[ { "uniprot_canonical_ac": "A0A8M3ASA9-1", "uniprot_id": [ { "id": "A0A8M3ASA9_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3ASA9", "type": "external" } ], "mass": 231447.0, "length": 2095, "protein_name": "Kinesin-like protein KIF13B isoform X1", "gene_name": "kif13bb", "organism": "Zebrafish", "refseq_name": "kinesin-like protein KIF13B isoform X1", "refseq_ac": [ { "id": "XP_009299747", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009299747", "type": "external" } ], "gene_names_uniprotkb": "kif13bb", "gene_names_refseq": "kif13bb", "protein_names_uniprotkb": "Kinesin-like protein KIF13B isoform X1", "protein_names_refseq": "kinesin-like protein KIF13B isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:100317281)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133195) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0005524 ATP binding;GO:0008017 microtubule binding;GO:0003777 microtubule motor activity;GO:0016887 ATP hydrolysis activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005874 microtubule;GO:0005871 kinesin complex", "go_biological_process": "GO:0048731 system development;GO:0045184 establishment of protein localization;GO:0007018 microtubule-based movement", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3ASA9-1", "record_type": "protein", "filter_code": "0000000.0000001.010000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3AQI5-1", "uniprot_id": [ { "id": "A0A8M3AQI5_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3AQI5", "type": "external" } ], "mass": 321161.0, "length": 2900, "protein_name": "Nucleosome-remodeling factor subunit BPTF isoform X1", "gene_name": "bptf", "organism": "Zebrafish", "refseq_name": "nucleosome-remodeling factor subunit BPTF isoform X1", "refseq_ac": [ { "id": "XP_009297692", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009297692", "type": "external" } ], "gene_names_uniprotkb": "bptf", "gene_names_refseq": "bptf", "protein_names_uniprotkb": "Nucleosome-remodeling factor subunit BPTF isoform X1", "protein_names_refseq": "nucleosome-remodeling factor subunit BPTF isoform X1", "tax_id": 7955, "disease": "alcohol dependence (Disease Ontology:DOID:0050741); neurodevelopmental disorder with dysmorphic facies and distal limb anomalies (Disease Ontology:DOID:0070514); Alzheimer's disease (Disease Ontology:DOID:10652); amyotrophic lateral sclerosis (Disease Ontology:DOID:332); Kaposi's sarcoma (Disease Ontology:DOID:8632)", "pathway": " (dre:324479)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133178) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 3, "predicted_n_glycosites": 0, "predicted_o_glycosites": 3, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 5, "glyco_site_count": 3, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0008270 zinc ion binding;GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding;GO:0140751 histone octamer slider activity;GO:0003677 DNA binding", "go_cellular_component": "GO:0016589 NURF complex", "go_biological_process": "GO:1904888 cranial skeletal system development;GO:0006351 DNA-templated transcription;GO:0006357 regulation of transcription by RNA polymerase II;GO:0045944 positive regulation of transcription by RNA polymerase II;GO:0045892 negative regulation of DNA-templated transcription", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3AQI5-1", "record_type": "protein", "filter_code": "0000000.0000011.001000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3ARM5-1", "uniprot_id": [ { "id": "A0A8M3ARM5_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3ARM5", "type": "external" } ], "mass": 124097.0, "length": 1092, "protein_name": "Voltage-dependent calcium channel subunit alpha-2/delta-1a isoform X1", "gene_name": "cacna2d1a", "organism": "Zebrafish", "refseq_name": "voltage-dependent calcium channel subunit alpha-2/delta-1a isoform X1", "refseq_ac": [ { "id": "XP_009298561", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009298561", "type": "external" } ], "gene_names_uniprotkb": "cacna2d1a; si:ch211-251k4.1", "gene_names_refseq": "cacna2d1a; si:ch211-251k4.1", "protein_names_uniprotkb": "Voltage-dependent calcium channel subunit alpha-2/delta-1a isoform X1", "protein_names_refseq": "voltage-dependent calcium channel subunit alpha-2/delta-1a isoform X1", "tax_id": 7955, "disease": "nicotine dependence (Disease Ontology:DOID:0050742); developmental and epileptic encephalopathy 110 (Disease Ontology:DOID:0070395)", "pathway": " (dre:561434)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "23736855;26469318;27189481;27220618;28252024;38003559", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133179) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 2, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0005262 calcium channel activity;GO:0046872 metal ion binding", "go_cellular_component": "GO:0034702 monoatomic ion channel complex", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "A0A8M3ARM5-1", "record_type": "protein", "filter_code": "0000000.0000111.010000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A5WVT4-1", "uniprot_id": [ { "id": "A5WVT4_DANRE", "url": "https://www.uniprot.org/uniprot/A5WVT4", "type": "external" } ], "mass": 29533.0, "length": 263, "protein_name": "Phospholipid scramblase", "gene_name": "si:ch211-71m22.1", "organism": "Zebrafish", "refseq_name": "uncharacterized protein LOC100149582", "refseq_ac": [ { "id": "NP_001121867", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001121867", "type": "external" } ], "gene_names_uniprotkb": "si:ch211-71m22.1", "gene_names_refseq": "si:ch211-71m22.1", "protein_names_uniprotkb": "Phospholipid scramblase", "protein_names_refseq": "uncharacterized protein LOC100149582", "tax_id": 7955, "disease": "", "pathway": " (dre:100149582)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "22438865;24683187;25139857;26469318", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GFIL01036413.1, GDQH01008090.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## PREDICTED REFSEQ: This record has not been reviewed and the function is unknown. The reference sequence was derived from JBMGRA010000002.1. On Jul 31, 2008 this sequence version replaced XP_001923246.1., [RefSeq]; May mediate accelerated ATP-independent bidirectional transbilayer migration of phospholipids upon binding calcium ions that results in a loss of phospholipid asymmetry in the plasma membrane., [UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NI04", "ec_number_list": [], "go_molecular_function": "GO:0017128 phospholipid scramblase activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0016020 membrane;GO:0005886 plasma membrane", "go_biological_process": "GO:0060271 cilium assembly;GO:0044782 cilium organization;GO:0017121 plasma membrane phospholipid scrambling", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "A5WVT4-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "B0UYE9-1", "uniprot_id": [ { "id": "B0UYE9_DANRE", "url": "https://www.uniprot.org/uniprot/B0UYE9", "type": "external" } ], "mass": 98622.0, "length": 867, "protein_name": "GRIP1-associated protein 1", "gene_name": "gripap1", "organism": "Zebrafish", "refseq_name": "GRIP1-associated protein 1", "refseq_ac": [ { "id": "NP_001116792", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001116792", "type": "external" } ], "gene_names_uniprotkb": "gripap1; zgc:158787", "gene_names_refseq": "gripap1; zgc:158787", "protein_names_uniprotkb": "GRIP1-associated protein 1", "protein_names_refseq": "GRIP1-associated protein 1", "tax_id": 7955, "disease": "", "pathway": " (dre:791150)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "26469318;28252024", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GFIL01011986.1, SRR32588732.17115516.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA4476729, SAMEA4476730 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000008.1. On or before May 24, 2009 this sequence version replaced NP_001074101.1, XP_001336572.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8N1Z0U8", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0098978 glutamatergic synapse;GO:0098998 extrinsic component of postsynaptic early endosome membrane", "go_biological_process": "GO:0099152 regulation of neurotransmitter receptor transport, endosome to postsynaptic membrane;GO:0099158 regulation of recycling endosome localization within postsynapse", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "B0UYE9-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "B0UY57-1", "uniprot_id": [ { "id": "B0UY57_DANRE", "url": "https://www.uniprot.org/uniprot/B0UY57", "type": "external" } ], "mass": 261925.0, "length": 2392, "protein_name": "Telomere-associated protein RIF1 isoform X1", "gene_name": "rif1", "organism": "Zebrafish", "refseq_name": "telomere-associated protein RIF1 isoform X1", "refseq_ac": [ { "id": "XP_068079544", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_068079544", "type": "external" } ], "gene_names_uniprotkb": "rif1; fc38c03; si:dkey-89p3.2; wu:fc38c03", "gene_names_refseq": "fc38c03; rif1; si:dkey-89p3.2; wu:fc38c03", "protein_names_uniprotkb": "Telomere-associated protein RIF1 isoform X1", "protein_names_refseq": "telomere-associated protein RIF1 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:567001); (R-DRE-5693571)", "pathway_count": 2, "publication_count": 1, "publication_id_list": "15520368", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133184) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 2, "predicted_n_glycosites": 0, "predicted_o_glycosites": 2, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 2, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M2BF22", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005634 nucleus;GO:0000781 chromosome, telomeric region;GO:0140445 chromosome, telomeric repeat region", "go_biological_process": "GO:0000723 telomere maintenance", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "B0UY57-1", "record_type": "protein", "filter_code": "0000000.0000101.010000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3AQ65-1", "uniprot_id": [ { "id": "A0A8M3AQ65_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3AQ65", "type": "external" } ], "mass": 174861.0, "length": 1562, "protein_name": "Rho guanine nucleotide exchange factor TIAM1 isoform X1", "gene_name": "tiam1b", "organism": "Zebrafish", "refseq_name": "rho guanine nucleotide exchange factor TIAM1 isoform X1", "refseq_ac": [ { "id": "XP_009290217", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009290217", "type": "external" } ], "gene_names_uniprotkb": "tiam1b", "gene_names_refseq": "tiam1b", "protein_names_uniprotkb": "Rho guanine nucleotide exchange factor TIAM1 isoform X1", "protein_names_refseq": "rho guanine nucleotide exchange factor TIAM1 isoform X1", "tax_id": 7955, "disease": "cataract 48 (Disease Ontology:DOID:0070354); neurodevelopmental disorder with language delay and seizures (Disease Ontology:DOID:0070444)", "pathway": " (dre:100330358)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133190) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 2, "predicted_n_glycosites": 0, "predicted_o_glycosites": 2, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 2, "glyco_site_count": 2, "binding_glycan_count": 0, "secondary_ac_list": "E7F520", "ec_number_list": [], "go_molecular_function": "GO:0005085 guanyl-nucleotide exchange factor activity", "go_cellular_component": "GO:0005829 cytosol;GO:0005886 plasma membrane;GO:0045202 synapse", "go_biological_process": "GO:0007264 small GTPase-mediated signal transduction;GO:0050772 positive regulation of axonogenesis", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3AQ65-1", "record_type": "protein", "filter_code": "0000000.0000011.010000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3AQ99-1", "uniprot_id": [ { "id": "A0A8M3AQ99_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3AQ99", "type": "external" } ], "mass": 61399.0, "length": 568, "protein_name": "Uncharacterized protein isoform X1", "gene_name": "crtc1a", "organism": "Zebrafish", "refseq_name": "uncharacterized protein isoform X1", "refseq_ac": [ { "id": "XP_009297474", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009297474", "type": "external" } ], "gene_names_uniprotkb": "crtc1a; zgc:153637", "gene_names_refseq": "crtc1a; zgc:153637", "protein_names_uniprotkb": "Uncharacterized protein isoform X1", "protein_names_refseq": "uncharacterized protein isoform X1", "tax_id": 7955, "disease": "major depressive disorder (Disease Ontology:DOID:1470); middle cerebral artery infarction (Disease Ontology:DOID:3525)", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133177) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 2, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0008140 cAMP response element binding protein binding;GO:0003713 transcription coactivator activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0051289 protein homotetramerization;GO:0045944 positive regulation of transcription by RNA polymerase II;GO:0071320 cellular response to cAMP", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3AQ99-1", "record_type": "protein", "filter_code": "0000000.0000010.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3AS34-1", "uniprot_id": [ { "id": "A0A8M3AS34_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3AS34", "type": "external" } ], "mass": 24696.0, "length": 223, "protein_name": "Uncharacterized protein areg isoform X1", "gene_name": "areg", "organism": "Zebrafish", "refseq_name": "uncharacterized protein areg isoform X1", "refseq_ac": [ { "id": "XP_009299440", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009299440", "type": "external" } ], "gene_names_uniprotkb": "areg", "gene_names_refseq": "areg", "protein_names_uniprotkb": "Uncharacterized protein areg isoform X1", "protein_names_refseq": "uncharacterized protein areg isoform X1", "tax_id": 7955, "disease": "ductal carcinoma in situ (Disease Ontology:DOID:0060074); urinary bladder cancer (Disease Ontology:DOID:11054); breast cancer (Disease Ontology:DOID:1612); transitional cell carcinoma (Disease Ontology:DOID:2671); invasive ductal carcinoma (Disease Ontology:DOID:3008); high grade glioma (Disease Ontology:DOID:3070); prostate carcinoma in situ (Disease Ontology:DOID:8634)", "pathway": " (dre:101884611)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133180) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_009299440.2. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 7, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0AC58JNE9;A0AC58JNF5", "ec_number_list": [], "go_molecular_function": "GO:0008083 growth factor activity", "go_cellular_component": "GO:0016020 membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3AS34-1", "record_type": "protein", "filter_code": "0000000.0000011.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3ARK3-1", "uniprot_id": [ { "id": "A0A8M3ARK3_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3ARK3", "type": "external" } ], "mass": 179355.0, "length": 1643, "protein_name": "SH3 and multiple ankyrin repeat domains protein 3", "gene_name": "shank3b", "organism": "Zebrafish", "refseq_name": "SH3 and multiple ankyrin repeat domains protein 3 isoform X1", "refseq_ac": [ { "id": "XP_005164655", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005164655", "type": "external" } ], "gene_names_uniprotkb": "shank3b", "gene_names_refseq": "shank3b", "protein_names_uniprotkb": "SH3 and multiple ankyrin repeat domains protein 3; Proline-rich synapse-associated protein 2", "protein_names_refseq": "SH3 and multiple ankyrin repeat domains protein 3 isoform X1", "tax_id": 7955, "disease": "autism spectrum disorder (Disease Ontology:DOID:0060041); schizophrenia 15 (Disease Ontology:DOID:0070091); Phelan-McDermid syndrome (Disease Ontology:DOID:0080354); schizophrenia (Disease Ontology:DOID:5419)", "pathway": " (dre:566152)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133179) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 7, "predicted_n_glycosites": 0, "predicted_o_glycosites": 7, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 4, "glyco_site_count": 7, "binding_glycan_count": 0, "secondary_ac_list": "A0AC58J9H9", "ec_number_list": [], "go_molecular_function": "GO:0003779 actin binding;GO:0035255 ionotropic glutamate receptor binding;GO:0030160 synaptic receptor adaptor activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0014069 postsynaptic density;GO:0043197 dendritic spine", "go_biological_process": "GO:0120054 intestinal motility;GO:0008306 associative learning;GO:0050808 synapse organization", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3ARK3-1", "record_type": "protein", "filter_code": "0000000.0000011.010000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3AT27-1", "uniprot_id": [ { "id": "A0A8M3AT27_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3AT27", "type": "external" } ], "mass": 49288.0, "length": 443, "protein_name": "Coiled-coil domain containing 85A, like isoform X1", "gene_name": "ccdc85al", "organism": "Zebrafish", "refseq_name": "coiled-coil domain containing 85A, like isoform 2", "refseq_ac": [ { "id": "NP_001428974", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001428974", "type": "external" } ], "gene_names_uniprotkb": "ccdc85al; si:dkey-277e10.1; zgc:92780", "gene_names_refseq": "ccdc85al; si:dkey-277e10.1; zgc:92780", "protein_names_uniprotkb": "Coiled-coil domain containing 85A, like isoform X1", "protein_names_refseq": "coiled-coil domain containing 85A, like isoform 2", "tax_id": 7955, "disease": "", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: SRR32588719.1152141.1, SRR32588730.18578750.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000006.1. On Jul 21, 2025 this sequence version replaced XP_009300401.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005912 adherens junction", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3AT27-1", "record_type": "protein", "filter_code": "0000000.0000000.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "B8A4W8-1", "uniprot_id": [ { "id": "B8A4W8_DANRE", "url": "https://www.uniprot.org/uniprot/B8A4W8", "type": "external" } ], "mass": 48449.0, "length": 437, "protein_name": "pantothenate kinase", "gene_name": "pank2", "organism": "Zebrafish", "refseq_name": "pantothenate kinase 2, mitochondrial", "refseq_ac": [ { "id": "NP_001074075", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001074075", "type": "external" } ], "gene_names_uniprotkb": "pank2; zgc:158667", "gene_names_refseq": "pank2; zgc:158667", "protein_names_uniprotkb": "pantothenate kinase; 2.7.1.33", "protein_names_refseq": "pantothenate kinase 2, mitochondrial", "tax_id": 7955, "disease": "pantothenate kinase-associated neurodegeneration (Disease Ontology:DOID:3981)", "pathway": " (dre:570866); (R-DRE-196783)", "pathway_count": 2, "publication_count": 10, "publication_id_list": "15520368;26469318;26476142;27892483;28318412;30221726;32208220;32334837;33237527;36361705", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GDQH01015866.1, GDQQ01023691.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## ##RefSeq-Attributes-START## gene product(s) localized to mito. :: inferred from homology ##RefSeq-Attributes-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000013.1. On Aug 6, 2010 this sequence version replaced NP_001074075.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications., [RefSeq]; Abnormal Vasculature Development in Zebrafish Embryos with Reduced Expression of Pantothenate Kinase 2 Gene., [RefSeq, PubMed]; Catalyzes the phosphorylation of pantothenate to generate 4'-phosphopantothenate in the first and rate-determining step of coenzyme A (CoA) synthesis., [UniProtKB, UniProtKB, UniProtKB]; Study investigated the expression and function of pank2 during early stages of zebrafish development, [RefSeq, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NCT3", "ec_number_list": [ { "id": "2.7.1.33", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.33", "type": "external" } ], "go_molecular_function": "GO:0005524 ATP binding;GO:0016301 kinase activity;GO:0004594 pantothenate kinase activity", "go_cellular_component": "GO:0005829 cytosol;GO:0005634 nucleus", "go_biological_process": "GO:0007399 nervous system development;GO:0001944 vasculature development;GO:0015937 coenzyme A biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "B8A4W8-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "B8JJX2-1", "uniprot_id": [ { "id": "B8JJX2_DANRE", "url": "https://www.uniprot.org/uniprot/B8JJX2", "type": "external" } ], "mass": 78229.0, "length": 692, "protein_name": "Prolyl endopeptidase", "gene_name": "prepl", "organism": "Zebrafish", "refseq_name": "prolyl endopeptidase-like", "refseq_ac": [ { "id": "NP_001139088", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001139088", "type": "external" } ], "gene_names_uniprotkb": "prepl; si:dkey-202m23.1", "gene_names_refseq": "prepl; si:dkey-202m23.1", "protein_names_uniprotkb": "Prolyl endopeptidase; 3.4.21.-", "protein_names_refseq": "prolyl endopeptidase-like", "tax_id": 7955, "disease": "congenital myasthenic syndrome 22 (Disease Ontology:DOID:0080587)", "pathway": " (dre:796680)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "26034287;34338990", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: SRR32588732.29476907.1, SRR32588732.12482411.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505382, SAMEA3505392 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000013.1. On Mar 5, 2009 this sequence version replaced XP_001337056.2., [RefSeq]; Serine peptidase whose precise substrate specificity remains unclear. Does not cleave peptides after a arginine or lysine residue. Regulates trans-Golgi network morphology and sorting by regulating the membrane binding of the AP-1 complex. May play a role in the regulation of synaptic vesicle exocytosis., [UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NRM5", "ec_number_list": [], "go_molecular_function": "GO:0004252 serine-type endopeptidase activity", "go_cellular_component": "GO:0005829 cytosol;GO:0005794 Golgi apparatus;GO:0005856 cytoskeleton", "go_biological_process": "GO:0006508 proteolysis", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "B8JJX2-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "B8A4D7-1", "uniprot_id": [ { "id": "B8A4D7_DANRE", "url": "https://www.uniprot.org/uniprot/B8A4D7", "type": "external" } ], "mass": 145517.0, "length": 1336, "protein_name": "Ribosome-binding protein 1a", "gene_name": "rrbp1a", "organism": "Zebrafish", "refseq_name": "ribosome-binding protein 1a", "refseq_ac": [ { "id": "NP_001139027", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001139027", "type": "external" } ], "gene_names_uniprotkb": "rrbp1a; cb360; sb:cb360; si:dkey-76k16.7; wu:fa66b07; wu:fb58g03; zgc:171356", "gene_names_refseq": "cb360; rrbp1a; sb:cb360; si:dkey-76k16.7; wu:fa66b07; wu:fb58g03; zgc:171356", "protein_names_uniprotkb": "Ribosome-binding protein 1a", "protein_names_refseq": "ribosome binding protein 1 homolog a (dog); ribosome-binding protein 1a", "tax_id": 7955, "disease": "", "pathway": " (dre:553448)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "15520368;26469318;27069811;28252024;30446521;32064346;32467236;40044042", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GFIL01034088.1, SRR26395028.932249.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000013.1. On Mar 5, 2009 this sequence version replaced XP_694934.3., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 1, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 1, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 1, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 1, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 0, "biomarker_type": "", "glycan_count": 1, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NQ07", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005789 endoplasmic reticulum membrane", "go_biological_process": "GO:0015031 protein transport", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "B8A4D7-1", "record_type": "protein", "filter_code": "0000000.0000101.010000.000000000000000001.0100000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "B3DI94-1", "uniprot_id": [ { "id": "TM186_DANRE", "url": "https://www.uniprot.org/uniprot/B3DI94", "type": "external" } ], "mass": 25720.0, "length": 228, "protein_name": "Transmembrane protein 186", "gene_name": "tmem186", "organism": "Zebrafish", "refseq_name": "transmembrane protein 186", "refseq_ac": [ { "id": "NP_001129456", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001129456", "type": "external" } ], "gene_names_uniprotkb": "tmem186; im:7154698; zgc:194533; zgc:194539", "gene_names_refseq": "im:7154698; tmem186; zgc:194533; zgc:194539", "protein_names_uniprotkb": "Transmembrane protein 186", "protein_names_refseq": "transmembrane protein 186", "tax_id": 7955, "disease": "", "pathway": " (dre:799142); (R-DRE-611105); (R-DRE-6799198)", "pathway_count": 3, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC163045.1, CN014635.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA4476730, SAMEA4476731 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC163049.1., [RefSeq]; May be required for efficient assembly of the mitochondrial complex I., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005739 mitochondrion;GO:0005743 mitochondrial inner membrane", "go_biological_process": "GO:0032981 mitochondrial respiratory chain complex I assembly", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "B3DI94-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A5PM68-1", "uniprot_id": [ { "id": "A5PM68_DANRE", "url": "https://www.uniprot.org/uniprot/A5PM68", "type": "external" } ], "mass": 58127.0, "length": 538, "protein_name": "Polypyrimidine tract-binding protein 2b", "gene_name": "ptbp2b", "organism": "Zebrafish", "refseq_name": "polypyrimidine tract-binding protein 2b", "refseq_ac": [ { "id": "NP_001093477", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001093477", "type": "external" } ], "gene_names_uniprotkb": "ptbp2b; im:7153495; ptbp2; si:ch211-160l17.2; wu:fa08f05; wu:fc05d10", "gene_names_refseq": "im:7153495; ptbp2b; ptbp2; si:ch211-160l17.2; wu:fa08f05; wu:fc05d10", "protein_names_uniprotkb": "Polypyrimidine tract-binding protein 2b", "protein_names_refseq": "polypyrimidine tract binding protein 2; polypyrimidine tract-binding protein 2b", "tax_id": 7955, "disease": "", "pathway": " (dre:562434)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "18947383;22855693;24204288;25534026;26469318;27189481", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GFIL01031669.1, SRR26395014.759635.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000002.1. On Oct 4, 2007 this sequence version replaced XP_686978.2. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments., [RefSeq]; Two stretches of polypyrimidine tracts designated PPT1 and PPT2 which influence the IRES activity of cx55.5 protein were identified; deletion of PPT2 results in a complete loss of the IRES activity Publication Status: Online-Only, [RefSeq, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NDN2", "ec_number_list": [], "go_molecular_function": "GO:0003723 RNA binding;GO:0003729 mRNA binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006397 mRNA processing;GO:0043484 regulation of RNA splicing", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "A5PM68-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3AQR1-1", "uniprot_id": [ { "id": "A0A8M3AQR1_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3AQR1", "type": "external" } ], "mass": 61525.0, "length": 556, "protein_name": "Nuclear factor 1", "gene_name": "nfixb", "organism": "Zebrafish", "refseq_name": "nuclear factor I/Xb isoform X1", "refseq_ac": [ { "id": "XP_009297562", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009297562", "type": "external" } ], "gene_names_uniprotkb": "nfixb; zgc:136878", "gene_names_refseq": "nfixb; zgc:136878", "protein_names_uniprotkb": "Nuclear factor 1", "protein_names_refseq": "nuclear factor I/Xb isoform X1", "tax_id": 7955, "disease": "Marshall-Smith syndrome (Disease Ontology:DOID:0050858); Sotos syndrome 2 (Disease Ontology:DOID:0112102); Scheuermann's disease (Disease Ontology:DOID:13300)", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133178) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]; Recognizes and binds the palindromic sequence 5'-TTGGCNNNNNGCCAA-3' present in viral and cellular promoters and in the origin of replication of adenovirus type 2. These proteins are individually capable of activating transcription and replication., [UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 2, "predicted_n_glycosites": 0, "predicted_o_glycosites": 2, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 3, "glyco_site_count": 2, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0003677 DNA binding;GO:0003700 DNA-binding transcription factor activity", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006260 DNA replication;GO:0045893 positive regulation of DNA-templated transcription", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3AQR1-1", "record_type": "protein", "filter_code": "0000000.0000010.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3AQR0-1", "uniprot_id": [ { "id": "A0A8M3AQR0_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3AQR0", "type": "external" } ], "mass": 193935.0, "length": 1852, "protein_name": "Trinucleotide repeat-containing gene 6C protein", "gene_name": "tnrc6c1", "organism": "Zebrafish", "refseq_name": "trinucleotide repeat-containing gene 6C protein isoform X1", "refseq_ac": [ { "id": "XP_009297872", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009297872", "type": "external" } ], "gene_names_uniprotkb": "tnrc6c1", "gene_names_refseq": "tnrc6c1", "protein_names_uniprotkb": "Trinucleotide repeat-containing gene 6C protein", "protein_names_refseq": "trinucleotide repeat-containing gene 6C protein isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:560874)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133178) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 4, "predicted_n_glycosites": 0, "predicted_o_glycosites": 4, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 4, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0003723 RNA binding", "go_cellular_component": "GO:0005829 cytosol;GO:0005654 nucleoplasm;GO:0000932 P-body", "go_biological_process": "GO:0006417 regulation of translation;GO:0031047 regulatory ncRNA-mediated gene silencing;GO:0060213 positive regulation of nuclear-transcribed mRNA poly(A) tail shortening;GO:0035195 miRNA-mediated post-transcriptional gene silencing", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3AQR0-1", "record_type": "protein", "filter_code": "0000000.0000001.010000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "B0S6V7-1", "uniprot_id": [ { "id": "B0S6V7_DANRE", "url": "https://www.uniprot.org/uniprot/B0S6V7", "type": "external" } ], "mass": 83708.0, "length": 727, "protein_name": "Phosphatidylinositol 3-kinase regulatory subunit alpha", "gene_name": "pik3r1", "organism": "Zebrafish", "refseq_name": "phosphatidylinositol 3-kinase regulatory subunit alpha", "refseq_ac": [ { "id": "NP_001268773", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001268773", "type": "external" } ], "gene_names_uniprotkb": "pik3r1; wu:fb65b05", "gene_names_refseq": "pik3r1; wu:fb65b05", "protein_names_uniprotkb": "Phosphatidylinositol 3-kinase regulatory subunit alpha; Phosphatidylinositol 3-kinase 85 kDa regulatory subunit alpha", "protein_names_refseq": "phosphatidylinositol 3-kinase regulatory subunit alpha; phosphoinositide-3-kinase, regulatory subunit 1 (p85 alpha)", "tax_id": 7955, "disease": "agammaglobulinemia 7 (Disease Ontology:DOID:0081139); SHORT syndrome (Disease Ontology:DOID:0111454); immunodeficiency 36 (Disease Ontology:DOID:0111949); prostate cancer (Disease Ontology:DOID:10283); Alzheimer's disease (Disease Ontology:DOID:10652); portal hypertension (Disease Ontology:DOID:10762); hypertension (Disease Ontology:DOID:10763); endometrial cancer (Disease Ontology:DOID:1380); X-linked agammaglobulinemia (Disease Ontology:DOID:14179); endometrial adenocarcinoma (Disease Ontology:DOID:2870); endometrial carcinoma (Disease Ontology:DOID:2871); lung adenocarcinoma (Disease Ontology:DOID:3910); renal cell carcinoma (Disease Ontology:DOID:4450); lung small cell carcinoma (Disease Ontology:DOID:5409); hepatocellular carcinoma (Disease Ontology:DOID:684); rheumatoid arthritis (Disease Ontology:DOID:7148); astroblastoma (Disease Ontology:DOID:7305); osteoarthritis (Disease Ontology:DOID:8398); colorectal cancer (Disease Ontology:DOID:9256); type 2 diabetes mellitus (Disease Ontology:DOID:9352); obesity (Disease Ontology:DOID:9970)", "pathway": " (dre:557176); (R-DRE-109704); (R-DRE-112399); (R-DRE-114604); (R-DRE-1250342); (R-DRE-1257604); (R-DRE-1266695); (R-DRE-1433557); (R-DRE-1660499); (R-DRE-180292); (R-DRE-186763); (R-DRE-1963642); (R-DRE-198203); (R-DRE-201556); (R-DRE-210993); (R-DRE-389357); (R-DRE-416476); (R-DRE-4420097); (R-DRE-5654689); (R-DRE-5654695); (R-DRE-5654710); (R-DRE-5654720); (R-DRE-5673001); (R-DRE-6811558); (R-DRE-8851907); (R-DRE-8853659); (R-DRE-8980692); (R-DRE-9009391); (R-DRE-9013026); (R-DRE-9013106); (R-DRE-9013148); (R-DRE-9013149); (R-DRE-9013404); (R-DRE-9013408); (R-DRE-9013409); (R-DRE-9013420); (R-DRE-9013423); (R-DRE-9013424); (R-DRE-9027276); (R-DRE-9035034); (R-DRE-912631); (R-DRE-9607240); (R-DRE-9696264); (R-DRE-9696270); (R-DRE-9696273); (R-DRE-983695); (R-DRE-9842663)", "pathway_count": 47, "publication_count": 10, "publication_id_list": "19184727;22340502;22465374;24613413;25144531;38431221;38667765;39010883;39040253;39072972", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GFIL01030381.1, BC098589.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000005.1. On Aug 31, 2013 this sequence version replaced XP_683819.3. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 21, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1P036;E7FED3", "ec_number_list": [], "go_molecular_function": "GO:0005096 GTPase activator activity;GO:0046935 1-phosphatidylinositol-3-kinase regulator activity", "go_cellular_component": "GO:0005943 phosphatidylinositol 3-kinase complex, class IA", "go_biological_process": "GO:0008286 insulin receptor signaling pathway", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "B0S6V7-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3ASN6-1", "uniprot_id": [ { "id": "A0A8M3ASN6_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3ASN6", "type": "external" } ], "mass": 67829.0, "length": 577, "protein_name": "Caspase recruitment domain-containing protein 9 isoform X1", "gene_name": "card9", "organism": "Zebrafish", "refseq_name": "caspase recruitment domain-containing protein 9 isoform X1", "refseq_ac": [ { "id": "XP_009300061", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009300061", "type": "external" } ], "gene_names_uniprotkb": "card9; si:dkey-1o2.6", "gene_names_refseq": "card9; si:dkey-1o2.6", "protein_names_uniprotkb": "Caspase recruitment domain-containing protein 9 isoform X1", "protein_names_refseq": "caspase recruitment domain-containing protein 9 isoform X1", "tax_id": 7955, "disease": "primary immunodeficiency disease (Disease Ontology:DOID:612); retinal degeneration (Disease Ontology:DOID:8466)", "pathway": " (dre:796425)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "19699229;26469318;27356472;29980668;33161151;35079792;36516756", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133180) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 2, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0035591 signaling adaptor activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0032449 CBM complex", "go_biological_process": "GO:0042981 regulation of apoptotic process;GO:0007165 signal transduction;GO:0050776 regulation of immune response;GO:0043123 positive regulation of canonical NF-kappaB signal transduction", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "A0A8M3ASN6-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "B0S6H4-1", "uniprot_id": [ { "id": "B0S6H4_DANRE", "url": "https://www.uniprot.org/uniprot/B0S6H4", "type": "external" } ], "mass": 16622.0, "length": 153, "protein_name": "Proteolipid protein 2", "gene_name": "plp2b", "organism": "Zebrafish", "refseq_name": "proteolipid protein 2b", "refseq_ac": [ { "id": "NP_001154917", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001154917", "type": "external" } ], "gene_names_uniprotkb": "plp2b; fj47d05; plp2; wu:fj47d05", "gene_names_refseq": "fj47d05; plp2b; plp2; wu:fj47d05", "protein_names_uniprotkb": "Proteolipid protein 2", "protein_names_refseq": "proteolipid protein 2b; proteolipid protein 2", "tax_id": 7955, "disease": "", "pathway": " (dre:798079)", "pathway_count": 1, "publication_count": 3, "publication_id_list": "19158186;26469318;27189481", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC097119.1, GFIL01030742.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505377 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000008.1., [RefSeq]; May play a role in cell differentiation in the intestinal epithelium., [UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NRM3;E7F375", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0016020 membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "B0S6H4-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "B0S6F3-1", "uniprot_id": [ { "id": "B0S6F3_DANRE", "url": "https://www.uniprot.org/uniprot/B0S6F3", "type": "external" } ], "mass": 134679.0, "length": 1207, "protein_name": "RNA exonuclease 1 homolog", "gene_name": "rexo1", "organism": "Zebrafish", "refseq_name": "RNA exonuclease 1 homolog", "refseq_ac": [ { "id": "NP_001119888", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001119888", "type": "external" } ], "gene_names_uniprotkb": "rexo1; fb77b11; si:dkey-45m5.5; wu:fb77b11", "gene_names_refseq": "fb77b11; rexo1; si:dkey-45m5.5; wu:fb77b11", "protein_names_uniprotkb": "RNA exonuclease 1 homolog", "protein_names_refseq": "RNA exonuclease 1 homolog", "tax_id": 7955, "disease": "", "pathway": " (dre:564551)", "pathway_count": 1, "publication_count": 3, "publication_id_list": "26469318;27189481;35222539", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GDQH01014140.1, GFIL01032527.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA4476731, SAMEA4476732 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000008.1. On Jul 31, 2008 this sequence version replaced XP_692975.3., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NJD4", "ec_number_list": [], "go_molecular_function": "GO:0003676 nucleic acid binding;GO:0004527 exonuclease activity", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0031125 rRNA 3'-end processing", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "B0S6F3-1", "record_type": "protein", "filter_code": "0000000.0000101.010000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "B8JIS3-1", "uniprot_id": [ { "id": "B8JIS3_DANRE", "url": "https://www.uniprot.org/uniprot/B8JIS3", "type": "external" } ], "mass": 70846.0, "length": 628, "protein_name": "Epidermal growth factor receptor kinase substrate 8-like protein 3b", "gene_name": "eps8l3b", "organism": "Zebrafish", "refseq_name": "epidermal growth factor receptor kinase substrate 8-like protein 3b", "refseq_ac": [ { "id": "NP_001315008", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001315008", "type": "external" } ], "gene_names_uniprotkb": "eps8l3b; eps8l3; zgc:64011", "gene_names_refseq": "eps8l3b; eps8l3; zgc:64011", "protein_names_uniprotkb": "Epidermal growth factor receptor kinase substrate 8-like protein 3b", "protein_names_refseq": "EPS8-like 3b; EPS8-like 3; epidermal growth factor receptor kinase substrate 8-like protein 3b", "tax_id": 7955, "disease": "hypotrichosis 5 (Disease Ontology:DOID:0110702)", "pathway": " (dre:393332)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "15520368;25601102;26469318;29042681;31188030", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GDQH01006328.1, SRR32588718.5558616.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000008.1. On Jun 3, 2016 this sequence version replaced XP_005167076.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1P9W0", "ec_number_list": [], "go_molecular_function": "GO:0003779 actin binding", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005886 plasma membrane;GO:0032587 ruffle membrane", "go_biological_process": "GO:0007266 Rho protein signal transduction;GO:0035023 regulation of Rho protein signal transduction;GO:1900029 positive regulation of ruffle assembly", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "B8JIS3-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "B0UXR5-1", "uniprot_id": [ { "id": "B0UXR5_DANRE", "url": "https://www.uniprot.org/uniprot/B0UXR5", "type": "external" } ], "mass": 87046.0, "length": 778, "protein_name": "E3 ubiquitin-protein ligase RNF10", "gene_name": "rnf10", "organism": "Zebrafish", "refseq_name": "E3 ubiquitin-protein ligase RNF10", "refseq_ac": [ { "id": "NP_001116727", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001116727", "type": "external" } ], "gene_names_uniprotkb": "rnf10; fc22g07; si:ch211-15b7.3; wu:fc22g07", "gene_names_refseq": "fc22g07; rnf10; si:ch211-15b7.3; wu:fc22g07", "protein_names_uniprotkb": "E3 ubiquitin-protein ligase RNF10; 2.3.2.27; RING finger protein 10", "protein_names_refseq": "E3 ubiquitin-protein ligase RNF10", "tax_id": 7955, "disease": "", "pathway": " (dre:560444)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "26469318;31307377", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GDQH01001458.1, GDQQ01000767.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000008.1. On Apr 11, 2008 this sequence version replaced XP_688936.2., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NIH6", "ec_number_list": [], "go_molecular_function": "GO:0008270 zinc ion binding;GO:0061630 ubiquitin protein ligase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005829 cytosol", "go_biological_process": "GO:0045893 positive regulation of DNA-templated transcription;GO:1990116 ribosome-associated ubiquitin-dependent protein catabolic process;GO:0031643 positive regulation of myelination", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "B0UXR5-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "B8JJS7-1", "uniprot_id": [ { "id": "B8JJS7_DANRE", "url": "https://www.uniprot.org/uniprot/B8JJS7", "type": "external" } ], "mass": 55279.0, "length": 478, "protein_name": "Golgi integral membrane protein 4b", "gene_name": "golim4b", "organism": "Zebrafish", "refseq_name": "Golgi integral membrane protein 4b", "refseq_ac": [ { "id": "NP_001014371", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001014371", "type": "external" } ], "gene_names_uniprotkb": "golim4b; im:7146775; im:7156643; zgc:113641", "gene_names_refseq": "golim4b; im:7146775; im:7156643; zgc:113641", "protein_names_uniprotkb": "Golgi integral membrane protein 4b", "protein_names_refseq": "Golgi integral membrane protein 4b", "tax_id": 7955, "disease": "", "pathway": " (dre:541535)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "17715297;26469318;27189481;38605226", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC091983.1, GDQQ01041858.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA4476754, SAMEA4476759 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000002.1. On Mar 21, 2009 this sequence version replaced NP_001014371.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1N4M9", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0000139 Golgi membrane;GO:0005794 Golgi apparatus;GO:0016020 membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "B8JJS7-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "B0UYI0-1", "uniprot_id": [ { "id": "B0UYI0_DANRE", "url": "https://www.uniprot.org/uniprot/B0UYI0", "type": "external" } ], "mass": 61314.0, "length": 549, "protein_name": "non-specific serine/threonine protein kinase", "gene_name": "cdc7", "organism": "Zebrafish", "refseq_name": "cell division cycle 7-related protein kinase isoform X1", "refseq_ac": [ { "id": "XP_005171217", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005171217", "type": "external" } ], "gene_names_uniprotkb": "cdc7; im:7138214; zgc:101602", "gene_names_refseq": "cdc7; im:7138214; zgc:101602", "protein_names_uniprotkb": "non-specific serine/threonine protein kinase; 2.7.11.1", "protein_names_refseq": "cell division cycle 7-related protein kinase isoform X1", "tax_id": 7955, "disease": "", "pathway": " (R-DRE-68962)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133177) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M2BIF5", "ec_number_list": [ { "id": "3.6.4.12", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.4.12", "type": "external" }, { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.7.7.7", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.7.7", "type": "external" }, { "id": "5.6.2.4", "url": "https://www.rhea-db.org/rhea/?query=ec:5.6.2.4", "type": "external" } ], "go_molecular_function": "GO:0004674 protein serine/threonine kinase activity;GO:0005524 ATP binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm", "go_biological_process": "GO:0051301 cell division;GO:0007165 signal transduction;GO:0000727 double-strand break repair via break-induced replication", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "B0UYI0-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A5PMC4-1", "uniprot_id": [ { "id": "A5PMC4_DANRE", "url": "https://www.uniprot.org/uniprot/A5PMC4", "type": "external" } ], "mass": 40249.0, "length": 354, "protein_name": "Vesicular integral-membrane protein VIP36 precursor", "gene_name": "lman2", "organism": "Zebrafish", "refseq_name": "vesicular integral-membrane protein VIP36 precursor", "refseq_ac": [ { "id": "NP_001075216", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001075216", "type": "external" } ], "gene_names_uniprotkb": "lman2; wu:fb16f04; zgc:158761", "gene_names_refseq": "lman2; wu:fb16f04; zgc:158761", "protein_names_uniprotkb": "Vesicular integral-membrane protein VIP36 precursor", "protein_names_refseq": "vesicular integral-membrane protein VIP36 precursor", "tax_id": 7955, "disease": "", "pathway": " (dre:557960)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "21653807;22155693;26469318;27189481;28252024;29101780;34982026", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC133153.1, EH593516.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505383, SAMEA3505388 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from BX323077.15, BC133153.1 and EH442331.1. On Dec 5, 2008 this sequence version replaced NP_001075216.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NBX2", "ec_number_list": [], "go_molecular_function": "GO:0046872 metal ion binding;GO:0030246 carbohydrate binding;GO:0005537 D-mannose binding", "go_cellular_component": "GO:0000139 Golgi membrane;GO:0030134 COPII-coated ER to Golgi transport vesicle;GO:0005789 endoplasmic reticulum membrane;GO:0005793 endoplasmic reticulum-Golgi intermediate compartment", "go_biological_process": "GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "A5PMC4-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A8HAM3-1", "uniprot_id": [ { "id": "A8HAM3_DANRE", "url": "https://www.uniprot.org/uniprot/A8HAM3", "type": "external" } ], "mass": 55050.0, "length": 539, "protein_name": "Serum response factor", "gene_name": "srfa", "organism": "Zebrafish", "refseq_name": "serum response factor a", "refseq_ac": [ { "id": "NP_001103996", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001103996", "type": "external" } ], "gene_names_uniprotkb": "srfa; srf1; srf", "gene_names_refseq": "srf1; srfa; srf", "protein_names_uniprotkb": "Serum response factor", "protein_names_refseq": "DreSrf1; serum response factor a", "tax_id": 7955, "disease": "cardiomyopathy (Disease Ontology:DOID:0050700); dilated cardiomyopathy (Disease Ontology:DOID:12930); lymphangioleiomyomatosis (Disease Ontology:DOID:3319); congestive heart failure (Disease Ontology:DOID:6000)", "pathway": " (dre:30431); (R-DRE-5663220); (R-DRE-9031628)", "pathway_count": 3, "publication_count": 10, "publication_id_list": "10446383;17288542;18415940;22815879;23990987;27471727;28954428;31668369;34749643;38542412", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GFIL01039655.1, SRR32588727.1445645.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA4476730, SAMEA4476732 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000022.1. On Jun 25, 2025 this sequence version replaced NP_001103996.1. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications., [RefSeq]; A novel STARS-SRF feed-forward autoregulatory loop could play an essential role in STARS regulation and cardiac function, [RefSeq, PubMed]; SRF was duplicated in the zebrafish genome and its protein expression in all three muscle cell types is highly conserved across vertebrate animals suggesting an ancient code for transcriptional regulation of genes unique to muscle cell lineages., [RefSeq, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 4, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NFF2", "ec_number_list": [], "go_molecular_function": "GO:0010736 serum response element binding;GO:0046983 protein dimerization activity;GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0060379 cardiac muscle cell myoblast differentiation;GO:0006351 DNA-templated transcription;GO:0045944 positive regulation of transcription by RNA polymerase II;GO:0042060 wound healing;GO:0002042 cell migration involved in sprouting angiogenesis", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "A8HAM3-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3AQD1-1", "uniprot_id": [ { "id": "A0A8M3AQD1_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3AQD1", "type": "external" } ], "mass": 284834.0, "length": 2604, "protein_name": "Centrosomal protein of 192 kDa isoform X1", "gene_name": "cep192", "organism": "Zebrafish", "refseq_name": "centrosomal protein of 192 kDa isoform X1", "refseq_ac": [ { "id": "XP_009290386", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009290386", "type": "external" } ], "gene_names_uniprotkb": "cep192", "gene_names_refseq": "cep192", "protein_names_uniprotkb": "Centrosomal protein of 192 kDa isoform X1", "protein_names_refseq": "centrosomal protein of 192 kDa isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:565521)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133191) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_009290386.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005814 centriole;GO:0000242 pericentriolar material;GO:0120098 procentriole", "go_biological_process": "GO:0090222 centrosome-templated microtubule nucleation;GO:0051298 centrosome duplication;GO:0071539 protein localization to centrosome;GO:0090307 mitotic spindle assembly;GO:0007098 centrosome cycle", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3AQD1-1", "record_type": "protein", "filter_code": "0000000.0000001.010000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3AQ22-1", "uniprot_id": [ { "id": "A0A8M3AQ22_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3AQ22", "type": "external" } ], "mass": 56451.0, "length": 503, "protein_name": "G protein-activated inward rectifier potassium channel 1", "gene_name": "kcnj9", "organism": "Zebrafish", "refseq_name": "G protein-activated inward rectifier potassium channel 3", "refseq_ac": [ { "id": "XP_009297143", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009297143", "type": "external" } ], "gene_names_uniprotkb": "kcnj9", "gene_names_refseq": "kcnj9", "protein_names_uniprotkb": "G protein-activated inward rectifier potassium channel 1; G protein-activated inward rectifier potassium channel 3; Inward rectifier K(+) channel Kir3.1; Inward rectifier K(+) channel Kir3.3; Potassium channel, inwardly rectifying subfamily J member 3; Potassium channel, inwardly rectifying subfamily J member 9", "protein_names_refseq": "G protein-activated inward rectifier potassium channel 3", "tax_id": 7955, "disease": "", "pathway": " (dre:100334285)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133177) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [ { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "1.5.1.2", "url": "https://www.rhea-db.org/rhea/?query=ec:1.5.1.2", "type": "external" } ], "go_molecular_function": "GO:0015467 G-protein activated inward rectifier potassium channel activity", "go_cellular_component": "GO:0005886 plasma membrane;GO:0034702 monoatomic ion channel complex", "go_biological_process": "GO:0007399 nervous system development;GO:1990573 potassium ion import across plasma membrane", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3AQ22-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3AQ68-1", "uniprot_id": [ { "id": "A0A8M3AQ68_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3AQ68", "type": "external" } ], "mass": 265923.0, "length": 2350, "protein_name": "Nucleoprotein TPR", "gene_name": "tpra", "organism": "Zebrafish", "refseq_name": "nucleoprotein TPR isoform X1", "refseq_ac": [ { "id": "XP_009296772", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009296772", "type": "external" } ], "gene_names_uniprotkb": "tpra", "gene_names_refseq": "tpra", "protein_names_uniprotkb": "Nucleoprotein TPR; NPC-associated intranuclear protein", "protein_names_refseq": "nucleoprotein TPR isoform X1", "tax_id": 7955, "disease": "autosomal recessive intellectual developmental disorder (Disease Ontology:DOID:0060308); lung cancer (Disease Ontology:DOID:1324)", "pathway": " (dre:571089)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "40044042", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133177) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_009296772.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 1, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 1, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 1, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 1, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 0, "biomarker_type": "", "glycan_count": 1, "disease_count": 2, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0017056 structural constituent of nuclear pore", "go_cellular_component": "GO:0005643 nuclear pore;GO:0005819 spindle;GO:0031965 nuclear membrane;GO:0000776 kinetochore;GO:0034399 nuclear periphery", "go_biological_process": "GO:0006406 mRNA export from nucleus;GO:0051301 cell division;GO:1901673 regulation of mitotic spindle assembly;GO:0006606 protein import into nucleus;GO:0051028 mRNA transport", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "A0A8M3AQ68-1", "record_type": "protein", "filter_code": "0000000.0000111.010000.000000000000000001.0100000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3AT20-1", "uniprot_id": [ { "id": "A0A8M3AT20_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3AT20", "type": "external" } ], "mass": 19326.0, "length": 163, "protein_name": "AP complex subunit sigma", "gene_name": "ap1s3a", "organism": "Zebrafish", "refseq_name": "AP-1 complex subunit sigma-3a isoform X1", "refseq_ac": [ { "id": "XP_009290225", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009290225", "type": "external" } ], "gene_names_uniprotkb": "ap1s3a; zgc:112172", "gene_names_refseq": "ap1s3a; zgc:112172", "protein_names_uniprotkb": "AP complex subunit sigma", "protein_names_refseq": "AP-1 complex subunit sigma-3a isoform X1", "tax_id": 7955, "disease": "psoriasis 15 (Disease Ontology:DOID:0111281)", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133190) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0035615 clathrin adaptor activity", "go_cellular_component": "GO:0005905 clathrin-coated pit;GO:0030121 AP-1 adaptor complex", "go_biological_process": "GO:0006886 intracellular protein transport;GO:0016192 vesicle-mediated transport", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3AT20-1", "record_type": "protein", "filter_code": "0000000.0000010.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3AQ72-1", "uniprot_id": [ { "id": "A0A8M3AQ72_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3AQ72", "type": "external" } ], "mass": 28548.0, "length": 269, "protein_name": "Aquaporin-1a.2 isoform X2", "gene_name": "aqp1a.2", "organism": "Zebrafish", "refseq_name": "aquaporin-1a.2 isoform X2", "refseq_ac": [ { "id": "XP_009297361", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009297361", "type": "external" } ], "gene_names_uniprotkb": "aqp1a.2", "gene_names_refseq": "aqp1a.2", "protein_names_uniprotkb": "Aquaporin-1a.2 isoform X2", "protein_names_refseq": "aquaporin-1a.2 isoform X2", "tax_id": 7955, "disease": "autosomal recessive polycystic kidney disease (Disease Ontology:DOID:0110861); hypertension (Disease Ontology:DOID:10763); hydrocephalus (Disease Ontology:DOID:10908); uveitis (Disease Ontology:DOID:13141); retinal vein occlusion (Disease Ontology:DOID:1727); status epilepticus (Disease Ontology:DOID:1824); brain edema (Disease Ontology:DOID:4724); central pontine myelinolysis (Disease Ontology:DOID:636); diabetes mellitus (Disease Ontology:DOID:9351); intracranial hypertension (Disease Ontology:DOID:9428)", "pathway": " (dre:559284)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133177) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 10, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0015267 channel activity;GO:0005372 water transmembrane transporter activity", "go_cellular_component": "GO:0016020 membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3AQ72-1", "record_type": "protein", "filter_code": "0000000.0000011.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3AQI8-1", "uniprot_id": [ { "id": "A0A8M3AQI8_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3AQI8", "type": "external" } ], "mass": 58440.0, "length": 524, "protein_name": "non-specific serine/threonine protein kinase", "gene_name": "pimr108", "organism": "Zebrafish", "refseq_name": "serine/threonine-protein kinase pim-1-like isoform X1", "refseq_ac": [ { "id": "XP_009290538", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009290538", "type": "external" } ], "gene_names_uniprotkb": "pimr108", "gene_names_refseq": "pimr108", "protein_names_uniprotkb": "non-specific serine/threonine protein kinase; 2.7.11.1", "protein_names_refseq": "serine/threonine-protein kinase pim-1-like isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:100147946)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133191) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_009290538.2. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [ { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.7.11.13", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.13", "type": "external" }, { "id": "2.7.11.25", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.25", "type": "external" }, { "id": "2.7.10.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.1", "type": "external" }, { "id": "2.7.11.22", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.22", "type": "external" }, { "id": "2.7.11.21", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.21", "type": "external" }, { "id": "2.7.11.17", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.17", "type": "external" }, { "id": "2.7.12.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.1", "type": "external" }, { "id": "2.7.12.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.2", "type": "external" }, { "id": "2.7.11.24", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.24", "type": "external" }, { "id": "2.7.10.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.2", "type": "external" }, { "id": "2.7.11.23", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.23", "type": "external" }, { "id": "2.7.1.150", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.150", "type": "external" }, { "id": "2.7.11.12", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.12", "type": "external" }, { "id": "2.7.11.39", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.39", "type": "external" }, { "id": "2.7.11.11", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.11", "type": "external" }, { "id": "2.7.1.153", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.153", "type": "external" }, { "id": "2.7.1.137", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.137", "type": "external" }, { "id": "2.7.1.154", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.154", "type": "external" }, { "id": "2.7.11.26", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.26", "type": "external" }, { "id": "2.7.11.31", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.31", "type": "external" } ], "go_molecular_function": "GO:0004674 protein serine/threonine kinase activity;GO:0005524 ATP binding", "go_cellular_component": "GO:0005737 cytoplasm", "go_biological_process": "GO:0043066 negative regulation of apoptotic process;GO:0007346 regulation of mitotic cell cycle", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3AQI8-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3AQL0-1", "uniprot_id": [ { "id": "A0A8M3AQL0_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3AQL0", "type": "external" } ], "mass": 46529.0, "length": 409, "protein_name": "non-specific serine/threonine protein kinase", "gene_name": "sgk2b", "organism": "Zebrafish", "refseq_name": "serine/threonine-protein kinase Sgk2b isoform X1", "refseq_ac": [ { "id": "XP_009290615", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009290615", "type": "external" } ], "gene_names_uniprotkb": "sgk2b; zgc:154065", "gene_names_refseq": "sgk2b; zgc:154065", "protein_names_uniprotkb": "non-specific serine/threonine protein kinase; 2.7.11.1", "protein_names_refseq": "serine/threonine-protein kinase Sgk2b isoform X1", "tax_id": 7955, "disease": "", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133191) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0004674 protein serine/threonine kinase activity;GO:0005524 ATP binding;GO:0015459 potassium channel regulator activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm", "go_biological_process": "GO:0035556 intracellular signal transduction;GO:0048812 neuron projection morphogenesis", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3AQL0-1", "record_type": "protein", "filter_code": "0000000.0000000.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3ARE8-1", "uniprot_id": [ { "id": "A0A8M3ARE8_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3ARE8", "type": "external" } ], "mass": 22397.0, "length": 198, "protein_name": "Suppressor of cytokine signaling 2", "gene_name": "socs2", "organism": "Zebrafish", "refseq_name": "suppressor of cytokine signaling 2 isoform X1", "refseq_ac": [ { "id": "XP_005164804", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005164804", "type": "external" } ], "gene_names_uniprotkb": "socs2; si:dkey-202b22.1", "gene_names_refseq": "si:dkey-202b22.1; socs2", "protein_names_uniprotkb": "Suppressor of cytokine signaling 2", "protein_names_refseq": "suppressor of cytokine signaling 2 isoform X1", "tax_id": 7955, "disease": "ductal carcinoma in situ (Disease Ontology:DOID:0060074); endometrial cancer (Disease Ontology:DOID:1380); invasive ductal carcinoma (Disease Ontology:DOID:3008); ovarian carcinoma (Disease Ontology:DOID:4001)", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133179) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]; Substrate-recognition component of a cullin-5-RING E3 ubiquitin-protein ligase complex (ECS complex, also named CRL5 complex), which mediates the ubiquitination and subsequent proteasomal degradation of target proteins, such as EPOR and GHR. Specifically recognizes and binds phosphorylated proteins via its SH2 domain, promoting their ubiquitination. The ECS(SOCS2) complex acts as a key regulator of growth hormone receptor (GHR) levels by mediating ubiquitination and degradation of GHR, following GHR phosphorylation by JAK2. The ECS(SOCS2) also catalyzes ubiquitination and degradation of JAK2-phosphorylated EPOR., [UniProtKB, UniProtKB]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 4, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0005126 cytokine receptor binding", "go_cellular_component": "GO:0005737 cytoplasm", "go_biological_process": "GO:0035556 intracellular signal transduction;GO:0016567 protein ubiquitination;GO:0019221 cytokine-mediated signaling pathway;GO:0046426 negative regulation of receptor signaling pathway via JAK-STAT", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3ARE8-1", "record_type": "protein", "filter_code": "0000000.0000010.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3ARK1-1", "uniprot_id": [ { "id": "A0A8M3ARK1_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3ARK1", "type": "external" } ], "mass": 187336.0, "length": 1690, "protein_name": "Bifunctional glutamate/proline--tRNA ligase", "gene_name": "eprs1", "organism": "Zebrafish", "refseq_name": "bifunctional glutamate/proline--tRNA ligase isoform X1", "refseq_ac": [ { "id": "XP_009291485", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009291485", "type": "external" } ], "gene_names_uniprotkb": "eprs1; eprs; wu:fb06c03; wu:fb38d08; wu:ft34d10", "gene_names_refseq": "eprs1; eprs; wu:fb06c03; wu:fb38d08; wu:ft34d10", "protein_names_uniprotkb": "Bifunctional glutamate/proline--tRNA ligase; 6.1.1.15; 6.1.1.17; Bifunctional aminoacyl-tRNA synthetase", "protein_names_refseq": "bifunctional glutamate/proline--tRNA ligase isoform X1", "tax_id": 7955, "disease": "hypomyelinating leukodystrophy 15 (Disease Ontology:DOID:0070398)", "pathway": " (dre:562037)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "16109975;17560942;21652651;26454018;26469318;28252024;28934368;34172899;34872004;38965236", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133192) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [ { "id": "6.1.1.15", "url": "https://www.rhea-db.org/rhea/?query=ec:6.1.1.15", "type": "external" }, { "id": "6.1.1.17", "url": "https://www.rhea-db.org/rhea/?query=ec:6.1.1.17", "type": "external" }, { "id": "6.1.1.24", "url": "https://www.rhea-db.org/rhea/?query=ec:6.1.1.24", "type": "external" } ], "go_molecular_function": "GO:0004827 proline-tRNA ligase activity;GO:0003723 RNA binding;GO:0005524 ATP binding;GO:0046872 metal ion binding;GO:0004818 glutamate-tRNA ligase activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0017101 aminoacyl-tRNA synthetase multienzyme complex", "go_biological_process": "GO:0006433 prolyl-tRNA aminoacylation;GO:0006424 glutamyl-tRNA aminoacylation", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "A0A8M3ARK1-1", "record_type": "protein", "filter_code": "0000000.0000111.010000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3ARP5-1", "uniprot_id": [ { "id": "A0A8M3ARP5_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3ARP5", "type": "external" } ], "mass": 166967.0, "length": 1480, "protein_name": "Plexin-C1", "gene_name": "plxnc1", "organism": "Zebrafish", "refseq_name": "plexin-C1", "refseq_ac": [ { "id": "XP_021330924", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021330924", "type": "external" } ], "gene_names_uniprotkb": "plxnc1", "gene_names_refseq": "plxnc1", "protein_names_uniprotkb": "Plexin-C1", "protein_names_refseq": "plexin-C1", "tax_id": 7955, "disease": "", "pathway": " (dre:562273)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133179) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0017154 semaphorin receptor activity", "go_cellular_component": "GO:0002116 semaphorin receptor complex;GO:0005886 plasma membrane", "go_biological_process": "GO:0007162 negative regulation of cell adhesion;GO:0071526 semaphorin-plexin signaling pathway;GO:0007416 synapse assembly;GO:0030334 regulation of cell migration;GO:0008360 regulation of cell shape", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3ARP5-1", "record_type": "protein", "filter_code": "0000000.0000001.010000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3ARS6-1", "uniprot_id": [ { "id": "A0A8M3ARS6_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3ARS6", "type": "external" } ], "mass": 92471.0, "length": 813, "protein_name": "Deoxyribodipyrimidine photo-lyase", "gene_name": "si:ch1073-390k14.1", "organism": "Zebrafish", "refseq_name": "deoxyribodipyrimidine photo-lyase", "refseq_ac": [ { "id": "XP_021328896", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021328896", "type": "external" } ], "gene_names_uniprotkb": "si:ch1073-390k14.1", "gene_names_refseq": "si:ch1073-390k14.1", "protein_names_uniprotkb": "Deoxyribodipyrimidine photo-lyase", "protein_names_refseq": "deoxyribodipyrimidine photo-lyase", "tax_id": 7955, "disease": "", "pathway": " (dre:101883856)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133193) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "E7FFE4", "ec_number_list": [], "go_molecular_function": "GO:0003677 DNA binding;GO:0071949 FAD binding;GO:0003904 deoxyribodipyrimidine photo-lyase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm", "go_biological_process": "GO:0006950 response to stress;GO:0032922 circadian regulation of gene expression;GO:0006139 nucleobase-containing compound metabolic process;GO:0043153 entrainment of circadian clock by photoperiod", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3ARS6-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3ART2-1", "uniprot_id": [ { "id": "A0A8M3ART2_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3ART2", "type": "external" } ], "mass": 142103.0, "length": 1285, "protein_name": "IQ motif and SEC7 domain-containing protein 3", "gene_name": "iqsec3a", "organism": "Zebrafish", "refseq_name": "IQ motif and SEC7 domain-containing protein 3 isoform X1", "refseq_ac": [ { "id": "XP_009298725", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009298725", "type": "external" } ], "gene_names_uniprotkb": "iqsec3a", "gene_names_refseq": "iqsec3a", "protein_names_uniprotkb": "IQ motif and SEC7 domain-containing protein 3", "protein_names_refseq": "IQ motif and SEC7 domain-containing protein 3 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:797355)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133179) annotated using gene prediction method: Gnomon, supported by mRNA evidence. