "SOFL1", "organism": "Arabidopsis", "refseq_name": "SOB five-like 1", "refseq_ac": [ { "id": "NP_564241", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_564241", "type": "external" } ], "gene_names_uniprotkb": "SOFL1; F28B23.12", "gene_names_refseq": "ATSOFL1; F28B23.12; F28B23_12; SOB FIVE-LIKE 1; SOB five-like 1; SOFL1", "protein_names_uniprotkb": "Protein SOB FIVE-LIKE 1; AtSOFL1", "protein_names_refseq": "SOB five-like 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G26210)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "11130712;16709198;20011053;27862469;29467189", "class_list": "", "function": "Involved in cytokinin-mediated development (PubMed:20011053, PubMed:29467189). Together with SOFL2, triggers the endogenous content of specific bioactive cytokinins derived from the biosynthetic intermediates trans-zeatin riboside monophosphate (tZRMP) and N(6)-(Delta(2)-isopentenyl)adenosine monophosphate (iPRMP) such as N-glucosides trans-zeatin 7-glucoside (tZ7G), cis-zeatin 7-glucoside (cZ7G) and N(6)-(Delta(2)-isopentenyl)adenine 7-glucoside (iP7G) (PubMed:20011053)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 2, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q681A7;Q8LAZ9;Q9C665", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm", "go_biological_process": "GO:0009691 cytokinin biosynthetic process;GO:0009736 cytokinin-activated signaling pathway;GO:0009690 cytokinin metabolic process", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q67YG7-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q67YI9-1", "uniprot_id": [ { "id": "EPN2_ARATH", "url": "https://www.uniprot.org/uniprot/Q67YI9", "type": "external" } ], "mass": 95478.0, "length": 895, "protein_name": "Clathrin interactor EPSIN 2", "gene_name": "EPSIN2", "organism": "Arabidopsis", "refseq_name": "ENTH/VHS family protein", "refseq_ac": [ { "id": "NP_001031535", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001031535", "type": "external" } ], "gene_names_uniprotkb": "EPSIN2; EPSINR2; F14B2.10; F14B2.11", "gene_names_refseq": "F14B2.10", "protein_names_uniprotkb": "Clathrin interactor EPSIN 2; EPSIN-related 2", "protein_names_refseq": "ENTH/VHS family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G43160)", "pathway_count": 1, "publication_count": 28, "publication_id_list": "10617197;14593172;16231097;17277094;17317660;18463617;19245862;19376835;19688752;20466843;21768351;22438062;22631563;23111157;23572148;23660473;23776212;24043427;24601666;25561503;26091701;27532006;27862469;28011693;28154133;29167316;29654922;30833711", "class_list": "", "function": "May have a role in transport via clathrin-coated vesicles from the trans-Golgi network to endosomes. Stimulates clathrin assembly (By similarity). Binds to membranes enriched in phosphatidylinositol 3-phosphate (PtdIns(3)P). Plays an important role in protein trafficking., [UniProtKB, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 3, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 3, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 3, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 1, "reported_phosphosites": 17, "reported_mutagensis": 2, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 0, "biomarker_type": "", "glycan_count": 1, "disease_count": 0, "glyco_site_count": 3, "binding_glycan_count": 0, "secondary_ac_list": "Q570B8;Q67YS3;Q94A14;Q9ZW78;Q9ZW79", "ec_number_list": [], "go_molecular_function": "GO:0005543 phospholipid binding;GO:0030276 clathrin binding", "go_cellular_component": "GO:0030125 clathrin vesicle coat;GO:0005737 cytoplasm;GO:0005768 endosome;GO:0005794 Golgi apparatus;GO:0005829 cytosol", "go_biological_process": "GO:0006897 endocytosis;GO:0015031 protein transport", "synthesized_glycan_count": 0, "hit_score": 3.3, "record_id": "Q67YI9-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0100000001001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q67Z07-1", "uniprot_id": [ { "id": "PER2_ARATH", "url": "https://www.uniprot.org/uniprot/Q67Z07", "type": "external" } ], "mass": 35624.0, "length": 325, "protein_name": "Peroxidase 2", "gene_name": "PER2", "organism": "Arabidopsis", "refseq_name": "Peroxidase superfamily protein", "refseq_ac": [ { "id": "NP_563732", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_563732", "type": "external" } ], "gene_names_uniprotkb": "PER2; P2; YUP8H12.14", "gene_names_refseq": "YUP8H12.15", "protein_names_uniprotkb": "Peroxidase 2; 1.11.1.7; ATP12a; Atperox P2", "protein_names_refseq": "Peroxidase superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G05240); (ath:AT1G05250)", "pathway_count": 2, "publication_count": 3, "publication_id_list": "11130712;12034502;27862469", "class_list": "", "function": "Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress. These functions might be dependent on each isozyme/isoform in each plant tissue., [UniProtKB]", "predicted_glycosites": 1, "predicted_n_glycosites": 1, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "Q96506", "ec_number_list": [ { "id": "1.11.1.7", "url": "https://www.rhea-db.org/rhea/?query=ec:1.11.1.7", "type": "external" }, { "id": "3.1.3.2", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.2", "type": "external" } ], "go_molecular_function": "GO:0046872 metal ion binding;GO:0020037 heme binding;GO:0004601 peroxidase activity;GO:0140825 lactoperoxidase activity", "go_cellular_component": "GO:0005576 extracellular region;GO:0009505 plant-type cell wall", "go_biological_process": "GO:0006979 response to oxidative stress;GO:0006950 response to stress;GO:0042744 hydrogen peroxide catabolic process;GO:0009664 plant-type cell wall organization;GO:0009808 lignin metabolic process", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "Q67Z07-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000010000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q67Z52-1", "uniprot_id": [ { "id": "TBCB_ARATH", "url": "https://www.uniprot.org/uniprot/Q67Z52", "type": "external" } ], "mass": 27331.0, "length": 243, "protein_name": "Tubulin-folding cofactor B", "gene_name": "TFCB", "organism": "Arabidopsis", "refseq_name": "tubulin folding cofactor B", "refseq_ac": [ { "id": "NP_187633", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_187633", "type": "external" } ], "gene_names_uniprotkb": "TFCB; EMB2804; F14P13.18; TBCB", "gene_names_refseq": "EMB2804; EMBRYO DEFECTIVE 2804", "protein_names_uniprotkb": "Tubulin-folding cofactor B; AtTFCB; Protein EMBRYO DEFECTIVE 2804", "protein_names_refseq": "tubulin folding cofactor B", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G10220)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "11130713;11959844;16928693;20036919;27862469", "class_list": "", "function": "Involved in control of cell division. Regulates probably the availability of alpha-tubulin for dimerization of alpha-/beta-tubulin, which is required for proper microtubule biogenesis. Decreased expression of TFCB results in enlarged mesophyll cells and leaf epidermal cells with bulged nuclei, increased ploidy and increased numbers of spindles and phragmoplasts., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q67XW4;Q8L5R5;Q9SS34", "ec_number_list": [], "go_molecular_function": "GO:0051010 microtubule plus-end binding;GO:0043014 alpha-tubulin binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005829 cytosol;GO:0035371 microtubule plus-end;GO:0009507 chloroplast", "go_biological_process": "GO:0051301 cell division;GO:0007021 tubulin complex assembly;GO:0031122 cytoplasmic microtubule organization;GO:0007023 post-chaperonin tubulin folding pathway;GO:0009793 embryo development ending in seed dormancy", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q67Z52-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q67ZB6-1", "uniprot_id": [ { "id": "JMJ20_ARATH", "url": "https://www.uniprot.org/uniprot/Q67ZB6", "type": "external" } ], "mass": 54358.0, "length": 462, "protein_name": "Arginine-specific demethylase JMJ20", "gene_name": "JMJ20", "organism": "Arabidopsis", "refseq_name": "2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein", "refseq_ac": [ { "id": "NP_201113", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_201113", "type": "external" } ], "gene_names_uniprotkb": "JMJ20; MDC12.4", "gene_names_refseq": "JMJ20; Jumonji domain-containing protein 20; MDC12.4; MDC12_4", "protein_names_uniprotkb": "Arginine-specific demethylase JMJ20; 1.14.11.-; Arginine-specific histone demethylase JMJ20; AtJMJ20; Jumonji domain-containing protein 20; Protein JUMONJI 20; [histone H4]-dimethyl-L-arginine(3) monodemethylase JMJ20", "protein_names_refseq": "2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G63080)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "18713399;22483719;27862469;9501997", "class_list": "", "function": "Histone demethylase that demethylates 'Arg-3' (H4R3me) of histone H4 with a specific activity for H4R3me2 (PubMed:22483719). Involved in the positive regulation of gene expression (PubMed:22483719). Together with JMJ22, positively regulates seed germination by promoting the removal of repressive histone arginine methylations (e.g. H4R3me2) at GA3ox1 and GA3ox2 to trigger gibberellic acid (GA) biosynthesis (PubMed:22483719)., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q680P2;Q9FML5", "ec_number_list": [ { "id": "1.14.11.-", "url": "https://www.rhea-db.org/rhea/?query=ec:1.14.11.-", "type": "external" } ], "go_molecular_function": "GO:0033746 histone H3R2 demethylase activity;GO:0033749 histone H4R3 demethylase activity;GO:0046872 metal ion binding;GO:0000987 cis-regulatory region sequence-specific DNA binding;GO:0043565 sequence-specific DNA binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm", "go_biological_process": "GO:0040029 epigenetic regulation of gene expression;GO:0045905 positive regulation of translational termination;GO:0010114 response to red light;GO:0009740 gibberellic acid mediated signaling pathway;GO:0010030 positive regulation of seed germination", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "Q67ZB6-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q67ZE1-1", "uniprot_id": [ { "id": "HSDD2_ARATH", "url": "https://www.uniprot.org/uniprot/Q67ZE1", "type": "external" } ], "mass": 61704.0, "length": 564, "protein_name": "3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 2", "gene_name": "D2", "organism": "Arabidopsis", "refseq_name": "3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 2", "refseq_ac": [ { "id": "NP_001031422", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001031422", "type": "external" } ], "gene_names_uniprotkb": "D2; RTNLB19; T1D16.10", "gene_names_refseq": "3BETAHSD/D2; 3beta-hydroxysteroid- dehydrogenase/decarboxylase isoform 2; 3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 2; AT3BETAHSD/D2; AT3BETAHSD/D; T1D16.10; T1D16_10", "protein_names_uniprotkb": "3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 2; 1.1.1.418; 4alpha-carboxysterol-C3-dehydrogenase/C4-decarboxylase isoform 1-2; At3BETAHSD/D2; AtRTNLB19; Reticulon-like protein B19; Sterol-4-alpha-carboxylate 3-dehydrogenase 2, decarboxylating", "protein_names_refseq": "3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 2", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G26260)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "10617197;14993207;16835224;17604024;22673766;27862469", "class_list": "", "function": "3beta-hydroxysteroid-dehydrogenase/decarboxylase involved in sterol synthesis (PubMed:16835224). Catalyzes the formation of 3-oxosteroids from 3beta-hydroxysteroids-4alpha-carboxylate (PubMed:16835224). Involved in the regulation of inflorescence internodes and leaves growth, probably by affecting auxin transporter activity possibly by altering sterol composition in the membranes (PubMed:22673766)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 3, "predicted_n_glycosites": 3, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 3, "binding_glycan_count": 0, "secondary_ac_list": "O64845", "ec_number_list": [ { "id": "1.1.1.170", "url": "https://www.rhea-db.org/rhea/?query=ec:1.1.1.170", "type": "external" }, { "id": "1.1.1.418", "url": "https://www.rhea-db.org/rhea/?query=ec:1.1.1.418", "type": "external" } ], "go_molecular_function": "GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor;GO:0102175 3-beta-hydroxysteroid dehydrogenase (NAD+)/C4-decarboxylase activity", "go_cellular_component": "GO:0005783 endoplasmic reticulum;GO:0016020 membrane;GO:0005789 endoplasmic reticulum membrane", "go_biological_process": "GO:0016126 sterol biosynthetic process;GO:0060918 auxin transport;GO:0099402 plant organ development", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q67ZE1-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000010000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q67ZM7-1", "uniprot_id": [ { "id": "FOLK_ARATH", "url": "https://www.uniprot.org/uniprot/Q67ZM7", "type": "external" } ], "mass": 33218.0, "length": 307, "protein_name": "Farnesol kinase, chloroplastic", "gene_name": "FOLK", "organism": "Arabidopsis", "refseq_name": "Phosphatidate cytidylyltransferase family protein", "refseq_ac": [ { "id": "NP_200664", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_200664", "type": "external" } ], "gene_names_uniprotkb": "FOLK; MZN1.8", "gene_names_refseq": "FOLK; MZN1.8; MZN1_8; farnesol kinase", "protein_names_uniprotkb": "Farnesol kinase, chloroplastic; 2.7.1.216", "protein_names_refseq": "Phosphatidate cytidylyltransferase family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G58560)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "10718197;16361393;21395888;27862469", "class_list": "", "function": "Kinase involved in negative regulation of abscisic acid (ABA) signaling. Substrate preference is farnesol > geraniol > geranylgeraniol, but has no activity with farnesyl phosphate. Can use CTP > ATP > GTP = UTP as phosphoryl donor., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q67ZA1;Q8LAW9;Q9LV00", "ec_number_list": [ { "id": "2.7.1.216", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.216", "type": "external" } ], "go_molecular_function": "GO:0016301 kinase activity;GO:0052673 prenol kinase activity", "go_cellular_component": "GO:0009507 chloroplast;GO:0031969 chloroplast membrane", "go_biological_process": "GO:0006720 isoprenoid metabolic process;GO:0009737 response to abscisic acid;GO:0048440 carpel development;GO:0016487 farnesol metabolic process", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "Q67ZM7-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q680I0-1", "uniprot_id": [ { "id": "ORTH5_ARATH", "url": "https://www.uniprot.org/uniprot/Q680I0", "type": "external" } ], "mass": 68719.0, "length": 623, "protein_name": "E3 ubiquitin-protein ligase ORTHRUS 5", "gene_name": "ORTH5", "organism": "Arabidopsis", "refseq_name": "Zinc finger (C3HC4-type RING finger) family protein", "refseq_ac": [ { "id": "NP_176779", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_176779", "type": "external" } ], "gene_names_uniprotkb": "ORTH5; F15E12.5; VIM2", "gene_names_refseq": "F15E12.5; F15E12_5; ORTH5; ORTHRUS 5; VARIANT IN METHYLATION 2; VIM2", "protein_names_uniprotkb": "E3 ubiquitin-protein ligase ORTHRUS 5; 2.3.2.27; Protein VARIANT IN METHYLATION 2; RING-type E3 ubiquitin transferase ORTHRUS 5", "protein_names_refseq": "Zinc finger (C3HC4-type RING finger) family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G66050)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "11130712;11983057;14593172;18643997;18704160;27862469", "class_list": "", "function": "E3 ubiquitin-protein ligase. Participates in CpG methylation-dependent transcriptional regulation and epigenetic transcriptional silencing. Mediates ubiquitination with the E2 ubiquitin-conjugating enzyme UBC11., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q6NQ90;Q9C8E0", "ec_number_list": [], "go_molecular_function": "GO:0008270 zinc ion binding;GO:0061630 ubiquitin protein ligase activity;GO:0008327 methyl-CpG binding;GO:0042393 histone binding;GO:0004842 ubiquitin-protein transferase activity", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0016567 protein ubiquitination;GO:0044027 negative regulation of gene expression via chromosomal CpG island methylation", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q680I0-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q680I5-1", "uniprot_id": [ { "id": "GAGT2_ARATH", "url": "https://www.uniprot.org/uniprot/Q680I5", "type": "external" } ], "mass": 61600.0, "length": 578, "protein_name": "Glutathione hydrolase 2", "gene_name": "GGT2", "organism": "Arabidopsis", "refseq_name": "gamma-glutamyl transpeptidase 2", "refseq_ac": [ { "id": "NP_195675", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_195675", "type": "external" } ], "gene_names_uniprotkb": "GGT2; T19P19.40", "gene_names_refseq": "GGT2; T19P19.40; T19P19_40; gamma-glutamyl transpeptidase 2", "protein_names_uniprotkb": "Glutathione hydrolase 2; 2.3.2.2; 3.4.19.13; Gamma-glutamyltransferase 2; Gamma-glutamyltranspeptidase 2", "protein_names_refseq": "gamma-glutamyl transpeptidase 2", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G39650)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "10617198;17316175;17545509;20959624;27862469", "class_list": "", "function": "May be required for glutathione transport into developing seeds., [UniProtKB]", "predicted_glycosites": 4, "predicted_n_glycosites": 4, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 4, "binding_glycan_count": 0, "secondary_ac_list": "O65653", "ec_number_list": [ { "id": "2.3.2.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.2.2", "type": "external" }, { "id": "3.4.19.13", "url": "https://www.rhea-db.org/rhea/?query=ec:3.4.19.13", "type": "external" } ], "go_molecular_function": "GO:0036374 glutathione hydrolase activity;GO:0103068 leukotriene C4 gamma-glutamyl transferase activity;GO:0016756 glutathione gamma-glutamylcysteinyltransferase activity", "go_cellular_component": "GO:0005576 extracellular region;GO:0005886 plasma membrane;GO:0048046 apoplast", "go_biological_process": "GO:0006751 glutathione catabolic process;GO:0034775 glutathione transmembrane transport", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q680I5-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000010000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q680Q4-1", "uniprot_id": [ { "id": "SIZ1_ARATH", "url": "https://www.uniprot.org/uniprot/Q680Q4", "type": "external" } ], "mass": 97034.0, "length": 884, "protein_name": "E3 SUMO-protein ligase SIZ1", "gene_name": "SIZ1", "organism": "Arabidopsis", "refseq_name": "DNA-binding protein with MIZ/SP-RING zinc finger, PHD-finger and SAP domain-containing protein", "refseq_ac": [ { "id": "NP_001032108", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001032108", "type": "external" } ], "gene_names_uniprotkb": "SIZ1; MUF9.5; MUF9.70", "gene_names_refseq": "AT5G60420; ATSIZ1; MUF9.5; MUF9_5; SIZ1", "protein_names_uniprotkb": "E3 SUMO-protein ligase SIZ1; 2.3.2.-; E3 SUMO-protein transferase SIZ1", "protein_names_refseq": "DNA-binding protein with MIZ/SP-RING zinc finger, PHD-finger and SAP domain-containing protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G60410)", "pathway_count": 1, "publication_count": 19, "publication_id_list": "14593172;15894620;17041025;17163880;17416732;17644626;17905899;18069938;18502747;19276109;19423640;20466843;23572148;25561503;26662259;27862469;28011693;30833711;9679202", "class_list": "", "function": "E3 SUMO protein ligase involved in regulation processes. Mediates SUMO/ attachment to PHR1, a MYB transcriptional activator controlling the phosphate deficiency responses (PubMed:15894620). Functions as an upstream negative regulator of salicylic acid (SA) accumulation and subsequent SA-mediated systemic acquired resistance (SAR) signaling. Probably not involved in jasmonic acid (JA)-mediated defense response. Participates in abiotic stress-induced sumoylation. Controls heat shock-induced SUMO1 and SUMO2 conjugation and facilitates basal thermotolerance. Involved in freezing tolerance by mediating sumoylation of ICE1, a transcription activator of the cold signaling regulator CBF3/DREB1A. Acts as a positive regulator of drought stress tolerance. Acts as a floral repressor that promotes FLC expression by repressing FLD activity through sumoylation. Acts as a negative regulator of abscisic acid (ABA) signaling through ABI5 sumoylation. Mediates sumoylation of SCE1, GTE3 and GTE5. Functions as a negative regulator of SnRK1 signaling through sumoylation of several components of the SnRK1 complex (PubMed:26662259)., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 7, "reported_mutagensis": 3, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "B9DG12;Q56YS2;Q56ZS1;Q67ZL3;Q9FKK4", "ec_number_list": [], "go_molecular_function": "GO:0061665 SUMO ligase activity;GO:0008270 zinc ion binding;GO:0019789 SUMO transferase activity;GO:0032183 SUMO binding", "go_cellular_component": "GO:0005634 nucleus;GO:0016607 nuclear speck;GO:0000785 chromatin", "go_biological_process": "GO:0006952 defense response;GO:0016925 protein sumoylation;GO:0040008 regulation of growth;GO:0051301 cell division;GO:0009414 response to water deprivation", "synthesized_glycan_count": 0, "hit_score": 2.0, "record_id": "Q680Q4-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q681Q7-1", "uniprot_id": [ { "id": "Y1390_ARATH", "url": "https://www.uniprot.org/uniprot/Q681Q7", "type": "external" } ], "mass": 29795.0, "length": 272, "protein_name": "Uncharacterized protein At1g03900", "gene_name": "F21M11.17", "organism": "Arabidopsis", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "F21M11.17", "gene_names_refseq": "", "protein_names_uniprotkb": "Uncharacterized protein At1g03900", "protein_names_refseq": "", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G03900)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "11130712;14593172;22631563;25561503;27862469", "class_list": "", "function": "", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q67YX5;Q94B37;Q9ZWB0", "ec_number_list": [], "go_molecular_function": "GO:0042626 ATPase-coupled transmembrane transporter activity", "go_cellular_component": "GO:0030125 clathrin vesicle coat;GO:0005737 cytoplasm", "go_biological_process": "GO:0006897 endocytosis;GO:0016192 vesicle-mediated transport", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q681Q7-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q682U6-1", "uniprot_id": [ { "id": "DPD1_ARATH", "url": "https://www.uniprot.org/uniprot/Q682U6", "type": "external" } ], "mass": 35248.0, "length": 316, "protein_name": "Exonuclease DPD1, chloroplastic/mitochondrial", "gene_name": "DPD1", "organism": "Arabidopsis", "refseq_name": "Polynucleotidyl transferase, ribonuclease H-like superfamily protein", "refseq_ac": [ { "id": "NP_198046", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_198046", "type": "external" } ], "gene_names_uniprotkb": "DPD1; F2P16.200", "gene_names_refseq": "DPD1; F2P16.200; F2P16_200; defective in pollen organelle DNA degradation1", "protein_names_uniprotkb": "Exonuclease DPD1, chloroplastic/mitochondrial; 3.1.11.-; Mg2+-dependent DNA exonuclease; Protein DEFECTIVE IN POLLEN DNA DEGRADATION 1", "protein_names_refseq": "Polynucleotidyl transferase, ribonuclease H-like superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G26940)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "11130714;21521697;21852754;22239102;23572148;27862469", "class_list": "", "function": "Exonuclease required for organelle DNA degradation during pollen development. Plays non-essential roles in maternal inheritance. May be part of the DNA salvage machinery., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 8, "reported_mutagensis": 3, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q681U1;Q8LBK8", "ec_number_list": [], "go_molecular_function": "GO:0008296 3'-5'-DNA exonuclease activity;GO:0046872 metal ion binding;GO:0003676 nucleic acid binding;GO:0004527 exonuclease activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005739 mitochondrion;GO:0009507 chloroplast;GO:0009536 plastid", "go_biological_process": "GO:0006308 DNA catabolic process", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q682U6-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q68KI4-1", "uniprot_id": [ { "id": "NHX1_ARATH", "url": "https://www.uniprot.org/uniprot/Q68KI4", "type": "external" } ], "mass": 59513.0, "length": 538, "protein_name": "Sodium/hydrogen exchanger 1", "gene_name": "NHX1", "organism": "Arabidopsis", "refseq_name": "Na+/H+ exchanger 1", "refseq_ac": [ { "id": "NP_198067", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_198067", "type": "external" } ], "gene_names_uniprotkb": "NHX1; T21B4.60", "gene_names_refseq": "AT-NHX1; ATNHX1; ATNHX; NA(+)/H(+) ANTIPORTER; NHX1; Na+/H+ exchanger 1; T21B4.60; T21B4_60", "protein_names_uniprotkb": "Sodium/hydrogen exchanger 1; NHE-1; Na(+)/H(+) exchanger 1", "protein_names_refseq": "Na+/H+ exchanger 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G27150)", "pathway_count": 1, "publication_count": 35, "publication_id_list": "10455050;10767428;10998367;11130714;11606781;11707435;12047628;12369629;14530406;14535887;16179357;16249341;18463617;18686298;19376835;19688752;20374526;20466843;22060019;23111157;23328941;23572148;23660473;23776212;23820729;24043427;25561503;26091701;26187819;27419465;27532006;27862469;29167316;30833711;9990049", "class_list": "", "function": "Acts in low affinity electroneutral exchange of protons for cations such as Na(+) or K(+) across membranes. Can also exchange Li(+) and Cs(+) with a lower affinity. Involved in vacuolar ion compartmentalization necessary for cell volume regulation and cytoplasmic Na(+) detoxification. Required during leaves expansion, probably to stimulate epidermal cell expansion. Confers competence to grow in high salinity conditions., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 3, "predicted_n_glycosites": 3, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 4, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 3, "binding_glycan_count": 0, "secondary_ac_list": "O04655;Q8LRL1;Q9ZPK3", "ec_number_list": [], "go_molecular_function": "GO:0015385 sodium:proton antiporter activity;GO:0015386 potassium:proton antiporter activity;GO:0005516 calmodulin binding", "go_cellular_component": "GO:0000139 Golgi membrane;GO:0005576 extracellular region;GO:0005886 plasma membrane;GO:0005789 endoplasmic reticulum membrane;GO:0005774 vacuolar membrane", "go_biological_process": "GO:0009651 response to salt stress;GO:0006814 sodium ion transport;GO:0055075 potassium ion homeostasis;GO:0051453 regulation of intracellular pH;GO:0071805 potassium ion transmembrane transport", "synthesized_glycan_count": 0, "hit_score": 3.6, "record_id": "Q68KI4-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000010001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q6AWU6-1", "uniprot_id": [ { "id": "HOL3_ARATH", "url": "https://www.uniprot.org/uniprot/Q6AWU6", "type": "external" } ], "mass": 25043.0, "length": 226, "protein_name": "Probable thiol methyltransferase 2", "gene_name": "HOL3", "organism": "Arabidopsis", "refseq_name": "S-adenosyl-L-methionine-dependent methyltransferases superfamily protein", "refseq_ac": [ { "id": "NP_850403", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_850403", "type": "external" } ], "gene_names_uniprotkb": "HOL3; F6E13.7", "gene_names_refseq": "ATHOL3; F6E13.7; HARMLESS TO OZONE LAYER 3; HOL3", "protein_names_uniprotkb": "Probable thiol methyltransferase 2; 2.1.1.9; AtHOL3; Protein HARMLESS TO OZONE LAYER 3", "protein_names_refseq": "S-adenosyl-L-methionine-dependent methyltransferases superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G43940)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "10617197;19419967;22440515;23111157;23572148;23776212;27862469;30833711", "class_list": "", "function": "S-adenosyl-L-methionine-dependent methyltransferase., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 3, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O80564", "ec_number_list": [ { "id": "2.1.1.9", "url": "https://www.rhea-db.org/rhea/?query=ec:2.1.1.9", "type": "external" } ], "go_molecular_function": "GO:0018708 thiol S-methyltransferase activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005777 peroxisome;GO:0005829 cytosol;GO:0009941 chloroplast envelope", "go_biological_process": "GO:0032259 methylation", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "Q6AWU6-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q6BDA0-1", "uniprot_id": [ { "id": "ELF6_ARATH", "url": "https://www.uniprot.org/uniprot/Q6BDA0", "type": "external" } ], "mass": 150072.0, "length": 1340, "protein_name": "Lysine-specific demethylase ELF6", "gene_name": "ELF6", "organism": "Arabidopsis", "refseq_name": "Zinc finger (C2H2 type) family protein / transcription factor jumonji (jmj) family protein", "refseq_ac": [ { "id": "NP_196044", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_196044", "type": "external" } ], "gene_names_uniprotkb": "ELF6; F21E1.160; JMJ11; PKDM9B", "gene_names_refseq": "EARLY FLOWERING 6; ELF6; F21E1.160; F21E1_160", "protein_names_uniprotkb": "Lysine-specific demethylase ELF6; 1.14.11.-; AtJMJ11; Early flowering 6; Jumonji domain-containing protein 11; Lysine-specific histone demethylase ELF6; Protein JUMONJI 11; [histone H3]-trimethyl-L-lysine(27) monodemethylase JMJ11", "protein_names_refseq": "Zinc finger (C2H2 type) family protein / transcription factor jumonji (jmj) family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G04240)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "11130714;15377760;18467490;18713399;18950507;19946624;25219852;27862469;33107825", "class_list": "", "function": "Histone demethylase that demethylates 'Lys-27' (H3K27me) of histone H3, thus acting as a positive regulator of gene expression (PubMed:33107825). Demethylates tri-methylated (H3K27me3) and di-methylated (H3K27me2) H3K27me (PubMed:33107825). Inactive on H3K27me1, H3K4me3, H3K9me2 and H3K36me3 (PubMed:33107825). Acts as a repressor of the photoperiodic flowering pathway and of FT (PubMed:33107825). May also be active on H3K4me. Binds around the transcription start site of the FT locus. Required for epigenetic reprogramming by resetting the expression of the floral repressor FLC locus, thus aluviating cold-mediated FLC epigenetically silencing occurring during vernalization and preventing inapropriate epigenetic states inheritence (PubMed:25219852, PubMed:33107825)., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed]; Together with REF6, required for H3K27me3 resetting (especially in constitutive heterochromatin within the pericentromeric regions) and transgenerational inheritance of histone marks, thus acting in safeguarding genome and epigenome integrity during sexual reproduction., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q56WH6;Q9FYD7", "ec_number_list": [ { "id": "1.14.11.-", "url": "https://www.rhea-db.org/rhea/?query=ec:1.14.11.-", "type": "external" }, { "id": "1.14.11.68", "url": "https://www.rhea-db.org/rhea/?query=ec:1.14.11.68", "type": "external" } ], "go_molecular_function": "GO:0034647 histone H3K4me/H3K4me2/H3K4me3 demethylase activity;GO:0008270 zinc ion binding;GO:0071558 histone H3K27me2/H3K27me3 demethylase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0000785 chromatin", "go_biological_process": "GO:0006338 chromatin remodeling;GO:0006351 DNA-templated transcription;GO:0010628 positive regulation of gene expression;GO:0006355 regulation of DNA-templated transcription;GO:0010468 regulation of gene expression", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "Q6BDA0-1", "record_type": "protein", "filter_code": "0000000.0100101.010000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q6DBA5-1", "uniprot_id": [ { "id": "NRPD4_ARATH", "url": "https://www.uniprot.org/uniprot/Q6DBA5", "type": "external" } ], "mass": 22414.0, "length": 205, "protein_name": "DNA-directed RNA polymerases IV and V subunit 4", "gene_name": "NRPD4", "organism": "Arabidopsis", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "NRPD4; NRPE4; RDM2; dl4012w", "gene_names_refseq": "", "protein_names_uniprotkb": "DNA-directed RNA polymerases IV and V subunit 4; Protein RNA-DIRECTED DNA METHYLATION 2; RNA polymerase II, Rpb4, core protein", "protein_names_refseq": "", "tax_id": 3702, "disease": "", "pathway": "", "pathway_count": 0, "publication_count": 6, "publication_id_list": "10617198;19110459;19204117;21811420;27862469;9461215", "class_list": "", "function": "DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Component of RNA polymerases IV and V which mediate short-interfering RNAs (siRNA) accumulation and subsequent RNA-directed DNA methylation-dependent (RdDM) transcriptional gene silencing (TGS) of endogenous repeated sequences, including transposable elements. Required for the de novo DNA methylation directed by the RdDM pathway., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "F4JKY1;Q9SUL2", "ec_number_list": [], "go_molecular_function": "GO:0000166 nucleotide binding", "go_cellular_component": "GO:0005634 nucleus;GO:0000418 RNA polymerase IV complex;GO:0000419 RNA polymerase V complex", "go_biological_process": "GO:0006352 DNA-templated transcription initiation", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q6DBA5-1", "record_type": "protein", "filter_code": "0000000.0000100.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q6DBD7-1", "uniprot_id": [ { "id": "TOD1_ARATH", "url": "https://www.uniprot.org/uniprot/Q6DBD7", "type": "external" } ], "mass": 53882.0, "length": 462, "protein_name": "Alkaline ceramidase TOD1", "gene_name": "TOD1", "organism": "Arabidopsis", "refseq_name": "transmembrane protein (DUF616)", "refseq_ac": [ { "id": "NP_199434", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_199434", "type": "external" } ], "gene_names_uniprotkb": "TOD1; MDE13.4", "gene_names_refseq": "MDE13.4; MDE13_4", "protein_names_uniprotkb": "Alkaline ceramidase TOD1; 3.5.1.23; Protein TURGOR REGULATION DEFECT 1", "protein_names_refseq": "transmembrane protein (DUF616)", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G46220)", "pathway_count": 1, "publication_count": 3, "publication_id_list": "25591940;27862469;9679202", "class_list": "", "function": "Endoplasmic reticulum ceramidase that catalyzes the hydrolysis of ceramides into sphingosine and free fatty acids at alkaline pH (e.g. pH 9.5) (PubMed:25591940). Inactive on phytoceramide (PubMed:25591940). Involved in the regulation of turgor pressure in guard cells and pollen tubes (PubMed:25591940)., [UniProtKB, PubMed]", "predicted_glycosites": 3, "predicted_n_glycosites": 3, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 3, "binding_glycan_count": 0, "secondary_ac_list": "Q9FL38", "ec_number_list": [ { "id": "3.5.1.23", "url": "https://www.rhea-db.org/rhea/?query=ec:3.5.1.23", "type": "external" } ], "go_molecular_function": "GO:0017040 N-acylsphingosine amidohydrolase activity;GO:0016740 transferase activity", "go_cellular_component": "GO:0000139 Golgi membrane;GO:0005794 Golgi apparatus;GO:0009507 chloroplast;GO:0090406 pollen tube", "go_biological_process": "GO:0006629 lipid metabolic process;GO:0009992 intracellular water homeostasis;GO:0009737 response to abscisic acid;GO:0009738 abscisic acid-activated signaling pathway;GO:0009860 pollen tube growth", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "Q6DBD7-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000010000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q6DBG8-1", "uniprot_id": [ { "id": "ARAD1_ARATH", "url": "https://www.uniprot.org/uniprot/Q6DBG8", "type": "external" } ], "mass": 50782.0, "length": 447, "protein_name": "Probable arabinosyltransferase ARAD1", "gene_name": "ARAD1", "organism": "Arabidopsis", "refseq_name": "Exostosin family protein", "refseq_ac": [ { "id": "NP_850241", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_850241", "type": "external" } ], "gene_names_uniprotkb": "ARAD1; T4C15", "gene_names_refseq": "ARABINAN DEFICIENT 1; ARABINOSYLTRANSFERASE; ARAD1; T4C15.23; T4C15_23", "protein_names_uniprotkb": "Probable arabinosyltransferase ARAD1; 2.4.2.