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_009298725.1. COMPLETENESS: full length., [RefSeq]; Acts as a guanine nucleotide exchange factor (GEF) for ARF1., [UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 2, "predicted_n_glycosites": 0, "predicted_o_glycosites": 2, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 2, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0005085 guanyl-nucleotide exchange factor activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0098839 postsynaptic density membrane;GO:0014069 postsynaptic density", "go_biological_process": "GO:0016192 vesicle-mediated transport;GO:0032012 regulation of ARF protein signal transduction;GO:0099149 regulation of postsynaptic neurotransmitter receptor internalization", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3ART2-1", "record_type": "protein", "filter_code": "0000000.0000001.010000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3ARX4-1", "uniprot_id": [ { "id": "A0A8M3ARX4_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3ARX4", "type": "external" } ], "mass": 22161.0, "length": 196, "protein_name": "Glial cell line-derived neurotrophic factor", "gene_name": "gdnfb", "organism": "Zebrafish", "refseq_name": "glial cell line-derived neurotrophic factor", "refseq_ac": [ { "id": "XP_009299466", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009299466", "type": "external" } ], "gene_names_uniprotkb": "gdnfb", "gene_names_refseq": "gdnfb", "protein_names_uniprotkb": "Glial cell line-derived neurotrophic factor", "protein_names_refseq": "glial cell line-derived neurotrophic factor", "tax_id": 7955, "disease": "alcohol dependence (Disease Ontology:DOID:0050741); nicotine dependence (Disease Ontology:DOID:0050742); Kennedy's disease (Disease Ontology:DOID:0060161); alcohol-associated liver disease (Disease Ontology:DOID:0070658); Parkinsonism (Disease Ontology:DOID:0080855); Hirschsprung's disease (Disease Ontology:DOID:10487); Alzheimer's disease (Disease Ontology:DOID:10652); obsessive-compulsive disorder (Disease Ontology:DOID:10933); sciatic neuropathy (Disease Ontology:DOID:11446); acoustic neuroma (Disease Ontology:DOID:12689); hyperprolactinemia (Disease Ontology:DOID:12700); Guillain-Barre syndrome (Disease Ontology:DOID:12842); Sjogren's syndrome (Disease Ontology:DOID:12894); Parkinson's disease (Disease Ontology:DOID:14330); alcohol use disorder (Disease Ontology:DOID:1574); depressive disorder (Disease Ontology:DOID:1596); pancreatic cancer (Disease Ontology:DOID:1793); epilepsy (Disease Ontology:DOID:1826); anxiety disorder (Disease Ontology:DOID:2030); glomerulonephritis (Disease Ontology:DOID:2921); Churg-Strauss syndrome (Disease Ontology:DOID:3049); amyotrophic lateral sclerosis (Disease Ontology:DOID:332); temporal lobe epilepsy (Disease Ontology:DOID:3328); middle cerebral artery infarction (Disease Ontology:DOID:3525); neuromuscular disease (Disease Ontology:DOID:440); amphetamine abuse (Disease Ontology:DOID:670); irritable bowel syndrome (Disease Ontology:DOID:9778); polyarteritis nodosa (Disease Ontology:DOID:9810); heroin dependence (Disease Ontology:DOID:9976)", "pathway": " (dre:101885082)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133180) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_009299466.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 29, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0030971 receptor tyrosine kinase binding;GO:0008083 growth factor activity;GO:0030116 glial cell-derived neurotrophic factor receptor binding", "go_cellular_component": "GO:0005615 extracellular space", "go_biological_process": "GO:0035860 glial cell-derived neurotrophic factor receptor signaling pathway;GO:0031175 neuron projection development", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3ARX4-1", "record_type": "protein", "filter_code": "0000000.0000011.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3ASB8-1", "uniprot_id": [ { "id": "A0A8M3ASB8_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3ASB8", "type": "external" } ], "mass": 55607.0, "length": 501, "protein_name": "Aldehyde dehydrogenase", "gene_name": "aldh3b4", "organism": "Zebrafish", "refseq_name": "aldehyde dehydrogenase family 3 member B1", "refseq_ac": [ { "id": "XP_009299655", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009299655", "type": "external" } ], "gene_names_uniprotkb": "aldh3b4", "gene_names_refseq": "aldh3b4", "protein_names_uniprotkb": "Aldehyde dehydrogenase", "protein_names_refseq": "aldehyde dehydrogenase family 3 member B1", "tax_id": 7955, "disease": "Sjogren-Larsson syndrome (Disease Ontology:DOID:14501)", "pathway": " (dre:557008)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133180) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0004029 aldehyde dehydrogenase (NAD+) activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0016020 membrane", "go_biological_process": "GO:0006081 aldehyde metabolic process", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3ASB8-1", "record_type": "protein", "filter_code": "0000000.0000011.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3ASE9-1", "uniprot_id": [ { "id": "A0A8M3ASE9_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3ASE9", "type": "external" } ], "mass": 61960.0, "length": 544, "protein_name": "Protein GPR107 isoform X1", "gene_name": "gpr107", "organism": "Zebrafish", "refseq_name": "protein GPR107 isoform X1", "refseq_ac": [ { "id": "XP_009299824", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009299824", "type": "external" } ], "gene_names_uniprotkb": "gpr107; fi85e04; wu:fi85e04; zgc:153685", "gene_names_refseq": "fi85e04; gpr107; wu:fi85e04; zgc:153685", "protein_names_uniprotkb": "Protein GPR107 isoform X1", "protein_names_refseq": "protein GPR107 isoform X1", "tax_id": 7955, "disease": "", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133180) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0032050 clathrin heavy chain binding", "go_cellular_component": "GO:0005794 Golgi apparatus;GO:0016020 membrane;GO:0030136 clathrin-coated vesicle", "go_biological_process": "GO:0072583 clathrin-dependent endocytosis", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3ASE9-1", "record_type": "protein", "filter_code": "0000000.0000000.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3ASI7-1", "uniprot_id": [ { "id": "A0A8M3ASI7_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3ASI7", "type": "external" } ], "mass": 58757.0, "length": 521, "protein_name": "Lysosomal Pro-X carboxypeptidase", "gene_name": "prcp", "organism": "Zebrafish", "refseq_name": "lysosomal Pro-X carboxypeptidase isoform X1", "refseq_ac": [ { "id": "XP_009289787", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009289787", "type": "external" } ], "gene_names_uniprotkb": "prcp; zgc:91816", "gene_names_refseq": "prcp; zgc:91816", "protein_names_uniprotkb": "Lysosomal Pro-X carboxypeptidase; 3.4.16.2; Proline carboxypeptidase; Prolylcarboxypeptidase", "protein_names_refseq": "lysosomal Pro-X carboxypeptidase isoform X1", "tax_id": 7955, "disease": "brain infarction (Disease Ontology:DOID:3454)", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133190) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]; Cleaves C-terminal amino acids linked to proline in peptides such as angiotensin II, III and des-Arg9-bradykinin. This cleavage occurs at acidic pH, but enzymatic activity is retained with some substrates at neutral pH., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0008239 dipeptidyl-peptidase activity;GO:0004185 serine-type carboxypeptidase activity;GO:0004180 carboxypeptidase activity", "go_cellular_component": "GO:0005764 lysosome", "go_biological_process": "GO:0006508 proteolysis;GO:0043535 regulation of blood vessel endothelial cell migration;GO:0003085 negative regulation of systemic arterial blood pressure;GO:0060055 angiogenesis involved in wound healing", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3ASI7-1", "record_type": "protein", "filter_code": "0000000.0000010.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3ASM7-1", "uniprot_id": [ { "id": "A0A8M3ASM7_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3ASM7", "type": "external" } ], "mass": 88134.0, "length": 762, "protein_name": "Dynamin-binding protein", "gene_name": "arhgef38", "organism": "Zebrafish", "refseq_name": "rho guanine nucleotide exchange factor 38", "refseq_ac": [ { "id": "XP_009289887", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009289887", "type": "external" } ], "gene_names_uniprotkb": "arhgef38", "gene_names_refseq": "arhgef38", "protein_names_uniprotkb": "Dynamin-binding protein; Scaffold protein Tuba", "protein_names_refseq": "rho guanine nucleotide exchange factor 38", "tax_id": 7955, "disease": "", "pathway": " (dre:100317614)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133176) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0005085 guanyl-nucleotide exchange factor activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005795 Golgi stack;GO:0070161 anchoring junction", "go_biological_process": "GO:0035556 intracellular signal transduction", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3ASM7-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3ASS0-1", "uniprot_id": [ { "id": "A0A8M3ASS0_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3ASS0", "type": "external" } ], "mass": 178039.0, "length": 1587, "protein_name": "snRNA-activating protein complex subunit 4 isoform X1", "gene_name": "snapc4", "organism": "Zebrafish", "refseq_name": "snRNA-activating protein complex subunit 4 isoform X1", "refseq_ac": [ { "id": "XP_009300052", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009300052", "type": "external" } ], "gene_names_uniprotkb": "snapc4; fi18h02; si:dkey-1o2.4; si:dkey-1o2.5; wu:fi18h02", "gene_names_refseq": "fi18h02; si:dkey-1o2.4; si:dkey-1o2.5; snapc4; wu:fi18h02", "protein_names_uniprotkb": "snRNA-activating protein complex subunit 4 isoform X1", "protein_names_refseq": "snRNA-activating protein complex subunit 4 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:561241)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133180) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_009300052.2. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 4, "predicted_n_glycosites": 0, "predicted_o_glycosites": 4, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 4, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0001006 RNA polymerase III type 3 promoter sequence-specific DNA binding", "go_cellular_component": "GO:0019185 snRNA-activating protein complex", "go_biological_process": "GO:0031016 pancreas development;GO:0035622 intrahepatic bile duct development;GO:0042795 snRNA transcription by RNA polymerase II;GO:0042796 snRNA transcription by RNA polymerase III", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3ASS0-1", "record_type": "protein", "filter_code": "0000000.0000001.010000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3ASS4-1", "uniprot_id": [ { "id": "A0A8M3ASS4_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3ASS4", "type": "external" } ], "mass": 158628.0, "length": 1422, "protein_name": "Rho guanine nucleotide exchange factor 12 isoform X1", "gene_name": "arhgef12b", "organism": "Zebrafish", "refseq_name": "rho guanine nucleotide exchange factor 12 isoform X1", "refseq_ac": [ { "id": "XP_009300160", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009300160", "type": "external" } ], "gene_names_uniprotkb": "arhgef12b", "gene_names_refseq": "arhgef12b", "protein_names_uniprotkb": "Rho guanine nucleotide exchange factor 12 isoform X1", "protein_names_refseq": "rho guanine nucleotide exchange factor 12 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:571031)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133180) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_009300160.1. 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This record is derived from a genomic sequence (NC_133180) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0046872 metal ion binding;GO:0004843 cysteine-type deubiquitinase activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0048471 perinuclear region of cytoplasm", "go_biological_process": "GO:0006508 proteolysis;GO:0016579 protein deubiquitination;GO:0048511 rhythmic process", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3AST8-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3ASU7-1", "uniprot_id": [ { "id": "A0A8M3ASU7_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3ASU7", "type": "external" } ], "mass": 182824.0, "length": 1633, "protein_name": "Pappalysin-1", "gene_name": "pappab", "organism": "Zebrafish", "refseq_name": "pregnancy-associated plasma protein A, pappalysin 1b isoform X1", "refseq_ac": [ { "id": "XP_009300210", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009300210", "type": "external" } ], "gene_names_uniprotkb": "pappab; si:ch211-196f15.1", "gene_names_refseq": "pappab; si:ch211-196f15.1", "protein_names_uniprotkb": "Pappalysin-1; 3.4.24.79; Insulin-like growth factor-dependent IGF-binding protein 4 protease; Pregnancy-associated plasma protein A", "protein_names_refseq": "pregnancy-associated plasma protein A, pappalysin 1b isoform X1", "tax_id": 7955, "disease": "hypertension (Disease Ontology:DOID:10763); arteriosclerosis (Disease Ontology:DOID:2349); coronary artery disease (Disease Ontology:DOID:3393); carotid artery disease (Disease Ontology:DOID:3407); myocardial infarction (Disease Ontology:DOID:5844); degenerative disc disease (Disease Ontology:DOID:90); type 2 diabetes mellitus (Disease Ontology:DOID:9352)", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133180) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 7, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0004222 metalloendopeptidase activity;GO:0046872 metal ion binding;GO:0008233 peptidase activity", "go_cellular_component": "GO:0005615 extracellular space", "go_biological_process": "GO:0006508 proteolysis;GO:0007166 cell surface receptor signaling pathway;GO:0043009 chordate embryonic development", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3ASU7-1", "record_type": "protein", "filter_code": "0000000.0000010.010000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3ASV6-1", "uniprot_id": [ { "id": "A0A8M3ASV6_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3ASV6", "type": "external" } ], "mass": 68447.0, "length": 635, "protein_name": "Sushi domain-containing protein 5", "gene_name": "susd5", "organism": "Zebrafish", "refseq_name": "sushi domain-containing protein 5", "refseq_ac": [ { "id": "XP_005159810", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005159810", "type": "external" } ], "gene_names_uniprotkb": "susd5", "gene_names_refseq": "susd5", "protein_names_uniprotkb": "Sushi domain-containing protein 5", "protein_names_refseq": "sushi domain-containing protein 5", "tax_id": 7955, "disease": "", "pathway": " (dre:101886789)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133194) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "E7EYM4", "ec_number_list": [], "go_molecular_function": "GO:0005540 hyaluronic acid binding", "go_cellular_component": "", "go_biological_process": "GO:0007155 cell adhesion;GO:0007219 Notch signaling pathway", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3ASV6-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3ASW3-1", "uniprot_id": [ { "id": "A0A8M3ASW3_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3ASW3", "type": "external" } ], "mass": 243624.0, "length": 2201, "protein_name": "Alpha-tectorin", "gene_name": "tecta", "organism": "Zebrafish", "refseq_name": "alpha-tectorin", "refseq_ac": [ { "id": "XP_009300199", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009300199", "type": "external" } ], "gene_names_uniprotkb": "tecta", "gene_names_refseq": "tecta", "protein_names_uniprotkb": "Alpha-tectorin", "protein_names_refseq": "alpha-tectorin", "tax_id": 7955, "disease": "autosomal recessive nonsyndromic deafness 21 (Disease Ontology:DOID:0110479); autosomal dominant nonsyndromic deafness 12 (Disease Ontology:DOID:0110544); sensorineural hearing loss (Disease Ontology:DOID:10003)", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133180) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 3, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0AC58JME0;F1QK57", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005576 extracellular region;GO:0005886 plasma membrane;GO:0098552 side of membrane", "go_biological_process": "GO:0007160 cell-matrix adhesion;GO:0048840 otolith development;GO:0035889 otolith tethering", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3ASW3-1", "record_type": "protein", "filter_code": "0000000.0000010.010000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3ASY4-1", "uniprot_id": [ { "id": "A0A8M3ASY4_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3ASY4", "type": "external" } ], "mass": 53313.0, "length": 481, "protein_name": "Wiskott-Aldrich syndrome protein family member", "gene_name": "wasf3a", "organism": "Zebrafish", "refseq_name": "actin-binding protein WASF3", "refseq_ac": [ { "id": "XP_009300273", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009300273", "type": "external" } ], "gene_names_uniprotkb": "wasf3a", "gene_names_refseq": "wasf3a", "protein_names_uniprotkb": "Wiskott-Aldrich syndrome protein family member; WASP family protein member", "protein_names_refseq": "actin-binding protein WASF3", "tax_id": 7955, "disease": "", "pathway": " (dre:562750)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133180) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]; Downstream effector molecule involved in the transmission of signals from tyrosine kinase receptors and small GTPases to the actin cytoskeleton. Promotes formation of actin filaments. Part of the WAVE complex that regulates lamellipodia formation. The WAVE complex regulates actin filament reorganization via its interaction with the Arp2/3 complex., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0003779 actin binding;GO:0034237 protein kinase A regulatory subunit binding;GO:0071933 Arp2/3 complex binding", "go_cellular_component": "GO:0005856 cytoskeleton;GO:0030027 lamellipodium;GO:0031209 SCAR complex", "go_biological_process": "GO:0030036 actin cytoskeleton organization;GO:2000601 positive regulation of Arp2/3 complex-mediated actin nucleation", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3ASY4-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3AT32-1", "uniprot_id": [ { "id": "A0A8M3AT32_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3AT32", "type": "external" } ], "mass": 73812.0, "length": 655, "protein_name": "Mitochondrial disaggregase", "gene_name": "clpb", "organism": "Zebrafish", "refseq_name": "mitochondrial disaggregase isoform X1", "refseq_ac": [ { "id": "XP_009290275", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009290275", "type": "external" } ], "gene_names_uniprotkb": "clpb", "gene_names_refseq": "clpb", "protein_names_uniprotkb": "Mitochondrial disaggregase; Suppressor of potassium transport defect 3", "protein_names_refseq": "mitochondrial disaggregase isoform X1", "tax_id": 7955, "disease": "severe congenital neutropenia (Disease Ontology:DOID:0050590); 3-methylglutaconic aciduria type 7a (Disease Ontology:DOID:0081133); 3-methylglutaconic aciduria type 7b (Disease Ontology:DOID:0081134)", "pathway": " (dre:100331587)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133190) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_009290275.2. COMPLETENESS: full length., [RefSeq]; Functions as a regulatory ATPase and participates in secretion/protein trafficking process. Has ATP-dependent protein disaggregase activity and is required to maintain the solubility of key mitochondrial proteins. Involved in mitochondrial-mediated antiviral innate immunity, activates RIG-I-mediated signal transduction and production of IFNB1 and pro-inflammatory cytokine IL6. Plays a role in granulocyte differentiation., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 3, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [ { "id": "2.3.2.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.2.-", "type": "external" }, { "id": "2.3.2.27", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.2.27", "type": "external" }, { "id": "3.6.4.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.4.-", "type": "external" }, { "id": "4.2.99.18", "url": "https://www.rhea-db.org/rhea/?query=ec:4.2.99.18", "type": "external" }, { "id": "5.6.2.4", "url": "https://www.rhea-db.org/rhea/?query=ec:5.6.2.4", "type": "external" }, { "id": "5.6.2.3", "url": "https://www.rhea-db.org/rhea/?query=ec:5.6.2.3", "type": "external" }, { "id": "3.6.4.12", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.4.12", "type": "external" }, { "id": "3.6.4.13", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.4.13", "type": "external" }, { "id": "2.7.4.3", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.4.3", "type": "external" }, { "id": "7.6.2.2", "url": "https://www.rhea-db.org/rhea/?query=ec:7.6.2.2", "type": "external" }, { "id": "5.6.1.6", "url": "https://www.rhea-db.org/rhea/?query=ec:5.6.1.6", "type": "external" }, { "id": "7.6.2.3", "url": "https://www.rhea-db.org/rhea/?query=ec:7.6.2.3", "type": "external" }, { "id": "3.6.1.5", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.1.5", "type": "external" }, { "id": "3.6.4.6", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.4.6", "type": "external" }, { "id": "3.6.1.15", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.1.15", "type": "external" }, { "id": "3.6.4.10", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.4.10", "type": "external" }, { "id": "5.6.2.-", "url": "https://www.rhea-db.org/rhea/?query=ec:5.6.2.-", "type": "external" }, { "id": "2.7.7.7", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.7.7", "type": "external" }, { "id": "2.7.7.49", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.7.49", "type": "external" }, { "id": "5.6.2.5", "url": "https://www.rhea-db.org/rhea/?query=ec:5.6.2.5", "type": "external" }, { "id": "3.6.5.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.5.-", "type": "external" }, { "id": "3.6.1.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.1.-", "type": "external" } ], "go_molecular_function": "GO:0005524 ATP binding;GO:0016887 ATP hydrolysis activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005739 mitochondrion;GO:0005758 mitochondrial intermembrane space", "go_biological_process": "GO:0034605 cellular response to heat;GO:0021549 cerebellum development;GO:0060322 head development;GO:0009653 anatomical structure morphogenesis;GO:0001966 thigmotaxis", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3AT32-1", "record_type": "protein", "filter_code": "0000000.0000011.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "B8A4S7-1", "uniprot_id": [ { "id": "B8A4S7_DANRE", "url": "https://www.uniprot.org/uniprot/B8A4S7", "type": "external" } ], "mass": 111991.0, "length": 992, "protein_name": "E3 ISG15--protein ligase HERC5.4", "gene_name": "herc56.4", "organism": "Zebrafish", "refseq_name": "E3 ISG15--protein ligase HERC5.4", "refseq_ac": [ { "id": "NP_001139103", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001139103", "type": "external" } ], "gene_names_uniprotkb": "herc56.4; her56.4; herc5.4; si:ch211-281g13.5", "gene_names_refseq": "her56.4; herc5.4; herc56.4; si:ch211-281g13.5", "protein_names_uniprotkb": "E3 ISG15--protein ligase HERC5.4", "protein_names_refseq": "E3 ISG15--protein ligase HERC5.4; HECT and RLD domain containing E3 ubiquitin protein ligase 5.4", "tax_id": 7955, "disease": "", "pathway": " (dre:100148091)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "24683187;26469318;31732531;36902023", "class_list": "", "function": "##Evidence-Data-START## RNAseq introns :: partial sample support SAMN01765705, SAMN08196787 [ECO:0000350] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000001.1. On Jun 7, 2025 this sequence version replaced NP_001139103.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NRN5", "ec_number_list": [], "go_molecular_function": "GO:0004842 ubiquitin-protein transferase activity;GO:0016874 ligase activity", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "B8A4S7-1", "record_type": "protein", "filter_code": "0000000.0000101.010000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "B0UYT5-1", "uniprot_id": [ { "id": "MFD6B_DANRE", "url": "https://www.uniprot.org/uniprot/B0UYT5", "type": "external" } ], "mass": 82602.0, "length": 747, "protein_name": "Major facilitator superfamily domain-containing protein 6-B", "gene_name": "mfsd6b", "organism": "Zebrafish", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "mfsd6b; si:dkey-42h23.5; zgc:92925", "gene_names_refseq": "", "protein_names_uniprotkb": "Major facilitator superfamily domain-containing protein 6-B; Macrophage MHC class I receptor 2 homolog B", "protein_names_refseq": "", "tax_id": 7955, "disease": "", "pathway": " (dre:447825)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "22412924;23594743;26469318;27189481;28878041", "class_list": "", "function": "", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005886 plasma membrane;GO:0016020 membrane", "go_biological_process": "GO:0042590 antigen processing and presentation of exogenous peptide antigen via MHC class I", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "B0UYT5-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "B8A4B1-1", "uniprot_id": [ { "id": "B8A4B1_DANRE", "url": "https://www.uniprot.org/uniprot/B8A4B1", "type": "external" } ], "mass": 86238.0, "length": 784, "protein_name": "Shieldin complex subunit 2", "gene_name": "shld2", "organism": "Zebrafish", "refseq_name": "shieldin complex subunit 2", "refseq_ac": [ { "id": "NP_001139105", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001139105", "type": "external" } ], "gene_names_uniprotkb": "shld2; fam35a; si:ch211-134m17.9", "gene_names_refseq": "fam35a; shld2; si:ch211-134m17.9", "protein_names_uniprotkb": "Shieldin complex subunit 2", "protein_names_refseq": "family with sequence similarity 35, member A; shieldin complex subunit 2", "tax_id": 7955, "disease": "", "pathway": " (dre:100149820)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "26469318;27189481", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: SRR26395017.303720.1, SRR26395039.1723325.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505388, SAMEA4476747 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000013.1. On Mar 5, 2009 this sequence version replaced XP_001921671.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NTG0", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005634 nucleus;GO:0035861 site of double-strand break", "go_biological_process": "GO:0010569 regulation of double-strand break repair via homologous recombination", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "B8A4B1-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "B0UXU6-1", "uniprot_id": [ { "id": "M4GDA_DANRE", "url": "https://www.uniprot.org/uniprot/B0UXU6", "type": "external" } ], "mass": 24857.0, "length": 216, "protein_name": "MIF4G domain-containing protein A", "gene_name": "mif4gda", "organism": "Zebrafish", "refseq_name": "MIF4G domain-containing protein A", "refseq_ac": [ { "id": "NP_956678", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_956678", "type": "external" } ], "gene_names_uniprotkb": "mif4gda; si:ch211-260p11.2; zgc:64152", "gene_names_refseq": "mif4gda; zgc:64152", "protein_names_uniprotkb": "MIF4G domain-containing protein A", "protein_names_refseq": "MIF4G domain-containing protein A", "tax_id": 7955, "disease": "", "pathway": " (dre:393355)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "23594743", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC053283.1, CA474813.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC053283.1. On Jul 6, 2005 this sequence version replaced XP_698345.1., [RefSeq]; Functions in replication-dependent translation of histone mRNAs which differ from other eukaryotic mRNAs in that they do not end with a poly-A tail but a stem-loop. May participate in circularizing those mRNAs specifically enhancing their translation., [UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q7T324", "ec_number_list": [], "go_molecular_function": "GO:0003723 RNA binding;GO:0008494 translation activator activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005829 cytosol;GO:0005737 cytoplasm", "go_biological_process": "GO:0006446 regulation of translational initiation;GO:0006417 regulation of translation", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "B0UXU6-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A8HAL3-1", "uniprot_id": [ { "id": "A8HAL3_DANRE", "url": "https://www.uniprot.org/uniprot/A8HAL3", "type": "external" } ], "mass": 88252.0, "length": 769, "protein_name": "Pleckstrin homology domain-containing family G member 7", "gene_name": "plekhg7", "organism": "Zebrafish", "refseq_name": "pleckstrin homology domain-containing family G member 7", "refseq_ac": [ { "id": "NP_001315140", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001315140", "type": "external" } ], "gene_names_uniprotkb": "plekhg7; si:ch211-276p10.1; si:dkey-196d8.2; zgc:161981", "gene_names_refseq": "plekhg7; si:ch211-276p10.1; si:dkey-196d8.2; zgc:161981", "protein_names_uniprotkb": "Pleckstrin homology domain-containing family G member 7", "protein_names_refseq": "pleckstrin homology domain-containing family G member 7", "tax_id": 7955, "disease": "", "pathway": " (dre:562798)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "26469318", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GDQQ01000624.1, GFIL01030631.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000018.1. On Jun 9, 2016 this sequence version replaced XP_005170008.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1P9P4", "ec_number_list": [], "go_molecular_function": "GO:0005085 guanyl-nucleotide exchange factor activity", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "A8HAL3-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A7E2I7-1", "uniprot_id": [ { "id": "T151B_DANRE", "url": "https://www.uniprot.org/uniprot/A7E2I7", "type": "external" } ], "mass": 58805.0, "length": 513, "protein_name": "Transmembrane protein 151B", "gene_name": "tmem151ba", "organism": "Zebrafish", "refseq_name": "transmembrane protein 151B", "refseq_ac": [ { "id": "NP_001096614", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001096614", "type": "external" } ], "gene_names_uniprotkb": "tmem151ba; tmem151b; zgc:171639", "gene_names_refseq": "tmem151ba; tmem151b; zgc:171639", "protein_names_uniprotkb": "Transmembrane protein 151B", "protein_names_refseq": "transmembrane protein 151B", "tax_id": 7955, "disease": "", "pathway": " (dre:100006371)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC150366.1, CO921600.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505380, SAMEA4476729 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC150366.1. On Sep 5, 2007 this sequence version replaced XP_001345140.1., [RefSeq]", "predicted_glycosites": 3, "predicted_n_glycosites": 3, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 3, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0016020 membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A7E2I7-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000010000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A5PF44-1", "uniprot_id": [ { "id": "GARL3_DANRE", "url": "https://www.uniprot.org/uniprot/A5PF44", "type": "external" } ], "mass": 114144.0, "length": 1015, "protein_name": "GTPase-activating Rap/Ran-GAP domain-like protein 3", "gene_name": "garnl3", "organism": "Zebrafish", "refseq_name": "GTPase-activating Rap/Ran-GAP domain-like protein 3", "refseq_ac": [ { "id": "NP_001121999", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001121999", "type": "external" } ], "gene_names_uniprotkb": "garnl3; si:ch211-182d3.1; si:dkey-46k8.1", "gene_names_refseq": "garnl3; si:ch211-182d3.1; si:dkey-46k8.1", "protein_names_uniprotkb": "GTPase-activating Rap/Ran-GAP domain-like protein 3", "protein_names_refseq": "GTPase-activating Rap/Ran-GAP domain-like protein 3", "tax_id": 7955, "disease": "", "pathway": " (dre:560594)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "23594743", "class_list": "", "function": "##Evidence-Data-START## RNAseq introns :: partial sample support SAMEA3505370, SAMEA3505371 [ECO:0000350] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BX005029.13. On Jul 31, 2008 this sequence version replaced XP_689084.3., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0005096 GTPase activator activity", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "GO:0051056 regulation of small GTPase mediated signal transduction", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "A5PF44-1", "record_type": "protein", "filter_code": "0000000.0000101.010000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A8WHP3-1", "uniprot_id": [ { "id": "SC5A9_DANRE", "url": "https://www.uniprot.org/uniprot/A8WHP3", "type": "external" } ], "mass": 72225.0, "length": 657, "protein_name": "Sodium/glucose cotransporter 4", "gene_name": "slc5a9", "organism": "Zebrafish", "refseq_name": "sodium/glucose cotransporter 4", "refseq_ac": [ { "id": "NP_001107077", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001107077", "type": "external" } ], "gene_names_uniprotkb": "slc5a9; si:dkey-7o6.5", "gene_names_refseq": "slc5a9", "protein_names_uniprotkb": "Sodium/glucose cotransporter 4; Na(+)/glucose cotransporter 4; Solute carrier family 5 member 9", "protein_names_refseq": "Na(+)/glucose cotransporter 4; sodium/glucose cotransporter 4; solute carrier family 5 (sodium/glucose cotransporter), member 9; solute carrier family 5 (sodium/sugar cotransporter), member 9", "tax_id": 7955, "disease": "", "pathway": " (dre:564815); (R-DRE-189200)", "pathway_count": 2, "publication_count": 1, "publication_id_list": "23594743", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC115268.1, GFIL01038812.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505373 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000008.1. On Jan 20, 2008 this sequence version replaced XP_693237.2., [RefSeq]; Probable sodium-dependent sugar transporter., [UniProtKB]", "predicted_glycosites": 1, "predicted_n_glycosites": 1, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A7YT65", "ec_number_list": [], "go_molecular_function": "GO:0005402 carbohydrate:monoatomic cation symporter activity;GO:0015149 hexose transmembrane transporter activity;GO:0015370 solute:sodium symporter activity;GO:0022857 transmembrane transporter activity", "go_cellular_component": "GO:0005886 plasma membrane;GO:0016020 membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "A8WHP3-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000010000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A8E7S8-1", "uniprot_id": [ { "id": "A8E7S8_DANRE", "url": "https://www.uniprot.org/uniprot/A8E7S8", "type": "external" } ], "mass": 37287.0, "length": 323, "protein_name": "Mortality factor 4-like protein 1", "gene_name": "morf4l1", "organism": "Zebrafish", "refseq_name": "mortality factor 4-like protein 1", "refseq_ac": [ { "id": "NP_001002604", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001002604", "type": "external" } ], "gene_names_uniprotkb": "morf4l1; zgc:92289", "gene_names_refseq": "morf4l1; zgc:92289", "protein_names_uniprotkb": "Mortality factor 4-like protein 1", "protein_names_refseq": "mortality factor 4-like protein 1", "tax_id": 7955, "disease": "", "pathway": " (dre:436877)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "17643392;24240475;32640983;34315984", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GFIL01026644.1, GDQQ01004967.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000018.1, EH554398.1 and EH575511.1. On Jul 20, 2010 this sequence version replaced NP_001002604.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1N0P5", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005634 nucleus;GO:0035267 NuA4 histone acetyltransferase complex", "go_biological_process": "GO:0006281 DNA repair;GO:0006351 DNA-templated transcription;GO:0006355 regulation of DNA-templated transcription;GO:0006325 chromatin organization;GO:0006310 DNA recombination", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "A8E7S8-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A5WWJ4-1", "uniprot_id": [ { "id": "A5WWJ4_DANRE", "url": "https://www.uniprot.org/uniprot/A5WWJ4", "type": "external" } ], "mass": 53316.0, "length": 489, "protein_name": "Matrilin-1", "gene_name": "matn1", "organism": "Zebrafish", "refseq_name": "cartilage matrix protein precursor", "refseq_ac": [ { "id": "NP_001093210", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001093210", "type": "external" } ], "gene_names_uniprotkb": "matn1", "gene_names_refseq": "matn1", "protein_names_uniprotkb": "Matrilin-1; Cartilage matrix protein", "protein_names_refseq": "cartilage matrix protein precursor", "tax_id": 7955, "disease": "", "pathway": " (dre:403023)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "15588228;20089164;20463905;22116938;24293366;33105605;33618456;35885890;36265687;39171526", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GDQH01010712.1, BC045465.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000019.1. On Jul 26, 2007 this sequence version replaced XP_687257.2. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications., [RefSeq]; A major component of the extracellular matrix of non-articular cartilage. Binds to type 2 collagens and forms long concatenated protein networks as part of the extracellular matrix. Required for the network-like organization and bundling of collagen fibrils surrounding chondrocytes in the zones of maturation and hypertrophy. Required for mechanotransduction and adaption to mechanical loading in cartilage chondrocytes, resulting in an increase in expression of the extracellular matrix components ACAN and COL2A1. Acts as a moderator of angiogenesis in response to injury., [UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NDX4", "ec_number_list": [], "go_molecular_function": "GO:0005509 calcium ion binding", "go_cellular_component": "GO:0005576 extracellular region;GO:0031012 extracellular matrix", "go_biological_process": "GO:0051216 cartilage development", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "A5WWJ4-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A4QP31-1", "uniprot_id": [ { "id": "TBCC1_DANRE", "url": "https://www.uniprot.org/uniprot/A4QP31", "type": "external" } ], "mass": 65778.0, "length": 582, "protein_name": "TBCC domain-containing protein 1", "gene_name": "tbccd1", "organism": "Zebrafish", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "tbccd1; si:ch211-194d6.5; si:rp71-45g20.12; zgc:162789", "gene_names_refseq": "", "protein_names_uniprotkb": "TBCC domain-containing protein 1", "protein_names_refseq": "", "tax_id": 7955, "disease": "", "pathway": " (dre:100037389)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "21873635;23594743", "class_list": "", "function": "May play a role in the regulation of centrosome and Golgi apparatus positioning., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A8WHY2;Q5SQE5", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0031616 spindle pole centrosome;GO:0000922 spindle pole;GO:0005813 centrosome", "go_biological_process": "GO:0051684 maintenance of Golgi location;GO:0051661 maintenance of centrosome location", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "A4QP31-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A4QP78-1", "uniprot_id": [ { "id": "CNO11_DANRE", "url": "https://www.uniprot.org/uniprot/A4QP78", "type": "external" } ], "mass": 49707.0, "length": 445, "protein_name": "CCR4-NOT transcription complex subunit 11", "gene_name": "cnot11", "organism": "Zebrafish", "refseq_name": "CCR4-NOT transcription complex subunit 11", "refseq_ac": [ { "id": "NP_001082810", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001082810", "type": "external" } ], "gene_names_uniprotkb": "cnot11; fj49e01; wu:fj49e01; zgc:163002", "gene_names_refseq": "cnot11; fj49e01; wu:fj49e01; zgc:163002", "protein_names_uniprotkb": "CCR4-NOT transcription complex subunit 11", "protein_names_refseq": "CCR4-NOT transcription complex subunit 11; UPF0760 protein C2orf29 homolog", "tax_id": 7955, "disease": "", "pathway": " (dre:336124); (R-DRE-6804115)", "pathway_count": 2, "publication_count": 1, "publication_id_list": "40044042", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC139685.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC139685.1., [RefSeq]; Component of the CCR4-NOT complex which is one of the major cellular mRNA deadenylases and is linked to various cellular processes including bulk mRNA degradation, miRNA-mediated repression, translational repression during translational initiation and general transcription regulation. Additional complex functions may be a consequence of its influence on mRNA expression. Is required for the association of cnot10 with the CCR4-NOT complex. Does not seem to be required for complex deadenylase function (By similarity)., [UniProtKB]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 1, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 1, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 1, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 1, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 0, "biomarker_type": "", "glycan_count": 1, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0030014 CCR4-NOT complex", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006417 regulation of translation;GO:0031047 regulatory ncRNA-mediated gene silencing", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "A4QP78-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0100000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A4VCH4-1", "uniprot_id": [ { "id": "VP35L_DANRE", "url": "https://www.uniprot.org/uniprot/A4VCH4", "type": "external" } ], "mass": 108645.0, "length": 963, "protein_name": "VPS35 endosomal protein-sorting factor-like", "gene_name": "vps35l", "organism": "Zebrafish", "refseq_name": "VPS35 endosomal protein-sorting factor-like", "refseq_ac": [ { "id": "NP_001091651", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001091651", "type": "external" } ], "gene_names_uniprotkb": "vps35l; zgc:163107", "gene_names_refseq": "vps35l; zgc:163107", "protein_names_uniprotkb": "VPS35 endosomal protein-sorting factor-like", "protein_names_refseq": "UPF0505 protein C16orf62 homolog; VPS35 endosomal protein-sorting factor-like", "tax_id": 7955, "disease": "Ritscher-Schinzel syndrome (Disease Ontology:DOID:0060565)", "pathway": " (dre:563454); (R-DRE-6798695)", "pathway_count": 2, "publication_count": 1, "publication_id_list": "40044042", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC139716.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505371, SAMEA3505373 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC139716.1. On May 23, 2007 this sequence version replaced XP_691906.2., [RefSeq]; Acts as a component of the retriever complex. The retriever complex is a heterotrimeric complex related to retromer cargo-selective complex (CSC) and essential for retromer-independent retrieval and recycling of numerous cargos such as integrins. The recruitment of the retriever complex to the endosomal membrane involves CCC and WASH complexes. In the endosomes, drives the retrieval and recycling of NxxY-motif-containing cargo proteins by coupling to SNX17, a cargo essential for the homeostatic maintenance of numerous cell surface proteins associated with processes that include cell migration, cell adhesion, nutrient supply and cell signaling. May be involved in copper-dependent atp7a trafficking between the trans-Golgi network and vesicles in the cell periphery., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 1, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 1, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 1, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 1, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 0, "biomarker_type": "", "glycan_count": 1, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005768 endosome", "go_biological_process": "GO:0015031 protein transport;GO:0032456 endocytic recycling", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "A4VCH4-1", "record_type": "protein", "filter_code": "0000000.0000111.010000.000000000000000001.0100000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A5D6V4-1", "uniprot_id": [ { "id": "TM17B_DANRE", "url": "https://www.uniprot.org/uniprot/A5D6V4", "type": "external" } ], "mass": 22550.0, "length": 191, "protein_name": "Transmembrane protein 17B", "gene_name": "Tmem17b", "organism": "Zebrafish", "refseq_name": "transmembrane protein 17B", "refseq_ac": [ { "id": "NP_001091861", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001091861", "type": "external" } ], "gene_names_uniprotkb": "Tmem17b; zgc:163141", "gene_names_refseq": "Tmem17b; tmem17; zgc:163141", "protein_names_uniprotkb": "Transmembrane protein 17B", "protein_names_refseq": "transmembrane protein 17B", "tax_id": 7955, "disease": "", "pathway": " (dre:568092)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "23594743", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: SRR32588718.29383211.1, EH543983.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505372 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000025.1. On or before Aug 31, 2013 this sequence version replaced XP_005163178.1, XP_696492.1., [RefSeq]; Transmembrane component of the tectonic-like complex, a complex localized at the transition zone of primary cilia and acting as a barrier that prevents diffusion of transmembrane proteins between the cilia and plasma membranes. Required for ciliogenesis and sonic hedgehog/SHH signaling (By similarity)., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0036038 MKS complex;GO:0060170 ciliary membrane;GO:0035869 ciliary transition zone", "go_biological_process": "GO:0060271 cilium assembly;GO:0007224 smoothened signaling pathway;GO:1905515 non-motile cilium assembly", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "A5D6V4-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A5D8S1-1", "uniprot_id": [ { "id": "LUZP2_DANRE", "url": "https://www.uniprot.org/uniprot/A5D8S1", "type": "external" } ], "mass": 39131.0, "length": 346, "protein_name": "Leucine zipper protein 2", "gene_name": "luzp2", "organism": "Zebrafish", "refseq_name": "leucine zipper protein 2 isoform 2 precursor", "refseq_ac": [ { "id": "NP_001092725", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001092725", "type": "external" } ], "gene_names_uniprotkb": "luzp2; si:ch211-243k12.1; si:dkey-239j7.1; si:dkeyp-86e4.1", "gene_names_refseq": "luzp2; si:ch211-243k12.1; si:dkey-239j7.1; si:dkeyp-86e4.1", "protein_names_uniprotkb": "Leucine zipper protein 2", "protein_names_refseq": "leucine zipper protein 2 isoform 2 precursor", "tax_id": 7955, "disease": "", "pathway": " (dre:100137118)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC141788.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505371, SAMEA3505376 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC141788.1. Transcript Variant: This variant (2) lacks an exon in the 3' coding region compared to variant 1. The resulting protein (isoform 2) is shorter compared to isoform 1., [RefSeq]", "predicted_glycosites": 4, "predicted_n_glycosites": 4, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 4, "binding_glycan_count": 0, "secondary_ac_list": "A8WFS7", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005576 extracellular region", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A5D8S1-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000010000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A5H1X0-1", "uniprot_id": [ { "id": "A5H1X0_DANRE", "url": "https://www.uniprot.org/uniprot/A5H1X0", "type": "external" } ], "mass": 32866.0, "length": 303, "protein_name": "Vomeronasal type-1 receptor", "gene_name": "ora2", "organism": "Zebrafish", "refseq_name": "olfactory receptor class A related 2", "refseq_ac": [ { "id": "NP_001091865", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001091865", "type": "external" } ], "gene_names_uniprotkb": "ora2; v1r1", "gene_names_refseq": "ora2; v1r1", "protein_names_uniprotkb": "Vomeronasal type-1 receptor", "protein_names_refseq": "V1R pheromone receptor-like protein; olfactory receptor class A (V1r-like homolog); olfactory receptor class A related 2; vn1r1l", "tax_id": 7955, "disease": "", "pathway": " (dre:100005331)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "17440615;17717047;21452212;22038944;24831010;26555542;32636305;36045218", "class_list": "", "function": "PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from DQ887614.1. On May 30, 2007 this sequence version replaced XP_001344418.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0005550 pheromone binding;GO:0016503 pheromone receptor activity", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "GO:0019236 response to pheromone", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "A5H1X0-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A5PEY8-1", "uniprot_id": [ { "id": "A5PEY8_DANRE", "url": "https://www.uniprot.org/uniprot/A5PEY8", "type": "external" } ], "mass": 68008.0, "length": 607, "protein_name": "non-specific serine/threonine protein kinase", "gene_name": "pak6b", "organism": "Zebrafish", "refseq_name": "serine/threonine-protein kinase PAK 6b", "refseq_ac": [ { "id": "NP_001155959", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001155959", "type": "external" } ], "gene_names_uniprotkb": "pak6b; pak6; si:ch211-158b22.3", "gene_names_refseq": "pak6b; pak6; si:ch211-158b22.3", "protein_names_uniprotkb": "non-specific serine/threonine protein kinase; 2.7.11.1", "protein_names_refseq": "p21 protein (Cdc42/Rac)-activated kinase 6; p21-activated kinase 6; serine/threonine-protein kinase PAK 6b", "tax_id": 7955, "disease": "Parkinson's disease (Disease Ontology:DOID:14330); clear cell renal cell carcinoma (Disease Ontology:DOID:4467)", "pathway": " (dre:567874); (R-DRE-9013148); (R-DRE-9013149); (R-DRE-9013407); (R-DRE-9013424)", "pathway_count": 5, "publication_count": 6, "publication_id_list": "23032194;23118857;26469318;28252024;30929901;37290634", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: SRR32588727.2373596.1, SRR32588722.44246900.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA4476742, SAMEA4476749 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000020.1. On Jun 26, 2009 this sequence version replaced XP_696272.3., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 2, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NRT6;A0AC58I4E9;A0AC58I4F1;A0AC58I4F5;A0AC58I4F6;A0AC58I4H5", "ec_number_list": [ { "id": "2.7.10.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.2", "type": "external" }, { "id": "2.3.2.27", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.2.27", "type": "external" }, { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.7.11.13", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.13", "type": "external" }, { "id": "3.1.4.4", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.4.4", "type": "external" }, { "id": "2.7.10.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.1", "type": "external" }, { "id": "2.7.1.153", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.153", "type": "external" }, { "id": "2.7.1.137", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.137", "type": "external" }, { "id": "3.6.4.6", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.4.6", "type": "external" } ], "go_molecular_function": "GO:0004674 protein serine/threonine kinase activity;GO:0005524 ATP binding;GO:0016301 kinase activity", "go_cellular_component": "GO:0005737 cytoplasm", "go_biological_process": "GO:0035556 intracellular signal transduction;GO:0009267 cellular response to starvation;GO:0043408 regulation of MAPK cascade", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "A5PEY8-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A5PF33-1", "uniprot_id": [ { "id": "A5PF33_DANRE", "url": "https://www.uniprot.org/uniprot/A5PF33", "type": "external" } ], "mass": 55648.0, "length": 513, "protein_name": "F-box-like/WD repeat-containing protein TBL1XR1a isoform X1", "gene_name": "tbl1xr1a", "organism": "Zebrafish", "refseq_name": "F-box-like/WD repeat-containing protein TBL1XR1a isoform X1", "refseq_ac": [ { "id": "XP_005172880", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005172880", "type": "external" } ], "gene_names_uniprotkb": "tbl1xr1a; CH211-51H4.1; TBL1XR1; fc46g07; wu:fc46g07; zgc:110312", "gene_names_refseq": "CH211-51H4.1; TBL1XR1; fc46g07; tbl1xr1a; wu:fc46g07; zgc:110312", "protein_names_uniprotkb": "F-box-like/WD repeat-containing protein TBL1XR1a isoform X1", "protein_names_refseq": "F-box-like/WD repeat-containing protein TBL1XR1a isoform X1", "tax_id": 7955, "disease": "sensory system disease (Disease Ontology:DOID:0050155); autosomal dominant intellectual developmental disorder 41 (Disease Ontology:DOID:0070071); Pierpont syndrome (Disease Ontology:DOID:0081362)", "pathway": " (R-DRE-400206); (R-DRE-9707564)", "pathway_count": 2, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133186) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 3, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A0R4IEF7;A0A8M2BK05;F1Q648", "ec_number_list": [], "go_molecular_function": "GO:0003714 transcription corepressor activity;GO:0000976 transcription cis-regulatory region binding", "go_cellular_component": "GO:0000118 histone deacetylase complex", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006357 regulation of transcription by RNA polymerase II;GO:0045944 positive regulation of transcription by RNA polymerase II;GO:0006325 chromatin organization", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A5PF33-1", "record_type": "protein", "filter_code": "0000000.0000011.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A5PF53-1", "uniprot_id": [ { "id": "A5PF53_DANRE", "url": "https://www.uniprot.org/uniprot/A5PF53", "type": "external" } ], "mass": 171401.0, "length": 1517, "protein_name": "Rho GTPase-activating protein 35", "gene_name": "arhgap35b", "organism": "Zebrafish", "refseq_name": "rho GTPase-activating protein 35", "refseq_ac": [ { "id": "XP_003198691", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003198691", "type": "external" } ], "gene_names_uniprotkb": "arhgap35b", "gene_names_refseq": "arhgap35b", "protein_names_uniprotkb": "Rho GTPase-activating protein 35", "protein_names_refseq": "rho GTPase-activating protein 35", "tax_id": 7955, "disease": "", "pathway": " (dre:564565)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133180) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Aug 1, 2013 this sequence version replaced XP_003198691.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 2, "predicted_n_glycosites": 0, "predicted_o_glycosites": 2, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 2, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1RIM7;F1R0X6", "ec_number_list": [], "go_molecular_function": "GO:0003924 GTPase activity;GO:0005096 GTPase activator activity;GO:0005525 GTP binding;GO:0008289 lipid binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005829 cytosol;GO:0005886 plasma membrane", "go_biological_process": "GO:0050770 regulation of axonogenesis;GO:0007266 Rho protein signal transduction;GO:0008361 regulation of cell size", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A5PF53-1", "record_type": "protein", "filter_code": "0000000.0000001.010000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A5PF55-1", "uniprot_id": [ { "id": "A5PF55_DANRE", "url": "https://www.uniprot.org/uniprot/A5PF55", "type": "external" } ], "mass": 51428.0, "length": 475, "protein_name": "Transmembrane protease serine 13b isoform X1", "gene_name": "tmprss13b", "organism": "Zebrafish", "refseq_name": "transmembrane protease serine 13b isoform X1", "refseq_ac": [ { "id": "XP_005165399", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005165399", "type": "external" } ], "gene_names_uniprotkb": "tmprss13b; si:ch211-139a5.12; wu:fk84e06", "gene_names_refseq": "si:ch211-139a5.12; tmprss13b; wu:fk84e06", "protein_names_uniprotkb": "Transmembrane protease serine 13b isoform X1", "protein_names_refseq": "transmembrane protease serine 13b isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:564693)", "pathway_count": 1, "publication_count": 3, "publication_id_list": "25756310;26469318;27189481", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133180) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M2BCQ9", "ec_number_list": [], "go_molecular_function": "GO:0004252 serine-type endopeptidase activity;GO:0008236 serine-type peptidase activity", "go_cellular_component": "GO:0016020 membrane", "go_biological_process": "GO:0016485 protein processing;GO:0006508 proteolysis", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "A5PF55-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A5PF58-1", "uniprot_id": [ { "id": "A5PF58_DANRE", "url": "https://www.uniprot.org/uniprot/A5PF58", "type": "external" } ], "mass": 38402.0, "length": 351, "protein_name": "Nuclear inhibitor of protein phosphatase 1", "gene_name": "ppp1r8a", "organism": "Zebrafish", "refseq_name": "nuclear inhibitor of protein phosphatase 1", "refseq_ac": [ { "id": "NP_001094422", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001094422", "type": "external" } ], "gene_names_uniprotkb": "ppp1r8a; ppp1r8; si:ch211-206a7.1", "gene_names_refseq": "ppp1r8a; ppp1r8; si:ch211-206a7.1", "protein_names_uniprotkb": "Nuclear inhibitor of protein phosphatase 1; Protein phosphatase 1 regulatory inhibitor subunit 8", "protein_names_refseq": "nuclear inhibitor of protein phosphatase 1; protein phosphatase 1, regulatory (inhibitor) subunit 8a; protein phosphatase 1, regulatory (inhibitor) subunit 8", "tax_id": 7955, "disease": "", "pathway": " (dre:566830)", "pathway_count": 1, "publication_count": 3, "publication_id_list": "26469318;27189481;30905685", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GDQH01029343.1, GFIL01031231.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505371, SAMEA4476731 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000019.1. On Aug 12, 2007 this sequence version replaced XP_695210.1., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NDV7", "ec_number_list": [], "go_molecular_function": "GO:0004865 protein serine/threonine phosphatase inhibitor activity;GO:0003677 DNA binding;GO:0003729 mRNA binding", "go_cellular_component": "GO:0016607 nuclear speck;GO:0005681 spliceosomal complex", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006397 mRNA processing;GO:0008380 RNA splicing", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "A5PF58-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A5PLC9-1", "uniprot_id": [ { "id": "SMIM7_DANRE", "url": "https://www.uniprot.org/uniprot/A5PLC9", "type": "external" } ], "mass": 8723.0, "length": 77, "protein_name": "Small integral membrane protein 7", "gene_name": "smim7", "organism": "Zebrafish", "refseq_name": "small integral membrane protein 7 precursor", "refseq_ac": [ { "id": "NP_001185672", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001185672", "type": "external" } ], "gene_names_uniprotkb": "smim7; zgc:165531", "gene_names_refseq": "fk45g03; im:7163226; smim7; wu:fk45g03; zgc:165531", "protein_names_uniprotkb": "Small integral membrane protein 7", "protein_names_refseq": "UPF0608 protein C19orf42 homolog; small integral membrane protein 7 precursor", "tax_id": 7955, "disease": "", "pathway": " (dre:100093704)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC142848.1, CK028587.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from EH577857.1 and EH466254.1. On Nov 10, 2010 this sequence version replaced XP_002663749.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0016020 membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A5PLC9-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A5PLE2-1", "uniprot_id": [ { "id": "CYTM1_DANRE", "url": "https://www.uniprot.org/uniprot/A5PLE2", "type": "external" } ], "mass": 12516.0, "length": 118, "protein_name": "Cysteine-rich transmembrane module-containing protein 1", "gene_name": "cystm1", "organism": "Zebrafish", "refseq_name": "cysteine-rich transmembrane module-containing protein 1", "refseq_ac": [ { "id": "NP_001092236", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001092236", "type": "external" } ], "gene_names_uniprotkb": "cystm1; zgc:165573", "gene_names_refseq": "cystm1; zgc:165573", "protein_names_uniprotkb": "Cysteine-rich transmembrane module-containing protein 1", "protein_names_refseq": "UPF0467 protein C5orf32 homolog; cysteine-rich and transmembrane domain-containing protein 1; cysteine-rich transmembrane module-containing protein 1", "tax_id": 7955, "disease": "", "pathway": " (dre:100073329); (R-DRE-6798695)", "pathway_count": 2, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## CDS exon combination :: BC142871.1, EH440219.1 [ECO:0000331] RNAseq introns :: single sample supports all introns SAMEA4476750, SAMEA4476755 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC142871.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0016020 membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A5PLE2-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A5PLF5-1", "uniprot_id": [ { "id": "TM2D3_DANRE", "url": "https://www.uniprot.org/uniprot/A5PLF5", "type": "external" } ], "mass": 26772.0, "length": 244, "protein_name": "TM2 domain-containing protein 3", "gene_name": "tm2d3", "organism": "Zebrafish", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "tm2d3; zgc:165591", "gene_names_refseq": "", "protein_names_uniprotkb": "TM2 domain-containing protein 3", "protein_names_refseq": "", "tax_id": 7955, "disease": "Alzheimer's disease (Disease Ontology:DOID:10652)", "pathway": " (dre:100093711)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "Involved in the activation of Notch signaling., [UniProtKB, UniProtKB]", "predicted_glycosites": 6, "predicted_n_glycosites": 6, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 6, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0016020 membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A5PLF5-1", "record_type": "protein", "filter_code": "0000000.0000011.100000.000000000000000001.0000000010000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A5PLG0-1", "uniprot_id": [ { "id": "LYRM7_DANRE", "url": "https://www.uniprot.org/uniprot/A5PLG0", "type": "external" } ], "mass": 12206.0, "length": 104, "protein_name": "Complex III assembly factor LYRM7", "gene_name": "LYRM7", "organism": "Zebrafish", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "LYRM7; MZM1L; zgc:165597", "gene_names_refseq": "", "protein_names_uniprotkb": "Complex III assembly factor LYRM7; LYR motif-containing protein 7", "protein_names_refseq": "", "tax_id": 7955, "disease": "mitochondrial complex III deficiency nuclear type 8 (Disease Ontology:DOID:0080117); mitochondrial complex III deficiency (Disease Ontology:DOID:0111139); lactic acidosis (Disease Ontology:DOID:3650)", "pathway": " (dre:100002948); (R-DRE-9865881)", "pathway_count": 2, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "Assembly factor required for Rieske Fe-S protein UQCRFS1 incorporation into the cytochrome b-c1 (CIII) complex. Functions as a chaperone, binding to this subunit within the mitochondrial matrix and stabilizing it prior to its translocation and insertion into the late CIII dimeric intermediate within the mitochondrial inner membrane (By similarity)., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 3, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0044183 protein folding chaperone", "go_cellular_component": "GO:0005759 mitochondrial matrix", "go_biological_process": "GO:0034551 mitochondrial respiratory chain complex III assembly", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A5PLG0-1", "record_type": "protein", "filter_code": "0000000.0000011.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A5PM89-1", "uniprot_id": [ { "id": "A5PM89_DANRE", "url": "https://www.uniprot.org/uniprot/A5PM89", "type": "external" } ], "mass": 53329.0, "length": 464, "protein_name": "Sulfotransferase", "gene_name": "chst2a", "organism": "Zebrafish", "refseq_name": "carbohydrate sulfotransferase 2a", "refseq_ac": [ { "id": "NP_001073464", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001073464", "type": "external" } ], "gene_names_uniprotkb": "chst2a; chst2; wu:fj55f04; zgc:154070", "gene_names_refseq": "chst2a; chst2; wu:fj55f04; zgc:154070", "protein_names_uniprotkb": "Sulfotransferase; 2.8.2.-", "protein_names_refseq": "carbohydrate sulfotransferase 2a; carbohydrate sulfotransferase 2", "tax_id": 7955, "disease": "", "pathway": " (dre:561896)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "26469318;28252024", "class_list": "", "function": "##Evidence-Data-START## Transcript is intronless :: SRR32588734.3074220.1, SRR32588717.31133881.1 [ECO:0000345] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000002.1. On May 1, 2009 this sequence version replaced NP_001073464.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8N1TQ63", "ec_number_list": [ { "id": "2.8.2.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.8.2.-", "type": "external" } ], "go_molecular_function": "GO:0001517 N-acetylglucosamine 6-O-sulfotransferase activity", "go_cellular_component": "GO:0000139 Golgi membrane;GO:0005802 trans-Golgi network", "go_biological_process": "GO:0006044 N-acetylglucosamine metabolic process;GO:0006954 inflammatory response;GO:0005975 carbohydrate metabolic process;GO:0006790 sulfur compound metabolic process", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "A5PM89-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A5PMB0-1", "uniprot_id": [ { "id": "A5PMB0_DANRE", "url": "https://www.uniprot.org/uniprot/A5PMB0", "type": "external" } ], "mass": 64712.0, "length": 580, "protein_name": "Zinc finger and BTB domain-containing protein 10", "gene_name": "zbtb10", "organism": "Zebrafish", "refseq_name": "zinc finger and BTB domain-containing protein 10", "refseq_ac": [ { "id": "NP_001122011", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001122011", "type": "external" } ], "gene_names_uniprotkb": "zbtb10; sb:cb299; si:dkeyp-34f6.1", "gene_names_refseq": "sb:cb299; si:dkeyp-34f6.1; zbtb10", "protein_names_uniprotkb": "Zinc finger and BTB domain-containing protein 10", "protein_names_refseq": "zinc finger and BTB domain-containing protein 10", "tax_id": 7955, "disease": "", "pathway": " (dre:566269)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "26469318;27189481", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GDQH01008356.1, GDQQ01037323.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505373, SAMEA3505383 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000019.1. On Jul 31, 2008 this sequence version replaced XP_001923729.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NHI8", "ec_number_list": [], "go_molecular_function": "GO:0008270 zinc ion binding;GO:0000977 RNA polymerase II transcription regulatory region sequence-specific DNA binding;GO:0001227 DNA-binding transcription repressor activity, RNA polymerase II-specific", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0000122 negative regulation of transcription by RNA polymerase II;GO:0006351 DNA-templated transcription", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "A5PMB0-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A5PMF1-1", "uniprot_id": [ { "id": "A5PMF1_DANRE", "url": "https://www.uniprot.org/uniprot/A5PMF1", "type": "external" } ], "mass": 63945.0, "length": 563, "protein_name": "Adenylate kinase isoenzyme 5", "gene_name": "ak5", "organism": "Zebrafish", "refseq_name": "adenylate kinase isoenzyme 5", "refseq_ac": [ { "id": "NP_001093554", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001093554", "type": "external" } ], "gene_names_uniprotkb": "ak5; wu:fj63a06", "gene_names_refseq": "ak5; wu:fj63a06", "protein_names_uniprotkb": "Adenylate kinase isoenzyme 5; 2.7.4.3; ATP-AMP transphosphorylase 5", "protein_names_refseq": "adenylate kinase isoenzyme 5", "tax_id": 7955, "disease": "", "pathway": " (dre:100003595); (R-DRE-499943)", "pathway_count": 2, "publication_count": 4, "publication_id_list": "26469318;27189481;27903883;28252024", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GFIL01015079.1, GDQH01018478.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505374, SAMEA3505376 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000002.1. On Aug 24, 2007 this sequence version replaced XP_001343107.1., [RefSeq]; Nucleoside monophosphate (NMP) kinase that catalyzes the reversible transfer of the terminal phosphate group between nucleoside triphosphates and monophosphates. Active on AMP and dAMP with ATP as a donor. When GTP is used as phosphate donor, the enzyme phosphorylates AMP, CMP, and to a small extent dCMP. Also displays broad nucleoside diphosphate kinase activity., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NDR5", "ec_number_list": [ { "id": "2.7.4.3", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.4.3", "type": "external" }, { "id": "2.7.4.6", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.4.6", "type": "external" }, { "id": "2.7.4.9", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.4.9", "type": "external" }, { "id": "2.7.4.14", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.4.14", "type": "external" } ], "go_molecular_function": "GO:0004017 AMP kinase activity;GO:0005524 ATP binding;GO:0004550 nucleoside diphosphate kinase activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005829 cytosol", "go_biological_process": "GO:0060271 cilium assembly", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "A5PMF1-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A5PMF7-1", "uniprot_id": [ { "id": "NXNL1_DANRE", "url": "https://www.uniprot.org/uniprot/A5PMF7", "type": "external" } ], "mass": 25133.0, "length": 215, "protein_name": "Nucleoredoxin-like protein 1", "gene_name": "nxnl1", "organism": "Zebrafish", "refseq_name": "nucleoredoxin-like protein 1", "refseq_ac": [ { "id": "NP_001104230", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001104230", "type": "external" } ], "gene_names_uniprotkb": "nxnl1; si:ch211-114l13.8", "gene_names_refseq": "nxnl1; si:ch211-114l13.8; si:dkey-156m2.6", "protein_names_uniprotkb": "Nucleoredoxin-like protein 1", "protein_names_refseq": "nucleoredoxin-like protein 1", "tax_id": 7955, "disease": "", "pathway": " (dre:567911)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "23594743", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: EB959656.1, SRR32588719.13490685.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505388, SAMEA4476732 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000001.1. On Nov 18, 2007 this sequence version replaced XP_696316.1., [RefSeq]; Thioredoxin-like protein that may protect retinal rod and cone photoreceptors against oxidative stress and photo-oxidative damage., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005739 mitochondrion", "go_biological_process": "GO:0006979 response to oxidative stress;GO:0045494 photoreceptor cell maintenance;GO:0045454 cell redox homeostasis;GO:0080183 response to photooxidative stress", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "A5PMF7-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A5PMN5-1", "uniprot_id": [ { "id": "A5PMN5_DANRE", "url": "https://www.uniprot.org/uniprot/A5PMN5", "type": "external" } ], "mass": 48806.0, "length": 438, "protein_name": "Acyl-CoA thioesterase 17", "gene_name": "acot17", "organism": "Zebrafish", "refseq_name": "acyl-CoA thioesterase 17", "refseq_ac": [ { "id": "NP_998412", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_998412", "type": "external" } ], "gene_names_uniprotkb": "acot17; wu:fc48e10; zgc:77651", "gene_names_refseq": "acot17; wu:fc48e10; zgc:77651", "protein_names_uniprotkb": "Acyl-CoA thioesterase 17", "protein_names_refseq": "acyl-CoA thioesterase 17; peroxisomal acyl-CoA thioesterase-like", "tax_id": 7955, "disease": "", "pathway": " (dre:572757); (R-DRE-390247); (R-DRE-77289); (R-DRE-9837999)", "pathway_count": 4, "publication_count": 1, "publication_id_list": "19200601", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC152651.1, SRR32588714.9151895.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA898401, SAMEA898403 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from EB796040.1, CF348542.1, EH590856.1, BC152651.1, AI877534.1 and JBMGRA010000004.1. On or before Mar 16, 2008 this sequence version replaced XP_707450.1, NP_998412.1. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8N1TRK1", "ec_number_list": [], "go_molecular_function": "GO:0047617 fatty acyl-CoA hydrolase activity;GO:0016790 thiolester hydrolase activity", "go_cellular_component": "", "go_biological_process": "GO:0006631 fatty acid metabolic process;GO:0006637 acyl-CoA metabolic process", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "A5PMN5-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A5PMR0-1", "uniprot_id": [ { "id": "A5PMR0_DANRE", "url": "https://www.uniprot.org/uniprot/A5PMR0", "type": "external" } ], "mass": 96884.0, "length": 871, "protein_name": "ZZ-type zinc finger-containing protein 3", "gene_name": "zzz3", "organism": "Zebrafish", "refseq_name": "ZZ-type zinc finger-containing protein 3", "refseq_ac": [ { "id": "NP_001093497", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001093497", "type": "external" } ], "gene_names_uniprotkb": "zzz3; fj98c02; si:ch211-284g18.3; wu:fj98c02", "gene_names_refseq": "fj98c02; si:ch211-284g18.3; wu:fj98c02; zzz3", "protein_names_uniprotkb": "ZZ-type zinc finger-containing protein 3", "protein_names_refseq": "ZZ-type zinc finger-containing protein 3", "tax_id": 7955, "disease": "", "pathway": " (dre:567022)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "15520368;26469318", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: SRR32588735.2113159.1, SRR32588722.7696952.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000002.1. On Jul 26, 2007 this sequence version replaced XP_695399.2., [RefSeq]; Histone H3 reader that is required for the ATAC complex-mediated maintenance of histone acetylation and gene activation. Component of the ATAC complex, a complex with histone acetyltransferase activity on histones H3 and H4., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NF87", "ec_number_list": [], "go_molecular_function": "GO:0003677 DNA binding;GO:0008270 zinc ion binding", "go_cellular_component": "GO:0140672 ATAC complex", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0051726 regulation of cell cycle;GO:0051302 regulation of cell division", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "A5PMR0-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A5PMT9-1", "uniprot_id": [ { "id": "A5PMT9_DANRE", "url": "https://www.uniprot.org/uniprot/A5PMT9", "type": "external" } ], "mass": 43069.0, "length": 375, "protein_name": "C-C chemokine receptor type 6a", "gene_name": "ccr6a", "organism": "Zebrafish", "refseq_name": "C-C chemokine receptor type 6a", "refseq_ac": [ { "id": "NP_001093461", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001093461", "type": "external" } ], "gene_names_uniprotkb": "ccr6a; si:bx813304.1; si:dkey-47g2.1; zgc:86782", "gene_names_refseq": "ccr6a; si:bx813304.1; si:dkey-47g2.1; zgc:86782", "protein_names_uniprotkb": "C-C chemokine receptor type 6a", "protein_names_refseq": "C-C chemokine receptor type 6a; zfCCR6-2", "tax_id": 7955, "disease": "exanthem (Disease Ontology:DOID:0050486); primary cutaneous T-cell non-Hodgkin lymphoma (Disease Ontology:DOID:0060061); fungal infectious disease (Disease Ontology:DOID:1564); breast cancer (Disease Ontology:DOID:1612); IgA glomerulonephritis (Disease Ontology:DOID:2986); systemic scleroderma (Disease Ontology:DOID:418); psoriasis (Disease Ontology:DOID:8893)", "pathway": " (dre:558616); (R-DRE-380108); (R-DRE-418594)", "pathway_count": 3, "publication_count": 6, "publication_id_list": "16365434;19022503;23145839;31053140;32344637;34208966", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GFIL01003402.1, GDQQ01025287.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505372 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000020.1. On Jul 26, 2007 this sequence version replaced XP_686937.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 7, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NDZ3", "ec_number_list": [], "go_molecular_function": "GO:0016493 C-C chemokine receptor activity;GO:0019957 C-C chemokine binding", "go_cellular_component": "GO:0009897 external side of plasma membrane", "go_biological_process": "GO:0006955 immune response;GO:0007204 positive regulation of cytosolic calcium ion concentration;GO:0019722 calcium-mediated signaling;GO:0060326 cell chemotaxis", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "A5PMT9-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A5PMV7-1", "uniprot_id": [ { "id": "A5PMV7_DANRE", "url": "https://www.uniprot.org/uniprot/A5PMV7", "type": "external" } ], "mass": 65423.0, "length": 589, "protein_name": "3.1.3.16; Protein phosphatase 2, regulatory subunit A, beta a", "gene_name": "ppp2r1ba", "organism": "Zebrafish", "refseq_name": "protein phosphatase 2, regulatory subunit A, beta a", "refseq_ac": [ { "id": "NP_001299846", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001299846", "type": "external" } ], "gene_names_uniprotkb": "ppp2r1ba; ppp2r1a; wu:fa02h04; zgc:56296", "gene_names_refseq": "ppp2r1a; ppp2r1ba; wu:fa02h04; zgc:56296", "protein_names_uniprotkb": "3.1.3.16; Protein phosphatase 2, regulatory subunit A, beta a", "protein_names_refseq": "protein phosphatase 2, regulatory subunit A, alpha; protein phosphatase 2, regulatory subunit A, beta a", "tax_id": 7955, "disease": "lung cancer (Disease Ontology:DOID:1324)", "pathway": " (dre:406685); (R-DRE-113501); (R-DRE-1295596); (R-DRE-141430); (R-DRE-141444); (R-DRE-180024); (R-DRE-195253); (R-DRE-196299); (R-DRE-198753); (R-DRE-202670); (R-DRE-2467813); (R-DRE-2500257); (R-DRE-2995383); (R-DRE-380320); (R-DRE-5663220); (R-DRE-6811558); (R-DRE-69231); (R-DRE-69273); (R-DRE-975957); (R-DRE-9860927)", "pathway_count": 20, "publication_count": 4, "publication_id_list": "16109975;26469318;28252024;36292952", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GDQH01003597.1, SRR26395062.1572015.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000005.1. On Sep 1, 2015 this sequence version replaced XP_005165604.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1P1V9", "ec_number_list": [ { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "3.1.-.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.-.-", "type": "external" }, { "id": "3.1.3.16", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.16", "type": "external" }, { "id": "2.7.11.24", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.24", "type": "external" }, { "id": "3.6.4.12", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.4.12", "type": "external" }, { "id": "2.7.11.26", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.26", "type": "external" }, { "id": "5.6.2.3", "url": "https://www.rhea-db.org/rhea/?query=ec:5.6.2.3", "type": "external" }, { "id": "5.6.2.5", "url": "https://www.rhea-db.org/rhea/?query=ec:5.6.2.5", "type": "external" }, { "id": "2.7.10.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.2", "type": "external" }, { "id": "3.6.4.13", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.4.13", "type": "external" }, { "id": "2.7.11.21", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.21", "type": "external" } ], "go_molecular_function": "GO:0004722 protein serine/threonine phosphatase activity;GO:0019888 protein phosphatase regulator activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005829 cytosol;GO:0000159 protein phosphatase type 2A complex", "go_biological_process": "GO:0051754 meiotic sister chromatid cohesion, centromeric;GO:0051225 spindle assembly", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "A5PMV7-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A5PMZ3-1", "uniprot_id": [ { "id": "A5PMZ3_DANRE", "url": "https://www.uniprot.org/uniprot/A5PMZ3", "type": "external" } ], "mass": 79467.0, "length": 720, "protein_name": "Macrophage-capping protein", "gene_name": "scinlb", "organism": "Zebrafish", "refseq_name": "scinderin like b", "refseq_ac": [ { "id": "NP_998255", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_998255", "type": "external" } ], "gene_names_uniprotkb": "scinlb; wu:fe16f08; zgc:77481", "gene_names_refseq": "scinlb; wu:fe16f08; zgc:77481", "protein_names_uniprotkb": "Macrophage-capping protein; Actin regulatory protein CAP-G", "protein_names_refseq": "scinderin like b", "tax_id": 7955, "disease": "", "pathway": " (dre:406363)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "17548429;19681161;23072875;25014315;25692557;28252024;28327131;32427565;32867764;36791723", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GDQH01000433.1, BC066531.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000002.1. On Apr 9, 2014 this sequence version replaced NP_998255.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications., [RefSeq]; Data show that scinla and scinlb have different expression patterns and developmental roles during zebrafish development., [RefSeq, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1PEJ5", "ec_number_list": [], "go_molecular_function": "GO:0005546 phosphatidylinositol-4,5-bisphosphate binding;GO:0051015 actin filament binding", "go_cellular_component": "GO:0005634 nucleus;GO:0015629 actin cytoskeleton;GO:0030027 lamellipodium;GO:0042470 melanosome;GO:0001726 ruffle", "go_biological_process": "GO:0007417 central nervous system development;GO:0051016 barbed-end actin filament capping;GO:0008154 actin polymerization or depolymerization;GO:0051014 actin filament severing;GO:0030031 cell projection assembly", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "A5PMZ3-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A5PN22-1", "uniprot_id": [ { "id": "A5PN22_DANRE", "url": "https://www.uniprot.org/uniprot/A5PN22", "type": "external" } ], "mass": 99628.0, "length": 904, "protein_name": "WD repeat-containing protein 44", "gene_name": "wdr44", "organism": "Zebrafish", "refseq_name": "WD repeat-containing protein 44", "refseq_ac": [ { "id": "NP_001093508", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001093508", "type": "external" } ], "gene_names_uniprotkb": "wdr44; sb:eu546; si:ch211-1c14.1; wu:fj86d11", "gene_names_refseq": "sb:eu546; si:ch211-1c14.1; wdr44; wu:fj86d11", "protein_names_uniprotkb": "WD repeat-containing protein 44", "protein_names_refseq": "WD repeat domain 44 protein; WD repeat-containing protein 44", "tax_id": 7955, "disease": "", "pathway": " (dre:569045)", "pathway_count": 1, "publication_count": 3, "publication_id_list": "26469318;31204173;38191484", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GFIL01024237.1, GDQQ01007545.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000005.1. On Jul 26, 2007 this sequence version replaced XP_697499.2., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NE21;A0AC58JKE7", "ec_number_list": [], "go_molecular_function": "GO:0140313 molecular sequestering activity", "go_cellular_component": "GO:0005794 Golgi apparatus;GO:0010008 endosome membrane", "go_biological_process": "GO:0060627 regulation of vesicle-mediated transport;GO:0061824 cytosolic ciliogenesis", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "A5PN22-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A5PN38-1", "uniprot_id": [ { "id": "F151A_DANRE", "url": "https://www.uniprot.org/uniprot/A5PN38", "type": "external" } ], "mass": 68041.0, "length": 599, "protein_name": "Protein FAM151A", "gene_name": "fam151a", "organism": "Zebrafish", "refseq_name": "protein FAM151A", "refseq_ac": [ { "id": "NP_001093565", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001093565", "type": "external" } ], "gene_names_uniprotkb": "fam151a; si:ch211-215b16.4", "gene_names_refseq": "fam151a; si:ch211-215b16.4", "protein_names_uniprotkb": "Protein FAM151A", "protein_names_refseq": "protein FAM151A", "tax_id": 7955, "disease": "colorectal adenocarcinoma (Disease Ontology:DOID:0050861)", "pathway": " (dre:100005645)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "23594743", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GDQQ01004876.1, GFIL01010132.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000002.1. On Jul 26, 2007 this sequence version replaced XP_001344642.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005615 extracellular space;GO:0016020 membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "A5PN38-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A5PN39-1", "uniprot_id": [ { "id": "A5PN39_DANRE", "url": "https://www.uniprot.org/uniprot/A5PN39", "type": "external" } ], "mass": 34569.0, "length": 328, "protein_name": "Zeta-crystallin", "gene_name": "cryz", "organism": "Zebrafish", "refseq_name": "quinone oxidoreductase", "refseq_ac": [ { "id": "NP_001093446", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001093446", "type": "external" } ], "gene_names_uniprotkb": "cryz; wu:fq09a05; zgc:110776", "gene_names_refseq": "cryz; wu:fq09a05; zgc:110776", "protein_names_uniprotkb": "Zeta-crystallin; 1.6.5.5; NADPH:quinone reductase", "protein_names_refseq": "quinone oxidoreductase", "tax_id": 7955, "disease": "", "pathway": " (dre:407640)", "pathway_count": 1, "publication_count": 3, "publication_id_list": "26469318;28252024;34016526", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC090697.1, GDQQ01001170.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505373 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000002.1. On or before May 1, 2013 this sequence version replaced NP_001019546.1, XP_701943.1., [RefSeq]; Multifunctional crystallin endowed with unrelated mRNA stabilization and enzymatic oxidoreductase activities. Binds (AU)-rich elements (ARE) in the 3'-UTR of target mRNA to enhance their stability. Upon metabolic acidosis, stabilizes the mRNA encoding SLC12A1 a cotransporter involved in transepithelial NH4(+) reabsorption in the medullary thick ascending limb in kidney. In response to acidosis, also participates to the adaptive increase in renal ammoniagenesis by stabilizing the mRNAs of enzymes involved in glutamine catabolism. By the same mechanism, it also regulates the expression of the antiapoptotic protein BCL2. Beside its mRNA stabilization activity, also catalyzes the reduction of orthoquinones such as 1,2-naphthoquinone or 9,10-phenanthrenequinone in the presence of NADPH in vitro and could be involved in the detoxification of xenobiotics and protection against oxidative stress., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NDY4", "ec_number_list": [ { "id": "1.6.5.5", "url": "https://www.rhea-db.org/rhea/?query=ec:1.6.5.5", "type": "external" } ], "go_molecular_function": "GO:0008270 zinc ion binding;GO:0003960 quinone reductase (NADPH) activity;GO:0003730 mRNA 3'-UTR binding;GO:0070402 NADPH binding", "go_cellular_component": "GO:0005829 cytosol", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "A5PN39-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A5PN52-1", "uniprot_id": [ { "id": "HOATZ_DANRE", "url": "https://www.uniprot.org/uniprot/A5PN52", "type": "external" } ], "mass": 19187.0, "length": 164, "protein_name": "Cilia- and flagella-associated protein HOATZ", "gene_name": "hoatz", "organism": "Zebrafish", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "hoatz; si:dkey-27p23.3", "gene_names_refseq": "", "protein_names_uniprotkb": "Cilia- and flagella-associated protein HOATZ", "protein_names_refseq": "", "tax_id": 7955, "disease": "", "pathway": " (dre:566423)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "23594743", "class_list": "", "function": "May be required for motile ciliogenesis and flagellar genesis., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005929 cilium", "go_biological_process": "GO:0060271 cilium assembly", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "A5PN52-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A5PN55-1", "uniprot_id": [ { "id": "A5PN55_DANRE", "url": "https://www.uniprot.org/uniprot/A5PN55", "type": "external" } ], "mass": 64932.0, "length": 581, "protein_name": "Malic enzyme", "gene_name": "me2", "organism": "Zebrafish", "refseq_name": "NAD-dependent malic enzyme, mitochondrial", "refseq_ac": [ { "id": "NP_001003627", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001003627", "type": "external" } ], "gene_names_uniprotkb": "me2; zgc:100941", "gene_names_refseq": "me2; zgc:100941", "protein_names_uniprotkb": "Malic enzyme", "protein_names_refseq": "NAD-dependent malic enzyme, mitochondrial", "tax_id": 7955, "disease": "", "pathway": " (dre:445233); (R-DRE-70268); (R-DRE-9837999)", "pathway_count": 3, "publication_count": 2, "publication_id_list": "27806088;28252024", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC078317.1, GDQH01004834.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## ##RefSeq-Attributes-START## gene product(s) localized to mito. :: inferred from homology ##RefSeq-Attributes-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000005.1. On or before May 16, 2009 this sequence version replaced NP_001121871.1, NP_001003627.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]; NAD-dependent mitochondrial malic enzyme that catalyzes the oxidative decarboxylation of malate to pyruvate., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1N1R5;A0AC58JIG3", "ec_number_list": [], "go_molecular_function": "GO:0046872 metal ion binding;GO:0051287 NAD binding;GO:0004471 malate dehydrogenase (decarboxylating) (NAD+) activity;GO:0004473 malate dehydrogenase (decarboxylating) (NADP+) activity", "go_cellular_component": "GO:0005739 mitochondrion;GO:0005759 mitochondrial matrix", "go_biological_process": "GO:0006108 malate metabolic process", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "A5PN55-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A5WUN8-1", "uniprot_id": [ { "id": "A5WUN8_DANRE", "url": "https://www.uniprot.org/uniprot/A5WUN8", "type": "external" } ], "mass": 34195.0, "length": 309, "protein_name": "Phospholipid phosphatase-related protein type 5", "gene_name": "plppr5a", "organism": "Zebrafish", "refseq_name": "phospholipid phosphatase-related protein type 5a", "refseq_ac": [ { "id": "NP_001121841", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001121841", "type": "external" } ], "gene_names_uniprotkb": "plppr5a; lppr5a; si:dkey-108c13.2", "gene_names_refseq": "lppr5a; plppr5a; si:dkey-108c13.2", "protein_names_uniprotkb": "Phospholipid phosphatase-related protein type 5; Lipid phosphate phosphatase-related protein type 5", "protein_names_refseq": "PRG5B; lipid phosphate phosphatase-related protein type 5-like; lipid phosphate phosphatase-related protein type 5a; phospholipid phosphatase-related protein type 5a", "tax_id": 7955, "disease": "", "pathway": " (dre:100006660); (R-DRE-419408)", "pathway_count": 2, "publication_count": 1, "publication_id_list": "22855693", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GDQQ01053047.1, SRR32588729.13251342.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000002.1. On Jul 31, 2008 this sequence version replaced XP_001345343.2., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NHY4", "ec_number_list": [], "go_molecular_function": "GO:0008195 phosphatidate phosphatase activity", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "GO:0007165 signal transduction;GO:0006644 phospholipid metabolic process;GO:0046839 phospholipid dephosphorylation", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "A5WUN8-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A5WUY2-1", "uniprot_id": [ { "id": "A5WUY2_DANRE", "url": "https://www.uniprot.org/uniprot/A5WUY2", "type": "external" } ], "mass": 31290.0, "length": 269, "protein_name": "deoxyguanosine kinase", "gene_name": "dguok", "organism": "Zebrafish", "refseq_name": "deoxyguanosine kinase, mitochondrial", "refseq_ac": [ { "id": "NP_001093561", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001093561", "type": "external" } ], "gene_names_uniprotkb": "dguok; zgc:86625", "gene_names_refseq": "dguok; zgc:86625", "protein_names_uniprotkb": "deoxyguanosine kinase; 2.7.1.113", "protein_names_refseq": "deoxyguanosine kinase, mitochondrial", "tax_id": 7955, "disease": "mitochondrial DNA depletion syndrome 3 (Disease Ontology:DOID:0080121); autosomal recessive progressive external ophthalmoplegia with mitochondrial DNA deletions 4 (Disease Ontology:DOID:0111516); portal hypertension (Disease Ontology:DOID:10762); mitochondrial metabolism disease (Disease Ontology:DOID:700)", "pathway": " (dre:100005067); (R-DRE-74217)", "pathway_count": 2, "publication_count": 3, "publication_id_list": "27189481;29228146;30428046", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC153449.1, GDQH01023277.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## ##RefSeq-Attributes-START## gene product(s) localized to mito. :: inferred from homology ##RefSeq-Attributes-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000005.1. On Jun 5, 2025 this sequence version replaced NP_001093561.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 4, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NDS2", "ec_number_list": [ { "id": "2.7.1.113", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.113", "type": "external" } ], "go_molecular_function": "GO:0004138 deoxyguanosine kinase activity;GO:0005524 ATP binding;GO:0016301 kinase activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005739 mitochondrion", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "A5WUY2-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A5WVU0-1", "uniprot_id": [ { "id": "A5WVU0_DANRE", "url": "https://www.uniprot.org/uniprot/A5WVU0", "type": "external" } ], "mass": 55189.0, "length": 510, "protein_name": "F-box-like/WD repeat-containing protein TBL1XR1b", "gene_name": "tbl1xr1b", "organism": "Zebrafish", "refseq_name": "F-box-like/WD repeat-containing protein TBL1XR1b", "refseq_ac": [ { "id": "NP_001313469", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001313469", "type": "external" } ], "gene_names_uniprotkb": "tbl1xr1b; tbl1xr1; zgc:63617", "gene_names_refseq": "tbl1xr1b; tbl1xr1; zgc:63617", "protein_names_uniprotkb": "F-box-like/WD repeat-containing protein TBL1XR1b", "protein_names_refseq": "F-box-like/WD repeat-containing protein TBL1XR1b; tbl1x receptor 1b; transducin (beta)-like 1 X-linked receptor 1b; transducin (beta)-like 1 X-linked receptor 1", "tax_id": 7955, "disease": "autosomal dominant intellectual developmental disorder 41 (Disease Ontology:DOID:0070071); Pierpont syndrome (Disease Ontology:DOID:0081362)", "pathway": " (dre:393581)", "pathway_count": 1, "publication_count": 3, "publication_id_list": "26469318;31053140;33728688", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: SRR5865382.23400.1, SRR26395062.1362362.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000002.1. On May 20, 2016 this sequence version replaced XP_005163334.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 2, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1P8S5;A0AC58GIS3;A0AC58GIT5", "ec_number_list": [], "go_molecular_function": "GO:0003714 transcription corepressor activity;GO:0000976 transcription cis-regulatory region binding", "go_cellular_component": "GO:0000118 histone deacetylase complex", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006357 regulation of transcription by RNA polymerase II;GO:0045944 positive regulation of transcription by RNA polymerase II;GO:0006325 chromatin organization", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "A5WVU0-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A5WVU9-1", "uniprot_id": [ { "id": "TRIQK_DANRE", "url": "https://www.uniprot.org/uniprot/A5WVU9", "type": "external" } ], "mass": 9500.0, "length": 84, "protein_name": "Triple QxxK/R motif-containing protein", "gene_name": "triqk", "organism": "Zebrafish", "refseq_name": "triple QxxK/R motif-containing protein", "refseq_ac": [ { "id": "NP_001120728", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001120728", "type": "external" } ], "gene_names_uniprotkb": "triqk; si:ch211-160k22.1", "gene_names_refseq": "si:ch211-160k22.1; triqk", "protein_names_uniprotkb": "Triple QxxK/R motif-containing protein; Triple repetitive-sequence of QXXK/R protein homolog", "protein_names_refseq": "protein TRIQK; triple QxxK/R motif-containing protein; triple repetitive-sequence of QXXK/R protein homolog", "tax_id": 7955, "disease": "", "pathway": " (dre:100147776)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "18828657;23594743", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GDQH01011295.1, EH570229.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from EH570229.1, EH508501.1, DR717232.1 and JBMGRA010000019.1. On Jul 28, 2011 this sequence version replaced NP_001120728.1. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments., [RefSeq]; May play a role in cell growth and maintenance of cell morphology., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "B2B9E2", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005789 endoplasmic reticulum membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "A5WVU9-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A5WVX1-1", "uniprot_id": [ { "id": "EFNMT_DANRE", "url": "https://www.uniprot.org/uniprot/A5WVX1", "type": "external" } ], "mass": 76025.0, "length": 690, "protein_name": "eEF1A lysine and N-terminal methyltransferase", "gene_name": "mettl13", "organism": "Zebrafish", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "mettl13; eef1aknmt; si:dkey-19f21.2; zgc:152769", "gene_names_refseq": "", "protein_names_uniprotkb": "eEF1A lysine and N-terminal methyltransferase; Methyltransferase-like protein 13", "protein_names_refseq": "", "tax_id": 7955, "disease": "cancer (Disease Ontology:DOID:162)", "pathway": " (dre:557908)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "23594743;25253178;25792259;26469318;27189481;29408807;36553541", "class_list": "", "function": "Dual methyltransferase that catalyzes methylation of elongation factor 1-alpha (eef1a1 and eef1a2) at two different positions, and is therefore involved in the regulation of mRNA translation. Via its C-terminus, methylates the N-terminus of eef1a1 and eef1a2. Via its N-terminus dimethylates lysine residues of eef1a1 and eef1a2., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q567H9", "ec_number_list": [ { "id": "2.1.1.361", "url": "https://www.rhea-db.org/rhea/?query=ec:2.1.1.361", "type": "external" }, { "id": "2.1.1.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.1.1.-", "type": "external" }, { "id": "2.1.1.354", "url": "https://www.rhea-db.org/rhea/?query=ec:2.1.1.354", "type": "external" }, { "id": "2.1.1.364", "url": "https://www.rhea-db.org/rhea/?query=ec:2.1.1.364", "type": "external" }, { "id": "2.1.1.359", "url": "https://www.rhea-db.org/rhea/?query=ec:2.1.1.359", "type": "external" }, { "id": "2.1.1.355", "url": "https://www.rhea-db.org/rhea/?query=ec:2.1.1.355", "type": "external" }, { "id": "2.1.1.362", "url": "https://www.rhea-db.org/rhea/?query=ec:2.1.1.362", "type": "external" } ], "go_molecular_function": "GO:0016279 protein-lysine N-methyltransferase activity;GO:0008168 methyltransferase activity", "go_cellular_component": "", "go_biological_process": "GO:0032259 methylation", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "A5WVX1-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A5WW31-1", "uniprot_id": [ { "id": "A5WW31_DANRE", "url": "https://www.uniprot.org/uniprot/A5WW31", "type": "external" } ], "mass": 26756.0, "length": 240, "protein_name": "S100 calcium binding protein U", "gene_name": "s100u", "organism": "Zebrafish", "refseq_name": "S100 calcium binding protein U", "refseq_ac": [ { "id": "NP_001121813", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001121813", "type": "external" } ], "gene_names_uniprotkb": "s100u; fc27g02; si:dkey-105n5.2; wu:fc27g02", "gene_names_refseq": "fc27g02; s100u; si:dkey-105n5.2; wu:fc27g02", "protein_names_uniprotkb": "S100 calcium binding protein U", "protein_names_refseq": "S100 calcium binding protein U", "tax_id": 7955, "disease": "", "pathway": " (dre:563060)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "18275604;26469318;27189481;28252024;31546038", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC128875.1, SRR26395015.483633.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000019.1. On Jul 31, 2008 this sequence version replaced XP_691510.3., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NJX2", "ec_number_list": [], "go_molecular_function": "GO:0048306 calcium-dependent protein binding;GO:0005509 calcium ion binding", "go_cellular_component": "GO:0005615 extracellular space;GO:0048471 perinuclear region of cytoplasm", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "A5WW31-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A5WW32-1", "uniprot_id": [ { "id": "A5WW32_DANRE", "url": "https://www.uniprot.org/uniprot/A5WW32", "type": "external" } ], "mass": 13546.0, "length": 122, "protein_name": "Protein S100", "gene_name": "s100s", "organism": "Zebrafish", "refseq_name": "S100 calcium binding protein S isoform 2", "refseq_ac": [ { "id": "NP_001003989", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001003989", "type": "external" } ], "gene_names_uniprotkb": "s100s; zgc:91995", "gene_names_refseq": "s100s; zgc:91995", "protein_names_uniprotkb": "Protein S100; S100 calcium-binding protein", "protein_names_refseq": "S100 calcium binding protein S isoform 2", "tax_id": 7955, "disease": "", "pathway": " (dre:445481)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "17618610;18275604;26469318;26494580;31546038;31582816;32109392;33377867;33979209;36543769", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC080247.1, SRR26395063.526951.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505376, SAMEA3505377 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000019.1. On Jun 26, 2024 this sequence version replaced NP_001003989.1., [RefSeq]; The distribution of S100 protein in mechanosensory (neuromasts of the lateral line system; maculae and cristae ampullaris of the inner ear) and chemosensory (superficial and oral taste buds; olfactory epithelium) cells in adult zebrafish (Danio rerio)., [RefSeq, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M2B6E8", "ec_number_list": [], "go_molecular_function": "GO:0046914 transition metal ion binding;GO:0048306 calcium-dependent protein binding;GO:0005509 calcium ion binding", "go_cellular_component": "GO:0005737 cytoplasm", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "A5WW32-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A5WWB6-1", "uniprot_id": [ { "id": "ZWILC_DANRE", "url": "https://www.uniprot.org/uniprot/A5WWB6", "type": "external" } ], "mass": 66078.0, "length": 583, "protein_name": "Protein zwilch homolog", "gene_name": "zwilch", "organism": "Zebrafish", "refseq_name": "protein zwilch homolog", "refseq_ac": [ { "id": "NP_001186664", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001186664", "type": "external" } ], "gene_names_uniprotkb": "zwilch; si:ch211-242m18.4; si:ch73-94f11.1", "gene_names_refseq": "si:ch211-242m18.4; wu:fb10f09; zwilch", "protein_names_uniprotkb": "Protein zwilch homolog", "protein_names_refseq": "Zwilch, kinetochore associated, homolog; protein zwilch homolog", "tax_id": 7955, "disease": "", "pathway": " (dre:336439); (R-DRE-141430); (R-DRE-141444); (R-DRE-2467813); (R-DRE-2500257); (R-DRE-5663220)", "pathway_count": 6, "publication_count": 1, "publication_id_list": "23594743", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC095837.1, GDQH01032824.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA4476728, SAMEA4476731 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000018.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]; Essential component of the mitotic checkpoint, which prevents cells from prematurely exiting mitosis. Required for the assembly of the dynein-dynactin and mad1-mad2 complexes onto kinetochores (By similarity)., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q1JQ30;Q501W8", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:1990423 RZZ complex", "go_biological_process": "GO:0051301 cell division;GO:0007094 mitotic spindle assembly checkpoint signaling;GO:0034501 protein localization to kinetochore", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "A5WWB6-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A5WWC6-1", "uniprot_id": [ { "id": "HSDL1_DANRE", "url": "https://www.uniprot.org/uniprot/A5WWC6", "type": "external" } ], "mass": 35124.0, "length": 319, "protein_name": "Inactive hydroxysteroid dehydrogenase-like protein 1", "gene_name": "hsdl1", "organism": "Zebrafish", "refseq_name": "inactive hydroxysteroid dehydrogenase-like protein 1", "refseq_ac": [ { "id": "NP_001008607", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001008607", "type": "external" } ], "gene_names_uniprotkb": "hsdl1; si:ch211-172b19.1; zgc:103498", "gene_names_refseq": "hsdl1; si:ch211-172b19.1; zgc:103498", "protein_names_uniprotkb": "Inactive hydroxysteroid dehydrogenase-like protein 1", "protein_names_refseq": "inactive hydroxysteroid dehydrogenase-like protein 1", "tax_id": 7955, "disease": "", "pathway": " (dre:494064)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "19026618;23594743", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC086821.1, CT610939.2 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA4476735, SAMEA4476803 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC086821.1., [RefSeq]; Characterized the subcellular localization as well as the tissue distribution and performed a screen for putative substrates of HSDL1 enzymes, [RefSeq, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q5PR56", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005739 mitochondrion", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "A5WWC6-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A5WWG4-1", "uniprot_id": [ { "id": "A5WWG4_DANRE", "url": "https://www.uniprot.org/uniprot/A5WWG4", "type": "external" } ], "mass": 19455.0, "length": 164, "protein_name": "Serine/arginine-rich splicing factor 3", "gene_name": "srsf3b", "organism": "Zebrafish", "refseq_name": "serine/arginine-rich splicing factor 3b", "refseq_ac": [ { "id": "NP_001296401", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001296401", "type": "external" } ], "gene_names_uniprotkb": "srsf3b; sfrs3b; sfrs3; wu:fb44e08", "gene_names_refseq": "sfrs3b; sfrs3; srsf3b; wu:fb44e08", "protein_names_uniprotkb": "Serine/arginine-rich splicing factor 3; Splicing factor, arginine/serine-rich 3", "protein_names_refseq": "serine/arginine-rich splicing factor 3b; splicing factor, arginine/serine-rich 3b; splicing factor, arginine/serine-rich 3", "tax_id": 7955, "disease": "ovary epithelial cancer (Disease Ontology:DOID:2152); bipolar disorder (Disease Ontology:DOID:3312)", "pathway": " (dre:100145909)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "22567096;25601102;25630924;26147004;26469318;27189481;28148780;28934490", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: EH591640.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505372 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from EH591640.1, EH453768.1, EH457536.1, EH566262.1 and EH562877.1. Transcript Variant: This variant (2) differs in the 5' UTR compared to variant 1 Variants 1, 2, and 3 encode the same protein. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications., [RefSeq]; Splicing factor, which binds the consensus motif 5'-C[ACU][AU]C[ACU][AC]C-3' within pre-mRNA and promotes specific exons inclusion during alternative splicing. Interaction with YTHDC1, a RNA-binding protein that recognizes and binds N6-methyladenosine (m6A)-containing RNAs, promotes recruitment of SRSF3 to its mRNA-binding elements adjacent to m6A sites within exons. Also functions as an adapter involved in mRNA nuclear export. Binds mRNA which is thought to be transferred to the NXF1-NXT1 heterodimer for export (TAP/NXF1 pathway); enhances NXF1-NXT1 RNA-binding activity. Involved in nuclear export of m6A-containing mRNAs via interaction with YTHDC1: interaction with YTHDC1 facilitates m6A-containing mRNA-binding to both SRSF3 and NXF1, promoting mRNA nuclear export., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 2, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1PJ78", "ec_number_list": [], "go_molecular_function": "GO:0003723 RNA binding", "go_cellular_component": "GO:0005737 cytoplasm;GO:0016607 nuclear speck", "go_biological_process": "GO:0006397 mRNA processing;GO:0008380 RNA splicing;GO:0051028 mRNA transport", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "A5WWG4-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A5WWI5-1", "uniprot_id": [ { "id": "A5WWI5_DANRE", "url": "https://www.uniprot.org/uniprot/A5WWI5", "type": "external" } ], "mass": 42441.0, "length": 386, "protein_name": "Alpha-2-HS-glycoprotein 2", "gene_name": "ahsg2", "organism": "Zebrafish", "refseq_name": "alpha-2-HS-glycoprotein 2", "refseq_ac": [ { "id": "NP_001093499", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001093499", "type": "external" } ], "gene_names_uniprotkb": "ahsg2; fb60d10; si:ch73-252g14.4; si:cu104710.4; wu:fb60d10", "gene_names_refseq": "ahsg2; fb60d10; si:ch73-252g14.4; si:cu104710.4; wu:fb60d10", "protein_names_uniprotkb": "Alpha-2-HS-glycoprotein 2", "protein_names_refseq": "alpha-2-HS-glycoprotein 2", "tax_id": 7955, "disease": "", "pathway": " (dre:567406); (R-DRE-114608); (R-DRE-381426); (R-DRE-6798695); (R-DRE-8957275)", "pathway_count": 5, "publication_count": 8, "publication_id_list": "19200601;24608635;26469318;27189481;28252024;28780062;38944835;39036955", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC150351.1, GFIL01036516.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000002.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NDP2", "ec_number_list": [], "go_molecular_function": "GO:0004866 endopeptidase inhibitor activity;GO:0004869 cysteine-type endopeptidase inhibitor activity", "go_cellular_component": "GO:0005576 extracellular region;GO:0005615 extracellular space;GO:0031012 extracellular matrix", "go_biological_process": "GO:0006953 acute-phase response;GO:0050727 regulation of inflammatory response;GO:0030502 negative regulation of bone mineralization", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "A5WWI5-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A5X7A0-1", "uniprot_id": [ { "id": "SOBPA_DANRE", "url": "https://www.uniprot.org/uniprot/A5X7A0", "type": "external" } ], "mass": 99903.0, "length": 936, "protein_name": "Sine oculis-binding protein homolog A", "gene_name": "sobpa", "organism": "Zebrafish", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "sobpa; jxc1a", "gene_names_refseq": "", "protein_names_uniprotkb": "Sine oculis-binding protein homolog A; Jackson circler protein 1A", "protein_names_refseq": "", "tax_id": 7955, "disease": "", "pathway": " (dre:573683)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "Implicated in development of the cochlea., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0008270 zinc ion binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0048513 animal organ development", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A5X7A0-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A6P6V4-1", "uniprot_id": [ { "id": "A6P6V4_DANRE", "url": "https://www.uniprot.org/uniprot/A6P6V4", "type": "external" } ], "mass": 39256.0, "length": 342, "protein_name": "Taste receptor type 2", "gene_name": "tas2r3", "organism": "Zebrafish", "refseq_name": "taste receptor type 2 member 3", "refseq_ac": [ { "id": "NP_001098605", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001098605", "type": "external" } ], "gene_names_uniprotkb": "tas2r3; T2R6; zfT2R3", "gene_names_refseq": "T2R6; tas2r3; zfT2R3", "protein_names_uniprotkb": "Taste receptor type 2", "protein_names_refseq": "taste receptor type 2 member 3", "tax_id": 7955, "disease": "", "pathway": " (dre:795861)", "pathway_count": 1, "publication_count": 3, "publication_id_list": "21452212;33355666;36791723", "class_list": "", "function": "PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AB290686.1. On Sep 20, 2007 this sequence version replaced XP_001336129.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0004930 G protein-coupled receptor activity;GO:0033038 bitter taste receptor activity", "go_cellular_component": "GO:0016020 membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "A6P6V4-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A7E2M3-1", "uniprot_id": [ { "id": "EMC10_DANRE", "url": "https://www.uniprot.org/uniprot/A7E2M3", "type": "external" } ], "mass": 28244.0, "length": 257, "protein_name": "ER membrane protein complex subunit 10", "gene_name": "emc10", "organism": "Zebrafish", "refseq_name": "ER membrane protein complex subunit 10 isoform 1 precursor", "refseq_ac": [ { "id": "NP_001095859", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001095859", "type": "external" } ], "gene_names_uniprotkb": "emc10; fa97d10; wu:fa97d10; zgc:171980", "gene_names_refseq": "emc10; fa97d10; wu:fa97d10; zgc:171980", "protein_names_uniprotkb": "ER membrane protein complex subunit 10", "protein_names_refseq": "ER membrane protein complex subunit 10 isoform 1 precursor; UPF0510 protein INM02", "tax_id": 7955, "disease": "", "pathway": " (dre:565829)", "pathway_count": 1, "publication_count": 3, "publication_id_list": "26469318;28252024;34315984", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC150420.1, EH548311.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505374 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from EH586841.1, BC150420.1 and EH531631.1. On Aug 7, 2009 this sequence version replaced NP_001095859.1. Transcript Variant: This variant (1) represents the shorter transcript and encodes the longer isoform (1)., [RefSeq]; Part of the endoplasmic reticulum membrane protein complex (EMC) that enables the energy-independent insertion into endoplasmic reticulum membranes of newly synthesized membrane proteins. Preferentially accommodates proteins with transmembrane domains that are weakly hydrophobic or contain destabilizing features such as charged and aromatic residues. Involved in the cotranslational insertion of multi-pass membrane proteins in which stop-transfer membrane-anchor sequences become ER membrane spanning helices. It is also required for the post-translational insertion of tail-anchored/TA proteins in endoplasmic reticulum membranes. By mediating the proper cotranslational insertion of N-terminal transmembrane domains in an N-exo topology, with translocated N-terminus in the lumen of the ER, controls the topology of multi-pass membrane proteins like the G protein-coupled receptors. By regulating the insertion of various proteins in membranes, it is indirectly involved in many cellular processes. Promotes angiogenesis and tissue repair in the heart after myocardial infarction. Stimulates cardiac endothelial cell migration and outgrowth via the activation of p38 MAPK, PAK and MAPK2 signaling pathways., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0072546 EMC complex;GO:0016020 membrane;GO:0005789 endoplasmic reticulum membrane", "go_biological_process": "GO:0071816 tail-anchored membrane protein insertion into ER membrane;GO:0045050 protein insertion into ER membrane by stop-transfer membrane-anchor sequence", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "A7E2M3-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A7E2V1-1", "uniprot_id": [ { "id": "CEP76_DANRE", "url": "https://www.uniprot.org/uniprot/A7E2V1", "type": "external" } ], "mass": 74378.0, "length": 662, "protein_name": "Centrosomal protein of 76 kDa", "gene_name": "cep76", "organism": "Zebrafish", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "cep76; zgc:162328", "gene_names_refseq": "", "protein_names_uniprotkb": "Centrosomal protein of 76 kDa; Cep76", "protein_names_refseq": "", "tax_id": 7955, "disease": "", "pathway": " (dre:564926); (R-DRE-380320)", "pathway_count": 2, "publication_count": 4, "publication_id_list": "18950740;26469318;27189481;27903883", "class_list": "", "function": "Centrosomal protein involved in regulation of centriole duplication. Required to limit centriole duplication to once per cell cycle by preventing centriole reduplication., [UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005813 centrosome;GO:0005814 centriole", "go_biological_process": "GO:0046599 regulation of centriole replication", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "A7E2V1-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A7MCB7-1", "uniprot_id": [ { "id": "TMA16_DANRE", "url": "https://www.uniprot.org/uniprot/A7MCB7", "type": "external" } ], "mass": 22547.0, "length": 194, "protein_name": "Translation machinery-associated protein 16", "gene_name": "tma16", "organism": "Zebrafish", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "tma16; zgc:110664", "gene_names_refseq": "", "protein_names_uniprotkb": "Translation machinery-associated protein 16", "protein_names_refseq": "", "tax_id": 7955, "disease": "", "pathway": " (dre:553647)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "27189481", "class_list": "", "function": "Involved in the biogenesis of the 60S ribosomal subunit in the nucleus., [UniProtKB, UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q503E8", "ec_number_list": [], "go_molecular_function": "GO:1990275 preribosome binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0042273 ribosomal large subunit biogenesis", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "A7MCB7-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A7MCS3-1", "uniprot_id": [ { "id": "CP089_DANRE", "url": "https://www.uniprot.org/uniprot/A7MCS3", "type": "external" } ], "mass": 39925.0, "length": 351, "protein_name": "UPF0764 protein C16orf89 homolog", "gene_name": "", "organism": "Zebrafish", "refseq_name": "UPF0764 protein C16orf89 homolog precursor", "refseq_ac": [ { "id": "NP_001333209", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001333209", "type": "external" } ], "gene_names_uniprotkb": "", "gene_names_refseq": "si:ch211-76l23.7", "protein_names_uniprotkb": "UPF0764 protein C16orf89 homolog", "protein_names_refseq": "UPF0764 protein C16orf89 homolog precursor; uPF0764 protein C16orf89 homolog", "tax_id": 7955, "disease": "", "pathway": " (dre:566173)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "23594743", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC152290.1, GFIL01036416.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN01765705 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000003.1. On Oct 4, 2016 this sequence version replaced XP_694540.3. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005576 extracellular region;GO:0005829 cytosol;GO:0016020 membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "A7MCS3-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A7UD89-1", "uniprot_id": [ { "id": "A7UD89_DANRE", "url": "https://www.uniprot.org/uniprot/A7UD89", "type": "external" } ], "mass": 42955.0, "length": 380, "protein_name": "Neuropeptide Y receptor type 1", "gene_name": "npy1r", "organism": "Zebrafish", "refseq_name": "neuropeptide Y receptor type 1", "refseq_ac": [ { "id": "NP_001095861", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001095861", "type": "external" } ], "gene_names_uniprotkb": "npy1r; si:dkey-253i9.3", "gene_names_refseq": "npy1r; si:dkey-253i9.3", "protein_names_uniprotkb": "Neuropeptide Y receptor type 1", "protein_names_refseq": "neuropeptide Y receptor type 1", "tax_id": 7955, "disease": "nicotine dependence (Disease Ontology:DOID:0050742); peripheral artery disease (Disease Ontology:DOID:0050830); stroke (Disease Ontology:DOID:0051061); absence epilepsy (Disease Ontology:DOID:0070309); hypertension (Disease Ontology:DOID:10763); alcohol use disorder (Disease Ontology:DOID:1574); depressive disorder (Disease Ontology:DOID:1596); anxiety disorder (Disease Ontology:DOID:2030); opiate dependence (Disease Ontology:DOID:2559); temporal lobe epilepsy (Disease Ontology:DOID:3328); amphetamine abuse (Disease Ontology:DOID:670); cocaine abuse (Disease Ontology:DOID:809); obesity (Disease Ontology:DOID:9970); heroin dependence (Disease Ontology:DOID:9976)", "pathway": " (dre:793668); (R-DRE-375276); (R-DRE-418594)", "pathway_count": 3, "publication_count": 9, "publication_id_list": "18191918;18977429;23483106;25995451;27130971;29225025;34359098;34363807;36948132", "class_list": "", "function": "##Evidence-Data-START## RNAseq introns :: single sample supports all introns SAMEA3505379, SAMEA4476731 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from EU046342.1. On Aug 22, 2007 this sequence version replaced XP_001333476.1. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 14, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0008188 neuropeptide receptor activity;GO:0004983 neuropeptide Y receptor activity", "go_cellular_component": "GO:0005886 plasma membrane;GO:0043005 neuron projection", "go_biological_process": "GO:0007218 neuropeptide signaling pathway", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "A7UD89-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A7XYJ6-1", "uniprot_id": [ { "id": "SOBPB_DANRE", "url": "https://www.uniprot.org/uniprot/A7XYJ6", "type": "external" } ], "mass": 74685.0, "length": 668, "protein_name": "Sine oculis-binding protein homolog B", "gene_name": "sobpb", "organism": "Zebrafish", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "sobpb; jxc1b; si:ch211-152c2.4", "gene_names_refseq": "", "protein_names_uniprotkb": "Sine oculis-binding protein homolog B; Jackson circler protein 1B", "protein_names_refseq": "", "tax_id": 7955, "disease": "", "pathway": " (dre:100006088)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "23594743", "class_list": "", "function": "Implicated in development of the cochlea., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q5RGY3", "ec_number_list": [], "go_molecular_function": "GO:0008270 zinc ion binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0048513 animal organ development", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "A7XYJ6-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A7YDW0-1", "uniprot_id": [ { "id": "RUN3A_DANRE", "url": "https://www.uniprot.org/uniprot/A7YDW0", "type": "external" } ], "mass": 48476.0, "length": 428, "protein_name": "RUN domain-containing protein 3A", "gene_name": "rundc3a", "organism": "Zebrafish", "refseq_name": "RUN domain-containing protein 3A", "refseq_ac": [ { "id": "NP_956443", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_956443", "type": "external" } ], "gene_names_uniprotkb": "rundc3a; rap2ip1; rap2ip", "gene_names_refseq": "rap2ip1; rap2ip; rundc3ab; rundc3a; zgc:55828; zgc:55922", "protein_names_uniprotkb": "RUN domain-containing protein 3A; Rap2-interacting protein; Rap2ip", "protein_names_refseq": "RUN domain-containing protein 3A; Rap2 interacting protein; rap2-interacting protein", "tax_id": 7955, "disease": "", "pathway": " (dre:393118)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC044540.1, SRR26395017.419863.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505372 [ECO:0000348] ##Evidence-Data-END## ##RefSeq-Attributes-START## CDS uses downstream in-frame AUG :: lack of evidence for use of upstream AUG ##RefSeq-Attributes-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000012.1. On Jun 25, 2025 this sequence version replaced NP_956443.2., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q7ZT23", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A7YDW0-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A7YY97-1", "uniprot_id": [ { "id": "CD37L_DANRE", "url": "https://www.uniprot.org/uniprot/A7YY97", "type": "external" } ], "mass": 36371.0, "length": 313, "protein_name": "Hsp90 co-chaperone Cdc37-like 1", "gene_name": "cdc37l1", "organism": "Zebrafish", "refseq_name": "hsp90 co-chaperone Cdc37-like 1", "refseq_ac": [ { "id": "NP_001103296", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001103296", "type": "external" } ], "gene_names_uniprotkb": "cdc37l1; zgc:171475", "gene_names_refseq": "cdc37l1; im:7139934; wu:fa92d07; wu:fk28f10; zgc:171475", "protein_names_uniprotkb": "Hsp90 co-chaperone Cdc37-like 1", "protein_names_refseq": "CDC37 cell division cycle 37 homolog-like 1; hsp90 co-chaperone Cdc37-like 1", "tax_id": 7955, "disease": "", "pathway": " (dre:569357); (R-DRE-114608)", "pathway_count": 2, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC152570.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505389, SAMEA4476729 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from BC152570.1. On Oct 7, 2011 this sequence version replaced NP_001103296.1., [RefSeq]; Co-chaperone that binds to numerous proteins and promotes their interaction with Hsp70 and Hsp90., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0051082 unfolded protein binding;GO:0051087 protein-folding chaperone binding;GO:0031072 heat shock protein binding", "go_cellular_component": "GO:0005737 cytoplasm", "go_biological_process": "GO:0050821 protein stabilization;GO:0006457 protein folding", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A7YY97-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A8DZA0-1", "uniprot_id": [ { "id": "A8DZA0_DANRE", "url": "https://www.uniprot.org/uniprot/A8DZA0", "type": "external" } ], "mass": 96993.0, "length": 830, "protein_name": "RNA-binding protein 25b isoform X1", "gene_name": "rbm25b", "organism": "Zebrafish", "refseq_name": "RNA-binding protein 25b isoform X1", "refseq_ac": [ { "id": "XP_009293281", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009293281", "type": "external" } ], "gene_names_uniprotkb": "rbm25b; fi03e10; rbm25; si:ch211-105d18.5; wu:fi03e10; zgc:56208", "gene_names_refseq": "fi03e10; rbm25b; rbm25; si:ch211-105d18.5; wu:fi03e10; zgc:56208", "protein_names_uniprotkb": "RNA-binding protein 25b isoform X1", "protein_names_refseq": "RNA-binding protein 25b isoform X1", "tax_id": 7955, "disease": "", "pathway": " (R-DRE-9770562)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133195) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M3ALT9", "ec_number_list": [], "go_molecular_function": "GO:0003729 mRNA binding", "go_cellular_component": "", "go_biological_process": "GO:0006397 mRNA processing;GO:0000381 regulation of alternative mRNA splicing, via spliceosome", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A8DZA0-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A8DZG6-1", "uniprot_id": [ { "id": "A8DZG6_DANRE", "url": "https://www.uniprot.org/uniprot/A8DZG6", "type": "external" } ], "mass": 62933.0, "length": 542, "protein_name": "Uncharacterized protein LOC567583; Uncharacterized protein isoform X1", "gene_name": "si:ch211-241e1.5", "organism": "Zebrafish", "refseq_name": "uncharacterized protein LOC567583", "refseq_ac": [ { "id": "NP_001119897", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001119897", "type": "external" } ], "gene_names_uniprotkb": "si:ch211-241e1.5; fi43c02; wu:fi43c02", "gene_names_refseq": "fi43c02; si:ch211-241e1.5; wu:fi43c02", "protein_names_uniprotkb": "Uncharacterized protein LOC567583; Uncharacterized protein isoform X1", "protein_names_refseq": "uncharacterized protein LOC567583", "tax_id": 7955, "disease": "", "pathway": " (dre:567583)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "26469318", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: ERR4321680.675871.1, SRR32588717.23114659.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505372 [ECO:0000348] ##Evidence-Data-END## PREDICTED REFSEQ: This record has not been reviewed and the function is unknown. The reference sequence was derived from JBMGRA010000002.1. On Jul 31, 2008 this sequence version replaced XP_695974.3., [RefSeq]; May be involved in transcriptional regulation., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NHF0;A0AC58H257;A0AC58H278", "ec_number_list": [], "go_molecular_function": "GO:0008270 zinc ion binding;GO:0042802 identical protein binding;GO:0000977 RNA polymerase II transcription regulatory region sequence-specific DNA binding;GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006357 regulation of transcription by RNA polymerase II;GO:0032502 developmental process", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "A8DZG6-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A8DZH1-1", "uniprot_id": [ { "id": "A8DZH1_DANRE", "url": "https://www.uniprot.org/uniprot/A8DZH1", "type": "external" } ], "mass": 9860.0, "length": 89, "protein_name": "FXYD domain-containing ion transport regulator", "gene_name": "fxyd3", "organism": "Zebrafish", "refseq_name": "phospholemman precursor", "refseq_ac": [ { "id": "NP_001243141", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001243141", "type": "external" } ], "gene_names_uniprotkb": "fxyd3; fxyd1; fxyd9; im:6894873; si:dkey-33i11.5", "gene_names_refseq": "fxyd1; fxyd3; fxyd9; im:6894873; si:dkey-33i11.5", "protein_names_uniprotkb": "FXYD domain-containing ion transport regulator", "protein_names_refseq": "FXYD domain containing ion transport regulator 1 (phospholemman); phospholemman precursor", "tax_id": 7955, "disease": "congestive heart failure (Disease Ontology:DOID:6000)", "pathway": " (R-DRE-5578775); (R-DRE-936837)", "pathway_count": 2, "publication_count": 7, "publication_id_list": "16631158;17371995;21423371;22683378;27189481;31113326;37548652", "class_list": "", "function": "Data indicate that Atp1a1 and Fxyd1 co-regulate brain ventricle development., [RefSeq, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NYZ3;A0AC58HGF2", "ec_number_list": [], "go_molecular_function": "GO:0017080 sodium channel regulator activity", "go_cellular_component": "GO:0016020 membrane", "go_biological_process": "GO:0006811 monoatomic ion transport;GO:1903278 positive regulation of sodium ion export across plasma membrane", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "A8DZH1-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A8E5C5-1", "uniprot_id": [ { "id": "DS7CA_DANRE", "url": "https://www.uniprot.org/uniprot/A8E5C5", "type": "external" } ], "mass": 35182.0, "length": 324, "protein_name": "Dehydrogenase/reductase SDR family member 7C-A", "gene_name": "dhrs7ca", "organism": "Zebrafish", "refseq_name": "dehydrogenase/reductase (SDR family) member 7Cb", "refseq_ac": [ { "id": "NP_001018493", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001018493", "type": "external" } ], "gene_names_uniprotkb": "dhrs7ca; zgc:112176", "gene_names_refseq": "dhrs7cb; dhrs7c; zgc:112176", "protein_names_uniprotkb": "Dehydrogenase/reductase SDR family member 7C-A; 1.1.-.-", "protein_names_refseq": "dehydrogenase/reductase (SDR family) member 7Cb; dehydrogenase/reductase (SDR family) member 7C", "tax_id": 7955, "disease": "", "pathway": " (dre:553684)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC095682.1, BC153545.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC095682.1., [RefSeq]; Putative oxidoreductase., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q502I7", "ec_number_list": [], "go_molecular_function": "GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor", "go_cellular_component": "GO:0005576 extracellular region", "go_biological_process": "GO:0006874 intracellular calcium ion homeostasis", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A8E5C5-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A8E6E3-1", "uniprot_id": [ { "id": "A8E6E3_DANRE", "url": "https://www.uniprot.org/uniprot/A8E6E3", "type": "external" } ], "mass": 21176.0, "length": 181, "protein_name": "Interferon phi 3 precursor", "gene_name": "ifnphi3", "organism": "Zebrafish", "refseq_name": "interferon phi 3 precursor", "refseq_ac": [ { "id": "NP_001104553", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001104553", "type": "external" } ], "gene_names_uniprotkb": "ifnphi3; ifn3", "gene_names_refseq": "ifn3; ifnphi3", "protein_names_uniprotkb": "Interferon phi 3 precursor", "protein_names_refseq": "interferon phi 3 precursor; type I interferon 3", "tax_id": 7955, "disease": "metabolic dysfunction-associated steatotic liver disease (Disease Ontology:DOID:0080208); COVID-19 (Disease Ontology:DOID:0080600); common cold (Disease Ontology:DOID:10459); anogenital venereal wart (Disease Ontology:DOID:11168); sarcoidosis (Disease Ontology:DOID:11335); Crimean-Congo hemorrhagic fever (Disease Ontology:DOID:12287); hepatitis C (Disease Ontology:DOID:1883); hepatitis B (Disease Ontology:DOID:2043); transient cerebral ischemia (Disease Ontology:DOID:224); multiple sclerosis (Disease Ontology:DOID:2377); cerebral infarction (Disease Ontology:DOID:3526); melioidosis (Disease Ontology:DOID:5052); liver cirrhosis (Disease Ontology:DOID:5082); proteinuria (Disease Ontology:DOID:576); hepatocellular carcinoma (Disease Ontology:DOID:684); retinoblastoma (Disease Ontology:DOID:768); osteoarthritis (Disease Ontology:DOID:8398)", "pathway": " (dre:100126803); (R-DRE-909733); (R-DRE-912694)", "pathway_count": 3, "publication_count": 10, "publication_id_list": "17785823;18039395;18802111;19265122;19717522;36902023;38173722;38526188;38766355;39558430", "class_list": "", "function": "##Evidence-Data-START## RNAseq introns :: single sample supports all introns SAMN18715719, SAMN18715720 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BN001103.1. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 17, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NEU0;F1QRE7", "ec_number_list": [], "go_molecular_function": "GO:0005125 cytokine activity;GO:0005126 cytokine receptor binding", "go_cellular_component": "GO:0005615 extracellular space", "go_biological_process": "GO:0002312 B cell activation involved in immune response;GO:0051607 defense response to virus;GO:0060337 type I interferon-mediated signaling pathway;GO:0009615 response to virus;GO:0002250 adaptive immune response", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "A8E6E3-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A8E7A9-1", "uniprot_id": [ { "id": "A8E7A9_DANRE", "url": "https://www.uniprot.org/uniprot/A8E7A9", "type": "external" } ], "mass": 27151.0, "length": 250, "protein_name": "Krueppel-like factor 14", "gene_name": "klf16", "organism": "Zebrafish", "refseq_name": "uncharacterized protein LOC768186", "refseq_ac": [ { "id": "NP_001070797", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001070797", "type": "external" } ], "gene_names_uniprotkb": "klf16; klf14; wu:fc41a09; wu:fi22b08; zgc:152867; zgc:153115", "gene_names_refseq": "klf14; klf16; wu:fc41a09; wu:fi22b08; zgc:152867; zgc:153115", "protein_names_uniprotkb": "Krueppel-like factor 14", "protein_names_refseq": "uncharacterized protein LOC768186", "tax_id": 7955, "disease": "", "pathway": " (dre:768186)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "26015096;26469318;26963759;30407522;38892048", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC125827.1, SRR26395062.1719547.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA4476749 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000002.1. On Apr 5, 2014 this sequence version replaced NP_001070797.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NBK3", "ec_number_list": [], "go_molecular_function": "GO:0008270 zinc ion binding;GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding;GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006357 regulation of transcription by RNA polymerase II;GO:0031018 endocrine pancreas development", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "A8E7A9-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A8E7F8-1", "uniprot_id": [ { "id": "A8E7F8_DANRE", "url": "https://www.uniprot.org/uniprot/A8E7F8", "type": "external" } ], "mass": 14673.0, "length": 131, "protein_name": "C-type natriuretic peptide precursor", "gene_name": "nppc", "organism": "Zebrafish", "refseq_name": "C-type natriuretic peptide precursor", "refseq_ac": [ { "id": "NP_001103410", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001103410", "type": "external" } ], "gene_names_uniprotkb": "nppc; cnp4; si:ch211-126j24.3", "gene_names_refseq": "cnp4; nppc; si:ch211-126j24.3", "protein_names_uniprotkb": "C-type natriuretic peptide precursor", "protein_names_refseq": "C-type natriuretic peptide precursor; C-type natriuretic peptide-like", "tax_id": 7955, "disease": "hypertension (Disease Ontology:DOID:10763); toxic shock syndrome (Disease Ontology:DOID:14115); depressive disorder (Disease Ontology:DOID:1596); osteochondrodysplasia (Disease Ontology:DOID:2256); arteriosclerosis (Disease Ontology:DOID:2349); achondroplasia (Disease Ontology:DOID:4480); end stage renal disease (Disease Ontology:DOID:783)", "pathway": " (dre:570244)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "26469318;27993976;29574150;34122528;34523214;35864193;36791723;37629102;38381829;38810550", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: EH444466.1, EH433003.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA4476781 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000022.1. On Oct 14, 2007 this sequence version replaced XP_698794.2. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 7, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NEI0", "ec_number_list": [], "go_molecular_function": "GO:0005179 hormone activity;GO:0051427 hormone receptor binding", "go_cellular_component": "GO:0005576 extracellular region", "go_biological_process": "GO:0006182 cGMP biosynthetic process;GO:0097746 blood vessel diameter maintenance;GO:0007168 receptor guanylyl cyclase signaling pathway", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "A8E7F8-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A8E7H5-1", "uniprot_id": [ { "id": "A8E7H5_DANRE", "url": "https://www.uniprot.org/uniprot/A8E7H5", "type": "external" } ], "mass": 17820.0, "length": 153, "protein_name": "Gastrin-releasing peptide", "gene_name": "grp", "organism": "Zebrafish", "refseq_name": "gastrin-releasing peptide precursor", "refseq_ac": [ { "id": "NP_001154822", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001154822", "type": "external" } ], "gene_names_uniprotkb": "grp; si:ch211-233a1.7", "gene_names_refseq": "grp; si:ch211-233a1.7", "protein_names_uniprotkb": "Gastrin-releasing peptide", "protein_names_refseq": "gastrin-releasing peptide precursor", "tax_id": 7955, "disease": "prostate cancer (Disease Ontology:DOID:10283); kidney failure (Disease Ontology:DOID:1074); lung non-small cell carcinoma (Disease Ontology:DOID:3908); lung small cell carcinoma (Disease Ontology:DOID:5409); pneumonia (Disease Ontology:DOID:552); congestive heart failure (Disease Ontology:DOID:6000); cerebrovascular disease (Disease Ontology:DOID:6713); colorectal cancer (Disease Ontology:DOID:9256)", "pathway": " (dre:559978); (R-DRE-375276); (R-DRE-381771); (R-DRE-416476)", "pathway_count": 4, "publication_count": 4, "publication_id_list": "22565667;25990920;28648499;35189038", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GDQH01042578.1, SRR32588722.37724079.