-; Arabinan alpha-1,5-arabinosyltransferase; L-Arabinosyltransferase; Protein ARABINAN DEFICIENT 1", "protein_names_refseq": "Exostosin family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G35100)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "10617197;16377743;22270560;23695504;27862469", "class_list": "glycogene;glycosyltransferase", "function": "Probable arabinosyl transferase responsible for the polymerization of arabinose into the arabinan of arabinogalactan. May function as inverting enzyme using UDP-beta-L-arabinopyranoside. May be important for arabinan side chains of rhamnogalacturonan I (RG-I), a major component of pectins. Cell wall pectic arabinans are involved in thigmomorphogenesis response of inflorescence stems to mechanical stress., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 3, "predicted_n_glycosites": 3, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 3, "binding_glycan_count": 0, "secondary_ac_list": "O82181", "ec_number_list": [], "go_molecular_function": "GO:0016757 glycosyltransferase activity", "go_cellular_component": "GO:0000139 Golgi membrane;GO:0005768 endosome;GO:0005794 Golgi apparatus;GO:0005802 trans-Golgi network;GO:0000138 Golgi trans cisterna", "go_biological_process": "GO:0009101 glycoprotein biosynthetic process;GO:0071555 cell wall organization;GO:0045489 pectin biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q6DBG8-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000010001.001.11000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q6DBQ1-1", "uniprot_id": [ { "id": "AHL25_ARATH", "url": "https://www.uniprot.org/uniprot/Q6DBQ1", "type": "external" } ], "mass": 30148.0, "length": 299, "protein_name": "AT-hook motif nuclear-localized protein 25", "gene_name": "AHL25", "organism": "Arabidopsis", "refseq_name": "AT-hook protein of GA feedback 1", "refseq_ac": [ { "id": "NP_195265", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_195265", "type": "external" } ], "gene_names_uniprotkb": "AHL25; AGF1; F23E12.50; HRC", "gene_names_refseq": "AGF1; AHL25; AT-hook motif nuclear localized protein 25; AT-hook protein of GA feedback 1; F23E12.50; F23E12_50", "protein_names_uniprotkb": "AT-hook motif nuclear-localized protein 25; AT-hook protein of GA feedback 1", "protein_names_refseq": "AT-hook protein of GA feedback 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G35390)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "10617198;15604740;17277098;22060019;23328941;24218605;27862469", "class_list": "", "function": "Transcription factor that specifically binds AT-rich DNA sequences related to the nuclear matrix attachment regions (MARs) (By similarity). Binds the DNA sequence GNFEI (GA-negative feedback element I) in the GA3OX1 promoter. Binding to GNFEI sequence is required for GA-negative feedback regulation of GA3OX1., [UniProtKB, PubMed, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 8, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O65489", "ec_number_list": [], "go_molecular_function": "GO:0003680 minor groove of adenine-thymine-rich DNA binding;GO:0003700 DNA-binding transcription factor activity", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0009938 negative regulation of gibberellic acid mediated signaling pathway;GO:0010228 vegetative to reproductive phase transition of meristem", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q6DBQ1-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q6EJ98-1", "uniprot_id": [ { "id": "BT5_ARATH", "url": "https://www.uniprot.org/uniprot/Q6EJ98", "type": "external" } ], "mass": 42314.0, "length": 368, "protein_name": "BTB/POZ and TAZ domain-containing protein 5", "gene_name": "BT5", "organism": "Arabidopsis", "refseq_name": "BTB and TAZ domain protein 5", "refseq_ac": [ { "id": "NP_568031", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_568031", "type": "external" } ], "gene_names_uniprotkb": "BT5; F19F18.100", "gene_names_refseq": "BT5; BTB and TAZ domain protein 5; F19F18.100; F19F18_100", "protein_names_uniprotkb": "BTB/POZ and TAZ domain-containing protein 5; BTB and TAZ domain protein 5", "protein_names_refseq": "BTB and TAZ domain protein 5", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G37610)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "10617198;11910074;15316289;15749712;15772280;19054356;27862469", "class_list": "", "function": "May act as a substrate-specific adapter of an E3 ubiquitin-protein ligase complex (CUL3-RBX1-BTB) which mediates the ubiquitination and subsequent proteasomal degradation of target proteins., [UniProtKB]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "Q8GW52;Q8LFA7;Q9SZF4", "ec_number_list": [], "go_molecular_function": "GO:0005516 calmodulin binding;GO:0008270 zinc ion binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm", "go_biological_process": "GO:0009409 response to cold;GO:0006355 regulation of DNA-templated transcription;GO:0042542 response to hydrogen peroxide;GO:0016567 protein ubiquitination;GO:0009751 response to salicylic acid", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q6EJ98-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q6F6B5-1", "uniprot_id": [ { "id": "ARC3_ARATH", "url": "https://www.uniprot.org/uniprot/Q6F6B5", "type": "external" } ], "mass": 82583.0, "length": 741, "protein_name": "Protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 3, chloroplastic", "gene_name": "ARC3", "organism": "Arabidopsis", "refseq_name": "GTP binding protein", "refseq_ac": [ { "id": "NP_177638", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_177638", "type": "external" } ], "gene_names_uniprotkb": "ARC3; F25A4.3; F9E10.14", "gene_names_refseq": "ACCUMULATION AND REPLICATION OF CHLOROPLASTS 3; ARC3; F25A4.3; F25A4_3", "protein_names_uniprotkb": "Protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 3, chloroplastic", "protein_names_refseq": "GTP binding protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G75010)", "pathway_count": 1, "publication_count": 17, "publication_id_list": "10417716;11130712;15356321;17304239;17451550;18284374;18764889;19453460;19564892;23936263;25731613;26527658;27862469;29138260;29967285;30252596;30824505", "class_list": "", "function": "Together with MIND1 and MCD1, regulates FtsZ ring positioning in chloroplasts in an ARC6-dependent manner (PubMed:29967285). Z-ring accessory protein involved in the initiation of plastid division and division site placement (might functionally replace bacterial MinC) (PubMed:23936263). Acts as a disassembly factor that accelerates fragmentation and depolymerization of existing FtsZ2 filaments by enhancing FTSZ2 GTPase activity, thus leading to the conversion of FTSZ2 bound GTP into GDP, a process which triggers FtsZ2 filaments destabilization (PubMed:25731613, PubMed:29138260). Prevents misplaced Z-ring formation at chloroplast stroma nondivision sites (PubMed:30824505). May control the rate of chloroplast expansion. Seems to influence stromule (stroma-filled tubular extensions of the plastid envelope membrane) length and frequency., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 6, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q0WT28;Q9C9P7;Q9SSG9", "ec_number_list": [], "go_molecular_function": "GO:0005525 GTP binding", "go_cellular_component": "GO:0005829 cytosol;GO:0098562 cytoplasmic side of membrane;GO:0009507 chloroplast;GO:0009570 chloroplast stroma;GO:0009707 chloroplast outer membrane", "go_biological_process": "GO:0009657 plastid organization;GO:0010020 chloroplast fission", "synthesized_glycan_count": 0, "hit_score": 1.8, "record_id": "Q6F6B5-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q6IMT0-1", "uniprot_id": [ { "id": "KIP_ARATH", "url": "https://www.uniprot.org/uniprot/Q6IMT0", "type": "external" } ], "mass": 290411.0, "length": 2587, "protein_name": "Protein KINKY POLLEN", "gene_name": "KIP", "organism": "Arabidopsis", "refseq_name": "SABRE-like protein", "refseq_ac": [ { "id": "NP_001078738", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001078738", "type": "external" } ], "gene_names_uniprotkb": "KIP; K2I5.3; K2I5.4", "gene_names_refseq": "", "protein_names_uniprotkb": "Protein KINKY POLLEN", "protein_names_refseq": "SABRE-like protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G49680)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "14675453;22631563;23111157;25561503;26187819;27862469", "class_list": "", "function": "May be involved in membrane trafficking (By similarity). Required for tip growth in pollen tubes and root hairs., [UniProtKB, PubMed, UniProtKB]", "predicted_glycosites": 17, "predicted_n_glycosites": 16, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 8, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 17, "binding_glycan_count": 0, "secondary_ac_list": "Q9LTA4;Q9LTA5", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005576 extracellular region;GO:0005794 Golgi apparatus;GO:0090404 pollen tube tip;GO:0035619 root hair tip", "go_biological_process": "GO:0009860 pollen tube growth;GO:0048768 root hair cell tip growth", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q6IMT0-1", "record_type": "protein", "filter_code": "0000000.0000101.010000.100000000000000000.0000000011001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q6IWA9-1", "uniprot_id": [ { "id": "CLE45_ARATH", "url": "https://www.uniprot.org/uniprot/Q6IWA9", "type": "external" } ], "mass": 14475.0, "length": 124, "protein_name": "CLAVATA3/ESR (CLE)-related protein 45", "gene_name": "CLE45", "organism": "Arabidopsis", "refseq_name": "CLAVATA3/ESR-RELATED 45", "refseq_ac": [ { "id": "NP_001077799", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001077799", "type": "external" } ], "gene_names_uniprotkb": "CLE45; F24J1", "gene_names_refseq": "CLAVATA3/ESR-RELATED 45; CLE45", "protein_names_uniprotkb": "CLAVATA3/ESR (CLE)-related protein 45", "protein_names_refseq": "CLAVATA3/ESR-RELATED 45", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G69588)", "pathway_count": 1, "publication_count": 15, "publication_id_list": "11130712;16489133;16902140;17147637;17229318;18034320;18078779;20016993;23569225;23910659;25049386;27354416;27862469;28607033;34651321", "class_list": "", "function": "Extracellular signal peptide that regulates cell fate (PubMed:16902140). Promotes the interactions between BAMs and CIKs proteins and triggers the phosphorylation of CIKs in a CLV1- BAM1- and BAM3-dependent manner (PubMed:34651321). Represses root apical meristem maintenance (PubMed:16902140, PubMed:23569225). Represses protophloem differentiation in a BAM3-dependent manner (PubMed:23569225). BRX, BAM3, and CLE45 act together to regulate the transition of protophloem cells from proliferation to differentiation, thus impinging on postembryonic growth capacity of the root meristem; this signaling pathway requires CRN and CLV2 and involves MAKR5 for its transduction/amplification (PubMed:23569225, PubMed:27354416, PubMed:28607033). Collaboratively with CLE25 and CLE26, prevents protophloem differentiation and triggers the consumption of the proximal root meristem in a BAMs- and CIKs-dependent manner (PubMed:34651321). Triggers the accumulation of MAKR5 in developing sieve elements in a BAM3-dependent manner (PubMed:27354416). Prevents, in a dose-dependent manner, auxin response in the root meristem thus leading in the repression of protophloem differentiation and periclinal sieve element precursor cell division (PubMed:25049386). Promotes pollen tube growth prolongation in a SKM1 and SKM2-dependent manner, especially under relatively high temperature (at 30 degrees Celsius), thus conferring tolerance against high temperature probably through the maintenance of mitochondrial activity (PubMed:23910659). Alleviates mitochondrial decay pollen tube in vitro culture (PubMed:23910659)., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 2, "predicted_n_glycosites": 2, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 2, "binding_glycan_count": 0, "secondary_ac_list": "A0MDK4", "ec_number_list": [], "go_molecular_function": "GO:0033612 receptor serine/threonine kinase binding", "go_cellular_component": "GO:0048046 apoplast", "go_biological_process": "GO:0009266 response to temperature stimulus;GO:0045595 regulation of cell differentiation;GO:0045168 cell-cell signaling involved in cell fate commitment;GO:0009734 auxin-activated signaling pathway;GO:0010078 maintenance of root meristem identity", "synthesized_glycan_count": 0, "hit_score": 1.6, "record_id": "Q6IWA9-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000010000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q6J9Q2-1", "uniprot_id": [ { "id": "ERF86_ARATH", "url": "https://www.uniprot.org/uniprot/Q6J9Q2", "type": "external" } ], "mass": 38455.0, "length": 348, "protein_name": "Ethylene-responsive transcription factor ERF086", "gene_name": "ERF086", "organism": "Arabidopsis", "refseq_name": "Integrase-type DNA-binding superfamily protein", "refseq_ac": [ { "id": "NP_197357", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_197357", "type": "external" } ], "gene_names_uniprotkb": "ERF086; PUCHI; T28N17.40", "gene_names_refseq": "PUCHI; T28N17.40; T28N17_40", "protein_names_uniprotkb": "Ethylene-responsive transcription factor ERF086", "protein_names_refseq": "Integrase-type DNA-binding superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G18560)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "11130714;16407444;17630277;19482972;23749813;27862469", "class_list": "", "function": "Probably acts as a transcriptional activator. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). Involved in the control of cell division patterns during the early lateral root primordium development. Acts downstream of auxin signaling (PubMed:17630277). Regulated by ARF7 and ARF19 in response to auxin. Co-acts with LBD16 and LBD18 to control lateral root development (PubMed:23749813). Involved in the determination of floral meristem identity and suppression of bract growth. Required for proper conversion of secondary inflorescences to flowers. Acts together with NPR5/BOP2 and NPR6/BOP1 to promote expression of LFY and AP1, two central regulators of floral meristem identity (PubMed:19482972)., [UniProtKB, PubMed, UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0003700 DNA-binding transcription factor activity;GO:0000976 transcription cis-regulatory region binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0009873 ethylene-activated signaling pathway;GO:0009908 flower development;GO:0010102 lateral root morphogenesis;GO:0010582 floral meristem determinacy", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q6J9Q2-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q6NKN9-1", "uniprot_id": [ { "id": "BH074_ARATH", "url": "https://www.uniprot.org/uniprot/Q6NKN9", "type": "external" } ], "mass": 40152.0, "length": 366, "protein_name": "Transcription factor bHLH74", "gene_name": "BHLH74", "organism": "Arabidopsis", "refseq_name": "basic helix-loop-helix (bHLH) DNA-binding superfamily protein", "refseq_ac": [ { "id": "NP_001321212", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001321212", "type": "external" } ], "gene_names_uniprotkb": "BHLH74; ACE2; CIB4; EN90; T27I1.15", "gene_names_refseq": "CIB4; CRY2-interacting bHLH 4; T27I1.15; T27I1_15", "protein_names_uniprotkb": "Transcription factor bHLH74; AtbHLH74; Basic helix-loop-helix protein 74; Protein ACTIVATOR FOR CELL ELONGATION 2; Transcription factor EN 90; bHLH 74; bHLH transcription factor bHLH074", "protein_names_refseq": "basic helix-loop-helix (bHLH) DNA-binding superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G10120)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "11130712;12679534;12897250;14600211;23161888;24130508;27862469", "class_list": "", "function": "Transcriptional activator involved in cell elongation. Regulates the expression of a subset of genes involved in cell expansion by binding to the G-box motif. Binds to chromatin DNA of the FT gene and promotes its expression, and thus triggers flowering in response to blue light (PubMed:24130508)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O80604;Q0WL61;Q0WNX7", "ec_number_list": [], "go_molecular_function": "GO:0003700 DNA-binding transcription factor activity;GO:0046983 protein dimerization activity;GO:0000976 transcription cis-regulatory region binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006355 regulation of DNA-templated transcription;GO:0009637 response to blue light", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q6NKN9-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q6NKR2-1", "uniprot_id": [ { "id": "TPMT2_ARATH", "url": "https://www.uniprot.org/uniprot/Q6NKR2", "type": "external" } ], "mass": 25726.0, "length": 228, "protein_name": "Phosphatidylglycerophosphate phosphatase PTPMT2", "gene_name": "PTPMT2", "organism": "Arabidopsis", "refseq_name": "Phosphotyrosine protein phosphatases superfamily protein", "refseq_ac": [ { "id": "NP_001032084", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001032084", "type": "external" } ], "gene_names_uniprotkb": "PTPMT2; MIK19.6; PTP133", "gene_names_refseq": "MIK19.6; MIK19_6", "protein_names_uniprotkb": "Phosphatidylglycerophosphate phosphatase PTPMT2; 3.1.3.16; 3.1.3.27; 3.1.3.48; Protein TYROSINE PHOSPHATASE LOCALIZED TO THE MITOCHONDRION 2; Putative dual specificity protein phosphatase PTPMT2", "protein_names_refseq": "Phosphotyrosine protein phosphatases superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G56610)", "pathway_count": 1, "publication_count": 3, "publication_id_list": "27862469;29476828;9734815", "class_list": "", "function": "Exhibits phosphatidylglycerophosphate phosphatase activity (PubMed:29476828). Involved in root growth and columella cells organization (PubMed:29476828). May possess protein phosphatase activity (By similarity)., [UniProtKB, UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "F4K7Q7;Q9FJU7", "ec_number_list": [ { "id": "3.1.3.16", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.16", "type": "external" }, { "id": "3.1.3.48", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.48", "type": "external" }, { "id": "3.1.3.27", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.27", "type": "external" }, { "id": "1.20.4.1", "url": "https://www.rhea-db.org/rhea/?query=ec:1.20.4.1", "type": "external" }, { "id": "3.1.3.67", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.67", "type": "external" }, { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.7.13.3", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.13.3", "type": "external" } ], "go_molecular_function": "GO:0004722 protein serine/threonine phosphatase activity;GO:0008962 phosphatidylglycerophosphatase activity;GO:0004725 protein tyrosine phosphatase activity", "go_cellular_component": "GO:0005737 cytoplasm", "go_biological_process": "GO:0006655 phosphatidylglycerol biosynthetic process;GO:0048364 root development", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "Q6NKR2-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q6NKS4-1", "uniprot_id": [ { "id": "LIL32_ARATH", "url": "https://www.uniprot.org/uniprot/Q6NKS4", "type": "external" } ], "mass": 28601.0, "length": 258, "protein_name": "Light-harvesting complex-like protein 3 isotype 2, chloroplastic", "gene_name": "LIL3.2", "organism": "Arabidopsis", "refseq_name": "Chlorophyll A-B binding family protein", "refseq_ac": [ { "id": "NP_199522", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_199522", "type": "external" } ], "gene_names_uniprotkb": "LIL3.2; K14A3.6", "gene_names_refseq": "K14A3.6; K14A3_6; LIL3:2", "protein_names_uniprotkb": "Light-harvesting complex-like protein 3 isotype 2, chloroplastic; LHC-like protein 3 isoform 2", "protein_names_refseq": "Chlorophyll A-B binding family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G47110)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "20823244;24275650;25808681;26320415;27862469", "class_list": "", "function": "Light-harvesting-like protein required for biosynthesis of phytylated chlorophylls and alpha-tocopherol in green seedlings. Functions by anchoring geranylgeranyl reductase (GGR) in the thylakoid membrane, leading to the stabilization of GGR activity (PubMed:20823244, PubMed:24275650). Binds chlorophyll a in the thylakoid membrane (PubMed:26320415). Plays a role in the regulation of chlorophyll biosynthesis under light stress and under standard growth conditions (PubMed:25808681)., [UniProtKB, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 3, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9LTB7", "ec_number_list": [], "go_molecular_function": "GO:0019899 enzyme binding;GO:0042802 identical protein binding;GO:0043495 protein-membrane adaptor activity;GO:0016168 chlorophyll binding", "go_cellular_component": "GO:0009535 chloroplast thylakoid membrane;GO:0009507 chloroplast;GO:0009523 photosystem II;GO:0009536 plastid;GO:0042651 thylakoid membrane", "go_biological_process": "GO:0015979 photosynthesis;GO:1904966 positive regulation of vitamin E biosynthetic process;GO:1902326 positive regulation of chlorophyll biosynthetic process;GO:1904964 positive regulation of phytol biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q6NKS4-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q6NKX5-1", "uniprot_id": [ { "id": "POT1B_ARATH", "url": "https://www.uniprot.org/uniprot/Q6NKX5", "type": "external" } ], "mass": 52572.0, "length": 454, "protein_name": "Protection of telomeres protein 1b", "gene_name": "POT1B", "organism": "Arabidopsis", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "POT1B; MHF15; POT2", "gene_names_refseq": "", "protein_names_uniprotkb": "Protection of telomeres protein 1b; AtPOT1b; AtPot2; Protection of telomeres protein 2", "protein_names_refseq": "", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G06310)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "15589838;15824455;16107718;18387366;19228335;23109676;27651456;27862469;9405937", "class_list": "", "function": "Negatively regulates telomerase activity and participates in chromosome end protection (PubMed:16107718, PubMed:23109676). Binds RNA non-specifically (PubMed:27651456). Associates with a regulatory Pol III-dependent lncRNA, which represses telomerase activity in response to DNA damage (PubMed:23109676). Binds single-stranded telomeric DNA with weak affinity (PubMed:16107718, PubMed:27651456)., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q4W6W7;Q9FNH7", "ec_number_list": [], "go_molecular_function": "GO:0098505 G-rich strand telomeric DNA binding;GO:0003723 RNA binding;GO:0043047 single-stranded telomeric DNA binding;GO:0010521 telomerase inhibitor activity", "go_cellular_component": "GO:0005634 nucleus;GO:0000783 nuclear telomere cap complex", "go_biological_process": "GO:0000723 telomere maintenance;GO:0016233 telomere capping;GO:0032210 regulation of telomere maintenance via telomerase", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "Q6NKX5-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q6NLA5-1", "uniprot_id": [ { "id": "LPPG_ARATH", "url": "https://www.uniprot.org/uniprot/Q6NLA5", "type": "external" } ], "mass": 25754.0, "length": 226, "protein_name": "Lipid phosphate phosphatase gamma", "gene_name": "LPPG", "organism": "Arabidopsis", "refseq_name": "Phosphatidic acid phosphatase (PAP2) family protein", "refseq_ac": [ { "id": "NP_195928", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_195928", "type": "external" } ], "gene_names_uniprotkb": "LPPG; F15A17.110", "gene_names_refseq": "F15A17.110; F15A17_110; LPPgamma; lipid phosphate phosphatase gamma", "protein_names_uniprotkb": "Lipid phosphate phosphatase gamma; 3.1.3.-; AtLPPG; Phosphatidic acid phosphatase gamma; Plastidic phosphatidic acid phosphatase gamma", "protein_names_refseq": "Phosphatidic acid phosphatase (PAP2) family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G03080)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "11130714;17652095;22223895;25561503;27862469", "class_list": "", "function": "Exhibits phosphatidate phosphatase (PAP) activity in vitro. May play a primary role as PAP in plastids., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9LYX7", "ec_number_list": [], "go_molecular_function": "GO:0008195 phosphatidate phosphatase activity", "go_cellular_component": "GO:0009507 chloroplast;GO:0009706 chloroplast inner membrane", "go_biological_process": "GO:0006651 diacylglycerol biosynthetic process;GO:0048868 pollen tube development", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q6NLA5-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q6NLH0-1", "uniprot_id": [ { "id": "RPB9A_ARATH", "url": "https://www.uniprot.org/uniprot/Q6NLH0", "type": "external" } ], "mass": 13276.0, "length": 114, "protein_name": "DNA-directed RNA polymerases II, IV and V subunit 9A", "gene_name": "NRPB9A", "organism": "Arabidopsis", "refseq_name": "RNA polymerases M/15 Kd subunit", "refseq_ac": [ { "id": "NP_188323", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_188323", "type": "external" } ], "gene_names_uniprotkb": "NRPB9A; K14A17; NRPE9A", "gene_names_refseq": "NRPB9A; NRPD9A; NRPE9A", "protein_names_uniprotkb": "DNA-directed RNA polymerases II, IV and V subunit 9A", "protein_names_refseq": "RNA polymerases M/15 Kd subunit", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G16980)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "10819329;19110459;21811420;22550619;27862469", "class_list": "", "function": "DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Component of RNA polymerase II which synthesizes mRNA precursors and many functional non-coding RNAs. Pol II is the central component of the basal RNA polymerase II transcription machinery. It is composed of mobile elements that move relative to each other. Component of RNA polymerases IV and V which mediate short-interfering RNAs (siRNA) accumulation and subsequent RNA-directed DNA methylation-dependent (RdDM) transcriptional gene silencing (TGS) of endogenous repeated sequences, including transposable elements. Required for RNA silencing., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0008270 zinc ion binding;GO:0003676 nucleic acid binding;GO:0003899 DNA-directed RNA polymerase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005730 nucleolus;GO:0005665 RNA polymerase II, core complex;GO:0000419 RNA polymerase V complex", "go_biological_process": "GO:0001193 maintenance of transcriptional fidelity during transcription elongation by RNA polymerase II;GO:0006367 transcription initiation at RNA polymerase II promoter;GO:0006283 transcription-coupled nucleotide-excision repair", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q6NLH0-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q6NLQ7-1", "uniprot_id": [ { "id": "RIBA2_ARATH", "url": "https://www.uniprot.org/uniprot/Q6NLQ7", "type": "external" } ], "mass": 52200.0, "length": 476, "protein_name": "Monofunctional riboflavin biosynthesis protein RIBA 2, chloroplastic", "gene_name": "RIBA2", "organism": "Arabidopsis", "refseq_name": "riboflavin biosynthesis protein", "refseq_ac": [ { "id": "NP_179831", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_179831", "type": "external" } ], "gene_names_uniprotkb": "RIBA2; F14M13.15", "gene_names_refseq": "AtRIBA2; F14M13.15; F14M13_15; RIBA2; homolog of ribA 2", "protein_names_uniprotkb": "Monofunctional riboflavin biosynthesis protein RIBA 2, chloroplastic; GTP cyclohydrolase II", "protein_names_refseq": "riboflavin biosynthesis protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G22450)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "10617197;22081402;23203051;23572148;27862469", "class_list": "", "function": "Involved in riboflavin biosynthesis. Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate. RIBA2 and RIBA3 together are not able to complement the loss of function of RIBA1., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9SJY9", "ec_number_list": [ { "id": "3.5.4.25", "url": "https://www.rhea-db.org/rhea/?query=ec:3.5.4.25", "type": "external" }, { "id": "4.1.99.12", "url": "https://www.rhea-db.org/rhea/?query=ec:4.1.99.12", "type": "external" } ], "go_molecular_function": "GO:0005525 GTP binding;GO:0046872 metal ion binding;GO:0008686 3,4-dihydroxy-2-butanone-4-phosphate synthase activity", "go_cellular_component": "GO:0005886 plasma membrane;GO:0009507 chloroplast", "go_biological_process": "GO:0009231 riboflavin biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q6NLQ7-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q6NLQ8-1", "uniprot_id": [ { "id": "XB32_ARATH", "url": "https://www.uniprot.org/uniprot/Q6NLQ8", "type": "external" } ], "mass": 54586.0, "length": 508, "protein_name": "E3 ubiquitin-protein ligase XBAT32", "gene_name": "XBAT32", "organism": "Arabidopsis", "refseq_name": "uncharacterized protein", "refseq_ac": [ { "id": "NP_200582", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_200582", "type": "external" } ], "gene_names_uniprotkb": "XBAT32; MRI1.10", "gene_names_refseq": "MRI1.10; MRI1_10; XB3 ortholog 2 in Arabidopsis thaliana; XBAT32", "protein_names_uniprotkb": "E3 ubiquitin-protein ligase XBAT32; 2.3.2.27; Ankyrin repeat domain and RING finger-containing protein XBAT32; Protein XB3 homolog 2; RING-type E3 ubiquitin transferase XBAT32", "protein_names_refseq": "uncharacterized protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G57740)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "10470850;15584963;20511490;27862469", "class_list": "", "function": "E3 ubiquitin-protein ligase that mediates ubiquitination of ACC synthases (ACS). Negatively regulates ethylene biosynthesis probably via ubiquitin-dependent degradation of ACS4 and ACS7 enzymes. Regulates lateral root formation and development by controlling ethylene production which inhibits lateral root formation at high concentration., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "Q9FHG9", "ec_number_list": [], "go_molecular_function": "GO:0008270 zinc ion binding;GO:0061630 ubiquitin protein ligase activity;GO:0004842 ubiquitin-protein transferase activity", "go_cellular_component": "", "go_biological_process": "GO:0016567 protein ubiquitination;GO:0006511 ubiquitin-dependent protein catabolic process;GO:0051865 protein autoubiquitination;GO:0009733 response to auxin;GO:0010311 lateral root formation", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "Q6NLQ8-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q6NLU2-1", "uniprot_id": [ { "id": "GRXS7_ARATH", "url": "https://www.uniprot.org/uniprot/Q6NLU2", "type": "external" } ], "mass": 11244.0, "length": 102, "protein_name": "Monothiol glutaredoxin-S7", "gene_name": "GRXS7", "organism": "Arabidopsis", "refseq_name": "Thioredoxin superfamily protein", "refseq_ac": [ { "id": "NP_193302", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_193302", "type": "external" } ], "gene_names_uniprotkb": "GRXS7; FCAALL.355; ROXY14; dl3875w", "gene_names_refseq": "DL3875W; FCAALL.355", "protein_names_uniprotkb": "Monothiol glutaredoxin-S7; AtGrxS7; Protein ROXY 14", "protein_names_refseq": "Thioredoxin superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G15670)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "10617198;15170506;16720602;19218396;27862469;9461215", "class_list": "", "function": "May only reduce GSH-thiol disulfides, but not protein disulfides., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "C1JGQ5;O23418", "ec_number_list": [], "go_molecular_function": "GO:0046872 metal ion binding;GO:0051537 2 iron, 2 sulfur cluster binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q6NLU2-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q6NLW5-1", "uniprot_id": [ { "id": "XRI1_ARATH", "url": "https://www.uniprot.org/uniprot/Q6NLW5", "type": "external" } ], "mass": 33719.0, "length": 300, "protein_name": "Protein XRI1", "gene_name": "XRI1", "organism": "Arabidopsis", "refseq_name": "x-ray induced transcript 1", "refseq_ac": [ { "id": "NP_001154770", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001154770", "type": "external" } ], "gene_names_uniprotkb": "XRI1; K24G6.5", "gene_names_refseq": "K24G6.5; K24G6_5; X-RAY INDUCED TRANSCRIPT 1; X-RAY INDUCED TRANSCRIPT; XRI1; XRI", "protein_names_uniprotkb": "Protein XRI1; Protein X-RAY INDUCED 1", "protein_names_refseq": "x-ray induced transcript 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G48720)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "15506937;19187040;27862469;9734815", "class_list": "", "function": "Required for mitotic division of the generative cell nucleus and the development of mature tricellular pollen grains, and for male and female meiosis., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9FKC4", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006281 DNA repair;GO:0007143 female meiotic nuclear division;GO:0007140 male meiotic nuclear division;GO:0010165 response to X-ray;GO:0009555 pollen development", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "Q6NLW5-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q6NMD6-1", "uniprot_id": [ { "id": "ARGOS_ARATH", "url": "https://www.uniprot.org/uniprot/Q6NMD6", "type": "external" } ], "mass": 14695.0, "length": 130, "protein_name": "Protein AUXIN-REGULATED GENE INVOLVED IN ORGAN SIZE", "gene_name": "ARGOS", "organism": "Arabidopsis", "refseq_name": "auxin-regulated gene involved in organ size", "refseq_ac": [ { "id": "NP_191549", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_191549", "type": "external" } ], "gene_names_uniprotkb": "ARGOS; F24G16.170", "gene_names_refseq": "ARGOS; AUXIN-REGULATED GENE INVOLVED IN ORGAN SIZE", "protein_names_uniprotkb": "Protein AUXIN-REGULATED GENE INVOLVED IN ORGAN SIZE; AtARGOS", "protein_names_refseq": "auxin-regulated gene involved in organ size", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G59900)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "11130713;12953103;17435248;21457262;23134674;27862469", "class_list": "", "function": "Promotes cell proliferation-dependent organ growth. Takes part in the AXR1-dependent auxin signaling pathway that requires ANT during organogenesis., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9M1Y4", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005739 mitochondrion;GO:0005783 endoplasmic reticulum;GO:0016020 membrane", "go_biological_process": "GO:0042127 regulation of cell population proliferation;GO:0048638 regulation of developmental growth;GO:0046622 positive regulation of organ growth;GO:0009733 response to auxin;GO:0071369 cellular response to ethylene stimulus", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q6NMD6-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q6NME7-1", "uniprot_id": [ { "id": "TEN1_ARATH", "url": "https://www.uniprot.org/uniprot/Q6NME7", "type": "external" } ], "mass": 14378.0, "length": 127, "protein_name": "CST complex subunit TEN1", "gene_name": "TEN1", "organism": "Arabidopsis", "refseq_name": "telomere-capping, CST complex subunit", "refseq_ac": [ { "id": "NP_001321732", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001321732", "type": "external" } ], "gene_names_uniprotkb": "TEN1; F14G9.13; MDO1", "gene_names_refseq": "F14G9.13; F14G9_13; MDO1; MERISTEM DISORGANIZATION 1; TEN1; telomeric pathways in association with Stn1", "protein_names_uniprotkb": "CST complex subunit TEN1; Protein MERISTEM DISORGANIZATION 1; Protein telomeric pathways with STN1 homolog", "protein_names_refseq": "telomere-capping, CST complex subunit", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G56260)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "11130712;21781195;23572541;25329641;27862469", "class_list": "", "function": "Required for the maintenance of meristems and stem cells through the reduction of DNA damage (PubMed:21781195). Promotes telomere integrity by maintaining telomere length and proper architecture of the chromosome terminus (PubMed:23572541). Negatively regulates telomerase repeat addition processivity (PubMed:23572541). Hampers contacts between enzymatically active telomerase and CST complex (PubMed:25329641)., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9C7K1", "ec_number_list": [], "go_molecular_function": "GO:0042162 telomeric DNA binding;GO:0003697 single-stranded DNA binding;GO:0044183 protein folding chaperone;GO:0010521 telomerase inhibitor activity", "go_cellular_component": "GO:0000781 chromosome, telomeric region;GO:1990879 CST complex;GO:0009507 chloroplast", "go_biological_process": "GO:0000723 telomere maintenance;GO:0032211 negative regulation of telomere maintenance via telomerase;GO:0019827 stem cell population maintenance;GO:0009408 response to heat;GO:0048367 shoot system development", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q6NME7-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q6NNL3-1", "uniprot_id": [ { "id": "GLV4_ARATH", "url": "https://www.uniprot.org/uniprot/Q6NNL3", "type": "external" } ], "mass": 11972.0, "length": 102, "protein_name": "Protein GOLVEN 4", "gene_name": "GLV4", "organism": "Arabidopsis", "refseq_name": "root meristem growth factor-like protein", "refseq_ac": [ { "id": "NP_186873", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_186873", "type": "external" } ], "gene_names_uniprotkb": "GLV4; CLEL4; F14P3.11; RGF7", "gene_names_refseq": "F14P3.11; F14P3_11; GLV4; GOLVEN 4; RGF7; root meristem growth factor 7", "protein_names_uniprotkb": "Protein GOLVEN 4; AtRGF7; CLAVATA3/ESR (CLE)-related protein CLEL4; CLE-Like protein 4; Root meristem growth factor 7", "protein_names_refseq": "root meristem growth factor-like protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G02240)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "11130713;20798316;22307643;23370719;27862469", "class_list": "", "function": "Signaling peptide (root growth factor) that promotes root hairs formation and growth (PubMed:23370719). Maintains the postembryonic root stem cell niche (PubMed:20798316). Regulates the pattern of root growth and lateral root development by modulating the length and the number of cortical cells in the root apical meristem (RAM), and the anticlinal asymmetric cell divisions in lateral root initiation cells (By similarity)., [UniProtKB, PubMed, PubMed, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9SRU0", "ec_number_list": [], "go_molecular_function": "GO:0008083 growth factor activity", "go_cellular_component": "GO:0005576 extracellular region;GO:0005615 extracellular space", "go_biological_process": "GO:0009786 regulation of asymmetric cell division;GO:0008284 positive regulation of cell population proliferation;GO:0030154 cell differentiation;GO:0010082 regulation of root meristem growth;GO:2000023 regulation of lateral root development", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q6NNL3-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q6NNL9-1", "uniprot_id": [ { "id": "NOXY2_ARATH", "url": "https://www.uniprot.org/uniprot/Q6NNL9", "type": "external" } ], "mass": 9629.0, "length": 93, "protein_name": "Protein NONRESPONDING TO OXYLIPINS 2, mitochondrial", "gene_name": "NOXY2", "organism": "Arabidopsis", "refseq_name": "uncharacterized protein", "refseq_ac": [ { "id": "NP_001078571", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001078571", "type": "external" } ], "gene_names_uniprotkb": "NOXY2; T22P22.20", "gene_names_refseq": "NOXY2; T22P22.20; T22P22_20; nonresponding to oxylipins 2", "protein_names_uniprotkb": "Protein NONRESPONDING TO OXYLIPINS 2, mitochondrial", "protein_names_refseq": "uncharacterized protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G11630)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "11130714;17369372;23370715;26417008;27862469", "class_list": "", "function": "Essential for mitochondrial morphology, functionality and distribution (PubMed:23370715). Contributes to 9-lipoxygenase (9-LOX)-derived oxylipin synthesis, but not to brassinosteroids (BRs) signaling (PubMed:26417008). Required for waving-inducing oxylipin 9-hydroxyoctadecatrienoic acid and derivatives (e.g. 9-HOT, 2-HOE, 13-HOT, 13-HOD, 13-KOD, 12,13-KHOD, 9-HOT, 9-HOD, 9-KOT, 9-KOD and 9,10-KHOE)-mediated root development regulation, including callose deposition, root waving and lateral roots formation (PubMed:17369372, PubMed:23370715, PubMed:26417008). Involved in basal plant defense toward pathogenic bacteria (e.g. Pseudomonas syringae pv tomato), both in compatible (e.g. Pst DC3000) and incompatible (e.g. Pst DC3000 avrRPM1) interactions, as well as against obligate biotrophic pathogenic fungi (e.g. Golovinomyces cichoracearum), probably via the promotion of callose deposition in the cell wall (PubMed:17369372, PubMed:23370715, PubMed:26417008). Confers sensitivity to the herbicide isoxaben, a herbicide inhibiting cellulose synthesis and altering the cell wall (PubMed:23370715)., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9LYG7", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005739 mitochondrion", "go_biological_process": "GO:0009617 response to bacterium;GO:0042742 defense response to bacterium;GO:0019372 lipoxygenase pathway;GO:0048311 mitochondrion distribution;GO:0009635 response to herbicide", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q6NNL9-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q6NNP0-1", "uniprot_id": [ { "id": "ATG16_ARATH", "url": "https://www.uniprot.org/uniprot/Q6NNP0", "type": "external" } ], "mass": 56427.0, "length": 509, "protein_name": "Autophagy-related protein 16", "gene_name": "ATG16", "organism": "Arabidopsis", "refseq_name": "Transducin/WD40 repeat-like superfamily protein", "refseq_ac": [ { "id": "NP_199834", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_199834", "type": "external" } ], "gene_names_uniprotkb": "ATG16; K6A12.9", "gene_names_refseq": "K6A12.9; K6A12_9", "protein_names_uniprotkb": "Autophagy-related protein 16", "protein_names_refseq": "Transducin/WD40 repeat-like superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G50230)", "pathway_count": 1, "publication_count": 3, "publication_id_list": "10718197;17204848;27862469", "class_list": "", "function": "May play a role in autophagy., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9FGS2", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0000045 autophagosome assembly;GO:0015031 protein transport", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "Q6NNP0-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q6NPM8-1", "uniprot_id": [ { "id": "HIS7_ARATH", "url": "https://www.uniprot.org/uniprot/Q6NPM8", "type": "external" } ], "mass": 38235.0, "length": 346, "protein_name": "Bifunctional phosphatase IMPL2, chloroplastic", "gene_name": "HISN7", "organism": "Arabidopsis", "refseq_name": "inositol monophosphatase family protein", "refseq_ac": [ { "id": "NP_001320164", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001320164", "type": "external" } ], "gene_names_uniprotkb": "HISN7; IMPL2; T22F8.20", "gene_names_refseq": "HISN7; HISTIDINE BIOSYNTHESIS 7; IMPL2; T22F8.20; T22F8_20; myo-inositol monophosphatase like 2", "protein_names_uniprotkb": "Bifunctional phosphatase IMPL2, chloroplastic; 3.1.3.15; 3.1.3.25; 3.1.3.93; HPP; Histidinol-phosphatase; Histidinol-phosphate phosphatase; Inositol-phosphate phosphatase; L-galactose 1-phosphate phosphatase; Protein HISTIDINE BIOSYNTHESIS 7; Protein MYO-INOSITOL MONOPHOSPHATASE-LIKE 2", "protein_names_refseq": "inositol monophosphatase family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G39120)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "10617198;11910074;16547652;17434988;18431481;19339506;20023146;20960216;27862469", "class_list": "", "function": "Phosphatase required for histidine production. Also acts on L-galactose 1-phosphate (L-Gal 1-P), D-myoinositol 3-phosphate (D-Ins 3-P) and D-myoinositol 1-phosphate (D-Ins 1-P)., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A1P8B6U8;F4JV95;Q67Y38;Q9T021", "ec_number_list": [ { "id": "3.1.3.25", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.25", "type": "external" }, { "id": "3.1.3.15", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.15", "type": "external" }, { "id": "3.1.3.93", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.93", "type": "external" } ], "go_molecular_function": "GO:0042578 phosphoric ester hydrolase activity;GO:0052834 inositol monophosphate phosphatase activity;GO:0046872 metal ion binding;GO:0008934 inositol monophosphate 1-phosphatase activity;GO:0004401 histidinol-phosphatase activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0009507 chloroplast", "go_biological_process": "GO:0006021 inositol biosynthetic process;GO:0000105 L-histidine biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "Q6NPM8-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q6NPN4-1", "uniprot_id": [ { "id": "LYM3_ARATH", "url": "https://www.uniprot.org/uniprot/Q6NPN4", "type": "external" } ], "mass": 44152.0, "length": 423, "protein_name": "LysM domain-containing GPI-anchored protein 3", "gene_name": "LYM3", "organism": "Arabidopsis", "refseq_name": "Peptidoglycan-binding LysM domain-containing protein", "refseq_ac": [ { "id": "NP_177886", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_177886", "type": "external" } ], "gene_names_uniprotkb": "LYM3; T5M16.22", "gene_names_refseq": "LYM3; LYP3; LysM-containing receptor protein 3; T5M16.22; T5M16_22; lysin-motif (LysM) domain protein 3", "protein_names_uniprotkb": "LysM domain-containing GPI-anchored protein 3", "protein_names_refseq": "Peptidoglycan-binding LysM domain-containing protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G77630)", "pathway_count": 1, "publication_count": 3, "publication_id_list": "11130712;22106285;27862469", "class_list": "", "function": "Required as a cell surface receptor for peptidoglycan (PGN) elicitor signaling leading to innate immunity. Plays an essential role in detecting PGNs and restricting bacterial growth (of Pseudomonas syringae pv. tomato DC3000 for example)., [UniProtKB, PubMed]", "predicted_glycosites": 3, "predicted_n_glycosites": 3, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 3, "binding_glycan_count": 0, "secondary_ac_list": "Q9CAP5", "ec_number_list": [], "go_molecular_function": "GO:0042834 peptidoglycan binding", "go_cellular_component": "GO:0005886 plasma membrane;GO:0016020 membrane;GO:0098552 side of membrane", "go_biological_process": "GO:0006952 defense response;GO:0006955 immune response", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "Q6NPN4-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000010000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q6NPP4-1", "uniprot_id": [ { "id": "CMTA2_ARATH", "url": "https://www.uniprot.org/uniprot/Q6NPP4", "type": "external" } ], "mass": 117258.0, "length": 1050, "protein_name": "Calmodulin-binding transcription activator 2", "gene_name": "CAMTA2", "organism": "Arabidopsis", "refseq_name": "Calmodulin-binding transcription activator protein with CG-1 and Ankyrin domain", "refseq_ac": [ { "id": "NP_001032135", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001032135", "type": "external" } ], "gene_names_uniprotkb": "CAMTA2; CMTA2; MSJ1.6; SR4", "gene_names_refseq": "CAMTA2; MSJ1.6; MSJ1_6; calmodulin-binding transcription activator 2", "protein_names_uniprotkb": "Calmodulin-binding transcription activator 2; AtCAMTA2; AtER66; AtSR4; EICBP.c; Ethylene-induced calmodulin-binding protein c; Signal-responsive protein 4", "protein_names_refseq": "Calmodulin-binding transcription activator protein with CG-1 and Ankyrin domain", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G64220)", "pathway_count": 1, "publication_count": 24, "publication_id_list": "11162426;11782485;11925432;12218065;14581622;18463617;19245862;19376835;20466843;21768351;23111157;23572148;23581962;23660473;23776212;25039701;25561503;25627216;27862469;28011693;28351986;29654922;30833711;9501997", "class_list": "", "function": "Transcription activator that binds to the DNA consensus sequence 5'-[ACG]CGCG[GTC]-3' (By similarity). Regulates transcriptional activity in response to calcium signals (Probable). Binds calmodulin in a calcium-dependent manner (By similarity). Involved in freezing tolerance in association with CAMTA1 and CAMTA3. Contributes together with CAMTA1 and CAMTA3 to the positive regulation of the cold-induced expression of DREB1A/CBF3, DREB1B/CBF1 and DREB1C/CBF2 (PubMed:23581962). Involved together with CAMTA3 and CAMTA4 in the positive regulation of a general stress response (PubMed:25039701). Involved in tolerance to aluminum. Binds to the promoter of ALMT1 transporter and contributes to the positive regulation of aluminum-induced expression of ALMT1 (PubMed:25627216)., [UniProtKB, PubMed, PubMed, UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 9, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q0WNN4;Q9FMG3", "ec_number_list": [], "go_molecular_function": "GO:0003700 DNA-binding transcription factor activity;GO:0005516 calmodulin binding;GO:0003690 double-stranded DNA binding;GO:0000976 transcription cis-regulatory region binding;GO:0003712 transcription coregulator activity", "go_cellular_component": "GO:0005634 nucleus;GO:0009507 chloroplast", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006357 regulation of transcription by RNA polymerase II;GO:0009409 response to cold;GO:0006355 regulation of DNA-templated transcription;GO:0045893 positive regulation of DNA-templated transcription", "synthesized_glycan_count": 0, "hit_score": 2.5, "record_id": "Q6NPP4-1", "record_type": "protein", "filter_code": "0000000.0000101.010000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q6NPS8-1", "uniprot_id": [ { "id": "NDOR1_ARATH", "url": "https://www.uniprot.org/uniprot/Q6NPS8", "type": "external" } ], "mass": 70412.0, "length": 623, "protein_name": "NADPH-dependent diflavin oxidoreductase 1", "gene_name": "ATR3", "organism": "Arabidopsis", "refseq_name": "Flavodoxin family protein", "refseq_ac": [ { "id": "NP_001327241", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001327241", "type": "external" } ], "gene_names_uniprotkb": "ATR3; F14P3.7", "gene_names_refseq": "AtTAH18; F14P3.7; F14P3_7; TAH18", "protein_names_uniprotkb": "NADPH-dependent diflavin oxidoreductase 1; 1.18.1.-; NADPH-dependent FMN and FAD-containing oxidoreductase", "protein_names_refseq": "Flavodoxin family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G02280)", "pathway_count": 1, "publication_count": 3, "publication_id_list": "11130713;20406405;27862469", "class_list": "", "function": "NADPH-dependent reductase which is a central component of the cytosolic iron-sulfur (Fe-S) protein assembly (CIA) machinery. Transfers electrons from NADPH via its FAD and FMN prosthetic groups to the [2Fe-2S] cluster of the anamorsin/DRE2 homolog, another key component of the CIA machinery. In turn, this reduced cluster provides electrons for assembly of cytosolic iron-sulfur cluster proteins (By similarity). Catalyzes the NADP-dependent reduction of cytochrome c, but not cytochrome P450 in vitro. Required for embryo development (PubMed:20406405)., [UniProtKB, HAMAP, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A1I9LRQ3;Q9SRU4", "ec_number_list": [ { "id": "1.18.1.-", "url": "https://www.rhea-db.org/rhea/?query=ec:1.18.1.-", "type": "external" } ], "go_molecular_function": "GO:0050660 flavin adenine dinucleotide binding;GO:0016491 oxidoreductase activity;GO:0016651 oxidoreductase activity, acting on NAD(P)H;GO:0010181 FMN binding;GO:0050661 NADP binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005829 cytosol", "go_biological_process": "GO:0016226 iron-sulfur cluster assembly;GO:0009793 embryo development ending in seed dormancy", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "Q6NPS8-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q6NQ99-1", "uniprot_id": [ { "id": "POLAR_ARATH", "url": "https://www.uniprot.org/uniprot/Q6NQ99", "type": "external" } ], "mass": 39765.0, "length": 344, "protein_name": "Protein POLAR LOCALIZATION DURING ASYMMETRIC DIVISION AND REDISTRIBUTION", "gene_name": "POLAR", "organism": "Arabidopsis", "refseq_name": "WRKY family transcription factor", "refseq_ac": [ { "id": "NP_567883", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_567883", "type": "external" } ], "gene_names_uniprotkb": "POLAR; F28M20", "gene_names_refseq": "POLAR LOCALIZATION DURING ASYMMETRIC DIVISION AND REDISTRIBUTION; POLAR", "protein_names_uniprotkb": "Protein POLAR LOCALIZATION DURING ASYMMETRIC DIVISION AND REDISTRIBUTION", "protein_names_refseq": "WRKY family transcription factor", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G31805)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "10617198;14593172;21963668;23044038;27862469;30429609", "class_list": "", "function": "Regulates asymmetric cell division (ACD), especially in stomatal-lineage cells (PubMed:21963668). Acts as a stomatal lineage scaffold which regulates subcellular localization and transient polarization of kinases (e.g. ASK7/BIN2 and ASK3/SK12) involved in ACD in a BASL-dependent manner (PubMed:30429609). Promotes the differentiation of both pavement cells and stomata (PubMed:30429609)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 15, "reported_mutagensis": 27, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0060090 molecular adaptor activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005938 cell cortex;GO:0071944 cell periphery", "go_biological_process": "GO:0008356 asymmetric cell division", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q6NQ99-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q6NQA8-1", "uniprot_id": [ { "id": "APY5_ARATH", "url": "https://www.uniprot.org/uniprot/Q6NQA8", "type": "external" } ], "mass": 53505.0, "length": 488, "protein_name": "Probable apyrase 5", "gene_name": "APY5", "organism": "Arabidopsis", "refseq_name": "GDA1/CD39 nucleoside phosphatase family protein", "refseq_ac": [ { "id": "NP_172877", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_172877", "type": "external" } ], "gene_names_uniprotkb": "APY5; F14L17.1; F7A19", "gene_names_refseq": "", "protein_names_uniprotkb": "Probable apyrase 5; 3.6.1.5; ADPase; ATP-diphosphatase; ATP-diphosphohydrolase; Adenosine diphosphatase; AtAPY5; NTPDase; Nucleoside triphosphate diphosphohydrolase 5", "protein_names_refseq": "GDA1/CD39 nucleoside phosphatase family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G14250)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "11130712;14593172;18463617;20466843;27862469", "class_list": "", "function": "Catalyzes the hydrolysis of phosphoanhydride bonds of nucleoside tri- and di-phosphates., [UniProtKB]", "predicted_glycosites": 1, "predicted_n_glycosites": 1, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "Q9M9T7", "ec_number_list": [ { "id": "3.6.1.5", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.1.5", "type": "external" } ], "go_molecular_function": "GO:0005524 ATP binding;GO:0017110 nucleoside diphosphate phosphatase activity;GO:0004050 apyrase activity", "go_cellular_component": "GO:0005886 plasma membrane;GO:0016020 membrane;GO:0000325 plant-type vacuole", "go_biological_process": "GO:0009134 nucleoside diphosphate catabolic process", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q6NQA8-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000010001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q6NQH4-1", "uniprot_id": [ { "id": "TAF13_ARATH", "url": "https://www.uniprot.org/uniprot/Q6NQH4", "type": "external" } ], "mass": 14254.0, "length": 126, "protein_name": "Transcription initiation factor TFIID subunit 13", "gene_name": "TAF13", "organism": "Arabidopsis", "refseq_name": "TBP-associated factor 13", "refseq_ac": [ { "id": "NP_171768", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_171768", "type": "external" } ], "gene_names_uniprotkb": "TAF13", "gene_names_refseq": "T14P4.32; T14P4_32; TAF13; TBP-associated factor 13", "protein_names_uniprotkb": "Transcription initiation factor TFIID subunit 13; AtTAF13; TBP-associated factor 13", "protein_names_refseq": "TBP-associated factor 13", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G02680)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "11130712;14593172;15527982;17340043;23506837;27862469", "class_list": "", "function": "TAFs are components of the transcription factor IID (TFIID) complex that is essential for mediating regulation of RNA polymerase transcription. May be involved in polycomb repressive complex 2 (PRC2) mediated repression., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0046982 protein heterodimerization activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005886 plasma membrane", "go_biological_process": "GO:0006366 transcription by RNA polymerase II;GO:0009793 embryo development ending in seed dormancy;GO:0009960 endosperm development;GO:0048316 seed development", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q6NQH4-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q6NQI8-1", "uniprot_id": [ { "id": "LOH3_ARATH", "url": "https://www.uniprot.org/uniprot/Q6NQI8", "type": "external" } ], "mass": 36549.0, "length": 308, "protein_name": "Ceramide synthase 1 LOH3", "gene_name": "LOH3", "organism": "Arabidopsis", "refseq_name": "LAG1 longevity assurance-like protein", "refseq_ac": [ { "id": "NP_001031037", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001031037", "type": "external" } ], "gene_names_uniprotkb": "LOH3; F13B4.7; F21F23.1; LAC1", "gene_names_refseq": "F13B4.7; F13B4_7; LAG One Homologue 3; LAG1 longevity assurance homolog 3; LAG13; LOH3", "protein_names_uniprotkb": "Ceramide synthase 1 LOH3; 2.3.1.-; CS1; CSII; LAG One Homolog 3; LAG1 homolog 3; LAG1 longevity assurance homolog 3; Protein LONGEVITY ASSURANCE GENE ONE HOMOLOG 3", "protein_names_refseq": "LAG1 longevity assurance-like protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G13580)", "pathway_count": 1, "publication_count": 16, "publication_id_list": "11130712;14593172;15037448;19423640;21666002;21883234;23111157;23499054;23505340;25561503;25794895;25822663;26276842;26635357;27862469;32407692", "class_list": "", "function": "Essential for plant growth, promotes cell division in root meristems (PubMed:21666002, PubMed:21883234, PubMed:26276842). Catalyzes the biosynthesis of ceramide sphingolipids with C(16) to C(28) fatty acids, structural membrane lipids involved in membrane trafficking (e.g. early endosomes) and cell polarity (e.g. polar auxin transport related proteins); active on a broad substrate spectrum, both regarding chain lengths of fatty acids and the sphingoid base, such as long-chain base (LCB) phytosphingosine (t18:0) (PubMed:21666002, PubMed:21883234, PubMed:26276842, PubMed:26635357). Mediates resistance to sphinganine-analog mycotoxins (SAMs, e.g. fumonisin B(1)) by restoring the sphingolipid biosynthesis (PubMed:26276842). Could salvage the transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi apparatus in ceramides-depleted cells after SAM exposure (By similarity). Contributes to hypoxic conditions tolerance (e.g. submergences), especially in the dark, by promoting the formation of very-long-chain (VLC) ceramide species (22:1, 24:1 and 26:1) and of VLC unsaturated ceramides, which are modulating CTR1-mediated ethylene signaling leading to endoplasmic reticulum (ER)-to-nucleus translocation of EIN2 and EIN3 (PubMed:25822663)., [UniProtKB, PubMed, PubMed, PubMed, UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "C0Z2Q8;Q9FZ69;Q9LMZ0", "ec_number_list": [ { "id": "2.3.1.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.1.-", "type": "external" } ], "go_molecular_function": "GO:0050291 sphingosine N-acyltransferase activity", "go_cellular_component": "GO:0005783 endoplasmic reticulum;GO:0005789 endoplasmic reticulum membrane", "go_biological_process": "GO:0046513 ceramide biosynthetic process;GO:0006665 sphingolipid metabolic process;GO:0010256 endomembrane system organization;GO:0042761 very long-chain fatty acid biosynthetic process;GO:2000012 regulation of auxin polar transport", "synthesized_glycan_count": 0, "hit_score": 1.7, "record_id": "Q6NQI8-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q6NQJ6-1", "uniprot_id": [ { "id": "RNR1_ARATH", "url": "https://www.uniprot.org/uniprot/Q6NQJ6", "type": "external" } ], "mass": 90679.0, "length": 803, "protein_name": "Ribonuclease II, chloroplastic/mitochondrial", "gene_name": "RNR1", "organism": "Arabidopsis", "refseq_name": "Ribonuclease II/R family protein", "refseq_ac": [ { "id": "NP_195845", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_195845", "type": "external" } ], "gene_names_uniprotkb": "RNR1; EMB2730; T1E22.10", "gene_names_refseq": "ARABIDOPSIS THALIANA MITOCHONDRIAL RNASE II; ATMTRNASEII; EMB2730; EMBRYO DEFECTIVE 2730; RNR1; T1E22.10; T1E22_10; ribonucleotide reductase 1", "protein_names_uniprotkb": "Ribonuclease II, chloroplastic/mitochondrial; 3.1.13.1; AtmtRNaseII; Protein EMBRYO DEFECTIVE 2730; RNase II; Ribonucleotide reductase 1", "protein_names_refseq": "Ribonuclease II/R family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G02250)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "11130714;14593172;15037609;15891117;27862469;29167316", "class_list": "", "function": "3'-5' exoribonuclease that catalyzes 3' maturation of chloroplast and mitochondrion ribosomal RNAs; degrades short nucleotidic extensions to generate the mature 3'-ends. Involved in the maturation of 23S, 16S and 5S rRNAs., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 4, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "Q9LZA0", "ec_number_list": [], "go_molecular_function": "GO:0008859 exoribonuclease II activity;GO:0003723 RNA binding;GO:0000175 3'-5'-RNA exonuclease activity", "go_cellular_component": "GO:0005739 mitochondrion;GO:0005886 plasma membrane;GO:0000932 P-body;GO:0009507 chloroplast", "go_biological_process": "GO:0006402 mRNA catabolic process;GO:0006364 rRNA processing;GO:0009658 chloroplast organization", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q6NQJ6-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000001001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q6NQK2-1", "uniprot_id": [ { "id": "NAC8_ARATH", "url": "https://www.uniprot.org/uniprot/Q6NQK2", "type": "external" } ], "mass": 50289.0, "length": 449, "protein_name": "SUPPRESSOR OF GAMMA RESPONSE 1", "gene_name": "SOG1", "organism": "Arabidopsis", "refseq_name": "NAC (No Apical Meristem) domain transcriptional regulator superfamily protein", "refseq_ac": [ { "id": "NP_564238", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_564238", "type": "external" } ], "gene_names_uniprotkb": "SOG1; F14G11.2; F2J7.1; NAC008", "gene_names_refseq": "ANAC008; Arabidopsis NAC domain containing protein 8; F2J7.1; SOG1; SUPPRESSOR OF GAMMA RADIATION 1", "protein_names_uniprotkb": "SUPPRESSOR OF GAMMA RESPONSE 1; ANAC008; NAC domain-containing protein 8; Protein SOG1; Protein SUPPRESSOR OF GAMMA RADIATION 1", "protein_names_refseq": "NAC (No Apical Meristem) domain transcriptional regulator superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G25580)", "pathway_count": 1, "publication_count": 12, "publication_id_list": "11130712;14593172;15029955;19549833;20634150;23111157;23907539;24399300;24736489;27658920;27862469;33793856", "class_list": "", "function": "Transcription factor regulating the transcriptional activation response to gamma irradiation (PubMed:19549833). Required for stem-cell death induced by UVB or by gamma irradiation (PubMed:20634150). Not required for ATM activation, but participates in pathways governed by both ATM and ATR sensor kinases (PubMed:19549833). Involved in DNA damage response (DDR) system that regulates cell cycle arrest (PubMed:24399300). Functional homolog of animal p53 (PubMed:24736489). Regulates SMR5 and SMR7 transcription (PubMed:24399300). Regulates DNA repair and cytokinin signaling separately and plays a key role in controlling lateral root formation under genotoxic stress. Required for the CK2-triggered stem cell exhaustion under aluminum (Al) toxicity and phosphate deficiency (Pi), which relies on the activation of the DNA damage response pathway (PubMed:33793856)., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 2, "predicted_n_glycosites": 0, "predicted_o_glycosites": 2, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 7, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 2, "binding_glycan_count": 0, "secondary_ac_list": "Q9C610;Q9C6M7", "ec_number_list": [], "go_molecular_function": "GO:0003677 DNA binding;GO:0003700 DNA-binding transcription factor activity;GO:0000976 transcription cis-regulatory region binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0010332 response to gamma radiation;GO:0006355 regulation of DNA-templated transcription;GO:0000077 DNA damage checkpoint signaling;GO:0040020 regulation of meiotic nuclear division", "synthesized_glycan_count": 0, "hit_score": 1.3, "record_id": "Q6NQK2-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000001001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q6NQN8-1", "uniprot_id": [ { "id": "VLG_ARATH", "url": "https://www.uniprot.org/uniprot/Q6NQN8", "type": "external" } ], "mass": 27954.0, "length": 248, "protein_name": "Protein VACUOLELESS GAMETOPHYTES", "gene_name": "VLG", "organism": "Arabidopsis", "refseq_name": "Cysteine/Histidine-rich C1 domain family protein", "refseq_ac": [ { "id": "NP_179365", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_179365", "type": "external" } ], "gene_names_uniprotkb": "VLG; T17A5.16", "gene_names_refseq": "T17A5.16; T17A5_16", "protein_names_uniprotkb": "Protein VACUOLELESS GAMETOPHYTES", "protein_names_refseq": "Cysteine/Histidine-rich C1 domain family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G17740)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "10617197;14593172;16678099;27862469;28107777", "class_list": "", "function": "Essential for development of both female (megagametogenesis) and male (microgametogenesis) gametophytes by promoting the formation of large vacuoles early in development, maybe via the regulation of vesicular fusion., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0008270 zinc ion binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005771 multivesicular body", "go_biological_process": "GO:0009617 response to bacterium;GO:0002237 response to molecule of bacterial origin;GO:0002238 response to molecule of fungal origin;GO:0009561 megagametogenesis;GO:0055046 microgametogenesis", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q6NQN8-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q6Q152-1", "uniprot_id": [ { "id": "CPY57_ARATH", "url": "https://www.uniprot.org/uniprot/Q6Q152", "type": "external" } ], "mass": 56515.0, "length": 504, "protein_name": "Peptidyl-prolyl cis-trans isomerase CYP57", "gene_name": "CYP57", "organism": "Arabidopsis", "refseq_name": "Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein", "refseq_ac": [ { "id": "NP_195032", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_195032", "type": "external" } ], "gene_names_uniprotkb": "CYP57; F4I10.3", "gene_names_refseq": "AtCYP57; CYP57; F4I10.3; cyclophilin 57", "protein_names_uniprotkb": "Peptidyl-prolyl cis-trans isomerase CYP57; 5.2.1.8; Cyclophilin of 57 kDa; Cyclophilin-57; PPIase CYP57", "protein_names_refseq": "Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G33060)", "pathway_count": 1, "publication_count": 18, "publication_id_list": "10617198;15047905;15051864;19376835;20466843;21768351;22223895;23111157;23328941;23572148;23660473;23776212;24440291;25561503;26091701;26187819;27862469;30833711", "class_list": "", "function": "PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides (By similarity). Involved in plant response to pathogen infection by increasing PAD4 expression in absence of EDS1 up-regulation., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 7, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O82646;Q0WU97", "ec_number_list": [ { "id": "5.2.1.8", "url": "https://www.rhea-db.org/rhea/?query=ec:5.2.1.8", "type": "external" }, { "id": "2.3.2.27", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.2.27", "type": "external" } ], "go_molecular_function": "GO:0003755 peptidyl-prolyl cis-trans isomerase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0071013 catalytic step 2 spliceosome;GO:0009506 plasmodesma", "go_biological_process": "GO:0006457 protein folding", "synthesized_glycan_count": 0, "hit_score": 1.9, "record_id": "Q6Q152-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q6Q1P4-1", "uniprot_id": [ { "id": "SMC1_ARATH", "url": "https://www.uniprot.org/uniprot/Q6Q1P4", "type": "external" } ], "mass": 140912.0, "length": 1218, "protein_name": "Structural maintenance of chromosomes protein 1", "gene_name": "SMC1", "organism": "Arabidopsis", "refseq_name": "Structural maintenance of chromosomes (SMC) family protein", "refseq_ac": [ { "id": "NP_001319748", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001319748", "type": "external" } ], "gene_names_uniprotkb": "SMC1; T5N23.30; TTN8", "gene_names_refseq": "ATSMC1; SMC1; STRUCTURAL MAINTENANCE OF CHROMOSOMES 1; TITAN8; TTN8", "protein_names_uniprotkb": "Structural maintenance of chromosomes protein 1; Chromosome segregation protein SMC-1; Cohesin complex subunit SMC-1; Protein TITAN8; SMC protein 1; SMC-1", "protein_names_refseq": "Structural maintenance of chromosomes (SMC) family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G54670)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "11130713;11788751;11846874;15972315;18463617;19533160;20466843;27862469;29167316", "class_list": "", "function": "Central component of cohesin, a complex required for chromosome cohesion during the cell cycle. The cohesin complex may form a large proteinaceous ring within which sister chromatids can be trapped. At anaphase, the complex is cleaved and dissociates from chromatin, allowing sister chromatids to segregate. Cohesion is coupled to DNA replication and is involved in DNA repair. The cohesin complex also plays an important role in spindle pole assembly during mitosis and in chromosomes movement (By similarity). Essential protein plant viability. Required for chromosome segregation (e.g. sister chromatid alignment) and cell division during embryogenesis., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 7, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "F4JE01;F4JE02;Q0WSY5;Q9M1T3", "ec_number_list": [], "go_molecular_function": "GO:0003677 DNA binding;GO:0005524 ATP binding;GO:0016887 ATP hydrolysis activity", "go_cellular_component": "GO:0005634 nucleus;GO:0008278 cohesin complex", "go_biological_process": "GO:0006281 DNA repair;GO:0007059 chromosome segregation;GO:0051301 cell division;GO:0051321 meiotic cell cycle;GO:0007062 sister chromatid cohesion", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "Q6Q1P4-1", "record_type": "protein", "filter_code": "0000000.0000101.010000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q6Q4D0-1", "uniprot_id": [ { "id": "TONS_ARATH", "url": "https://www.uniprot.org/uniprot/Q6Q4D0", "type": "external" } ], "mass": 146482.0, "length": 1311, "protein_name": "Protein TONSOKU", "gene_name": "TSK", "organism": "Arabidopsis", "refseq_name": "tetratricopeptide repeat (TPR)-containing protein", "refseq_ac": [ { "id": "NP_188503", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_188503", "type": "external" } ], "gene_names_uniprotkb": "TSK; BRU1; MGOUN3; MVE11.9", "gene_names_refseq": "BRU1; BRUSHY1; MGO3; MGOUN3; TONSOKU; TSK", "protein_names_uniprotkb": "Protein TONSOKU; Protein BRUSHY 1; Protein MGOUN 3", "protein_names_refseq": "tetratricopeptide repeat (TPR)-containing protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G18730)", "pathway_count": 1, "publication_count": 11, "publication_id_list": "10819329;14966212;15082530;15125773;15746155;15964904;16728410;20466843;21705754;27862469;35298257", "class_list": "", "function": "Histone reader involved in homologous recombination-mediated repair of double-strand breaks (DSBs) at stalled or collapsed replication forks (PubMed:35298257). Specifically recognizes and binds histone H3.1 lacking methylation at 'Lys-27' (H3K27me1) (PubMed:35298257). Involved in structural and functional stabilization of chromatin; represents a link between response to DNA damage and epigenetic gene silencing (PubMed:14966212, PubMed:15082530, PubMed:16728410, PubMed:21705754). Required for cell arrangement in root and shoot apical meristems (PubMed:14966212, PubMed:15082530, PubMed:16728410, PubMed:21705754). May be involved, when interacting with TSA1, in the organization of spindle microtubules (PubMed:15964904)., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q6IE93;Q769D5;Q7XAG5;Q9LSA4", "ec_number_list": [], "go_molecular_function": "GO:0042393 histone binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005654 nucleoplasm;GO:0005737 cytoplasm;GO:0005694 chromosome", "go_biological_process": "GO:0051301 cell division;GO:0000086 G2/M transition of mitotic cell