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA4476741, SAMEA4476803 [ECO:0006172] ##Evidence-Data-END## INFERRED REFSEQ: This record is predicted by genome sequence analysis and is not yet supported by experimental evidence. The reference sequence was derived from JBMGRA010000021.1. On May 30, 2009 this sequence version replaced XP_688460.2., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 8, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NSY5", "ec_number_list": [], "go_molecular_function": "GO:0005184 neuropeptide hormone activity", "go_cellular_component": "GO:0005615 extracellular space;GO:0031410 cytoplasmic vesicle", "go_biological_process": "GO:0007218 neuropeptide signaling pathway;GO:2000987 positive regulation of behavioral fear response", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "A8E7H5-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A8E7I5-1", "uniprot_id": [ { "id": "TTC36_DANRE", "url": "https://www.uniprot.org/uniprot/A8E7I5", "type": "external" } ], "mass": 20306.0, "length": 187, "protein_name": "Tetratricopeptide repeat protein 36", "gene_name": "ttc36", "organism": "Zebrafish", "refseq_name": "tetratricopeptide repeat protein 36", "refseq_ac": [ { "id": "NP_001007389", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001007389", "type": "external" } ], "gene_names_uniprotkb": "ttc36; si:rp71-52f21.2; zgc:103600", "gene_names_refseq": "ttc36; zgc:103600", "protein_names_uniprotkb": "Tetratricopeptide repeat protein 36; TPR repeat protein 36", "protein_names_refseq": "TPR repeat protein 36; tetratricopeptide repeat protein 36", "tax_id": 7955, "disease": "", "pathway": " (dre:492516)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "23594743", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC085563.1, CN170758.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505374, SAMEA3505379 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC085563.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q5U3F6", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "GO:0032474 otolith morphogenesis;GO:0060271 cilium assembly;GO:0061371 determination of heart left/right asymmetry;GO:0006570 tyrosine metabolic process", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "A8E7I5-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A8E7K1-1", "uniprot_id": [ { "id": "A8E7K1_DANRE", "url": "https://www.uniprot.org/uniprot/A8E7K1", "type": "external" } ], "mass": 101889.0, "length": 929, "protein_name": "Vomeronasal type-2 receptor 1", "gene_name": "vmn2r1", "organism": "Zebrafish", "refseq_name": "vomeronasal type-2 receptor 1", "refseq_ac": [ { "id": "XP_009292045", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009292045", "type": "external" } ], "gene_names_uniprotkb": "vmn2r1", "gene_names_refseq": "vmn2r1", "protein_names_uniprotkb": "Vomeronasal type-2 receptor 1", "protein_names_refseq": "vomeronasal type-2 receptor 1", "tax_id": 7955, "disease": "", "pathway": " (dre:566039)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133193) annotated using gene prediction method: Gnomon, supported by mRNA evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M3AV12", "ec_number_list": [], "go_molecular_function": "GO:0004930 G protein-coupled receptor activity;GO:0004984 olfactory receptor activity;GO:0038023 signaling receptor activity", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A8E7K1-1", "record_type": "protein", "filter_code": "0000000.0000001.010000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A8E7L5-1", "uniprot_id": [ { "id": "A8E7L5_DANRE", "url": "https://www.uniprot.org/uniprot/A8E7L5", "type": "external" } ], "mass": 44941.0, "length": 399, "protein_name": "Thyrotropin-releasing hormone receptor", "gene_name": "trhrb", "organism": "Zebrafish", "refseq_name": "thyrotropin-releasing hormone receptor b", "refseq_ac": [ { "id": "NP_001108160", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001108160", "type": "external" } ], "gene_names_uniprotkb": "trhrb; si:ch211-122p23.1", "gene_names_refseq": "si:ch211-122p23.1; trhrb", "protein_names_uniprotkb": "Thyrotropin-releasing hormone receptor; Thyroliberin receptor", "protein_names_refseq": "thyrotropin-releasing hormone receptor 1; thyrotropin-releasing hormone receptor b; trhr1; trhr", "tax_id": 7955, "disease": "congenital hypothyroidism (Disease Ontology:DOID:0050328); congenital nongoitrous hypothyroidism 7 (Disease Ontology:DOID:0111836); hypertension (Disease Ontology:DOID:10763)", "pathway": " (dre:569382)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "21158436;23110413;24034824;26547027;26865342;31952464;33011634;33027873;33297144;35681818", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: SRR32588721.3560821.1, SRR32588722.23157782.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505380, SAMEA3505390 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000019.1. On Feb 21, 2008 this sequence version replaced XP_697856.1. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications., [RefSeq]; Receptor for thyrotropin-releasing hormone (TRH). Upon ligand binding, this G-protein-coupled receptor triggers activation of the phosphatidylinositol (IP3)-calcium-protein kinase C (PKC) pathway., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 3, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8N7UYR9", "ec_number_list": [], "go_molecular_function": "GO:0004997 thyrotropin-releasing hormone receptor activity", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "GO:0007200 phospholipase C-activating G protein-coupled receptor signaling pathway", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "A8E7L5-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A8E7N5-1", "uniprot_id": [ { "id": "A8E7N5_DANRE", "url": "https://www.uniprot.org/uniprot/A8E7N5", "type": "external" } ], "mass": 64899.0, "length": 568, "protein_name": "Vacuolar protein sorting-associated protein 45", "gene_name": "vps45", "organism": "Zebrafish", "refseq_name": "vacuolar protein sorting-associated protein 45", "refseq_ac": [ { "id": "NP_001243585", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001243585", "type": "external" } ], "gene_names_uniprotkb": "vps45; si:dkey-200h23.3", "gene_names_refseq": "si:dkey-200h23.3; vps45", "protein_names_uniprotkb": "Vacuolar protein sorting-associated protein 45", "protein_names_refseq": "vacuolar protein sorting-associated protein 45", "tax_id": 7955, "disease": "severe congenital neutropenia 5 (Disease Ontology:DOID:0112132)", "pathway": " (dre:561653); (R-DRE-6811438)", "pathway_count": 2, "publication_count": 6, "publication_id_list": "23738510;26469318;27189481;28252024;30322969;33159854", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GDQH01002957.1, GDQQ01005396.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000019.1. On Feb 16, 2012 this sequence version replaced XP_707890.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]; May play a role in vesicle-mediated protein trafficking from the Golgi stack through the trans-Golgi network., [UniProtKB, UniProtKB]; VPS45 normally suppresses lens fiber differentiation in the anterior region of lens epithelium by modulating TGFbeta and canonical Wnt signaling pathways.[Vps45] Publication Status: Online-Only, [RefSeq, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NZK8", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0000139 Golgi membrane;GO:0010008 endosome membrane", "go_biological_process": "GO:0006886 intracellular protein transport;GO:0016192 vesicle-mediated transport;GO:1902746 regulation of lens fiber cell differentiation", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "A8E7N5-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A8E7Q2-1", "uniprot_id": [ { "id": "A8E7Q2_DANRE", "url": "https://www.uniprot.org/uniprot/A8E7Q2", "type": "external" } ], "mass": 54391.0, "length": 474, "protein_name": "Zona pellucida sperm-binding protein 3", "gene_name": "zp3d.2", "organism": "Zebrafish", "refseq_name": "zona pellucida sperm-binding protein 3d.2 precursor", "refseq_ac": [ { "id": "NP_001156319", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001156319", "type": "external" } ], "gene_names_uniprotkb": "zp3d.2; fd14g06; si:ch211-225p5.3; wu:fd14g06; zpc4a-2", "gene_names_refseq": "fd14g06; si:ch211-225p5.3; wu:fd14g06; zp3d.2; zpc4a-2", "protein_names_uniprotkb": "Zona pellucida sperm-binding protein 3; Zona pellucida glycoprotein 3", "protein_names_refseq": "zona pellucida sperm-binding protein 3d.2 precursor; zp3v2", "tax_id": 7955, "disease": "", "pathway": " (dre:555835)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "16481590;18629171;24613356;26765566;27189481;29307115", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GFIL01036009.1, SRR32588719.14538166.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN08196788, SAMN18715719 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000016.1. On Jun 28, 2009 this sequence version replaced XP_683571.3., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NUY0", "ec_number_list": [], "go_molecular_function": "GO:0035804 structural constituent of egg coat;GO:0032190 acrosin binding", "go_cellular_component": "GO:0005615 extracellular space;GO:0005886 plasma membrane;GO:0035805 egg coat", "go_biological_process": "GO:2000344 positive regulation of acrosome reaction;GO:0035803 egg coat formation;GO:0007339 binding of sperm to zona pellucida", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "A8E7Q2-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A8E7S2-1", "uniprot_id": [ { "id": "A8E7S2_DANRE", "url": "https://www.uniprot.org/uniprot/A8E7S2", "type": "external" } ], "mass": 26449.0, "length": 237, "protein_name": "Proenkephalin a precursor", "gene_name": "penka", "organism": "Zebrafish", "refseq_name": "proenkephalin a precursor", "refseq_ac": [ { "id": "NP_956377", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_956377", "type": "external" } ], "gene_names_uniprotkb": "penka; penkl; zgc:73353", "gene_names_refseq": "penka; penkl; zgc:73353", "protein_names_uniprotkb": "Proenkephalin a precursor", "protein_names_refseq": "PENKb; proenkephalin a precursor", "tax_id": 7955, "disease": "overactive bladder syndrome (Disease Ontology:DOID:0070355)", "pathway": " (dre:368228); (R-DRE-375276); (R-DRE-381426); (R-DRE-418594); (R-DRE-8957275)", "pathway_count": 5, "publication_count": 10, "publication_id_list": "18985751;19949253;20463905;21241776;23348513;35286299;36768918;37240050;37683694;37935684", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC059668.1, EH439307.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505373, SAMEA3505384 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from EH439307.1 and EH477622.1. On Mar 18, 2015 this sequence version replaced NP_956377.1. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications., [RefSeq]; Proenkephalin-A secreted by renal proximal tubules functions as a brake in kidney regeneration. Publication Status: Online-Only, [RefSeq, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1PCF5", "ec_number_list": [], "go_molecular_function": "GO:0031628 opioid receptor binding;GO:0001515 opioid peptide activity", "go_cellular_component": "GO:0005576 extracellular region;GO:0005886 plasma membrane;GO:0030425 dendrite;GO:0043025 neuronal cell body;GO:0043679 axon terminus", "go_biological_process": "GO:0007218 neuropeptide signaling pathway;GO:0007268 chemical synaptic transmission;GO:0007600 sensory perception", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "A8E7S2-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A8E7T8-1", "uniprot_id": [ { "id": "A8E7T8_DANRE", "url": "https://www.uniprot.org/uniprot/A8E7T8", "type": "external" } ], "mass": 41558.0, "length": 359, "protein_name": "B2 bradykinin receptor", "gene_name": "bdkrb1", "organism": "Zebrafish", "refseq_name": "B1 bradykinin receptor", "refseq_ac": [ { "id": "NP_898896", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_898896", "type": "external" } ], "gene_names_uniprotkb": "bdkrb1; bdkrb2", "gene_names_refseq": "bdkrb1; bdkrb2", "protein_names_uniprotkb": "B2 bradykinin receptor", "protein_names_refseq": "B1 bradykinin receptor; B1 like bradykinin receptor; bradykinin receptor B2", "tax_id": 7955, "disease": "hypertension (Disease Ontology:DOID:10763); glomerulonephritis (Disease Ontology:DOID:2921); pulmonary fibrosis (Disease Ontology:DOID:3770); rhinitis (Disease Ontology:DOID:4483); end stage renal disease (Disease Ontology:DOID:783)", "pathway": " (dre:368199)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "12049646;15644864;15891034;16530355;38270285", "class_list": "", "function": "Cloning, structural characterization and functional expression (BRADYKININ B2 RECEPTOR), [RefSeq, PubMed]; INFERRED REFSEQ: This record is predicted by genome sequence analysis and is not yet supported by experimental evidence. The reference sequence was derived from JBMGRA010000017.1. On Jun 25, 2015 this sequence version replaced NP_898896.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. There are no transcripts supporting this RefSeq in zebrafish. However, this transcript and protein are inferred based on AF497802.1 and RT-PCR data reported in the literature (PMID: 12049646)., [RefSeq]; Receptor for bradykinin. It is associated with G proteins that activate a phosphatidylinositol-calcium second messenger system., [UniProtKB, UniProtKB]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 5, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1PAU7", "ec_number_list": [], "go_molecular_function": "GO:0004947 bradykinin receptor activity", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "GO:0007186 G protein-coupled receptor signaling pathway", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "A8E7T8-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A8KB59-1", "uniprot_id": [ { "id": "DRC12_DANRE", "url": "https://www.uniprot.org/uniprot/A8KB59", "type": "external" } ], "mass": 23135.0, "length": 202, "protein_name": "Dynein regulatory complex protein 12", "gene_name": "drc12", "organism": "Zebrafish", "refseq_name": "dynein regulatory complex protein 12", "refseq_ac": [ { "id": "NP_001104680", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001104680", "type": "external" } ], "gene_names_uniprotkb": "drc12; ccdc153; zgc:171582", "gene_names_refseq": "ccdc153; drc12; zgc:171582", "protein_names_uniprotkb": "Dynein regulatory complex protein 12", "protein_names_refseq": "UPF0610 protein; coiled-coil domain containing 153; coiled-coil domain-containing protein 153; dynein regulatory complex protein 12", "tax_id": 7955, "disease": "", "pathway": " (dre:792470)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC153977.1, CO916915.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505375 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC153977.1. On Dec 9, 2007 this sequence version replaced XP_001331798.1., [RefSeq]; Component of the nexin-dynein regulatory complex (N-DRC), a key regulator of ciliary/flagellar motility which maintains the alignment and integrity of the distal axoneme and regulates microtubule sliding in motile axonemes., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A8KB59-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A8KB87-1", "uniprot_id": [ { "id": "COA3_DANRE", "url": "https://www.uniprot.org/uniprot/A8KB87", "type": "external" } ], "mass": 10788.0, "length": 96, "protein_name": "Cytochrome c oxidase assembly factor 3 homolog, mitochondrial", "gene_name": "coa3a", "organism": "Zebrafish", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "coa3a; ccdc56; coa3; im:7163732; zgc:171846", "gene_names_refseq": "", "protein_names_uniprotkb": "Cytochrome c oxidase assembly factor 3 homolog, mitochondrial; Coiled-coil domain-containing protein 56", "protein_names_refseq": "", "tax_id": 7955, "disease": "mitochondrial complex IV deficiency nuclear type 14 (Disease Ontology:DOID:0070499)", "pathway": " (dre:100141351); (R-DRE-9864848)", "pathway_count": 2, "publication_count": 4, "publication_id_list": "27189481;28252024;35993337;36835354", "class_list": "", "function": "Core component of the MITRAC (mitochondrial translation regulation assembly intermediate of cytochrome c oxidase complex) complex, that regulates cytochrome c oxidase assembly. MITRAC complexes regulate both translation of mitochondrial encoded components and assembly of nuclear-encoded components imported in mitochondrion. Required for efficient translation of MT-CO1 and mitochondrial respiratory chain complex IV assembly., [UniProtKB, UniProtKB, UniProtKB, UniProtKB]; Required for assembly of cytochrome c oxidase (complex IV)., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005743 mitochondrial inner membrane", "go_biological_process": "GO:0033617 mitochondrial respiratory chain complex IV assembly;GO:0070131 positive regulation of mitochondrial translation", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "A8KB87-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A8KBL5-1", "uniprot_id": [ { "id": "S38AB_DANRE", "url": "https://www.uniprot.org/uniprot/A8KBL5", "type": "external" } ], "mass": 48300.0, "length": 448, "protein_name": "Putative sodium-coupled neutral amino acid transporter 11", "gene_name": "slc38a11", "organism": "Zebrafish", "refseq_name": "putative sodium-coupled neutral amino acid transporter 11", "refseq_ac": [ { "id": "NP_001017644", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001017644", "type": "external" } ], "gene_names_uniprotkb": "slc38a11; zgc:110221", "gene_names_refseq": "slc38a11; zgc:110221", "protein_names_uniprotkb": "Putative sodium-coupled neutral amino acid transporter 11; Solute carrier family 38 member 11", "protein_names_refseq": "putative sodium-coupled neutral amino acid transporter 11", "tax_id": 7955, "disease": "", "pathway": " (dre:550337)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC092805.1, SRR26395017.459049.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA4476766, SAMEA4476772 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000009.1. On or before Jun 12, 2024 this sequence version replaced XP_017213162.1, NP_001017644.1., [RefSeq]; Putative sodium-dependent amino acid/proton antiporter., [UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 3, "predicted_n_glycosites": 3, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 3, "binding_glycan_count": 0, "secondary_ac_list": "Q568L8", "ec_number_list": [], "go_molecular_function": "GO:0015179 L-amino acid transmembrane transporter activity", "go_cellular_component": "GO:0016020 membrane", "go_biological_process": "GO:0006814 sodium ion transport;GO:0003333 amino acid transmembrane transport", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A8KBL5-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000010000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A8WFT6-1", "uniprot_id": [ { "id": "HYKK_DANRE", "url": "https://www.uniprot.org/uniprot/A8WFT6", "type": "external" } ], "mass": 40486.0, "length": 355, "protein_name": "Hydroxylysine kinase", "gene_name": "hykk.2; hykk", "organism": "Zebrafish", "refseq_name": "hydroxylysine kinase", "refseq_ac": [ { "id": "NP_001107059", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001107059", "type": "external" } ], "gene_names_uniprotkb": "hykk.2; hykk; agphd1; hykk; zgc:171550", "gene_names_refseq": "agphd1; hykk.2; hykk; zgc:171550", "protein_names_uniprotkb": "Hydroxylysine kinase; 2.7.1.81; 5-hydroxy-L-lysine kinase", "protein_names_refseq": "5-hydroxy-L-lysine kinase; aminoglycoside phosphotransferase domain-containing protein 1; hydroxylysine kinase", "tax_id": 7955, "disease": "chronic obstructive pulmonary disease (Disease Ontology:DOID:3083); amino acid metabolic disorder (Disease Ontology:DOID:9252)", "pathway": " (dre:559560); (R-DRE-71064)", "pathway_count": 2, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC154451.1, SRR32588726.55062327.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505377, SAMEA3505391 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000022.1. On Aug 9, 2023 this sequence version replaced NP_001107059.1., [RefSeq]; Catalyzes the GTP-dependent phosphorylation of 5-hydroxy-L-lysine., [UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 2, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [ { "id": "2.7.1.81", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.81", "type": "external" } ], "go_molecular_function": "GO:0047992 hydroxylysine kinase activity;GO:0019202 amino acid kinase activity", "go_cellular_component": "GO:0005737 cytoplasm", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A8WFT6-1", "record_type": "protein", "filter_code": "0000000.0000011.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A8WG21-1", "uniprot_id": [ { "id": "SNXAB_DANRE", "url": "https://www.uniprot.org/uniprot/A8WG21", "type": "external" } ], "mass": 19802.0, "length": 170, "protein_name": "Sorting nexin-10B", "gene_name": "snx10b", "organism": "Zebrafish", "refseq_name": "sorting nexin-10B", "refseq_ac": [ { "id": "NP_001103866", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001103866", "type": "external" } ], "gene_names_uniprotkb": "snx10b", "gene_names_refseq": "snx10b", "protein_names_uniprotkb": "Sorting nexin-10B", "protein_names_refseq": "sorting nexin-10B", "tax_id": 7955, "disease": "autosomal recessive osteopetrosis 8 (Disease Ontology:DOID:0110940)", "pathway": " (dre:569469)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "23594743", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC154549.1, DT079855.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505377, SAMEA4476796 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC154549.1. On Nov 16, 2007 this sequence version replaced XP_697954.2., [RefSeq]; Probable phosphoinositide-binding protein involved in protein sorting and membrane trafficking in endosomes., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:1901981 phosphatidylinositol phosphate binding", "go_cellular_component": "GO:0005768 endosome;GO:0010008 endosome membrane", "go_biological_process": "GO:0006886 intracellular protein transport;GO:0060271 cilium assembly;GO:0016050 vesicle organization", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "A8WG21-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A8WG43-1", "uniprot_id": [ { "id": "CCD89_DANRE", "url": "https://www.uniprot.org/uniprot/A8WG43", "type": "external" } ], "mass": 42156.0, "length": 354, "protein_name": "Coiled-coil domain-containing protein 89", "gene_name": "ccdc89", "organism": "Zebrafish", "refseq_name": "coiled-coil domain-containing protein 89", "refseq_ac": [ { "id": "NP_001108038", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001108038", "type": "external" } ], "gene_names_uniprotkb": "ccdc89; boip; zgc:172182", "gene_names_refseq": "boip; ccdc89; zgc:172182", "protein_names_uniprotkb": "Coiled-coil domain-containing protein 89; Bc8 orange-interacting protein", "protein_names_refseq": "coiled-coil domain-containing protein 89", "tax_id": 7955, "disease": "", "pathway": " (dre:100136847)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "14648848", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC154573.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505376, SAMEA3505389 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC154573.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "A8WG43-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A8WGS4-1", "uniprot_id": [ { "id": "TLCD2_DANRE", "url": "https://www.uniprot.org/uniprot/A8WGS4", "type": "external" } ], "mass": 28334.0, "length": 246, "protein_name": "TLC domain-containing protein 2", "gene_name": "tlcd2", "organism": "Zebrafish", "refseq_name": "TLC domain-containing protein 2", "refseq_ac": [ { "id": "NP_001103852", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001103852", "type": "external" } ], "gene_names_uniprotkb": "tlcd2; zgc:175098", "gene_names_refseq": "tlcd2; zgc:175098", "protein_names_uniprotkb": "TLC domain-containing protein 2", "protein_names_refseq": "TLC domain-containing protein 2", "tax_id": 7955, "disease": "", "pathway": " (dre:559420)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC154828.1, EH495502.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC154828.1. On Nov 16, 2007 this sequence version replaced XP_687852.1., [RefSeq]; Regulates the composition and fluidity of the plasma membrane (By similarity). Inhibits the incorporation of membrane-fluidizing phospholipids containing omega-3 long-chain polyunsaturated fatty acids (LCPUFA) and thereby promotes membrane rigidity (By similarity). Does not appear to have any effect on LCPUFA synthesis (By similarity)., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "GO:0007009 plasma membrane organization;GO:0055091 phospholipid homeostasis;GO:0071709 membrane assembly;GO:0097035 regulation of membrane lipid distribution", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A8WGS4-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A8WHP9-1", "uniprot_id": [ { "id": "LRRC3_DANRE", "url": "https://www.uniprot.org/uniprot/A8WHP9", "type": "external" } ], "mass": 30055.0, "length": 266, "protein_name": "Leucine-rich repeat-containing protein 3", "gene_name": "lrrc3", "organism": "Zebrafish", "refseq_name": "leucine-rich repeat-containing protein 3 precursor", "refseq_ac": [ { "id": "NP_001107114", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001107114", "type": "external" } ], "gene_names_uniprotkb": "lrrc3; sc:d0333; si:dkey-253a1.3", "gene_names_refseq": "lrrc3; sc:d0333; si:dkey-253a1.3", "protein_names_uniprotkb": "Leucine-rich repeat-containing protein 3", "protein_names_refseq": "Leucine-rich repeat-containing protein 3; leucine-rich repeat-containing protein 3 precursor", "tax_id": 7955, "disease": "", "pathway": " (dre:100001372)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "18296487;23594743", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: CU468760.1, DV594031.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505376 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000009.1. On Jan 20, 2008 this sequence version replaced XP_001337445.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A8BB12", "ec_number_list": [], "go_molecular_function": "GO:0038023 signaling receptor activity", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "A8WHP9-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A8WHR0-1", "uniprot_id": [ { "id": "DCA17_DANRE", "url": "https://www.uniprot.org/uniprot/A8WHR0", "type": "external" } ], "mass": 59698.0, "length": 526, "protein_name": "DDB1- and CUL4-associated factor 17", "gene_name": "dcaf17", "organism": "Zebrafish", "refseq_name": "DDB1- and CUL4-associated factor 17", "refseq_ac": [ { "id": "NP_001138261", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001138261", "type": "external" } ], "gene_names_uniprotkb": "dcaf17; c2orf37; si:ch211-245g15.4", "gene_names_refseq": "c2orf37; dcaf17", "protein_names_uniprotkb": "DDB1- and CUL4-associated factor 17", "protein_names_refseq": "DDB1- and CUL4-associated factor 17; protein C2orf37 homolog", "tax_id": 7955, "disease": "Woodhouse-Sakati syndrome (Disease Ontology:DOID:0112264)", "pathway": " (dre:558828); (R-DRE-8951664)", "pathway_count": 2, "publication_count": 1, "publication_id_list": "23594743", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: SRR32588725.6947556.1, SRR32588716.26276439.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000009.1. On or before Jul 31, 2025 this sequence version replaced XP_073768083.1, NP_001138261.2., [RefSeq]; May function as a substrate receptor for CUL4-DDB1 E3 ubiquitin-protein ligase complex., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005730 nucleolus;GO:0016020 membrane;GO:0080008 Cul4-RING E3 ubiquitin ligase complex", "go_biological_process": "GO:0016567 protein ubiquitination", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "A8WHR0-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A8WHV3-1", "uniprot_id": [ { "id": "A8WHV3_DANRE", "url": "https://www.uniprot.org/uniprot/A8WHV3", "type": "external" } ], "mass": 25210.0, "length": 224, "protein_name": "Ras-related protein Rab-3", "gene_name": "rab3c", "organism": "Zebrafish", "refseq_name": "ras-related protein Rab-3C", "refseq_ac": [ { "id": "NP_001002530", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001002530", "type": "external" } ], "gene_names_uniprotkb": "rab3c; zgc:92916", "gene_names_refseq": "rab3c; zgc:92916", "protein_names_uniprotkb": "Ras-related protein Rab-3", "protein_names_refseq": "ras-related protein Rab-3C", "tax_id": 7955, "disease": "", "pathway": " (dre:436803); (R-DRE-8873719)", "pathway_count": 2, "publication_count": 8, "publication_id_list": "17640525;18055165;20463035;26004360;27189481;28252024;28396820;31291987", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC076367.1, GFIL01032059.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505383, SAMEA3505386 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000008.1. On or before Jun 17, 2024 this sequence version replaced XP_005166882.1, NP_001002530.1., [RefSeq]; The small GTPases Rab are key regulators of intracellular membrane trafficking, from the formation of transport vesicles to their fusion with membranes. Rabs cycle between an inactive GDP-bound form and an active GTP-bound form that is able to recruit to membranes different sets of downstream effectors directly responsible for vesicle formation, movement, tethering and fusion., [UniProtKB, UniProtKB]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M2BEV5", "ec_number_list": [ { "id": "3.6.5.2", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.5.2", "type": "external" }, { "id": "3.6.5.3", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.5.3", "type": "external" }, { "id": "3.6.5.5", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.5.5", "type": "external" }, { "id": "3.6.1.5", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.1.5", "type": "external" }, { "id": "3.6.5.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.5.-", "type": "external" }, { "id": "3.6.1.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.1.-", "type": "external" }, { "id": "3.6.5.4", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.5.4", "type": "external" } ], "go_molecular_function": "GO:0003924 GTPase activity;GO:0005525 GTP binding;GO:0031489 myosin V binding;GO:0003925 G protein activity", "go_cellular_component": "GO:0005768 endosome;GO:0005886 plasma membrane;GO:0008021 synaptic vesicle", "go_biological_process": "GO:0006886 intracellular protein transport;GO:0006887 exocytosis", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "A8WHV3-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A8WHV7-1", "uniprot_id": [ { "id": "A8WHV7_DANRE", "url": "https://www.uniprot.org/uniprot/A8WHV7", "type": "external" } ], "mass": 12144.0, "length": 113, "protein_name": "Alpha-ketoglutarate dehydrogenase component 4", "gene_name": "kgd4", "organism": "Zebrafish", "refseq_name": "alpha-ketoglutarate dehydrogenase component 4", "refseq_ac": [ { "id": "NP_001107080", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001107080", "type": "external" } ], "gene_names_uniprotkb": "kgd4; mrps36; si:dkey-190g11.7", "gene_names_refseq": "kgd4; mrps36; si:dkey-190g11.7", "protein_names_uniprotkb": "Alpha-ketoglutarate dehydrogenase component 4", "protein_names_refseq": "alpha-ketoglutarate dehydrogenase component 4; mitochondrial ribosomal protein S36", "tax_id": 7955, "disease": "", "pathway": " (dre:567309); (R-DRE-5389840); (R-DRE-5419276); (R-DRE-6783984); (R-DRE-9853506); (R-DRE-9937383)", "pathway_count": 6, "publication_count": 3, "publication_id_list": "24204792;27189481;28252024", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC122242.1, EH440012.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505372, SAMEA3505374 [ECO:0006172] ##Evidence-Data-END## ##RefSeq-Attributes-START## gene product(s) localized to mito. :: inferred from homology ##RefSeq-Attributes-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000008.1. On Jan 20, 2008 this sequence version replaced XP_695695.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NH15", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005739 mitochondrion;GO:0005840 ribosome;GO:0045252 oxoglutarate dehydrogenase complex", "go_biological_process": "GO:0006103 2-oxoglutarate metabolic process", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "A8WHV7-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A8WI00-1", "uniprot_id": [ { "id": "A8WI00_DANRE", "url": "https://www.uniprot.org/uniprot/A8WI00", "type": "external" } ], "mass": 55647.0, "length": 509, "protein_name": "Signal transducing adapter molecule 2", "gene_name": "stam2", "organism": "Zebrafish", "refseq_name": "signal transducing adapter molecule 2", "refseq_ac": [ { "id": "NP_001007370", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001007370", "type": "external" } ], "gene_names_uniprotkb": "stam2; zgc:103628", "gene_names_refseq": "stam2; zgc:103628", "protein_names_uniprotkb": "Signal transducing adapter molecule 2", "protein_names_refseq": "signal transducing adapter molecule 2", "tax_id": 7955, "disease": "", "pathway": " (dre:492497); (R-DRE-9013420)", "pathway_count": 2, "publication_count": 3, "publication_id_list": "19035348;26469318;28252024", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC085566.1, GFIL01039922.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000009.1. On or before Feb 12, 2016 this sequence version replaced XP_009303093.1, NP_001007370.1. Sequence Note: This RefSeq record was created from genomic sequence data because no single transcript from the reference strain was available for the full length of the gene. The extent of this transcript is supported by transcript alignments, RNA-seq data and orthologous data., [RefSeq]", "predicted_glycosites": 3, "predicted_n_glycosites": 0, "predicted_o_glycosites": 3, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 3, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1N302", "ec_number_list": [], "go_molecular_function": "GO:0035091 phosphatidylinositol binding;GO:0043130 ubiquitin binding", "go_cellular_component": "GO:0031901 early endosome membrane;GO:0030139 endocytic vesicle", "go_biological_process": "GO:0007165 signal transduction;GO:0015031 protein transport", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "A8WI00-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A8WIQ7-1", "uniprot_id": [ { "id": "A8WIQ7_DANRE", "url": "https://www.uniprot.org/uniprot/A8WIQ7", "type": "external" } ], "mass": 25356.0, "length": 235, "protein_name": "Oligodendrocyte transcription factor 1 isoform X1", "gene_name": "olig1", "organism": "Zebrafish", "refseq_name": "oligodendrocyte transcription factor 1 isoform X1", "refseq_ac": [ { "id": "XP_005167710", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005167710", "type": "external" } ], "gene_names_uniprotkb": "olig1", "gene_names_refseq": "olig1", "protein_names_uniprotkb": "Oligodendrocyte transcription factor 1 isoform X1", "protein_names_refseq": "oligodendrocyte transcription factor 1 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:100001484)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "16109975;17554554;18160645;19253391;19425111;34568921;35172135;35241802;35754711;39068495", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133184) annotated using gene prediction method: Gnomon, supported by mRNA evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M2BF39", "ec_number_list": [], "go_molecular_function": "GO:0003700 DNA-binding transcription factor activity;GO:0046983 protein dimerization activity;GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific;GO:0070888 E-box binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0045944 positive regulation of transcription by RNA polymerase II;GO:0014003 oligodendrocyte development;GO:0061564 axon development;GO:0007423 sensory organ development", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "A8WIQ7-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A8Y5T1-1", "uniprot_id": [ { "id": "CF276_DANRE", "url": "https://www.uniprot.org/uniprot/A8Y5T1", "type": "external" } ], "mass": 18801.0, "length": 164, "protein_name": "Protein CFAP276", "gene_name": "cfap276", "organism": "Zebrafish", "refseq_name": "protein CFAP276", "refseq_ac": [ { "id": "NP_001107082", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001107082", "type": "external" } ], "gene_names_uniprotkb": "cfap276; si:ch211-163l21.7", "gene_names_refseq": "cfap276; si:ch211-163l21.7", "protein_names_uniprotkb": "Protein CFAP276; Cilia- and flagella-associated protein 276", "protein_names_refseq": "Uncharacterized protein C1orf194 homolog; protein CFAP276", "tax_id": 7955, "disease": "Charcot-Marie-Tooth disease intermediate type (Disease Ontology:DOID:0050543)", "pathway": " (dre:567726)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "23594743", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: EH531310.1, EH505135.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000008.1. On Jan 20, 2008 this sequence version replaced XP_696118.1., [RefSeq]; Microtubule inner protein (MIP) part of the dynein-decorated doublet microtubules (DMTs) in cilia axoneme, which is required for motile cilia beating (By similarity). May play an important role for the maintenance of myelin-axon integrity (By similarity). May affect intracellular Ca(2+) homeostasis (By similarity)., [UniProtKB, UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005856 cytoskeleton;GO:0005879 axonemal microtubule", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "A8Y5T1-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A8Y5U1-1", "uniprot_id": [ { "id": "RIMC1_DANRE", "url": "https://www.uniprot.org/uniprot/A8Y5U1", "type": "external" } ], "mass": 32240.0, "length": 276, "protein_name": "RAB7A-interacting MON1-CCZ1 complex subunit 1", "gene_name": "rimoc1", "organism": "Zebrafish", "refseq_name": "RAB7A-interacting MON1-CCZ1 complex subunit 1", "refseq_ac": [ { "id": "NP_001121701", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001121701", "type": "external" } ], "gene_names_uniprotkb": "rimoc1; si:dkey-46a10.3; wu:fd42g01", "gene_names_refseq": "fd42g01; rimoc1; si:dkey-46a10.3; wu:fd42g01", "protein_names_uniprotkb": "RAB7A-interacting MON1-CCZ1 complex subunit 1; UPF0600 protein C5orf51 homolog", "protein_names_refseq": "RAB7A-interacting MON1-CCZ1 complex subunit 1; UPF0600 protein C5orf51 homolog", "tax_id": 7955, "disease": "", "pathway": " (dre:325885)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "23594743", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC059675.1, EH450485.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from EB868012.1, EH444770.1 and EH566100.1. On Aug 10, 2009 this sequence version replaced XP_691090.1., [RefSeq]; Plays an important role in the removal of damaged mitochondria via mitophagy by controlling the stability and localization of RAB7A (By similarity). Required for the recruitment of RAB7A and ATG9A vesicles to damaged mitochondria and promotes the stability of RAB7A by inhibiting its proteasomal degradation during mitophagy (By similarity)., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q6PBK5", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005829 cytosol", "go_biological_process": "GO:0000423 mitophagy", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "A8Y5U1-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A9C3N2-1", "uniprot_id": [ { "id": "A9C3N2_DANRE", "url": "https://www.uniprot.org/uniprot/A9C3N2", "type": "external" } ], "mass": 37888.0, "length": 325, "protein_name": "Ras association domain-containing protein 2a isoform X1", "gene_name": "rassf2a", "organism": "Zebrafish", "refseq_name": "ras association domain-containing protein 2a isoform X1", "refseq_ac": [ { "id": "XP_005169148", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005169148", "type": "external" } ], "gene_names_uniprotkb": "rassf2a; rassf2; wu:fa04h12; zgc:101844", "gene_names_refseq": "rassf2a; rassf2; wu:fa04h12; zgc:101844", "protein_names_uniprotkb": "Ras association domain-containing protein 2a isoform X1", "protein_names_refseq": "ras association domain-containing protein 2a isoform X1", "tax_id": 7955, "disease": "", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133183) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M2BGD6", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm", "go_biological_process": "GO:0007165 signal transduction;GO:0046330 positive regulation of JNK cascade;GO:1901222 regulation of non-canonical NF-kappaB signal transduction", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A9C3N2-1", "record_type": "protein", "filter_code": "0000000.0000000.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A9C3Q0-1", "uniprot_id": [ { "id": "A9C3Q0_DANRE", "url": "https://www.uniprot.org/uniprot/A9C3Q0", "type": "external" } ], "mass": 70620.0, "length": 613, "protein_name": "2.4.1.50; Procollagen galactosyltransferase 2 precursor", "gene_name": "colgalt2b", "organism": "Zebrafish", "refseq_name": "procollagen galactosyltransferase 2 precursor", "refseq_ac": [ { "id": "NP_001123548", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001123548", "type": "external" } ], "gene_names_uniprotkb": "colgalt2b; LOC100003546x; colgalt2; glt25d2", "gene_names_refseq": "LOC100003546x; colgalt2b; colgalt2; glt25d2", "protein_names_uniprotkb": "2.4.1.50; Procollagen galactosyltransferase 2 precursor", "protein_names_refseq": "collagen beta(1-O)galactosyltransferase 2; glycosyltransferase 25 domain containing 2; procollagen galactosyltransferase 2 precursor", "tax_id": 7955, "disease": "", "pathway": " (dre:100003546); (R-DRE-1650814)", "pathway_count": 2, "publication_count": 2, "publication_id_list": "26469318;27189481", "class_list": "", "function": "##Evidence-Data-START## RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CR382344.9. On Jul 31, 2008 this sequence version replaced XP_001343080.2., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NI33", "ec_number_list": [ { "id": "2.4.1.50", "url": "https://www.rhea-db.org/rhea/?query=ec:2.4.1.50", "type": "external" } ], "go_molecular_function": "GO:0050211 procollagen galactosyltransferase activity", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "A9C3Q0-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A9C3Q3-1", "uniprot_id": [ { "id": "A9C3Q3_DANRE", "url": "https://www.uniprot.org/uniprot/A9C3Q3", "type": "external" } ], "mass": 63124.0, "length": 566, "protein_name": "Anaphase-promoting complex subunit 7", "gene_name": "anapc7", "organism": "Zebrafish", "refseq_name": "anaphase-promoting complex subunit 7", "refseq_ac": [ { "id": "NP_001107057", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001107057", "type": "external" } ], "gene_names_uniprotkb": "anapc7; si:ch211-127h20.1", "gene_names_refseq": "anapc7; si:ch211-127h20.1", "protein_names_uniprotkb": "Anaphase-promoting complex subunit 7", "protein_names_refseq": "anaphase-promoting complex subunit 7", "tax_id": 7955, "disease": "syndromic intellectual disability (Disease Ontology:DOID:0050888)", "pathway": " (dre:558402); (R-DRE-141430); (R-DRE-174048); (R-DRE-174084); (R-DRE-174154); (R-DRE-174178); (R-DRE-174184); (R-DRE-176407); (R-DRE-176408); (R-DRE-176409); (R-DRE-176412); (R-DRE-179409); (R-DRE-2467813); (R-DRE-2559582); (R-DRE-68867); (R-DRE-69017); (R-DRE-983168)", "pathway_count": 17, "publication_count": 2, "publication_id_list": "26469318;29738878", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GFIL01001016.1, GDQH01016220.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000008.1. On Jan 20, 2008 this sequence version replaced XP_686697.2., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NF68", "ec_number_list": [], "go_molecular_function": "GO:0140767 enzyme-substrate adaptor activity", "go_cellular_component": "GO:0005680 anaphase-promoting complex", "go_biological_process": "GO:0051301 cell division;GO:0016567 protein ubiquitination;GO:0045842 positive regulation of mitotic metaphase/anaphase transition", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "A9C3Q3-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A9C3R5-1", "uniprot_id": [ { "id": "A9C3R5_DANRE", "url": "https://www.uniprot.org/uniprot/A9C3R5", "type": "external" } ], "mass": 18500.0, "length": 163, "protein_name": "NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 2", "gene_name": "ndufaf2", "organism": "Zebrafish", "refseq_name": "NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 2", "refseq_ac": [ { "id": "NP_001107122", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001107122", "type": "external" } ], "gene_names_uniprotkb": "ndufaf2; ndufa12l; zgc:101036", "gene_names_refseq": "ndufa12l; ndufaf2; zgc:101036", "protein_names_uniprotkb": "NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 2", "protein_names_refseq": "NADH dehydrogenase (ubiquinone) 1 alpha subcomplex 12, like; NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 2; NADH dehydrogenase (ubiquinone) complex I, assembly factor 2; NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 2", "tax_id": 7955, "disease": "nuclear type mitochondrial complex I deficiency 10 (Disease Ontology:DOID:0112075)", "pathway": " (dre:100003850); (R-DRE-6799198)", "pathway_count": 2, "publication_count": 3, "publication_id_list": "26469318;28252024;38949024", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: SRR32588719.9434910.1, EB793936.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505389, SAMEA3505390 [ECO:0006172] ##Evidence-Data-END## ##RefSeq-Attributes-START## gene product(s) localized to mito. :: inferred from homology ##RefSeq-Attributes-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000008.1. On or before Feb 23, 2008 this sequence version replaced NP_001003770.1, XP_001339976.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NHA3", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005739 mitochondrion;GO:0045271 respiratory chain complex I", "go_biological_process": "GO:0032981 mitochondrial respiratory chain complex I assembly", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "A9C3R5-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A9C3S0-1", "uniprot_id": [ { "id": "A9C3S0_DANRE", "url": "https://www.uniprot.org/uniprot/A9C3S0", "type": "external" } ], "mass": 66631.0, "length": 603, "protein_name": "methylcrotonoyl-CoA carboxylase", "gene_name": "si:ch211-198n5.11", "organism": "Zebrafish", "refseq_name": "methylcrotonoyl-coenzyme A carboxylase 2", "refseq_ac": [ { "id": "NP_001107124", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001107124", "type": "external" } ], "gene_names_uniprotkb": "si:ch211-198n5.11; im:7143041", "gene_names_refseq": "im:7143041; si:ch211-198n5.11", "protein_names_uniprotkb": "methylcrotonoyl-CoA carboxylase; 3-methylcrotonyl-CoA carboxylase 2; 3-methylcrotonyl-CoA carboxylase non-biotin-containing subunit; 3-methylcrotonyl-CoA:carbon dioxide ligase subunit beta; 6.4.1.4", "protein_names_refseq": "methylcrotonoyl-coenzyme A carboxylase 2", "tax_id": 7955, "disease": "", "pathway": " (dre:100004018)", "pathway_count": 1, "publication_count": 3, "publication_id_list": "27189481;28252024;38542412", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GFIL01035804.1, GDQQ01014651.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505376 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000008.1. On Jan 20, 2008 this sequence version replaced XP_001340184.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NFC3", "ec_number_list": [ { "id": "6.4.1.4", "url": "https://www.rhea-db.org/rhea/?query=ec:6.4.1.4", "type": "external" } ], "go_molecular_function": "GO:0004485 methylcrotonoyl-CoA carboxylase activity", "go_cellular_component": "GO:0005739 mitochondrion;GO:1905202 methylcrotonoyl-CoA carboxylase complex", "go_biological_process": "GO:0006552 L-leucine catabolic process", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "A9C3S0-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A9C3S4-1", "uniprot_id": [ { "id": "A9C3S4_DANRE", "url": "https://www.uniprot.org/uniprot/A9C3S4", "type": "external" } ], "mass": 41430.0, "length": 367, "protein_name": "Torsin-3A precursor", "gene_name": "tor3a", "organism": "Zebrafish", "refseq_name": "torsin-3A precursor", "refseq_ac": [ { "id": "NP_001121738", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001121738", "type": "external" } ], "gene_names_uniprotkb": "tor3a; si:ch211-198n5.8", "gene_names_refseq": "si:ch211-198n5.8; tor3a", "protein_names_uniprotkb": "Torsin-3A precursor", "protein_names_refseq": "torsin-3A precursor", "tax_id": 7955, "disease": "", "pathway": " (dre:792835)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "23028827;26469318;27189481;28252024;38542412", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GFIL01041696.1, GDQH01030710.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505371, SAMEA3505372 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000008.1. On Jul 31, 2008 this sequence version replaced XP_001331907.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NH56", "ec_number_list": [], "go_molecular_function": "GO:0005524 ATP binding;GO:0016887 ATP hydrolysis activity", "go_cellular_component": "GO:0005635 nuclear envelope;GO:0005788 endoplasmic reticulum lumen", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "A9C3S4-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A9C3T3-1", "uniprot_id": [ { "id": "A9C3T3_DANRE", "url": "https://www.uniprot.org/uniprot/A9C3T3", "type": "external" } ], "mass": 82046.0, "length": 747, "protein_name": "Solute carrier family 26 member 6", "gene_name": "slc26a6.1; slc26a6.2", "organism": "Zebrafish", "refseq_name": "solute carrier family 26 member 6", "refseq_ac": [ { "id": "NP_001410200", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001410200", "type": "external" } ], "gene_names_uniprotkb": "slc26a6.1; slc26a6.2; LOC100005108; si:dkey-20d21.8; slc26a6b; slc26a6", "gene_names_refseq": "slc26a6.2", "protein_names_uniprotkb": "Solute carrier family 26 member 6", "protein_names_refseq": "slc26a6b; solute carrier family 26 member 6", "tax_id": 7955, "disease": "", "pathway": " (dre:100005108); (dre:558704)", "pathway_count": 2, "publication_count": 4, "publication_id_list": "19641131;19801433;25253178;27189481", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GDQQ01000335.1, SRR32588722.42403929.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505392, SAMEA4476731 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000008.1. On Jul 12, 2023 this sequence version replaced XP_001344243.4., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1Q7V1", "ec_number_list": [], "go_molecular_function": "GO:0019531 oxalate transmembrane transporter activity;GO:0008271 secondary active sulfate transmembrane transporter activity;GO:0015116 sulfate transmembrane transporter activity;GO:0140900 chloride:bicarbonate antiporter activity", "go_cellular_component": "GO:0005886 plasma membrane;GO:0016020 membrane", "go_biological_process": "GO:1902476 chloride transmembrane transport;GO:1902358 sulfate transmembrane transport;GO:0055081 monoatomic anion homeostasis;GO:0009651 response to salt stress", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "A9C3T3-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A9JR56-1", "uniprot_id": [ { "id": "C42S2_DANRE", "url": "https://www.uniprot.org/uniprot/A9JR56", "type": "external" } ], "mass": 9426.0, "length": 85, "protein_name": "CDC42 small effector protein 2", "gene_name": "cdc42se2", "organism": "Zebrafish", "refseq_name": "CDC42 small effector protein 2", "refseq_ac": [ { "id": "NP_001153307", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001153307", "type": "external" } ], "gene_names_uniprotkb": "cdc42se2; zgc:172116", "gene_names_refseq": "cdc42se2; zgc:172116", "protein_names_uniprotkb": "CDC42 small effector protein 2", "protein_names_refseq": "CDC42 small effector protein 2", "tax_id": 7955, "disease": "", "pathway": " (dre:794234); (R-DRE-9013148)", "pathway_count": 2, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC154538.1, SRR32588728.27502164.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN18715719 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000010.1. On May 8, 2009 this sequence version replaced XP_001923670.1., [RefSeq]; Probably involved in the organization of the actin cytoskeleton by acting downstream of CDC42, inducing actin filament assembly., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0031267 small GTPase binding", "go_cellular_component": "GO:0005856 cytoskeleton;GO:0005886 plasma membrane", "go_biological_process": "GO:0035023 regulation of Rho protein signal transduction;GO:0008360 regulation of cell shape;GO:0009966 regulation of signal transduction", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A9JR56-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A9JR86-1", "uniprot_id": [ { "id": "COQ4_DANRE", "url": "https://www.uniprot.org/uniprot/A9JR86", "type": "external" } ], "mass": 30429.0, "length": 271, "protein_name": "Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial", "gene_name": "coq4", "organism": "Zebrafish", "refseq_name": "ubiquinone biosynthesis protein COQ4 homolog, mitochondrial isoform 1", "refseq_ac": [ { "id": "NP_001108192", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001108192", "type": "external" } ], "gene_names_uniprotkb": "coq4; COQ4; si:dkey-170o10.3", "gene_names_refseq": "coq4; si:dkey-170o10.3", "protein_names_uniprotkb": "Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial; 4-hydroxy-3-methoxy-5-polyprenylbenzoate decarboxylase; 4.1.1.130; Coenzyme Q biosynthesis protein 4 homolog", "protein_names_refseq": "4-hydroxy-3-methoxy-5-polyprenylbenzoate decarboxylase; ubiquinone biosynthesis protein COQ4 homolog, mitochondrial isoform 1", "tax_id": 7955, "disease": "coenzyme Q10 deficiency disease (Disease Ontology:DOID:0050730); spastic ataxia (Disease Ontology:DOID:0050952); primary coenzyme Q10 deficiency 7 (Disease Ontology:DOID:0070244)", "pathway": " (dre:100137123); (R-DRE-2142789)", "pathway_count": 2, "publication_count": 2, "publication_id_list": "23594743;38014483", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC155557.1, GFIL01006858.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## ##RefSeq-Attributes-START## gene product(s) localized to mito. :: inferred from homology ##RefSeq-Attributes-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000005.1. On or before Jun 28, 2024 this sequence version replaced XP_017211501.1, NP_001108192.1., [RefSeq]; Biallelic COQ4 Variants in Hereditary Spastic Paraplegia: Clinical and Molecular Characterization., [RefSeq, PubMed]; Lyase that catalyzes the C1-decarboxylation of 4-hydroxy-3-methoxy-5-(all-trans-polyprenyl)benzoic acid into 2-methoxy-6-(all-trans-polyprenyl)phenol during ubiquinone biosynthesis., [UniProtKB, HAMAP, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 3, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A2BFR6", "ec_number_list": [ { "id": "2.7.-.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.-.-", "type": "external" }, { "id": "4.1.1.130", "url": "https://www.rhea-db.org/rhea/?query=ec:4.1.1.130", "type": "external" }, { "id": "1.14.15.45", "url": "https://www.rhea-db.org/rhea/?query=ec:1.14.15.45", "type": "external" }, { "id": "1.14.15.46", "url": "https://www.rhea-db.org/rhea/?query=ec:1.14.15.46", "type": "external" }, { "id": "2.1.1.201", "url": "https://www.rhea-db.org/rhea/?query=ec:2.1.1.201", "type": "external" } ], "go_molecular_function": "GO:0008270 zinc ion binding;GO:0120539 4-hydroxy-3-methoxy-5-polyprenylbenzoate decarboxylase activity", "go_cellular_component": "GO:0031314 extrinsic component of mitochondrial inner membrane;GO:0005739 mitochondrion", "go_biological_process": "GO:0006744 ubiquinone biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "A9JR86-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A9JTG4-1", "uniprot_id": [ { "id": "MFD4B_DANRE", "url": "https://www.uniprot.org/uniprot/A9JTG4", "type": "external" } ], "mass": 58619.0, "length": 536, "protein_name": "Major facilitator superfamily domain-containing protein 4B", "gene_name": "mfsd4b", "organism": "Zebrafish", "refseq_name": "major facilitator superfamily domain-containing protein 4B", "refseq_ac": [ { "id": "NP_001107888", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001107888", "type": "external" } ], "gene_names_uniprotkb": "mfsd4b; zgc:175151", "gene_names_refseq": "im:7150270; mfsd4ab; mfsd4b2; slc60a1b; zgc:175151", "protein_names_uniprotkb": "Major facilitator superfamily domain-containing protein 4B", "protein_names_refseq": "major facilitator superfamily domain containing 4Ab; major facilitator superfamily domain containing 4b; major facilitator superfamily domain-containing protein 4B; mfsd4b", "tax_id": 7955, "disease": "cholangiocarcinoma (Disease Ontology:DOID:4947)", "pathway": " (dre:558146)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC155330.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505372 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC155330.1. On Feb 10, 2008 this sequence version replaced XP_686423.2., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0016020 membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A9JTG4-1", "record_type": "protein", "filter_code": "0000000.0000011.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A9JTH1-1", "uniprot_id": [ { "id": "NCLDA_DANRE", "url": "https://www.uniprot.org/uniprot/A9JTH1", "type": "external" } ], "mass": 22224.0, "length": 193, "protein_name": "Neurocalcin-delta A", "gene_name": "ncalda", "organism": "Zebrafish", "refseq_name": "neurocalcin-delta A", "refseq_ac": [ { "id": "NP_001107882", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001107882", "type": "external" } ], "gene_names_uniprotkb": "ncalda; zgc:175182", "gene_names_refseq": "ncalda; zgc:175182", "protein_names_uniprotkb": "Neurocalcin-delta A", "protein_names_refseq": "neurocalcin-delta A", "tax_id": 7955, "disease": "", "pathway": " (dre:556178)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC155337.1, CD760089.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA4476735, SAMEA4476749 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC155337.1. On Feb 10, 2008 this sequence version replaced XP_684008.1., [RefSeq]; May be involved in the calcium-dependent regulation of rhodopsin phosphorylation. Binds three calcium ions (By similarity)., [UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0003779 actin binding;GO:0005509 calcium ion binding;GO:0015631 tubulin binding", "go_cellular_component": "", "go_biological_process": "GO:0019722 calcium-mediated signaling;GO:0009966 regulation of signal transduction", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A9JTH1-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "B0CLX4-1", "uniprot_id": [ { "id": "VSI10_DANRE", "url": "https://www.uniprot.org/uniprot/B0CLX4", "type": "external" } ], "mass": 57785.0, "length": 529, "protein_name": "V-set and immunoglobulin domain-containing protein 10", "gene_name": "vsig10", "organism": "Zebrafish", "refseq_name": "V-set and immunoglobulin domain-containing protein 10 precursor", "refseq_ac": [ { "id": "NP_001093564", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001093564", "type": "external" } ], "gene_names_uniprotkb": "vsig10; si:ch73-13b6.3", "gene_names_refseq": "fj20c09; si:ch73-13b6.3; vsig10; wu:fj20c09", "protein_names_uniprotkb": "V-set and immunoglobulin domain-containing protein 10", "protein_names_refseq": "V-set and immunoglobulin domain-containing protein 10 precursor; V-set and immunoglobulin domain-containing protein 10", "tax_id": 7955, "disease": "", "pathway": " (dre:100005564)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "23594743", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: CU638770.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CU638770.1. On May 9, 2009 this sequence version replaced NP_001093564.1., [RefSeq]", "predicted_glycosites": 14, "predicted_n_glycosites": 13, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 14, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0016020 membrane;GO:0043005 neuron projection", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "B0CLX4-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000011000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "B0R027-1", "uniprot_id": [ { "id": "B0R027_DANRE", "url": "https://www.uniprot.org/uniprot/B0R027", "type": "external" } ], "mass": 42402.0, "length": 375, "protein_name": "3.4.25.1; Proteasome subunit beta type-11a", "gene_name": "psmb11a", "organism": "Zebrafish", "refseq_name": "proteasome subunit beta type-11a", "refseq_ac": [ { "id": "NP_001007179", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001007179", "type": "external" } ], "gene_names_uniprotkb": "psmb11a; beta5ta; si:ch211-14a17.13", "gene_names_refseq": "beta5ta; psmb11a; si:ch211-14a17.13", "protein_names_uniprotkb": "3.4.25.1; Proteasome subunit beta type-11a", "protein_names_refseq": "proteasome subunit beta 11a; proteasome subunit beta 5ta; proteasome subunit beta type-11a", "tax_id": 7955, "disease": "", "pathway": " (dre:446135)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "21748441;27493218", "class_list": "", "function": "PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AL772295.6., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1N352", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005634 nucleus;GO:0005839 proteasome core complex", "go_biological_process": "GO:0051603 proteolysis involved in protein catabolic process", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "B0R027-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "B0R063-1", "uniprot_id": [ { "id": "B0R063_DANRE", "url": "https://www.uniprot.org/uniprot/B0R063", "type": "external" } ], "mass": 73542.0, "length": 666, "protein_name": "Macrophage-expressed gene 1 protein", "gene_name": "mpeg1.3", "organism": "Zebrafish", "refseq_name": "macrophage expressed 1, tandem duplicate 3 precursor", "refseq_ac": [ { "id": "NP_001116782", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001116782", "type": "external" } ], "gene_names_uniprotkb": "mpeg1.3; si:ch211-247l22.3", "gene_names_refseq": "mpeg1.3; si:ch211-247l22.3", "protein_names_uniprotkb": "Macrophage-expressed gene 1 protein; Perforin-2", "protein_names_refseq": "macrophage expressed 1, tandem duplicate 3 precursor", "tax_id": 7955, "disease": "primary immunodeficiency disease (Disease Ontology:DOID:612)", "pathway": " (dre:795504)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "25247677", "class_list": "", "function": "##Evidence-Data-START## RNAseq introns :: single sample supports all introns SAMN01765705 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000008.1. On Apr 11, 2008 this sequence version replaced XP_001335691.1., [RefSeq]; Pore-forming protein involved in both innate and adaptive immunity. Plays a central role in antigen cross-presentation in dendritic cells by forming a pore in antigen-containing compartments, thereby promoting delivery of antigens for cross-presentation. Also involved in innate immune response following bacterial infection; shows antibacterial activity against a wide spectrum of Gram-positive, Gram-negative and acid-fast bacteria. Reduces the viability of the intracytosolic pathogen L.monocytogenes by inhibiting acidification of the phagocytic vacuole of host cells which restricts bacterial translocation from the vacuole to the cytosol. Required for the antibacterial activity of reactive oxygen species and nitric oxide., [UniProtKB, UniProtKB]; Pore-forming protein that plays a central role in antigen cross-presentation in dendritic cells by mediating delivery of antigens for cross-presentation. Dendritic cells bridge innate and adaptive immunity by capturing exogenous antigens on MHC class-I molecules and presenting them to naive CD8(+) T-cells. Acts by forming a pore in antigen-containing compartments, promoting the release of antigens into the cytosol, enabling generation of MHCI:peptide complexes and T-cell priming., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NIM6", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0030670 phagocytic vesicle membrane", "go_biological_process": "GO:0045087 innate immune response;GO:0002250 adaptive immune response;GO:0042742 defense response to bacterium", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "B0R063-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "B0R0B3-1", "uniprot_id": [ { "id": "PGM5_DANRE", "url": "https://www.uniprot.org/uniprot/B0R0B3", "type": "external" } ], "mass": 62256.0, "length": 567, "protein_name": "Phosphoglucomutase-like protein 5", "gene_name": "pgm5", "organism": "Zebrafish", "refseq_name": "phosphoglucomutase-like protein 5", "refseq_ac": [ { "id": "NP_001119868", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001119868", "type": "external" } ], "gene_names_uniprotkb": "pgm5; Aciculin", "gene_names_refseq": "pgm5; si:dkey-91m11.4", "protein_names_uniprotkb": "Phosphoglucomutase-like protein 5", "protein_names_refseq": "aciculin; phosphoglucomutase-like protein 5", "tax_id": 7955, "disease": "congenital disorder of glycosylation It (Disease Ontology:DOID:0080570)", "pathway": " (dre:560297)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "23594743;24963132", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: SRR32588734.449394.1, SRR26395013.1016786.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN01765705, SAMN06350654 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000008.1. On Jul 31, 2008 this sequence version replaced XP_688786.2., [RefSeq]; Required for myofilament organization and subsequent function of mature myofibrils in both cardiac and skeletal muscles., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NGN0", "ec_number_list": [], "go_molecular_function": "GO:0016868 intramolecular phosphotransferase activity", "go_cellular_component": "GO:0005829 cytosol;GO:0005856 cytoskeleton;GO:0005912 adherens junction;GO:0042383 sarcolemma;GO:0030055 cell-substrate junction", "go_biological_process": "GO:0014706 striated muscle tissue development;GO:0005975 carbohydrate metabolic process;GO:0030239 myofibril assembly", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "B0R0B3-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "B0R0I5-1", "uniprot_id": [ { "id": "B0R0I5_DANRE", "url": "https://www.uniprot.org/uniprot/B0R0I5", "type": "external" } ], "mass": 21793.0, "length": 199, "protein_name": "Cerebellin 12 precursor", "gene_name": "cbln12", "organism": "Zebrafish", "refseq_name": "cerebellin 12 precursor", "refseq_ac": [ { "id": "NP_001230247", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001230247", "type": "external" } ], "gene_names_uniprotkb": "cbln12; si:ch211-10e2.3; si:ch211-10e2.5", "gene_names_refseq": "cbln12; si:ch211-10e2.3; si:ch211-10e2.5", "protein_names_uniprotkb": "Cerebellin 12 precursor", "protein_names_refseq": "cerebellin 12 precursor; cerebellin-1; sghC1q12", "tax_id": 7955, "disease": "", "pathway": " (dre:100007940)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "21683091;27189481;27615194;29548943;31068795;33952613;36009362;38456494", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: EH435575.1, EH434128.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000002.1. On Aug 11, 2011 this sequence version replaced XP_003197924.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NZ60", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0098978 glutamatergic synapse;GO:0005615 extracellular space;GO:0043083 synaptic cleft", "go_biological_process": "GO:0099558 maintenance of synapse structure;GO:0099550 trans-synaptic signaling, modulating synaptic transmission", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "B0R0I5-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "B0R0W1-1", "uniprot_id": [ { "id": "B0R0W1_DANRE", "url": "https://www.uniprot.org/uniprot/B0R0W1", "type": "external" } ], "mass": 150914.0, "length": 1321, "protein_name": "Tetratricopeptide repeat protein 21B", "gene_name": "ttc21b", "organism": "Zebrafish", "refseq_name": "tetratricopeptide repeat protein 21B", "refseq_ac": [ { "id": "NP_001121730", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001121730", "type": "external" } ], "gene_names_uniprotkb": "ttc21b; sb:cb947", "gene_names_refseq": "sb:cb947; ttc21b", "protein_names_uniprotkb": "Tetratricopeptide repeat protein 21B", "protein_names_refseq": "tetratricopeptide repeat protein 21B", "tax_id": 7955, "disease": "asphyxiating thoracic dystrophy 4 (Disease Ontology:DOID:0110088); nephronophthisis 12 (Disease Ontology:DOID:0111119); cystic kidney disease (Disease Ontology:DOID:2975)", "pathway": " (dre:569823); (R-DRE-5610787)", "pathway_count": 2, "publication_count": 4, "publication_id_list": "21258341;26469318;27189481;36273201", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GDQH01008240.1, SRR26395050.760633.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000009.1. On Jun 25, 2025 this sequence version replaced NP_001121730.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 3, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NHS0", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005929 cilium;GO:0030991 intraciliary transport particle A", "go_biological_process": "GO:0007369 gastrulation;GO:0061512 protein localization to cilium;GO:0035721 intraciliary retrograde transport", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "B0R0W1-1", "record_type": "protein", "filter_code": "0000000.0000111.010000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "B0R155-1", "uniprot_id": [ { "id": "B0R155_DANRE", "url": "https://www.uniprot.org/uniprot/B0R155", "type": "external" } ], "mass": 48119.0, "length": 411, "protein_name": "Draculin-like, tandem duplicate 2", "gene_name": "drll.2", "organism": "Zebrafish", "refseq_name": "draculin-like, tandem duplicate 2", "refseq_ac": [ { "id": "NP_001159918", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001159918", "type": "external" } ], "gene_names_uniprotkb": "drll.2; drl.2; si:dkey-261j4.4", "gene_names_refseq": "drl.2; drll.2; si:dkey-261j4.4", "protein_names_uniprotkb": "Draculin-like, tandem duplicate 2", "protein_names_refseq": "draculin-like, tandem duplicate 2", "tax_id": 7955, "disease": "", "pathway": " (dre:555524)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "25051985;31451684;31852685;35697798;36420817;36741438", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: SRR26395062.1198677.1, SRR26395014.1080915.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA4476767 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000005.1. On Oct 25, 2009 this sequence version replaced XP_683141.