cycle;GO:0000724 double-strand break repair via homologous recombination;GO:0040029 epigenetic regulation of gene expression;GO:0072423 response to DNA damage checkpoint signaling", "synthesized_glycan_count": 0, "hit_score": 1.2, "record_id": "Q6Q4D0-1", "record_type": "protein", "filter_code": "0000000.0100101.010000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q6R053-1", "uniprot_id": [ { "id": "MYB56_ARATH", "url": "https://www.uniprot.org/uniprot/Q6R053", "type": "external" } ], "mass": 36892.0, "length": 323, "protein_name": "Transcription factor MYB56", "gene_name": "MYB56", "organism": "Arabidopsis", "refseq_name": "myb domain protein 56", "refseq_ac": [ { "id": "NP_197282", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_197282", "type": "external" } ], "gene_names_uniprotkb": "MYB56; BRAVO; MVA3.16", "gene_names_refseq": "AtMYB56; BRASSINOSTEROIDS AT VASCULAR AND ORGANIZING CENTER; BRAVO; MVA3.150; MVA3_150; MYB56; myb domain protein 56", "protein_names_uniprotkb": "Transcription factor MYB56; AtMYB56; Myb-related protein 56; Protein BRASSINOSTEROIDS AT VASCULAR AND ORGANIZING CENTER", "protein_names_refseq": "myb domain protein 56", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G17800)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "16463103;16581911;23911125;24981610;25343985;27862469;9405937;9839469", "class_list": "", "function": "Acts as a cell-specific local repressor of quiescent center (QC) self-renewal by cell divisions in the primary root. Counteracts brassinosteroid (BR)-mediated cell division in the QC cells (PubMed:24981610). Regulates maternally seed size, especially before the heart stage, promoting both endothelial cells expansion and cell number in the outer integument layer of the seed coat (PubMed:23911125). Modulates the expression of genes involved in cell wall metabolism such as cell division and expansion (PubMed:23911125, PubMed:24981610). Negative regulator of flowering via the repression of FT transcription (PubMed:25343985)., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9FN72;Q9ZTD6", "ec_number_list": [], "go_molecular_function": "GO:0003700 DNA-binding transcription factor activity;GO:0042803 protein homodimerization activity;GO:0000976 transcription cis-regulatory region binding;GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding;GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific", "go_cellular_component": "GO:0005634 nucleus;GO:0005829 cytosol", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006355 regulation of DNA-templated transcription;GO:0045893 positive regulation of DNA-templated transcription;GO:0001935 endothelial cell proliferation;GO:0051782 negative regulation of cell division", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "Q6R053-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q6R0C4-1", "uniprot_id": [ { "id": "MYB52_ARATH", "url": "https://www.uniprot.org/uniprot/Q6R0C4", "type": "external" } ], "mass": 28925.0, "length": 249, "protein_name": "Transcription factor MYB52", "gene_name": "MYB52", "organism": "Arabidopsis", "refseq_name": "myb domain protein 52", "refseq_ac": [ { "id": "NP_173237", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_173237", "type": "external" } ], "gene_names_uniprotkb": "MYB52; AHS1; F2H15.17", "gene_names_refseq": "ATMYB52; BW52; F2H15.17; F2H15_17; MYB DOMAIN PROTEIN 52; MYB52; myb domain protein 52", "protein_names_uniprotkb": "Transcription factor MYB52; AtMYB52; Myb-related protein 52; Protein ABA-HYPERSENSITIVE 1", "protein_names_refseq": "myb domain protein 52", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G17950)", "pathway_count": 1, "publication_count": 11, "publication_id_list": "11130712;16463103;18952777;19325888;19674407;21399993;22197883;23781226;27862469;9628022;9839469", "class_list": "", "function": "Transcription factor that confers sensitivity to abscisic acid (ABA) and salt, but tolerance to drought (PubMed:21399993). Regulates secondary cell wall (SCW) biosynthesis, especially in interfascicular and xylary fibers (PubMed:18952777, PubMed:23781226)., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q8LCC8;Q9LMT5;Q9ZTD9", "ec_number_list": [], "go_molecular_function": "GO:0003700 DNA-binding transcription factor activity;GO:0000976 transcription cis-regulatory region binding;GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding;GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006355 regulation of DNA-templated transcription;GO:0009414 response to water deprivation;GO:1902074 response to salt;GO:0071555 cell wall organization", "synthesized_glycan_count": 0, "hit_score": 1.2, "record_id": "Q6R0C4-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q6R2K1-1", "uniprot_id": [ { "id": "SRF5_ARATH", "url": "https://www.uniprot.org/uniprot/Q6R2K1", "type": "external" } ], "mass": 76945.0, "length": 699, "protein_name": "Protein STRUBBELIG-RECEPTOR FAMILY 5", "gene_name": "SRF5", "organism": "Arabidopsis", "refseq_name": "STRUBBELIG-receptor family 5", "refseq_ac": [ { "id": "NP_178019", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_178019", "type": "external" } ], "gene_names_uniprotkb": "SRF5; YUP8H12R.40", "gene_names_refseq": "SRF5; STRUBBELIG-receptor family 5; YUP8H12R.40; YUP8H12R_40", "protein_names_uniprotkb": "Protein STRUBBELIG-RECEPTOR FAMILY 5; Leucine-rich repeat receptor kinase-like protein SRF5", "protein_names_refseq": "STRUBBELIG-receptor family 5", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G78980)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "11130712;17397538;22440515;27862469", "class_list": "", "function": "", "predicted_glycosites": 1, "predicted_n_glycosites": 1, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 3, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "O64550", "ec_number_list": [], "go_molecular_function": "GO:0004672 protein kinase activity;GO:0005524 ATP binding", "go_cellular_component": "GO:0005886 plasma membrane;GO:0009507 chloroplast", "go_biological_process": "GO:0007165 signal transduction", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "Q6R2K1-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000010001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q6R8G6-1", "uniprot_id": [ { "id": "PHO14_ARATH", "url": "https://www.uniprot.org/uniprot/Q6R8G6", "type": "external" } ], "mass": 86986.0, "length": 745, "protein_name": "Phosphate transporter PHO1 homolog 4", "gene_name": "PHO1-H4", "organism": "Arabidopsis", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "PHO1-H4; T30C3.10", "gene_names_refseq": "", "protein_names_uniprotkb": "Phosphate transporter PHO1 homolog 4; AtPHO1; H4; Protein PHO1 homolog 4", "protein_names_refseq": "", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G25350)", "pathway_count": 1, "publication_count": 3, "publication_id_list": "10617198;15122012;27862469", "class_list": "", "function": "May transport inorganic phosphate (Pi)., [UniProtKB]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "Q9STK3", "ec_number_list": [], "go_molecular_function": "GO:0005315 phosphate transmembrane transporter activity;GO:0000822 inositol hexakisphosphate binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005829 cytosol;GO:0005886 plasma membrane;GO:0005802 trans-Golgi network", "go_biological_process": "GO:0045793 positive regulation of cell size;GO:0010468 regulation of gene expression;GO:0006817 phosphate ion transport;GO:0016036 cellular response to phosphate starvation;GO:0009960 endosperm development", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "Q6R8G6-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q6STH5-1", "uniprot_id": [ { "id": "HF101_ARATH", "url": "https://www.uniprot.org/uniprot/Q6STH5", "type": "external" } ], "mass": 57764.0, "length": 532, "protein_name": "Fe-S cluster assembly factor HCF101, chloroplastic", "gene_name": "HCF101", "organism": "Arabidopsis", "refseq_name": "ATP binding protein", "refseq_ac": [ { "id": "NP_189086", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_189086", "type": "external" } ], "gene_names_uniprotkb": "HCF101; K7M2.22", "gene_names_refseq": "HCF101; HIGH-CHLOROPHYLL-FLUORESCENCE 101", "protein_names_uniprotkb": "Fe-S cluster assembly factor HCF101, chloroplastic; Protein HIGH CHLOROPHYLL FLUORESCENCE 101", "protein_names_refseq": "ATP binding protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G24430)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "10907853;14645254;14690502;19817716;22223895;27862469", "class_list": "", "function": "Required for photosystem I (PSI) biosynthesis and assembly. May serve as a chloroplast scaffold protein that specifically assembles iron-sulfur (4Fe-4S) clusters and transfers them to the chloroplast PSI and ferredoxin-thioredoxin (FTR) complexes. Can assemble a 4Fe-4S cluster and transfer it to apoproteins in yeast cells. Probably not required for assembly or stability of plastidic 2Fe-2S clusters., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 3, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q8LD16;Q9LK00", "ec_number_list": [], "go_molecular_function": "GO:0005524 ATP binding;GO:0046872 metal ion binding;GO:0051539 4 iron, 4 sulfur cluster binding;GO:0051536 iron-sulfur cluster binding;GO:0140663 ATP-dependent FeS chaperone activity", "go_cellular_component": "GO:0005829 cytosol;GO:0009507 chloroplast;GO:0009570 chloroplast stroma", "go_biological_process": "GO:0016226 iron-sulfur cluster assembly", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q6STH5-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q6TBX7-1", "uniprot_id": [ { "id": "LUT1_ARATH", "url": "https://www.uniprot.org/uniprot/Q6TBX7", "type": "external" } ], "mass": 60555.0, "length": 539, "protein_name": "Carotene epsilon-monooxygenase, chloroplastic", "gene_name": "CYP97C1", "organism": "Arabidopsis", "refseq_name": "Cytochrome P450 superfamily protein", "refseq_ac": [ { "id": "NP_190881", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_190881", "type": "external" } ], "gene_names_uniprotkb": "CYP97C1; LUT1; T4D2.60", "gene_names_refseq": "CYP97C1; CYTOCHROME P450 97C1; LUT1; LUTEIN DEFICIENT 1", "protein_names_uniprotkb": "Carotene epsilon-monooxygenase, chloroplastic; 1.14.14.158; Cytochrome P450 97C1; Protein LUTEIN DEFICIENT 1", "protein_names_refseq": "Cytochrome P450 superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G53130)", "pathway_count": 1, "publication_count": 12, "publication_id_list": "11130713;12782726;14593172;14709673;16890225;18466360;19147649;19376835;19939422;22513258;27862469;32513704", "class_list": "", "function": "Heme-containing cytochrome P450 involved in the biosynthesis of xanthophylls. Specific for epsilon- and beta-ring hydroxylation of alpha-carotene. Has only a low activity toward the beta-rings of beta-carotene. The preferred substrate in planta is not alpha-carotene but the epsilon-ring of zeinoxanthin (PubMed:12782726, PubMed:16890225, PubMed:19147649, PubMed:19939422). Possesses a major beta-carotene hydroxylase activity in planta when depleted in its preferred substrate alpha-carotene (PubMed:22513258)., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 4, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q56ZY1;Q8RWV4;Q9SCP8", "ec_number_list": [ { "id": "1.14.14.158", "url": "https://www.rhea-db.org/rhea/?query=ec:1.14.14.158", "type": "external" } ], "go_molecular_function": "GO:0005506 iron ion binding;GO:0020037 heme binding;GO:0072374 carotene epsilon hydroxylase activity", "go_cellular_component": "GO:0009507 chloroplast;GO:0009941 chloroplast envelope", "go_biological_process": "GO:0016117 carotenoid biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 1.3, "record_id": "Q6TBX7-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q6X7J5-1", "uniprot_id": [ { "id": "WOX8_ARATH", "url": "https://www.uniprot.org/uniprot/Q6X7J5", "type": "external" } ], "mass": 36312.0, "length": 325, "protein_name": "WUSCHEL-related homeobox 8", "gene_name": "WOX8", "organism": "Arabidopsis", "refseq_name": "WUSCHEL related homeobox 8", "refseq_ac": [ { "id": "NP_199410", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_199410", "type": "external" } ], "gene_names_uniprotkb": "WOX8; K15I22.18; STPL", "gene_names_refseq": "MCL19.2; MCL19_2; STIMPY-LIKE; STPL; WOX8; WOX9B; WUSCHEL related homeobox 8; WUSCHEL related homeobox 9B", "protein_names_uniprotkb": "WUSCHEL-related homeobox 8; Protein STIMPY-LIKE", "protein_names_refseq": "WUSCHEL related homeobox 8", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G45980)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "14711878;17706632;21316593;21802295;22427333;22827849;27862469;9405937", "class_list": "", "function": "Probable transcription factor, which may be involved in embryonic patterning (PubMed:14711878). May be required for basal embryo development after fertilization (PubMed:14711878). Acts partially redundantly with STIP in promoting embryonic cell division and proliferation (PubMed:17706632). Promotes cotyledon boundary formation by maintaining the symmetry in CUC genes expression domains (PubMed:22827849)., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9FNM4", "ec_number_list": [], "go_molecular_function": "GO:0003700 DNA-binding transcription factor activity;GO:0000976 transcription cis-regulatory region binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0050793 regulation of developmental process;GO:0006351 DNA-templated transcription;GO:0008284 positive regulation of cell population proliferation;GO:0030010 establishment of cell polarity;GO:0009793 embryo development ending in seed dormancy", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "Q6X7J5-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q6XBF8-1", "uniprot_id": [ { "id": "CDR1_ARATH", "url": "https://www.uniprot.org/uniprot/Q6XBF8", "type": "external" } ], "mass": 46819.0, "length": 437, "protein_name": "Aspartic proteinase CDR1", "gene_name": "CDR1", "organism": "Arabidopsis", "refseq_name": "Eukaryotic aspartyl protease family protein", "refseq_ac": [ { "id": "NP_198319", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_198319", "type": "external" } ], "gene_names_uniprotkb": "CDR1; F19N2.60", "gene_names_refseq": "CDR1; CONSTITUTIVE DISEASE RESISTANCE 1; F19N2.60; F19N2_60", "protein_names_uniprotkb": "Aspartic proteinase CDR1; 3.4.23.-; Protein CONSTITUTIVE DISEASE RESISTANCE 1", "protein_names_refseq": "Eukaryotic aspartyl protease family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G33340)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "11130714;14765119;17147637;22074104;27862469", "class_list": "", "function": "Involved in salicylic acid-dependent inducible resistance responses. May release an endogenous peptide elicitor required for the activation of inducible resistance mechanisms. Possesses protease activity in vitro., [UniProtKB, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 1, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 4, "reported_mutagensis": 2, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0MFJ0", "ec_number_list": [], "go_molecular_function": "GO:0004190 aspartic-type endopeptidase activity", "go_cellular_component": "GO:0005576 extracellular region;GO:0048046 apoplast", "go_biological_process": "GO:0006508 proteolysis;GO:0042742 defense response to bacterium;GO:0010310 regulation of hydrogen peroxide metabolic process;GO:0010337 regulation of salicylic acid metabolic process", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q6XBF8-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000010001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q6XJG8-1", "uniprot_id": [ { "id": "PSD2B_ARATH", "url": "https://www.uniprot.org/uniprot/Q6XJG8", "type": "external" } ], "mass": 97954.0, "length": 891, "protein_name": "26S proteasome non-ATPase regulatory subunit 2 homolog B", "gene_name": "RPN1B", "organism": "Arabidopsis", "refseq_name": "26S proteasome regulatory subunit S2 1B", "refseq_ac": [ { "id": "NP_194576", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_194576", "type": "external" } ], "gene_names_uniprotkb": "RPN1B; F20O9.150", "gene_names_refseq": "26S proteasome regulatory subunit S2 1B; ATRPN1B; F20O9.150; F20O9_150; RPN1B", "protein_names_uniprotkb": "26S proteasome non-ATPase regulatory subunit 2 homolog B; 26S proteasome regulatory subunit RPN1b; 26S proteasome regulatory subunit S2 homolog B; AtRPN1b", "protein_names_refseq": "26S proteasome regulatory subunit S2 1B", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G28470)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "10617198;14623884;16169895;18463617;20466843;20516081;23328941;25561503;27862469", "class_list": "", "function": "Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 3, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O49456", "ec_number_list": [], "go_molecular_function": "GO:0030234 enzyme regulator activity", "go_cellular_component": "GO:0034515 proteasome storage granule;GO:0008540 proteasome regulatory particle, base subcomplex;GO:0005634 nucleus;GO:0005886 plasma membrane;GO:0000502 proteasome complex", "go_biological_process": "GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process;GO:0030163 protein catabolic process;GO:0042176 regulation of protein catabolic process", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "Q6XJG8-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q6XMI3-1", "uniprot_id": [ { "id": "BSMT1_ARATH", "url": "https://www.uniprot.org/uniprot/Q6XMI3", "type": "external" } ], "mass": 43365.0, "length": 379, "protein_name": "Salicylate/benzoate carboxyl methyltransferase", "gene_name": "BSMT1", "organism": "Arabidopsis", "refseq_name": "S-adenosyl-L-methionine-dependent methyltransferases superfamily protein", "refseq_ac": [ { "id": "NP_187755", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_187755", "type": "external" } ], "gene_names_uniprotkb": "BSMT1; F24K9.15", "gene_names_refseq": "ATBSMT1; BSMT1", "protein_names_uniprotkb": "Salicylate/benzoate carboxyl methyltransferase; 2.1.1.273; 2.1.1.274; Benzoate O-methyltransferase; S-adenosyl-L-methionine:benzoic acid carboxyl methyltransferase; S-adenosyl-L-methionine:salicylate acid carboxyl methyltransferase; SABATH methyltransferase; Salicylate carboxymethyltransferase", "protein_names_refseq": "S-adenosyl-L-methionine-dependent methyltransferases superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G11480)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "11130713;14617060;17364223;19669626;19958141;20407809;27862469", "class_list": "", "function": "Methyltransferase involved in the biosynthesis of methylsalicylate in response to stresses. Utilizes salicylic acid (SA) more efficiently than benzoic acid (BA). Can also use anthranilic acid and m-hydroxybenzoic acid as substrate., [UniProtKB, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9CAX9", "ec_number_list": [ { "id": "2.1.1.273", "url": "https://www.rhea-db.org/rhea/?query=ec:2.1.1.273", "type": "external" }, { "id": "2.1.1.274", "url": "https://www.rhea-db.org/rhea/?query=ec:2.1.1.274", "type": "external" } ], "go_molecular_function": "GO:0046872 metal ion binding;GO:0008757 S-adenosylmethionine-dependent methyltransferase activity;GO:0052624 2-phytyl-1,4-naphthoquinone methyltransferase activity;GO:0080150 S-adenosyl-L-methionine:benzoic acid carboxyl methyl transferase activity", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0051707 response to other organism;GO:0006952 defense response;GO:0009611 response to wounding;GO:0032259 methylation", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q6XMI3-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q7XJE6-1", "uniprot_id": [ { "id": "MCA1_ARATH", "url": "https://www.uniprot.org/uniprot/Q7XJE6", "type": "external" } ], "mass": 39792.0, "length": 367, "protein_name": "Metacaspase-1", "gene_name": "AMC1", "organism": "Arabidopsis", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "AMC1; LOL3; MCP1B; T7I23.17", "gene_names_refseq": "", "protein_names_uniprotkb": "Metacaspase-1; 3.4.22.-; AtMC1; AtMCP1b; Metacaspase 1b; Protein LSD ONE LIKE 3", "protein_names_refseq": "", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G02170)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "11130712;15326173;15691845;20565583;21097903;27862469", "class_list": "", "function": "Cysteine protease that cleaves specifically after arginine or lysine residues. Does not cleave caspase-specific substrates. Acts as a positive regulator of cell death. Required for both oxidative stress cell death response and hypersensitive cell death response mediated by immune response., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O81911", "ec_number_list": [], "go_molecular_function": "GO:0004197 cysteine-type endopeptidase activity", "go_cellular_component": "GO:0005737 cytoplasm", "go_biological_process": "GO:0006508 proteolysis;GO:0006952 defense response;GO:0043068 positive regulation of programmed cell death", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q7XJE6-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q7Y1C4-1", "uniprot_id": [ { "id": "BRC2B_ARATH", "url": "https://www.uniprot.org/uniprot/Q7Y1C4", "type": "external" } ], "mass": 127255.0, "length": 1155, "protein_name": "Protein BREAST CANCER SUSCEPTIBILITY 2 homolog B", "gene_name": "BRCA2B", "organism": "Arabidopsis", "refseq_name": "BRCA2-like B", "refseq_ac": [ { "id": "NP_195783", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_195783", "type": "external" } ], "gene_names_uniprotkb": "BRCA2B; BRCA2(V); F7A7.150", "gene_names_refseq": "ATBRCA2(V); BRCA2(V); BRCA2-like B; BRCA2B; F7A7.150; F7A7_150", "protein_names_uniprotkb": "Protein BREAST CANCER SUSCEPTIBILITY 2 homolog B; AtBRCA2B", "protein_names_refseq": "BRCA2-like B", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G01630)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "11130714;14593172;15014444;16415210;22039535;22074104;22077663;23111157;27862469", "class_list": "", "function": "Involved in double-strand break repair and/or homologous recombination by mediating RAD51- and DMC1-facilitated DNA repair. Plays an essential role in both somatic and meiotic homologous recombination. Is crucial for the formation of RAD51 and DMC1 foci during male meiotic homologous recombination in prophase I., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 3, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q84W87;Q9M013", "ec_number_list": [], "go_molecular_function": "GO:0003697 single-stranded DNA binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005739 mitochondrion", "go_biological_process": "GO:0006355 regulation of DNA-templated transcription;GO:0000724 double-strand break repair via homologous recombination;GO:0051321 meiotic cell cycle", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "Q7Y1C4-1", "record_type": "protein", "filter_code": "0000000.0000101.010000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q84M91-1", "uniprot_id": [ { "id": "TANB_ARATH", "url": "https://www.uniprot.org/uniprot/Q84M91", "type": "external" } ], "mass": 49524.0, "length": 444, "protein_name": "Probable microtubule-binding protein TANGLED", "gene_name": "TAN", "organism": "Arabidopsis", "refseq_name": "cyclin family", "refseq_ac": [ { "id": "NP_187184", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_187184", "type": "external" } ], "gene_names_uniprotkb": "TAN; ATN; T12H1.30", "gene_names_refseq": "A. THALIANA TAN1; ATN; ATTAN; T12H1.30; T12H1_30; TANGLED", "protein_names_uniprotkb": "Probable microtubule-binding protein TANGLED; AtTAN", "protein_names_refseq": "cyclin family", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G05330)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "11130713;14593172;18463617;20466843;23572148;25561503;27862469", "class_list": "", "function": "Is required for spatial control cell division during plant development. Through an association with microtubules, acts both for the positioning of cytoskeletal arrays that establish planes of cell division during prophase and for spatial guidance of expanding phragmoplasts toward preestablished cortical division sites (CDS) during cytokinesis (By similarity)., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 7, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9MA86", "ec_number_list": [], "go_molecular_function": "GO:0008017 microtubule binding", "go_cellular_component": "GO:0005730 nucleolus;GO:0005739 mitochondrion;GO:0005829 cytosol;GO:0005875 microtubule associated complex;GO:0009524 phragmoplast", "go_biological_process": "GO:0000911 cytokinesis by cell plate formation;GO:0000914 phragmoplast assembly;GO:2000694 regulation of phragmoplast microtubule organization", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q84M91-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q84MD6-1", "uniprot_id": [ { "id": "DSP2_ARATH", "url": "https://www.uniprot.org/uniprot/Q84MD6", "type": "external" } ], "mass": 29159.0, "length": 257, "protein_name": "Inositol diphosphatase DSP2", "gene_name": "DSP2", "organism": "Arabidopsis", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "DSP2", "gene_names_refseq": "", "protein_names_uniprotkb": "Inositol diphosphatase DSP2; 3.6.1.52; AtPFA-DSP2; Inositol pyrophosphate phosphatase DSP2; Protein PLANT AND FUNGI ATYPICAL DUAL-SPECIFICITY PHOSPHATASE 2", "protein_names_refseq": "", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G32960)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "10617197;14593172;17976645;21409566;27862469;35640071", "class_list": "", "function": "Cleaves the beta-phosphate at the 5-position of soluble inositol pyrophosphates (PubMed:35640071). Has highest activity on 5-diphosphoinositol 1,2,3,4,6-pentakisphosphate (5-InsP(7)), 1,5-bis-diphosphoinositol 2,3,4,6-tetrakisphosphate (1,5-InsP(8)) and 3,5-InsP(8) (PubMed:35640071). Possesses phosphotyrosine phosphatase activity in vitro (PubMed:21409566). Dephosphorylates the phosphoinositides PI(3,5)P2 (PubMed:21409566). Hydrolyzes para-nitrophenyl phosphate and O-methylfluorescein phosphate in vitro (PubMed:17976645, PubMed:21409566)., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O48769", "ec_number_list": [ { "id": "3.6.1.52", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.1.52", "type": "external" } ], "go_molecular_function": "GO:0052845 inositol-5-diphosphate-1,2,3,4,6-pentakisphosphate diphosphatase activity;GO:0052847 inositol-1,5-bisdiphosphate-2,3,4,6-tetrakisphosphate 5-diphosphatase activity;GO:0052848 inositol-3,5-bisdiphosphate-2,3,4,6-tetrakisphosphate 5-diphosphatase activity;GO:0042802 identical protein binding;GO:0016791 phosphatase activity", "go_cellular_component": "GO:0005737 cytoplasm", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q84MD6-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q84Y18-1", "uniprot_id": [ { "id": "CXIP4_ARATH", "url": "https://www.uniprot.org/uniprot/Q84Y18", "type": "external" } ], "mass": 37832.0, "length": 332, "protein_name": "CAX-interacting protein 4", "gene_name": "CXIP4", "organism": "Arabidopsis", "refseq_name": "CAX interacting protein 4", "refseq_ac": [ { "id": "NP_001323648", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001323648", "type": "external" } ], "gene_names_uniprotkb": "CXIP4; F8N16.20", "gene_names_refseq": "CAX interacting protein 4; CXIP4; F8N16.20; F8N16_20", "protein_names_uniprotkb": "CAX-interacting protein 4", "protein_names_refseq": "CAX interacting protein 4", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G28910)", "pathway_count": 1, "publication_count": 14, "publication_id_list": "10617197;12480930;14593172;14960315;18463617;19376835;20466843;22060019;23111157;23328941;23660473;23776212;25561503;27862469", "class_list": "", "function": "May regulate CAX1 cation transporter., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 8, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q8L8W3;Q9ZV23", "ec_number_list": [], "go_molecular_function": "GO:0008270 zinc ion binding;GO:0003676 nucleic acid binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 1.5, "record_id": "Q84Y18-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q852U6-1", "uniprot_id": [ { "id": "RHY1A_ARATH", "url": "https://www.uniprot.org/uniprot/Q852U6", "type": "external" } ], "mass": 28447.0, "length": 250, "protein_name": "Probable E3 ubiquitin-protein ligase RHY1A", "gene_name": "RHY1A", "organism": "Arabidopsis", "refseq_name": "RING/U-box superfamily protein", "refseq_ac": [ { "id": "NP_564556", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_564556", "type": "external" } ], "gene_names_uniprotkb": "RHY1A; F10F5.8", "gene_names_refseq": "F10F5.8; F10F5_8", "protein_names_uniprotkb": "Probable E3 ubiquitin-protein ligase RHY1A; 2.3.2.27; RING-H2 finger Y1a; RING-H2 zinc finger protein RHY1a; RING-type E3 ubiquitin transferase RHY1A", "protein_names_refseq": "RING/U-box superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G49850)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "11130712;14593172;27862469;9781696", "class_list": "", "function": "Probable E3 ubiquitin-protein ligase that may possess E3 ubiquitin ligase activity in vitro., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q8LD21;Q9C6C9;Q9ZT39", "ec_number_list": [], "go_molecular_function": "GO:0008270 zinc ion binding;GO:0061630 ubiquitin protein ligase activity", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0016567 protein ubiquitination;GO:0006511 ubiquitin-dependent protein catabolic process", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "Q852U6-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8GTY0-1", "uniprot_id": [ { "id": "EF1A4_ARATH", "url": "https://www.uniprot.org/uniprot/Q8GTY0", "type": "external" } ], "mass": 49502.0, "length": 449, "protein_name": "Elongation factor 1-alpha 4", "gene_name": "A4", "organism": "Arabidopsis", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "A4; EF1A; MUF9.4", "gene_names_refseq": "", "protein_names_uniprotkb": "Elongation factor 1-alpha 4; EF-1-alpha 4; eEF-1A4", "protein_names_refseq": "", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G07920); (ath:AT1G07930); (ath:AT1G07940); (ath:AT5G60390)", "pathway_count": 4, "publication_count": 8, "publication_id_list": "14593172;17272265;19245862;19292762;2101309;21245040;27862469;9679202", "class_list": "", "function": "This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "P13905;Q0WSD5;Q39093;Q9C5L4", "ec_number_list": [], "go_molecular_function": "GO:0003729 mRNA binding;GO:0003924 GTPase activity;GO:0005525 GTP binding;GO:0003746 translation elongation factor activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005739 mitochondrion;GO:0005886 plasma membrane;GO:0048471 perinuclear region of cytoplasm", "go_biological_process": "GO:0006412 translation;GO:0006414 translational elongation", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "Q8GTY0-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8GWP0-1", "uniprot_id": [ { "id": "MYB39_ARATH", "url": "https://www.uniprot.org/uniprot/Q8GWP0", "type": "external" } ], "mass": 40023.0, "length": 360, "protein_name": "Transcription factor MYB39", "gene_name": "MYB39", "organism": "Arabidopsis", "refseq_name": "myb domain protein 39", "refseq_ac": [ { "id": "NP_001329227", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001329227", "type": "external" } ], "gene_names_uniprotkb": "MYB39; FCA0; dl4925c", "gene_names_refseq": "MYB39; myb domain protein 39", "protein_names_uniprotkb": "Transcription factor MYB39; AtMYB39; Myb-related protein 39", "protein_names_refseq": "myb domain protein 39", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G17785)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "10617198;11597504;11910074;14593172;16463103;27862469;9461215", "class_list": "", "function": "", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O23618;Q9SPG8", "ec_number_list": [], "go_molecular_function": "GO:0003677 DNA binding;GO:0003700 DNA-binding transcription factor activity", "go_cellular_component": "GO:0005634 nucleus;GO:0048226 Casparian strip", "go_biological_process": "GO:0045893 positive regulation of DNA-templated transcription;GO:0010345 suberin biosynthetic process;GO:2000762 regulation of phenylpropanoid metabolic process", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q8GWP0-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8GZ13-1", "uniprot_id": [ { "id": "BEE1_ARATH", "url": "https://www.uniprot.org/uniprot/Q8GZ13", "type": "external" } ], "mass": 29364.0, "length": 260, "protein_name": "Transcription factor BEE 1", "gene_name": "BEE1", "organism": "Arabidopsis", "refseq_name": "BR enhanced expression 1", "refseq_ac": [ { "id": "NP_173276", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_173276", "type": "external" } ], "gene_names_uniprotkb": "BEE1; BHLH44; EN77; F15H18.11; F15H18.16", "gene_names_refseq": "BEE1; BR enhanced expression 1; F15H18.11; F15H18_11", "protein_names_uniprotkb": "Transcription factor BEE 1; AtbHLH44; Basic helix-loop-helix protein 44; Protein Brassinosteroid enhanced expression 1; Transcription factor EN 77; bHLH 44; bHLH transcription factor bHLH044", "protein_names_refseq": "BR enhanced expression 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G18400)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "11130712;11910074;12454087;12679534;12897250;14593172;14600211;27862469", "class_list": "", "function": "Positive regulator of brassinosteroid signaling., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9LPQ6", "ec_number_list": [], "go_molecular_function": "GO:0003677 DNA binding;GO:0003700 DNA-binding transcription factor activity;GO:0046983 protein dimerization activity", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006355 regulation of DNA-templated transcription;GO:2000762 regulation of phenylpropanoid metabolic process;GO:1902448 positive regulation of shade avoidance", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "Q8GZ13-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8H133-1", "uniprot_id": [ { "id": "PLP8_ARATH", "url": "https://www.uniprot.org/uniprot/Q8H133", "type": "external" } ], "mass": 56961.0, "length": 525, "protein_name": "Patatin-like protein 8", "gene_name": "PLP8", "organism": "Arabidopsis", "refseq_name": "PATATIN-like protein 8", "refseq_ac": [ { "id": "NP_001190866", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001190866", "type": "external" } ], "gene_names_uniprotkb": "PLP8; F27B13.40", "gene_names_refseq": "F27B13.40; F27B13_40; PATATIN-like protein 8; PLA IVD; PLP8", "protein_names_uniprotkb": "Patatin-like protein 8; 3.1.1.-; AtPLAIVD; AtPLP8; Patatin-related phospholipase A IIIgamma; Phospholipase A IVD; pPLAIIIg", "protein_names_refseq": "PATATIN-like protein 8", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G29800)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "10617198;14593172;14993207;21447788;23111157;27862469", "class_list": "", "function": "Possesses non-specific lipolytic acyl hydrolase (LAH) activity. Hydrolyzes phospholipids as well as galactolipids. May play a role in disease resistance (By similarity)., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9SZQ3", "ec_number_list": [], "go_molecular_function": "GO:0016787 hydrolase activity", "go_cellular_component": "", "go_biological_process": "GO:0006952 defense response;GO:0016042 lipid catabolic process", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q8H133-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8H1U5-1", "uniprot_id": [ { "id": "APC2_ARATH", "url": "https://www.uniprot.org/uniprot/Q8H1U5", "type": "external" } ], "mass": 97791.0, "length": 865, "protein_name": "Anaphase-promoting complex subunit 2", "gene_name": "APC2", "organism": "Arabidopsis", "refseq_name": "anaphase-promoting complex/cyclosome 2", "refseq_ac": [ { "id": "NP_178543", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_178543", "type": "external" } ], "gene_names_uniprotkb": "APC2; F28I8.30", "gene_names_refseq": "APC2; F28I8.30; F28I8_30; anaphase-promoting complex/cyclosome 2", "protein_names_uniprotkb": "Anaphase-promoting complex subunit 2; Cyclosome subunit 2", "protein_names_refseq": "anaphase-promoting complex/cyclosome 2", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G04660)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "10617197;11910074;14508008;14593172;17944809;27862469", "class_list": "", "function": "Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin-protein ligase complex that controls progression through mitosis and the G1 phase of the cell cycle. The APC/C complex controls several key steps in the cell cycle by mediating ubiquitination and subsequent degradation of target proteins such as cyclins. The APC/C complex is required for the female gametophyte development and is involved in several aspect of development by controlling cell division and cell elongation. Involved in the control of endoreduplication., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q8GX39;Q9SJ93", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005634 nucleus;GO:0005819 spindle;GO:0005680 anaphase-promoting complex;GO:0000151 ubiquitin ligase complex", "go_biological_process": "GO:0051301 cell division;GO:0070979 protein K11-linked ubiquitination;GO:0006511 ubiquitin-dependent protein catabolic process;GO:0007091 metaphase/anaphase transition of mitotic cell cycle;GO:0009561 megagametogenesis", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q8H1U5-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8L5Y6-1", "uniprot_id": [ { "id": "CAND1_ARATH", "url": "https://www.uniprot.org/uniprot/Q8L5Y6", "type": "external" } ], "mass": 134897.0, "length": 1219, "protein_name": "Cullin-associated NEDD8-dissociated protein 1", "gene_name": "CAND1", "organism": "Arabidopsis", "refseq_name": "cullin-associated and neddylation dissociated", "refseq_ac": [ { "id": "NP_001030954", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001030954", "type": "external" } ], "gene_names_uniprotkb": "CAND1; ETA2; HVE; T8K22.14", "gene_names_refseq": "ATCAND1; CAND1; CULLIN-ASSOCIATED AND NEDDYLATION DISSOCIATED 1; ETA2; HEMIVENATA; HVE; T8K22.14; T8K22_14; TIP120; cullin-associated and neddylation dissociated", "protein_names_uniprotkb": "Cullin-associated NEDD8-dissociated protein 1; AtCAND1; Cullin-associated and neddylation-dissociated protein 1; Protein ENHANCER OF TIR1-1 AUXIN RESISTANCE 2; Protein HEMIVENATA", "protein_names_refseq": "cullin-associated and neddylation dissociated", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G02560)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "10617197;14593172;15181201;15208391;15208392;16844902;16943276;18550827;22223895;27862469", "class_list": "", "function": "Key assembly factor of SCF (SKP1-CUL1-F-box protein) E3 ubiquitin ligase complexes that promotes the exchange of the substrate-recognition F-box subunit in SCF complexes, thereby playing a key role in the cellular repertoire of SCF complexes. Acts as a F-box protein exchange factor (By similarity). Required for SCF(TIR1) function. Modulates SCF(TIR1) function through its interactions with the CUL1 subunit. Represses photomorphogenesis by promoting HY5 degradation in darkness., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O64720", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005634 nucleus;GO:0005886 plasma membrane;GO:0009505 plant-type cell wall", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0016567 protein ubiquitination;GO:0010265 SCF complex assembly;GO:0009733 response to auxin;GO:0010051 xylem and phloem pattern formation", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "Q8L5Y6-1", "record_type": "protein", "filter_code": "0000000.0100101.010000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8L7L8-1", "uniprot_id": [ { "id": "TRP1_ARATH", "url": "https://www.uniprot.org/uniprot/Q8L7L8", "type": "external" } ], "mass": 65036.0, "length": 578, "protein_name": "Telomere repeat-binding protein 1", "gene_name": "TRP1", "organism": "Arabidopsis", "refseq_name": "telomeric repeat binding protein 1", "refseq_ac": [ { "id": "NP_001078770", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001078770", "type": "external" } ], "gene_names_uniprotkb": "TRP1; F2O15.20", "gene_names_refseq": "ATTRP1; F2O15.20; F2O15_20; TELOMERE REPEAT BINDING PROTEIN 1; TRP1; telomeric repeat binding protein 1", "protein_names_uniprotkb": "Telomere repeat-binding protein 1; AtTRP1", "protein_names_refseq": "telomeric repeat binding protein 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G59430)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "11278537;14593172;15364931;15589838;15688221;16337232;16463103;19423640;27862469", "class_list": "", "function": "Binds specifically to the plant telomeric double-stranded DNA sequences 5'-GGTTTAG-3'. At least 4 repeats of telomeric sequences are required for binding. Induces DNA bending., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A8MQF8;A8MQM5;B9DFI1;C0Z2L6;Q9LTI6;Q9XGN0", "ec_number_list": [], "go_molecular_function": "GO:0003691 double-stranded telomeric DNA binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005886 plasma membrane;GO:0016020 membrane;GO:0031965 nuclear membrane", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0009873 ethylene-activated signaling pathway", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "Q8L7L8-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8L7W1-1", "uniprot_id": [ { "id": "MSL3_ARATH", "url": "https://www.uniprot.org/uniprot/Q8L7W1", "type": "external" } ], "mass": 74189.0, "length": 678, "protein_name": "Mechanosensitive ion channel protein 3, chloroplastic", "gene_name": "MSL3", "organism": "Arabidopsis", "refseq_name": "MSCS-like 3", "refseq_ac": [ { "id": "NP_176116", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_176116", "type": "external" } ], "gene_names_uniprotkb": "MSL3; F16M22.2; T18I24.11", "gene_names_refseq": "F16M22.2; F16M22_2; MSCS-like 3; MSL3", "protein_names_uniprotkb": "Mechanosensitive ion channel protein 3, chloroplastic; Mechanosensitive channel of small conductance-like 3; MscS-Like protein 3", "protein_names_refseq": "MSCS-like 3", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G58200)", "pathway_count": 1, "publication_count": 15, "publication_id_list": "11130712;12626684;14593172;16401419;18463617;19376835;20466843;21768351;21810996;23111157;23572148;23776212;27862469;28011693;30833711", "class_list": "", "function": "Mechanosensitive channel that opens in response to stretch forces in the membrane lipid bilayer. Controls plastid size, shape, and perhaps division during normal plant development by altering ion flux in response to changes in membrane tension. Acts as a component of the chloroplast division machinery., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9C6R0;Q9C731", "ec_number_list": [], "go_molecular_function": "GO:0005216 monoatomic ion channel activity", "go_cellular_component": "GO:0005886 plasma membrane;GO:0009526 plastid envelope;GO:0031969 chloroplast membrane", "go_biological_process": "GO:0071470 cellular response to osmotic stress;GO:0010020 chloroplast fission", "synthesized_glycan_count": 0, "hit_score": 1.6, "record_id": "Q8L7W1-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8L8A6-1", "uniprot_id": [ { "id": "GRF5_ARATH", "url": "https://www.uniprot.org/uniprot/Q8L8A6", "type": "external" } ], "mass": 44696.0, "length": 397, "protein_name": "Growth-regulating factor 5", "gene_name": "GRF5", "organism": "Arabidopsis", "refseq_name": "growth-regulating factor 5", "refseq_ac": [ { "id": "NP_188012", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_188012", "type": "external" } ], "gene_names_uniprotkb": "GRF5; MDC16.8", "gene_names_refseq": "AtGRF5; GRF5; growth-regulating factor 5", "protein_names_uniprotkb": "Growth-regulating factor 5; AtGRF5; Transcription activator GRF5", "protein_names_refseq": "growth-regulating factor 5", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G13960)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "10819329;12974814;15326298;15960617;20023165;27862469", "class_list": "", "function": "Transcription activator that plays a role in the regulation of cell expansion in leaf and cotyledons tissues. Acts together with GIF1 for the development of appropriate leaf size and shape through the promotion and/or maintenance of cell proliferation activity in leaf primordia., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "C0SVA9;Q9LVK4", "ec_number_list": [], "go_molecular_function": "GO:0005524 ATP binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0009409 response to cold;GO:0006355 regulation of DNA-templated transcription;GO:0009739 response to gibberellin;GO:0048366 leaf development", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q8L8A6-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8LA53-1", "uniprot_id": [ { "id": "MBD2_ARATH", "url": "https://www.uniprot.org/uniprot/Q8LA53", "type": "external" } ], "mass": 30767.0, "length": 272, "protein_name": "Methyl-CpG-binding domain-containing protein 2", "gene_name": "MBD2", "organism": "Arabidopsis", "refseq_name": "methyl-CPG-binding domain protein 02", "refseq_ac": [ { "id": "NP_001190421", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001190421", "type": "external" } ], "gene_names_uniprotkb": "MBD2; T26D22.18", "gene_names_refseq": "ATMBD2; MBD02; MBD2; METHYL-CPG-BINDING DOMAIN PROTEIN 2; T26D22.18; T26D22_18; methyl-CPG-binding domain protein 02", "protein_names_uniprotkb": "Methyl-CpG-binding domain-containing protein 2; AtMBD2; MBD02; Methyl-CpG-binding protein MBD2", "protein_names_refseq": "methyl-CPG-binding domain protein 02", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G35330)", "pathway_count": 1, "publication_count": 21, "publication_id_list": "11130714;12954765;14593172;14605234;15010609;15805479;15888682;17208509;18463617;19376835;20466843;21768351;22438062;23660473;23776212;25561503;26091701;27862469;28011693;29167316;30833711", "class_list": "", "function": "Probable transcriptional regulator., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 6, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O65234;Q0WRD3;Q84TJ8;Q9FZP7", "ec_number_list": [], "go_molecular_function": "GO:0003677 DNA binding;GO:0008270 zinc ion binding;GO:0019899 enzyme binding", "go_cellular_component": "GO:0005634 nucleus;GO:0000118 histone deacetylase complex;GO:0016581 NuRD complex", "go_biological_process": "GO:0006338 chromatin remodeling;GO:0006351 DNA-templated transcription", "synthesized_glycan_count": 0, "hit_score": 2.2, "record_id": "Q8LA53-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8LAJ7-1", "uniprot_id": [ { "id": "PHL3_ARATH", "url": "https://www.uniprot.org/uniprot/Q8LAJ7", "type": "external" } ], "mass": 31723.0, "length": 292, "protein_name": "Protein PHR1-LIKE 3", "gene_name": "PHL3", "organism": "Arabidopsis", "refseq_name": "Homeodomain-like superfamily protein", "refseq_ac": [ { "id": "NP_001031626", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001031626", "type": "external" } ], "gene_names_uniprotkb": "PHL3; F18A5.30; UNE16", "gene_names_refseq": "F18A5.30; F18A5_30; UNE16; unfertilized embryo sac 16", "protein_names_uniprotkb": "Protein PHR1-LIKE 3; Myb family transcription factor PHL3; Protein UNFERTILIZED EMBRYO SAC 16", "protein_names_refseq": "Homeodomain-like superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G13640)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "10617198;11511543;14593172;15634699;24309816;26586833;27862469", "class_list": "", "function": "Transcriptional activator (PubMed:26586833). Probable component of the central regulatory system controlling transcriptional responses to Pi starvation (PubMed:26586833). Binds in a sequence-specific manner to phosphate starvation-regulated promoters (PubMed:26586833). Required for female gametophyte development and function (PubMed:15634699)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "F4JTR5;Q8RXE4;Q9SVP8", "ec_number_list": [], "go_molecular_function": "GO:0003700 DNA-binding transcription factor activity;GO:0043565 sequence-specific DNA binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0010628 positive regulation of gene expression;GO:0010468 regulation of gene expression;GO:0009567 double fertilization forming a zygote and endosperm", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q8LAJ7-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8LAW2-1", "uniprot_id": [ { "id": "AFR_ARATH", "url": "https://www.uniprot.org/uniprot/Q8LAW2", "type": "external" } ], "mass": 41278.0, "length": 372, "protein_name": "F-box protein AFR", "gene_name": "AFR", "organism": "Arabidopsis", "refseq_name": "Galactose oxidase/kelch repeat superfamily protein", "refseq_ac": [ { "id": "NP_565572", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_565572", "type": "external" } ], "gene_names_uniprotkb": "AFR; F25P17.16; SKIP29", "gene_names_refseq": "AFR; ATTENUATED FAR-RED RESPONSE; F25P17.16; F25P17_16", "protein_names_uniprotkb": "F-box protein AFR; Protein ATTENUATED FAR-RED RESPONSE; SKP1-interacting partner 29", "protein_names_refseq": "Galactose oxidase/kelch repeat superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G24540)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "10617197;11118138;12795696;14593172;14653999;27862469", "class_list": "", "function": "Component of SCF (ASK-cullin-F-box) E3 ubiquitin ligase complexes, which may mediate the ubiquitination and subsequent proteasomal degradation of target proteins (By similarity). Part of the phyA-mediated signaling transduction pathway leading to the regulation of gene expression and hypocotyls elongation in response to red and far-red light exposure., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9SJB1", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005737 cytoplasm", "go_biological_process": "GO:0016567 protein ubiquitination;GO:0009585 red, far-red light phototransduction;GO:0010017 red or far-red light signaling pathway", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q8LAW2-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8LBK6-1", "uniprot_id": [ { "id": "GRS15_ARATH", "url": "https://www.uniprot.org/uniprot/Q8LBK6", "type": "external" } ], "mass": 18734.0, "length": 169, "protein_name": "Monothiol glutaredoxin-S15, mitochondrial", "gene_name": "GRXS15", "organism": "Arabidopsis", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "GRXS15; MSJ11.6", "gene_names_refseq": "", "protein_names_uniprotkb": "Monothiol glutaredoxin-S15, mitochondrial; AtGrxS15", "protein_names_refseq": "", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G15660)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "10819329;12954611;14593172;15170506;16720602;19423640;24203231;27862469", "class_list": "", "function": "May only reduce GSH-thiol disulfides, but not protein disulfides. Participates probably to the maturation of iron-sulfur proteins and to the regulation of the redox state of the BOLA proteins., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "B9DGX1;Q9LW13", "ec_number_list": [], "go_molecular_function": "GO:0015036 disulfide oxidoreductase activity;GO:0046872 metal ion binding;GO:0051537 2 iron, 2 sulfur cluster binding", "go_cellular_component": "GO:0005739 mitochondrion;GO:0005759 mitochondrial matrix;GO:0005829 cytosol", "go_biological_process": "GO:0009249 protein lipoylation", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "Q8LBK6-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8LDP4-1", "uniprot_id": [ { "id": "CP19D_ARATH", "url": "https://www.uniprot.org/uniprot/Q8LDP4", "type": "external" } ], "mass": 21534.0, "length": 201, "protein_name": "Peptidyl-prolyl cis-trans isomerase CYP19-4", "gene_name": "CYP19-4", "organism": "Arabidopsis", "refseq_name": "cyclophilin 5", "refseq_ac": [ { "id": "NP_001077978", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001077978", "type": "external" } ], "gene_names_uniprotkb": "CYP19-4; CYP5; F23F1.12", "gene_names_refseq": "ARABIDOPSIS THALIANA CYCLOPHILIN 5; ATCYP5; CYCLOPHILIN 19-4; CYP19-4; CYP5; F23F1.12; F23F1_12; cyclophilin 5", "protein_names_uniprotkb": "Peptidyl-prolyl cis-trans isomerase CYP19-4; 5.2.1.8; Cyclophilin of 19 kDa 4; Cyclophilin-5; PPIase CYP19-4; Rotamase CYP19-4", "protein_names_refseq": "cyclophilin 5", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G29960)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "10189705;10617197;10715321;14593172;15047905;15051864;27862469", "class_list": "", "function": "PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides. May be involved during embryogenesis and organ development by regulating the folding of EMB30/GNOM, and thus, by modulating its activity., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A8MS66;O22515;O80876", "ec_number_list": [ { "id": "5.2.1.8", "url": "https://www.rhea-db.org/rhea/?query=ec:5.2.1.8", "type": "external" }, { "id": "2.3.2.27", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.2.27", "type": "external" } ], "go_molecular_function": "GO:0016018 cyclosporin A binding;GO:0003755 peptidyl-prolyl cis-trans isomerase activity", "go_cellular_component": "GO:0099503 secretory vesicle;GO:0005576 extracellular region;GO:0005737 cytoplasm;GO:0005777 peroxisome;GO:0005783 endoplasmic reticulum", "go_biological_process": "GO:0006457 protein folding;GO:0061083 regulation of protein refolding", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q8LDP4-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8LG05-1", "uniprot_id": [ { "id": "STKLM_ARATH", "url": "https://www.uniprot.org/uniprot/Q8LG05", "type": "external" } ], "mass": 38186.0, "length": 345, "protein_name": "Transcription factor STKL1", "gene_name": "STKL1", "organism": "Arabidopsis", "refseq_name": "DNA-binding storekeeper protein-related transcriptional regulator", "refseq_ac": [ { "id": "NP_567159", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_567159", "type": "external" } ], "gene_names_uniprotkb": "STKL1; F5I10", "gene_names_refseq": "", "protein_names_uniprotkb": "Transcription factor STKL1; Protein Storekeeper-like 1", "protein_names_refseq": "DNA-binding storekeeper protein-related transcriptional regulator", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G00238)", "pathway_count": 1, "publication_count": 19, "publication_id_list": "10617198;11910074;14593172;18463617;19376835;20466843;21768351;23111157;23328941;23660473;23776212;25561503;26091701;26187819;27031427;27862469;28011693;29654922;30833711", "class_list": "", "function": "Transcription repressor that binds DNA in a sequence-specific manner, 5'-GCCT-3', to regulate the expression of PGR. Acts as a modulatory component for the glucose-triggered developmental leaf growth process., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 13, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0000976 transcription cis-regulatory region binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005730 nucleolus;GO:0009507 chloroplast", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0010629 negative regulation of gene expression;GO:0071333 cellular response to glucose stimulus;GO:0006355 regulation of DNA-templated transcription", "synthesized_glycan_count": 0, "hit_score": 2.0, "record_id": "Q8LG05-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8LGS1-1", "uniprot_id": [ { "id": "MARD1_ARATH", "url": "https://www.uniprot.org/uniprot/Q8LGS1", "type": "external" } ], "mass": 29534.0, "length": 263, "protein_name": "Protein MARD1", "gene_name": "MARD1", "organism": "Arabidopsis", "refseq_name": "mediator of aba-regulated dormancy protein (DUF581)", "refseq_ac": [ { "id": "NP_567143", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_567143", "type": "external" } ], "gene_names_uniprotkb": "MARD1; DUF581-19; F16M2.6; FLZ9; SAG102", "gene_names_refseq": "MARD1; MEDIATOR OF ABA-REGULATED DORMANCY 1", "protein_names_uniprotkb": "Protein MARD1; FCS-Like Zinc finger 9; Mediator of ABA-regulated dormancy1; Senescence-associated protein SAG102", "protein_names_refseq": "mediator of aba-regulated dormancy protein (DUF581)", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G63210)", "pathway_count": 1, "publication_count": 12, "publication_id_list": "11130713;11402199;14593172;15159630;23616605;24600465;24901469;25544057;26442059;26978070;27862469;29945970", "class_list": "", "function": "May act as an adapter to facilitate the interaction of SnRK1 complex with effector proteins, conferring tissue- and stimulus-type specific differences in the SnRK1 regulation pathway (PubMed:24600465). 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T9H9.24", "gene_names_refseq": "T9H9.24; T9H9_24", "protein_names_uniprotkb": "B3 domain-containing protein At2g31720; Protein AUXIN RESPONSE FACTOR 70", "protein_names_refseq": "B3 domain protein (DUF313)", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G31720)", "pathway_count": 1, "publication_count": 3, "publication_id_list": "10617197;18986826;27862469", "class_list": "", "function": "", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0003677 DNA binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "Q8RV83-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8RWD0-1", "uniprot_id": [ { "id": "COL16_ARATH", "url": "https://www.uniprot.org/uniprot/Q8RWD0", "type": "external" } ], "mass": 46932.0, "length": 417, "protein_name": "Zinc finger protein CONSTANS-LIKE 16", "gene_name": "COL16", "organism": "Arabidopsis", "refseq_name": "B-box type zinc finger protein with CCT domain-containing protein", "refseq_ac": [ { "id": "NP_173915", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_173915", "type": "external" } ], "gene_names_uniprotkb": "COL16; F2J7.10", "gene_names_refseq": "B-box domain protein 15; BBX15; F2J7.10; F2J7_10", "protein_names_uniprotkb": "Zinc finger protein CONSTANS-LIKE 16", "protein_names_refseq": "B-box type zinc finger protein with CCT domain-containing protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G25440)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "11130712;12692345;14593172;27862469", "class_list": "", "function": "", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9C6L4", "ec_number_list": [], "go_molecular_function": "GO:0003700 DNA-binding transcription factor activity;GO:0008270 zinc ion binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006355 regulation of DNA-templated transcription", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "Q8RWD0-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8RWQ8-1", "uniprot_id": [ { "id": "FBX14_ARATH", "url": "https://www.uniprot.org/uniprot/Q8RWQ8", "type": "external" } ], "mass": 69500.0, "length": 623, "protein_name": "F-box protein FBX14", "gene_name": "FBX14", "organism": "Arabidopsis", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "FBX14; T22A6.220", "gene_names_refseq": "", "protein_names_uniprotkb": "F-box protein FBX14; TIR1-like protein; Transport inhibitor response 1-like protein", "protein_names_refseq": "", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G24390)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "10617198;11077244;12008900;14593172;19423640;27862469", "class_list": "", "function": "", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "B9DFR4;Q9STV5", "ec_number_list": [], "go_molecular_function": "GO:0000822 inositol hexakisphosphate binding;GO:0010011 auxin binding;GO:0038198 auxin receptor activity", "go_cellular_component": "GO:0005634 nucleus;GO:0019005 SCF ubiquitin ligase complex", "go_biological_process": "GO:0016567 protein ubiquitination;GO:0006511 ubiquitin-dependent protein catabolic process;GO:0031146 SCF-dependent proteasomal ubiquitin-dependent protein catabolic process;GO:0009733 response to auxin;GO:0009734 auxin-activated signaling pathway", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q8RWQ8-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8RX22-1", "uniprot_id": [ { "id": "MIP1_ARATH", "url": "https://www.uniprot.org/uniprot/Q8RX22", "type": "external" } ], "mass": 79328.0, "length": 711, "protein_name": "MND1-interacting protein 1", "gene_name": "MIP1", "organism": "Arabidopsis", "refseq_name": "RING/U-box superfamily protein", "refseq_ac": [ { "id": "NP_174531", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_174531", "type": "external" } ], "gene_names_uniprotkb": "MIP1; F5D14.31; T9G5.5", "gene_names_refseq": "F5D14.34", "protein_names_uniprotkb": "MND1-interacting protein 1; AtMIP1", "protein_names_refseq": "RING/U-box superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G32530)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "11130712;14593172;19187040;23572148;25561503;27862469", "class_list": "", "function": "", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 3, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9C7Y6;Q9LQK4", "ec_number_list": [], "go_molecular_function": "GO:0008270 zinc ion binding", "go_cellular_component": "GO:0005737 cytoplasm", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q8RX22-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8RXD3-1", "uniprot_id": [ { "id": "AIP2_ARATH", "url": "https://www.uniprot.org/uniprot/Q8RXD3", "type": "external" } ], "mass": 34807.0, "length": 310, "protein_name": "E3 ubiquitin-protein ligase AIP2", "gene_name": "AIP2", "organism": "Arabidopsis", "refseq_name": "RING/U-box superfamily protein", "refseq_ac": [ { "id": "NP_197591", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_197591", "type": "external" } ], "gene_names_uniprotkb": "AIP2; F22D1.80", "gene_names_refseq": "ABI3-interacting protein 2; AIP2; F22D1.80; F22D1_80", "protein_names_uniprotkb": "E3 ubiquitin-protein ligase AIP2; 2.3.2.27; ABI3-interacting protein 2; RING-type E3 ubiquitin transferase AIP2", "protein_names_refseq": "RING/U-box superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G20910)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "10743655;11130714;14593172;15644464;15998807;27862469", "class_list": "", "function": "E3 ubiquitin-protein ligase that acts as a negative regulator of abscisic acid (ABA) signaling. Mediates ubiquitination and subsequent proteasomal degradation of the transcription factor ABI3., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 2, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9M4B6", "ec_number_list": [], "go_molecular_function": "GO:0008270 zinc ion binding;GO:0061630 ubiquitin protein ligase activity;GO:0004842 ubiquitin-protein transferase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005829 cytosol", "go_biological_process": "GO:0016567 protein ubiquitination;GO:0006511 ubiquitin-dependent protein catabolic process;GO:0009737 response to abscisic acid;GO:0009738 abscisic acid-activated signaling pathway;GO:0009788 negative regulation of abscisic acid-activated signaling pathway", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q8RXD3-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8RXG3-1", "uniprot_id": [ { "id": "M2K5_ARATH", "url": "https://www.uniprot.org/uniprot/Q8RXG3", "type": "external" } ], "mass": 38329.0, "length": 348, "protein_name": "Mitogen-activated protein kinase kinase 5", "gene_name": "MKK5", "organism": "Arabidopsis", "refseq_name": "MAP kinase kinase 5", "refseq_ac": [ { "id": "NP_001319606", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001319606", "type": "external" } ], "gene_names_uniprotkb": "MKK5; MEK5; MXL8.8", "gene_names_refseq": "ARABIDOPSIS THALIANA MITOGEN-ACTIVATED PROTEIN KINASE KINASE 5; ATMAP2K_ALPHA; ATMEK5; ATMKK5; MAP KINASE KINASE 5; MAP kinase kinase 5; MAP2K_A; MEK5; MKK5", "protein_names_uniprotkb": "Mitogen-activated protein kinase kinase 5; 2.7.12.2; AtMAP2Kalpha; AtMEK5; AtMKK5; MAP kinase kinase 5", "protein_names_refseq": "MAP kinase kinase 5", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G21220)", "pathway_count": 1, "publication_count": 24, "publication_id_list": "10048483;10819329;11687590;11875555;14593172;16537113;17259259;18268539;18809915;19513235;20571112;23111157;23263767;23341468;23677921;24019147;25561503;25731164;25843888;27679653;27862469;27913741;30349547;35866601", "class_list": "", "function": "Mitogen-activated protein kinase kinase (MAPKK) which regulates abscisic acid (ABA) responses in a MAPKKK20-MKK5-MPK6 cascade involved in root growth (e.g. root cell division and elongation) and stomatal response, probably via MAPK6 activation by protein phosphorylation (PubMed:27913741). Involved in the second phase of hydrogen peroxide generation during hypersensitive response-like cell death. Involved in the innate immune MAP kinase signaling cascade (MEKK1, MKK4/MKK5 and MPK3/MPK6) downstream of bacterial flagellin receptor FLS2. Activates by phosphorylation the downstream MPK3 and MPK6. YDA-MKK4/MKK5-MPK3/MPK6 module regulates stomatal cell fate before the guard mother cell (GMC) is specified. This MAPK cascade also functions downstream of the ER receptor in regulating coordinated local cell proliferation, which shapes the morphology of plant organs. MKK4 and MKK5 participate in the regulation of floral organ abscission. Target of the Pseudomonas syringae type III effector HopF2, that inhibits the activation of the downstream MPK6 and PAMP-triggered immunity. Plays a critical role in high light stress tolerance by the mediation of the Cu/Zn SODs CSD1 and CSD2 gene expression. Phosphorylates BZR1 in vitro., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 5, "reported_mutagensis": 10, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O80398;Q96517", "ec_number_list": [ { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.3.2.27", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.2.27", "type": "external" }, { "id": "2.7.10.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.-", "type": "external" }, { "id": "3.1.4.46", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.4.46", "type": "external" }, { "id": "2.7.11.25", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.25", "type": "external" }, { "id": "2.7.10.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.2", "type": "external" }, { "id": "2.7.11.22", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.22", "type": "external" }, { "id": "2.7.10.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.1", "type": "external" }, { "id": "2.7.11.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.-", "type": "external" }, { "id": "2.7.11.24", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.24", "type": "external" }, { "id": "2.7.12.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.1", "type": "external" }, { "id": "2.7.11.23", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.23", "type": "external" }, { "id": "2.7.12.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.2", "type": "external" }, { "id": "2.7.-.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.-.-", "type": "external" }, { "id": "3.1.26.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.26.-", "type": "external" }, { "id": "3.1.3.16", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.16", "type": "external" }, { "id": "2.7.11.34", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.34", "type": "external" }, { "id": "4.6.1.2", "url": "https://www.rhea-db.org/rhea/?query=ec:4.6.1.2", "type": "external" } ], "go_molecular_function": "GO:0004674 protein serine/threonine kinase activity;GO:0004713 protein tyrosine kinase activity;GO:0005524 ATP binding;GO:0004708 MAP kinase kinase activity;GO:0106310 protein serine kinase activity", "go_cellular_component": "GO:0005739 mitochondrion;GO:0010494 cytoplasmic stress granule", "go_biological_process": "GO:0098542 defense response to other organism;GO:0007165 signal transduction;GO:0051301 cell division;GO:0009626 plant-type hypersensitive response;GO:0009738 abscisic acid-activated signaling pathway", "synthesized_glycan_count": 0, "hit_score": 2.5, "record_id": "Q8RXG3-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8S307-1", "uniprot_id": [ { "id": "BZR1_ARATH", "url": "https://www.uniprot.org/uniprot/Q8S307", "type": "external" } ], "mass": 36486.0, "length": 336, "protein_name": "Protein BRASSINAZOLE-RESISTANT 1", "gene_name": "BZR1", "organism": "Arabidopsis", "refseq_name": "Brassinosteroid signaling positive regulator (BZR1) family protein", "refseq_ac": [ { "id": "NP_565099", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_565099", "type": "external" } ], "gene_names_uniprotkb": "BZR1; BIS2; F9E10.7", "gene_names_refseq": "BRASSINAZOLE-RESISTANT 1; BZR1; F9E10.7; F9E10_7", "protein_names_uniprotkb": "Protein BRASSINAZOLE-RESISTANT 1; Protein BIN2 SUBSTRATE 2", "protein_names_refseq": "Brassinosteroid signaling positive regulator (BZR1) family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G75080)", "pathway_count": 1, "publication_count": 23, "publication_id_list": "11130712;11970900;12114546;12427989;14593172;15681342;17681130;19376835;20466843;21258370;22914576;23020777;23111157;23328941;23660473;24019147;25561503;27862469;28011693;29654922;30287951;30833711;33324437", "class_list": "", "function": "Transcriptional repressor that binds to the brassinosteroid (BR) response element (BRRE) 5'-CGTG(T/C)G-3' in gene promoter. Regulates positively the brassinosteroid-signaling pathway (PubMed:33324437). Mediates downstream growth responses and negative feedback regulation of brassinosteroid biosynthesis. Promotes growth. Modulates ovule initiation and development by monitoring the expression of genes related to ovule development (e.g. HLL, ANT, and AP2). Negatively regulates the abscisic acid (ABA) signaling pathway during the post-germination stage (PubMed:33324437)., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 13, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "Q8VZD2;Q9C9Q2", "ec_number_list": [], "go_molecular_function": "GO:0003677 DNA binding;GO:0003700 DNA-binding transcription factor activity;GO:0000987 cis-regulatory region sequence-specific DNA binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005829 cytosol", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006355 regulation of DNA-templated transcription;GO:0045892 negative regulation of DNA-templated transcription;GO:0009414 response to water deprivation;GO:0009416 response to light stimulus", "synthesized_glycan_count": 0, "hit_score": 2.4, "record_id": "Q8S307-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000001001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8S8P5-1", "uniprot_id": [ { "id": "WRK33_ARATH", "url": "https://www.uniprot.org/uniprot/Q8S8P5", "type": "external" } ], "mass": 57179.0, "length": 519, "protein_name": "Probable WRKY transcription factor 33", "gene_name": "WRKY33", "organism": "Arabidopsis", "refseq_name": "WRKY DNA-binding protein 33", "refseq_ac": [ { "id": "NP_181381", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_181381", "type": "external" } ], "gene_names_uniprotkb": "WRKY33; T19C21.4", "gene_names_refseq": "ATWRKY33; T19C21.4; T19C21_4; WRKY DNA-BINDING PROTEIN 33; WRKY DNA-binding protein 33; WRKY33", "protein_names_uniprotkb": "Probable WRKY transcription factor 33; WRKY DNA-binding protein 33", "protein_names_refseq": "WRKY DNA-binding protein 33", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G38470)", "pathway_count": 1, "publication_count": 15, "publication_id_list": "10617197;15990873;17059405;18839316;21336597;21395886;21498677;21990940;22392279;22535423;23111157;23172892;25561503;27862469;32439826", "class_list": "", "function": "Transcription factor. Interacts specifically with the W box (5'-TTGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element. Involved in defense responses. Required for resistance to the necrotrophic fungal pathogen B.cinerea (PubMed:17059405, PubMed:21990940). Regulates the antagonistic relationship between defense pathways mediating responses to the bacterial pathogen P. syringae and the necrotrophic pathogen B.cinerea (PubMed:17059405). Required for the phytoalexin camalexin synthesis following infection with B.cinerea. Acts as a positive regulator of the camalexin biosynthetic genes PAD3 (CYP71B15) and CYP71A13 by binding to their promoters (PubMed:21498677, PubMed:22392279). Acts downstream of MPK3 and MPK6 in reprogramming the expression of camalexin biosynthetic genes, which drives the metabolic flow to camalexin production (PubMed:21498677). Functions with WRKY25 as positive regulator of salt stress response and abscisic acid (ABA) signaling (PubMed:18839316). Functions with WRKY25 and WRKY26 as positive regulator of plant thermotolerance by partially participating in ethylene-response signal transduction pathway (PubMed:21336597). The DNA-binding activity of WRKY33 is increased by SIB1 and SIB2 (PubMed:21990940)., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 4, "reported_mutagensis": 3, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q0WWP2", "ec_number_list": [], "go_molecular_function": "GO:0003700 DNA-binding transcription factor activity;GO:0046872 metal ion binding;GO:0000976 transcription cis-regulatory region binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006970 response to osmotic stress;GO:0009409 response to cold;GO:0006355 regulation of DNA-templated transcription;GO:0034605 cellular response to heat", "synthesized_glycan_count": 0, "hit_score": 1.6, "record_id": "Q8S8P5-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8SAB7-1", "uniprot_id": [ { "id": "SPK1_ARATH", "url": "https://www.uniprot.org/uniprot/Q8SAB7", "type": "external" } ], "mass": 206829.0, "length": 1830, "protein_name": "Guanine nucleotide exchange factor SPIKE 1", "gene_name": "SPK1", "organism": "Arabidopsis", "refseq_name": "guanyl-nucleotide exchange factors;GTPase binding;GTP binding protein", "refseq_ac": [ { "id": "NP_001319958", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001319958", "type": "external" } ], "gene_names_uniprotkb": "SPK1; FCAALL.346; dl4200c", "gene_names_refseq": "DL4200C; FCAALL.346; SPIKE1; SPK1", "protein_names_uniprotkb": "Guanine nucleotide exchange factor SPIKE 1", "protein_names_refseq": "GTP binding protein; GTPase binding; guanyl-nucleotide exchange factors", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G16340)", "pathway_count": 1, "publication_count": 29, "publication_id_list": "10617198;11826302;17267444;17317660;18308939;18433157;18686298;19376835;20466843;21109438;21768351;22223895;22683260;23111157;23328941;23572148;23660473;23776212;25561503;26091701;26187819;27419465;27862469;28011693;29167316;29654922;30833711;31623377;9461215", "class_list": "", "function": "Guanine nucleotide exchange factor (GEF) for Rho and Rac. GEF proteins activate small GTPases by exchanging bound GDP for free GTP. Controls actin polymerization via the two heteromeric complexes WAVE and actin-related protein (ARP) 2/3 (PubMed:18308939). Involved in cytoskeletal reorganization required for cell shape (e.g. trichome and cotyledon) control and tissue development (PubMed:11826302). Prevents cortical microtubules organization into parallel arrays oriented perpendicular to the axis of cell elongation to limit anisotropic cell growth during petal development, probably by triggering ARAC4/ROP2 and ARAC3/ROP6 activity (PubMed:31623377). Promotes polarized growth and cell-cell adhesion in the leaf epidermis probably by promoting the formation of endoplasmic reticulum (ER) exit site (ERES) and/or trafficking between the ER and Golgi (PubMed:21109438). Triggers ARAC3/ROP6 activation required for auxin-mediated inhibition of PIN2 internalization during gravitropic responses (, PubMed:22683260)., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 22, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O23479;Q152R9", "ec_number_list": [], "go_molecular_function": "GO:0005085 guanyl-nucleotide exchange factor activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005789 endoplasmic reticulum membrane;GO:0070971 endoplasmic reticulum exit site", "go_biological_process": "GO:0008064 regulation of actin polymerization or depolymerization;GO:0007264 small GTPase-mediated signal transduction;GO:0035023 regulation of Rho protein signal transduction;GO:0008360 regulation of cell shape;GO:0016192 vesicle-mediated transport", "synthesized_glycan_count": 0, "hit_score": 3.0, "record_id": "Q8SAB7-1", "record_type": "protein", "filter_code": "0000000.0000101.010000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8VWK4-1", "uniprot_id": [ { "id": "TRB1_ARATH", "url": "https://www.uniprot.org/uniprot/Q8VWK4", "type": "external" } ], "mass": 33017.0, "length": 300, "protein_name": "Telomere repeat-binding factor 1", "gene_name": "TRB1", "organism": "Arabidopsis", "refseq_name": "telomere repeat binding factor 1", "refseq_ac": [ { "id": "NP_564559", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_564559", "type": "external" } ], "gene_names_uniprotkb": "TRB1; F2J10.16", "gene_names_refseq": "ATTRB1; F2J10.16; F2J10_16; TELOMERE REPEAT BINDING FACTOR 1; TRB1; telomere repeat binding factor 1", "protein_names_uniprotkb": "Telomere repeat-binding factor 1; AtTRB1; MYB transcription factor", "protein_names_refseq": "telomere repeat binding factor 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G49950)", "pathway_count": 1, "publication_count": 15, "publication_id_list": "11130712;14576282;14593172;15589838;16463103;18387366;18479720;19102728;19947985;23111157;23572148;25561503;27862469;28011693;30833711", "class_list": "", "function": "Binds preferentially double-stranded telomeric repeats., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 7, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q8LA70;Q8VX39;Q9LPL9", "ec_number_list": [], "go_molecular_function": "GO:0003700 DNA-binding transcription factor activity;GO:0042803 protein homodimerization activity;GO:0000976 transcription cis-regulatory region binding;GO:0003691 double-stranded telomeric DNA binding;GO:1990841 promoter-specific chromatin binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005730 nucleolus;GO:0000785 chromatin;GO:0032991 protein-containing complex;GO:0000786 nucleosome", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006357 regulation of transcription by RNA polymerase II;GO:0006334 nucleosome assembly", "synthesized_glycan_count": 0, "hit_score": 1.6, "record_id": "Q8VWK4-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8VY07-1", "uniprot_id": [ { "id": "EPN1_ARATH", "url": "https://www.uniprot.org/uniprot/Q8VY07", "type": "external" } ], "mass": 60634.0, "length": 560, "protein_name": "Clathrin interactor EPSIN 1", "gene_name": "EPSIN1", "organism": "Arabidopsis", "refseq_name": "ENTH/VHS family protein", "refseq_ac": [ { "id": "NP_001318545", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001318545", "type": "external" } ], "gene_names_uniprotkb": "EPSIN1; EPSINR1; T22P22.100", "gene_names_refseq": "T22P22.100; T22P22_100", "protein_names_uniprotkb": "Clathrin interactor EPSIN 1; EPSIN-related 1", "protein_names_refseq": "ENTH/VHS family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G11710)", "pathway_count": 1, "publication_count": 18, "publication_id_list": "11130714;14593172;16231097;16905657;19376835;20466843;20543027;23111157;23572148;23660473;23776212;24601666;25561503;27862469;28011693;29167316;29654922;30833711", "class_list": "", "function": "May have a role in transport via clathrin-coated vesicles from the trans-Golgi network to endosomes. Stimulates clathrin assembly (By similarity). Does not seem to bind to phospholipids. Plays an important role in the vacuolar trafficking of soluble cargo proteins at the trans-Golgi network., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 13, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q0WLJ9;Q9LYF9", "ec_number_list": [], "go_molecular_function": "GO:0002020 protease binding;GO:0005543 phospholipid binding;GO:0030276 clathrin binding", "go_cellular_component": "GO:0030125 clathrin vesicle coat;GO:0005634 nucleus;GO:0005768 endosome;GO:0005794 Golgi apparatus;GO:0005884 actin filament", "go_biological_process": "GO:0006897 endocytosis;GO:0072659 protein localization to plasma membrane;GO:0006623 protein targeting to vacuole", "synthesized_glycan_count": 0, "hit_score": 1.9, "record_id": "Q8VY07-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8VY16-1", "uniprot_id": [ { "id": "CDP1_ARATH", "url": "https://www.uniprot.org/uniprot/Q8VY16", "type": "external" } ], "mass": 90823.0, "length": 819, "protein_name": "Plastid division protein CDP1, chloroplastic", "gene_name": "CDP1", "organism": "Arabidopsis", "refseq_name": "plastid division protein", "refseq_ac": [ { "id": "NP_001030725", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001030725", "type": "external" } ], "gene_names_uniprotkb": "CDP1; ARC6H; MVI11.9; PARC6; SUBA2", "gene_names_refseq": "A. THALIANA CHLOROPLAST DIVISION SITE POSITIONING 1; ARC6H; ATCDP1; CDP1; CHLOROPLAST DIVISION SITE POSITIONING 1; PARC6; paralog of ARC6", "protein_names_uniprotkb": "Plastid division protein CDP1, chloroplastic; ARC6-homolog protein; AtCDP1; Protein CHLOROPLAST DIVISION SITE POSITIONING 1; Protein PARALOG OF ARC6; Protein STROMULE BIOGENESIS ALTERED 2", "protein_names_refseq": "plastid division protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G19180)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "10907853;14593172;19453460;19564892;22060019;23936263;26527658;27862469;28984364;30824505", "class_list": "", "function": "Component of the plastid division machinery required for PDV1 localization to constriction sites. Involved in chloroplast division site placement (PubMed:23936263, PubMed:28984364). Required for the proper formation of FtsZ rings at the division site in nongreen plastids (e.g. etioplasts) (PubMed:23936263). Inhibits FtsZ assembly, functioning as an antagonistic regulator of FtsZ dynamics against ARC6, by recruiting ARC3 to the middle of the plastid to facilitate its interaction with FtsZ proteins (PubMed:26527658, PubMed:30824505). Required during stromule biogenesis in the leaf epidermis, especially in non-mesophyll cells plastids (PubMed:28984364)., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "Q2V3U5;Q9LJL2", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0009507 chloroplast;GO:0009706 chloroplast inner membrane;GO:0009528 plastid inner membrane", "go_biological_process": "GO:0009658 chloroplast organization;GO:0010020 chloroplast fission;GO:0043572 plastid fission", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "Q8VY16-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000001001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8VY80-1", "uniprot_id": [ { "id": "FLZ5_ARATH", "url": "https://www.uniprot.org/uniprot/Q8VY80", "type": "external" } ], "mass": 16964.0, "length": 147, "protein_name": "FCS-Like Zinc finger 5", "gene_name": "FLZ5", "organism": "Arabidopsis", "refseq_name": "senescence-associated family protein (DUF581)", "refseq_ac": [ { "id": "NP_564160", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_564160", "type": "external" } ], "gene_names_uniprotkb": "FLZ5; DUF581-2; F2E2.23", "gene_names_refseq": "F2E2.23; F2E2_23", "protein_names_uniprotkb": "FCS-Like Zinc finger 5", "protein_names_refseq": "senescence-associated family protein (DUF581)", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G22160)", "pathway_count": 1, "publication_count": 11, "publication_id_list": "11130712;14593172;23572148;24600465;24901469;25544057;25561503;26091701;26442059;27862469;29945970", "class_list": "", "function": "May act as an adapter to facilitate the interaction of SnRK1 complex with effector proteins, conferring tissue- and stimulus-type specific differences in the SnRK1 regulation pathway., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 5, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9LM43", "ec_number_list": [], "go_molecular_function": "GO:0008270 zinc ion binding;GO:0019900 kinase binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005739 mitochondrion;GO:0005829 cytosol", "go_biological_process": "GO:0042594 response to starvation;GO:0009749 response to glucose;GO:0009744 response to sucrose;GO:1905582 response to mannose", "synthesized_glycan_count": 0, "hit_score": 1.2, "record_id": "Q8VY80-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8VYJ2-1", "uniprot_id": [ { "id": "AHL1_ARATH", "url": "https://www.uniprot.org/uniprot/Q8VYJ2", "type": "external" } ], "mass": 37312.0, "length": 356, "protein_name": "AT-hook motif nuclear-localized protein 1", "gene_name": "AHL1", "organism": "Arabidopsis", "refseq_name": "AT-hook motif nuclear-localized protein 1", "refseq_ac": [ { "id": "NP_192945", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_192945", "type": "external" } ], "gene_names_uniprotkb": "AHL1; F16J13_150", "gene_names_refseq": "AHL1; AT-hook motif nuclear-localized protein 1; ATAHL1; F16J13.150; F16J13_150", "protein_names_uniprotkb": "AT-hook motif nuclear-localized protein 1", "protein_names_refseq": "AT-hook motif nuclear-localized protein 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G12080)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "10617198;14593172;15604740;20466843;24218605;27862469;28154133;30833711", "class_list": "", "function": "Transcription factor that specifically binds AT-rich DNA sequences related to the nuclear matrix attachment regions (MARs). May play a function in the positioning of chromatin fibers within the nucleus., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 2, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 2, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 2, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 1, "reported_phosphosites": 7, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 0, "biomarker_type": "", "glycan_count": 1, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "Q9SZ73", "ec_number_list": [], "go_molecular_function": "GO:0003680 minor groove of adenine-thymine-rich DNA binding;GO:0003677 DNA binding;GO:0003700 DNA-binding transcription factor activity;GO:0043565 sequence-specific DNA binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005654 nucleoplasm;GO:0005730 nucleolus;GO:0005737 cytoplasm;GO:0005739 mitochondrion", "go_biological_process": "GO:0006351 DNA-templated transcription", "synthesized_glycan_count": 0, "hit_score": 1.2, "record_id": "Q8VYJ2-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0100000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8VYK4-1", "uniprot_id": [ { "id": "NFYB8_ARATH", "url": "https://www.uniprot.org/uniprot/Q8VYK4", "type": "external" } ], "mass": 18998.0, "length": 173, "protein_name": "Nuclear transcription factor Y subunit B-8", "gene_name": "NFYB8", "organism": "Arabidopsis", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "NFYB8; T2N18.18", "gene_names_refseq": "", "protein_names_uniprotkb": "Nuclear transcription factor Y subunit B-8; AtNF-YB-8", "protein_names_refseq": "", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G37060)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "10617197;11250072;11867211;14593172;25561503;27862469", "class_list": "", "function": "Component of the NF-Y/HAP transcription factor complex. The NF-Y complex stimulates the transcription of various genes by recognizing and binding to a CCAAT motif in promoters., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 4, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9ZQC3", "ec_number_list": [], "go_molecular_function": "GO:0003700 DNA-binding transcription factor activity;GO:0046982 protein heterodimerization activity;GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific;GO:0043565 sequence-specific DNA binding;GO:0001228 DNA-binding transcription activator activity, RNA polymerase II-specific", "go_cellular_component": "GO:0005634 nucleus;GO:0016602 CCAAT-binding factor complex", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006357 regulation of transcription by RNA polymerase II", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q8VYK4-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8VYP6-1", "uniprot_id": [ { "id": "NOL9_ARATH", "url": "https://www.uniprot.org/uniprot/Q8VYP6", "type": "external" } ], "mass": 41481.0, "length": 368, "protein_name": "Polynucleotide 5'-hydroxyl-kinase NOL9", "gene_name": "T30N20.280", "organism": "Arabidopsis", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "T30N20.280", "gene_names_refseq": "", "protein_names_uniprotkb": "Polynucleotide 5'-hydroxyl-kinase NOL9; 2.7.1.-; Nucleolar protein 9 homolog", "protein_names_refseq": "", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G11010)", "pathway_count": 1, "publication_count": 3, "publication_id_list": "11130714;14593172;27862469", "class_list": "", "function": "Polynucleotide 5'-kinase involved in rRNA processing., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q945L9;Q9LEU0", "ec_number_list": [], "go_molecular_function": "GO:0005524 ATP binding;GO:0051731 polynucleotide 5'-hydroxyl-kinase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005730 nucleolus", "go_biological_process": "GO:0006364 rRNA processing;GO:0000448 cleavage in ITS2 between 5.8S rRNA and LSU-rRNA of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "Q8VYP6-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8VZ95-1", "uniprot_id": [ { "id": "VAP11_ARATH", "url": "https://www.uniprot.org/uniprot/Q8VZ95", "type": "external" } ], "mass": 28473.0, "length": 256, "protein_name": "Vesicle-associated protein 1-1", "gene_name": "PVA11", "organism": "Arabidopsis", "refseq_name": "vesicle associated protein", "refseq_ac": [ { "id": "NP_001030903", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001030903", "type": "external" } ], "gene_names_uniprotkb": "PVA11; T4C21.10; VAP27-1; VAP27", "gene_names_refseq": "(AT)VAP; VAMP/SYNAPTOBREVIN-ASSOCIATED PROTEIN 27-1; VAP27-1; VAP27; VAP; vesicle associated protein", "protein_names_uniprotkb": "Vesicle-associated protein 1-1; AtPVA11; Plant VAP homolog 11; VAMP-associated protein 1-1; Vesicle-associated protein 27-1", "protein_names_refseq": "vesicle associated protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G60600)", "pathway_count": 1, "publication_count": 33, "publication_id_list": "11130713;11907339;14593172;14993207;16227454;17651370;18433157;18463617;19245862;19376835;19423640;19688752;20374526;20466843;21768351;22223895;22438062;23111157;23328941;23572148;23660473;23776212;24601666;24909329;25561503;26091701;26187819;27419465;27532006;27862469;29167316;29654922;30833711", "class_list": "", "function": "Part of a membrane-cytoskeletal adapter complex that forms a bridge between the endoplasmic reticulum and the plasma membrane. Associates with microtubules., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 11, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "B9DHW7;Q2V3M6;Q2V3M7;Q8LDM1;Q9M003", "ec_number_list": [], "go_molecular_function": "GO:0043495 protein-membrane adaptor activity", "go_cellular_component": "GO:0005783 endoplasmic reticulum;GO:0005829 cytosol;GO:0005886 plasma membrane;GO:0005789 endoplasmic reticulum membrane;GO:0005776 autophagosome", "go_biological_process": "GO:0090158 endoplasmic reticulum membrane organization;GO:0061817 endoplasmic reticulum-plasma membrane tethering", "synthesized_glycan_count": 0, "hit_score": 3.4, "record_id": "Q8VZ95-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8VZG1-1", "uniprot_id": [ { "id": "DGK3_ARATH", "url": "https://www.uniprot.org/uniprot/Q8VZG1", "type": "external" } ], "mass": 53881.0, "length": 488, "protein_name": "Diacylglycerol kinase 3", "gene_name": "DGK3", "organism": "Arabidopsis", "refseq_name": "diacylglycerol kinase 3", "refseq_ac": [ { "id": "NP_849980", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_849980", "type": "external" } ], "gene_names_uniprotkb": "DGK3; MSF3.11", "gene_names_refseq": "ATDGK3; DGK3; MSF3.11; MSF3_11; diacylglycerol kinase 3", "protein_names_uniprotkb": "Diacylglycerol kinase 3; 2.7.1.107; AtDGK3; DAG kinase 3; DGK 3; Diglyceride kinase 3", "protein_names_refseq": "diacylglycerol kinase 3", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G18730)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "10617197;14593172;23111157;25561503;27862469", "class_list": "", "function": "Phosphorylates the second messenger diacylglycerol (DAG) to generate phosphatidic acid (PA), another important signaling molecule. PA is required for plant development and responses to abiotic stress and pathogen attack. May be involved in the accumulation of PA during cold stress (By similarity)., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9ZV46", "ec_number_list": [ { "id": "2.7.1.107", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.107", "type": "external" } ], "go_molecular_function": "GO:0004143 ATP-dependent diacylglycerol kinase activity;GO:0005524 ATP binding", "go_cellular_component": "GO:0005634 nucleus;GO:0016020 membrane;GO:0009506 plasmodesma", "go_biological_process": "GO:0006952 defense response;GO:0035556 intracellular signal transduction;GO:0007200 phospholipase C-activating G protein-coupled receptor signaling pathway;GO:0046486 glycerolipid metabolic process", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q8VZG1-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8VZJ1-2", "uniprot_id": [ { "id": "ATXR5_ARATH", "url": "https://www.uniprot.org/uniprot/Q8VZJ1", "type": "external" } ], "mass": 43034.0, "length": 379, "protein_name": "Histone-lysine N-methyltransferase ATXR5", "gene_name": "ATXR5", "organism": "Arabidopsis", "refseq_name": "TRITHORAX-RELATED PROTEIN 5", "refseq_ac": [ { "id": "NP_001078559", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001078559", "type": "external" } ], "gene_names_uniprotkb": "ATXR5; 17I14.20; MTH16.26; SDG15; SET15", "gene_names_refseq": "ARABIDOPSIS TRITHORAX-RELATED PROTEIN 5; ATXR5; F17I14.20; F17I14_20; PDE336; PIGMENT DEFECTIVE 336; SDG15; SETDOMAIN GROUP 15", "protein_names_uniprotkb": "Histone-lysine N-methyltransferase ATXR5; 2.1.1.369; Protein SET DOMAIN GROUP 15; TRX-related protein 5; Trithorax-related protein 5", "protein_names_refseq": "TRITHORAX-RELATED PROTEIN 5", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G09790)", "pathway_count": 1, "publication_count": 12, "publication_id_list": "10470850;11130714;11691919;14593172;16771839;19503079;19812700;20631708;22549957;24626927;27862469;35298257", "class_list": "", "function": "Histone methyltransferase that specifically monomethylates 'Lys-27' of histone H3 (H3K27me1). Has much higher activity on nucleosomes containing H3.1 than H3.3. Involved in the formation of constitutive heterochromatin and the silencing of heterochromatic elements. Influences which sets of rRNA gene variants are expressed or silenced., [UniProtKB, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "F4KFB9;Q1AJM5;Q9FXW6;Q9LXE2", "ec_number_list": [ { "id": "2.1.1.369", "url": "https://www.rhea-db.org/rhea/?query=ec:2.1.1.369", "type": "external" } ], "go_molecular_function": "GO:0003682 chromatin binding;GO:0008270 zinc ion binding;GO:0003712 transcription coregulator activity;GO:0004402 histone acetyltransferase activity;GO:0046976 histone H3K27 methyltransferase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0000785 chromatin;GO:0009507 chloroplast", "go_biological_process": "GO:0006357 regulation of transcription by RNA polymerase II;GO:0006275 regulation of DNA replication;GO:0032259 methylation;GO:0051726 regulation of cell cycle;GO:0009294 DNA-mediated transformation", "synthesized_glycan_count": 0, "hit_score": 1.3, "record_id": "Q8VZJ1-2", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8W104-1", "uniprot_id": [ { "id": "FBL17_ARATH", "url": "https://www.uniprot.org/uniprot/Q8W104", "type": "external" } ], "mass": 64769.0, "length": 593, "protein_name": "F-box/LRR-repeat protein 17", "gene_name": "FBL17", "organism": "Arabidopsis", "refseq_name": "RNI-like superfamily protein", "refseq_ac": [ { "id": "NP_567005", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_567005", "type": "external" } ], "gene_names_uniprotkb": "FBL17; T5N23.10", "gene_names_refseq": "FBL17", "protein_names_uniprotkb": "F-box/LRR-repeat protein 17; F-box-like protein 17", "protein_names_refseq": "RNI-like superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G54650)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "11077244;11130713;14593172;18948957;25561503;27862469", "class_list": "", "function": "Essential protein for male fertility. Component of the SCF(ASK-cullin-F-box) E3 ubiquitin ligase complex SCF(FBL17), which mediates the ubiquitination and subsequent proteasomal degradation of target proteins. Enables the switch in cell cycle control leading to male germ cell lineage formation from microspores after meiosis. Targets CDKA-1 inhibitors the degradation specifically in male germ cells (e.g. KRP6 and KRP7) and thus enables CDKA-1 activation and germ cell S-phase progression. Promotes twin sperm cell production and double fertilization., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9M1T4", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005634 nucleus;GO:0019005 SCF ubiquitin ligase complex;GO:0001673 male germ cell nucleus;GO:0035861 site of double-strand break;GO:0009507 chloroplast", "go_biological_process": "GO:0006974 DNA damage response;GO:0016567 protein ubiquitination;GO:0006511 ubiquitin-dependent protein catabolic process;GO:0000077 DNA damage checkpoint signaling;GO:0051302 regulation of cell division", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q8W104-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8W245-1", "uniprot_id": [ { "id": "ZIP10_ARATH", "url": "https://www.uniprot.org/uniprot/Q8W245", "type": "external" } ], "mass": 39489.0, "length": 364, "protein_name": "Probable zinc transporter 10", "gene_name": "ZIP10", "organism": "Arabidopsis", "refseq_name": "zinc transporter 10 precursor", "refseq_ac": [ { "id": "NP_174411", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_174411", "type": "external" } ], "gene_names_uniprotkb": "ZIP10; T19E23.6", "gene_names_refseq": "T19E23.6; T19E23_6; ZIP10; zinc transporter 10 precursor", "protein_names_uniprotkb": "Probable zinc transporter 10; ZRT/IRT-like protein 10", "protein_names_refseq": "zinc transporter 10 precursor", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G31260)", "pathway_count": 1, "publication_count": 3, "publication_id_list": "11130712;11500563;27862469", "class_list": "", "function": "Probably mediates zinc uptake from the rhizosphere., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9SHF4", "ec_number_list": [], "go_molecular_function": "GO:0005385 zinc ion transmembrane transporter activity", "go_cellular_component": "GO:0005886 plasma membrane;GO:0009507 chloroplast", "go_biological_process": "GO:0071577 zinc ion transmembrane transport", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "Q8W245-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q8W4D8-1", "uniprot_id": [ { "id": "DDL_ARATH", "url": "https://www.uniprot.org/uniprot/Q8W4D8", "type": "external" } ], "mass": 36953.0, "length": 314, "protein_name": "FHA domain-containing protein DDL", "gene_name": "DDL", "organism": "Arabidopsis", "refseq_name": "SMAD/FHA domain-containing protein", "refseq_ac": [ { "id": "NP_188691", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_188691", "type": "external" } ], "gene_names_uniprotkb": "DDL; K10D20.9", "gene_names_refseq": "DAWDLE; DDL", "protein_names_uniprotkb": "FHA domain-containing protein DDL; Protein DAWDLE", "protein_names_refseq": "SMAD/FHA domain-containing protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G20550)", "pathway_count": 1, "publication_count": 29, "publication_id_list": "10907853;14593172;16679419;17272265;18433157;18463617;18632581;19245862;19253305;19376835;20466843;21768351;22440515;23111157;23313986;23572148;23660473;23776212;24043427;25561503;26091701;26187819;27419465;27532006;27862469;28011693;29167316;29654922;30833711", "class_list": "", "function": "Involved in the microRNA (miRNA) and short interfering RNA (siRNA) biogenesis. May facilitate DCL1 to access or recognize primary miRNAs. Binds RNA non-specifically., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 9, "reported_mutagensis": 2, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9LJU3", "ec_number_list": [], "go_molecular_function": "GO:0003723 RNA binding;GO:0003729 mRNA binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0051301 cell division;GO:0035196 miRNA processing;GO:0048638 regulation of developmental growth", "synthesized_glycan_count": 0, "hit_score": 3.0, "record_id": "Q8W4D8-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q93V47-1", "uniprot_id": [ { "id": "GG2_ARATH", "url": "https://www.uniprot.org/uniprot/Q93V47", "type": "external" } ], "mass": 11139.0, "length": 100, "protein_name": "Guanine nucleotide-binding protein subunit gamma 2", "gene_name": "GG2", "organism": "Arabidopsis", "refseq_name": "G-protein gamma subunit 2", "refseq_ac": [ { "id": "NP_850746", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_850746", "type": "external" } ], "gene_names_uniprotkb": "GG2; AGG2; F5N5", "gene_names_refseq": "AGG2; AtGG2; G-protein gamma subunit 2", "protein_names_uniprotkb": "Guanine nucleotide-binding protein subunit gamma 2; AtAGG2; Ggamma-subunit 2; Heterotrimeric G protein gamma-subunit 2", "protein_names_refseq": "G-protein gamma subunit 2", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G22942)", "pathway_count": 1, "publication_count": 15, "publication_id_list": "10907853;11513956;17158913;17220359;17317660;17383830;17468261;18441222;19948787;20862254;21980142;22068106;22209167;22223895;27862469", "class_list": "", "function": "Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction. Involved in the abscisic acid (ABA) and ethylene signaling pathways. Regulates basipetal transport of auxin (IAA) in roots and hypocotyls, and thus modulates root architecture (e.g. lateral root formation). The heterotrimeric G protein controls defense responses to necrotrophic and vascular fungi probably by modulating cell wall-related genes expression; involved in resistance to Plectosphaerella cucumerina., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 4, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005634 nucleus;GO:0005886 plasma membrane;GO:0005834 heterotrimeric G-protein complex", "go_biological_process": "GO:0007186 G protein-coupled receptor signaling pathway;GO:0018345 protein palmitoylation;GO:0018342 protein prenylation;GO:0009845 seed germination;GO:0048527 lateral root development", "synthesized_glycan_count": 0, "hit_score": 1.6, "record_id": "Q93V47-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q93VJ4-1", "uniprot_id": [ { "id": "BEE2_ARATH", "url": "https://www.uniprot.org/uniprot/Q93VJ4", "type": "external" } ], "mass": 34674.0, "length": 304, "protein_name": "Transcription factor BEE 2", "gene_name": "BEE2", "organism": "Arabidopsis", "refseq_name": "BR enhanced expression 2", "refseq_ac": [ { "id": "NP_195372", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_195372", "type": "external" } ], "gene_names_uniprotkb": "BEE2; AP22.3; BHLH58; EN80", "gene_names_refseq": "AP22.3; AP22_3; BEE2; BR enhanced expression 2", "protein_names_uniprotkb": "Transcription factor BEE 2; AtbHLH58; Basic helix-loop-helix protein 58; Protein Brassinosteroid enhanced expression 2; Transcription factor EN 80; bHLH 58; bHLH transcription factor bHLH058", "protein_names_refseq": "BR enhanced expression 2", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G36540)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "10617198;12454087;12679534;12897250;14593172;14600211;27862469;9461215", "class_list": "", "function": "Positive regulator of brassinosteroid signaling., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O23226;Q3E9Q1;Q6YJU3;Q8LF81;Q8S3E4;Q940I6", "ec_number_list": [], "go_molecular_function": "GO:0003677 DNA binding;GO:0003700 DNA-binding transcription factor activity;GO:0046983 protein dimerization activity", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006355 regulation of DNA-templated transcription;GO:0045824 negative regulation of innate immune response", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "Q93VJ4-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q93WU9-1", "uniprot_id": [ { "id": "WRK51_ARATH", "url": "https://www.uniprot.org/uniprot/Q93WU9", "type": "external" } ], "mass": 22044.0, "length": 194, "protein_name": "Probable WRKY transcription factor 51", "gene_name": "WRKY51", "organism": "Arabidopsis", "refseq_name": "WRKY DNA-binding protein 51", "refseq_ac": [ { "id": "NP_568995", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_568995", "type": "external" } ], "gene_names_uniprotkb": "WRKY51; MXK3.3", "gene_names_refseq": "ARABIDOPSIS THALIANA WRKY DNA-BINDING PROTEIN 51; ATWRKY51; MXK3.34; WRKY DNA-binding protein 51; WRKY51", "protein_names_uniprotkb": "Probable WRKY transcription factor 51; WRKY DNA-binding protein 51", "protein_names_refseq": "WRKY DNA-binding protein 51", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G64810)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "10718197;21030507;22535423;27862469", "class_list": "", "function": "Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). Involved in defense responses. May act as positive regulator of salicylic acid (SA)-mediated signaling and negative regulator of jasmonic acid (JA)-mediated signaling (PubMed:21030507)., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9LV96", "ec_number_list": [], "go_molecular_function": "GO:0003700 DNA-binding transcription factor activity;GO:0000976 transcription cis-regulatory region binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006355 regulation of DNA-templated transcription;GO:0042742 defense response to bacterium;GO:0050832 defense response to fungus;GO:0009867 jasmonic acid mediated signaling pathway", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "Q93WU9-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q93WY4-1", "uniprot_id": [ { "id": "WRK12_ARATH", "url": "https://www.uniprot.org/uniprot/Q93WY4", "type": "external" } ], "mass": 24548.0, "length": 218, "protein_name": "Probable WRKY transcription factor 12", "gene_name": "WRKY12", "organism": "Arabidopsis", "refseq_name": "WRKY family transcription factor", "refseq_ac": [ { "id": "NP_566025", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_566025", "type": "external" } ], "gene_names_uniprotkb": "WRKY12; F16B22.46", "gene_names_refseq": "AtWRKY12; WRKY DNA-binding protein 12; WRKY12", "protein_names_uniprotkb": "Probable WRKY transcription factor 12; WRKY DNA-binding protein 12", "protein_names_refseq": "WRKY family transcription factor", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G44745)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "10617197;27862469", "class_list": "", "function": "Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity)., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q8S8S5", "ec_number_list": [], "go_molecular_function": "GO:0003700 DNA-binding transcription factor activity;GO:0000976 transcription cis-regulatory region binding;GO:0043565 sequence-specific DNA binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006355 regulation of DNA-templated transcription;GO:0009832 plant-type cell wall biogenesis", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "Q93WY4-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q944A6-1", "uniprot_id": [ { "id": "SNF4_ARATH", "url": "https://www.uniprot.org/uniprot/Q944A6", "type": "external" } ], "mass": 53466.0, "length": 487, "protein_name": "Sucrose nonfermenting 4-like protein", "gene_name": "SNF4", "organism": "Arabidopsis", "refseq_name": "sucrose nonfermenting-like protein", "refseq_ac": [ { "id": "NP_563834", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_563834", "type": "external" } ], "gene_names_uniprotkb": "SNF4; CBSCBS3; F7G19.11", "gene_names_refseq": "ATSNF4; F7G19.11; F7G19_11; KINbetagamma; PUTATIVE ACTIVATOR SUBUNIT OF SNF1-RELATED PROTEIN KINASE SNF4; SNF4; homolog of yeast sucrose nonfermenting 4", "protein_names_uniprotkb": "Sucrose nonfermenting 4-like protein; AKIN subunit betagamma; AKINbetagamma; CBS domain-containing protein CBSCBS3; SNF1-related protein kinase regulatory subunit betagamma; SNF4", "protein_names_refseq": "sucrose nonfermenting-like protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G09020)", "pathway_count": 1, "publication_count": 18, "publication_id_list": "10929106;11130712;11252725;14593172;15803412;17028154;17166759;19400948;21235649;22223895;22631563;23572148;25561503;25736509;27812990;27862469;28011693;29945970", "class_list": "", "function": "Regulatory subunit of the probable trimeric SNF1-related protein kinase (SnRK) complex, which may play a role in a signal transduction cascade regulating gene expression and carbohydrate metabolism in higher plants., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 7, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O04028;Q2QCL5;Q9FV59", "ec_number_list": [], "go_molecular_function": "GO:0004674 protein serine/threonine kinase activity;GO:0008047 enzyme activator activity;GO:0030295 protein kinase activator activity;GO:0019900 kinase binding;GO:0019887 protein kinase regulator activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0009507 chloroplast;GO:0009569 chloroplast starch grain", "go_biological_process": "GO:0006110 regulation of glycolytic process;GO:0016559 peroxisome fission;GO:0046777 protein autophosphorylation;GO:0042149 cellular response to glucose starvation;GO:2000377 regulation of reactive oxygen species metabolic process", "synthesized_glycan_count": 0, "hit_score": 1.9, "record_id": "Q944A6-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q948J9-1", "uniprot_id": [ { "id": "LIP2P_ARATH", "url": "https://www.uniprot.org/uniprot/Q948J9", "type": "external" } ], "mass": 31859.0, "length": 278, "protein_name": "Octanoyltransferase LIP2p, chloroplastic", "gene_name": "LIP2P", "organism": "Arabidopsis", "refseq_name": "Biotin/lipoate A/B protein ligase family", "refseq_ac": [ { "id": "NP_567866", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_567866", "type": "external" } ], "gene_names_uniprotkb": "LIP2P; F6I18.30; F6I18.40", "gene_names_refseq": "F6I18.40; F6I18_40; LIP2; octanoyl- transferase", "protein_names_uniprotkb": "Octanoyltransferase LIP2p, chloroplastic; 2.3.1.181; Lipoate-protein ligase 2p; Lipoyl-[acyl-carrier-protein]-protein-N-lipoyltransferase 2p; Plastidial lipoyltransferase 2", "protein_names_refseq": "Biotin/lipoate A/B protein ligase family", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G31050)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "10617198;11602263;23581459;27862469", "class_list": "", "function": "Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate-dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate (By similarity) (PubMed:11602263). Together with LIP1P is essential for de novo plastidial protein lipoylation during seed development. Acts redundantly with LIP2P2 (PubMed:23581459)., [UniProtKB, PubMed, PubMed, HAMAP]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O65544;O65545", "ec_number_list": [ { "id": "2.3.1.181", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.1.181", "type": "external" } ], "go_molecular_function": "GO:0033819 lipoyl(octanoyl) transferase activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005739 mitochondrion;GO:0009507 chloroplast", "go_biological_process": "GO:0009249 protein lipoylation", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "Q948J9-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q949S9-1", "uniprot_id": [ { "id": "SPF27_ARATH", "url": "https://www.uniprot.org/uniprot/Q949S9", "type": "external" } ], "mass": 29680.0, "length": 253, "protein_name": "Pre-mRNA-splicing factor SPF27 homolog", "gene_name": "MOS4", "organism": "Arabidopsis", "refseq_name": "modifier of snc1,4", "refseq_ac": [ { "id": "NP_566599", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_566599", "type": "external" } ], "gene_names_uniprotkb": "MOS4; BCAS2; MRC8.16; SPF27", "gene_names_refseq": "4; MOS4; Modifier of snc1", "protein_names_uniprotkb": "Pre-mRNA-splicing factor SPF27 homolog; Modifier of SNC1 member 4; Protein BCAS2 homolog", "protein_names_refseq": "modifier of snc1,4", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G18165)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "10907853;14593172;17575050;19629177;22248079;27862469;29588169", "class_list": "", "function": "Component of the MAC complex that probably regulates defense responses through transcriptional control and thereby is essential for plant innate immunity. Involved in mRNA splicing., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9LV24", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005634 nucleus;GO:0005730 nucleolus;GO:0005829 cytosol;GO:0071013 catalytic step 2 spliceosome;GO:0000974 Prp19 complex", "go_biological_process": "GO:0006397 mRNA processing;GO:0045087 innate immune response;GO:0008380 RNA splicing;GO:0042742 defense response to bacterium;GO:0050832 defense response to fungus", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q949S9-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q949T8-1", "uniprot_id": [ { "id": "ASHR3_ARATH", "url": "https://www.uniprot.org/uniprot/Q949T8", "type": "external" } ], "mass": 56122.0, "length": 497, "protein_name": "Histone-lysine N-methyltransferase ASHR3", "gene_name": "ASHR3", "organism": "Arabidopsis", "refseq_name": "SET domain group 4", "refseq_ac": [ { "id": "NP_567859", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_567859", "type": "external" } ], "gene_names_uniprotkb": "ASHR3; F6I18.230; SDG4; SET4; SML", "gene_names_refseq": "ASH1-RELATED 3; ASH1-related 3; ASHR3; F6I18.230; F6I18_230; SDG4; SET domain group 4", "protein_names_uniprotkb": "Histone-lysine N-methyltransferase ASHR3; 2.1.1.