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NSP5", "ec_number_list": [], "go_molecular_function": "GO:0008270 zinc ion binding;GO:0000977 RNA polymerase II transcription regulatory region sequence-specific DNA binding;GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006357 regulation of transcription by RNA polymerase II", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "B0R155-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "B0R157-1", "uniprot_id": [ { "id": "B0R157_DANRE", "url": "https://www.uniprot.org/uniprot/B0R157", "type": "external" } ], "mass": 39578.0, "length": 350, "protein_name": "Peroxisome assembly protein 12", "gene_name": "pex12", "organism": "Zebrafish", "refseq_name": "peroxisome assembly protein 12", "refseq_ac": [ { "id": "NP_956499", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_956499", "type": "external" } ], "gene_names_uniprotkb": "pex12; zgc:56182", "gene_names_refseq": "pex12; zgc:56182", "protein_names_uniprotkb": "Peroxisome assembly protein 12; Peroxin-12", "protein_names_refseq": "peroxisome assembly protein 12", "tax_id": 7955, "disease": "peroxisome biogenesis disorder 3A (Disease Ontology:DOID:0080478); peroxisome biogenesis disorder 3B (Disease Ontology:DOID:0081241)", "pathway": " (dre:393174); (R-DRE-9033241); (R-DRE-9603798)", "pathway_count": 3, "publication_count": 3, "publication_id_list": "15520368;26469318;35295584", "class_list": "", "function": "Component of a retrotranslocation channel required for peroxisome organization by mediating export of the PEX5 receptor from peroxisomes to the cytosol, thereby promoting PEX5 recycling. The retrotranslocation channel is composed of PEX2, PEX10 and PEX12; each subunit contributing transmembrane segments that coassemble into an open channel that specifically allows the passage of PEX5 through the peroxisomal membrane. PEX12 also regulates PEX5 recycling by activating the E3 ubiquitin-protein ligase activity of PEX10. When PEX5 recycling is compromised, PEX12 stimulates PEX10-mediated polyubiquitination of PEX5, leading to its subsequent degradation., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 2, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8N7V001", "ec_number_list": [], "go_molecular_function": "GO:0008270 zinc ion binding;GO:0004842 ubiquitin-protein transferase activity", "go_cellular_component": "GO:1990429 peroxisomal importomer complex;GO:0005778 peroxisomal membrane", "go_biological_process": "GO:0016558 protein import into peroxisome matrix;GO:0006513 protein monoubiquitination", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "B0R157-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "B0R159-1", "uniprot_id": [ { "id": "B0R159_DANRE", "url": "https://www.uniprot.org/uniprot/B0R159", "type": "external" } ], "mass": 47881.0, "length": 428, "protein_name": "Protein-serine/threonine kinase", "gene_name": "bckdk", "organism": "Zebrafish", "refseq_name": "branched-chain alpha-ketoacid dehydrogenase kinase", "refseq_ac": [ { "id": "NP_998225", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_998225", "type": "external" } ], "gene_names_uniprotkb": "bckdk; cb233; wu:fa04g07; wu:fb80b08; zgc:55984", "gene_names_refseq": "bckdk; cb233; wu:fa04g07; wu:fb80b08; zgc:55984", "protein_names_uniprotkb": "Protein-serine/threonine kinase; 2.7.11.-", "protein_names_refseq": "branched chain alpha-ketoacid dehydrogenase kinase; branched-chain alpha-ketoacid dehydrogenase kinase", "tax_id": 7955, "disease": "autism spectrum disorder (Disease Ontology:DOID:0060041); branched-chain keto acid dehydrogenase kinase deficiency (Disease Ontology:DOID:0090126)", "pathway": " (dre:282677); (R-DRE-70895)", "pathway_count": 2, "publication_count": 4, "publication_id_list": "26469318;27458428;28252024;37305084", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC051774.1, GDQH01008647.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## ##RefSeq-Attributes-START## gene product(s) localized to mito. :: inferred from homology ##RefSeq-Attributes-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000005.1, EH507568.1 and GW712489.1. On May 16, 2015 this sequence version replaced NP_998225.1. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 2, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1PEI5", "ec_number_list": [ { "id": "2.7.11.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.-", "type": "external" } ], "go_molecular_function": "GO:0004740 pyruvate dehydrogenase (acetyl-transferring) kinase activity;GO:0005524 ATP binding", "go_cellular_component": "GO:0005739 mitochondrion;GO:0005759 mitochondrial matrix", "go_biological_process": "GO:0010906 regulation of glucose metabolic process;GO:0010510 regulation of pyruvate decarboxylation to acetyl-CoA", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "B0R159-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "B0R174-1", "uniprot_id": [ { "id": "B0R174_DANRE", "url": "https://www.uniprot.org/uniprot/B0R174", "type": "external" } ], "mass": 15091.0, "length": 132, "protein_name": "Retinol-binding protein 1.1", "gene_name": "rbp1.1", "organism": "Zebrafish", "refseq_name": "retinol-binding protein 1.1", "refseq_ac": [ { "id": "NP_998060", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_998060", "type": "external" } ], "gene_names_uniprotkb": "rbp1.1; rbp1b; rbp1; sb:eu611; zgc:100825", "gene_names_refseq": "rbp1.1; rbp1b; rbp1; sb:eu611; zgc:100825", "protein_names_uniprotkb": "Retinol-binding protein 1.1", "protein_names_refseq": "cellular retinol-binding protein type 1b; retinol binding protein 1b, cellular; retinol-binding protein 1.1", "tax_id": 7955, "disease": "multiple myeloma (Disease Ontology:DOID:9538)", "pathway": " (dre:791484); (R-DRE-2453902); (R-DRE-975634)", "pathway_count": 3, "publication_count": 10, "publication_id_list": "15509725;22580571;23632098;24045113;24174574;25434820;28193729;33251495;34208498;35269606", "class_list": "", "function": "", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1PFY3", "ec_number_list": [], "go_molecular_function": "GO:0005504 fatty acid binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005829 cytosol", "go_biological_process": "GO:0015908 fatty acid transport", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "B0R174-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "B0R1C3-1", "uniprot_id": [ { "id": "B0R1C3_DANRE", "url": "https://www.uniprot.org/uniprot/B0R1C3", "type": "external" } ], "mass": 14370.0, "length": 124, "protein_name": "Glucagon b precursor", "gene_name": "gcgb", "organism": "Zebrafish", "refseq_name": "glucagon b precursor", "refseq_ac": [ { "id": "NP_001229699", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001229699", "type": "external" } ], "gene_names_uniprotkb": "gcgb", "gene_names_refseq": "gcgb", "protein_names_uniprotkb": "Glucagon b precursor", "protein_names_refseq": "glucagon b precursor", "tax_id": 7955, "disease": "Alzheimer's disease (Disease Ontology:DOID:10652); prediabetes syndrome (Disease Ontology:DOID:11716)", "pathway": " (dre:436584); (R-DRE-163359); (R-DRE-381676); (R-DRE-381771); (R-DRE-416476); (R-DRE-420092); (R-DRE-422085)", "pathway_count": 7, "publication_count": 10, "publication_id_list": "14990222;16731775;20138234;23776481;26446275;36334626;36646689;38717324;38732518;39075492", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: EH500456.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from EH500456.1. On Jun 27, 2011 this sequence version replaced XP_002667870.1. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 2, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1P2V6", "ec_number_list": [], "go_molecular_function": "GO:0031769 glucagon receptor binding;GO:0005179 hormone activity", "go_cellular_component": "GO:0005576 extracellular region", "go_biological_process": "GO:0042594 response to starvation", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "B0R1C3-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "B0S4Y7-1", "uniprot_id": [ { "id": "B0S4Y7_DANRE", "url": "https://www.uniprot.org/uniprot/B0S4Y7", "type": "external" } ], "mass": 89620.0, "length": 789, "protein_name": "2.7.11.25; Mitogen-activated protein kinase kinase kinase 20", "gene_name": "map3k20a", "organism": "Zebrafish", "refseq_name": "mitogen-activated protein kinase kinase kinase 20", "refseq_ac": [ { "id": "NP_001314869", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001314869", "type": "external" } ], "gene_names_uniprotkb": "map3k20a; si:dkey-15i8.3; zak", "gene_names_refseq": "map3k20a; si:dkey-15i8.3; zak", "protein_names_uniprotkb": "2.7.11.25; Mitogen-activated protein kinase kinase kinase 20", "protein_names_refseq": "mitogen-activated protein kinase kinase kinase 20; sterile alpha motif and leucine zipper containing kinase AZK", "tax_id": 7955, "disease": "split hand-foot malformation (Disease Ontology:DOID:0090020); centronuclear myopathy 6 with fiber-type disproportion (Disease Ontology:DOID:0111221)", "pathway": " (dre:559247)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "26469318;37427997;37675820;38060659", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: SRR32588733.2842585.1, SRR32588724.787382.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000009.1. On May 28, 2016 this sequence version replaced XP_687660.2. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence because no single transcript was available for the full length of the gene. The extent of this transcript is supported by RNA-seq and orthologous data., [RefSeq]; Myofibrillar myopathy hallmarks associated with ZAK deficiency. Erratum:[Hum Mol Genet. 2023 Dec 1;32(24):3390. doi: 10.1093/hmg/ddad168. PMID: 37788121], [RefSeq, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 2, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1P394", "ec_number_list": [], "go_molecular_function": "GO:0005524 ATP binding;GO:0004709 MAP kinase kinase kinase activity", "go_cellular_component": "GO:0005737 cytoplasm", "go_biological_process": "GO:0051403 stress-activated MAPK cascade", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "B0S4Y7-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "B0S519-1", "uniprot_id": [ { "id": "B0S519_DANRE", "url": "https://www.uniprot.org/uniprot/B0S519", "type": "external" } ], "mass": 24325.0, "length": 213, "protein_name": "Calcium-binding protein 7", "gene_name": "cabp7b", "organism": "Zebrafish", "refseq_name": "calcium-binding protein 7", "refseq_ac": [ { "id": "XP_683885", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_683885", "type": "external" } ], "gene_names_uniprotkb": "cabp7b", "gene_names_refseq": "cabp7b", "protein_names_uniprotkb": "Calcium-binding protein 7", "protein_names_refseq": "calcium-binding protein 7", "tax_id": 7955, "disease": "", "pathway": " (dre:556082)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133180) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8N7T701", "ec_number_list": [], "go_molecular_function": "GO:0005509 calcium ion binding", "go_cellular_component": "GO:0005886 plasma membrane;GO:0032588 trans-Golgi network membrane;GO:0048471 perinuclear region of cytoplasm", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "B0S519-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "B0S521-1", "uniprot_id": [ { "id": "B0S521_DANRE", "url": "https://www.uniprot.org/uniprot/B0S521", "type": "external" } ], "mass": 40754.0, "length": 367, "protein_name": "Uncharacterized protein LOC100141493 precursor; Uncharacterized protein isoform X1", "gene_name": "si:ch211-222f23.6", "organism": "Zebrafish", "refseq_name": "uncharacterized protein LOC100141493 precursor", "refseq_ac": [ { "id": "NP_001120876", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001120876", "type": "external" } ], "gene_names_uniprotkb": "si:ch211-222f23.6", "gene_names_refseq": "si:ch211-222f23.6", "protein_names_uniprotkb": "Uncharacterized protein LOC100141493 precursor; Uncharacterized protein isoform X1", "protein_names_refseq": "uncharacterized protein LOC100141493 precursor", "tax_id": 7955, "disease": "", "pathway": " (dre:100141493)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "15520368;27189481", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: CU458958.1, GDQH01016065.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA708836, SAMN18715698 [ECO:0000348] ##Evidence-Data-END## PREDICTED REFSEQ: This record has not been reviewed and the function is unknown. The reference sequence was derived from JBMGRA010000009.1. On May 19, 2009 this sequence version replaced XP_001922669.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NJK3;A0AC58GCU8", "ec_number_list": [], "go_molecular_function": "GO:0098631 cell adhesion mediator activity", "go_cellular_component": "GO:0005886 plasma membrane;GO:0005912 adherens junction", "go_biological_process": "GO:0007156 homophilic cell adhesion via plasma membrane adhesion molecules;GO:0007157 heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "B0S521-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "B0S5A5-1", "uniprot_id": [ { "id": "B0S5A5_DANRE", "url": "https://www.uniprot.org/uniprot/B0S5A5", "type": "external" } ], "mass": 44647.0, "length": 400, "protein_name": "Uncharacterized protein si:ch211-150o23.3", "gene_name": "si:ch211-150o23.3", "organism": "Zebrafish", "refseq_name": "uncharacterized protein si:ch211-150o23.3", "refseq_ac": [ { "id": "XP_021334071", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021334071", "type": "external" } ], "gene_names_uniprotkb": "si:ch211-150o23.3", "gene_names_refseq": "si:ch211-150o23.3", "protein_names_uniprotkb": "Uncharacterized protein si:ch211-150o23.3", "protein_names_refseq": "uncharacterized protein si:ch211-150o23.3", "tax_id": 7955, "disease": "", "pathway": " (dre:799202); (R-DRE-3000471)", "pathway_count": 2, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133183) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M9QE27", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "B0S5A5-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "B0S5A8-1", "uniprot_id": [ { "id": "B0S5A8_DANRE", "url": "https://www.uniprot.org/uniprot/B0S5A8", "type": "external" } ], "mass": 35938.0, "length": 312, "protein_name": "Alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5", "gene_name": "st6galnac5b", "organism": "Zebrafish", "refseq_name": "alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5b precursor", "refseq_ac": [ { "id": "NP_001006663", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001006663", "type": "external" } ], "gene_names_uniprotkb": "st6galnac5b; siat7E; st6galnac5-r1; st6galnac5; zgc:92262", "gene_names_refseq": "siat7E; st6galnac5-r1; st6galnac5b; st6galnac5; zgc:92262", "protein_names_uniprotkb": "Alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5; GD1 alpha synthase; GalNAc alpha-2,6-sialyltransferase V; ST6GalNAc V; Sialyltransferase 7E", "protein_names_refseq": "ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1, 3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5; alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5b precursor; sialyltransferase 7E", "tax_id": 7955, "disease": "", "pathway": " (dre:407716)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "15843597;22352757;27615194;30405127", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GDQH01001836.1, BC081635.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA4476808, SAMEA4476816 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000008.1. On Sep 5, 2015 this sequence version replaced NP_001006663.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]; Predominantly catalyzes the biosynthesis of ganglioside GD1alpha from GM1b in the brain, by transferring the sialyl group (N-acetyl-alpha-neuraminyl or NeuAc) from CMP-NeuAc to the GalNAc residue on the NeuAc-alpha-2,3-Gal-beta-1,3-GalNAc sequence of GM1b. GD1alpha is a critical molecule in the communication and interaction between neuronal cells and their supportive cells, particularly in brain tissues, and functions as an adhesion molecule in the process of metastasis. Also shows activity towards sialyl Lc4Cer (N-acetyl-alpha-neuraminosyl-(2->3)-beta-D-galactosyl-(1->3)-N-acetyl-beta-D-glucosaminyl-(1->3)-beta-D-galactosyl-(1->4)-beta-D-glucosyl-(1<->1')-N-acyl-sphing-4-enine) generating disialyl Lc4Cer, which can lead to the synthesis of disialyl Lewis a (Le(a)), suggested to be a cancer-associated antigen., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1N2Y8", "ec_number_list": [], "go_molecular_function": "GO:0001665 alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase activity", "go_cellular_component": "GO:0000139 Golgi membrane", "go_biological_process": "GO:0009101 glycoprotein biosynthetic process;GO:0009311 oligosaccharide metabolic process;GO:0001574 ganglioside biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "B0S5A8-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "B0S5B3-1", "uniprot_id": [ { "id": "B0S5B3_DANRE", "url": "https://www.uniprot.org/uniprot/B0S5B3", "type": "external" } ], "mass": 27217.0, "length": 233, "protein_name": "Uncharacterized protein LOC560966", "gene_name": "si:ch211-158d24.4", "organism": "Zebrafish", "refseq_name": "uncharacterized protein LOC560966", "refseq_ac": [ { "id": "NP_001417780", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001417780", "type": "external" } ], "gene_names_uniprotkb": "si:ch211-158d24.4", "gene_names_refseq": "si:ch211-158d24.4", "protein_names_uniprotkb": "Uncharacterized protein LOC560966", "protein_names_refseq": "tnfsf15; uncharacterized protein LOC560966", "tax_id": 7955, "disease": "", "pathway": " (dre:560966)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "21527275;26469318", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GDQQ01012276.1, GDQH01023906.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505371, SAMEA3505372 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000008.1. On May 31, 2024 this sequence version replaced XP_005169142.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M2BGG0", "ec_number_list": [], "go_molecular_function": "GO:0005125 cytokine activity;GO:0005164 tumor necrosis factor receptor binding", "go_cellular_component": "GO:0005615 extracellular space;GO:0016020 membrane", "go_biological_process": "GO:0006955 immune response;GO:0007166 cell surface receptor signaling pathway;GO:0043123 positive regulation of canonical NF-kappaB signal transduction;GO:2001238 positive regulation of extrinsic apoptotic signaling pathway", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "B0S5B3-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "B0S5B9-1", "uniprot_id": [ { "id": "B0S5B9_DANRE", "url": "https://www.uniprot.org/uniprot/B0S5B9", "type": "external" } ], "mass": 32824.0, "length": 294, "protein_name": "Synaptophysin", "gene_name": "sypa", "organism": "Zebrafish", "refseq_name": "synaptophysin a", "refseq_ac": [ { "id": "NP_001137449", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001137449", "type": "external" } ], "gene_names_uniprotkb": "sypa; syp", "gene_names_refseq": "sypa; syp", "protein_names_uniprotkb": "Synaptophysin", "protein_names_refseq": "synaptophysin a", "tax_id": 7955, "disease": "non-syndromic X-linked intellectual disability 96 (Disease Ontology:DOID:0112035); Alzheimer's disease (Disease Ontology:DOID:10652); alcohol use disorder (Disease Ontology:DOID:1574)", "pathway": " (dre:559698)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "27189481;28252024;32004591;33352109;33577748;36613611", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: DN857308.1, GFIL01040291.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000008.1. On Jan 22, 2009 this sequence version replaced XP_688153.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]; Possibly involved in structural functions as organizing other membrane components or in targeting the vesicles to the plasma membrane. Involved in the regulation of short-term and long-term synaptic plasticity., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 3, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M2BEI2", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0048786 presynaptic active zone;GO:0043005 neuron projection;GO:0030672 synaptic vesicle membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "B0S5B9-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "B0S5E9-1", "uniprot_id": [ { "id": "B0S5E9_DANRE", "url": "https://www.uniprot.org/uniprot/B0S5E9", "type": "external" } ], "mass": 39604.0, "length": 350, "protein_name": "Novel immune-type receptor 13 isoform 1 precursor", "gene_name": "nitr13", "organism": "Zebrafish", "refseq_name": "novel immune-type receptor 13 isoform 1 precursor", "refseq_ac": [ { "id": "NP_001121856", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001121856", "type": "external" } ], "gene_names_uniprotkb": "nitr13; si:dkey-149k8.4", "gene_names_refseq": "nitr13; si:dkey-149k8.4", "protein_names_uniprotkb": "Novel immune-type receptor 13 isoform 1 precursor", "protein_names_refseq": "novel immune-type receptor 13 isoform 1 precursor", "tax_id": 7955, "disease": "", "pathway": "", "pathway_count": 0, "publication_count": 3, "publication_id_list": "18330557;18565225;20012603", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: EH456749.1, GDQH01027058.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505375, SAMEA3505383 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000014.1. On Jul 28, 2025 this sequence version replaced NP_001121856.1., [RefSeq]; Sequence features of the chromosomal region encoding nitr13 suggest that this gene arose via retrotransposition., [RefSeq, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NHZ4", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "GO:0009617 response to bacterium;GO:0002376 immune system process", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "B0S5E9-1", "record_type": "protein", "filter_code": "0000000.0000100.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "B0S5H7-1", "uniprot_id": [ { "id": "B0S5H7_DANRE", "url": "https://www.uniprot.org/uniprot/B0S5H7", "type": "external" } ], "mass": 19236.0, "length": 170, "protein_name": "Uncharacterized protein LOC100002243", "gene_name": "si:ch211-229n2.7", "organism": "Zebrafish", "refseq_name": "uncharacterized protein LOC100002243", "refseq_ac": [ { "id": "NP_001116794", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001116794", "type": "external" } ], "gene_names_uniprotkb": "si:ch211-229n2.7; fb15h06; wu:fb15h06", "gene_names_refseq": "fb15h06; plaat1l.2; plaat1l2; si:ch211-229n2.7; wu:fb15h06", "protein_names_uniprotkb": "Uncharacterized protein LOC100002243", "protein_names_refseq": "uncharacterized protein LOC100002243", "tax_id": 7955, "disease": "", "pathway": " (dre:100002243)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "24683187;26469318;27189481;31415728;38977258", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: DV584252.1, GDQH01029521.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## PREDICTED REFSEQ: This record has not been reviewed and the function is unknown. The reference sequence was derived from JBMGRA010000008.1. On Apr 11, 2008 this sequence version replaced XP_001335911.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NIN1", "ec_number_list": [], "go_molecular_function": "GO:0004623 phospholipase A2 activity;GO:0008970 phospholipase A1 activity;GO:0016410 N-acyltransferase activity", "go_cellular_component": "GO:0005737 cytoplasm", "go_biological_process": "GO:0070292 N-acylphosphatidylethanolamine metabolic process", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "B0S5H7-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "B0S5J5-1", "uniprot_id": [ { "id": "B0S5J5_DANRE", "url": "https://www.uniprot.org/uniprot/B0S5J5", "type": "external" } ], "mass": 32727.0, "length": 285, "protein_name": "Alpha-tocopherol transfer protein", "gene_name": "ttpa", "organism": "Zebrafish", "refseq_name": "alpha-tocopherol transfer protein", "refseq_ac": [ { "id": "NP_956025", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_956025", "type": "external" } ], "gene_names_uniprotkb": "ttpa; wu:fd44e05; zgc:66361", "gene_names_refseq": "ttpa; wu:fd44e05; zgc:66361", "protein_names_uniprotkb": "Alpha-tocopherol transfer protein", "protein_names_refseq": "alpha-tocopherol transfer protein; tocopherol (alpha) transfer protein (ataxia (Friedreich-like) with vitamin E deficiency)", "tax_id": 7955, "disease": "familial isolated deficiency of vitamin E (Disease Ontology:DOID:0090028)", "pathway": " (dre:325906); (R-DRE-8877627)", "pathway_count": 2, "publication_count": 10, "publication_id_list": "15520368;16872691;21684137;23077608;26469318;31680844;32958954;34119630;34208660;39778749", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GDQH01015346.1, GFIL01042243.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505376 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000002.1. On Feb 4, 2011 this sequence version replaced NP_956025.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]; Gene Expression of CRAL_TRIO Family Proteins modulated by Vitamin E Deficiency in Zebrafish (Danio Rerio)., [RefSeq, PubMed]; We conclude that TTP is essential for early development of the vertebrate central nervous system., [RefSeq, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1PFT6", "ec_number_list": [], "go_molecular_function": "GO:1902936 phosphatidylinositol bisphosphate binding;GO:0008431 vitamin E binding;GO:0120013 lipid transfer activity", "go_cellular_component": "GO:0005770 late endosome", "go_biological_process": "GO:0007417 central nervous system development;GO:0051180 vitamin transport;GO:0043009 chordate embryonic development;GO:0042360 vitamin E metabolic process", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "B0S5J5-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "B0S5P9-1", "uniprot_id": [ { "id": "B0S5P9_DANRE", "url": "https://www.uniprot.org/uniprot/B0S5P9", "type": "external" } ], "mass": 132528.0, "length": 1202, "protein_name": "Fibronectin type III domain containing 3Ba", "gene_name": "fndc3ba", "organism": "Zebrafish", "refseq_name": "fibronectin type III domain containing 3Ba", "refseq_ac": [ { "id": "NP_001153304", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001153304", "type": "external" } ], "gene_names_uniprotkb": "fndc3ba; im:7137566; si:dkeyp-38b6.3", "gene_names_refseq": "fndc3ba; im:7137566; si:dkeyp-38b6.3", "protein_names_uniprotkb": "Fibronectin type III domain containing 3Ba", "protein_names_refseq": "fibronectin type III domain containing 3Ba", "tax_id": 7955, "disease": "", "pathway": " (dre:572313)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "15520368;24683187;26469318;27189481", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: SRR32588733.2781255.1, SRR32588732.28909924.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA4476796, SAMEA4476813 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000002.1. On May 8, 2009 this sequence version replaced XP_701112.2., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M2BAK9;A0AC58H3P1", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0016020 membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "B0S5P9-1", "record_type": "protein", "filter_code": "0000000.0000101.010000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "B0S5S7-1", "uniprot_id": [ { "id": "B0S5S7_DANRE", "url": "https://www.uniprot.org/uniprot/B0S5S7", "type": "external" } ], "mass": 42870.0, "length": 391, "protein_name": "LIM/homeobox protein Lhx4", "gene_name": "lhx4", "organism": "Zebrafish", "refseq_name": "LIM/homeobox protein Lhx4", "refseq_ac": [ { "id": "NP_001116445", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001116445", "type": "external" } ], "gene_names_uniprotkb": "lhx4; si:dkeyp-35f11.3", "gene_names_refseq": "lhx4; si:dkeyp-35f11.3", "protein_names_uniprotkb": "LIM/homeobox protein Lhx4", "protein_names_refseq": "LIM/homeobox protein Lhx4", "tax_id": 7955, "disease": "combined pituitary hormone deficiency 4 (Disease Ontology:DOID:0061017); combined pituitary hormone deficiency (Disease Ontology:DOID:9410)", "pathway": " (dre:571943)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "16672347;19369545;25231761;25556858;26469318;28252024;33479361;36824359;39000439", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GFIL01014454.1, SRR32588734.2421602.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA4476810 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000008.1. On Apr 4, 2008 this sequence version replaced XP_700682.2. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications., [RefSeq]; LIM Homeobox 4 (lhx4) regulates retinal neural differentiation and visual function in zebrafish. Erratum:[Sci Rep. 2025 Apr 15;15(1):12967. doi: 10.1038/s41598-025-90120-1. PMID: 40234470] Publication Status: Online-Only, [RefSeq, PubMed]; Lhx3 and Lhx4 have roles in suppressing Kolmer-Agduhr interneuron characteristics within zebrafish axial motoneurons, [RefSeq, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 2, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NIC1;E7FB05", "ec_number_list": [], "go_molecular_function": "GO:0008270 zinc ion binding;GO:0000977 RNA polymerase II transcription regulatory region sequence-specific DNA binding;GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006357 regulation of transcription by RNA polymerase II;GO:0021983 pituitary gland development;GO:0030182 neuron differentiation;GO:0021521 ventral spinal cord interneuron specification", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "B0S5S7-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "B0S5W3-1", "uniprot_id": [ { "id": "B0S5W3_DANRE", "url": "https://www.uniprot.org/uniprot/B0S5W3", "type": "external" } ], "mass": 31351.0, "length": 277, "protein_name": "SPRY domain-containing SOCS box protein 4a", "gene_name": "spsb4a", "organism": "Zebrafish", "refseq_name": "SPRY domain-containing SOCS box protein 4a", "refseq_ac": [ { "id": "NP_001243571", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001243571", "type": "external" } ], "gene_names_uniprotkb": "spsb4a; si:dkeyp-90g12.2; spsb4; ssb-4; wu:fb38e11", "gene_names_refseq": "si:dkeyp-90g12.2; spsb4a; spsb4; ssb-4; wu:fb38e11", "protein_names_uniprotkb": "SPRY domain-containing SOCS box protein 4a", "protein_names_refseq": "SPRY domain-containing SOCS box protein 4a; splA/ryanodine receptor domain and SOCS box containing 4", "tax_id": 7955, "disease": "", "pathway": " (dre:557906); (R-DRE-8951664); (R-DRE-983168)", "pathway_count": 3, "publication_count": 3, "publication_id_list": "19184407;19874812;24045113", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: SRR32588722.1911303.1, SRR32588730.14811789.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505382, SAMEA3505388 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000002.1. On Feb 16, 2012 this sequence version replaced XP_686153.2. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]; SSB-1 and -4 transcripts were present in all blastomeres during the early embryonic stages, but the genes differ in their expression pattern. SSB-4 mRNA was located in the region of the primordial germ cells in 24 and 72 hpf embryos, [RefSeq, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NZK5", "ec_number_list": [], "go_molecular_function": "GO:1990756 ubiquitin-like ligase-substrate adaptor activity", "go_cellular_component": "GO:0005829 cytosol;GO:0019005 SCF ubiquitin ligase complex", "go_biological_process": "GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process;GO:0016567 protein ubiquitination", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "B0S5W3-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "B0S5Y3-1", "uniprot_id": [ { "id": "S5A3A_DANRE", "url": "https://www.uniprot.org/uniprot/B0S5Y3", "type": "external" } ], "mass": 48717.0, "length": 448, "protein_name": "Solute carrier family 52, riboflavin transporter, member 3-A", "gene_name": "slc52a3a", "organism": "Zebrafish", "refseq_name": "solute carrier family 52, riboflavin transporter, member 3-A", "refseq_ac": [ { "id": "NP_001035447", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001035447", "type": "external" } ], "gene_names_uniprotkb": "slc52a3a; rft2a; si:dkeyp-53e12.7; zgc:136909", "gene_names_refseq": "RFT2-A; rft2a; slc52a3-1; slc52a3a; slc52a3; zgc:136909", "protein_names_uniprotkb": "Solute carrier family 52, riboflavin transporter, member 3-A; RFT2-A; Riboflavin transporter 2-A", "protein_names_refseq": "riboflavin transporter 2-A; solute carrier family 52 (riboflavin transporter), member 3; solute carrier family 52 member 3; solute carrier family 52, riboflavin transporter, member 3-A; solute carrier family 52, riboflavin transporter, member 3", "tax_id": 7955, "disease": "Brown-Vialetto-Van Laere syndrome (Disease Ontology:DOID:0050694); Fazio-Londe disease (Disease Ontology:DOID:0080632); Brown-Vialetto-Van Laere syndrome 1 (Disease Ontology:DOID:0080785)", "pathway": " (dre:678609); (R-DRE-196843)", "pathway_count": 2, "publication_count": 1, "publication_id_list": "23594743", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC115324.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505372 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC115324.1., [RefSeq]; Plasma membrane transporter mediating the uptake by cells of the water soluble vitamin B2/riboflavin that plays a key role in biochemical oxidation-reduction reactions of the carbohydrate, lipid, and amino acid metabolism., [UniProtKB, UniProtKB]", "predicted_glycosites": 5, "predicted_n_glycosites": 5, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 3, "glyco_site_count": 5, "binding_glycan_count": 0, "secondary_ac_list": "Q1RLR2", "ec_number_list": [], "go_molecular_function": "GO:0032217 riboflavin transmembrane transporter activity", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "GO:0032218 riboflavin transport", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "B0S5Y3-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0000000010000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "B0S618-1", "uniprot_id": [ { "id": "B0S618_DANRE", "url": "https://www.uniprot.org/uniprot/B0S618", "type": "external" } ], "mass": 101617.0, "length": 914, "protein_name": "2.7.11.8; Fas-activated serine/threonine kinase", "gene_name": "fastk", "organism": "Zebrafish", "refseq_name": "fas-activated serine/threonine kinase", "refseq_ac": [ { "id": "NP_001164290", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001164290", "type": "external" } ], "gene_names_uniprotkb": "fastk; si:dkeyp-73d8.3", "gene_names_refseq": "fastk; si:dkeyp-73d8.3", "protein_names_uniprotkb": "2.7.11.8; Fas-activated serine/threonine kinase", "protein_names_refseq": "fas-activated serine/threonine kinase", "tax_id": 7955, "disease": "", "pathway": " (dre:564534)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "15520368;26469318", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GDQH01008973.1, GFIL01010317.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000002.1. On Apr 26, 2010 this sequence version replaced XP_002660880.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NSV6", "ec_number_list": [], "go_molecular_function": "GO:0003723 RNA binding;GO:0033867 Fas-activated serine/threonine kinase activity", "go_cellular_component": "GO:0005759 mitochondrial matrix;GO:0035770 ribonucleoprotein granule", "go_biological_process": "GO:0000963 mitochondrial RNA processing;GO:0044528 regulation of mitochondrial mRNA stability", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "B0S618-1", "record_type": "protein", "filter_code": "0000000.0000101.010000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "B0S682-1", "uniprot_id": [ { "id": "B0S682_DANRE", "url": "https://www.uniprot.org/uniprot/B0S682", "type": "external" } ], "mass": 58152.0, "length": 516, "protein_name": "Interferon regulatory factor 5", "gene_name": "irf5", "organism": "Zebrafish", "refseq_name": "interferon regulatory factor 5", "refseq_ac": [ { "id": "NP_001314746", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001314746", "type": "external" } ], "gene_names_uniprotkb": "irf5; im:7155364; zgc:76986", "gene_names_refseq": "im:7155364; irf5; zgc:76986", "protein_names_uniprotkb": "Interferon regulatory factor 5", "protein_names_refseq": "interferon regulatory factor 5", "tax_id": 7955, "disease": "metabolic dysfunction-associated steatohepatitis (Disease Ontology:DOID:0080547); inflammatory bowel disease 14 (Disease Ontology:DOID:0110895); obstructive jaundice (Disease Ontology:DOID:13603); hepatitis C (Disease Ontology:DOID:1883); multiple sclerosis (Disease Ontology:DOID:2377); liver cirrhosis (Disease Ontology:DOID:5082); ureteral obstruction (Disease Ontology:DOID:5199); pneumonia (Disease Ontology:DOID:552); rheumatoid arthritis (Disease Ontology:DOID:7148); herpes simplex (Disease Ontology:DOID:8566); systemic lupus erythematosus (Disease Ontology:DOID:9074)", "pathway": " (dre:405811); (R-DRE-9860276)", "pathway_count": 2, "publication_count": 10, "publication_id_list": "18039395;19896215;20444275;20637800;24683187;29080685;30517881;32471880;35464458;37752184", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GFIL01013491.1, SRR26395015.1717525.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000004.1. On May 26, 2016 this sequence version replaced XP_005164675.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 11, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0A0R4IKF1;A0A8M1P9C5", "ec_number_list": [], "go_molecular_function": "GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding;GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006357 regulation of transcription by RNA polymerase II;GO:0045944 positive regulation of transcription by RNA polymerase II;GO:0019221 cytokine-mediated signaling pathway;GO:0002376 immune system process", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "B0S682-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "B0S696-1", "uniprot_id": [ { "id": "B0S696_DANRE", "url": "https://www.uniprot.org/uniprot/B0S696", "type": "external" } ], "mass": 95832.0, "length": 863, "protein_name": "TBC1 domain family member 25", "gene_name": "tbc1d25", "organism": "Zebrafish", "refseq_name": "TBC1 domain family member 25", "refseq_ac": [ { "id": "NP_001121708", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001121708", "type": "external" } ], "gene_names_uniprotkb": "tbc1d25; im:7137114; si:dkeyp-22b2.2", "gene_names_refseq": "im:7137114; si:dkeyp-22b2.2; tbc1d25", "protein_names_uniprotkb": "TBC1 domain family member 25", "protein_names_refseq": "TBC1 domain family member 25", "tax_id": 7955, "disease": "", "pathway": " (dre:556338); (R-DRE-8854214)", "pathway_count": 2, "publication_count": 3, "publication_id_list": "26469318;27189481;28024160", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GDQH01022642.1, GFIL01040451.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505372 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000008.1. On Jul 31, 2008 this sequence version replaced XP_684199.3., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NHQ6", "ec_number_list": [], "go_molecular_function": "GO:0005096 GTPase activator activity", "go_cellular_component": "GO:0005776 autophagosome", "go_biological_process": "GO:1901096 regulation of autophagosome maturation", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "B0S696-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "B0S697-1", "uniprot_id": [ { "id": "B0S697_DANRE", "url": "https://www.uniprot.org/uniprot/B0S697", "type": "external" } ], "mass": 48256.0, "length": 437, "protein_name": "Properdin isoform X1; Properdin precursor", "gene_name": "cfp", "organism": "Zebrafish", "refseq_name": "properdin precursor", "refseq_ac": [ { "id": "NP_001153598", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001153598", "type": "external" } ], "gene_names_uniprotkb": "cfp; ch:af064832; si:dkeyp-22b2.3; wu:fj10b08", "gene_names_refseq": "cfp; ch:af064832; si:dkeyp-22b2.3; wu:fj10b08", "protein_names_uniprotkb": "Properdin isoform X1; Properdin precursor", "protein_names_refseq": "properdin precursor; zfp", "tax_id": 7955, "disease": "X-linked properdin deficiency (Disease Ontology:DOID:0111768); factor VIII deficiency (Disease Ontology:DOID:12134)", "pathway": " (dre:556399)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "18638502;23416932;26469318;27189481;32877737;35111746;35241802;38819436", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: SRR32588722.3432260.1, SRR32588718.34823533.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000008.1. On Jul 18, 2025 this sequence version replaced XP_005167098.1. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications., [RefSeq]; Zebrafish properdin is a pattern recognition molecule capable of identifying non-self antigens/structures., [RefSeq, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 2, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NSW8;A0AC58G7C1", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005576 extracellular region", "go_biological_process": "GO:0006955 immune response", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "B0S697-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "B0S6A6-1", "uniprot_id": [ { "id": "B0S6A6_DANRE", "url": "https://www.uniprot.org/uniprot/B0S6A6", "type": "external" } ], "mass": 55852.0, "length": 495, "protein_name": "GDNF family receptor alpha-2", "gene_name": "gfra2a", "organism": "Zebrafish", "refseq_name": "GDNF family receptor alpha-2a", "refseq_ac": [ { "id": "NP_001017996", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001017996", "type": "external" } ], "gene_names_uniprotkb": "gfra2a; gfra2", "gene_names_refseq": "gfra2a; gfra2", "protein_names_uniprotkb": "GDNF family receptor alpha-2; GDNF receptor alpha-2", "protein_names_refseq": "GDNF family receptor alpha-2a; GFR alpha 2; glial cell line derived neurotrophic factor family receptor alpha 2a; glial cell line derived neurotrophic factor family receptor alpha 2", "tax_id": 7955, "disease": "", "pathway": " (dre:405794); (R-DRE-5673001); (R-DRE-8853659)", "pathway_count": 3, "publication_count": 6, "publication_id_list": "14660438;17157029;24218366;26469318;27189481;28252024", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: AY436322.1, GDQH01028822.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000008.1. On Jan 21, 2011 this sequence version replaced XP_001341807.2. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]; Receptor for neurturin (NRTN), a growth factor that supports the survival of sympathetic neurons. NRTN-binding leads to autophosphorylation and activation of the RET receptor. Also able to mediate GDNF signaling through the RET tyrosine kinase receptor., [UniProtKB, UniProtKB]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1N5N5", "ec_number_list": [], "go_molecular_function": "GO:0038023 signaling receptor activity", "go_cellular_component": "GO:0043235 receptor complex;GO:0009897 external side of plasma membrane", "go_biological_process": "GO:0048484 enteric nervous system development;GO:0007169 cell surface receptor protein tyrosine kinase signaling pathway;GO:0007399 nervous system development", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "B0S6A6-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "B0S6B4-1", "uniprot_id": [ { "id": "B0S6B4_DANRE", "url": "https://www.uniprot.org/uniprot/B0S6B4", "type": "external" } ], "mass": 143876.0, "length": 1318, "protein_name": "Microtubule-associated protein 1S", "gene_name": "map1sb", "organism": "Zebrafish", "refseq_name": "microtubule-associated protein 1S", "refseq_ac": [ { "id": "XP_005171384", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005171384", "type": "external" } ], "gene_names_uniprotkb": "map1sb", "gene_names_refseq": "map1sb", "protein_names_uniprotkb": "Microtubule-associated protein 1S", "protein_names_refseq": "microtubule-associated protein 1S", "tax_id": 7955, "disease": "", "pathway": " (dre:565533)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133177) annotated using gene prediction method: Gnomon, supported by mRNA evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M2BIR7;E7F327", "ec_number_list": [], "go_molecular_function": "GO:0003779 actin binding;GO:0008017 microtubule binding", "go_cellular_component": "GO:0005829 cytosol;GO:0005874 microtubule;GO:0030425 dendrite;GO:0043025 neuronal cell body;GO:0045202 synapse", "go_biological_process": "GO:0007409 axonogenesis;GO:0016358 dendrite development;GO:0000226 microtubule cytoskeleton organization;GO:0031114 regulation of microtubule depolymerization", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "B0S6B4-1", "record_type": "protein", "filter_code": "0000000.0000001.010000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "B0S6C1-1", "uniprot_id": [ { "id": "B0S6C1_DANRE", "url": "https://www.uniprot.org/uniprot/B0S6C1", "type": "external" } ], "mass": 31950.0, "length": 279, "protein_name": "Tissue factor pathway inhibitor", "gene_name": "tfpia", "organism": "Zebrafish", "refseq_name": "tissue factor pathway inhibitor a isoform 1 precursor", "refseq_ac": [ { "id": "NP_001296732", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001296732", "type": "external" } ], "gene_names_uniprotkb": "tfpia; TFPI; si:dz44f8.1; tfpib; wu:fb92g01; zgc:152844; zgc:158592", "gene_names_refseq": "TFPI; si:dz44f8.1; tfpia; tfpib; wu:fb92g01; zgc:152844; zgc:158592", "protein_names_uniprotkb": "Tissue factor pathway inhibitor", "protein_names_refseq": "coagulation inhibitor; lipoprotein-associated; tissue factor pathway inhibitor a isoform 1 precursor; tissue factor pathway inhibitor b", "tax_id": 7955, "disease": "idiopathic pulmonary fibrosis (Disease Ontology:DOID:0050156); B-lymphoblastic leukemia/lymphoma (Disease Ontology:DOID:0080630); graft-versus-host disease (Disease Ontology:DOID:0081267); preterm premature rupture of the membranes (Disease Ontology:DOID:0111144); osteonecrosis (Disease Ontology:DOID:10159); pre-eclampsia (Disease Ontology:DOID:10591); thrombotic thrombocytopenic purpura (Disease Ontology:DOID:10772); disseminated intravascular coagulation (Disease Ontology:DOID:11247); familial hyperlipidemia (Disease Ontology:DOID:1168); nephrotic syndrome (Disease Ontology:DOID:1184); factor VIII deficiency (Disease Ontology:DOID:12134); leukemia (Disease Ontology:DOID:1240); toxic shock syndrome (Disease Ontology:DOID:14115); disease of cellular proliferation (Disease Ontology:DOID:14566); factor V deficiency (Disease Ontology:DOID:2216); transient cerebral ischemia (Disease Ontology:DOID:224); protein S deficiency (Disease Ontology:DOID:2451); pulmonary fibrosis (Disease Ontology:DOID:3770); liver cirrhosis (Disease Ontology:DOID:5082); ovarian hyperstimulation syndrome (Disease Ontology:DOID:5425); myocardial infarction (Disease Ontology:DOID:5844); systemic lupus erythematosus (Disease Ontology:DOID:9074); diabetes mellitus (Disease Ontology:DOID:9351)", "pathway": " (dre:359833)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "24608635;24815885;26469318;28599080;28877957;28934490;31887585;34315984;34918310", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC124151.1, GDQH01001691.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505371, SAMEA3505377 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000009.1. On Jun 12, 2015 this sequence version replaced XP_005167931.1. Transcript Variant: This variant (1) represents the longer transcript and encodes the longer isoform (1). Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications., [RefSeq]; Knockdown and Knockout of Tissue Factor Pathway Inhibitor in Zebrafish., [RefSeq, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 23, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1P282", "ec_number_list": [], "go_molecular_function": "GO:0004867 serine-type endopeptidase inhibitor activity", "go_cellular_component": "GO:0005615 extracellular space;GO:0005576 extracellular region", "go_biological_process": "GO:0007596 blood coagulation", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "B0S6C1-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "B0S6C5-1", "uniprot_id": [ { "id": "RTSTL_DANRE", "url": "https://www.uniprot.org/uniprot/B0S6C5", "type": "external" } ], "mass": 67930.0, "length": 604, "protein_name": "Inactive all-trans-retinol 13,14-reductase", "gene_name": "retsatl", "organism": "Zebrafish", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "retsatl; retsatb", "gene_names_refseq": "", "protein_names_uniprotkb": "Inactive all-trans-retinol 13,14-reductase; Inactive all-trans-13,14-dihydroretinol saturase B; RetSat B; Retinol saturase (all-trans-retinol 13,14-reductase)-like protein", "protein_names_refseq": "", "tax_id": 7955, "disease": "", "pathway": "", "pathway_count": 0, "publication_count": 2, "publication_id_list": "17253779;23594743", "class_list": "", "function": "", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0016491 oxidoreductase activity", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "B0S6C5-1", "record_type": "protein", "filter_code": "0000000.0000100.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "B0S6H6-1", "uniprot_id": [ { "id": "B0S6H6_DANRE", "url": "https://www.uniprot.org/uniprot/B0S6H6", "type": "external" } ], "mass": 32834.0, "length": 297, "protein_name": "Synaptophysin b", "gene_name": "sypb", "organism": "Zebrafish", "refseq_name": "synaptophysin b", "refseq_ac": [ { "id": "NP_001025413", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001025413", "type": "external" } ], "gene_names_uniprotkb": "sypb; zgc:136469; zgc:92837", "gene_names_refseq": "sypb; zgc:136469; zgc:92837", "protein_names_uniprotkb": "Synaptophysin b", "protein_names_refseq": "synaptophysin b", "tax_id": 7955, "disease": "non-syndromic X-linked intellectual disability 96 (Disease Ontology:DOID:0112035); Alzheimer's disease (Disease Ontology:DOID:10652); alcohol use disorder (Disease Ontology:DOID:1574)", "pathway": " (dre:436774)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "16571769;19898484;20920793;23083735;23508811;34269177;34470805;35373736;35877057;36613611", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GDQH01031586.1, BC115145.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000008.1 and EH443085.1. On or before Jan 22, 2009 this sequence version replaced NP_001002501.1, NP_001025413.1. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 3, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1N7L1;F1RDG3", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0048786 presynaptic active zone;GO:0030672 synaptic vesicle membrane", "go_biological_process": "GO:0021782 glial cell development;GO:0060041 retina development in camera-type eye", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "B0S6H6-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "B0S6L8-1", "uniprot_id": [ { "id": "B0S6L8_DANRE", "url": "https://www.uniprot.org/uniprot/B0S6L8", "type": "external" } ], "mass": 22292.0, "length": 193, "protein_name": "Proton-transporting V-type ATPase complex assembly regulator TMEM9 isoform 1 precursor", "gene_name": "tmem9", "organism": "Zebrafish", "refseq_name": "proton-transporting V-type ATPase complex assembly regulator TMEM9 isoform 1 precursor", "refseq_ac": [ { "id": "NP_956160", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_956160", "type": "external" } ], "gene_names_uniprotkb": "tmem9; fi33g11; wu:fi33g11; zgc:55432", "gene_names_refseq": "fi33g11; tmem9; wu:fi33g11; zgc:55432", "protein_names_uniprotkb": "Proton-transporting V-type ATPase complex assembly regulator TMEM9 isoform 1 precursor", "protein_names_refseq": "proton-transporting V-type ATPase complex assembly regulator TMEM9 isoform 1 precursor", "tax_id": 7955, "disease": "", "pathway": "", "pathway_count": 0, "publication_count": 2, "publication_id_list": "26469318;27189481", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GDQH01012394.1, GDQQ01010304.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000008.1 and EH445611.1. On Jun 17, 2016 this sequence version replaced NP_956160.1. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1PG15", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005765 lysosomal membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "B0S6L8-1", "record_type": "protein", "filter_code": "0000000.0000100.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "B0S6M3-1", "uniprot_id": [ { "id": "B0S6M3_DANRE", "url": "https://www.uniprot.org/uniprot/B0S6M3", "type": "external" } ], "mass": 21479.0, "length": 175, "protein_name": "Crystallin, gamma M2d1", "gene_name": "crygm2d1", "organism": "Zebrafish", "refseq_name": "crystallin, gamma M2d1", "refseq_ac": [ { "id": "NP_001018517", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001018517", "type": "external" } ], "gene_names_uniprotkb": "crygm2d1; crygEM2-1; zgc:109890; zgc:112327; zgc:173493", "gene_names_refseq": "crygEM2-1; crygm2d1; zgc:109890; zgc:112327; zgc:173493", "protein_names_uniprotkb": "Crystallin, gamma M2d1", "protein_names_refseq": "Gamma crystallin M2; crystallin gamma EM2-1; crystallin, gamma M2d1", "tax_id": 7955, "disease": "", "pathway": " (dre:553710)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "16728471;18449354;19936306;23412571;23716667;29751158;32170011;33705730;34016526;37487085", "class_list": "", "function": "Crystallins are the dominant structural components of the vertebrate eye lens., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1N6C0", "ec_number_list": [], "go_molecular_function": "GO:0005212 structural constituent of eye lens", "go_cellular_component": "", "go_biological_process": "GO:0007601 visual perception;GO:0002088 lens development in camera-type eye", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "B0S6M3-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "B0S6P9-1", "uniprot_id": [ { "id": "B0S6P9_DANRE", "url": "https://www.uniprot.org/uniprot/B0S6P9", "type": "external" } ], "mass": 41592.0, "length": 359, "protein_name": "Probable G-protein coupled receptor 34", "gene_name": "gpr34b", "organism": "Zebrafish", "refseq_name": "probable G-protein coupled receptor 34b", "refseq_ac": [ { "id": "NP_001122018", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001122018", "type": "external" } ], "gene_names_uniprotkb": "gpr34b; zgc:110315", "gene_names_refseq": "gpr34b; zgc:110315", "protein_names_uniprotkb": "Probable G-protein coupled receptor 34", "protein_names_refseq": "probable G-protein coupled receptor 34b", "tax_id": 7955, "disease": "", "pathway": " (dre:791765)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "12835326;36122226", "class_list": "", "function": "##Evidence-Data-START## Transcript is intronless :: BC092867.1, SRR26395015.1613952.1 [ECO:0000345] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000009.1. On or before Jun 3, 2009 this sequence version replaced NP_001007217.2, XP_001330993.1., [RefSeq]; G-protein-coupled receptor of lysophosphatidylserine (LysoPS) that plays different roles in immune response. Acts a damage-sensing receptor that triggers tissue repair upon recognition of dying neutrophils. Mechanistically, apoptotic neutrophils release lysophosphatydilserine that are recognized by type 3 innate lymphoid cells (ILC3s) via GPR34, which activates downstream PI3K-AKT and RAS-ERK signaling pathways leading to STAT3 activation and IL-22 production. Plays an important role in microglial function, controlling morphology and phagocytosis., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NHP0", "ec_number_list": [], "go_molecular_function": "GO:0004930 G protein-coupled receptor activity;GO:0045028 G protein-coupled purinergic nucleotide receptor activity", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "GO:0007186 G protein-coupled receptor signaling pathway", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "B0S6P9-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "B0S6Q0-1", "uniprot_id": [ { "id": "B0S6Q0_DANRE", "url": "https://www.uniprot.org/uniprot/B0S6Q0", "type": "external" } ], "mass": 41204.0, "length": 361, "protein_name": "Cysteinyl leukotriene receptor 2", "gene_name": "si:dkey-216e24.9", "organism": "Zebrafish", "refseq_name": "cysteinyl leukotriene receptor 2", "refseq_ac": [ { "id": "XP_017213322", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_017213322", "type": "external" } ], "gene_names_uniprotkb": "si:dkey-216e24.9", "gene_names_refseq": "si:dkey-216e24.9", "protein_names_uniprotkb": "Cysteinyl leukotriene receptor 2", "protein_names_refseq": "cysteinyl leukotriene receptor 2", "tax_id": 7955, "disease": "", "pathway": " (dre:101883564)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133184) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M6Z0I0", "ec_number_list": [], "go_molecular_function": "GO:0004930 G protein-coupled receptor activity;GO:0038023 signaling receptor activity", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "GO:0007186 G protein-coupled receptor signaling pathway", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "B0S6Q0-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "B0S6Y8-1", "uniprot_id": [ { "id": "B0S6Y8_DANRE", "url": "https://www.uniprot.org/uniprot/B0S6Y8", "type": "external" } ], "mass": 41695.0, "length": 379, "protein_name": "Tomoregulin-2a", "gene_name": "tmeff2a", "organism": "Zebrafish", "refseq_name": "tomoregulin-2a", "refseq_ac": [ { "id": "NP_001121837", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001121837", "type": "external" } ], "gene_names_uniprotkb": "tmeff2a; si:dkey-9g20.2; tmeff2", "gene_names_refseq": "si:dkey-9g20.2; tmeff2a; tmeff2", "protein_names_uniprotkb": "Tomoregulin-2a", "protein_names_refseq": "tomoregulin-2a; transmembrane protein with EGF-like and two follistatin-like domains 2", "tax_id": 7955, "disease": "prostate cancer (Disease Ontology:DOID:10283); urinary bladder cancer (Disease Ontology:DOID:11054)", "pathway": " (dre:100004613)", "pathway_count": 1, "publication_count": 3, "publication_id_list": "26469318;28252024;28256502", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GDQH01022074.1, GFIL01040940.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505373, SAMEA3505375 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000009.1. On Jul 31, 2008 this sequence version replaced XP_001342030.2., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 2, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NHF9", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005576 extracellular region;GO:0016020 membrane", "go_biological_process": "GO:0030154 cell differentiation;GO:0006950 response to stress", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "B0S6Y8-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "B0S6Z8-1", "uniprot_id": [ { "id": "B0S6Z8_DANRE", "url": "https://www.uniprot.org/uniprot/B0S6Z8", "type": "external" } ], "mass": 54159.0, "length": 487, "protein_name": "Phosphatidylinositol N-acetylglucosaminyltransferase subunit A", "gene_name": "piga", "organism": "Zebrafish", "refseq_name": "phosphatidylinositol N-acetylglucosaminyltransferase subunit A", "refseq_ac": [ { "id": "NP_001119918", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001119918", "type": "external" } ], "gene_names_uniprotkb": "piga; im:6911675; zgc:56589", "gene_names_refseq": "im:6911675; piga; zgc:56589", "protein_names_uniprotkb": "Phosphatidylinositol N-acetylglucosaminyltransferase subunit A; 2.4.1.198; GlcNAc-PI synthesis protein; Phosphatidylinositol-glycan biosynthesis class A protein", "protein_names_refseq": "phosphatidylinositol N-acetylglucosaminyltransferase subunit A", "tax_id": 7955, "disease": "paroxysmal nocturnal hemoglobinuria (Disease Ontology:DOID:0060284); autosomal recessive congenital ichthyosis 4B (Disease Ontology:DOID:0060713); multiple congenital anomalies-hypotonia-seizures syndrome 2 (Disease Ontology:DOID:0080139)", "pathway": " (dre:791759)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "26469318;34735227", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC049334.1, SRR32588723.3408092.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000009.1. On or before Apr 11, 2009 this sequence version replaced NP_957241.1, XP_001331595.1., [RefSeq]; Catalytic subunit of the glycosylphosphatidylinositol-N-acetylglucosaminyltransferase (GPI-GnT) complex that catalyzes the transfer of N-acetylglucosamine from UDP-N-acetylglucosamine to phosphatidylinositol and participates in the first step of GPI biosynthesis., [UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 3, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NJC4;A0AC58GF62", "ec_number_list": [ { "id": "2.4.1.198", "url": "https://www.rhea-db.org/rhea/?query=ec:2.4.1.198", "type": "external" } ], "go_molecular_function": "GO:0016757 glycosyltransferase activity;GO:0017176 phosphatidylinositol N-acetylglucosaminyltransferase activity", "go_cellular_component": "GO:0000506 glycosylphosphatidylinositol-N-acetylglucosaminyltransferase (GPI-GnT) complex", "go_biological_process": "GO:0006506 GPI anchor biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "B0S6Z8-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "B0S768-1", "uniprot_id": [ { "id": "B0S768_DANRE", "url": "https://www.uniprot.org/uniprot/B0S768", "type": "external" } ], "mass": 106673.0, "length": 946, "protein_name": "2.4.2.30; M-phase phosphoprotein 8", "gene_name": "mphosph8", "organism": "Zebrafish", "refseq_name": "M-phase phosphoprotein 8", "refseq_ac": [ { "id": "NP_001119905", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001119905", "type": "external" } ], "gene_names_uniprotkb": "mphosph8; fc38d04; im:7151391; wu:fc38d04; zgc:162345", "gene_names_refseq": "fc38d04; im:7151391; mphosph8; wu:fc38d04; zgc:162345", "protein_names_uniprotkb": "2.4.2.30; M-phase phosphoprotein 8", "protein_names_refseq": "M-phase phosphoprotein 8", "tax_id": 7955, "disease": "", "pathway": " (dre:504061)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "15520368;24240475;27189481;27192554", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GFIL01026681.1, GDQH01002889.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000009.1. On May 28, 2009 this sequence version replaced NP_001082829.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NJE7;E7FG83", "ec_number_list": [], "go_molecular_function": "GO:0003950 NAD+ poly-ADP-ribosyltransferase activity", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "B0S768-1", "record_type": "protein", "filter_code": "0000000.0000101.010000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "B0S776-1", "uniprot_id": [ { "id": "B0S776_DANRE", "url": "https://www.uniprot.org/uniprot/B0S776", "type": "external" } ], "mass": 57672.0, "length": 514, "protein_name": "Cysteine/serine-rich nuclear protein 1", "gene_name": "csrnp1a", "organism": "Zebrafish", "refseq_name": "cysteine/serine-rich nuclear protein 1", "refseq_ac": [ { "id": "XP_688758", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_688758", "type": "external" } ], "gene_names_uniprotkb": "csrnp1a", "gene_names_refseq": "csrnp1a", "protein_names_uniprotkb": "Cysteine/serine-rich nuclear protein 1", "protein_names_refseq": "cysteine/serine-rich nuclear protein 1", "tax_id": 7955, "disease": "", "pathway": " (dre:560270)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133177) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Mar 30, 2010 this sequence version replaced XP_688758.2. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8N7TEV8", "ec_number_list": [], "go_molecular_function": "GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific;GO:0043565 sequence-specific DNA binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006357 regulation of transcription by RNA polymerase II;GO:0006915 apoptotic process;GO:0060215 primitive hemopoiesis", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "B0S776-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "B0S7B6-1", "uniprot_id": [ { "id": "B0S7B6_DANRE", "url": "https://www.uniprot.org/uniprot/B0S7B6", "type": "external" } ], "mass": 99078.0, "length": 882, "protein_name": "SLIT and NTRK-like protein 3", "gene_name": "slitrk3b", "organism": "Zebrafish", "refseq_name": "SLIT and NTRK-like family, member 3b precursor", "refseq_ac": [ { "id": "NP_001428713", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001428713", "type": "external" } ], "gene_names_uniprotkb": "slitrk3b; LOC137488017", "gene_names_refseq": "si:dkey-116g14.1; slitrk3b", "protein_names_uniprotkb": "SLIT and NTRK-like protein 3", "protein_names_refseq": "SLIT and NTRK-like family, member 3b precursor; SLIT and NTRK-like protein 3", "tax_id": 7955, "disease": "", "pathway": " (dre:137488017)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GFIL01038944.1, SRR32588730.19211259.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000002.1. On Jul 2, 2025 this sequence version replaced XP_001346135.2., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1Q2C7;A0AC58HPQ6;F1R051", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0098982 GABA-ergic synapse;GO:0098839 postsynaptic density membrane", "go_biological_process": "GO:0007409 axonogenesis;GO:0051965 positive regulation of synapse assembly", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "B0S7B6-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "B0S7C8-1", "uniprot_id": [ { "id": "B0S7C8_DANRE", "url": "https://www.uniprot.org/uniprot/B0S7C8", "type": "external" } ], "mass": 36780.0, "length": 340, "protein_name": "Paired box protein Pax-1 isoform X1", "gene_name": "pax1b", "organism": "Zebrafish", "refseq_name": "paired box protein Pax-1 isoform X1", "refseq_ac": [ { "id": "XP_700877", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_700877", "type": "external" } ], "gene_names_uniprotkb": "pax1b", "gene_names_refseq": "pax1b", "protein_names_uniprotkb": "Paired box protein Pax-1 isoform X1", "protein_names_refseq": "paired box protein Pax-1 isoform X1", "tax_id": 7955, "disease": "branchiootorenal syndrome (Disease Ontology:DOID:14702)", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133195) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Aug 1, 2013 this sequence version replaced XP_700877.5. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8N7TFV9", "ec_number_list": [], "go_molecular_function": "GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding;GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:1904888 cranial skeletal system development;GO:0009792 embryo development ending in birth or egg hatching;GO:0006351 DNA-templated transcription;GO:0006357 regulation of transcription by RNA polymerase II;GO:0001501 skeletal system development", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "B0S7C8-1", "record_type": "protein", "filter_code": "0000000.0000010.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "B0S7E1-1", "uniprot_id": [ { "id": "B0S7E1_DANRE", "url": "https://www.uniprot.org/uniprot/B0S7E1", "type": "external" } ], "mass": 69725.0, "length": 628, "protein_name": "Bromodomain-containing protein 7", "gene_name": "brd7", "organism": "Zebrafish", "refseq_name": "bromodomain-containing protein 7", "refseq_ac": [ { "id": "NP_998531", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_998531", "type": "external" } ], "gene_names_uniprotkb": "brd7; wu:fc95f02; zgc:66347", "gene_names_refseq": "brd7; wu:fc95f02; zgc:66347", "protein_names_uniprotkb": "Bromodomain-containing protein 7", "protein_names_refseq": "bromodomain-containing protein 7", "tax_id": 7955, "disease": "colorectal carcinoma (Disease Ontology:DOID:0080199); ovary epithelial cancer (Disease Ontology:DOID:2152); glioblastoma (Disease Ontology:DOID:3068); malignant astrocytoma (Disease Ontology:DOID:3069); high grade glioma (Disease Ontology:DOID:3070); lung non-small cell carcinoma (Disease Ontology:DOID:3908); acute myeloid leukemia (Disease Ontology:DOID:9119)", "pathway": " (dre:406675)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "15133664;15520368;24240475;26469318;34315984", "class_list": "", "function": "##Evidence-Data-START## RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from BX664719.14, CT677812.2, EE319656.1, EE705481.1, CT653052.1 and CD605004.1. On Nov 14, 2008 this sequence version replaced NP_998531.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 7, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1PF17", "ec_number_list": [], "go_molecular_function": "GO:0140566 histone reader activity", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006357 regulation of transcription by RNA polymerase II", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "B0S7E1-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "B0S7K8-1", "uniprot_id": [ { "id": "B0S7K8_DANRE", "url": "https://www.uniprot.org/uniprot/B0S7K8", "type": "external" } ], "mass": 58241.0, "length": 532, "protein_name": "Coilin", "gene_name": "coil", "organism": "Zebrafish", "refseq_name": "coilin", "refseq_ac": [ { "id": "NP_571587", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_571587", "type": "external" } ], "gene_names_uniprotkb": "coil; CLN80; wu:fb08h11", "gene_names_refseq": "CLN80; coil; wu:fb08h11", "protein_names_uniprotkb": "Coilin", "protein_names_refseq": "coilin", "tax_id": 7955, "disease": "", "pathway": " (dre:58024)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "10806077;11116086;16109975;20357773;21327108;22878415;26469318;27903883", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GDQH01019846.1, BC045858.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000003.1, EH571151.1, EH566753.1 and EH612845.1. On Sep 1, 2015 this sequence version replaced NP_571587.1. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1P873;F1QCT9", "ec_number_list": [], "go_molecular_function": "GO:0030620 U2 snRNA binding;GO:0030619 U1 snRNA binding", "go_cellular_component": "GO:0015030 Cajal body", "go_biological_process": "GO:0000387 spliceosomal snRNP assembly;GO:0030576 Cajal body organization", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "B0S7K8-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "B0S8H2-1", "uniprot_id": [ { "id": "B0S8H2_DANRE", "url": "https://www.uniprot.org/uniprot/B0S8H2", "type": "external" } ], "mass": 110643.0, "length": 1043, "protein_name": "3.2.1.3; Histone deacetylase complex subunit SAP130b", "gene_name": "sap130b", "organism": "Zebrafish", "refseq_name": "histone deacetylase complex subunit SAP130b", "refseq_ac": [ { "id": "NP_001243552", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001243552", "type": "external" } ], "gene_names_uniprotkb": "sap130b; si:dkey-5i22.5; wu:fj36c08", "gene_names_refseq": "sap130b; si:dkey-5i22.5; wu:fj36c08", "protein_names_uniprotkb": "3.2.1.3; Histone deacetylase complex subunit SAP130b", "protein_names_refseq": "Sin3A-associated protein b; histone deacetylase complex subunit SAP130b", "tax_id": 7955, "disease": "congenital heart disease (Disease Ontology:DOID:1682); hypoplastic left heart syndrome (Disease Ontology:DOID:9955)", "pathway": " (dre:335897)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "15520368;25533962;26469318;37711853", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GDQH01014354.1, GFIL01034418.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000002.1. On Feb 15, 2012 this sequence version replaced XP_002660848.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]", "predicted_glycosites": 3, "predicted_n_glycosites": 0, "predicted_o_glycosites": 3, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 2, "glyco_site_count": 3, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NZ09", "ec_number_list": [], "go_molecular_function": "GO:0004339 glucan 1,4-alpha-glucosidase activity", "go_cellular_component": "GO:0070822 Sin3-type complex", "go_biological_process": "GO:0021508 floor plate formation;GO:0000122 negative regulation of transcription by RNA polymerase II;GO:0006351 DNA-templated transcription;GO:0001966 thigmotaxis;GO:0008345 larval locomotory behavior", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "B0S8H2-1", "record_type": "protein", "filter_code": "0000000.0000111.010000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "B0S8I0-1", "uniprot_id": [ { "id": "GTPB8_DANRE", "url": "https://www.uniprot.org/uniprot/B0S8I0", "type": "external" } ], "mass": 32294.0, "length": 286, "protein_name": "GTP-binding protein 8", "gene_name": "gtpbp8", "organism": "Zebrafish", "refseq_name": "GTP-binding protein 8", "refseq_ac": [ { "id": "NP_001119874", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001119874", "type": "external" } ], "gene_names_uniprotkb": "gtpbp8; si:rp71-84d19.3", "gene_names_refseq": "gtpbp8; si:rp71-84d19.3", "protein_names_uniprotkb": "GTP-binding protein 8", "protein_names_refseq": "GTP binding protein 8 (putative); GTP-binding protein 8", "tax_id": 7955, "disease": "", "pathway": " (dre:561913)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "23594743", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GDQH01026176.1, GFIL01038052.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505372 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000009.1. On Jul 31, 2008 this sequence version replaced XP_690407.2., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0005525 GTP binding;GO:0046872 metal ion binding", "go_cellular_component": "GO:0005739 mitochondrion", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "B0S8I0-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "B0S8J8-1", "uniprot_id": [ { "id": "B0S8J8_DANRE", "url": "https://www.uniprot.org/uniprot/B0S8J8", "type": "external" } ], "mass": 52654.0, "length": 465, "protein_name": "Rho GTPase-activating protein 15", "gene_name": "arhgap15", "organism": "Zebrafish", "refseq_name": "rho GTPase-activating protein 15", "refseq_ac": [ { "id": "NP_001122027", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001122027", "type": "external" } ], "gene_names_uniprotkb": "arhgap15; si:ch211-69n2.2", "gene_names_refseq": "arhgap15; si:ch211-69n2.2", "protein_names_uniprotkb": "Rho GTPase-activating protein 15; ArhGAP15; Rho-type GTPase-activating protein 15", "protein_names_refseq": "rho GTPase-activating protein 15", "tax_id": 7955, "disease": "", "pathway": " (dre:100003547); (R-DRE-9013149); (R-DRE-9013423)", "pathway_count": 3, "publication_count": 2, "publication_id_list": "24926785;26469318", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: SRR32588729.34038077.1, SRR32588718.19118262.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505372 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000009.1. On Jul 31, 2008 this sequence version replaced XP_001343082.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M3B5J9", "ec_number_list": [], "go_molecular_function": "GO:0005096 GTPase activator activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005886 plasma membrane", "go_biological_process": "GO:0007264 small GTPase-mediated signal transduction", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "B0S8J8-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "B0UXE8-1", "uniprot_id": [ { "id": "B0UXE8_DANRE", "url": "https://www.uniprot.org/uniprot/B0UXE8", "type": "external" } ], "mass": 44752.0, "length": 387, "protein_name": "Hexosyltransferase", "gene_name": "b3gnt3.2", "organism": "Zebrafish", "refseq_name": "N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 3.2 precursor", "refseq_ac": [ { "id": "NP_001122024", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001122024", "type": "external" } ], "gene_names_uniprotkb": "b3gnt3.2; si:ch211-126g16.10", "gene_names_refseq": "b3gnt3.2; si:ch211-126g16.10", "protein_names_uniprotkb": "Hexosyltransferase; 2.4.1.-", "protein_names_refseq": "N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 3.2 precursor", "tax_id": 7955, "disease": "", "pathway": " (dre:100002020); (R-DRE-2022854); (R-DRE-913709)", "pathway_count": 3, "publication_count": 1, "publication_id_list": "21873635", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: SRR32588722.420463.1, SRR32588730.10777932.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA708836 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000008.1. On Jul 31, 2008 this sequence version replaced XP_001341902.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NHP2;A0AC58G5N1", "ec_number_list": [ { "id": "2.4.1.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.4.1.-", "type": "external" }, { "id": "2.4.1.206", "url": "https://www.rhea-db.org/rhea/?query=ec:2.4.1.206", "type": "external" } ], "go_molecular_function": "GO:0008194 UDP-glycosyltransferase activity;GO:0008499 N-acetyl-beta-D-glucosaminide beta-(1,3)-galactosyltransferase activity", "go_cellular_component": "GO:0000139 Golgi membrane", "go_biological_process": "GO:0016266 protein O-linked glycosylation via N-acetyl-galactosamine;GO:0030311 poly-N-acetyllactosamine biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "B0UXE8-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "B0UXH0-1", "uniprot_id": [ { "id": "B0UXH0_DANRE", "url": "https://www.uniprot.org/uniprot/B0UXH0", "type": "external" } ], "mass": 24366.0, "length": 216, "protein_name": "Charged multivesicular body protein 2Ba", "gene_name": "chmp2ba", "organism": "Zebrafish", "refseq_name": "charged multivesicular body protein 2Ba", "refseq_ac": [ { "id": "NP_001116769", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001116769", "type": "external" } ], "gene_names_uniprotkb": "chmp2ba; si:ch211-224m9.5", "gene_names_refseq": "chmp2ba; si:ch211-224m9.5", "protein_names_uniprotkb": "Charged multivesicular body protein 2Ba", "protein_names_refseq": "charged multivesicular body protein 2Ba; chmp2b; chromatin modifying protein 2Ba", "tax_id": 7955, "disease": "frontotemporal dementia and/or amyotrophic lateral sclerosis 7 (Disease Ontology:DOID:0111227); amyotrophic lateral sclerosis (Disease Ontology:DOID:332); frontotemporal dementia (Disease Ontology:DOID:9255)", "pathway": " (dre:569532); (R-DRE-1632852); (R-DRE-917729); (R-DRE-9668328)", "pathway_count": 4, "publication_count": 4, "publication_id_list": "16466575;28252024;30165106;33159045", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GFIL01003941.1, GDQH01025901.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505381, SAMEA3505389 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000009.1. On Apr 11, 2008 this sequence version replaced XP_698020.2., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 3, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8N1TQY2", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0000815 ESCRT III complex;GO:0005771 multivesicular body", "go_biological_process": "GO:0015031 protein transport;GO:0045324 late endosome to vacuole transport;GO:0032509 endosome transport via multivesicular body sorting pathway", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "B0UXH0-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "B0UXH6-1", "uniprot_id": [ { "id": "RGPS1_DANRE", "url": "https://www.uniprot.org/uniprot/B0UXH6", "type": "external" } ], "mass": 66038.0, "length": 581, "protein_name": "Ras-specific guanine nucleotide-releasing factor RalGPS1", "gene_name": "ralgps1", "organism": "Zebrafish", "refseq_name": "ras-specific guanine nucleotide-releasing factor RalGPS1", "refseq_ac": [ { "id": "NP_001093616", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001093616", "type": "external" } ], "gene_names_uniprotkb": "ralgps1; si:dkey-191c17.1; zgc:165535", "gene_names_refseq": "ralgps1; si:dkey-191c17.1; zgc:165535", "protein_names_uniprotkb": "Ras-specific guanine nucleotide-releasing factor RalGPS1; Ral GEF with PH domain and SH3-binding motif 1; RalA exchange factor RalGPS1", "protein_names_refseq": "ral GEF with PH domain and SH3-binding motif 1; ralA exchange factor RalGPS1; ras-specific guanine nucleotide-releasing factor RalGPS1", "tax_id": 7955, "disease": "", "pathway": " (dre:100101642)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "23594743", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC146736.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC146736.1. On May 19, 2009 this sequence version replaced NP_001116763.1., [RefSeq]; Guanine nucleotide exchange factor. May be involved in cytoskeletal organization., [UniProtKB]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A6H8S8", "ec_number_list": [], "go_molecular_function": "GO:0005085 guanyl-nucleotide exchange factor activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005886 plasma membrane", "go_biological_process": "GO:0032485 regulation of Ral protein signal transduction;GO:0007264 small GTPase-mediated signal transduction", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "B0UXH6-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "B0UXI2-1", "uniprot_id": [ { "id": "B0UXI2_DANRE", "url": "https://www.uniprot.org/uniprot/B0UXI2", "type": "external" } ], "mass": 40517.0, "length": 369, "protein_name": "Forkhead box protein D2", "gene_name": "foxd2", "organism": "Zebrafish", "refseq_name": "forkhead box protein D2", "refseq_ac": [ { "id": "NP_571346", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_571346", "type": "external" } ], "gene_names_uniprotkb": "foxd2; fkd9; forkhead-9; foxd1", "gene_names_refseq": "fkd9; forkhead-9; foxd1; foxd2", "protein_names_uniprotkb": "Forkhead box protein D2", "protein_names_refseq": "fork head domain protein 9; forkhead box D1; forkhead box protein D2", "tax_id": 7955, "disease": "", "pathway": " (dre:30525)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "10702024;16888327;17598915;19823566;26469318;29777011;31917260;32493965;33945241;9683740", "class_list": "", "function": "##Evidence-Data-START## Transcript is intronless :: BC075922.1, GDQQ01004201.1 [ECO:0000345] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000008.1. On Jul 22, 2010 this sequence version replaced NP_571346.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1PB08", "ec_number_list": [], "go_molecular_function": "GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding;GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006357 regulation of transcription by RNA polymerase II;GO:0030154 cell differentiation;GO:0009888 tissue development;GO:0009653 anatomical structure morphogenesis", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "B0UXI2-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "B0UXR0-1", "uniprot_id": [ { "id": "GP83B_DANRE", "url": "https://www.uniprot.org/uniprot/B0UXR0", "type": "external" } ], "mass": 40837.0, "length": 366, "protein_name": "G protein-coupled receptor 183-B", "gene_name": "gpr183b", "organism": "Zebrafish", "refseq_name": "G-protein coupled receptor 183-B", "refseq_ac": [ { "id": "NP_001124284", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001124284", "type": "external" } ], "gene_names_uniprotkb": "gpr183b; si:dkey-22o12.5", "gene_names_refseq": "gpr183b; si:dkey-22o12.5", "protein_names_uniprotkb": "G protein-coupled receptor 183-B", "protein_names_refseq": "G-protein coupled receptor 183-B", "tax_id": 7955, "disease": "", "pathway": " (dre:100150688)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "23594743", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GDQH01029708.1, CD283904.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505376, SAMEA4476729 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000001.1. On Aug 6, 2008 this sequence version replaced XP_001921610.1., [RefSeq]; Probable receptor for oxysterols that plays a central role during humoral immunity. Promotes activated B-cell localization in the outer follicle and interfollicular regions (By similarity)., [UniProtKB]", "predicted_glycosites": 1, "predicted_n_glycosites": 1, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0008142 oxysterol binding;GO:0004930 G protein-coupled receptor activity", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "GO:0002250 adaptive immune response", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "B0UXR0-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000010000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "B0UXR7-1", "uniprot_id": [ { "id": "B0UXR7_DANRE", "url": "https://www.uniprot.org/uniprot/B0UXR7", "type": "external" } ], "mass": 72836.0, "length": 645, "protein_name": "Olfactomedin-like protein 2A precursor", "gene_name": "olfml2a", "organism": "Zebrafish", "refseq_name": "olfactomedin-like protein 2A precursor", "refseq_ac": [ { "id": "NP_001119944", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001119944", "type": "external" } ], "gene_names_uniprotkb": "olfml2a; si:ch211-15b7.4", "gene_names_refseq": "olfml2a; si:ch211-15b7.4", "protein_names_uniprotkb": "Olfactomedin-like protein 2A precursor", "protein_names_refseq": "olfactomedin-like protein 2A precursor", "tax_id": 7955, "disease": "", "pathway": " (dre:100002223)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "26469318;27189481", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GDQH01025888.1, GFIL01029106.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA4476733, SAMEA4476736 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000008.1. On Jul 31, 2008 this sequence version replaced XP_001920313.1., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NGU7", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005615 extracellular space", "go_biological_process": "GO:0007165 signal transduction", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "B0UXR7-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "B0UXS1-1", "uniprot_id": [ { "id": "FXRD2_DANRE", "url": "https://www.uniprot.org/uniprot/B0UXS1", "type": "external" } ], "mass": 78132.0, "length": 687, "protein_name": "FAD-dependent oxidoreductase domain-containing protein 2", "gene_name": "foxred2", "organism": "Zebrafish", "refseq_name": "FAD-dependent oxidoreductase domain-containing protein 2 precursor", "refseq_ac": [ { "id": "NP_001070128", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001070128", "type": "external" } ], "gene_names_uniprotkb": "foxred2; si:dkeyp-69e1.5; zgc:153216", "gene_names_refseq": "foxred2; zgc:153216", "protein_names_uniprotkb": "FAD-dependent oxidoreductase domain-containing protein 2", "protein_names_refseq": "FAD-dependent oxidoreductase domain-containing protein 2 precursor; FAD-dependent oxidoreductase domain-containing protein 2", "tax_id": 7955, "disease": "", "pathway": " (dre:767722)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "23594743", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: SRR26395062.737435.1, SRR26395012.166861.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505372 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000003.1. On or before Jul 8, 2025 this sequence version replaced XP_005163970.1, NP_001070128.1., [RefSeq]; Probable flavoprotein which may function in endoplasmic reticulum associated degradation (ERAD). May bind non-native proteins in the endoplasmic reticulum and target them to the ubiquitination machinery for subsequent degradation (By similarity)., [UniProtKB]", "predicted_glycosites": 2, "predicted_n_glycosites": 2, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 2, "binding_glycan_count": 0, "secondary_ac_list": "Q08CE3", "ec_number_list": [], "go_molecular_function": "GO:0050660 flavin adenine dinucleotide binding;GO:0004497 monooxygenase activity", "go_cellular_component": "GO:0005788 endoplasmic reticulum lumen", "go_biological_process": "GO:0036503 ERAD pathway", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "B0UXS1-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000010000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "B0UY56-1", "uniprot_id": [ { "id": "B0UY56_DANRE", "url": "https://www.uniprot.org/uniprot/B0UY56", "type": "external" } ], "mass": 30528.0, "length": 271, "protein_name": "Tumor necrosis factor-inducible gene 6 protein", "gene_name": "tnfaip6", "organism": "Zebrafish", "refseq_name": "tumor necrosis factor-inducible gene 6 protein precursor", "refseq_ac": [ { "id": "NP_001035333", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001035333", "type": "external" } ], "gene_names_uniprotkb": "tnfaip6; si:dkey-89p3.1; zgc:136830", "gene_names_refseq": "si:dkey-89p3.1; tnfaip6; zgc:136830", "protein_names_uniprotkb": "Tumor necrosis factor-inducible gene 6 protein; TNF-stimulated gene 6 protein; Tumor necrosis factor alpha-induced protein 6", "protein_names_refseq": "tumor necrosis factor-inducible gene 6 protein precursor", "tax_id": 7955, "disease": "corneal neovascularization (Disease Ontology:DOID:11382); atopic dermatitis (Disease Ontology:DOID:3310); conjunctival disease (Disease Ontology:DOID:4251)", "pathway": " (dre:678516); (R-DRE-6798695)", "pathway_count": 2, "publication_count": 5, "publication_id_list": "24683187;28440030;32851162;33412105;35829917", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC115283.1, EH441188.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505372 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC115283.1. On or before May 2, 2008 this sequence version replaced NP_001070640.1, NP_001035333.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 3, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1N8R8", "ec_number_list": [], "go_molecular_function": "GO:0016787 hydrolase activity;GO:0005540 hyaluronic acid binding", "go_cellular_component": "GO:0005615 extracellular space", "go_biological_process": "GO:0007155 cell adhesion;GO:0050728 negative regulation of inflammatory response", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "B0UY56-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "B0UYB4-1", "uniprot_id": [ { "id": "B0UYB4_DANRE", "url": "https://www.uniprot.org/uniprot/B0UYB4", "type": "external" } ], "mass": 58759.0, "length": 513, "protein_name": "1.14.15.15; Cytochrome P450", "gene_name": "cyp27a3", "organism": "Zebrafish", "refseq_name": "cytochrome P450", "refseq_ac": [ { "id": "NP_001116749", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001116749", "type": "external" } ], "gene_names_uniprotkb": "cyp27a3; si:dkey-91i10.3", "gene_names_refseq": "cyp27a3; si:dkey-91i10.3", "protein_names_uniprotkb": "1.14.15.15; Cytochrome P450", "protein_names_refseq": "cytochrome P450", "tax_id": 7955, "disease": "", "pathway": " (dre:565876)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "21887296;26469318;27189481;28252024;34356784", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GFIL01037757.1, SRR32588727.656425.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505373 [ECO:0000348] ##Evidence-Data-END## PREDICTED REFSEQ: This record has not been reviewed and the function is unknown. The reference sequence was derived from JBMGRA010000009.1. On Apr 11, 2008 this sequence version replaced XP_694230.2., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NIG3", "ec_number_list": [], "go_molecular_function": "GO:0031073 cholesterol 26-hydroxylase activity;GO:0005506 iron ion binding;GO:0020037 heme binding;GO:0030343 vitamin D3 25-hydroxylase activity;GO:0047748 cholestanetetraol 26-dehydrogenase activity", "go_cellular_component": "GO:0005739 mitochondrion", "go_biological_process": "GO:0008203 cholesterol metabolic process;GO:0036378 calcitriol biosynthetic process from calciol", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "B0UYB4-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "B0UYB6-1", "uniprot_id": [ { "id": "B0UYB6_DANRE", "url": "https://www.uniprot.org/uniprot/B0UYB6", "type": "external" } ], "mass": 33291.0, "length": 297, "protein_name": "Metabolism of cobalamin associated Db", "gene_name": "mmadhcb", "organism": "Zebrafish", "refseq_name": "metabolism of cobalamin associated Db", "refseq_ac": [ { "id": "NP_991157", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_991157", "type": "external" } ], "gene_names_uniprotkb": "mmadhcb; My011; mmadhc; zgc:91819", "gene_names_refseq": "My011; mmadhcb; mmadhc; zgc:91819", "protein_names_uniprotkb": "Metabolism of cobalamin associated Db", "protein_names_refseq": "metabolism of cobalamin associated Db; metabolism of cobalamin associated D; methylmalonic aciduria (cobalamin deficiency) cblD type, with homocystinuria", "tax_id": 7955, "disease": "methylmalonic aciduria and homocystinuria type cblD (Disease Ontology:DOID:0050716)", "pathway": " (dre:402886); (R-DRE-9759218)", "pathway_count": 2, "publication_count": 4, "publication_id_list": "15520368;16466575;26469318;27189481", "class_list": "", "function": "", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1PGE0", "ec_number_list": [], "go_molecular_function": "GO:0140104 molecular carrier activity", "go_cellular_component": "GO:0005739 mitochondrion", "go_biological_process": "GO:0009235 cobalamin metabolic process", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "B0UYB6-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "B0UYF4-1", "uniprot_id": [ { "id": "B0UYF4_DANRE", "url": "https://www.uniprot.org/uniprot/B0UYF4", "type": "external" } ], "mass": 71697.0, "length": 632, "protein_name": "A-type voltage-gated potassium channel KCND1", "gene_name": "kcnd1", "organism": "Zebrafish", "refseq_name": "A-type voltage-gated potassium channel KCND1", "refseq_ac": [ { "id": "NP_001119942", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001119942", "type": "external" } ], "gene_names_uniprotkb": "kcnd1; si:dkey-8e10.1", "gene_names_refseq": "kcnd1; si:dkey-8e10.1", "protein_names_uniprotkb": "A-type voltage-gated potassium channel KCND1; Potassium voltage-gated channel subfamily D member 1; Voltage-gated potassium channel subunit Kv4.1", "protein_names_refseq": "A-type voltage-gated potassium channel KCND1", "tax_id": 7955, "disease": "", "pathway": " (dre:100001681); (R-DRE-5576894)", "pathway_count": 2, "publication_count": 3, "publication_id_list": "26469318;27189481;28252024", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: SRR32588729.32923389.1, SRR32588722.43870546.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000008.1. On Jul 31, 2008 this sequence version replaced XP_001921997.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NJF2;A0AC58G5N3;A0AC58G5N7;A0AC58G5P7", "ec_number_list": [], "go_molecular_function": "GO:0005250 A-type (transient outward) potassium channel activity", "go_cellular_component": "GO:0043025 neuronal cell body;GO:0043197 dendritic spine;GO:0045211 postsynaptic membrane;GO:0008076 voltage-gated potassium channel complex", "go_biological_process": "GO:0051260 protein homooligomerization;GO:0001508 action potential;GO:0034220 monoatomic ion transmembrane transport;GO:0071805 potassium ion transmembrane transport", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "B0UYF4-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "B0UYI1-1", "uniprot_id": [ { "id": "TEAN2_DANRE", "url": "https://www.uniprot.org/uniprot/B0UYI1", "type": "external" } ], "mass": 24667.0, "length": 210, "protein_name": "Transcription elongation factor A N-terminal and central domain-containing protein 2", "gene_name": "tceanc2", "organism": "Zebrafish", "refseq_name": "transcription elongation factor A N-terminal and central domain-containing protein 2", "refseq_ac": [ { "id": "NP_001333180", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001333180", "type": "external" } ], "gene_names_uniprotkb": "tceanc2; si:dkey-63k7.9; tcean2", "gene_names_refseq": "si:dkey-63k7.9; tcean2; tceanc2", "protein_names_uniprotkb": "Transcription elongation factor A N-terminal and central domain-containing protein 2", "protein_names_refseq": "transcription elongation factor A N-terminal and central domain-containing protein 2", "tax_id": 7955, "disease": "", "pathway": " (dre:567698)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "23594743", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: CT732597.2, EH559818.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505375 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000002.1, EH538597.1 and EH559818.1. On Oct 4, 2016 this sequence version replaced XP_696087.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0003711 transcription elongation factor activity;GO:0003746 translation elongation factor activity", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006368 transcription elongation by RNA polymerase II", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "B0UYI1-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "B0UYJ1-1", "uniprot_id": [ { "id": "B0UYJ1_DANRE", "url": "https://www.uniprot.org/uniprot/B0UYJ1", "type": "external" } ], "mass": 24456.0, "length": 221, "protein_name": "LHFPL tetraspan subfamily member 5b", "gene_name": "lhfpl5b", "organism": "Zebrafish", "refseq_name": "LHFPL tetraspan subfamily member 5b", "refseq_ac": [ { "id": "NP_001103583", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001103583", "type": "external" } ], "gene_names_uniprotkb": "lhfpl5b; lhfpl5; zgc:171589", "gene_names_refseq": "lhfpl5b; lhfpl5; zgc:171589", "protein_names_uniprotkb": "LHFPL tetraspan subfamily member 5b", "protein_names_refseq": "LHFPL tetraspan subfamily member 5b; lipoma HMGIC fusion partner-like 5b; lipoma HMGIC fusion partner-like 5", "tax_id": 7955, "disease": "autosomal recessive nonsyndromic deafness 67 (Disease Ontology:DOID:0110518)", "pathway": "", "pathway_count": 0, "publication_count": 8, "publication_id_list": "21172006;26469318;32009898;33584199;34329618;34665127;36161311;37272538", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC153982.1, DV597348.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505381 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC153982.1. On Oct 7, 2011 this sequence version replaced NP_001103583.1. Sequence Note: This RefSeq record was created from a transcript of a different strain than the reference genome strain because no single transcript from the reference strain was available for the full length of the gene. The extent of this transcript is supported by transcript alignments and orthologous data., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NGC9;A0AC58G7V0", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "GO:0007605 sensory perception of sound;GO:0050974 detection of mechanical stimulus involved in sensory perception;GO:0035678 neuromast hair cell morphogenesis", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "B0UYJ1-1", "record_type": "protein", "filter_code": "0000000.0000110.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "B0UYL8-1", "uniprot_id": [ { "id": "SERP3_DANRE", "url": "https://www.uniprot.org/uniprot/B0UYL8", "type": "external" } ], "mass": 46401.0, "length": 417, "protein_name": "Probable serpin E3", "gene_name": "serpine3", "organism": "Zebrafish", "refseq_name": "probable serpin E3 precursor", "refseq_ac": [ { "id": "NP_001116709", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001116709", "type": "external" } ], "gene_names_uniprotkb": "serpine3; im:7152538; si:ch211-219a4.10", "gene_names_refseq": "im:7152538; serpine3; si:ch211-219a4.10", "protein_names_uniprotkb": "Probable serpin E3", "protein_names_refseq": "Probable serpin E3; probable serpin E3 precursor", "tax_id": 7955, "disease": "", "pathway": " (dre:556612)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "23594743;35727138", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GDQQ01003547.1, GDQH01017643.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000009.1. On Apr 11, 2008 this sequence version replaced XP_684545.2., [RefSeq]; Probable serine protease inhibitor., [UniProtKB]; Vision-related convergent gene losses reveal SERPINE3's unknown role in the eye. Publication Status: Online-Only, [RefSeq, PubMed]", "predicted_glycosites": 5, "predicted_n_glycosites": 5, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 5, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0004867 serine-type endopeptidase inhibitor activity", "go_cellular_component": "GO:0005615 extracellular space", "go_biological_process": "GO:0043010 camera-type eye development", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "B0UYL8-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000010000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "B0UYM1-1", "uniprot_id": [ { "id": "B0UYM1_DANRE", "url": "https://www.uniprot.org/uniprot/B0UYM1", "type": "external" } ], "mass": 52722.0, "length": 477, "protein_name": "Cis-aconitate decarboxylase", "gene_name": "acod1", "organism": "Zebrafish", "refseq_name": "cis-aconitate decarboxylase", "refseq_ac": [ { "id": "NP_001119928", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001119928", "type": "external" } ], "gene_names_uniprotkb": "acod1; irg1; si:dkey-57a22.9; zCAD", "gene_names_refseq": "acod1; irg1; si:dkey-57a22.9; zCAD", "protein_names_uniprotkb": "Cis-aconitate decarboxylase; 4.1.1.6; Aconitate decarboxylase 1; Aconitate decarboxylase; Cis-aconitic acid decarboxylase; Immune-responsive gene 1 protein", "protein_names_refseq": "cis-aconitate decarboxylase; immunoresponsive 1 homolog; immunoresponsive gene 1", "tax_id": 7955, "disease": "esophageal carcinoma (Disease Ontology:DOID:1107); head and neck squamous cell carcinoma (Disease Ontology:DOID:5520)", "pathway": " (dre:795305)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "15520368;23586901;23931757;26123890;27939723;36516756;36645087;36736605;38131137;39557479", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GFIL01013498.1, GDQQ01003224.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505375, SAMEA3505377 [ECO:0006172] ##Evidence-Data-END## ##RefSeq-Attributes-START## CDS uses downstream in-frame AUG :: lack of evidence for use of upstream AUG ##RefSeq-Attributes-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000009.1. On Jul 31, 2008 this sequence version replaced XP_001335444.1. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications., [RefSeq]; Cis-aconitate decarboxylase that catalyzes production of itaconate and is involved in the inhibition of the inflammatory response. Acts as a negative regulator of the Toll-like receptors (TLRs)-mediated inflammatory innate response by stimulating the tumor necrosis factor alpha-induced protein TNFAIP3 expression via reactive oxygen species (ROS) in LPS-tolerized macrophages. Involved in antimicrobial response of innate immune cells; ACOD1-mediated itaconic acid production contributes to the antimicrobial activity of macrophages by generating itaconate, leading to alkylation of proteins, such as TFEB. Involved in antiviral response following infection by flavivirus in neurons: ACOD1-mediated itaconate production inhibits the activity of succinate dehydrogenase, generating a metabolic state in neurons that suppresses replication of viral genomes. Plays a role in the embryo implantation., [UniProtKB, UniProtKB]; IRG1 functions as a critical regulator of macrophage function by helping regulate an increase in beta-oxidation-fueled mROS production., [RefSeq, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 2, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NJI3", "ec_number_list": [ { "id": "4.1.1.6", "url": "https://www.rhea-db.org/rhea/?query=ec:4.1.1.6", "type": "external" } ], "go_molecular_function": "GO:0047613 aconitate decarboxylase activity;GO:0042803 protein homodimerization activity", "go_cellular_component": "GO:0005739 mitochondrion", "go_biological_process": "GO:0002760 positive regulation of antimicrobial humoral response;GO:0072573 tolerance induction to lipopolysaccharide;GO:0006952 defense response;GO:0006954 inflammatory response;GO:0045087 innate immune response", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "B0UYM1-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "B0UYN0-1", "uniprot_id": [ { "id": "B0UYN0_DANRE", "url": "https://www.uniprot.org/uniprot/B0UYN0", "type": "external" } ], "mass": 95313.0, "length": 847, "protein_name": "Uncharacterized protein LOC569865", "gene_name": "sgo2", "organism": "Zebrafish", "refseq_name": "uncharacterized protein LOC569865", "refseq_ac": [ { "id": "NP_001116771", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001116771", "type": "external" } ], "gene_names_uniprotkb": "sgo2; si:dkey-57a22.11", "gene_names_refseq": "sgo2; si:dkey-57a22.11", "protein_names_uniprotkb": "Uncharacterized protein LOC569865", "protein_names_refseq": "uncharacterized protein LOC569865", "tax_id": 7955, "disease": "", "pathway": " (dre:569865); (R-DRE-141430); (R-DRE-141444); (R-DRE-2467813); (R-DRE-2500257); (R-DRE-5663220)", "pathway_count": 6, "publication_count": 2, "publication_id_list": "26469318;27189481", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GFIL01037533.1, GDQH01017315.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA4476742, SAMEA4476750 [ECO:0000348] ##Evidence-Data-END## PREDICTED REFSEQ: This record has not been reviewed and the function is unknown. The reference sequence was derived from JBMGRA010000009.1. On Apr 11, 2008 this sequence version replaced XP_706523.2., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NIL6", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0030892 mitotic cohesin complex;GO:0005634 nucleus;GO:0000776 kinetochore", "go_biological_process": "GO:0045143 homologous chromosome segregation;GO:0051301 cell division;GO:0071962 mitotic sister chromatid cohesion, centromeric;GO:0051177 meiotic sister chromatid cohesion", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "B0UYN0-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "B0UYS0-1", "uniprot_id": [ { "id": "B0UYS0_DANRE", "url": "https://www.uniprot.org/uniprot/B0UYS0", "type": "external" } ], "mass": 48879.0, "length": 460, "protein_name": "Keratin, type I cytoskeletal 15", "gene_name": "krt15", "organism": "Zebrafish", "refseq_name": "keratin, type I cytoskeletal 15", "refseq_ac": [ { "id": "NP_998688", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_998688", "type": "external" } ], "gene_names_uniprotkb": "krt15; wu:fa91c06; wu:fa95d04; zgc:55334", "gene_names_refseq": "krt15; wu:fa91c06; wu:fa95d04; zgc:55334", "protein_names_uniprotkb": "Keratin, type I cytoskeletal 15", "protein_names_refseq": "cytokeratin; keratin, type I cytoskeletal 15", "tax_id": 7955, "disease": "nonepidermolytic palmoplantar keratoderma (Disease Ontology:DOID:0050428); white sponge nevus (Disease Ontology:DOID:0050448); pachyonychia congenita (Disease Ontology:DOID:0050449); generalized severe epidermolysis bullosa simplex 1A (Disease Ontology:DOID:0060735); epidermolysis bullosa simplex (Disease Ontology:DOID:4644); esophagus small cell carcinoma (Disease Ontology:DOID:7134)", "pathway": " (dre:406844); (R-DRE-6805567); (R-DRE-6809371)", "pathway_count": 3, "publication_count": 10, "publication_id_list": "16109975;17570670;19289112;19932050;23663777;31952464;32059773;33077489;33527896;34991727", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC044144.1, GFIL01014168.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505378, SAMEA3505382 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000011.1, EH115385.1, EH448300.1, EH471533.1 and EH452973.1. On Sep 4, 2015 this sequence version replaced NP_998688.1. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 6, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1PJL5", "ec_number_list": [], "go_molecular_function": "GO:0030280 structural constituent of skin epidermis", "go_cellular_component": "GO:0005856 cytoskeleton;GO:0045095 keratin filament", "go_biological_process": "GO:0002009 morphogenesis of an epithelium", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "B0UYS0-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "B0UYS2-1", "uniprot_id": [ { "id": "B0UYS2_DANRE", "url": "https://www.uniprot.org/uniprot/B0UYS2", "type": "external" } ], "mass": 71188.0, "length": 630, "protein_name": "Interleukin-1 receptor-associated kinase 3", "gene_name": "irak3", "organism": "Zebrafish", "refseq_name": "interleukin-1 receptor-associated kinase 3", "refseq_ac": [ { "id": "XP_017210784", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_017210784", "type": "external" } ], "gene_names_uniprotkb": "irak3", "gene_names_refseq": "irak3", "protein_names_uniprotkb": "Interleukin-1 receptor-associated kinase 3", "protein_names_refseq": "interleukin-1 receptor-associated kinase 3", "tax_id": 7955, "disease": "osteoporosis (Disease Ontology:DOID:11476); asthma (Disease Ontology:DOID:2841); tuberculosis (Disease Ontology:DOID:399); melioidosis (Disease Ontology:DOID:5052); type 1 diabetes mellitus (Disease Ontology:DOID:9744)", "pathway": " (dre:567444)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133179) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 5, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M6YY85", "ec_number_list": [], "go_molecular_function": "GO:0004672 protein kinase activity;GO:0005524 ATP binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005886 plasma membrane", "go_biological_process": "GO:0070498 interleukin-1-mediated signaling pathway;GO:0035162 embryonic hemopoiesis;GO:0035556 intracellular signal transduction;GO:0043123 positive regulation of canonical NF-kappaB signal transduction;GO:0031663 lipopolysaccharide-mediated signaling pathway", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "B0UYS2-1", "record_type": "protein", "filter_code": "0000000.0000011.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "B0UYT6-1", "uniprot_id": [ { "id": "B0UYT6_DANRE", "url": "https://www.uniprot.org/uniprot/B0UYT6", "type": "external" } ], "mass": 47154.0, "length": 423, "protein_name": "aspartate transaminase", "gene_name": "got1l1", "organism": "Zebrafish", "refseq_name": "putative aspartate aminotransferase, cytoplasmic 2", "refseq_ac": [ { "id": "NP_001116776", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001116776", "type": "external" } ], "gene_names_uniprotkb": "got1l1; got1; wu:fj01g02; zgc:152691", "gene_names_refseq": "got1l1; got1; wu:fj01g02; zgc:152691", "protein_names_uniprotkb": "aspartate transaminase; 2.6.1.1", "protein_names_refseq": "glutamic-oxaloacetic transaminase 1, soluble; putative aspartate aminotransferase, cytoplasmic 2", "tax_id": 7955, "disease": "", "pathway": " (dre:791730)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "26469318;27189481;29462671;35457018", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC124084.1, GFIL01011775.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA898404, SAMN01765705 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000008.1. On or before Apr 17, 2008 this sequence version replaced NP_001070205.1, XP_001331329.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NIL9", "ec_number_list": [], "go_molecular_function": "GO:0030170 pyridoxal phosphate binding;GO:0004069 L-aspartate:2-oxoglutarate aminotransferase activity", "go_cellular_component": "GO:0005829 cytosol", "go_biological_process": "GO:0006532 aspartate biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "B0UYT6-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "B0UYT8-1", "uniprot_id": [ { "id": "B0UYT8_DANRE", "url": "https://www.uniprot.org/uniprot/B0UYT8", "type": "external" } ], "mass": 16969.0, "length": 156, "protein_name": "Nucleoplasmin-2a", "gene_name": "npm2a", "organism": "Zebrafish", "refseq_name": "nucleoplasmin-2a", "refseq_ac": [ { "id": "NP_001186842", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001186842", "type": "external" } ], "gene_names_uniprotkb": "npm2a; im:7155659", "gene_names_refseq": "im:7155659; npm2a", "protein_names_uniprotkb": "Nucleoplasmin-2a", "protein_names_refseq": "nucleoplasmin-2a", "tax_id": 7955, "disease": "primary ovarian insufficiency (Disease Ontology:DOID:5426)", "pathway": " (dre:797865)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "18541024;27189481;29462671;29944347;30419815", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: EH491953.1, EH551694.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA898399, SAMEA898400 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from EH536399.1 and EH518282.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NWJ0", "ec_number_list": [], "go_molecular_function": "GO:0003682 chromatin binding;GO:0003723 RNA binding;GO:0042393 histone binding", "go_cellular_component": "GO:0005654 nucleoplasm;GO:0005730 nucleolus;GO:0005737 cytoplasm", "go_biological_process": "GO:0006338 chromatin remodeling", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "B0UYT8-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "B0UYT9-1", "uniprot_id": [ { "id": "B0UYT9_DANRE", "url": "https://www.uniprot.org/uniprot/B0UYT9", "type": "external" } ], "mass": 46486.0, "length": 413, "protein_name": "Adrenoceptor beta 3a", "gene_name": "adrb3a", "organism": "Zebrafish", "refseq_name": "adrenoceptor beta 3a", "refseq_ac": [ { "id": "NP_001121807", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001121807", "type": "external" } ], "gene_names_uniprotkb": "adrb3a; im:7154935; si:ch211-215f19.1", "gene_names_refseq": "adrb3a; im:7154935; si:ch211-215f19.1", "protein_names_uniprotkb": "Adrenoceptor beta 3a", "protein_names_refseq": "adrenergic receptor, beta 3a; adrenoceptor beta 3a; beta-3a-adrenergic receptor", "tax_id": 7955, "disease": "metabolic dysfunction-associated steatotic liver disease (Disease Ontology:DOID:0080208); dilated cardiomyopathy 1H (Disease Ontology:DOID:0110429); Alzheimer's disease (Disease Ontology:DOID:10652); hypertension (Disease Ontology:DOID:10763); gout (Disease Ontology:DOID:13189); endometrial cancer (Disease Ontology:DOID:1380); cystic fibrosis (Disease Ontology:DOID:1485); coronary artery disease (Disease Ontology:DOID:3393); congestive heart failure (Disease Ontology:DOID:6000); rheumatoid arthritis (Disease Ontology:DOID:7148); diabetic retinopathy (Disease Ontology:DOID:8947); type 2 diabetes mellitus (Disease Ontology:DOID:9352); obesity (Disease Ontology:DOID:9970)", "pathway": " (dre:558248); (R-DRE-390696)", "pathway_count": 2, "publication_count": 10, "publication_id_list": "19540320;22207143;23661550;26469318;27189481;29462671;31042481;32179471;33558126;35665450", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GDQQ01024272.1, GDQH01029998.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505371, SAMEA3505372 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000008.1. On Jul 31, 2008 this sequence version replaced XP_686532.2., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 13, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8N1TSK4;E7F0H4", "ec_number_list": [], "go_molecular_function": "GO:0004938 alpha2-adrenergic receptor activity;GO:0051379 epinephrine binding;GO:0015052 beta3-adrenergic receptor activity", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "GO:0043410 positive regulation of MAPK cascade;GO:0071880 adenylate cyclase-activating adrenergic receptor signaling pathway;GO:0071881 adenylate cyclase-inhibiting adrenergic receptor signaling pathway;GO:0002025 norepinephrine-epinephrine-mediated vasodilation involved in regulation of systemic arterial blood pressure", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "B0UYT9-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "B0UYU0-1", "uniprot_id": [ { "id": "B0UYU0_DANRE", "url": "https://www.uniprot.org/uniprot/B0UYU0", "type": "external" } ], "mass": 51668.0, "length": 472, "protein_name": "Rh50-like protein isoform 2", "gene_name": "rh50", "organism": "Zebrafish", "refseq_name": "Rh50-like protein isoform 2", "refseq_ac": [ { "id": "NP_001119916", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001119916", "type": "external" } ], "gene_names_uniprotkb": "rh50; Rhp2", "gene_names_refseq": "Rhp2; rh50", "protein_names_uniprotkb": "Rh50-like protein isoform 2", "protein_names_refseq": "Rh50-like protein isoform 2", "tax_id": 7955, "disease": "", "pathway": " (dre:791729)", "pathway_count": 1, "publication_count": 3, "publication_id_list": "10852913;16227429;27189481", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: AF209468.1, GDQQ01004908.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA4476760 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000008.1., [RefSeq]; Functions as an ammonia transporter. May play a role in the elimination of ammonia in the gill., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8N7UYZ2", "ec_number_list": [], "go_molecular_function": "GO:0008519 ammonium channel activity", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "GO:0097272 ammonium homeostasis;GO:0072488 ammonium transmembrane transport", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "B0UYU0-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "B0V0X0-1", "uniprot_id": [ { "id": "B0V0X0_DANRE", "url": "https://www.uniprot.org/uniprot/B0V0X0", "type": "external" } ], "mass": 58509.0, "length": 538, "protein_name": "E3 ubiquitin-protein ligase MSL2", "gene_name": "msl2a", "organism": "Zebrafish", "refseq_name": "E3 ubiquitin-protein ligase MSL2a", "refseq_ac": [ { "id": "NP_001156770", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001156770", "type": "external" } ], "gene_names_uniprotkb": "msl2a; msl2s; si:dkey-223d7.5", "gene_names_refseq": "msl2a; msl2s; si:dkey-223d7.5", "protein_names_uniprotkb": "E3 ubiquitin-protein ligase MSL2; 2.3.2.27; Male-specific lethal-2 homolog", "protein_names_refseq": "E3 ubiquitin-protein ligase MSL2a; male-specific lethal 2 homolog a; male-specific lethal 2-like 1", "tax_id": 7955, "disease": "", "pathway": " (dre:564400)", "pathway_count": 1, "publication_count": 3, "publication_id_list": "26469318;27189481;30017463", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GDQH01017632.1, GFIL01026947.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000002.1. On Jul 17, 2009 this sequence version replaced XP_692830.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NV03", "ec_number_list": [], "go_molecular_function": "GO:0008270 zinc ion binding;GO:0061630 ubiquitin protein ligase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0072487 MSL complex", "go_biological_process": "GO:0006974 DNA damage response;GO:0016567 protein ubiquitination;GO:0006325 chromatin organization", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "B0V0X0-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "B0V0Y5-1", "uniprot_id": [ { "id": "B0V0Y5_DANRE", "url": "https://www.uniprot.org/uniprot/B0V0Y5", "type": "external" } ], "mass": 80258.0, "length": 730, "protein_name": "Phospholipid phosphatase-related protein type 3", "gene_name": "plppr3a", "organism": "Zebrafish", "refseq_name": "phospholipid phosphatase-related protein type 3a", "refseq_ac": [ { "id": "NP_001164499", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001164499", "type": "external" } ], "gene_names_uniprotkb": "plppr3a; lppr3a; si:dkey-57i11.1; wu:fj45h08", "gene_names_refseq": "lppr3a; plppr3a; si:dkey-57i11.1; wu:fj45h08", "protein_names_uniprotkb": "Phospholipid phosphatase-related protein type 3; Inactive phospholipid phosphatase PLPPR3; Lipid phosphate phosphatase-related protein type 3; Plasticity-related gene 2 protein", "protein_names_refseq": "PRG2B; lipid phosphate phosphatase-related protein type 3a; phospholipid phosphatase-related protein type 3a; plasticity-related protein 2", "tax_id": 7955, "disease": "", "pathway": " (dre:553336); (R-DRE-419408)", "pathway_count": 2, "publication_count": 5, "publication_id_list": "19666827;22855693;26469318;27189481;28252024", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: SRR32588723.1888555.1, SRR32588734.1222851.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000002.1. On Apr 26, 2010 this sequence version replaced XP_687215.3., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NT41", "ec_number_list": [], "go_molecular_function": "GO:0008195 phosphatidate phosphatase activity", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "GO:0007165 signal transduction;GO:0006644 phospholipid metabolic process;GO:0046839 phospholipid dephosphorylation", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "B0V0Y5-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "B0V1A3-1", "uniprot_id": [ { "id": "B0V1A3_DANRE", "url": "https://www.uniprot.org/uniprot/B0V1A3", "type": "external" } ], "mass": 55818.0, "length": 508, "protein_name": "Zinc finger and BTB domain-containing protein 34", "gene_name": "zbtb34", "organism": "Zebrafish", "refseq_name": "zinc finger and BTB domain-containing protein 34", "refseq_ac": [ { "id": "NP_001116183", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001116183", "type": "external" } ], "gene_names_uniprotkb": "zbtb34", "gene_names_refseq": "zbtb34", "protein_names_uniprotkb": "Zinc finger and BTB domain-containing protein 34", "protein_names_refseq": "zinc finger and BTB domain-containing protein 34", "tax_id": 7955, "disease": "", "pathway": " (dre:100004439)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "26469318;27189481", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GDQH01019352.1, GDQQ01008750.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505372, SAMEA3505378 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000008.1. On Mar 17, 2008 this sequence version replaced XP_001343755.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NI92", "ec_number_list": [], "go_molecular_function": "GO:0008270 zinc ion binding;GO:0001227 DNA-binding transcription repressor activity, RNA polymerase II-specific;GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding", "go_cellular_component": "GO:0005654 nucleoplasm", "go_biological_process": "GO:0000122 negative regulation of transcription by RNA polymerase II;GO:0006351 DNA-templated transcription;GO:0002682 regulation of immune system process;GO:0001817 regulation of cytokine production", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "B0V1A3-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "B0V1A5-1", "uniprot_id": [ { "id": "B0V1A5_DANRE", "url": "https://www.uniprot.org/uniprot/B0V1A5", "type": "external" } ], "mass": 89194.0, "length": 787, "protein_name": "Aminopeptidase O", "gene_name": "aopep", "organism": "Zebrafish", "refseq_name": "aminopeptidase O", "refseq_ac": [ { "id": "NP_001116730", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001116730", "type": "external" } ], "gene_names_uniprotkb": "aopep; cb974; wu:fa96d09; wu:fc79b08; zgc:162939", "gene_names_refseq": "aopep; cb974; wu:fa96d09; wu:fc79b08; zgc:162939", "protein_names_uniprotkb": "Aminopeptidase O", "protein_names_refseq": "aminopeptidase O", "tax_id": 7955, "disease": "dystonia 31 (Disease Ontology:DOID:0060938)", "pathway": " (dre:560737)", "pathway_count": 1, "publication_count": 3, "publication_id_list": "16515849;26469318;27189481", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: SRR32588734.2594052.1, SRR32588730.13159041.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000008.1. On Apr 11, 2008 this sequence version replaced XP_689233.2., [RefSeq]; Aminopeptidase which catalyzes the hydrolysis of amino acid residues from the N-terminus of peptide or protein substrates., [UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M2BF57", "ec_number_list": [], "go_molecular_function": "GO:0008270 zinc ion binding;GO:0070006 metalloaminopeptidase activity;GO:0004177 aminopeptidase activity", "go_cellular_component": "GO:0005730 nucleolus", "go_biological_process": "GO:0006508 proteolysis", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "B0V1A5-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "B0V1B1-1", "uniprot_id": [ { "id": "B0V1B1_DANRE", "url": "https://www.uniprot.org/uniprot/B0V1B1", "type": "external" } ], "mass": 32962.0, "length": 296, "protein_name": "Kazal-type serine peptidase inhibitor domain 3 precursor", "gene_name": "kazald3", "organism": "Zebrafish", "refseq_name": "Kazal-type serine peptidase inhibitor domain 3 precursor", "refseq_ac": [ { "id": "NP_001116791", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001116791", "type": "external" } ], "gene_names_uniprotkb": "kazald3; im:7144240", "gene_names_refseq": "im:7144240; kazald3", "protein_names_uniprotkb": "Kazal-type serine peptidase inhibitor domain 3 precursor", "protein_names_refseq": "Kazal-type serine peptidase inhibitor domain 3 precursor; kazald1", "tax_id": 7955, "disease": "", "pathway": " (dre:100000101)", "pathway_count": 1, "publication_count": 3, "publication_id_list": "18541024;26469318;27189481", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GDQQ01043144.1, GFIL01013742.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505392 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000008.1. On Apr 11, 2008 this sequence version replaced XP_001336653.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NGV0", "ec_number_list": [], "go_molecular_function": "GO:0005520 insulin-like growth factor binding;GO:0048018 receptor ligand activity", "go_cellular_component": "GO:0005615 extracellular space", "go_biological_process": "GO:0001558 regulation of cell growth;GO:0009966 regulation of signal transduction", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "B0V1B1-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "B0V1G1-1", "uniprot_id": [ { "id": "B0V1G1_DANRE", "url": "https://www.uniprot.org/uniprot/B0V1G1", "type": "external" } ], "mass": 7431.0, "length": 65, "protein_name": "Stress-associated endoplasmic reticulum protein", "gene_name": "serp2", "organism": "Zebrafish", "refseq_name": "stress-associated endoplasmic reticulum protein 2", "refseq_ac": [ { "id": "NP_001289406", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001289406", "type": "external" } ], "gene_names_uniprotkb": "serp2; si:ch211-161h23.3", "gene_names_refseq": "serp2; si:ch211-161h23.3", "protein_names_uniprotkb": "Stress-associated endoplasmic reticulum protein", "protein_names_refseq": "stress-associated endoplasmic reticulum protein 2", "tax_id": 7955, "disease": "", "pathway": " (dre:100319240)", "pathway_count": 1, "publication_count": 3, "publication_id_list": "26469318;27189481;36574072", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: EH588713.1, EH584072.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from EH434448.1 and EH584072.1. On Oct 22, 2014 this sequence version replaced XP_002663396.1., [RefSeq]; Interacts with target proteins during their translocation into the lumen of the endoplasmic reticulum. Protects unfolded target proteins against degradation during ER stress. May facilitate glycosylation of target proteins after termination of ER stress. May modulate the use of N-glycosylation sites on target proteins., [UniProtKB, UniProtKB]; Interacts with target proteins during translocation into the lumen of the endoplasmic reticulum. Protects unfolded target proteins against degradation and facilitate correct glycosylation., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1P1L7", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005783 endoplasmic reticulum;GO:0005789 endoplasmic reticulum membrane", "go_biological_process": "GO:0030968 endoplasmic reticulum unfolded protein response", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "B0V1G1-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "B0V1J6-1", "uniprot_id": [ { "id": "B0V1J6_DANRE", "url": "https://www.uniprot.org/uniprot/B0V1J6", "type": "external" } ], "mass": 30334.0, "length": 267, "protein_name": "Iron-sulfur cluster co-chaperone protein HscB", "gene_name": "hscb", "organism": "Zebrafish", "refseq_name": "iron-sulfur cluster co-chaperone protein HscB", "refseq_ac": [ { "id": "NP_001121870", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001121870", "type": "external" } ], "gene_names_uniprotkb": "hscb; si:ch211-207k7.4", "gene_names_refseq": "hscb; si:ch211-207k7.4", "protein_names_uniprotkb": "Iron-sulfur cluster co-chaperone protein HscB", "protein_names_refseq": "iron-sulfur cluster co-chaperone protein HscB", "tax_id": 7955, "disease": "sideroblastic anemia 5 (Disease Ontology:DOID:0061007); sideroblastic anemia (Disease Ontology:DOID:8955)", "pathway": " (dre:100150029); (R-DRE-1268020); (R-DRE-6799198); (R-DRE-9865881)", "pathway_count": 4, "publication_count": 2, "publication_id_list": "27189481;32634119", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GDQH01012615.1, GDQQ01048038.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## ##RefSeq-Attributes-START## gene product(s) localized to mito. :: inferred from homology ##RefSeq-Attributes-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000005.1. On Jun 7, 2025 this sequence version replaced NP_001121870.1., [RefSeq]; Acts as a co-chaperone in iron-sulfur cluster assembly in mitochondria. Required for incorporation of iron-sulfur clusters into SDHB, the iron-sulfur protein subunit of succinate dehydrogenase that is involved in complex II of the mitochondrial electron transport chain. Recruited to SDHB by interaction with SDHAF1 which first binds SDHB and then recruits the iron-sulfur transfer complex formed by HSC20, HSPA9 and ISCU through direct binding to HSC20. Plays an essential role in hematopoiesis., [UniProtKB, UniProtKB]; Acts as a co-chaperone in iron-sulfur cluster assembly in the cytoplasm. Also mediates complex formation between components of the cytosolic iron-sulfur biogenesis pathway and the CIA targeting complex composed of CIAO1, DIPK1B/FAM69B and MMS19 by binding directly to the scaffold protein ISCU and to CIAO1. This facilitates iron-sulfur cluster insertion into a number of cytoplasmic and nuclear proteins including POLD1, ELP3, DPYD and PPAT., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 2, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NK32", "ec_number_list": [], "go_molecular_function": "GO:0046872 metal ion binding;GO:0051087 protein-folding chaperone binding;GO:0001671 ATPase activator activity", "go_cellular_component": "GO:0005739 mitochondrion", "go_biological_process": "GO:0051259 protein complex oligomerization;GO:0044571 [2Fe-2S] cluster assembly", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "B0V1J6-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "B0V1K7-1", "uniprot_id": [ { "id": "B0V1K7_DANRE", "url": "https://www.uniprot.org/uniprot/B0V1K7", "type": "external" } ], "mass": 42028.0, "length": 369, "protein_name": "C-C chemokine receptor type 9a", "gene_name": "ccr9a", "organism": "Zebrafish", "refseq_name": "C-C chemokine receptor type 9a", "refseq_ac": [ { "id": "NP_001231645", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001231645", "type": "external" } ], "gene_names_uniprotkb": "ccr9a; sb:eu630", "gene_names_refseq": "ccr9a; sb:eu630", "protein_names_uniprotkb": "C-C chemokine receptor type 9a", "protein_names_refseq": "C-C chemokine receptor type 9a; ccr9; dr-chr2-CCR9-44.2-EK8447; zfCCR9-1", "tax_id": 7955, "disease": "asthma (Disease Ontology:DOID:2841)", "pathway": " (dre:553366); (R-DRE-380108); (R-DRE-418594)", "pathway_count": 3, "publication_count": 10, "publication_id_list": "16365434;19022503;19559469;20713961;23145839;31511326;32198141;32822590;33785593;33951474", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC092878.1, CN324432.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505371, SAMEA3505373 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC092878.1. On Sep 28, 2011 this sequence version replaced XP_001343888.1. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1P248", "ec_number_list": [], "go_molecular_function": "GO:0016493 C-C chemokine receptor activity;GO:0019957 C-C chemokine binding", "go_cellular_component": "GO:0005769 early endosome;GO:0009897 external side of plasma membrane", "go_biological_process": "GO:0006955 immune response;GO:0007204 positive regulation of cytosolic calcium ion concentration;GO:0019722 calcium-mediated signaling;GO:0060326 cell chemotaxis;GO:0097535 lymphoid lineage cell migration into thymus", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "B0V1K7-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "B0V1P2-1", "uniprot_id": [ { "id": "B0V1P2_DANRE", "url": "https://www.uniprot.org/uniprot/B0V1P2", "type": "external" } ], "mass": 62070.0, "length": 546, "protein_name": "Uncharacterized protein LOC100038790", "gene_name": "gad3", "organism": "Zebrafish", "refseq_name": "uncharacterized protein LOC100038790", "refseq_ac": [ { "id": "NP_001083039", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001083039", "type": "external" } ], "gene_names_uniprotkb": "gad3; zgc:163121", "gene_names_refseq": "gad3; zgc:163121", "protein_names_uniprotkb": "Uncharacterized protein LOC100038790", "protein_names_refseq": "glutamate decarboxylase 1-like; uncharacterized protein LOC100038790", "tax_id": 7955, "disease": "", "pathway": " (dre:100038790); (R-DRE-888568)", "pathway_count": 2, "publication_count": 3, "publication_id_list": "26469318;27461130;31299224", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: SRR26395012.558486.1, SRR32588723.285387.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000002.1. On Aug 12, 2011 this sequence version replaced NP_001083039.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1ND54", "ec_number_list": [], "go_molecular_function": "GO:0030170 pyridoxal phosphate binding;GO:0004351 glutamate decarboxylase activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0048786 presynaptic active zone", "go_biological_process": "GO:0009449 gamma-aminobutyric acid biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "B0V1P2-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "B0V1Q6-1", "uniprot_id": [ { "id": "B0V1Q6_DANRE", "url": "https://www.uniprot.org/uniprot/B0V1Q6", "type": "external" } ], "mass": 31446.0, "length": 283, "protein_name": "Transcription factor JunD", "gene_name": "jund", "organism": "Zebrafish", "refseq_name": "transcription factor JunD", "refseq_ac": [ { "id": "NP_001121814", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001121814", "type": "external" } ], "gene_names_uniprotkb": "jund; si:dkey-251j8.3", "gene_names_refseq": "jund; si:dkey-251j8.3", "protein_names_uniprotkb": "Transcription factor JunD; Transcription factor AP-1 subunit JunD", "protein_names_refseq": "jun D proto-oncogene; transcription factor JunD", "tax_id": 7955, "disease": "cardiomyopathy (Disease Ontology:DOID:0050700); tongue squamous cell carcinoma (Disease Ontology:DOID:0050865); hepatocellular carcinoma (Disease Ontology:DOID:684)", "pathway": " (dre:564873)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "20144602;25556858;26469318;26745549;29196619;31227764;32745784;32810528;36846912;39072972", "class_list": "", "function": "##Evidence-Data-START## Transcript is intronless :: GDQQ01001459.1, CA475886.1 [ECO:0000345] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000002.1. On Jul 31, 2008 this sequence version replaced XP_693289.3. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 3, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NHA2", "ec_number_list": [], "go_molecular_function": "GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding;GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific", "go_cellular_component": "GO:0005667 transcription regulator complex", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0042127 regulation of cell population proliferation;GO:0045944 positive regulation of transcription by RNA polymerase II;GO:0048545 response to steroid hormone;GO:0051726 regulation of cell cycle", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "B0V1Q6-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "B0V233-1", "uniprot_id": [ { "id": "B0V233_DANRE", "url": "https://www.uniprot.org/uniprot/B0V233", "type": "external" } ], "mass": 34194.0, "length": 306, "protein_name": "Junctional adhesion molecule 2b precursor", "gene_name": "jam2b", "organism": "Zebrafish", "refseq_name": "junctional adhesion molecule 2b precursor", "refseq_ac": [ { "id": "NP_001121766", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001121766", "type": "external" } ], "gene_names_uniprotkb": "jam2b; im:7155552; sc:d0813; si:ch211-160b11.5", "gene_names_refseq": "im:7155552; jam2b; sc:d0813; si:ch211-160b11.5", "protein_names_uniprotkb": "Junctional adhesion molecule 2b precursor", "protein_names_refseq": "jamb2; junctional adhesion molecule 2b precursor", "tax_id": 7955, "disease": "basal ganglia calcification (Disease Ontology:DOID:0060230)", "pathway": " (dre:100005301)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "22609279;22815827;25119047;26370768;26469318;31255847;31852685;31888327;32084358;35276066", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GFIL01013665.1, GDQH01027814.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505376, SAMEA3505377 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000009.1. On Jul 31, 2008 this sequence version replaced XP_001919890.1. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications., [RefSeq]; The developmental expression pattern of jam-b2 suggests that it may contribute different properties to extraocular muscles, jaw muscles, and pectoral fins., [RefSeq, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NH75", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005886 plasma membrane;GO:0009986 cell surface;GO:0098636 protein complex involved in cell adhesion;GO:0070160 tight junction", "go_biological_process": "GO:0007159 leukocyte cell-cell adhesion", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "B0V233-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "B0V2R5-1", "uniprot_id": [ { "id": "B0V2R5_DANRE", "url": "https://www.uniprot.org/uniprot/B0V2R5", "type": "external" } ], "mass": 35996.0, "length": 328, "protein_name": "Solute carrier family 35 member A3a", "gene_name": "slc35a3a", "organism": "Zebrafish", "refseq_name": "solute carrier family 35 member A3a", "refseq_ac": [ { "id": "NP_001116721", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001116721", "type": "external" } ], "gene_names_uniprotkb": "slc35a3a; si:ch211-228b23.2", "gene_names_refseq": "si:ch211-228b23.2; slc35a3a", "protein_names_uniprotkb": "Solute carrier family 35 member A3a", "protein_names_refseq": "solute carrier family 35 (UDP-N-acetylglucosamine (UDP-GlcNAc) transporter), member A3a; solute carrier family 35 member A3a", "tax_id": 7955, "disease": "", "pathway": " (dre:559707); (R-DRE-727802)", "pathway_count": 2, "publication_count": 2, "publication_id_list": "26469318;27189481", "class_list": "", "function": "##Evidence-Data-START## RNAseq introns :: single sample supports all introns SAMEA4476750, SAMEA4476796 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CT025750.7. On Apr 11, 2008 this sequence version replaced XP_707145.2., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M2BEC1", "ec_number_list": [], "go_molecular_function": "GO:0005459 UDP-galactose transmembrane transporter activity", "go_cellular_component": "GO:0000139 Golgi membrane", "go_biological_process": "GO:0055085 transmembrane transport", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "B0V2R5-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "B0V2S3-1", "uniprot_id": [ { "id": "B0V2S3_DANRE", "url": "https://www.uniprot.org/uniprot/B0V2S3", "type": "external" } ], "mass": 38525.0, "length": 341, "protein_name": "Adenosine receptor A1", "gene_name": "adora1b", "organism": "Zebrafish", "refseq_name": "adenosine receptor A1b", "refseq_ac": [ { "id": "NP_001122056", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001122056", "type": "external" } ], "gene_names_uniprotkb": "adora1b; adora1; si:dkey-73i4.2", "gene_names_refseq": "adora1b; adora1; si:dkey-73i4.2", "protein_names_uniprotkb": "Adenosine receptor A1", "protein_names_refseq": "adenosine receptor A1b", "tax_id": 7955, "disease": "asthma (Disease Ontology:DOID:2841); obesity (Disease Ontology:DOID:9970)", "pathway": " (dre:100150997); (R-DRE-417973); (R-DRE-418594)", "pathway_count": 3, "publication_count": 10, "publication_id_list": "21496211;21603935;21914471;23303782;25421208;34499158;35585187;35843370;35887219;36362312", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GFIL01000593.1, GDQQ01020677.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505375 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000008.1. On Jul 31, 2008 this sequence version replaced XP_001922591.1. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications., [RefSeq]; Receptor for adenosine. The activity of this receptor is mediated by G proteins which inhibit adenylyl cyclase., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 2, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NI73", "ec_number_list": [], "go_molecular_function": "GO:0001609 G protein-coupled adenosine receptor activity", "go_cellular_component": "GO:0005886 plasma membrane;GO:0030425 dendrite;GO:0045202 synapse", "go_biological_process": "GO:0007186 G protein-coupled receptor signaling pathway", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "B0V2S3-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "B0V2S5-1", "uniprot_id": [ { "id": "B0V2S5_DANRE", "url": "https://www.uniprot.org/uniprot/B0V2S5", "type": "external" } ], "mass": 17398.0, "length": 154, "protein_name": "RING finger protein 11", "gene_name": "rnf11b", "organism": "Zebrafish", "refseq_name": "RING finger protein 11b", "refseq_ac": [ { "id": "NP_001121880", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001121880", "type": "external" } ], "gene_names_uniprotkb": "rnf11b; zgc:114095", "gene_names_refseq": "rnf11b; zgc:114095", "protein_names_uniprotkb": "RING finger protein 11", "protein_names_refseq": "RING finger protein 11b", "tax_id": 7955, "disease": "", "pathway": " (dre:100150568)", "pathway_count": 1, "publication_count": 3, "publication_id_list": "22609198;23175770;26469318", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC097155.1, GDQH01012538.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA4476730 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000008.1. On or before May 20, 2009 this sequence version replaced NP_001028905.1, XP_001919495.1., [RefSeq]; Essential component of a ubiquitin-editing protein complex, comprising also TNFAIP3, ITCH and TAX1BP1, that ensures the transient nature of inflammatory signaling pathways. Promotes the association of TNFAIP3 to RIPK1 after TNF stimulation. TNFAIP3 deubiquitinates 'Lys-63' polyubiquitin chains on RIPK1 and catalyzes the formation of 'Lys-48'-polyubiquitin chains. This leads to RIPK1 proteasomal degradation and consequently termination of the TNF- or LPS-mediated activation of NF-kappa-B. Recruits STAMBP to the E3 ubiquitin-ligase SMURF2 for ubiquitination, leading to its degradation by the 26S proteasome., [UniProtKB, UniProtKB]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NHK2", "ec_number_list": [], "go_molecular_function": "GO:0008270 zinc ion binding;GO:0061630 ubiquitin protein ligase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005769 early endosome;GO:0055037 recycling endosome;GO:0000151 ubiquitin ligase complex", "go_biological_process": "GO:0006511 ubiquitin-dependent protein catabolic process", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "B0V2S5-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "B0V2Y5-1", "uniprot_id": [ { "id": "B0V2Y5_DANRE", "url": "https://www.uniprot.org/uniprot/B0V2Y5", "type": "external" } ], "mass": 50703.0, "length": 436, "protein_name": "Glycosyltransferase family 92 protein", "gene_name": "si:dkey-56i24.1", "organism": "Zebrafish", "refseq_name": "glycosyltransferase family 92 protein", "refseq_ac": [ { "id": "NP_001116761", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001116761", "type": "external" } ], "gene_names_uniprotkb": "si:dkey-56i24.1; si:ch73-211l2.1", "gene_names_refseq": "si:dkey-56i24.1", "protein_names_uniprotkb": "Glycosyltransferase family 92 protein; 2.4.1.-", "protein_names_refseq": "glycosyltransferase family 92 protein", "tax_id": 7955, "disease": "", "pathway": " (dre:100334791); (dre:568129)", "pathway_count": 2, "publication_count": 1, "publication_id_list": "19959475", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: SRR32588721.1013036.1, DT877779.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505384, SAMEA4476738 [ECO:0000348] ##Evidence-Data-END## PREDICTED REFSEQ: This record has not been reviewed and the function is unknown. The reference sequence was derived from JBMGRA010000008.1. On Apr 11, 2008 this sequence version replaced XP_696534.2., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NG64;A0AC58G7X8", "ec_number_list": [], "go_molecular_function": "GO:0016757 glycosyltransferase activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0016020 membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "B0V2Y5-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "B0V349-1", "uniprot_id": [ { "id": "B0V349_DANRE", "url": "https://www.uniprot.org/uniprot/B0V349", "type": "external" } ], "mass": 24685.0, "length": 220, "protein_name": "Claudin", "gene_name": "cldn26", "organism": "Zebrafish", "refseq_name": "uncharacterized protein LOC793143", "refseq_ac": [ { "id": "NP_001116178", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001116178", "type": "external" } ], "gene_names_uniprotkb": "cldn26; cldn25-like; si:dkey-98f17.3", "gene_names_refseq": "cldn25-like; cldn26; si:dkey-98f17.3", "protein_names_uniprotkb": "Claudin", "protein_names_refseq": "uncharacterized protein LOC793143", "tax_id": 7955, "disease": "", "pathway": " (dre:793143)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "23726886", "class_list": "", "function": "##Evidence-Data-START## Transcript is intronless :: SRR26395062.1464684.1 [ECO:0000345] ##Evidence-Data-END## PREDICTED REFSEQ: This record has not been reviewed and the function is unknown. The reference sequence was derived from JBMGRA010000005.1. On Mar 17, 2008 this sequence version replaced XP_001332833.1., [RefSeq]; Claudins function as major constituents of the tight junction complexes that regulate the permeability of epithelia., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8N7UYT8", "ec_number_list": [], "go_molecular_function": "GO:0005198 structural molecule activity", "go_cellular_component": "GO:0005886 plasma membrane;GO:0005923 bicellular tight junction", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "B0V349-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "B0V362-1", "uniprot_id": [ { "id": "B0V362_DANRE", "url": "https://www.uniprot.org/uniprot/B0V362", "type": "external" } ], "mass": 39694.0, "length": 351, "protein_name": "Putative nuclease HARBI1", "gene_name": "harbi2", "organism": "Zebrafish", "refseq_name": "uncharacterized protein LOC560936", "refseq_ac": [ { "id": "NP_001122281", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001122281", "type": "external" } ], "gene_names_uniprotkb": "harbi2; fc62b10; wu:fc62b10; zgc:162945", "gene_names_refseq": "fc62b10; harbi2; wu:fc62b10; zgc:162945", "protein_names_uniprotkb": "Putative nuclease HARBI1; Harbinger transposase-derived nuclease", "protein_names_refseq": "putative nuclease HARBI1-like; uncharacterized protein LOC560936", "tax_id": 7955, "disease": "", "pathway": " (dre:560936)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "24465396", "class_list": "", "function": "Transposase-derived protein that may have nuclease activity. Does not have transposase activity., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NKV3", "ec_number_list": [], "go_molecular_function": "GO:0016787 hydrolase activity;GO:0046872 metal ion binding;GO:0004518 nuclease activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "B0V362-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "B0V3D2-1", "uniprot_id": [ { "id": "B0V3D2_DANRE", "url": "https://www.uniprot.org/uniprot/B0V3D2", "type": "external" } ], "mass": 17505.0, "length": 152, "protein_name": "Transcription factor HES-5", "gene_name": "her4.3", "organism": "Zebrafish", "refseq_name": "hairy-related 4, tandem duplicate 3", "refseq_ac": [ { "id": "NP_001154880", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001154880", "type": "external" } ], "gene_names_uniprotkb": "her4.3; her4.1; si:ch73-21g5.4; wu:fe26g04", "gene_names_refseq": "her4.1; her4.3; si:ch73-21g5.4; wu:fe26g04", "protein_names_uniprotkb": "Transcription factor HES-5; Hairy and enhancer of split 5", "protein_names_refseq": "hairy-related 4, tandem duplicate 3; hairy-related 4.1; hairy-related 4.3", "tax_id": 7955, "disease": "", "pathway": " (dre:792198)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "12117818;17013923;17134690;18776899;19084503;32697972;34033756;34325655;34331767;39419547", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC075740.1, EB865220.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000023.1. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications., [RefSeq]; Transcriptional repressor of genes that require a bHLH protein for their transcription. Plays an important role as neurogenesis negative regulator., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NUN1", "ec_number_list": [], "go_molecular_function": "GO:0046983 protein dimerization activity;GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding;GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0048936 peripheral nervous system neuron axonogenesis;GO:0000122 negative regulation of transcription by RNA polymerase II;GO:0006351 DNA-templated transcription;GO:0007219 Notch signaling pathway;GO:0009952 anterior/posterior pattern specification", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "B0V3D2-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "B0V3D3-1", "uniprot_id": [ { "id": "B0V3D3_DANRE", "url": "https://www.uniprot.org/uniprot/B0V3D3", "type": "external" } ], "mass": 17490.0, "length": 152, "protein_name": "Transcription factor HES-5", "gene_name": "her4.4", "organism": "Zebrafish", "refseq_name": "hairy-related 4, tandem duplicate 4", "refseq_ac": [ { "id": "NP_001121862", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001121862", "type": "external" } ], "gene_names_uniprotkb": "her4.4; si:ch73-21g5.5", "gene_names_refseq": "her4.4; si:ch73-21g5.5", "protein_names_uniprotkb": "Transcription factor HES-5; Hairy and enhancer of split 5", "protein_names_refseq": "hairy-related 4, tandem duplicate 4; hairy-related 4.2-like", "tax_id": 7955, "disease": "", "pathway": " (dre:100149066)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "12117818;19084503;22808219;25556858;26616101", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GW710422.1, EH589673.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505374, SAMEA3505375 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000023.1. On Jul 31, 2008 this sequence version replaced XP_001921302.1. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications., [RefSeq]; Transcriptional repressor of genes that require a bHLH protein for their transcription. Plays an important role as neurogenesis negative regulator., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NHI4", "ec_number_list": [], "go_molecular_function": "GO:0046983 protein dimerization activity;GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding;GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0000122 negative regulation of transcription by RNA polymerase II;GO:0006351 DNA-templated transcription;GO:0007219 Notch signaling pathway;GO:0009952 anterior/posterior pattern specification;GO:0030182 neuron differentiation", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "B0V3D3-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "B0VEQ2-1", "uniprot_id": [ { "id": "B0VEQ2_DANRE", "url": "https://www.uniprot.org/uniprot/B0VEQ2", "type": "external" } ], "mass": 27469.0, "length": 249, "protein_name": "Tetraspanin", "gene_name": "tspan7", "organism": "Zebrafish", "refseq_name": "tetraspanin-7", "refseq_ac": [ { "id": "NP_001124290", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001124290", "type": "external" } ], "gene_names_uniprotkb": "tspan7; tm4sf2b; tspan7b; wu:fb53h11; zgc:92829", "gene_names_refseq": "tm4sf2b; tspan7b; tspan7; wu:fb53h11; zgc:92829", "protein_names_uniprotkb": "Tetraspanin", "protein_names_refseq": "tetraspanin 7b; tetraspanin-7", "tax_id": 7955, "disease": "non-syndromic X-linked intellectual disability 58 (Disease Ontology:DOID:0112024)", "pathway": " (dre:449539); (R-DRE-416993)", "pathway_count": 2, "publication_count": 6, "publication_id_list": "16109975;22286130;26469318;27189481;28252024;31307377", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC081682.1, SRR32588728.22253815.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505373 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000022.1. On or before Jan 22, 2009 this sequence version replaced NP_001005581.1, XP_001922653.1., [RefSeq]; May be involved in cell proliferation and cell motility., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NIF9", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "B0VEQ2-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "B3DJK0-1", "uniprot_id": [ { "id": "TM160_DANRE", "url": "https://www.uniprot.org/uniprot/B3DJK0", "type": "external" } ], "mass": 23214.0, "length": 208, "protein_name": "Transmembrane protein 160", "gene_name": "tmem160", "organism": "Zebrafish", "refseq_name": "transmembrane protein 160", "refseq_ac": [ { "id": "NP_001122172", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001122172", "type": "external" } ], "gene_names_uniprotkb": "tmem160; si:ch211-113p18.5", "gene_names_refseq": "si:ch211-113p18.5; tmem160", "protein_names_uniprotkb": "Transmembrane protein 160", "protein_names_refseq": "transmembrane protein 160", "tax_id": 7955, "disease": "", "pathway": " (dre:559491)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC163511.1, EH536142.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC163511.1. On Jul 31, 2008 this sequence version replaced XP_687927.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005743 mitochondrial inner membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "B3DJK0-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "B3DK16-1", "uniprot_id": [ { "id": "PCF5A_DANRE", "url": "https://www.uniprot.org/uniprot/B3DK16", "type": "external" } ], "mass": 27030.0, "length": 234, "protein_name": "Polycomb group RING finger protein 5-A", "gene_name": "pcgf5a", "organism": "Zebrafish", "refseq_name": "polycomb group RING finger protein 5-A", "refseq_ac": [ { "id": "NP_001122184", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001122184", "type": "external" } ], "gene_names_uniprotkb": "pcgf5a; zgc:194668; zgc:194700", "gene_names_refseq": "pcgf5a; zgc:194668; zgc:194700", "protein_names_uniprotkb": "Polycomb group RING finger protein 5-A", "protein_names_refseq": "polycomb group RING finger protein 5-A", "tax_id": 7955, "disease": "", "pathway": " (dre:562327)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC163687.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505372 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC163702.1. On Jul 31, 2008 this sequence version replaced XP_690808.2., [RefSeq]; Component of Polycomb group (PcG) multiprotein complexes; the complex class is required to maintain the transcriptionally repressive state of some genes., [UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0008270 zinc ion binding", "go_cellular_component": "GO:0031519 PcG protein complex;GO:0035102 PRC1 complex", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006357 regulation of transcription by RNA polymerase II;GO:0007399 nervous system development", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "B3DK16-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "B7TWP7-1", "uniprot_id": [ { "id": "PNRC2_DANRE", "url": "https://www.uniprot.org/uniprot/B7TWP7", "type": "external" } ], "mass": 16285.0, "length": 148, "protein_name": "Proline-rich nuclear receptor coactivator 2", "gene_name": "pnrc2", "organism": "Zebrafish", "refseq_name": "proline-rich nuclear receptor coactivator 2", "refseq_ac": [ { "id": "NP_001123664", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001123664", "type": "external" } ], "gene_names_uniprotkb": "pnrc2", "gene_names_refseq": "fb81a06; pnrc2; wu:cegs2777; wu:fb51a04; wu:fb81a06; wu:fd19g06", "protein_names_uniprotkb": "Proline-rich nuclear receptor coactivator 2", "protein_names_refseq": "proline-rich nuclear receptor coactivator 2", "tax_id": 7955, "disease": "", "pathway": " (dre:565522); (R-DRE-975957)", "pathway_count": 2, "publication_count": 3, "publication_id_list": "19166982;28648842;32246943", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GDQH01001654.1, BC139660.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505388, SAMEA4476735 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000016.1. On Jul 31, 2008 this sequence version replaced XP_693894.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]; Involved in nonsense-mediated mRNA decay (NMD) by acting as a bridge between the mRNA decapping complex and the NMD machinery. May act by targeting the NMD machinery to the P-body and recruiting the decapping machinery to aberrant mRNAs. Required for upf1/rent1 localization to the P-body. Also acts as a nuclear receptor coactivator (By similarity)., [UniProtKB]; Pnrc2 promotes 3'UTR-mediated decay of developmentally-regulated segmentation clock transcripts., [RefSeq, PubMed]; Pumilio response and AU-rich elements drive rapid decay of Pnrc2-regulated cyclic gene transcripts., [RefSeq, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005634 nucleus;GO:0000932 P-body", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay;GO:0000956 nuclear-transcribed mRNA catabolic process", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "B7TWP7-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "B7ZD15-1", "uniprot_id": [ { "id": "B7ZD15_DANRE", "url": "https://www.uniprot.org/uniprot/B7ZD15", "type": "external" } ], "mass": 55236.0, "length": 485, "protein_name": "Olfactomedin 1b isoform 1", "gene_name": "olfm1b", "organism": "Zebrafish", "refseq_name": "olfactomedin 1b isoform 1", "refseq_ac": [ { "id": "NP_001315343", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001315343", "type": "external" } ], "gene_names_uniprotkb": "olfm1b; si:ch211-11g18.1; wu:fd59h02; zgc:92039", "gene_names_refseq": "olfm1b; si:ch211-11g18.1; wu:fd59h02; zgc:92039", "protein_names_uniprotkb": "Olfactomedin 1b isoform 1", "protein_names_refseq": "olfactomedin 1b isoform 1", "tax_id": 7955, "disease": "", "pathway": "", "pathway_count": 0, "publication_count": 10, "publication_id_list": "16631158;17681890;18667622;21052758;21965609;27189481;27605615;28252024;28975619;30060229", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GFIL01020909.1, SRR32588727.1978751.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000021.1, EH589925.1, EH493055.1, EH510545.1 and EH532081.1. On Jun 16, 2016 this sequence version replaced XP_005161064.1. Transcript Variant: This variant (1) encodes the longest isoform (1). Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications., [RefSeq]; Olfm1 may regulate receptor trafficking from the intracellular compartments to the synaptic membrane microdomain, [RefSeq, PubMed]; Variants of olfm1 mRNA are present mainly in neurogenic zebrafish tissues and demonstrated overlapping expression patterns, [RefSeq, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1P3V0", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005615 extracellular space;GO:0045202 synapse;GO:0005576 extracellular region", "go_biological_process": "GO:0007165 signal transduction", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "B7ZD15-1", "record_type": "protein", "filter_code": "0000000.0000100.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "B7ZD71-1", "uniprot_id": [ { "id": "B7ZD71_DANRE", "url": "https://www.uniprot.org/uniprot/B7ZD71", "type": "external" } ], "mass": 26721.0, "length": 238, "protein_name": "H6 family homeobox 4", "gene_name": "hmx4", "organism": "Zebrafish", "refseq_name": "H6 family homeobox 4", "refseq_ac": [ { "id": "NP_001038836", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001038836", "type": "external" } ], "gene_names_uniprotkb": "hmx4; Hmx1; soho; wu:fc21b03; zgc:154104", "gene_names_refseq": "Hmx1; hmx4; soho; wu:fc21b03; zgc:154104", "protein_names_uniprotkb": "H6 family homeobox 4", "protein_names_refseq": "H6 family homeobox 4; hmx3b; homeobox transcription factor; zfSOHo", "tax_id": 7955, "disease": "", "pathway": " (dre:751654)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "11466530;17236135;17634100;20043901;20112453;27392729;30009987;33077489;34698769;37227126", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC122454.1, CN502217.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505373, SAMEA3505388 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC122454.1. On Oct 12, 2007 this sequence version replaced NP_001038836.1. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications., [RefSeq]; Transcription factor involved in specification of neuronal cell types and which is required for inner ear and hypothalamus development. Binds to the 5'-CAAGTG-3' core sequence., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1N9F2", "ec_number_list": [], "go_molecular_function": "GO:0000977 RNA polymerase II transcription regulatory region sequence-specific DNA binding;GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006357 regulation of transcription by RNA polymerase II;GO:0007399 nervous system development;GO:0030154 cell differentiation;GO:1900052 regulation of retinoic acid biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "B7ZD71-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "B7ZD94-1", "uniprot_id": [ { "id": "B7ZD94_DANRE", "url": "https://www.uniprot.org/uniprot/B7ZD94", "type": "external" } ], "mass": 93046.0, "length": 816, "protein_name": "BEN domain-containing protein 3", "gene_name": "bend3", "organism": "Zebrafish", "refseq_name": "BEN domain-containing protein 3", "refseq_ac": [ { "id": "NP_001139063", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001139063", "type": "external" } ], "gene_names_uniprotkb": "bend3; si:ch211-206k20.6", "gene_names_refseq": "bend3; si:ch211-206k20.6", "protein_names_uniprotkb": "BEN domain-containing protein 3", "protein_names_refseq": "BEN domain-containing protein 3", "tax_id": 7955, "disease": "", "pathway": " (dre:565716)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "26469318", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: SRR26395017.246447.1, SRR26395039.80811.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505378, SAMEA3505390 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000013.1. On Mar 5, 2009 this sequence version replaced XP_001923103.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NQ46", "ec_number_list": [], "go_molecular_function": "GO:0000182 rDNA binding", "go_cellular_component": "GO:0000792 heterochromatin", "go_biological_process": "GO:0000122 negative regulation of transcription by RNA polymerase II;GO:0000183 rDNA heterochromatin formation", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "B7ZD94-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "B7ZDB5-1", "uniprot_id": [ { "id": "B7ZDB5_DANRE", "url": "https://www.uniprot.org/uniprot/B7ZDB5", "type": "external" } ], "mass": 42324.0, "length": 374, "protein_name": "Biglycan", "gene_name": "bgnb", "organism": "Zebrafish", "refseq_name": "biglycan b precursor", "refseq_ac": [ { "id": "NP_001001825", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001001825", "type": "external" } ], "gene_names_uniprotkb": "bgnb; bgn; zgc:77123", "gene_names_refseq": "bgnb; bgn; zgc:77123", "protein_names_uniprotkb": "Biglycan", "protein_names_refseq": "biglycan b precursor", "tax_id": 7955, "disease": "Meester-Loeys syndrome (Disease Ontology:DOID:0111861); X-linked spondyloepimetaphyseal dysplasia (Disease Ontology:DOID:0112150); stomach cancer (Disease Ontology:DOID:10534)", "pathway": " (dre:792197); (R-DRE-1971475); (R-DRE-2022870); (R-DRE-2022923); (R-DRE-2024101)", "pathway_count": 5, "publication_count": 5, "publication_id_list": "15520368;22869369;28096348;34099692;37884489", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC066415.1, BC059632.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505389, SAMEA4476732 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AL953864.6 and BX323050.6. On Apr 23, 2008 this sequence version replaced NP_001001825.1., [RefSeq]; May be involved in collagen fiber assembly., [UniProtKB, UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 3, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1MZN9", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005615 extracellular space", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "B7ZDB5-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "B8A458-1", "uniprot_id": [ { "id": "B8A458_DANRE", "url": "https://www.uniprot.org/uniprot/B8A458", "type": "external" } ], "mass": 60422.0, "length": 539, "protein_name": "Peroxisomal N(1)-acetyl-spermine/spermidine oxidase", "gene_name": "smox", "organism": "Zebrafish", "refseq_name": "spermine oxidase", "refseq_ac": [ { "id": "NP_001315115", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001315115", "type": "external" } ], "gene_names_uniprotkb": "smox; cb1027; wu:fq32f10; zgc:77167", "gene_names_refseq": "cb1027; smox; wu:fq32f10; zgc:77167", "protein_names_uniprotkb": "Peroxisomal N(1)-acetyl-spermine/spermidine oxidase; 1.5.3.13; Polyamine oxidase", "protein_names_refseq": "spermine oxidase", "tax_id": 7955, "disease": "", "pathway": " (dre:387290); (R-DRE-141334); (R-DRE-351200)", "pathway_count": 3, "publication_count": 10, "publication_id_list": "21571218;22438865;23180778;25533206;26469318;27189481;29228146;32366533;32937161;38806677", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GDQQ01035399.1, BC066413.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000001.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1PA21", "ec_number_list": [ { "id": "1.5.3.13", "url": "https://www.rhea-db.org/rhea/?query=ec:1.5.3.13", "type": "external" } ], "go_molecular_function": "GO:0046592 polyamine oxidase activity;GO:0052903 N(1)-acetylpolyamine oxidase (3-acetamidopropanal-forming) activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005777 peroxisome", "go_biological_process": "GO:0030097 hemopoiesis;GO:0046208 spermine catabolic process", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "B8A458-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "B8A492-1", "uniprot_id": [ { "id": "B8A492_DANRE", "url": "https://www.uniprot.org/uniprot/B8A492", "type": "external" } ], "mass": 13194.0, "length": 144, "protein_name": "Interferon alpha inducible protein 27.4", "gene_name": "ifi27.4", "organism": "Zebrafish", "refseq_name": "interferon alpha inducible protein 27.4", "refseq_ac": [ { "id": "NP_001278862", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001278862", "type": "external" } ], "gene_names_uniprotkb": "ifi27.4; ifi46; isg12-4; isg12.4; si:dkey-188i13.7; uo:ion004", "gene_names_refseq": "ifi27.4; ifi46; isg12-4; isg12.4; si:dkey-188i13.7; uo:ion004", "protein_names_uniprotkb": "Interferon alpha inducible protein 27.4", "protein_names_refseq": "interferon alpha inducible protein 27.4; interferon alpha inducible protein 46; interferon alpha-inducible protein 27-like", "tax_id": 7955, "disease": "", "pathway": " (dre:100302471); (R-DRE-9909505)", "pathway_count": 2, "publication_count": 6, "publication_id_list": "19166982;24683187;26469318;27189481;28698226;31732531", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: EH442565.1, EH539291.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505384, SAMEA4476733 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from EH544590.1 and CO925836.1. On May 10, 2014 this sequence version replaced XP_003199785.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1P5N4", "ec_number_list": [], "go_molecular_function": "GO:0060090 molecular adaptor activity", "go_cellular_component": "GO:0031966 mitochondrial membrane", "go_biological_process": "GO:0097193 intrinsic apoptotic signaling pathway", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "B8A492-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "B8A4C9-1", "uniprot_id": [ { "id": "B8A4C9_DANRE", "url": "https://www.uniprot.org/uniprot/B8A4C9", "type": "external" } ], "mass": 14143.0, "length": 128, "protein_name": "Cystatin C (Amyloid angiopathy and cerebral hemorrhage) precursor", "gene_name": "cst3", "organism": "Zebrafish", "refseq_name": "cystatin C (amyloid angiopathy and cerebral hemorrhage) precursor", "refseq_ac": [ { "id": "NP_001026843", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001026843", "type": "external" } ], "gene_names_uniprotkb": "cst3; fb51d07; wu:fb24g06; wu:fb51d07; wu:fc55f03; zgc:136227", "gene_names_refseq": "cst3; fb51d07; wu:fb24g06; wu:fb51d07; wu:fc55f03; zgc:136227", "protein_names_uniprotkb": "Cystatin C (Amyloid angiopathy and cerebral hemorrhage) precursor", "protein_names_refseq": "cystatin C (amyloid angiopathy and cerebral hemorrhage) precursor", "tax_id": 7955, "disease": "left ventricular failure (Disease Ontology:DOID:0051064); CST3-related cerebral amyloid angiopathy (Disease Ontology:DOID:0070027); age related macular degeneration 11 (Disease Ontology:DOID:0110023); pre-eclampsia (Disease Ontology:DOID:10591); Alzheimer's disease (Disease Ontology:DOID:10652); intracranial aneurysm (Disease Ontology:DOID:10941); Guillain-Barre syndrome (Disease Ontology:DOID:12842); polyneuropathy (Disease Ontology:DOID:1389); brain ischemia (Disease Ontology:DOID:2316); multiple sclerosis (Disease Ontology:DOID:2377); chronic obstructive pulmonary disease (Disease Ontology:DOID:3083); coronary artery disease (Disease Ontology:DOID:3393); peripheral vascular disease (Disease Ontology:DOID:341); kidney disease (Disease Ontology:DOID:557); congestive heart failure (Disease Ontology:DOID:6000); type 2 diabetes mellitus (Disease Ontology:DOID:9352); pulmonary emphysema (Disease Ontology:DOID:9675); obesity (Disease Ontology:DOID:9970)", "pathway": " (dre:791878); (R-DRE-381426); (R-DRE-6798695); (R-DRE-8957275)", "pathway_count": 4, "publication_count": 6, "publication_id_list": "19389629;25867923;26469318;30157643;32709934;33881846", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: EB868200.1, BC117569.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from EB868200.1 and EH523905.1. On Mar 21, 2009 this sequence version replaced NP_001026843.1., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 18, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1N7I0", "ec_number_list": [], "go_molecular_function": "GO:0004869 cysteine-type endopeptidase inhibitor activity", "go_cellular_component": "GO:0005615 extracellular space;GO:0005737 cytoplasm;GO:0031982 vesicle", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "B8A4C9-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "B8A4D2-1", "uniprot_id": [ { "id": "B8A4D2_DANRE", "url": "https://www.uniprot.org/uniprot/B8A4D2", "type": "external" } ], "mass": 14526.0, "length": 128, "protein_name": "Cystatin-like precursor", "gene_name": "im:7157354", "organism": "Zebrafish", "refseq_name": "Cystatin-like precursor", "refseq_ac": [ { "id": "NP_001082882", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001082882", "type": "external" } ], "gene_names_uniprotkb": "im:7157354; zgc:163030", "gene_names_refseq": "im:7157354; zgc:163030", "protein_names_uniprotkb": "Cystatin-like precursor", "protein_names_refseq": "Cystatin-like precursor; cystatin C-like", "tax_id": 7955, "disease": "", "pathway": " (dre:566959)", "pathway_count": 1, "publication_count": 3, "publication_id_list": "26469318;27189481;34099692", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: EH555791.1, EH540897.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA4476771, SAMEA4476791 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from EH556487.1 and EH555791.1. On Aug 11, 2011 this sequence version replaced NP_001082882.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1ND27", "ec_number_list": [], "go_molecular_function": "GO:0004869 cysteine-type endopeptidase inhibitor activity", "go_cellular_component": "GO:0005615 extracellular space;GO:0005737 cytoplasm;GO:0031982 vesicle", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "B8A4D2-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "B8A4F2-1", "uniprot_id": [ { "id": "B8A4F2_DANRE", "url": "https://www.uniprot.org/uniprot/B8A4F2", "type": "external" } ], "mass": 36158.0, "length": 321, "protein_name": "protein-histidine N-methyltransferase", "gene_name": "mettl18", "organism": "Zebrafish", "refseq_name": "histidine protein methyltransferase 1 homolog", "refseq_ac": [ { "id": "NP_001139089", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001139089", "type": "external" } ], "gene_names_uniprotkb": "mettl18; si:dkey-15f17.8", "gene_names_refseq": "mettl18; si:dkey-15f17.8", "protein_names_uniprotkb": "protein-histidine N-methyltransferase; 2.1.1.85", "protein_names_refseq": "C1orf156-like; histidine protein methyltransferase 1 homolog; methyltransferase like 18", "tax_id": 7955, "disease": "", "pathway": " (dre:796750)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "27189481", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GDQH01006925.1, GDQQ01000349.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000013.1. On Mar 5, 2009 this sequence version replaced XP_001337137.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NQ76", "ec_number_list": [], "go_molecular_function": "GO:0018064 protein-L-histidine N-tele-methyltransferase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm", "go_biological_process": "GO:0006417 regulation of translation;GO:0032259 methylation", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "B8A4F2-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "B8A4G8-1", "uniprot_id": [ { "id": "B8A4G8_DANRE", "url": "https://www.uniprot.org/uniprot/B8A4G8", "type": "external" } ], "mass": 51560.0, "length": 451, "protein_name": "Tektin", "gene_name": "tekt4", "organism": "Zebrafish", "refseq_name": "tektin-4", "refseq_ac": [ { "id": "NP_001139162", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001139162", "type": "external" } ], "gene_names_uniprotkb": "tekt4; zgc:162848", "gene_names_refseq": "tekt4; zgc:162848", "protein_names_uniprotkb": "Tektin", "protein_names_refseq": "tektin-4", "tax_id": 7955, "disease": "", "pathway": " (dre:559407)", "pathway_count": 1, "publication_count": 3, "publication_id_list": "26469318;27189481;32307628", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC117579.1, GFIL01045818.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505371, SAMEA3505372 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000001.1. On or before Jun 13, 2009 this sequence version replaced NP_001082987.1, XP_687839.2., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NTB8", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0015630 microtubule cytoskeleton;GO:0036126 sperm flagellum;GO:0005930 axoneme", "go_biological_process": "GO:0060294 cilium movement involved in cell motility;GO:0060271 cilium assembly", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "B8A4G8-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "B8A4G9-1", "uniprot_id": [ { "id": "B8A4G9_DANRE", "url": "https://www.uniprot.org/uniprot/B8A4G9", "type": "external" } ], "mass": 15702.0, "length": 140, "protein_name": "Uncharacterized protein LOC559480", "gene_name": "si:ch211-202h22.9", "organism": "Zebrafish", "refseq_name": "uncharacterized protein LOC559480", "refseq_ac": [ { "id": "NP_001139042", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001139042", "type": "external" } ], "gene_names_uniprotkb": "si:ch211-202h22.9; fb60g05; wu:fb60g05", "gene_names_refseq": "fb60g05; si:ch211-202h22.9; wu:fb60g05", "protein_names_uniprotkb": "Uncharacterized protein LOC559480", "protein_names_refseq": "lipopolysaccharide-induced tumor necrosis factor-alpha factor-like; uncharacterized protein LOC559480", "tax_id": 7955, "disease": "", "pathway": " (dre:559480)", "pathway_count": 1, "publication_count": 3, "publication_id_list": "12477932;21873635;36291156", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: EH484927.1, EH502796.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from EH484927.1 and EH507748.1. On Mar 5, 2009 this sequence version replaced XP_687915.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NTA6", "ec_number_list": [], "go_molecular_function": "GO:0008270 zinc ion binding", "go_cellular_component": "GO:0005634 nucleus;GO:0098574 cytoplasmic side of lysosomal membrane;GO:0098560 cytoplasmic side of late endosome membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "B8A4G9-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "B8A4H0-1", "uniprot_id": [ { "id": "B8A4H0_DANRE", "url": "https://www.uniprot.org/uniprot/B8A4H0", "type": "external" } ], "mass": 15190.0, "length": 137, "protein_name": "Lipopolysaccharide-induced tumor necrosis factor-alpha factor homolog-like", "gene_name": "si:ch211-202h22.8", "organism": "Zebrafish", "refseq_name": "Lipopolysaccharide-induced tumor necrosis factor-alpha factor homolog-like", "refseq_ac": [ { "id": "NP_001278864", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001278864", "type": "external" } ], "gene_names_uniprotkb": "si:ch211-202h22.8", "gene_names_refseq": "si:ch211-202h22.8", "protein_names_uniprotkb": "Lipopolysaccharide-induced tumor necrosis factor-alpha factor homolog-like", "protein_names_refseq": "Lipopolysaccharide-induced tumor necrosis factor-alpha factor homolog-like; lipopolysaccharide-induced tumor necrosis factor-alpha factor-like", "tax_id": 7955, "disease": "", "pathway": " (dre:559550)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "26469318", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC122436.1, DV590696.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505372, SAMEA3505375 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000001.1. On May 10, 2014 this sequence version replaced XP_005160237.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1P677", "ec_number_list": [], "go_molecular_function": "GO:0008270 zinc ion binding", "go_cellular_component": "GO:0005634 nucleus;GO:0098574 cytoplasmic side of lysosomal membrane;GO:0098560 cytoplasmic side of late endosome membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "B8A4H0-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "B8A4J0-1", "uniprot_id": [ { "id": "B8A4J0_DANRE", "url": "https://www.uniprot.org/uniprot/B8A4J0", "type": "external" } ], "mass": 20478.0, "length": 182, "protein_name": "Securin", "gene_name": "pttg1", "organism": "Zebrafish", "refseq_name": "securin", "refseq_ac": [ { "id": "NP_001258403", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001258403", "type": "external" } ], "gene_names_uniprotkb": "pttg1; si:ch211-232m8.6; si:dkey-192o1.2; si:dkey-23o10.2", "gene_names_refseq": "pttg1; si:ch211-232m8.6; si:dkey-192o1.2; si:dkey-23o10.2", "protein_names_uniprotkb": "Securin", "protein_names_refseq": "pituitary tumor-transforming 1; securin", "tax_id": 7955, "disease": "", "pathway": " (dre:100307086); (R-DRE-174154); (R-DRE-174178); (R-DRE-2467813)", "pathway_count": 4, "publication_count": 5, "publication_id_list": "21249182;21536883;27189481;29609551;31310986", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: EH566011.1, EH544882.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000014.1. On Jun 25, 2025 this sequence version replaced NP_001258403.1. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1P437", "ec_number_list": [], "go_molecular_function": "GO:0017124 SH3 domain binding;GO:0004869 cysteine-type endopeptidase inhibitor activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm", "go_biological_process": "GO:0045143 homologous chromosome segregation;GO:0051301 cell division;GO:0051276 chromosome organization", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "B8A4J0-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "B8A4M2-1", "uniprot_id": [ { "id": "B8A4M2_DANRE", "url": "https://www.uniprot.org/uniprot/B8A4M2", "type": "external" } ], "mass": 15550.0, "length": 143, "protein_name": "Transmembrane protein 234 isoform 1 precursor", "gene_name": "tmem234", "organism": "Zebrafish", "refseq_name": "transmembrane protein 234 isoform 1 precursor", "refseq_ac": [ { "id": "NP_001230080", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001230080", "type": "external" } ], "gene_names_uniprotkb": "tmem234; si:dkey-71p21.12", "gene_names_refseq": "si:dkey-71p21.12; tmem234", "protein_names_uniprotkb": "Transmembrane protein 234 isoform 1 precursor", "protein_names_refseq": "transmembrane protein 234 isoform 1 precursor", "tax_id": 7955, "disease": "", "pathway": " (dre:568275)", "pathway_count": 1, "publication_count": 3, "publication_id_list": "26377798;26469318;27189481", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: EH478602.1, GFIL01041106.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000013.1, EH452818.1 and EH475273.1. On Jul 30, 2011 this sequence version replaced XP_696687.1. Transcript Variant: This variant represents the shortest transcript and encodes isoform 1. Variants 1 and 2 encode the same protein., [RefSeq]; Tmem234 is essential for the normal filtration barrier in the zebrafish pronephric glomerulus., [RefSeq, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1P312", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0016020 membrane", "go_biological_process": "GO:0003094 glomerular filtration;GO:0039021 pronephric glomerulus development", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "B8A4M2-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "B8A4N0-1", "uniprot_id": [ { "id": "B8A4N0_DANRE", "url": "https://www.uniprot.org/uniprot/B8A4N0", "type": "external" } ], "mass": 21936.0, "length": 196, "protein_name": "Protein Mis18-beta", "gene_name": "oip5", "organism": "Zebrafish", "refseq_name": "protein Mis18-beta", "refseq_ac": [ { "id": "NP_001139092", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001139092", "type": "external" } ], "gene_names_uniprotkb": "oip5; si:dkey-71p21.8", "gene_names_refseq": "oip5; si:dkey-71p21.8", "protein_names_uniprotkb": "Protein Mis18-beta", "protein_names_refseq": "protein Mis18-beta", "tax_id": 7955, "disease": "", "pathway": " (dre:799087)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "19278998;27189481", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: EH571487.1, EH550362.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505372, SAMEA3505375 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000013.1. On Mar 5, 2009 this sequence version replaced XP_001339482.1., [RefSeq]; Required for recruitment of CENPA to centromeres and normal chromosome segregation during mitosis., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8N7UZ97;A0AC58H2B0", "ec_number_list": [], "go_molecular_function": "GO:0046872 metal ion binding", "go_cellular_component": "GO:0005634 nucleus;GO:0000775 chromosome, centromeric region;GO:0000785 chromatin", "go_biological_process": "GO:0051301 cell division;GO:0034080 CENP-A containing chromatin assembly", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "B8A4N0-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "B8A4P8-1", "uniprot_id": [ { "id": "B8A4P8_DANRE", "url": "https://www.uniprot.org/uniprot/B8A4P8", "type": "external" } ], "mass": 29954.0, "length": 270, "protein_name": "NK1 transcription factor related 2-like,a", "gene_name": "nkx1.2la", "organism": "Zebrafish", "refseq_name": "NK1 transcription factor related 2-like,a", "refseq_ac": [ { "id": "NP_997995", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_997995", "type": "external" } ], "gene_names_uniprotkb": "nkx1.2la; sax1; zgc:101023; zsax1", "gene_names_refseq": "nkx1.2la; sax1; zgc:101023; zsax1", "protein_names_uniprotkb": "NK1 transcription factor related 2-like,a", "protein_names_refseq": "NK1 transcription factor related 2-like,a; homeobox protein Sax1", "tax_id": 7955, "disease": "", "pathway": " (dre:405755)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "12642490;15183316;20112453;20463883;25534026;29914374;30252882;34331767;37850839;38798028", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC076418.1, CK687976.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA4476735, SAMEA4476746 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000013.1 and CT721252.2. On or before Jun 13, 2015 this sequence version replaced XP_005157116.1, NP_997995.1. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications., [RefSeq]; Expressed in the prospective medial floor plate from the mid-gastrula period and dependent on Nodal signaling, [RefSeq, PubMed]; Nkx1.2 deletion decreases fat production in zebrafish., [RefSeq, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8N7V0C0;A0AC58H0S6", "ec_number_list": [], "go_molecular_function": "GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding;GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006357 regulation of transcription by RNA polymerase II;GO:0030154 cell differentiation;GO:0046889 positive regulation of lipid biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "B8A4P8-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "B8A4R1-1", "uniprot_id": [ { "id": "B8A4R1_DANRE", "url": "https://www.uniprot.org/uniprot/B8A4R1", "type": "external" } ], "mass": 58410.0, "length": 531, "protein_name": "RCC1 and BTB domain-containing protein 1 isoform X1", "gene_name": "rcbtb1", "organism": "Zebrafish", "refseq_name": "RCC1 and BTB domain-containing protein 1 isoform X1", "refseq_ac": [ { "id": "XP_005171027", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005171027", "type": "external" } ], "gene_names_uniprotkb": "rcbtb1; fj43a07; wu:fj43a07; zgc:56037", "gene_names_refseq": "fj43a07; rcbtb1; wu:fj43a07; zgc:56037", "protein_names_uniprotkb": "RCC1 and BTB domain-containing protein 1 isoform X1", "protein_names_refseq": "RCC1 and BTB domain-containing protein 1 isoform X1", "tax_id": 7955, "disease": "childhood-onset asthma (Disease Ontology:DOID:0080815); allergic disease (Disease Ontology:DOID:1205)", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133176) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 2, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M2BI84", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "GO:0001568 blood vessel development;GO:0061298 retina vasculature development in camera-type eye", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "B8A4R1-1", "record_type": "protein", "filter_code": "0000000.0000010.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "B8A4V4-1", "uniprot_id": [ { "id": "B8A4V4_DANRE", "url": "https://www.uniprot.org/uniprot/B8A4V4", "type": "external" } ], "mass": 51022.0, "length": 446, "protein_name": "WD repeat-containing protein WRAP73", "gene_name": "wrap73", "organism": "Zebrafish", "refseq_name": "WD repeat-containing protein WRAP73", "refseq_ac": [ { "id": "NP_001315466", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001315466", "type": "external" } ], "gene_names_uniprotkb": "wrap73; fi45a07; wdr8; wu:fi45a07; zgc:56287", "gene_names_refseq": "fi45a07; wdr8; wrap73; wu:fi45a07; zgc:56287", "protein_names_uniprotkb": "WD repeat-containing protein WRAP73", "protein_names_refseq": "WD repeat domain 8; WD repeat-containing protein WRAP73", "tax_id": 7955, "disease": "", "pathway": " (dre:334381)", "pathway_count": 1, "publication_count": 3, "publication_id_list": "26469318;27189481;33693649", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC154787.1, GFIL01043400.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000008.1 and EH448229.1. On Jun 17, 2016 this sequence version replaced XP_005167350.1. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1PAF2;A0AC58G6A3", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005815 microtubule organizing center;GO:1990811 MWP complex", "go_biological_process": "GO:0010842 retina layer formation;GO:0002088 lens development in camera-type eye;GO:1990810 microtubule anchoring at mitotic spindle pole body", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "B8A4V4-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "B8A4X3-1", "uniprot_id": [ { "id": "B8A4X3_DANRE", "url": "https://www.uniprot.org/uniprot/B8A4X3", "type": "external" } ], "mass": 52418.0, "length": 477, "protein_name": "Developmental arteries and neural crest EGF-like protein", "gene_name": "fbln5", "organism": "Zebrafish", "refseq_name": "fibulin-5 isoform X1", "refseq_ac": [ { "id": "XP_005156878", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005156878", "type": "external" } ], "gene_names_uniprotkb": "fbln5; zgc:103575", "gene_names_refseq": "fbln5; zgc:103575", "protein_names_uniprotkb": "Developmental arteries and neural crest EGF-like protein", "protein_names_refseq": "fibulin-5 isoform X1", "tax_id": 7955, "disease": "autosomal recessive cutis laxa type IA (Disease Ontology:DOID:0070135); autosomal dominant cutis laxa 2 (Disease Ontology:DOID:0070136); Charcot-Marie-Tooth disease (Disease Ontology:DOID:10595); age related macular degeneration (Disease Ontology:DOID:10871); cutis laxa (Disease Ontology:DOID:3144)", "pathway": " (dre:449806); (R-DRE-2129379)", "pathway_count": 2, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133188) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 5, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M2B2Z6", "ec_number_list": [], "go_molecular_function": "GO:0005509 calcium ion binding", "go_cellular_component": "GO:0005615 extracellular space;GO:0031012 extracellular matrix", "go_biological_process": "GO:0022011 myelination in peripheral nervous system;GO:0048251 elastic fiber assembly;GO:0048932 myelination of posterior lateral line nerve axons", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "B8A4X3-1", "record_type": "protein", "filter_code": "0000000.0000011.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "B8A4X8-1", "uniprot_id": [ { "id": "B8A4X8_DANRE", "url": "https://www.uniprot.org/uniprot/B8A4X8", "type": "external" } ], "mass": 17819.0, "length": 155, "protein_name": "Paired like homeobox 2Ba", "gene_name": "phox2ba", "organism": "Zebrafish", "refseq_name": "paired like homeobox 2Ba", "refseq_ac": [ { "id": "NP_001139175", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001139175", "type": "external" } ], "gene_names_uniprotkb": "phox2ba; si:ch211-157h5.5", "gene_names_refseq": "phox2ba; si:ch211-157h5.5", "protein_names_uniprotkb": "Paired like homeobox 2Ba", "protein_names_refseq": "paired like homeobox 2Ba", "tax_id": 7955, "disease": "congenital central hypoventilation syndrome (Disease Ontology:DOID:0060731); neuroblastoma (Disease Ontology:DOID:769); colorectal cancer (Disease Ontology:DOID:9256)", "pathway": " (dre:795258)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "18335061;32533114;35111746;36117635;37239446", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: SRR32588720.2377435.1, SRR32588717.21575322.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505381, SAMEA4476728 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000001.1. On Dec 3, 2025 this sequence version replaced NP_001139175.1., [RefSeq]; Phox2ba: The Potential Genetic Link behind the Overlap in the Symptomatology between CHARGE and Central Congenital Hypoventilation Syndromes. Publication Status: Online-Only, [RefSeq, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 3, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8N7UZA0", "ec_number_list": [], "go_molecular_function": "GO:0000977 RNA polymerase II transcription regulatory region sequence-specific DNA binding;GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006357 regulation of transcription by RNA polymerase II;GO:0048666 neuron development;GO:0002027 regulation of heart rate", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "B8A4X8-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "B8A500-1", "uniprot_id": [ { "id": "B8A500_DANRE", "url": "https://www.uniprot.org/uniprot/B8A500", "type": "external" } ], "mass": 58790.0, "length": 505, "protein_name": "Zinc finger-like gene 1g", "gene_name": "znfl1g", "organism": "Zebrafish", "refseq_name": "zinc finger-like gene 1g", "refseq_ac": [ { "id": "NP_001139173", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001139173", "type": "external" } ], "gene_names_uniprotkb": "znfl1g; si:ch211-168h21.3", "gene_names_refseq": "si:ch211-168h21.3; znfl1g", "protein_names_uniprotkb": "Zinc finger-like gene 1g", "protein_names_refseq": "zinc finger-like gene 1g", "tax_id": 7955, "disease": "", "pathway": " (dre:792757)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "28623229;30472261", "class_list": "", "function": "##Evidence-Data-START## Transcript is intronless :: SRR26395062.5442.1, SRR32588734.1721526.1 [ECO:0000345] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000012.1. On Jun 18, 2025 this sequence version replaced NP_001139173.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NTG6", "ec_number_list": [], "go_molecular_function": "GO:0008270 zinc ion binding;GO:0003676 nucleic acid binding", "go_cellular_component": "", "go_biological_process": "GO:0030902 hindbrain development", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "B8A500-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "B8A507-1", "uniprot_id": [ { "id": "B8A507_DANRE", "url": "https://www.uniprot.org/uniprot/B8A507", "type": "external" } ], "mass": 72789.0, "length": 649, "protein_name": "Leucine-rich repeat transmembrane protein FLRT3", "gene_name": "flrt3", "organism": "Zebrafish", "refseq_name": "leucine-rich repeat transmembrane protein FLRT3 precursor", "refseq_ac": [ { "id": "NP_001243575", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001243575", "type": "external" } ], "gene_names_uniprotkb": "flrt3; fb93g11; si:dkeyp-24h12.1; wu:fb75d02; wu:fb93g11; wu:fc10a05", "gene_names_refseq": "fb93g11; flrt3; si:dkeyp-24h12.1; wu:fb75d02; wu:fb93g11; wu:fc10a05", "protein_names_uniprotkb": "Leucine-rich repeat transmembrane protein FLRT3", "protein_names_refseq": "leucine-rich repeat transmembrane protein FLRT3 precursor", "tax_id": 7955, "disease": "hypogonadotropic hypogonadism 21 with or without anosmia (Disease Ontology:DOID:0090093)", "pathway": " (dre:558864); (R-DRE-5654687)", "pathway_count": 2, "publication_count": 5, "publication_id_list": "19765300;20935258;25534026;26469318;28252024", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GFIL01010679.1, GDQH01004536.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA4476731, SAMEA4476745 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000013.1. On Feb 16, 2012 this sequence version replaced XP_687230.2. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NZ16", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0032584 growth cone membrane;GO:0005615 extracellular space;GO:0005925 focal adhesion;GO:0005789 endoplasmic reticulum membrane", "go_biological_process": "GO:0007155 cell adhesion", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "B8A507-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "B8A569-1", "uniprot_id": [ { "id": "B8A569_DANRE", "url": "https://www.uniprot.org/uniprot/B8A569", "type": "external" } ], "mass": 222217.0, "length": 1937, "protein_name": "Myosin heavy chain, fast skeletal muscle", "gene_name": "myhz1.3", "organism": "Zebrafish", "refseq_name": "myosin heavy chain, fast skeletal muscle", "refseq_ac": [ { "id": "XP_001924014", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_001924014", "type": "external" } ], "gene_names_uniprotkb": "myhz1.3", "gene_names_refseq": "myhz1.3", "protein_names_uniprotkb": "Myosin heavy chain, fast skeletal muscle", "protein_names_refseq": "myosin heavy chain, fast skeletal muscle", "tax_id": 7955, "disease": "distal arthrogryposis (Disease Ontology:DOID:0050646); cardiomyopathy (Disease Ontology:DOID:0050700); familial hypertrophic cardiomyopathy (Disease Ontology:DOID:0080326); congenital myopathy 6 (Disease Ontology:DOID:0080719); arthrogryposis multiplex congenita (Disease Ontology:DOID:0080954); dilated cardiomyopathy 1S (Disease Ontology:DOID:0110454); autosomal dominant hyaline body myopathy (Disease Ontology:DOID:0111269); distal arthrogryposis type 1 (Disease Ontology:DOID:0111596); distal arthrogryposis type 2B3 (Disease Ontology:DOID:0111602); distal arthrogryposis type 7 (Disease Ontology:DOID:0111603); distal arthrogryposis type 2A (Disease Ontology:DOID:0111605); sciatic neuropathy (Disease Ontology:DOID:11446); distal myopathy (Disease Ontology:DOID:11720); dilated cardiomyopathy (Disease Ontology:DOID:12930); disease of cellular proliferation (Disease Ontology:DOID:14566); myotonia congenita (Disease Ontology:DOID:2106); inclusion body myositis (Disease Ontology:DOID:3429); restrictive cardiomyopathy (Disease Ontology:DOID:397); myopathy (Disease Ontology:DOID:423); muscular dystrophy (Disease Ontology:DOID:9884)", "pathway": " (dre:100008070)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133180) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Mar 23, 2011 this sequence version replaced XP_001924014.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 20, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1QRD9;E7F1Z4", "ec_number_list": [], "go_molecular_function": "GO:0005524 ATP binding;GO:0051015 actin filament binding;GO:0000146 microfilament motor activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0032982 myosin filament;GO:0030016 myofibril;GO:0016460 myosin II complex", "go_biological_process": "GO:0048731 system development", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "B8A569-1", "record_type": "protein", "filter_code": "0000000.0000011.010000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "B8A574-1", "uniprot_id": [ { "id": "B8A574_DANRE", "url": "https://www.uniprot.org/uniprot/B8A574", "type": "external" } ], "mass": 103794.0, "length": 942, "protein_name": "Transforming acidic coiled-coil-containing protein 3 isoform X1", "gene_name": "tacc3", "organism": "Zebrafish", "refseq_name": "transforming acidic coiled-coil-containing protein 3 isoform X1", "refseq_ac": [ { "id": "XP_005157032", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005157032", "type": "external" } ], "gene_names_uniprotkb": "tacc3; cb500; sb:cb500; wu:fd20f10; zgc:111850", "gene_names_refseq": "cb500; sb:cb500; tacc3; wu:fd20f10; zgc:111850", "protein_names_uniprotkb": "Transforming acidic coiled-coil-containing protein 3 isoform X1", "protein_names_refseq": "transforming acidic coiled-coil-containing protein 3 isoform X1", "tax_id": 7955, "disease": "", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133188) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M2B3X9", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005813 centrosome;GO:0005829 cytosol", "go_biological_process": "GO:0021987 cerebral cortex development;GO:0007052 mitotic spindle organization;GO:0007097 nuclear migration;GO:0030953 astral microtubule organization", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "B8A574-1", "record_type": "protein", "filter_code": "0000000.0000000.010000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "B8A5M9-1", "uniprot_id": [ { "id": "B8A5M9_DANRE", "url": "https://www.uniprot.org/uniprot/B8A5M9", "type": "external" } ], "mass": 24545.0, "length": 205, "protein_name": "Cytochrome c oxidase assembly factor 8", "gene_name": "coa8", "organism": "Zebrafish", "refseq_name": "cytochrome c oxidase assembly factor 8", "refseq_ac": [ { "id": "NP_001139091", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001139091", "type": "external" } ], "gene_names_uniprotkb": "coa8; apopt1; si:ch211-194h13.2", "gene_names_refseq": "apopt1; coa8; si:ch211-194h13.2", "protein_names_uniprotkb": "Cytochrome c oxidase assembly factor 8", "protein_names_refseq": "apoptogenic 1, mitochondrial; cytochrome c oxidase assembly factor 8", "tax_id": 7955, "disease": "mitochondrial complex IV deficiency nuclear type 17 (Disease Ontology:DOID:0070502)", "pathway": " (dre:798687)", "pathway_count": 1, "publication_count": 3, "publication_id_list": "26469318;27189481;30929901", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: EH570084.1, GFIL01001325.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## ##RefSeq-Attributes-START## gene product(s) localized to mito. :: inferred from homology ##RefSeq-Attributes-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000013.1. On Mar 5, 2009 this sequence version replaced XP_001335974.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NTA1", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005739 mitochondrion;GO:0005743 mitochondrial inner membrane", "go_biological_process": "GO:0097193 intrinsic apoptotic signaling pathway", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "B8A5M9-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "B8A5U4-1", "uniprot_id": [ { "id": "B8A5U4_DANRE", "url": "https://www.uniprot.org/uniprot/B8A5U4", "type": "external" } ], "mass": 54030.0, "length": 483, "protein_name": "Target of EGR1 protein 1", "gene_name": "toe1", "organism": "Zebrafish", "refseq_name": "target of EGR1 protein 1", "refseq_ac": [ { "id": "NP_001243611", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001243611", "type": "external" } ], "gene_names_uniprotkb": "toe1; si:dkey-40i22.3", "gene_names_refseq": "si:dkey-40i22.3; toe1", "protein_names_uniprotkb": "Target of EGR1 protein 1", "protein_names_refseq": "target of EGR1 protein 1; target of EGR1, member 1 (nuclear)", "tax_id": 7955, "disease": "pontocerebellar hypoplasia (Disease Ontology:DOID:0060264); pontocerebellar hypoplasia type 7 (Disease Ontology:DOID:0060276)", "pathway": " (dre:568260)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "25556858;26469318;28092684;31680844", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GFIL01041656.1, GDQH01015637.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000002.1. On Feb 17, 2012 this sequence version replaced XP_001923913.2. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]; Inhibits cell growth rate and cell cycle. Induces CDKN1A expression as well as TGF-beta expression. Mediates the inhibitory growth effect of EGR1. Involved in the maturation of snRNAs and snRNA 3'-tail processing., [UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 2, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1P3K4", "ec_number_list": [], "go_molecular_function": "GO:0008270 zinc ion binding;GO:0017069 snRNA binding;GO:0000175 3'-5'-RNA exonuclease activity", "go_cellular_component": "GO:0005730 nucleolus;GO:0016607 nuclear speck;GO:0015030 Cajal body", "go_biological_process": "GO:0070050 neuron cellular homeostasis;GO:0007420 brain development;GO:0034472 snRNA 3'-end processing", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "B8A5U4-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "B8A5U5-1", "uniprot_id": [ { "id": "B8A5U5_DANRE", "url": "https://www.uniprot.org/uniprot/B8A5U5", "type": "external" } ], "mass": 135921.0, "length": 1191, "protein_name": "Dermatan-sulfate epimerase-like protein", "gene_name": "dsela", "organism": "Zebrafish", "refseq_name": "dermatan-sulfate epimerase-like protein", "refseq_ac": [ { "id": "XP_696502", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_696502", "type": "external" } ], "gene_names_uniprotkb": "dsela", "gene_names_refseq": "dsela", "protein_names_uniprotkb": "Dermatan-sulfate epimerase-like protein", "protein_names_refseq": "dermatan-sulfate epimerase-like protein", "tax_id": 7955, "disease": "", "pathway": " (dre:568099); (R-DRE-2022923)", "pathway_count": 2, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133177) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Feb 15, 2007 this sequence version replaced XP_696502.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8N7UTD6", "ec_number_list": [], "go_molecular_function": "GO:0047757 chondroitin-glucuronate 5-epimerase activity", "go_cellular_component": "GO:0016020 membrane", "go_biological_process": "GO:0050655 dermatan sulfate proteoglycan metabolic process;GO:0050654 chondroitin sulfate proteoglycan metabolic process", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "B8A5U5-1", "record_type": "protein", "filter_code": "0000000.0000001.010000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "B8A5X2-1", "uniprot_id": [ { "id": "B8A5X2_DANRE", "url": "https://www.uniprot.org/uniprot/B8A5X2", "type": "external" } ], "mass": 47990.0, "length": 416, "protein_name": "Sulfotransferase", "gene_name": "chst3a", "organism": "Zebrafish", "refseq_name": "carbohydrate sulfotransferase 3a precursor", "refseq_ac": [ { "id": "NP_001139043", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001139043", "type": "external" } ], "gene_names_uniprotkb": "chst3a; si:ch211-232k3.6", "gene_names_refseq": "chst3a; si:ch211-232k3.6", "protein_names_uniprotkb": "Sulfotransferase; 2.8.2.-", "protein_names_refseq": "carbohydrate sulfotransferase 3a precursor", "tax_id": 7955, "disease": "spondyloepiphyseal dysplasia with congenital joint dislocations (Disease Ontology:DOID:0050813); osteochondrodysplasia (Disease Ontology:DOID:2256); schizophrenia (Disease Ontology:DOID:5419)", "pathway": " (dre:559721)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "25793894;27189481;29539424;35192612", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: SRR32588722.23509053.1 [ECO:0000332] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000013.1. On Mar 5, 2009 this sequence version replaced XP_688178.3., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 3, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NT56;X1WBZ7", "ec_number_list": [ { "id": "2.8.2.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.8.2.-", "type": "external" } ], "go_molecular_function": "GO:0001517 N-acetylglucosamine 6-O-sulfotransferase activity;GO:0008459 chondroitin 6-sulfotransferase activity;GO:0045130 keratan sulfotransferase activity", "go_cellular_component": "GO:0000139 Golgi membrane", "go_biological_process": "GO:0006044 N-acetylglucosamine metabolic process;GO:0005975 carbohydrate metabolic process;GO:0006790 sulfur compound metabolic process;GO:0050650 chondroitin sulfate proteoglycan biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "B8A5X2-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "B8A5X9-1", "uniprot_id": [ { "id": "B8A5X9_DANRE", "url": "https://www.uniprot.org/uniprot/B8A5X9", "type": "external" } ], "mass": 50825.0, "length": 441, "protein_name": "Growth/differentiation factor 10", "gene_name": "gdf10a", "organism": "Zebrafish", "refseq_name": "growth/differentiation factor 10", "refseq_ac": [ { "id": "XP_691459", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_691459", "type": "external" } ], "gene_names_uniprotkb": "gdf10a", "gene_names_refseq": "gdf10a", "protein_names_uniprotkb": "Growth/differentiation factor 10; Bone morphogenetic protein 3B", "protein_names_refseq": "growth/differentiation factor 10", "tax_id": 7955, "disease": "", "pathway": " (dre:563003)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133188) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 9, 2008 this sequence version replaced XP_691459.2. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8N7T7I5", "ec_number_list": [], "go_molecular_function": "GO:0005125 cytokine activity;GO:0008083 growth factor activity", "go_cellular_component": "GO:0005615 extracellular space", "go_biological_process": "GO:0007178 cell surface receptor protein serine/threonine kinase signaling pathway;GO:0045669 positive regulation of osteoblast differentiation", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "B8A5X9-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "B8A609-1", "uniprot_id": [ { "id": "B8A609_DANRE", "url": "https://www.uniprot.org/uniprot/B8A609", "type": "external" } ], "mass": 78863.0, "length": 719, "protein_name": "RNA helicase", "gene_name": "ddx43", "organism": "Zebrafish", "refseq_name": "probable ATP-dependent RNA helicase DDX43", "refseq_ac": [ { "id": "NP_001315122", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001315122", "type": "external" } ], "gene_names_uniprotkb": "ddx43; zgc:174910", "gene_names_refseq": "ddx43; zgc:174910", "protein_names_uniprotkb": "RNA helicase; 3.6.4.13", "protein_names_refseq": "probable ATP-dependent RNA helicase DDX43", "tax_id": 7955, "disease": "", "pathway": " (dre:100136871)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "23663776;26469318;27189481;32285982;37605245", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: SRR26395028.1763918.1, SRR26395014.899949.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000013.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence because no single transcript was available for the full length of the gene. The extent of this transcript is supported by tiling transcript alignments, and RNA-seq and orthologous data., [RefSeq]", "predicted_glycosites": 2, "predicted_n_glycosites": 0, "predicted_o_glycosites": 2, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 2, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1PA27", "ec_number_list": [ { "id": "2.3.2.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.2.-", "type": "external" }, { "id": "2.3.2.27", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.2.27", "type": "external" }, { "id": "3.6.4.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.4.-", "type": "external" }, { "id": "4.2.99.18", "url": "https://www.rhea-db.org/rhea/?query=ec:4.2.99.18", "type": "external" }, { "id": "5.6.2.4", "url": "https://www.rhea-db.org/rhea/?query=ec:5.6.2.4", "type": "external" }, { "id": "5.6.2.3", "url": "https://www.rhea-db.org/rhea/?query=ec:5.6.2.3", "type": "external" }, { "id": "3.6.4.12", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.4.12", "type": "external" }, { "id": "3.6.4.13", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.4.13", "type": "external" }, { "id": "2.7.4.3", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.4.3", "type": "external" }, { "id": "7.6.2.2", "url": "https://www.rhea-db.org/rhea/?query=ec:7.6.2.2", "type": "external" }, { "id": "5.6.1.6", "url": "https://www.rhea-db.org/rhea/?query=ec:5.6.1.6", "type": "external" }, { "id": "7.6.2.3", "url": "https://www.rhea-db.org/rhea/?query=ec:7.6.2.3", "type": "external" }, { "id": "3.6.1.5", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.1.5", "type": "external" }, { "id": "3.6.4.6", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.4.6", "type": "external" }, { "id": "3.6.1.15", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.1.15", "type": "external" }, { "id": "3.6.4.10", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.4.10", "type": "external" }, { "id": "5.6.2.-", "url": "https://www.rhea-db.org/rhea/?query=ec:5.6.2.