-; ASH1-related protein 3; Protein SET DOMAIN GROUP 4; Protein stamen loss", "protein_names_refseq": "SET domain group 4", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G30860)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "10617198;11691919;14593172;17978851;27862469", "class_list": "", "function": "Histone methyltransferase (By similarity). Involved in stamen development., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O65563", "ec_number_list": [ { "id": "2.1.1.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.1.1.-", "type": "external" } ], "go_molecular_function": "GO:0008270 zinc ion binding;GO:0046975 histone H3K36 methyltransferase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0000785 chromatin", "go_biological_process": "GO:0006355 regulation of DNA-templated transcription;GO:0032259 methylation", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q949T8-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q94AS5-1", "uniprot_id": [ { "id": "ICME_ARATH", "url": "https://www.uniprot.org/uniprot/Q94AS5", "type": "external" } ], "mass": 47582.0, "length": 427, "protein_name": "Isoprenylcysteine alpha-carbonyl methylesterase ICME", "gene_name": "ICME", "organism": "Arabidopsis", "refseq_name": "prenylcysteine methylesterase", "refseq_ac": [ { "id": "NP_197090", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_197090", "type": "external" } ], "gene_names_uniprotkb": "ICME; F14F8.240; PCME", "gene_names_refseq": "ATPCME; F14F8.240; F14F8_240; ICME; Isoprenylcysteine methylesterase; PCME; prenylcysteine methylesterase", "protein_names_uniprotkb": "Isoprenylcysteine alpha-carbonyl methylesterase ICME; 3.1.1.n2; AtPCME; Isoprenylcysteine methylesterase; Prenylcysteine methylesterase", "protein_names_refseq": "prenylcysteine methylesterase", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G15860)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "11130714;14593172;16870359;18957507;20868530;25561503;26187819;27862469", "class_list": "", "function": "Catalyzes the demethylation of isoprenylcysteine methylesters. In vitro, is specific for N-acetyl-S-farnesyl-L-cysteine methyl ester (AFCme) and has low activity toward N-acetyl-S-geranyl-L-cysteine methyl ester (AGCme). Acts as a positive regulator of ABA signaling. May be involved in the demethylation and inactivation of isoprenylated negative regulators of abscisic acid (ABA) signaling. Carboxyl methylation is a reversible and potentially regulated step in the post-translational modification of prenylated proteins., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 6, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "F4KBA0;Q9LFU2", "ec_number_list": [ { "id": "3.1.1.n2", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.1.n2", "type": "external" } ], "go_molecular_function": "GO:0010296 prenylcysteine methylesterase activity", "go_cellular_component": "GO:0000139 Golgi membrane;GO:0005576 extracellular region;GO:0016020 membrane;GO:0005789 endoplasmic reticulum membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "Q94AS5-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q94AW5-1", "uniprot_id": [ { "id": "ERF03_ARATH", "url": "https://www.uniprot.org/uniprot/Q94AW5", "type": "external" } ], "mass": 20606.0, "length": 181, "protein_name": "Ethylene-responsive transcription factor ERF003", "gene_name": "ERF003", "organism": "Arabidopsis", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "ERF003; F21J6.103", "gene_names_refseq": "", "protein_names_uniprotkb": "Ethylene-responsive transcription factor ERF003", "protein_names_refseq": "", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G25190)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "11130714;14593172;16407444;27862469", "class_list": "", "function": "Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity)., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0003700 DNA-binding transcription factor activity;GO:0000976 transcription cis-regulatory region binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0009873 ethylene-activated signaling pathway", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "Q94AW5-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q94C32-1", "uniprot_id": [ { "id": "MRG1_ARATH", "url": "https://www.uniprot.org/uniprot/Q94C32", "type": "external" } ], "mass": 36383.0, "length": 320, "protein_name": "Protein MRG1", "gene_name": "MRG1", "organism": "Arabidopsis", "refseq_name": "MRG family protein", "refseq_ac": [ { "id": "NP_568021", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_568021", "type": "external" } ], "gene_names_uniprotkb": "MRG1; C7A10.80", "gene_names_refseq": "AP22.79; AP22_79; MORF related gene 1; MRG1", "protein_names_uniprotkb": "Protein MRG1; MRG family protein 1; Morf Related Gene 1", "protein_names_refseq": "MRG family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G37280)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "10617198;14593172;18463617;20466843;23572148;25183522;25211338;27862469;30833711;9461215", "class_list": "", "function": "Chromatin remodeling factor. Acts as a 'reader' protein by binding to H3K36me3 and H3K36me3 to control histone H4 acetylation. Increases the transcriptional levels of the flowering time genes FLC and FT (PubMed:25183522, PubMed:25211338). Binds the chromatin at the FT promoter upon interaction with CO (Probable)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 10, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O23159", "ec_number_list": [], "go_molecular_function": "GO:1990841 promoter-specific chromatin binding", "go_cellular_component": "GO:0005634 nucleus;GO:0035267 NuA4 histone acetyltransferase complex;GO:0000123 histone acetyltransferase complex", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006355 regulation of DNA-templated transcription;GO:0006325 chromatin organization;GO:0048586 regulation of long-day photoperiodism, flowering", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "Q94C32-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q94CD4-1", "uniprot_id": [ { "id": "GILP_ARATH", "url": "https://www.uniprot.org/uniprot/Q94CD4", "type": "external" } ], "mass": 14560.0, "length": 134, "protein_name": "GSH-induced LITAF domain protein", "gene_name": "GILP", "organism": "Arabidopsis", "refseq_name": "GSH-induced LITAF domain protein", "refseq_ac": [ { "id": "NP_001330776", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001330776", "type": "external" } ], "gene_names_uniprotkb": "GILP; T19L5.5; T31B5_10", "gene_names_refseq": "AtGILP; GILP; GSH-induced LITAF domain protein; T19L5.5", "protein_names_uniprotkb": "GSH-induced LITAF domain protein; AtGILP", "protein_names_refseq": "GSH-induced LITAF domain protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G13190)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "11130714;14593172;21526181;27862469", "class_list": "", "function": "Acts as a membrane anchor, bringing other regulators of programmed cell death (PCD) to the plasma membrane. Negatively regulates hypersensitive cell death., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A1P8BBV2;Q9LYV7", "ec_number_list": [], "go_molecular_function": "GO:0008270 zinc ion binding", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "GO:0071456 cellular response to hypoxia;GO:0034051 negative regulation of plant-type hypersensitive response", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "Q94CD4-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q94JY4-1", "uniprot_id": [ { "id": "BRK1_ARATH", "url": "https://www.uniprot.org/uniprot/Q94JY4", "type": "external" } ], "mass": 9481.0, "length": 85, "protein_name": "Protein BRICK 1", "gene_name": "BRK1", "organism": "Arabidopsis", "refseq_name": "BRICK1", "refseq_ac": [ { "id": "NP_179849", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_179849", "type": "external" } ], "gene_names_uniprotkb": "BRK1; T9I22.8", "gene_names_refseq": "ATBRK1; BRICK1; BRK1; HSPC300; T9I22.8; T9I22_8", "protein_names_uniprotkb": "Protein BRICK 1; AtBRK1", "protein_names_refseq": "BRICK1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT2G22640)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "10617197;12015123;14593172;15296760;15316111;15534215;16006582;27862469", "class_list": "", "function": "Involved in regulation of actin and microtubule organization. Part of a WAVE complex that activates the Arp2/3 complex., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9ZQ49", "ec_number_list": [], "go_molecular_function": "GO:0042802 identical protein binding;GO:0044877 protein-containing complex binding", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005856 cytoskeleton;GO:0005886 plasma membrane;GO:0031209 SCAR complex;GO:0071944 cell periphery", "go_biological_process": "GO:0008064 regulation of actin polymerization or depolymerization;GO:0000902 cell morphogenesis;GO:0030041 actin filament polymerization;GO:0045010 actin nucleation;GO:0048870 cell motility", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "Q94JY4-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q96502-1", "uniprot_id": [ { "id": "COL2_ARATH", "url": "https://www.uniprot.org/uniprot/Q96502", "type": "external" } ], "mass": 38524.0, "length": 347, "protein_name": "Zinc finger protein CONSTANS-LIKE 2", "gene_name": "COL2", "organism": "Arabidopsis", "refseq_name": "CONSTANS-like 2", "refseq_ac": [ { "id": "NP_186887", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_186887", "type": "external" } ], "gene_names_uniprotkb": "COL2; F11A12.106; F11A12.7; F16B3.2", "gene_names_refseq": "ATCOL2; B-box domain protein 3; BBX3; COL2; CONSTANS-LIKE 2; CONSTANS-like 2; F11A12.7; F11A12_7", "protein_names_uniprotkb": "Zinc finger protein CONSTANS-LIKE 2", "protein_names_refseq": "CONSTANS-like 2", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G02380)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "11130713;11359606;12692345;14593172;27862469", "class_list": "", "function": "Putative transcription factor. Does not affect flowering time., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0003677 DNA binding;GO:0003700 DNA-binding transcription factor activity;GO:0008270 zinc ion binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:2000028 regulation of photoperiodism, flowering;GO:0009658 chloroplast organization;GO:0009909 regulation of flower development", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q96502-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9ASZ1-1", "uniprot_id": [ { "id": "STKLO_ARATH", "url": "https://www.uniprot.org/uniprot/Q9ASZ1", "type": "external" } ], "mass": 34058.0, "length": 302, "protein_name": "GLABROUS1 enhancer-binding protein", "gene_name": "GEBP", "organism": "Arabidopsis", "refseq_name": "DNA-binding storekeeper protein-related transcriptional regulator", "refseq_ac": [ { "id": "NP_567163", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_567163", "type": "external" } ], "gene_names_uniprotkb": "GEBP; F5I10.11; STKR1", "gene_names_refseq": "A_IG005I10.11; A_IG005I10_11; F5I10.11; F5I10_11", "protein_names_uniprotkb": "GLABROUS1 enhancer-binding protein; Probable transcription factor At4g00270; Protein GeBP; Protein STOREKEEPER RELATED 1; Storekeeper-like protein At4g00270", "protein_names_refseq": "DNA-binding storekeeper protein-related transcriptional regulator", "tax_id": 3702, "disease": "", "pathway": " (ath:AT4G00270)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "10617198;12535344;14593172;18162594;21875893;23572148;24600465;25561503;27862469;29192025", "class_list": "", "function": "DNA-binding protein, which specifically recognizes the GL1 enhancer sequence (PubMed:12535344). May be involved in leaf initiation (PubMed:12535344). May play redundant roles with GPL1 and GPL2 in cytokinin responses by regulating the transcript levels of type-A ARR response genes (PubMed:18162594). Involved in stress responses (PubMed:21875893). Plays a repressive role in cell expansion by counteracting the positive role of CPR5 in this process, but does not regulate cell proliferation or endoreduplication (PubMed:21875893). May play a role in plant defense (PubMed:29192025)., [UniProtKB, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 4, "reported_mutagensis": 7, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O23075", "ec_number_list": [], "go_molecular_function": "GO:0003700 DNA-binding transcription factor activity;GO:0019900 kinase binding;GO:0000976 transcription cis-regulatory region binding;GO:0000987 cis-regulatory region sequence-specific DNA binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005730 nucleolus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006355 regulation of DNA-templated transcription;GO:0002229 defense response to oomycetes", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "Q9ASZ1-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9C4Z7-1", "uniprot_id": [ { "id": "MINE1_ARATH", "url": "https://www.uniprot.org/uniprot/Q9C4Z7", "type": "external" } ], "mass": 25748.0, "length": 229, "protein_name": "Cell division topological specificity factor homolog, chloroplastic", "gene_name": "MINE1", "organism": "Arabidopsis", "refseq_name": "homologue of bacterial MinE 1", "refseq_ac": [ { "id": "NP_564964", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_564964", "type": "external" } ], "gene_names_uniprotkb": "MINE1; ARC12; F10D13.22; F23O10.25", "gene_names_refseq": "ARC12; ATMINE1; F23O10.25; F23O10_25; MINE1; accumulation and replication of chloroplasts 12; homologue of bacterial MinE 1", "protein_names_uniprotkb": "Cell division topological specificity factor homolog, chloroplastic; AtMinE1; Protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 12", "protein_names_refseq": "homologue of bacterial MinE 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G69390)", "pathway_count": 1, "publication_count": 19, "publication_id_list": "11130712;11743109;11975738;12029464;12164807;14593172;15753112;16014621;16146521;17304239;17451550;17855384;18204083;19403522;19966487;23936263;26500667;27862469;29967285", "class_list": "", "function": "Acts as a topological specificity factor during plastid division and specify plastid constriction sites (such as the Z-ring) in a MCD1-dependent manner (PubMed:23936263, PubMed:29967285). Especially involved in epidermal plastids division in a FTSZ1-dependent manner (PubMed:26500667). Required for the proper formation of FtsZ rings at the division site in nongreen plastids (e.g. etioplasts) (PubMed:23936263). May contribute to gravitropism in stems and hypocotyls. Stimulates MIND1 ATPase activity. In cooperation with MIND1, prevents FtsZ ring formation anywhere outside of the mid-plastids., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 13, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0042802 identical protein binding;GO:0051117 ATPase binding", "go_cellular_component": "GO:0005739 mitochondrion;GO:0009507 chloroplast", "go_biological_process": "GO:0051301 cell division;GO:0010020 chloroplast fission", "synthesized_glycan_count": 0, "hit_score": 2.0, "record_id": "Q9C4Z7-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9C593-1", "uniprot_id": [ { "id": "O3L1_ARATH", "url": "https://www.uniprot.org/uniprot/Q9C593", "type": "external" } ], "mass": 28006.0, "length": 264, "protein_name": "Protein OXIDATIVE STRESS 3 LIKE 1", "gene_name": "O3L1", "organism": "Arabidopsis", "refseq_name": "hybrid signal transduction histidine kinase M-like protein", "refseq_ac": [ { "id": "NP_680182", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_680182", "type": "external" } ], "gene_names_uniprotkb": "O3L1; F13M11; T6G21.50", "gene_names_refseq": "", "protein_names_uniprotkb": "Protein OXIDATIVE STRESS 3 LIKE 1; AtO3L1", "protein_names_refseq": "hybrid signal transduction histidine kinase M-like protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G21940)", "pathway_count": 1, "publication_count": 13, "publication_id_list": "11130714;11910074;14593172;18980652;19376835;21768351;23572148;24043427;25561503;26091701;27862469;28011693;30833711", "class_list": "", "function": "Promotes slightly the tolerance to zinc (Zn) and to oxidizing chemicals (e.g. diamide)., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q8GX89", "ec_number_list": [], "go_molecular_function": "GO:0016301 kinase activity", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006979 response to oxidative stress;GO:0010043 response to zinc ion", "synthesized_glycan_count": 0, "hit_score": 1.4, "record_id": "Q9C593-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9C5C0-1", "uniprot_id": [ { "id": "MPK18_ARATH", "url": "https://www.uniprot.org/uniprot/Q9C5C0", "type": "external" } ], "mass": 69352.0, "length": 615, "protein_name": "Mitogen-activated protein kinase 18", "gene_name": "MPK18", "organism": "Arabidopsis", "refseq_name": "mitogen-activated protein kinase 18", "refseq_ac": [ { "id": "NP_175756", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_175756", "type": "external" } ], "gene_names_uniprotkb": "MPK18; F22G10.12; T3F20.17", "gene_names_refseq": "ARABIDOPSIS THALIANA MAP KINASE 18; ATMPK18; F22G10.12; MPK18; mitogen-activated protein kinase 18", "protein_names_uniprotkb": "Mitogen-activated protein kinase 18; 2.7.11.24; AtMPK18; MAP kinase 18", "protein_names_refseq": "mitogen-activated protein kinase 18", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G53510)", "pathway_count": 1, "publication_count": 11, "publication_id_list": "11130712;14593172;16537113;19392697;23111157;23328941;25561503;27862469;28154133;28848569;30349547", "class_list": "", "function": "Mitogen-activated protein kinase (MAPK) that is specifically regulated by PHS1 and MAPKKK20 and mediates signaling that regulates cortical microtubule functions, maybe through regulation of microtubule dynamic instability., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 10, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 10, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 10, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 1, "reported_phosphosites": 4, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 0, "biomarker_type": "", "glycan_count": 1, "disease_count": 0, "glyco_site_count": 10, "binding_glycan_count": 0, "secondary_ac_list": "Q9LPG7", "ec_number_list": [ { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.3.2.27", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.2.27", "type": "external" }, { "id": "2.7.10.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.-", "type": "external" }, { "id": "3.1.4.46", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.4.46", "type": "external" }, { "id": "2.7.11.25", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.25", "type": "external" }, { "id": "2.7.11.22", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.22", "type": "external" }, { "id": "2.7.10.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.1", "type": "external" }, { "id": "2.7.11.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.-", "type": "external" }, { "id": "2.7.11.24", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.24", "type": "external" }, { "id": "2.7.12.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.1", "type": "external" }, { "id": "2.7.11.23", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.23", "type": "external" }, { "id": "2.7.12.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.2", "type": "external" }, { "id": "2.7.-.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.-.-", "type": "external" }, { "id": "3.1.26.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.26.-", "type": "external" }, { "id": "3.1.3.16", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.16", "type": "external" }, { "id": "2.7.11.34", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.34", "type": "external" }, { "id": "4.6.1.2", "url": "https://www.rhea-db.org/rhea/?query=ec:4.6.1.2", "type": "external" } ], "go_molecular_function": "GO:0004674 protein serine/threonine kinase activity;GO:0005524 ATP binding;GO:0004707 MAP kinase activity;GO:0106310 protein serine kinase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm", "go_biological_process": "GO:0007165 signal transduction;GO:0035556 intracellular signal transduction;GO:0043622 cortical microtubule organization", "synthesized_glycan_count": 0, "hit_score": 2.3, "record_id": "Q9C5C0-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0100000001001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9C6K4-1", "uniprot_id": [ { "id": "Q9C6K4_ARATH", "url": "https://www.uniprot.org/uniprot/Q9C6K4", "type": "external" } ], "mass": 44957.0, "length": 385, "protein_name": "Transcription factor", "gene_name": "F7O12.4; F7O12_4", "organism": "Arabidopsis", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "F7O12.4; F7O12_4", "gene_names_refseq": "", "protein_names_uniprotkb": "Transcription factor", "protein_names_refseq": "", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G76870)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "11130712;20466843;25561503;27862469;30833711", "class_list": "", "function": "", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 3, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A178WBG6", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q9C6K4-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9C7E8-1", "uniprot_id": [ { "id": "COL15_ARATH", "url": "https://www.uniprot.org/uniprot/Q9C7E8", "type": "external" } ], "mass": 47606.0, "length": 433, "protein_name": "Zinc finger protein CONSTANS-LIKE 15", "gene_name": "COL15", "organism": "Arabidopsis", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "COL15; F13K9.15", "gene_names_refseq": "", "protein_names_uniprotkb": "Zinc finger protein CONSTANS-LIKE 15", "protein_names_refseq": "", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G28050)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "11130712;12692345;14593172;27862469", "class_list": "", "function": "", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0003700 DNA-binding transcription factor activity;GO:0008270 zinc ion binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006355 regulation of DNA-templated transcription", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "Q9C7E8-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9C7S5-1", "uniprot_id": [ { "id": "PSYR1_ARATH", "url": "https://www.uniprot.org/uniprot/Q9C7S5", "type": "external" } ], "mass": 121521.0, "length": 1095, "protein_name": "Tyrosine-sulfated glycopeptide receptor 1", "gene_name": "PSY1R", "organism": "Arabidopsis", "refseq_name": "Leucine-rich receptor-like protein kinase family protein", "refseq_ac": [ { "id": "NP_177374", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_177374", "type": "external" } ], "gene_names_uniprotkb": "PSY1R; PSYR1; T9N14.20", "gene_names_refseq": "PSY1 receptor; PSY1R; T9N14.20; T9N14_20", "protein_names_uniprotkb": "Tyrosine-sulfated glycopeptide receptor 1; 2.7.11.1; PSY1 receptor", "protein_names_refseq": "Leucine-rich receptor-like protein kinase family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G72300)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "11130712;14593172;17989228;23062058;25267325;27862469;29230231", "class_list": "", "function": "Tyrosine-sulfated glycopeptide receptor with a serine/threonine-protein kinase activity (PubMed:17989228, PubMed:25267325). Regulates, in response to tyrosine-sulfated glycopeptide binding, a signaling cascade involved in cellular proliferation and plant growth (PubMed:17989228). Not involved in PSK perception (PubMed:17989228). Involved in plant immunity, with antagonistic effects on bacterial and fungal resistances (PubMed:23062058). Mediates activation of the plasma membrane H(+)-ATPase by PSY1 (PubMed:25267325). Phosphorylates AHA2 at Thr-881 (PubMed:25267325)., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 17, "predicted_n_glycosites": 17, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 10, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 17, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [ { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.3.2.27", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.2.27", "type": "external" }, { "id": "2.7.10.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.-", "type": "external" }, { "id": "3.1.4.46", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.4.46", "type": "external" }, { "id": "2.7.11.25", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.25", "type": "external" }, { "id": "2.7.11.22", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.22", "type": "external" }, { "id": "2.7.10.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.1", "type": "external" }, { "id": "2.7.11.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.-", "type": "external" }, { "id": "2.7.11.24", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.24", "type": "external" }, { "id": "2.7.12.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.1", "type": "external" }, { "id": "2.7.11.23", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.23", "type": "external" }, { "id": "2.7.12.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.2", "type": "external" }, { "id": "2.7.-.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.-.-", "type": "external" }, { "id": "3.1.26.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.26.-", "type": "external" }, { "id": "3.1.3.16", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.16", "type": "external" }, { "id": "2.7.11.34", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.34", "type": "external" }, { "id": "4.6.1.2", "url": "https://www.rhea-db.org/rhea/?query=ec:4.6.1.2", "type": "external" } ], "go_molecular_function": "GO:0004674 protein serine/threonine kinase activity;GO:0004888 transmembrane signaling receptor activity;GO:0005524 ATP binding;GO:0042802 identical protein binding;GO:0001653 peptide receptor activity", "go_cellular_component": "GO:0005886 plasma membrane;GO:0016020 membrane", "go_biological_process": "GO:0009826 unidimensional cell growth;GO:0045851 pH reduction;GO:0031347 regulation of defense response", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q9C7S5-1", "record_type": "protein", "filter_code": "0000000.0100101.010000.100000000000000000.0000000010001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9C7T7-1", "uniprot_id": [ { "id": "CEPR2_ARATH", "url": "https://www.uniprot.org/uniprot/Q9C7T7", "type": "external" } ], "mass": 107905.0, "length": 977, "protein_name": "Receptor protein-tyrosine kinase CEPR2", "gene_name": "CEPR2", "organism": "Arabidopsis", "refseq_name": "Leucine-rich receptor-like protein kinase family protein", "refseq_ac": [ { "id": "NP_177363", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_177363", "type": "external" } ], "gene_names_uniprotkb": "CEPR2; T9N14.3", "gene_names_refseq": "C-terminally encoded peptide receptor 2; CEPR2; T9N14.3; T9N14_3", "protein_names_uniprotkb": "Receptor protein-tyrosine kinase CEPR2; 2.7.10.1; Protein C-TERMINALLY ENCODED PEPTIDE RECEPTOR 2", "protein_names_refseq": "Leucine-rich receptor-like protein kinase family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G72180)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "11130712;12671079;12972053;20064227;21423366;21431781;25324386;27862469", "class_list": "", "function": "Receptor kinase involved in the perception of C-terminally encoded plant signaling peptide (CEP) and subsequent regulation of root and shoot development. Together with CEPR1, mediates systemic nitrogen (N)-demand signaling upon the perception of root-derived peptides (e.g. CEP1) via the up-regulation of genes involved in N uptake and assimilation pathways., [UniProtKB, PubMed]", "predicted_glycosites": 11, "predicted_n_glycosites": 11, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 4, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 11, "binding_glycan_count": 0, "secondary_ac_list": "Q0WPH6", "ec_number_list": [ { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.7.10.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.-", "type": "external" }, { "id": "2.7.10.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.2", "type": "external" }, { "id": "2.7.10.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.1", "type": "external" }, { "id": "2.7.12.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.1", "type": "external" }, { "id": "2.7.12.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.2", "type": "external" } ], "go_molecular_function": "GO:0004674 protein serine/threonine kinase activity;GO:0005524 ATP binding;GO:0017046 peptide hormone binding;GO:0042277 peptide binding;GO:0004714 transmembrane receptor protein tyrosine kinase activity", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "GO:0006970 response to osmotic stress;GO:0010555 response to mannitol;GO:0048831 regulation of shoot system development;GO:0090548 response to nitrate starvation;GO:1902025 nitrate import", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "Q9C7T7-1", "record_type": "protein", "filter_code": "0000000.0000101.010000.100000000000000000.0000000010001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9C944-1", "uniprot_id": [ { "id": "H2AV3_ARATH", "url": "https://www.uniprot.org/uniprot/Q9C944", "type": "external" } ], "mass": 14272.0, "length": 134, "protein_name": "Probable histone H2A variant 3", "gene_name": "F14G24.1", "organism": "Arabidopsis", "refseq_name": "histone H2A protein 9", "refseq_ac": [ { "id": "NP_175683", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_175683", "type": "external" } ], "gene_names_uniprotkb": "F14G24.1", "gene_names_refseq": "F14G24.1; F14G24_1; HTA9; histone H2A protein 9", "protein_names_uniprotkb": "Probable histone H2A variant 3; H2A.F/Z 3; HTA9", "protein_names_refseq": "histone H2A protein 9", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G52740)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "11130712;14593172;16751347;27862469", "class_list": "", "function": "Variant histones H2A are synthesized throughout the cell cycle and are very different from classical S-phase regulated H2A. May replace conventional H2A in a subset of nucleosomes. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling (By similarity)., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0003677 DNA binding;GO:0046982 protein heterodimerization activity;GO:0030527 structural constituent of chromatin", "go_cellular_component": "GO:0005634 nucleus;GO:0000786 nucleosome;GO:0000325 plant-type vacuole", "go_biological_process": "GO:0009266 response to temperature stimulus;GO:0010468 regulation of gene expression;GO:0031507 heterochromatin formation", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "Q9C944-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9C968-1", "uniprot_id": [ { "id": "CCA24_ARATH", "url": "https://www.uniprot.org/uniprot/Q9C968", "type": "external" } ], "mass": 51637.0, "length": 461, "protein_name": "Cyclin-A2-4", "gene_name": "CYCA2-4", "organism": "Arabidopsis", "refseq_name": "Cyclin A2;4", "refseq_ac": [ { "id": "NP_178153", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_178153", "type": "external" } ], "gene_names_uniprotkb": "CYCA2-4; F5I6.12", "gene_names_refseq": "4; CYCA2; Cyclin A2; F5I6.12; F5I6_12", "protein_names_uniprotkb": "Cyclin-A2-4; 4; CycA2; G2/mitotic-specific cyclin-A2-4", "protein_names_refseq": "4; Cyclin A2", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G80370)", "pathway_count": 1, "publication_count": 3, "publication_id_list": "11130712;15208425;27862469", "class_list": "", "function": "", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0000307 cyclin-dependent protein kinase holoenzyme complex", "go_biological_process": "GO:0051301 cell division;GO:0010389 regulation of G2/M transition of mitotic cell cycle;GO:0000082 G1/S transition of mitotic cell cycle;GO:0010374 stomatal complex development", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "Q9C968-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9C9Y6-1", "uniprot_id": [ { "id": "TRXH9_ARATH", "url": "https://www.uniprot.org/uniprot/Q9C9Y6", "type": "external" } ], "mass": 15334.0, "length": 140, "protein_name": "Thioredoxin H9", "gene_name": "TRX9", "organism": "Arabidopsis", "refseq_name": "thioredoxin H-type 9", "refseq_ac": [ { "id": "NP_001078124", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001078124", "type": "external" } ], "gene_names_uniprotkb": "TRX9; ATH9; F17O14.18", "gene_names_refseq": "ATH9; TH9; THIOREDOXIN TYPE H 9; TRX H9; thioredoxin H-type 9", "protein_names_uniprotkb": "Thioredoxin H9; AtTRX9; AtTrxh9; Thioredoxin 9", "protein_names_refseq": "thioredoxin H-type 9", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G08710)", "pathway_count": 1, "publication_count": 34, "publication_id_list": "11130713;15619004;17586839;17651370;18433157;18463617;18686298;19245862;19376835;19825616;20133584;20374526;20466843;21768351;22060019;22438062;22631563;23111157;23172892;23572148;23660473;23776212;23820729;24043427;24601666;24924143;25561503;26091701;27419465;27532006;27862469;28011693;29167316;30833711", "class_list": "", "function": "Probable thiol-disulfide oxidoreductase that may play a role in intercellular communication due to its ability to move from cell to cell., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 3, "reported_mutagensis": 2, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0016491 oxidoreductase activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005829 cytosol;GO:0005886 plasma membrane;GO:0009536 plastid", "go_biological_process": "GO:0007154 cell communication", "synthesized_glycan_count": 0, "hit_score": 3.5, "record_id": "Q9C9Y6-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9CA45-1", "uniprot_id": [ { "id": "SOFL2_ARATH", "url": "https://www.uniprot.org/uniprot/Q9CA45", "type": "external" } ], "mass": 16389.0, "length": 147, "protein_name": "Protein SOB FIVE-LIKE 2", "gene_name": "SOFL2", "organism": "Arabidopsis", "refseq_name": "SOB five-like 2", "refseq_ac": [ { "id": "NP_177053", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_177053", "type": "external" } ], "gene_names_uniprotkb": "SOFL2; F14K14.2", "gene_names_refseq": "ATSOFL2; F14K14.2; F14K14_2; SOB FIVE-LIKE 2; SOB five-like 2; SOFL2", "protein_names_uniprotkb": "Protein SOB FIVE-LIKE 2; AtSOFL2", "protein_names_refseq": "SOB five-like 2", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G68870)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "11130712;16709198;20011053;25561503;27862469;29467189", "class_list": "", "function": "Involved in cytokinin-mediated development (PubMed:20011053, PubMed:29467189). Together with SOFL2, triggers the endogenous content of specific bioactive cytokinins derived from the biosynthetic intermediates trans-zeatin riboside monophosphate (tZRMP) and N(6)-(Delta(2)-isopentenyl)adenosine monophosphate (iPRMP) such as N-glucosides trans-zeatin 7-glucoside (tZ7G), cis-zeatin 7-glucoside (cZ7G) and N(6)-(Delta(2)-isopentenyl)adenine 7-glucoside (iP7G) (PubMed:20011053)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 2, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm", "go_biological_process": "GO:0009691 cytokinin biosynthetic process;GO:0009736 cytokinin-activated signaling pathway;GO:0009690 cytokinin metabolic process", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q9CA45-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9CA67-1", "uniprot_id": [ { "id": "CHLP_ARATH", "url": "https://www.uniprot.org/uniprot/Q9CA67", "type": "external" } ], "mass": 51838.0, "length": 467, "protein_name": "Geranylgeranyl diphosphate reductase, chloroplastic", "gene_name": "CHLP", "organism": "Arabidopsis", "refseq_name": "Pyridine nucleotide-disulfide oxidoreductase family protein", "refseq_ac": [ { "id": "NP_177587", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_177587", "type": "external" } ], "gene_names_uniprotkb": "CHLP; F1M20.15", "gene_names_refseq": "F1M20.15; F1M20_15; GERANYLGERANYL REDUCTASE", "protein_names_uniprotkb": "Geranylgeranyl diphosphate reductase, chloroplastic; 1.3.1.83; Geranylgeranyl reductase", "protein_names_refseq": "Pyridine nucleotide-disulfide oxidoreductase family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G74470)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "11130712;14593172;19423640;22212719;27862469;9492312", "class_list": "", "function": "Catalyzes the reduction of geranylgeranyl diphosphate to phytyl diphosphate, providing phytol for both tocopherol and chlorophyll synthesis., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "B9DHM2;O49594;Q56YY5;Q8H170", "ec_number_list": [ { "id": "1.3.1.83", "url": "https://www.rhea-db.org/rhea/?query=ec:1.3.1.83", "type": "external" } ], "go_molecular_function": "GO:0071949 FAD binding;GO:0045550 geranylgeranyl reductase activity;GO:0102067 geranylgeranyl diphosphate reductase activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005739 mitochondrion;GO:0009535 chloroplast thylakoid membrane;GO:0009507 chloroplast;GO:0009534 chloroplast thylakoid", "go_biological_process": "GO:0010189 vitamin E biosynthetic process;GO:0015979 photosynthesis;GO:0015995 chlorophyll biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q9CA67-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9CAC5-1", "uniprot_id": [ { "id": "NDHL_ARATH", "url": "https://www.uniprot.org/uniprot/Q9CAC5", "type": "external" } ], "mass": 21963.0, "length": 191, "protein_name": "NAD(P)H-quinone oxidoreductase subunit L, chloroplastic", "gene_name": "ndhL", "organism": "Arabidopsis", "refseq_name": "inorganic carbon transport protein-like protein", "refseq_ac": [ { "id": "NP_177233", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_177233", "type": "external" } ], "gene_names_uniprotkb": "ndhL; CRR23; F15H11.1; F5A18.6; NDH-L", "gene_names_refseq": "CHLORORESPIRATORY REDUCTION 23; CRR23; F5A18.6; F5A18_6; NADH dehydrogenase-like complex L; NdhL", "protein_names_uniprotkb": "NAD(P)H-quinone oxidoreductase subunit L, chloroplastic; 7.1.1.-; NAD(P)H dehydrogenase subunit L; NADH-plastoquinone oxidoreductase subunit L; NDH subunit L; NDH-L; Protein CHLORORESPIRATORY REDUCTION 23", "protein_names_refseq": "inorganic carbon transport protein-like protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G70760)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "11130712;18388109;19995722;21029720;21785130;27862469", "class_list": "", "function": "NDH shuttles electrons from NAD(P)H:plastoquinone, via FMN and iron-sulfur (Fe-S) centers, to quinones in the photosynthetic chain and possibly in a chloroplast respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient., [UniProtKB]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "Q0WMK1;Q9SSL2", "ec_number_list": [ { "id": "7.1.1.-", "url": "https://www.rhea-db.org/rhea/?query=ec:7.1.1.-", "type": "external" } ], "go_molecular_function": "GO:0048038 quinone binding;GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor", "go_cellular_component": "GO:0009535 chloroplast thylakoid membrane;GO:0009507 chloroplast;GO:0010598 NAD(P)H dehydrogenase complex (plastoquinone);GO:0042651 thylakoid membrane", "go_biological_process": "GO:0009773 photosynthetic electron transport in photosystem I;GO:0010258 NADH dehydrogenase complex (plastoquinone) assembly", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q9CAC5-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9CAD5-1", "uniprot_id": [ { "id": "YODA_ARATH", "url": "https://www.uniprot.org/uniprot/Q9CAD5", "type": "external" } ], "mass": 95935.0, "length": 883, "protein_name": "Mitogen-activated protein kinase kinase kinase YODA", "gene_name": "YDA", "organism": "Arabidopsis", "refseq_name": "Protein kinase superfamily protein", "refseq_ac": [ { "id": "NP_001319310", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001319310", "type": "external" } ], "gene_names_uniprotkb": "YDA; F24D7.11", "gene_names_refseq": "EMB71; EMBRYO DEFECTIVE 71; F24D7.11; F24D7_11; MAP KINASE KINASE KINASE 4; MAPKKK4; YDA; YODA", "protein_names_uniprotkb": "Mitogen-activated protein kinase kinase kinase YODA; 2.7.11.25; YODA MAPKK kinase", "protein_names_refseq": "Protein kinase superfamily protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT1G63700)", "pathway_count": 1, "publication_count": 19, "publication_id_list": "11130712;14718171;15178800;17259259;19286558;22074104;22307275;23111157;23263767;23328941;23572148;25561503;25843888;27746029;27862469;28011693;28821747;29654922;30833711", "class_list": "", "function": "Functions in a MAP kinase cascade that acts as a molecular switch to regulate the first cell fate decisions in the zygote and the early embryo. Promotes elongation of the zygote and development of its basal daughter cell into the extra-embryonic suspensor. In stomatal development, acts downstream of the LRR receptor TMM, but upstream of the MKK4/MKK5-MPK3/MPK6 module to regulate stomatal cell fate before the guard mother cell (GMC) is specified. Plays a central role in both guard cell identity and pattern formation. This MAPK cascade also functions downstream of the ER receptor in regulating coordinated local cell proliferation, which shapes the morphology of plant organs. Upon brassinosteroid signaling, is inhibited by phosphorylation of its auto-inhibitory N-terminal domain by the GSK3-like kinase ASK7., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 23, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q6UY78", "ec_number_list": [ { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.3.2.27", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.2.27", "type": "external" }, { "id": "2.7.10.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.-", "type": "external" }, { "id": "3.1.4.46", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.4.46", "type": "external" }, { "id": "2.7.11.25", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.25", "type": "external" }, { "id": "2.7.11.22", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.22", "type": "external" }, { "id": "2.7.10.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.1", "type": "external" }, { "id": "2.7.11.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.-", "type": "external" }, { "id": "2.7.11.24", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.24", "type": "external" }, { "id": "2.7.12.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.1", "type": "external" }, { "id": "2.7.11.23", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.23", "type": "external" }, { "id": "2.7.12.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.2", "type": "external" }, { "id": "2.7.-.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.-.-", "type": "external" }, { "id": "3.1.26.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.26.-", "type": "external" }, { "id": "3.1.3.16", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.16", "type": "external" }, { "id": "2.7.11.34", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.34", "type": "external" }, { "id": "4.6.1.2", "url": "https://www.rhea-db.org/rhea/?query=ec:4.6.1.2", "type": "external" } ], "go_molecular_function": "GO:0005524 ATP binding;GO:0004709 MAP kinase kinase kinase activity;GO:0106310 protein serine kinase activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005886 plasma membrane;GO:0005938 cell cortex", "go_biological_process": "GO:0000165 MAPK cascade;GO:0010098 suspensor development;GO:0010103 stomatal complex morphogenesis;GO:0010229 inflorescence development", "synthesized_glycan_count": 0, "hit_score": 2.0, "record_id": "Q9CAD5-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9FDX1-1", "uniprot_id": [ { "id": "SKIP1_ARATH", "url": "https://www.uniprot.org/uniprot/Q9FDX1", "type": "external" } ], "mass": 34565.0, "length": 300, "protein_name": "F-box protein SKIP1", "gene_name": "SKIP1", "organism": "Arabidopsis", "refseq_name": "SKP1 interacting partner 1", "refseq_ac": [ { "id": "NP_568870", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_568870", "type": "external" } ], "gene_names_uniprotkb": "SKIP1; MTI20.16", "gene_names_refseq": "MTI20.16; MTI20_16; SKIP1; SKP1 interacting partner 1", "protein_names_uniprotkb": "F-box protein SKIP1; SKP1-interacting partner 1", "protein_names_refseq": "SKP1 interacting partner 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G57900)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "11387208;12795696;27862469;9734815", "class_list": "", "function": "Component of SCF(ASK-cullin-F-box) E3 ubiquitin ligase complexes, which may mediate the ubiquitination and subsequent proteasomal degradation of target proteins., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005634 nucleus;GO:0019005 SCF ubiquitin ligase complex", "go_biological_process": "GO:0016567 protein ubiquitination;GO:0031146 SCF-dependent proteasomal ubiquitin-dependent protein catabolic process", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "Q9FDX1-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9FDX9-1", "uniprot_id": [ { "id": "GG1_ARATH", "url": "https://www.uniprot.org/uniprot/Q9FDX9", "type": "external" } ], "mass": 10947.0, "length": 98, "protein_name": "Guanine nucleotide-binding protein subunit gamma 1", "gene_name": "GG1", "organism": "Arabidopsis", "refseq_name": "Ggamma-subunit 1", "refseq_ac": [ { "id": "NP_001325615", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001325615", "type": "external" } ], "gene_names_uniprotkb": "GG1; AGG1; MAA21.50", "gene_names_refseq": "AGG1; ATAGG1; GG1; Ggamma-subunit 1; HETEROTRIMERIC G PROTEIN GAMMA-SUBUNIT", "protein_names_uniprotkb": "Guanine nucleotide-binding protein subunit gamma 1; AtAGG1; Ggamma-subunit 1; Heterotrimeric G protein gamma-subunit 1", "protein_names_refseq": "Ggamma-subunit 1", "tax_id": 3702, "disease": "", "pathway": " (ath:AT3G63420)", "pathway_count": 1, "publication_count": 14, "publication_id_list": "11121078;11130713;17158913;17220359;17383830;17468261;17644812;18441222;19948787;20862254;21980142;22068106;22209167;27862469", "class_list": "", "function": "Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction. Involved in the abscisic acid (ABA) and ethylene signaling pathways. Regulates acropetal transport of auxin (IAA) in roots and hypocotyls, and thus modulates root architecture (e.g. lateral root formation). The heterotrimeric G protein controls defense responses to necrotrophic and vascular fungi probably by modulating cell wall-related genes expression; involved in resistance to fungal pathogens such as Alternaria brassicicola, Plectosphaerella cucumerina and Fusarium oxysporum., [UniProtKB, PubMed, PubMed, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 3, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9LY73", "ec_number_list": [], "go_molecular_function": "GO:0005525 GTP binding", "go_cellular_component": "GO:0000139 Golgi membrane;GO:0005737 cytoplasm;GO:0005739 mitochondrion;GO:0005794 Golgi apparatus;GO:0005886 plasma membrane", "go_biological_process": "GO:0007186 G protein-coupled receptor signaling pathway;GO:0050832 defense response to fungus;GO:0018345 protein palmitoylation;GO:0018342 protein prenylation;GO:0009845 seed germination", "synthesized_glycan_count": 0, "hit_score": 1.5, "record_id": "Q9FDX9-1", "record_type": "protein", "filter_code": "0000000.0100101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9FE83-1", "uniprot_id": [ { "id": "SKIP2_ARATH", "url": "https://www.uniprot.org/uniprot/Q9FE83", "type": "external" } ], "mass": 57393.0, "length": 527, "protein_name": "F-box protein SKIP2", "gene_name": "SKIP2", "organism": "Arabidopsis", "refseq_name": "SKP1/ASK1-interacting protein 2", "refseq_ac": [ { "id": "NP_569047", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_569047", "type": "external" } ], "gene_names_uniprotkb": "SKIP2; K21H1.21", "gene_names_refseq": "K21H1.6; K21H1_6; SKIP2; SKP1/ASK1-interacting protein 2; VFB4; VIER F-BOX PROTEINE 4", "protein_names_uniprotkb": "F-box protein SKIP2; SKP1-interacting partner 2", "protein_names_refseq": "SKP1/ASK1-interacting protein 2", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G67250)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "10718197;11387208;12169662;14593172;27862469", "class_list": "", "function": "Component of SCF(ASK-cullin-F-box) E3 ubiquitin ligase complexes, which may mediate the ubiquitination and subsequent proteasomal degradation of target proteins., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q0WWL1;Q940A1", "ec_number_list": [], "go_molecular_function": "GO:0004842 ubiquitin-protein transferase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0019005 SCF ubiquitin ligase complex", "go_biological_process": "GO:0016567 protein ubiquitination;GO:0031146 SCF-dependent proteasomal ubiquitin-dependent protein catabolic process", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q9FE83-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9FEE2-1", "uniprot_id": [ { "id": "TON2_ARATH", "url": "https://www.uniprot.org/uniprot/Q9FEE2", "type": "external" } ], "mass": 55070.0, "length": 480, "protein_name": "Probable serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit TON2", "gene_name": "TON2", "organism": "Arabidopsis", "refseq_name": "tonneau 2 (TON2)", "refseq_ac": [ { "id": "NP_568364", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_568364", "type": "external" } ], "gene_names_uniprotkb": "TON2; EMB40; FASS1; FASS2; FASS; FS1; GDO; T28N17", "gene_names_refseq": "EMB40; EMBRYO DEFECTIVE 40; FASS 1; FASS 2; FASS; FS1; GDO; GORDO; T28N17.60; T28N17_60; TON2; TONNEAU 2", "protein_names_uniprotkb": "Probable serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit TON2; Protein EMBRYO DEFFECTIVE 40; Protein GORDO; Protein TONNEAU 2", "protein_names_refseq": "tonneau 2 (TON2)", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G18580)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "11130714;11971138;14593172;22395485;25561503;27862469;29654922", "class_list": "", "function": "Probable regulatory subunit of type 2A protein phosphatase involved in the control of the dynamic organization of the cortical cytoskeleton. Plays an important role in the organization of interphase microtubule arrays in part through the regulation of nucleation geometry. Required for the reorganization of cortical arrays in response to light., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 3, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0005509 calcium ion binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005819 spindle;GO:0009524 phragmoplast", "go_biological_process": "GO:0035303 regulation of dephosphorylation;GO:0000226 microtubule cytoskeleton organization;GO:0030865 cortical cytoskeleton organization;GO:0009826 unidimensional cell growth;GO:0000913 preprophase band assembly", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q9FEE2-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9FG24-1", "uniprot_id": [ { "id": "SRF2_ARATH", "url": "https://www.uniprot.org/uniprot/Q9FG24", "type": "external" } ], "mass": 81299.0, "length": 735, "protein_name": "Protein STRUBBELIG-RECEPTOR FAMILY 2", "gene_name": "SRF2", "organism": "Arabidopsis", "refseq_name": "STRUBBELIG-receptor family 2", "refseq_ac": [ { "id": "NP_196300", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_196300", "type": "external" } ], "gene_names_uniprotkb": "SRF2; MPH15.19", "gene_names_refseq": "MPH15.19; MPH15_19; SRF2; STRUBBELIG-receptor family 2", "protein_names_uniprotkb": "Protein STRUBBELIG-RECEPTOR FAMILY 2; Leucine-rich repeat receptor kinase-like protein SRF2", "protein_names_refseq": "STRUBBELIG-receptor family 2", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G06820)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "17397538;27862469", "class_list": "", "function": "", "predicted_glycosites": 6, "predicted_n_glycosites": 6, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 6, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0004672 protein kinase activity;GO:0005524 ATP binding;GO:0042802 identical protein binding", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "GO:0007165 signal transduction", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "Q9FG24-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000010000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9FG74-1", "uniprot_id": [ { "id": "D6PK_ARATH", "url": "https://www.uniprot.org/uniprot/Q9FG74", "type": "external" } ], "mass": 54816.0, "length": 498, "protein_name": "Serine/threonine-protein kinase D6PK", "gene_name": "D6PK", "organism": "Arabidopsis", "refseq_name": "D6 protein kinase", "refseq_ac": [ { "id": "NP_001332267", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001332267", "type": "external" } ], "gene_names_uniprotkb": "D6PK; MYN21.2; PK64", "gene_names_refseq": "D6 protein kinase; D6PK; MYN21.2; MYN21_2", "protein_names_uniprotkb": "Serine/threonine-protein kinase D6PK; 2.7.11.1; AtPK64; D6 protein kinase; Serine/threonine-protein kinase 64; Serine/threonine-protein kinase AGC1-1", "protein_names_refseq": "D6 protein kinase", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G55910)", "pathway_count": 1, "publication_count": 15, "publication_id_list": "14749726;1558955;19168677;23111157;23172892;23572148;23709629;23776212;24043427;24601666;27251533;27862469;29167316;30833711;33705718", "class_list": "", "function": "Protein kinase that regulates the auxin transport activity of PIN auxin efflux facilitators by direct phosphorylation. D6PK-mediated PIN phosphorylation promotes auxin transport in the hypocotyl and this is a prerequisite for PHOT1-dependent hypocotyl bending. Phosphorylates PIN1, PIN2, PIN3, PIN4 and PIN7 in vitro and PIN1 in vivo. Phosphorylates PIN proteins (e.g. PIN1 and PIN2), especially when NPY proteins (e.g. NPY1/MAB4 and NPY5/MEL1) are recruited at the plasma membrane; this enhances the polarized localizations (apical or basal) of PINs in the cell by limiting their lateral diffusion-based escape (PubMed:33705718). Acts as a lipid domain-dependent mediator of root epidermal planar polarity via the binding to phosphatidylinositol phosphates (e.g. PtdIns(3)P, PtdIns(4)P, PtdIns(5)P, PtdIns(3,5)P(2), PtdIns(4,5)P(2), PtdIns(3,4,5)P(3) and phosphatidic acid) (PubMed:27251533)., [UniProtKB, PubMed, PubMed, PubMed, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "Q39031", "ec_number_list": [ { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.3.2.27", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.2.27", "type": "external" }, { "id": "2.7.10.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.-", "type": "external" }, { "id": "3.1.4.46", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.4.46", "type": "external" }, { "id": "2.7.11.25", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.25", "type": "external" }, { "id": "2.7.11.22", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.22", "type": "external" }, { "id": "2.7.10.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.1", "type": "external" }, { "id": "2.7.11.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.-", "type": "external" }, { "id": "2.7.11.24", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.24", "type": "external" }, { "id": "2.7.12.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.1", "type": "external" }, { "id": "2.7.11.23", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.23", "type": "external" }, { "id": "2.7.12.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.2", "type": "external" }, { "id": "2.7.-.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.-.-", "type": "external" }, { "id": "3.1.26.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.26.-", "type": "external" }, { "id": "3.1.3.16", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.16", "type": "external" }, { "id": "2.7.11.34", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.34", "type": "external" }, { "id": "4.6.1.2", "url": "https://www.rhea-db.org/rhea/?query=ec:4.6.1.2", "type": "external" } ], "go_molecular_function": "GO:0010314 phosphatidylinositol-5-phosphate binding;GO:0004672 protein kinase activity;GO:0004674 protein serine/threonine kinase activity;GO:0005524 ATP binding;GO:0005546 phosphatidylinositol-4,5-bisphosphate binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005886 plasma membrane;GO:0045178 basal part of cell;GO:0071944 cell periphery", "go_biological_process": "GO:0006468 protein phosphorylation;GO:2000114 regulation of establishment of cell polarity;GO:0009630 gravitropism;GO:0009638 phototropism;GO:0009734 auxin-activated signaling pathway", "synthesized_glycan_count": 0, "hit_score": 1.6, "record_id": "Q9FG74-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000001001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9FGJ3-1", "uniprot_id": [ { "id": "NFYB2_ARATH", "url": "https://www.uniprot.org/uniprot/Q9FGJ3", "type": "external" } ], "mass": 20529.0, "length": 190, "protein_name": "Nuclear transcription factor Y subunit B-2", "gene_name": "NFYB2", "organism": "Arabidopsis", "refseq_name": "nuclear factor Y, subunit B2", "refseq_ac": [ { "id": "NP_199575", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_199575", "type": "external" } ], "gene_names_uniprotkb": "NFYB2; HAP3B; MNJ7.23", "gene_names_refseq": "''nuclear factor Y; MNJ7.23; MNJ7_23; NF-YB2; nuclear factor Y; subunit B2''; subunit B2", "protein_names_uniprotkb": "Nuclear transcription factor Y subunit B-2; AtNF-YB-2; AtNF-YB2; Transcriptional activator HAP3B", "protein_names_refseq": "nuclear factor Y, subunit B2", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G47640)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "10929106;11250072;11867211;14593172;25490919;25561503;27862469;28119722;33098724;9662544", "class_list": "", "function": "Component of the NF-Y/HAP transcription factor complex (By similarity). The NF-Y complex stimulates the transcription of various genes by recognizing and binding to a CCAAT motif in promoters (By similarity)., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 3, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "O23634;Q9FV58", "ec_number_list": [], "go_molecular_function": "GO:0003700 DNA-binding transcription factor activity;GO:0046982 protein heterodimerization activity;GO:0000976 transcription cis-regulatory region binding;GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific;GO:0001228 DNA-binding transcription activator activity, RNA polymerase II-specific", "go_cellular_component": "GO:0005634 nucleus;GO:0016602 CCAAT-binding factor complex;GO:0009536 plastid", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006357 regulation of transcription by RNA polymerase II;GO:0009414 response to water deprivation;GO:0048574 long-day photoperiodism, flowering", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "Q9FGJ3-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9FHK4-1", "uniprot_id": [ { "id": "EDR4_ARATH", "url": "https://www.uniprot.org/uniprot/Q9FHK4", "type": "external" } ], "mass": 68351.0, "length": 615, "protein_name": "Protein ENHANCED DISEASE RESISTANCE 4", "gene_name": "EDR4", "organism": "Arabidopsis", "refseq_name": "hypothetical protein (DUF3133)", "refseq_ac": [ { "id": "NP_196138", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_196138", "type": "external" } ], "gene_names_uniprotkb": "EDR4; K2A11.6; Y-1", "gene_names_refseq": "K2A11.6; K2A11_6", "protein_names_uniprotkb": "Protein ENHANCED DISEASE RESISTANCE 4", "protein_names_refseq": "hypothetical protein (DUF3133)", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G05190)", "pathway_count": 1, "publication_count": 11, "publication_id_list": "10470850;14593172;15618630;23111157;25561503;25747881;27419465;27862469;28011693;29654922;30833711", "class_list": "", "function": "Plays a negative role in salicylic acid (SA)-mediated resistance to powdery mildew (e.g. Golovinomyces cichoracearum). May modulate plant immunity by regulating the relocation of EDR1 by interacting with CHC2 and modulating endocytosis., [UniProtKB, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 11, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005634 nucleus;GO:0005768 endosome;GO:0005886 plasma membrane", "go_biological_process": "GO:0006897 endocytosis;GO:0006952 defense response;GO:0030100 regulation of endocytosis;GO:0009620 response to fungus;GO:0009863 salicylic acid mediated signaling pathway", "synthesized_glycan_count": 0, "hit_score": 1.2, "record_id": "Q9FHK4-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000001001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9FII5-1", "uniprot_id": [ { "id": "TDR_ARATH", "url": "https://www.uniprot.org/uniprot/Q9FII5", "type": "external" } ], "mass": 114678.0, "length": 1041, "protein_name": "Leucine-rich repeat receptor-like protein kinase TDR", "gene_name": "TDR", "organism": "Arabidopsis", "refseq_name": "Leucine-rich repeat protein kinase family protein", "refseq_ac": [ { "id": "NP_200956", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_200956", "type": "external" } ], "gene_names_uniprotkb": "TDR; MCI2.4; PXY", "gene_names_refseq": "MCI2.4; MCI2_4; PHLOEM INTERCALATED WITH XYLEM; PXY; TDIF receptor; TDR", "protein_names_uniprotkb": "Leucine-rich repeat receptor-like protein kinase TDR; 2.7.11.1; AtTDR; Protein PHLOEM INTERCALATED WITH XYLEM; TDIF receptor; Tracheary element differentiation inhibitory factor receptor", "protein_names_refseq": "Leucine-rich repeat protein kinase family protein", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G61480)", "pathway_count": 1, "publication_count": 11, "publication_id_list": "10048488;17570668;18812507;20016993;20064227;26863186;27055373;27449136;27498761;27862469;9734815", "class_list": "", "function": "Acts with CLE41p and CLE44p peptides as a ligand-receptor pair in a signal transduction pathway involved in the regulation of procambium maintenance and polarity during vascular-tissue development (PubMed:17570668, PubMed:18812507, PubMed:27055373). Mediates repression of tracheary element differentiation and the promotion of procambial cells formation and polar division adjacent to phloem cells in the veins (PubMed:17570668, PubMed:18812507, PubMed:27055373)., [UniProtKB, PubMed, PubMed, PubMed]", "predicted_glycosites": 4, "predicted_n_glycosites": 4, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 11, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 11, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 11, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 7, "reported_mutagensis": 11, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 15, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [ { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.3.2.27", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.2.27", "type": "external" }, { "id": "2.7.10.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.-", "type": "external" }, { "id": "3.1.4.46", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.4.46", "type": "external" }, { "id": "2.7.11.25", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.25", "type": "external" }, { "id": "2.7.11.22", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.22", "type": "external" }, { "id": "2.7.10.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.1", "type": "external" }, { "id": "2.7.11.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.-", "type": "external" }, { "id": "2.7.11.24", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.24", "type": "external" }, { "id": "2.7.12.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.1", "type": "external" }, { "id": "2.7.11.23", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.23", "type": "external" }, { "id": "2.7.12.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.2", "type": "external" }, { "id": "2.7.-.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.-.-", "type": "external" }, { "id": "3.1.26.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.26.-", "type": "external" }, { "id": "3.1.3.16", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.16", "type": "external" }, { "id": "2.7.11.34", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.34", "type": "external" }, { "id": "4.6.1.2", "url": "https://www.rhea-db.org/rhea/?query=ec:4.6.1.2", "type": "external" } ], "go_molecular_function": "GO:0004672 protein kinase activity;GO:0004674 protein serine/threonine kinase activity;GO:0005524 ATP binding;GO:0106310 protein serine kinase activity", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "GO:0051301 cell division;GO:0010087 phloem or xylem histogenesis;GO:0010067 procambium histogenesis;GO:0010089 xylem development;GO:0010223 secondary shoot formation", "synthesized_glycan_count": 0, "hit_score": 2.3, "record_id": "Q9FII5-1", "record_type": "protein", "filter_code": "0000000.0100101.010000.100000000000000000.1000000010001.101.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9FIR9-1", "uniprot_id": [ { "id": "LSU2_ARATH", "url": "https://www.uniprot.org/uniprot/Q9FIR9", "type": "external" } ], "mass": 10679.0, "length": 94, "protein_name": "Protein RESPONSE TO LOW SULFUR 2", "gene_name": "LSU2", "organism": "Arabidopsis", "refseq_name": "response to low sulfur 2", "refseq_ac": [ { "id": "NP_197854", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_197854", "type": "external" } ], "gene_names_uniprotkb": "LSU2; END6; MXC17.2", "gene_names_refseq": "LSU2; MXC17.2; MXC17_2; RESPONSE TO LOW SULFUR 2", "protein_names_uniprotkb": "Protein RESPONSE TO LOW SULFUR 2; Protein ENHANCED DE-ETIOLATION 6", "protein_names_refseq": "response to low sulfur 2", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G24660)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "10048488;11910074;14593172;15842617;21798943;22383539;23517122;25628631;27862469", "class_list": "", "function": "May be involved in defense responses monitoring (PubMed:21798943). Probably implicated into osmotic stress signaling (PubMed:23517122)., [UniProtKB, PubMed, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005739 mitochondrion;GO:0009507 chloroplast", "go_biological_process": "GO:0045893 positive regulation of DNA-templated transcription;GO:0009651 response to salt stress;GO:0042742 defense response to bacterium;GO:0098869 cellular oxidant detoxification;GO:0047484 regulation of response to osmotic stress", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "Q9FIR9-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q9FJ49-1", "uniprot_id": [ { "id": "PYL12_ARATH", "url": "https://www.uniprot.org/uniprot/Q9FJ49", "type": "external" } ], "mass": 17633.0, "length": 159, "protein_name": "Abscisic acid receptor PYL12", "gene_name": "PYL12", "organism": "Arabidopsis", "refseq_name": "PYR1-like 12", "refseq_ac": [ { "id": "NP_199399", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_199399", "type": "external" } ], "gene_names_uniprotkb": "PYL12; K15I22.7; RCAR6", "gene_names_refseq": "K15I22.7; K15I22_7; PYL12; PYR1-like 12; RCAR6; regulatory components of ABA receptor 6", "protein_names_uniprotkb": "Abscisic acid receptor PYL12; PYR1-like protein 12; Regulatory components of ABA receptor 6", "protein_names_refseq": "PYR1-like 12", "tax_id": 3702, "disease": "", "pathway": " (ath:AT5G45870)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "10048488;19407142;19407143;23844015;27862469", "class_list": "", "function": "Receptor for abscisic acid (ABA) required for ABA-mediated responses such as stomatal closure and germination inhibition. Inhibits the activity of group-A protein phosphatases type 2C (PP2Cs) when activated by ABA., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0042803 protein homodimerization activity;GO:0004864 protein phosphatase inhibitor activity;GO:0038023 signaling receptor activity;GO:0010427 abscisic acid binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005886 plasma membrane", "go_biological_process": "GO:0009738 abscisic acid-activated signaling pathway", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q9FJ49-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.100000000000000000.0000000000000.000.00000", "kg_view_protein": true } ]