-", "type": "external" }, { "id": "2.7.7.7", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.7.7", "type": "external" }, { "id": "2.7.7.49", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.7.49", "type": "external" }, { "id": "5.6.2.5", "url": "https://www.rhea-db.org/rhea/?query=ec:5.6.2.5", "type": "external" }, { "id": "3.6.5.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.5.-", "type": "external" }, { "id": "3.6.1.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.1.-", "type": "external" } ], "go_molecular_function": "GO:0003729 mRNA binding;GO:0005524 ATP binding;GO:0016787 hydrolase activity;GO:0003724 RNA helicase activity", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "B8A609-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "B8A615-1", "uniprot_id": [ { "id": "B8A615_DANRE", "url": "https://www.uniprot.org/uniprot/B8A615", "type": "external" } ], "mass": 45008.0, "length": 388, "protein_name": "Uncharacterized protein LOC335380", "gene_name": "neff2", "organism": "Zebrafish", "refseq_name": "uncharacterized protein LOC335380", "refseq_ac": [ { "id": "NP_001188486", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001188486", "type": "external" } ], "gene_names_uniprotkb": "neff2; fj08a04; si:ch211-243o19.7; si:dkey-33c12.3; wu:fj08a04", "gene_names_refseq": "fj08a04; neff2; si:ch211-243o19.7; si:dkey-33c12.3; wu:fj08a04", "protein_names_uniprotkb": "Uncharacterized protein LOC335380", "protein_names_refseq": "intermediate filament protein-like; uncharacterized protein LOC335380", "tax_id": 7955, "disease": "", "pathway": " (dre:335380)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "28077310;28252024", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC097231.1, SRR26395013.989273.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA4476792 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000013.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NYX8", "ec_number_list": [], "go_molecular_function": "GO:0099184 structural constituent of postsynaptic intermediate filament cytoskeleton", "go_cellular_component": "GO:0030424 axon;GO:0005882 intermediate filament;GO:0099160 postsynaptic intermediate filament cytoskeleton", "go_biological_process": "GO:0033693 neurofilament bundle assembly", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "B8A615-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "B8A655-1", "uniprot_id": [ { "id": "B8A655_DANRE", "url": "https://www.uniprot.org/uniprot/B8A655", "type": "external" } ], "mass": 94191.0, "length": 823, "protein_name": "V-type proton ATPase subunit a", "gene_name": "tcirg1a", "organism": "Zebrafish", "refseq_name": "V-type proton ATPase 116 kDa subunit a 3", "refseq_ac": [ { "id": "XP_005160329", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005160329", "type": "external" } ], "gene_names_uniprotkb": "tcirg1a", "gene_names_refseq": "tcirg1a", "protein_names_uniprotkb": "V-type proton ATPase subunit a", "protein_names_refseq": "V-type proton ATPase 116 kDa subunit a 3", "tax_id": 7955, "disease": "autosomal recessive osteopetrosis 1 (Disease Ontology:DOID:0110942); clubfoot (Disease Ontology:DOID:11836)", "pathway": " (dre:100003139)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133176) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]; Essential component of the vacuolar proton pump (V-ATPase), a multimeric enzyme that catalyzes the translocation of protons across the membranes. Required for assembly and activity of the V-ATPase., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 2, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M2B734;F1R9Q4", "ec_number_list": [], "go_molecular_function": "GO:0051117 ATPase binding;GO:0046961 proton-transporting ATPase activity, rotational mechanism", "go_cellular_component": "GO:0005886 plasma membrane;GO:0016471 vacuolar proton-transporting V-type ATPase complex;GO:0000220 vacuolar proton-transporting V-type ATPase, V0 domain", "go_biological_process": "GO:0001503 ossification;GO:0007035 vacuolar acidification", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "B8A655-1", "record_type": "protein", "filter_code": "0000000.0000011.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "B8A688-1", "uniprot_id": [ { "id": "B8A688_DANRE", "url": "https://www.uniprot.org/uniprot/B8A688", "type": "external" } ], "mass": 59320.0, "length": 524, "protein_name": "Uncharacterized protein LOC563253", "gene_name": "si:ch211-198a12.6", "organism": "Zebrafish", "refseq_name": "uncharacterized protein LOC563253", "refseq_ac": [ { "id": "NP_001139051", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001139051", "type": "external" } ], "gene_names_uniprotkb": "si:ch211-198a12.6; fa08f12; fb72e11; fb77h12; fc06d05; fe14e05; id:ibd2708; wu:fa08f12; wu:fb72e11; wu:fb77h12; wu:fc06d05; wu:fe14e05", "gene_names_refseq": "fa08f12; fb72e11; fb77h12; fc06d05; fe14e05; id:ibd2708; si:ch211-198a12.6; wu:fa08f12; wu:fb72e11; wu:fb77h12; wu:fc06d05; wu:fe14e05", "protein_names_uniprotkb": "Uncharacterized protein LOC563253", "protein_names_refseq": "uncharacterized protein LOC563253", "tax_id": 7955, "disease": "", "pathway": " (dre:563253); (R-DRE-9843940)", "pathway_count": 2, "publication_count": 3, "publication_id_list": "11731487;18335061;27189481", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GFIL01035798.1, GDQH01003491.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## PREDICTED REFSEQ: This record has not been reviewed and the function is unknown. The reference sequence was derived from JBMGRA010000013.1. On May 12, 2009 this sequence version replaced XP_708410.1., [RefSeq]; May be involved in transcriptional regulation., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8N1Z0T1", "ec_number_list": [], "go_molecular_function": "GO:0008270 zinc ion binding;GO:0000977 RNA polymerase II transcription regulatory region sequence-specific DNA binding;GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006357 regulation of transcription by RNA polymerase II", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "B8A688-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "B8A6A3-1", "uniprot_id": [ { "id": "B8A6A3_DANRE", "url": "https://www.uniprot.org/uniprot/B8A6A3", "type": "external" } ], "mass": 28799.0, "length": 256, "protein_name": "NFU1 iron-sulfur cluster scaffold homolog, mitochondrial", "gene_name": "zgc:110319", "organism": "Zebrafish", "refseq_name": "uncharacterized protein LOC796111", "refseq_ac": [ { "id": "NP_001018093", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001018093", "type": "external" } ], "gene_names_uniprotkb": "zgc:110319; zgc:110319", "gene_names_refseq": "zgc:110319", "protein_names_uniprotkb": "NFU1 iron-sulfur cluster scaffold homolog, mitochondrial", "protein_names_refseq": "HIRA interacting protein; NFU1 iron-sulfur cluster scaffold homolog; uncharacterized protein LOC796111", "tax_id": 7955, "disease": "hereditary spastic paraplegia 93 (Disease Ontology:DOID:0070645); multiple mitochondrial dysfunctions syndrome 1 (Disease Ontology:DOID:0080133)", "pathway": "", "pathway_count": 0, "publication_count": 3, "publication_id_list": "27189481;28252024;35121025", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC092870.1, EH551335.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000013.1. On or before Jun 27, 2025 this sequence version replaced XP_073776120.1, NP_001018093.2., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 2, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1N5V4", "ec_number_list": [], "go_molecular_function": "GO:0005506 iron ion binding;GO:0051539 4 iron, 4 sulfur cluster binding", "go_cellular_component": "GO:0005739 mitochondrion", "go_biological_process": "GO:0016226 iron-sulfur cluster assembly;GO:0051604 protein maturation", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "B8A6A3-1", "record_type": "protein", "filter_code": "0000000.0000110.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "B8A6D0-1", "uniprot_id": [ { "id": "B8A6D0_DANRE", "url": "https://www.uniprot.org/uniprot/B8A6D0", "type": "external" } ], "mass": 21247.0, "length": 189, "protein_name": "COMM domain-containing protein 1", "gene_name": "commd1", "organism": "Zebrafish", "refseq_name": "COMM domain-containing protein 1", "refseq_ac": [ { "id": "NP_001038730", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001038730", "type": "external" } ], "gene_names_uniprotkb": "commd1; murr1; si:ch211-213b8.2; zgc:136584", "gene_names_refseq": "commd1; murr1; si:ch211-213b8.2; zgc:136584", "protein_names_uniprotkb": "COMM domain-containing protein 1", "protein_names_refseq": "COMM domain containing protein 1; COMM domain-containing protein 1", "tax_id": 7955, "disease": "", "pathway": " (R-DRE-8951664)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: SRR32588734.1653244.1, SRR32588726.52720635.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505387, SAMEA4476737 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000001.1. On or before Jun 23, 2025 this sequence version replaced XP_005160206.1, NP_001038730.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M2B7C9", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005768 endosome", "go_biological_process": "GO:0031398 positive regulation of protein ubiquitination;GO:2000009 negative regulation of protein localization to cell surface;GO:0032434 regulation of proteasomal ubiquitin-dependent protein catabolic process;GO:0055070 copper ion homeostasis;GO:1902306 negative regulation of sodium ion transmembrane transport", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "B8A6D0-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "B8A6D3-1", "uniprot_id": [ { "id": "B8A6D3_DANRE", "url": "https://www.uniprot.org/uniprot/B8A6D3", "type": "external" } ], "mass": 49517.0, "length": 452, "protein_name": "L-2-hydroxyglutarate dehydrogenase, mitochondrial", "gene_name": "l2hgdh", "organism": "Zebrafish", "refseq_name": "L-2-hydroxyglutarate dehydrogenase, mitochondrial", "refseq_ac": [ { "id": "NP_001139067", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001139067", "type": "external" } ], "gene_names_uniprotkb": "l2hgdh; si:ch211-67f24.10", "gene_names_refseq": "l2hgdh; si:ch211-67f24.10", "protein_names_uniprotkb": "L-2-hydroxyglutarate dehydrogenase, mitochondrial; 1.1.99.2", "protein_names_refseq": "L-2-hydroxyglutarate dehydrogenase, mitochondrial", "tax_id": 7955, "disease": "2-hydroxyglutaric aciduria (Disease Ontology:DOID:0050573); L-2-hydroxyglutaric aciduria (Disease Ontology:DOID:0050574); cerebellar ataxia (Disease Ontology:DOID:0050753); hereditary spastic paraplegia (Disease Ontology:DOID:2476)", "pathway": " (dre:566872); (R-DRE-880009)", "pathway_count": 2, "publication_count": 2, "publication_id_list": "26469318;29021367", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GDQH01012021.1, SRR32588717.32478243.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## ##RefSeq-Attributes-START## gene product(s) localized to mito. :: inferred from homology ##RefSeq-Attributes-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000013.1. On Mar 5, 2009 this sequence version replaced XP_690293.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 4, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NRK2", "ec_number_list": [ { "id": "1.1.99.2", "url": "https://www.rhea-db.org/rhea/?query=ec:1.1.99.2", "type": "external" } ], "go_molecular_function": "GO:0047545 (S)-2-hydroxyglutarate dehydrogenase activity", "go_cellular_component": "GO:0005739 mitochondrion", "go_biological_process": "GO:0044281 small molecule metabolic process", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "B8A6D3-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "B8A6H5-1", "uniprot_id": [ { "id": "B8A6H5_DANRE", "url": "https://www.uniprot.org/uniprot/B8A6H5", "type": "external" } ], "mass": 46738.0, "length": 418, "protein_name": "RING finger protein 150a precursor", "gene_name": "rnf150a", "organism": "Zebrafish", "refseq_name": "RING finger protein 150a precursor", "refseq_ac": [ { "id": "NP_001139044", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001139044", "type": "external" } ], "gene_names_uniprotkb": "rnf150a; rnf150", "gene_names_refseq": "rnf150a; rnf150", "protein_names_uniprotkb": "RING finger protein 150a precursor", "protein_names_refseq": "RING finger protein 150a precursor; ring finger protein 150", "tax_id": 7955, "disease": "", "pathway": " (dre:559804)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "16055191;18335061", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: SRR32588719.10233311.1, SRR32588723.3234238.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA4476729, SAMEA4476737 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000001.1. On Mar 5, 2009 this sequence version replaced XP_688268.2. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8N1Z0C6", "ec_number_list": [], "go_molecular_function": "GO:0008270 zinc ion binding;GO:0061630 ubiquitin protein ligase activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0016020 membrane", "go_biological_process": "GO:0006511 ubiquitin-dependent protein catabolic process", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "B8A6H5-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "B8JHU7-1", "uniprot_id": [ { "id": "B8JHU7_DANRE", "url": "https://www.uniprot.org/uniprot/B8JHU7", "type": "external" } ], "mass": 74028.0, "length": 671, "protein_name": "Sodium/myo-inositol cotransporter", "gene_name": "slc5a3a", "organism": "Zebrafish", "refseq_name": "solute carrier family 5 member 3a", "refseq_ac": [ { "id": "NP_001153309", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001153309", "type": "external" } ], "gene_names_uniprotkb": "slc5a3a; CH211-132G1.5; si:ch211-132g1.5; slc5a3", "gene_names_refseq": "CH211-132G1.5; si:ch211-132g1.5; slc5a3a; slc5a3", "protein_names_uniprotkb": "Sodium/myo-inositol cotransporter; Sodium/myo-inositol transporter 1; Solute carrier family 5 member 3", "protein_names_refseq": "solute carrier family 5 (inositol transporters), member 3a; solute carrier family 5 (inositol transporters), member 3; solute carrier family 5 (sodium/myo-inositol cotransporter), member 3a; solute carrier family 5 member 3a", "tax_id": 7955, "disease": "", "pathway": " (dre:100004287); (R-DRE-429593)", "pathway_count": 2, "publication_count": 1, "publication_id_list": "21873635", "class_list": "", "function": "PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000001.1. On May 8, 2009 this sequence version replaced XP_001343625.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NUB8;A0AC58HBT2", "ec_number_list": [], "go_molecular_function": "GO:0005367 myo-inositol:sodium symporter activity", "go_cellular_component": "GO:0005886 plasma membrane;GO:0016323 basolateral plasma membrane;GO:0016324 apical plasma membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "B8JHU7-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "B8JHY6-1", "uniprot_id": [ { "id": "B8JHY6_DANRE", "url": "https://www.uniprot.org/uniprot/B8JHY6", "type": "external" } ], "mass": 81807.0, "length": 697, "protein_name": "Cyclic nucleotide gated channel subunit alpha 1a", "gene_name": "cnga1a", "organism": "Zebrafish", "refseq_name": "cyclic nucleotide gated channel subunit alpha 1a", "refseq_ac": [ { "id": "NP_001139095", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001139095", "type": "external" } ], "gene_names_uniprotkb": "cnga1a; si:dkey-22i16.2", "gene_names_refseq": "cnga1a; si:dkey-22i16.2", "protein_names_uniprotkb": "Cyclic nucleotide gated channel subunit alpha 1a", "protein_names_refseq": "cyclic nucleotide gated channel alpha 1a; cyclic nucleotide gated channel subunit alpha 1a", "tax_id": 7955, "disease": "retinitis pigmentosa 49 (Disease Ontology:DOID:0110377); retinitis pigmentosa (Disease Ontology:DOID:10584)", "pathway": " (dre:100001558)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "26469318", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: SRR32588730.11244447.1, SRR32588723.3157364.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN01765705 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000001.1. On Mar 5, 2009 this sequence version replaced XP_001341530.2., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 2, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NTF4;E9QFG9", "ec_number_list": [], "go_molecular_function": "GO:0005223 intracellularly cGMP-activated cation channel activity;GO:0005222 intracellularly cAMP-activated cation channel activity;GO:0030553 cGMP binding", "go_cellular_component": "GO:0005886 plasma membrane;GO:0017071 intracellular cyclic nucleotide activated cation channel complex", "go_biological_process": "GO:0098655 monoatomic cation transmembrane transport;GO:0007606 sensory perception of chemical stimulus", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "B8JHY6-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "B8JIG1-1", "uniprot_id": [ { "id": "B8JIG1_DANRE", "url": "https://www.uniprot.org/uniprot/B8JIG1", "type": "external" } ], "mass": 50399.0, "length": 449, "protein_name": "Cilia- and flagella-associated protein 97", "gene_name": "cfap97", "organism": "Zebrafish", "refseq_name": "cilia- and flagella-associated protein 97 isoform X1", "refseq_ac": [ { "id": "XP_005168395", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005168395", "type": "external" } ], "gene_names_uniprotkb": "cfap97; fj68c08; wu:fj68c08; zgc:85910", "gene_names_refseq": "cfap97; fj68c08; wu:fj68c08; zgc:85910", "protein_names_uniprotkb": "Cilia- and flagella-associated protein 97", "protein_names_refseq": "cilia- and flagella-associated protein 97 isoform X1", "tax_id": 7955, "disease": "", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133176) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M2BFM9", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "B8JIG1-1", "record_type": "protein", "filter_code": "0000000.0000000.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "B8JIG9-1", "uniprot_id": [ { "id": "B8JIG9_DANRE", "url": "https://www.uniprot.org/uniprot/B8JIG9", "type": "external" } ], "mass": 50766.0, "length": 447, "protein_name": "Transmembrane protein 184C", "gene_name": "tmem184c", "organism": "Zebrafish", "refseq_name": "transmembrane protein 184C", "refseq_ac": [ { "id": "NP_001139068", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001139068", "type": "external" } ], "gene_names_uniprotkb": "tmem184c; si:ch211-172j10.2", "gene_names_refseq": "si:ch211-172j10.2; tmem184c", "protein_names_uniprotkb": "Transmembrane protein 184C", "protein_names_refseq": "transmembrane protein 184C", "tax_id": 7955, "disease": "", "pathway": " (dre:567248)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "33757938", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GFIL01041071.1, SRR32588729.3710935.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505388, SAMEA3505389 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000001.1. On Mar 5, 2009 this sequence version replaced XP_695632.2., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NQ51", "ec_number_list": [], "go_molecular_function": "GO:0022857 transmembrane transporter activity", "go_cellular_component": "GO:0016020 membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "B8JIG9-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "B8JIP8-1", "uniprot_id": [ { "id": "B8JIP8_DANRE", "url": "https://www.uniprot.org/uniprot/B8JIP8", "type": "external" } ], "mass": 20139.0, "length": 176, "protein_name": "Calcyon neuron-specific vesicular protein", "gene_name": "caly", "organism": "Zebrafish", "refseq_name": "calcyon neuron-specific vesicular protein", "refseq_ac": [ { "id": "NP_001313479", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001313479", "type": "external" } ], "gene_names_uniprotkb": "caly; si:dkeyp-80c12.9", "gene_names_refseq": "caly; si:dkeyp-80c12.9", "protein_names_uniprotkb": "Calcyon neuron-specific vesicular protein", "protein_names_refseq": "calcyon neuron-specific vesicular protein", "tax_id": 7955, "disease": "attention deficit hyperactivity disorder (Disease Ontology:DOID:1094); schizophrenia (Disease Ontology:DOID:5419)", "pathway": " (dre:100307104)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "19760447;26469318", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC095258.1, CN013832.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000001.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 2, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1P2T6", "ec_number_list": [], "go_molecular_function": "GO:0032051 clathrin light chain binding", "go_cellular_component": "GO:0005768 endosome;GO:0016020 membrane;GO:0030659 cytoplasmic vesicle membrane", "go_biological_process": "GO:0016197 endosomal transport;GO:0048268 clathrin coat assembly", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "B8JIP8-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "B8JIS5-1", "uniprot_id": [ { "id": "B8JIS5_DANRE", "url": "https://www.uniprot.org/uniprot/B8JIS5", "type": "external" } ], "mass": 25813.0, "length": 219, "protein_name": "glutathione transferase", "gene_name": "gstm.3", "organism": "Zebrafish", "refseq_name": "glutathione S-transferase mu tandem duplicate 3", "refseq_ac": [ { "id": "NP_001156323", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001156323", "type": "external" } ], "gene_names_uniprotkb": "gstm.3; gstm3; im:6897516", "gene_names_refseq": "gstm.3; gstm3; im:6897516", "protein_names_uniprotkb": "glutathione transferase; 2.5.1.18; GST class-mu", "protein_names_refseq": "glutathione S-transferase M3 (brain); glutathione S-transferase mu 3 (brain); glutathione S-transferase mu tandem duplicate 3", "tax_id": 7955, "disease": "Brugada syndrome (Disease Ontology:DOID:0050451)", "pathway": " (dre:568744); (R-DRE-156590); (R-DRE-9026762); (R-DRE-9748787); (R-DRE-9753281)", "pathway_count": 5, "publication_count": 10, "publication_id_list": "21445457;23770340;24349563;25119852;25461745;32428239;32645615;34413171;34523214;37024546", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: EH432240.1, EH452884.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000008.1. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications., [RefSeq]; Conjugation of reduced glutathione to a wide number of exogenous and endogenous hydrophobic electrophiles., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NS60", "ec_number_list": [ { "id": "2.5.1.18", "url": "https://www.rhea-db.org/rhea/?query=ec:2.5.1.18", "type": "external" }, { "id": "1.20.4.2", "url": "https://www.rhea-db.org/rhea/?query=ec:1.20.4.2", "type": "external" }, { "id": "1.8.5.1", "url": "https://www.rhea-db.org/rhea/?query=ec:1.8.5.1", "type": "external" }, { "id": "5.2.1.2", "url": "https://www.rhea-db.org/rhea/?query=ec:5.2.1.2", "type": "external" } ], "go_molecular_function": "GO:0004364 glutathione transferase activity", "go_cellular_component": "", "go_biological_process": "GO:0006749 glutathione metabolic process", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "B8JIS5-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "B8JIV0-1", "uniprot_id": [ { "id": "B8JIV0_DANRE", "url": "https://www.uniprot.org/uniprot/B8JIV0", "type": "external" } ], "mass": 20691.0, "length": 183, "protein_name": "small monomeric GTPase", "gene_name": "rap2ab", "organism": "Zebrafish", "refseq_name": "ras-related protein Rap-2a", "refseq_ac": [ { "id": "NP_001139177", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001139177", "type": "external" } ], "gene_names_uniprotkb": "rap2ab; si:dkeyp-67e7.1", "gene_names_refseq": "rap2ab; si:dkeyp-67e7.1", "protein_names_uniprotkb": "small monomeric GTPase; 3.6.5.2", "protein_names_refseq": "ras-related protein Rap-2a", "tax_id": 7955, "disease": "", "pathway": " (dre:100003903)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "27189481;28252024", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: SRR32588727.1199213.1, SRR32588721.559531.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505371, SAMEA3505372 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000001.1. On Mar 11, 2009 this sequence version replaced XP_001343341.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NQC4", "ec_number_list": [ { "id": "3.6.5.2", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.5.2", "type": "external" }, { "id": "3.6.5.3", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.5.3", "type": "external" }, { "id": "3.6.5.5", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.5.5", "type": "external" }, { "id": "3.6.1.5", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.1.5", "type": "external" }, { "id": "3.6.5.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.5.-", "type": "external" }, { "id": "3.6.1.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.1.-", "type": "external" }, { "id": "3.6.5.4", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.5.4", "type": "external" } ], "go_molecular_function": "GO:0003924 GTPase activity;GO:0005525 GTP binding;GO:0003925 G protein activity", "go_cellular_component": "GO:0005886 plasma membrane;GO:0055038 recycling endosome membrane", "go_biological_process": "GO:0032486 Rap protein signal transduction;GO:0030336 negative regulation of cell migration", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "B8JIV0-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "B8JJ08-1", "uniprot_id": [ { "id": "B8JJ08_DANRE", "url": "https://www.uniprot.org/uniprot/B8JJ08", "type": "external" } ], "mass": 53716.0, "length": 480, "protein_name": "RAR-related orphan receptor C b", "gene_name": "rorcb", "organism": "Zebrafish", "refseq_name": "RAR-related orphan receptor C b", "refseq_ac": [ { "id": "NP_001264023", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001264023", "type": "external" } ], "gene_names_uniprotkb": "rorcb; si:ch211-168n16.2; si:dkey-158a20.2", "gene_names_refseq": "rorcb; si:ch211-168n16.2; si:dkey-158a20.2", "protein_names_uniprotkb": "RAR-related orphan receptor C b", "protein_names_refseq": "NR1F3-B; RAR-related orphan receptor C b; RORgamma-B; RORgamma2", "tax_id": 7955, "disease": "immunodeficiency 42 (Disease Ontology:DOID:0111940); Sjogren's syndrome (Disease Ontology:DOID:12894); tuberculosis (Disease Ontology:DOID:399)", "pathway": " (dre:562258)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "17496157;17997606;22683816;25711679;26161812;27618422;28993021;33508534;34925060;36403304", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: SRR32588714.25108986.1, SRR32588715.673321.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA4476746, SAMEA708828 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000002.1. On Jun 25, 2025 this sequence version replaced NP_001264023.1. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 3, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NZB6", "ec_number_list": [], "go_molecular_function": "GO:0008270 zinc ion binding;GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding;GO:0004879 nuclear receptor activity", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006357 regulation of transcription by RNA polymerase II", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "B8JJ08-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "B8JJ17-1", "uniprot_id": [ { "id": "B8JJ17_DANRE", "url": "https://www.uniprot.org/uniprot/B8JJ17", "type": "external" } ], "mass": 44255.0, "length": 399, "protein_name": "BAG family molecular chaperone regulator 4", "gene_name": "bag4", "organism": "Zebrafish", "refseq_name": "BAG family molecular chaperone regulator 4", "refseq_ac": [ { "id": "NP_001243658", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001243658", "type": "external" } ], "gene_names_uniprotkb": "bag4; fd20a04; si:dkey-220o5.3; wu:fd20a04", "gene_names_refseq": "bag4; fd20a04; si:dkey-220o5.3; wu:fd20a04", "protein_names_uniprotkb": "BAG family molecular chaperone regulator 4", "protein_names_refseq": "BAG family molecular chaperone regulator 4", "tax_id": 7955, "disease": "pancreatic cancer (Disease Ontology:DOID:1793)", "pathway": " (dre:100001980); (R-DRE-3371453); (R-DRE-75893)", "pathway_count": 3, "publication_count": 2, "publication_id_list": "26469318;33942360", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: EH536056.1, EL647648.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505371, SAMEA3505381 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from EH536056.1 and EH564466.1. On Feb 18, 2012 this sequence version replaced XP_001337521.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1P3L3", "ec_number_list": [], "go_molecular_function": "GO:0051087 protein-folding chaperone binding;GO:0000774 adenyl-nucleotide exchange factor activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005829 cytosol;GO:0016020 membrane", "go_biological_process": "GO:0050821 protein stabilization", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "B8JJ17-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "B8JJU9-1", "uniprot_id": [ { "id": "B8JJU9_DANRE", "url": "https://www.uniprot.org/uniprot/B8JJU9", "type": "external" } ], "mass": 70441.0, "length": 626, "protein_name": "Uncharacterized protein LOC563108", "gene_name": "zc3h12ab", "organism": "Zebrafish", "refseq_name": "uncharacterized protein LOC563108", "refseq_ac": [ { "id": "NP_001164500", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001164500", "type": "external" } ], "gene_names_uniprotkb": "zc3h12ab; si:dkey-206d17.12", "gene_names_refseq": "si:dkey-206d17.12; zc3h12ab", "protein_names_uniprotkb": "Uncharacterized protein LOC563108", "protein_names_refseq": "uncharacterized protein LOC563108", "tax_id": 7955, "disease": "primary biliary cholangitis (Disease Ontology:DOID:12236); hepatitis B (Disease Ontology:DOID:2043)", "pathway": " (dre:563108)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "21873635;37001786", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GDQH01013677.1, GDQQ01010434.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## PREDICTED REFSEQ: This record has not been reviewed and the function is unknown. The reference sequence was derived from JBMGRA010000019.1. On Jun 25, 2025 this sequence version replaced NP_001164500.1., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 2, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NUF4", "ec_number_list": [], "go_molecular_function": "GO:0003729 mRNA binding;GO:0008270 zinc ion binding;GO:0016787 hydrolase activity;GO:0003730 mRNA 3'-UTR binding;GO:0004521 RNA endonuclease activity", "go_cellular_component": "GO:0005634 nucleus;GO:0036464 cytoplasmic ribonucleoprotein granule", "go_biological_process": "GO:0010608 post-transcriptional regulation of gene expression;GO:0061158 3'-UTR-mediated mRNA destabilization", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "B8JJU9-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "B8JJV5-1", "uniprot_id": [ { "id": "SIM13_DANRE", "url": "https://www.uniprot.org/uniprot/B8JJV5", "type": "external" } ], "mass": 9983.0, "length": 88, "protein_name": "Small integral membrane protein 13", "gene_name": "smim13", "organism": "Zebrafish", "refseq_name": "small integral membrane protein 13", "refseq_ac": [ { "id": "NP_001129051", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001129051", "type": "external" } ], "gene_names_uniprotkb": "smim13; si:ch73-364o13.1; si:dkey-206d17.5", "gene_names_refseq": "si:ch73-364o13.1; smim13", "protein_names_uniprotkb": "Small integral membrane protein 13", "protein_names_refseq": "UPF0766 protein C6orf228 homolog; small integral membrane protein 13", "tax_id": 7955, "disease": "", "pathway": " (dre:100190889)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "23594743", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: EH456364.1, EH441978.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505371, SAMEA3505385 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from EH456364.1, EH586948.1, EH485638.1, EH468096.1 and EH596736.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0016020 membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "B8JJV5-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "B8JK19-1", "uniprot_id": [ { "id": "B8JK19_DANRE", "url": "https://www.uniprot.org/uniprot/B8JK19", "type": "external" } ], "mass": 35375.0, "length": 317, "protein_name": "2.1.1.-; Surfactant protein Bb precursor", "gene_name": "sftpbb", "organism": "Zebrafish", "refseq_name": "surfactant protein Bb precursor", "refseq_ac": [ { "id": "NP_001164537", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001164537", "type": "external" } ], "gene_names_uniprotkb": "sftpbb; si:ch211-283h6.6; wu:fd19f07", "gene_names_refseq": "sftpbb; si:ch211-283h6.6; wu:fd19f07", "protein_names_uniprotkb": "2.1.1.-; Surfactant protein Bb precursor", "protein_names_refseq": "surfactant protein Bb precursor", "tax_id": 7955, "disease": "obstructive sleep apnea (Disease Ontology:DOID:0050848); respiratory failure (Disease Ontology:DOID:11162); adult respiratory distress syndrome (Disease Ontology:DOID:11394); bronchopulmonary dysplasia (Disease Ontology:DOID:11650); pulmonary alveolar proteinosis (Disease Ontology:DOID:12120); newborn respiratory distress syndrome (Disease Ontology:DOID:12716); respiratory syncytial virus infectious disease (Disease Ontology:DOID:1273); lung cancer (Disease Ontology:DOID:1324); toxic shock syndrome (Disease Ontology:DOID:14115); cystic fibrosis (Disease Ontology:DOID:1485); asthma (Disease Ontology:DOID:2841); interstitial lung disease (Disease Ontology:DOID:3082); chronic obstructive pulmonary disease (Disease Ontology:DOID:3083); pulmonary fibrosis (Disease Ontology:DOID:3770); lung squamous cell carcinoma (Disease Ontology:DOID:3907); lung non-small cell carcinoma (Disease Ontology:DOID:3908); pneumonia (Disease Ontology:DOID:552); lung disease (Disease Ontology:DOID:850); bacterial pneumonia (Disease Ontology:DOID:874)", "pathway": " (dre:100001978); (R-DRE-5683826)", "pathway_count": 2, "publication_count": 5, "publication_id_list": "15520368;26469318;27189481;28437249;34325655", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC155325.1, GDQQ01006376.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000005.1. On Jun 7, 2025 this sequence version replaced NP_001164537.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 19, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NUF5", "ec_number_list": [ { "id": "2.1.1.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.1.1.-", "type": "external" } ], "go_molecular_function": "", "go_cellular_component": "GO:0005615 extracellular space;GO:0016020 membrane;GO:0005764 lysosome", "go_biological_process": "GO:0006665 sphingolipid metabolic process", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "B8JK19-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "B8JKA7-1", "uniprot_id": [ { "id": "B8JKA7_DANRE", "url": "https://www.uniprot.org/uniprot/B8JKA7", "type": "external" } ], "mass": 21624.0, "length": 196, "protein_name": "AP-5 complex subunit sigma-1 precursor", "gene_name": "ap5s1", "organism": "Zebrafish", "refseq_name": "AP-5 complex subunit sigma-1", "refseq_ac": [ { "id": "NP_001292497", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001292497", "type": "external" } ], "gene_names_uniprotkb": "ap5s1; si:dkey-146d24.2", "gene_names_refseq": "ap5s1; si:dkey-146d24.2", "protein_names_uniprotkb": "AP-5 complex subunit sigma-1 precursor", "protein_names_refseq": "AP-5 complex subunit sigma-1; adaptor-related protein complex 5, sigma 1 subunit", "tax_id": 7955, "disease": "", "pathway": " (dre:556111)", "pathway_count": 1, "publication_count": 3, "publication_id_list": "15520368;26469318;27189481", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC122252.1, GDQH01008845.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505381, SAMEA3505393 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000013.1 and EH543915.1. On Mar 19, 2015 this sequence version replaced XP_005156643.1. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1P1T9", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005829 cytosol;GO:0005764 lysosome;GO:0005770 late endosome;GO:0030119 AP-type membrane coat adaptor complex", "go_biological_process": "GO:0016197 endosomal transport;GO:0000724 double-strand break repair via homologous recombination", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "B8JKA7-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "B8JLC8-1", "uniprot_id": [ { "id": "B8JLC8_DANRE", "url": "https://www.uniprot.org/uniprot/B8JLC8", "type": "external" } ], "mass": 22314.0, "length": 201, "protein_name": "RAB1A, member RAS oncogene family a", "gene_name": "rab1aa", "organism": "Zebrafish", "refseq_name": "RAB1A, member RAS oncogene family a", "refseq_ac": [ { "id": "NP_001313450", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001313450", "type": "external" } ], "gene_names_uniprotkb": "rab1aa; si:ch73-131e21.5", "gene_names_refseq": "rab1aa; si:ch73-131e21.5", "protein_names_uniprotkb": "RAB1A, member RAS oncogene family a", "protein_names_refseq": "RAB1A, member RAS oncogene family a", "tax_id": 7955, "disease": "dilated cardiomyopathy (Disease Ontology:DOID:12930)", "pathway": " (dre:566914)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "18335061;26469318;26767746;28252024;28396820", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: CT717691.2, EX464350.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA4476730, SAMEA4476731 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000001.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1P8Q2", "ec_number_list": [], "go_molecular_function": "GO:0003924 GTPase activity;GO:0005525 GTP binding", "go_cellular_component": "GO:0012505 endomembrane system", "go_biological_process": "GO:0000045 autophagosome assembly;GO:0006886 intracellular protein transport", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "B8JLC8-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "B8JLD4-1", "uniprot_id": [ { "id": "B8JLD4_DANRE", "url": "https://www.uniprot.org/uniprot/B8JLD4", "type": "external" } ], "mass": 115855.0, "length": 1046, "protein_name": "2.3.2.26; Probable E3 ubiquitin-protein ligase HERC3", "gene_name": "herc3", "organism": "Zebrafish", "refseq_name": "probable E3 ubiquitin-protein ligase HERC3", "refseq_ac": [ { "id": "NP_001139096", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001139096", "type": "external" } ], "gene_names_uniprotkb": "herc3; si:ch73-190m4.3", "gene_names_refseq": "herc3; si:ch73-190m4.3", "protein_names_uniprotkb": "2.3.2.26; Probable E3 ubiquitin-protein ligase HERC3", "protein_names_refseq": "hect domain and RLD 3; probable E3 ubiquitin-protein ligase HERC3", "tax_id": 7955, "disease": "", "pathway": " (dre:100003587); (R-DRE-983168)", "pathway_count": 2, "publication_count": 1, "publication_id_list": "26469318", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GFIL01012454.1, GDQH01004158.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA4476734, SAMEA4476735 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000001.1. On Mar 5, 2009 this sequence version replaced XP_001343099.2., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NTA5", "ec_number_list": [ { "id": "2.3.2.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.2.-", "type": "external" }, { "id": "2.3.2.27", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.2.27", "type": "external" }, { "id": "3.6.4.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.4.-", "type": "external" }, { "id": "2.3.2.34", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.2.34", "type": "external" }, { "id": "2.3.2.26", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.2.26", "type": "external" }, { "id": "6.2.1.45", "url": "https://www.rhea-db.org/rhea/?query=ec:6.2.1.45", "type": "external" }, { "id": "2.3.2.31", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.2.31", "type": "external" }, { "id": "2.3.2.23", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.2.23", "type": "external" }, { "id": "3.4.19.12", "url": "https://www.rhea-db.org/rhea/?query=ec:3.4.19.12", "type": "external" }, { "id": "2.3.2.25", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.2.25", "type": "external" } ], "go_molecular_function": "GO:0061630 ubiquitin protein ligase activity", "go_cellular_component": "GO:0005737 cytoplasm", "go_biological_process": "GO:0016567 protein ubiquitination;GO:0006511 ubiquitin-dependent protein catabolic process", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "B8JLD4-1", "record_type": "protein", "filter_code": "0000000.0000101.010000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "P28174-1", "uniprot_id": [ { "id": "HXC3A_DANRE", "url": "https://www.uniprot.org/uniprot/P28174", "type": "external" } ], "mass": 29088.0, "length": 250, "protein_name": "Homeobox protein Hox-C3a", "gene_name": "hoxc3a", "organism": "Zebrafish", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "hoxc3a; HOX-114; zf114; zgc:110503", "gene_names_refseq": "", "protein_names_uniprotkb": "Homeobox protein Hox-C3a; Homeobox protein Zf-114; Hox-114", "protein_names_refseq": "", "tax_id": 7955, "disease": "", "pathway": " (dre:30421)", "pathway_count": 1, "publication_count": 11, "publication_id_list": "1356006;15716008;16174031;16472944;18202881;33795334;34096572;37717409;38861596;38940461;8978059", "class_list": "", "function": "Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis., [UniProtKB, UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding;GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific;GO:0003677 DNA binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006357 regulation of transcription by RNA polymerase II;GO:0009952 anterior/posterior pattern specification;GO:0048704 embryonic skeletal system morphogenesis;GO:0003309 type B pancreatic cell differentiation", "synthesized_glycan_count": 0, "hit_score": 1.2, "record_id": "P28174-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q08BY2-1", "uniprot_id": [ { "id": "F168B_DANRE", "url": "https://www.uniprot.org/uniprot/Q08BY2", "type": "external" } ], "mass": 20398.0, "length": 195, "protein_name": "Myelin-associated neurite-outgrowth inhibitor", "gene_name": "fam168b", "organism": "Zebrafish", "refseq_name": "myelin-associated neurite-outgrowth inhibitor", "refseq_ac": [ { "id": "NP_001070037", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001070037", "type": "external" } ], "gene_names_uniprotkb": "fam168b; fb25h10; wu:fb25h10; zgc:153980", "gene_names_refseq": "fam168b; fb25h10; wu:fb25h10; zgc:153980", "protein_names_uniprotkb": "Myelin-associated neurite-outgrowth inhibitor; Mani", "protein_names_refseq": "mani; myelin-associated neurite-outgrowth inhibitor; protein FAM168B", "tax_id": 7955, "disease": "", "pathway": " (dre:561051)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC124506.1, CK029895.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC124506.1. On or before Oct 4, 2006 this sequence version replaced XP_687059.1, XP_708642.1., [RefSeq]; Inhibitor of neuronal axonal outgrowth., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005886 plasma membrane;GO:0030424 axon;GO:0048471 perinuclear region of cytoplasm", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q08BY2-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F7S8-1", "uniprot_id": [ { "id": "E7F7S8_DANRE", "url": "https://www.uniprot.org/uniprot/E7F7S8", "type": "external" } ], "mass": 246307.0, "length": 2235, "protein_name": "Rotatin isoform X1", "gene_name": "rttn", "organism": "Zebrafish", "refseq_name": "rotatin isoform X1", "refseq_ac": [ { "id": "XP_005162716", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005162716", "type": "external" } ], "gene_names_uniprotkb": "rttn", "gene_names_refseq": "rttn", "protein_names_uniprotkb": "Rotatin isoform X1", "protein_names_refseq": "rotatin isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:100151439)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133199) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M2B9K1", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005813 centrosome;GO:0036064 ciliary basal body;GO:0005814 centriole", "go_biological_process": "GO:0007507 heart development;GO:0060297 regulation of sarcomere organization;GO:0044782 cilium organization;GO:0010457 centriole-centriole cohesion;GO:0007099 centriole replication", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7F7S8-1", "record_type": "protein", "filter_code": "0000000.0000001.010000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F8A6-1", "uniprot_id": [ { "id": "E7F8A6_DANRE", "url": "https://www.uniprot.org/uniprot/E7F8A6", "type": "external" } ], "mass": 26511.0, "length": 241, "protein_name": "B-cell lymphoma/leukemia 10", "gene_name": "bcl10", "organism": "Zebrafish", "refseq_name": "B-cell lymphoma/leukemia 10 isoform X1", "refseq_ac": [ { "id": "XP_002660738", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_002660738", "type": "external" } ], "gene_names_uniprotkb": "bcl10", "gene_names_refseq": "bcl10", "protein_names_uniprotkb": "B-cell lymphoma/leukemia 10; B-cell CLL/lymphoma 10", "protein_names_refseq": "B-cell lymphoma/leukemia 10 isoform X1", "tax_id": 7955, "disease": "extranodal marginal zone lymphoma of mucosa-associated lymphoid tissue (Disease Ontology:DOID:0050909); non-Hodgkin lymphoma (Disease Ontology:DOID:0060060); immunodeficiency 37 (Disease Ontology:DOID:0111939); malignant mesothelioma (Disease Ontology:DOID:1790)", "pathway": " (dre:100334750); (R-DRE-8866654)", "pathway_count": 2, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133177) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 4, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1RJX4", "ec_number_list": [], "go_molecular_function": "GO:0003713 transcription coactivator activity;GO:0051059 NF-kappaB binding;GO:0043422 protein kinase B binding", "go_cellular_component": "GO:0005737 cytoplasm;GO:0032449 CBM complex;GO:0005829 cytosol;GO:0045121 membrane raft", "go_biological_process": "GO:0006915 apoptotic process;GO:0045893 positive regulation of DNA-templated transcription;GO:0042981 regulation of apoptotic process;GO:0045087 innate immune response;GO:0002250 adaptive immune response", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7F8A6-1", "record_type": "protein", "filter_code": "0000000.0000011.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1JQ19-1", "uniprot_id": [ { "id": "DEPD7_DANRE", "url": "https://www.uniprot.org/uniprot/Q1JQ19", "type": "external" } ], "mass": 58757.0, "length": 515, "protein_name": "DEP domain-containing protein 7", "gene_name": "depdc7a; depdc7", "organism": "Zebrafish", "refseq_name": "DEP domain-containing protein 7", "refseq_ac": [ { "id": "NP_001038734", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001038734", "type": "external" } ], "gene_names_uniprotkb": "depdc7a; depdc7; depdc7; wu:fe36f02; zgc:136359", "gene_names_refseq": "depdc7a; depdc7; wu:fe36f02; zgc:136359", "protein_names_uniprotkb": "DEP domain-containing protein 7", "protein_names_refseq": "DEP domain-containing protein 7", "tax_id": 7955, "disease": "", "pathway": " (dre:692297)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC116517.1, BC095813.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC116517.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q501Y7", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "GO:0035556 intracellular signal transduction", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q1JQ19-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1LUM4-1", "uniprot_id": [ { "id": "Q1LUM4_DANRE", "url": "https://www.uniprot.org/uniprot/Q1LUM4", "type": "external" } ], "mass": 114299.0, "length": 1013, "protein_name": "Liprin-beta-1b", "gene_name": "ppfibp1b", "organism": "Zebrafish", "refseq_name": "liprin-beta-1b", "refseq_ac": [ { "id": "NP_001038435", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001038435", "type": "external" } ], "gene_names_uniprotkb": "ppfibp1b; si:dkey-103i16.1", "gene_names_refseq": "ppfibp1b; si:dkey-103i16.1", "protein_names_uniprotkb": "Liprin-beta-1b", "protein_names_refseq": "PTPRF interacting protein, binding protein 1b (liprin beta 1); liprin-beta-1b", "tax_id": 7955, "disease": "", "pathway": " (dre:561961); (R-DRE-388844)", "pathway_count": 2, "publication_count": 7, "publication_id_list": "15520368;25601102;25630924;28252024;32283058;33413108;40044042", "class_list": "", "function": "##Evidence-Data-START## RNAseq introns :: partial sample support SAMEA3505378, SAMEA3505381 [ECO:0000350] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000018.1. On Jun 7, 2025 this sequence version replaced NP_001038435.1., [RefSeq]; May regulate the disassembly of focal adhesions. Did not bind receptor-like tyrosine phosphatases type 2A., [UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 1, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 1, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 1, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 1, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 0, "biomarker_type": "", "glycan_count": 1, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1N9Q9", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005829 cytosol;GO:0048786 presynaptic active zone", "go_biological_process": "GO:0007528 neuromuscular junction development", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "Q1LUM4-1", "record_type": "protein", "filter_code": "0000000.0000101.010000.000000000000000001.0100000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7EXE9-1", "uniprot_id": [ { "id": "E7EXE9_DANRE", "url": "https://www.uniprot.org/uniprot/E7EXE9", "type": "external" } ], "mass": 198095.0, "length": 1766, "protein_name": "2.3.2.27; E3 ubiquitin-protein ligase RBBP6 isoform 1", "gene_name": "rbbp6", "organism": "Zebrafish", "refseq_name": "E3 ubiquitin-protein ligase RBBP6 isoform 1", "refseq_ac": [ { "id": "NP_001180603", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001180603", "type": "external" } ], "gene_names_uniprotkb": "rbbp6; im:7158869; rbbp6l", "gene_names_refseq": "im:7158869; rbbp6l; rbbp6", "protein_names_uniprotkb": "2.3.2.27; E3 ubiquitin-protein ligase RBBP6 isoform 1", "protein_names_refseq": "E3 ubiquitin-protein ligase RBBP6 isoform 1", "tax_id": 7955, "disease": "", "pathway": " (R-DRE-9013422); (R-DRE-9770562); (R-DRE-983168)", "pathway_count": 3, "publication_count": 6, "publication_id_list": "15256591;16109975;26469318;27189481;28385620;36353515", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GFIL01032280.1, SRR32588735.2610421.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505377, SAMEA3505380 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000003.1. Transcript Variant: This variant (1) represents the full-length transcript and encodes isoform 1. Sequence Note: This RefSeq record was created from genomic sequence data because no single transcript was available for the full length of the gene. The genomic coordinates used for the transcript record were based on transcript alignments., [RefSeq]", "predicted_glycosites": 2, "predicted_n_glycosites": 0, "predicted_o_glycosites": 2, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 2, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NUN3", "ec_number_list": [ { "id": "2.3.2.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.2.-", "type": "external" }, { "id": "2.3.2.27", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.2.27", "type": "external" }, { "id": "3.6.4.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.4.-", "type": "external" }, { "id": "2.7.7.6", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.7.6", "type": "external" }, { "id": "2.3.2.34", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.2.34", "type": "external" }, { "id": "3.1.3.16", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.16", "type": "external" }, { "id": "2.3.2.26", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.2.26", "type": "external" }, { "id": "6.2.1.45", "url": "https://www.rhea-db.org/rhea/?query=ec:6.2.1.45", "type": "external" }, { "id": "2.3.2.31", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.2.31", "type": "external" }, { "id": "2.7.7.19", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.7.19", "type": "external" }, { "id": "2.3.2.23", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.2.23", "type": "external" }, { "id": "2.7.1.78", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.78", "type": "external" }, { "id": "3.6.4.13", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.4.13", "type": "external" }, { "id": "3.4.19.12", "url": "https://www.rhea-db.org/rhea/?query=ec:3.4.19.12", "type": "external" }, { "id": "2.3.2.25", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.2.25", "type": "external" }, { "id": "2.7.7.52", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.7.52", "type": "external" } ], "go_molecular_function": "GO:0008270 zinc ion binding;GO:0003676 nucleic acid binding;GO:0061630 ubiquitin protein ligase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005730 nucleolus;GO:0005813 centrosome;GO:0005694 chromosome", "go_biological_process": "GO:0006397 mRNA processing;GO:0016567 protein ubiquitination;GO:0006260 DNA replication;GO:0006974 DNA damage response;GO:0006511 ubiquitin-dependent protein catabolic process", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "E7EXE9-1", "record_type": "protein", "filter_code": "0000000.0000101.010000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F0D5-1", "uniprot_id": [ { "id": "E7F0D5_DANRE", "url": "https://www.uniprot.org/uniprot/E7F0D5", "type": "external" } ], "mass": 87215.0, "length": 773, "protein_name": "Protection of telomeres protein 1", "gene_name": "pot1", "organism": "Zebrafish", "refseq_name": "protection of telomeres protein 1 isoform X1", "refseq_ac": [ { "id": "XP_005163176", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005163176", "type": "external" } ], "gene_names_uniprotkb": "pot1", "gene_names_refseq": "pot1", "protein_names_uniprotkb": "Protection of telomeres protein 1; POT1-like telomere end-binding protein", "protein_names_refseq": "protection of telomeres protein 1 isoform X1", "tax_id": 7955, "disease": "stomach cancer (Disease Ontology:DOID:10534); lung cancer (Disease Ontology:DOID:1324); cholecystitis (Disease Ontology:DOID:1949); ovarian cancer (Disease Ontology:DOID:2394); hepatocellular carcinoma (Disease Ontology:DOID:684); familial melanoma (Disease Ontology:DOID:6846); colorectal cancer (Disease Ontology:DOID:9256)", "pathway": " (dre:566847); (R-DRE-110330); (R-DRE-110331); (R-DRE-171319); (R-DRE-174430); (R-DRE-174437)", "pathway_count": 6, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133200) annotated using gene prediction method: Gnomon, supported by mRNA evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 7, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M2BA64;A0AC58IVL3;A0AC58IVL7;A0AC58IVL8", "ec_number_list": [], "go_molecular_function": "GO:0043047 single-stranded telomeric DNA binding;GO:0098505 G-rich strand telomeric DNA binding;GO:0010521 telomerase inhibitor activity", "go_cellular_component": "GO:0005654 nucleoplasm;GO:0000781 chromosome, telomeric region;GO:0000783 nuclear telomere cap complex", "go_biological_process": "GO:0000723 telomere maintenance;GO:0016233 telomere capping;GO:0032210 regulation of telomere maintenance via telomerase", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7F0D5-1", "record_type": "protein", "filter_code": "0000000.0000011.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7EYZ5-1", "uniprot_id": [ { "id": "E7EYZ5_DANRE", "url": "https://www.uniprot.org/uniprot/E7EYZ5", "type": "external" } ], "mass": 38948.0, "length": 356, "protein_name": "Enoyl-[acyl-carrier-protein] reductase, mitochondrial", "gene_name": "LOC101884755", "organism": "Zebrafish", "refseq_name": "enoyl-[acyl-carrier-protein] reductase, mitochondrial isoform X1", "refseq_ac": [ { "id": "XP_005173854", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005173854", "type": "external" } ], "gene_names_uniprotkb": "LOC101884755", "gene_names_refseq": "LOC101884755", "protein_names_uniprotkb": "Enoyl-[acyl-carrier-protein] reductase, mitochondrial; 1.3.1.104; 2-enoyl thioester reductase", "protein_names_refseq": "enoyl-[acyl-carrier-protein] reductase, mitochondrial isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:101884755)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133195) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 24, 2014 this sequence version replaced XP_005173854.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M2BL46", "ec_number_list": [], "go_molecular_function": "GO:0141148 enoyl-[acyl-carrier-protein] reductase (NADPH) activity", "go_cellular_component": "GO:0005739 mitochondrion", "go_biological_process": "GO:0006633 fatty acid biosynthetic process;GO:0006631 fatty acid metabolic process", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7EYZ5-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7FA17-1", "uniprot_id": [ { "id": "E7FA17_DANRE", "url": "https://www.uniprot.org/uniprot/E7FA17", "type": "external" } ], "mass": 77375.0, "length": 692, "protein_name": "3.4.11.18; Aminopeptidase RNPEPL1", "gene_name": "rnpepl1", "organism": "Zebrafish", "refseq_name": "aminopeptidase RNPEPL1", "refseq_ac": [ { "id": "NP_001335117", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001335117", "type": "external" } ], "gene_names_uniprotkb": "rnpepl1; fd21d09; fi33b08; wu:fd21d09; wu:fi33b08", "gene_names_refseq": "fd21d09; fi33b08; rnpepl1; wu:fd21d09; wu:fi33b08", "protein_names_uniprotkb": "3.4.11.18; Aminopeptidase RNPEPL1", "protein_names_refseq": "aminopeptidase RNPEPL1; arginyl aminopeptidase (aminopeptidase B)-like 1", "tax_id": 7955, "disease": "", "pathway": " (dre:100535895)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "26469318;27189481", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GDQH01012461.1, SRR32588717.48196531.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA4476750, SAMEA4476770 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000018.1. On Jan 14, 2017 this sequence version replaced XP_003200537.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1P4E2", "ec_number_list": [], "go_molecular_function": "GO:0008237 metallopeptidase activity;GO:0008270 zinc ion binding;GO:0004177 aminopeptidase activity;GO:0070006 metalloaminopeptidase activity;GO:0004239 initiator methionyl aminopeptidase activity", "go_cellular_component": "", "go_biological_process": "GO:0006508 proteolysis", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "E7FA17-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1LVE4-1", "uniprot_id": [ { "id": "Q1LVE4_DANRE", "url": "https://www.uniprot.org/uniprot/Q1LVE4", "type": "external" } ], "mass": 100458.0, "length": 879, "protein_name": "DNA repair protein complementing XP-C cells", "gene_name": "xpc", "organism": "Zebrafish", "refseq_name": "DNA repair protein complementing XP-C cells", "refseq_ac": [ { "id": "NP_001038675", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001038675", "type": "external" } ], "gene_names_uniprotkb": "xpc; wu:fb12d05; wu:fb12d09; zgc:113032", "gene_names_refseq": "wu:fb12d05; wu:fb12d09; xpc; zgc:113032", "protein_names_uniprotkb": "DNA repair protein complementing XP-C cells", "protein_names_refseq": "DNA repair protein complementing XP-C cells", "tax_id": 7955, "disease": "xeroderma pigmentosum (Disease Ontology:DOID:0050427); xeroderma pigmentosum group C (Disease Ontology:DOID:0110844); pancreatic cancer (Disease Ontology:DOID:1793); serous cystadenocarcinoma (Disease Ontology:DOID:3114)", "pathway": " (dre:541386); (R-DRE-3108214); (R-DRE-5696394); (R-DRE-5696395)", "pathway_count": 4, "publication_count": 10, "publication_id_list": "16109975;17662478;18764902;19237207;19328561;31942721;33544716;33631698;34390914;36470842", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: SRR32588735.330680.1, SRR32588724.1480234.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000008.1. On or before Jan 11, 2007 this sequence version replaced NP_001013531.1, XP_699695.1. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 4, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NA71", "ec_number_list": [], "go_molecular_function": "GO:0003684 damaged DNA binding;GO:0003697 single-stranded DNA binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0071942 XPC complex;GO:0000111 nucleotide-excision repair factor 2 complex", "go_biological_process": "GO:0006289 nucleotide-excision repair;GO:0006298 mismatch repair", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "Q1LVE4-1", "record_type": "protein", "filter_code": "0000000.0000111.010000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7FA75-1", "uniprot_id": [ { "id": "E7FA75_DANRE", "url": "https://www.uniprot.org/uniprot/E7FA75", "type": "external" } ], "mass": 35543.0, "length": 321, "protein_name": "CAAX prenyl protease 2", "gene_name": "rce1a", "organism": "Zebrafish", "refseq_name": "CAAX prenyl protease 2 isoform X1", "refseq_ac": [ { "id": "XP_001919229", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_001919229", "type": "external" } ], "gene_names_uniprotkb": "rce1a", "gene_names_refseq": "rce1a", "protein_names_uniprotkb": "CAAX prenyl protease 2; 3.4.26.1; Farnesylated proteins-converting enzyme 2", "protein_names_refseq": "CAAX prenyl protease 2 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:557720); (R-DRE-5689880); (R-DRE-9648002)", "pathway_count": 3, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133182) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Mar 23, 2011 this sequence version replaced XP_001919229.2. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1QH78", "ec_number_list": [ { "id": "3.6.5.2", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.5.2", "type": "external" }, { "id": "3.1.3.48", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.48", "type": "external" }, { "id": "3.4.26.1", "url": "https://www.rhea-db.org/rhea/?query=ec:3.4.26.1", "type": "external" }, { "id": "3.4.19.12", "url": "https://www.rhea-db.org/rhea/?query=ec:3.4.19.12", "type": "external" } ], "go_molecular_function": "GO:0004222 metalloendopeptidase activity;GO:0008233 peptidase activity", "go_cellular_component": "GO:0005789 endoplasmic reticulum membrane", "go_biological_process": "GO:0071586 CAAX-box protein processing;GO:0006508 proteolysis", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7FA75-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F7V2-1", "uniprot_id": [ { "id": "E7F7V2_DANRE", "url": "https://www.uniprot.org/uniprot/E7F7V2", "type": "external" } ], "mass": 143526.0, "length": 1256, "protein_name": "Ras-specific guanine nucleotide-releasing factor 1 isoform X4", "gene_name": "rasgrf1", "organism": "Zebrafish", "refseq_name": "ras-specific guanine nucleotide-releasing factor 1 isoform X4", "refseq_ac": [ { "id": "XP_002665395", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_002665395", "type": "external" } ], "gene_names_uniprotkb": "rasgrf1", "gene_names_refseq": "rasgrf1", "protein_names_uniprotkb": "Ras-specific guanine nucleotide-releasing factor 1 isoform X4", "protein_names_refseq": "ras-specific guanine nucleotide-releasing factor 1 isoform X4", "tax_id": 7955, "disease": "fetal alcohol spectrum disorder (Disease Ontology:DOID:0050696); temporal lobe epilepsy (Disease Ontology:DOID:3328)", "pathway": " (dre:568885)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133193) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 2, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1RKU8", "ec_number_list": [], "go_molecular_function": "GO:0005085 guanyl-nucleotide exchange factor activity", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "GO:0048167 regulation of synaptic plasticity;GO:0007265 Ras protein signal transduction;GO:0007264 small GTPase-mediated signal transduction", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7F7V2-1", "record_type": "protein", "filter_code": "0000000.0000011.010000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F1X7-1", "uniprot_id": [ { "id": "E7F1X7_DANRE", "url": "https://www.uniprot.org/uniprot/E7F1X7", "type": "external" } ], "mass": 104853.0, "length": 929, "protein_name": "Serine/arginine repetitive matrix protein 1", "gene_name": "srrm1", "organism": "Zebrafish", "refseq_name": "serine/arginine repetitive matrix protein 1 isoform 1", "refseq_ac": [ { "id": "NP_001352210", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001352210", "type": "external" } ], "gene_names_uniprotkb": "srrm1; wu:fb34f04; wu:fb38b06; zgc:63802", "gene_names_refseq": "srrm1; wu:fb34f04; wu:fb38b06; zgc:63802", "protein_names_uniprotkb": "Serine/arginine repetitive matrix protein 1", "protein_names_refseq": "serine/arginine repetitive matrix protein 1 isoform 1", "tax_id": 7955, "disease": "gestational diabetes (Disease Ontology:DOID:11714)", "pathway": " (dre:406751); (R-DRE-159236); (R-DRE-72163); (R-DRE-9013422)", "pathway_count": 4, "publication_count": 5, "publication_id_list": "16517001;21168434;26469318;27189481;30833759", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: SRR32588724.832390.1, SRR32588716.10026718.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000017.1. On Jun 25, 2025 this sequence version replaced NP_001352210.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M2B5D0", "ec_number_list": [], "go_molecular_function": "GO:0003723 RNA binding", "go_cellular_component": "GO:0005681 spliceosomal complex", "go_biological_process": "GO:0006397 mRNA processing;GO:0008380 RNA splicing;GO:0048024 regulation of mRNA splicing, via spliceosome", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "E7F1X7-1", "record_type": "protein", "filter_code": "0000000.0000111.010000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F266-1", "uniprot_id": [ { "id": "E7F266_DANRE", "url": "https://www.uniprot.org/uniprot/E7F266", "type": "external" } ], "mass": 43007.0, "length": 393, "protein_name": "E3 SUMO-protein ligase EGR2a isoform 1", "gene_name": "egr2a", "organism": "Zebrafish", "refseq_name": "E3 SUMO-protein ligase EGR2a isoform 1", "refseq_ac": [ { "id": "NP_001315333", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001315333", "type": "external" } ], "gene_names_uniprotkb": "egr2a; frb35", "gene_names_refseq": "egr2a; frb35", "protein_names_uniprotkb": "E3 SUMO-protein ligase EGR2a isoform 1", "protein_names_refseq": "E3 SUMO-protein ligase EGR2a isoform 1; krox-20", "tax_id": 7955, "disease": "Charcot-Marie-Tooth disease type 3 (Disease Ontology:DOID:0050540); Charcot-Marie-Tooth disease type 1D (Disease Ontology:DOID:0110150); congenital hypomyelinating neuropathy 1 (Disease Ontology:DOID:0110195); motor peripheral neuropathy (Disease Ontology:DOID:2477)", "pathway": " (dre:368241)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "12175499;15196956;18941117;19152797;19258008;33456573;33986415;35585187;36827861;37605245", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GDQH01030323.1, GDQQ01038766.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505392, SAMEA4476747 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000017.1. On Jun 16, 2016 this sequence version replaced XP_005158926.1. Transcript Variant: This variant (1) encodes the longer isoform (1). Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications., [RefSeq]; Zebrafish gene frb35 encodes a novel zinc finger protein that shares a high homology with Krx-20; the expression domains of frb35 overlap those of krx-20, [RefSeq, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 4, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1P4S0", "ec_number_list": [], "go_molecular_function": "GO:0003677 DNA binding;GO:0008270 zinc ion binding;GO:0016874 ligase activity;GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding;GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0048511 rhythmic process;GO:0006357 regulation of transcription by RNA polymerase II", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "E7F266-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F518-1", "uniprot_id": [ { "id": "E7F518_DANRE", "url": "https://www.uniprot.org/uniprot/E7F518", "type": "external" } ], "mass": 37339.0, "length": 328, "protein_name": "hypoxia-inducible factor-proline dioxygenase", "gene_name": "egln1a", "organism": "Zebrafish", "refseq_name": "egl nine homolog 1 isoform X1", "refseq_ac": [ { "id": "XP_002664281", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_002664281", "type": "external" } ], "gene_names_uniprotkb": "egln1a", "gene_names_refseq": "egln1a", "protein_names_uniprotkb": "hypoxia-inducible factor-proline dioxygenase; 1.14.11.29", "protein_names_refseq": "egl nine homolog 1 isoform X1", "tax_id": 7955, "disease": "familial erythrocytosis 3 (Disease Ontology:DOID:0080338); renal cell carcinoma (Disease Ontology:DOID:4450); polycythemia (Disease Ontology:DOID:8432)", "pathway": " (dre:100329385); (R-DRE-1234176)", "pathway_count": 2, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133188) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Mar 23, 2011 this sequence version replaced XP_002664281.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 3, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1RRD7", "ec_number_list": [ { "id": "1.14.11.29", "url": "https://www.rhea-db.org/rhea/?query=ec:1.14.11.29", "type": "external" } ], "go_molecular_function": "GO:0005506 iron ion binding;GO:0008270 zinc ion binding;GO:0031418 L-ascorbic acid binding;GO:0160082 hypoxia-inducible factor-proline dioxygenase activity;GO:0051213 dioxygenase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm", "go_biological_process": "GO:0048823 nucleate erythrocyte development;GO:0071456 cellular response to hypoxia;GO:0043523 regulation of neuron apoptotic process", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7F518-1", "record_type": "protein", "filter_code": "0000000.0000011.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F1U4-1", "uniprot_id": [ { "id": "E7F1U4_DANRE", "url": "https://www.uniprot.org/uniprot/E7F1U4", "type": "external" } ], "mass": 167960.0, "length": 1507, "protein_name": "Synaptic Ras GTPase activating protein 1b", "gene_name": "syngap1b", "organism": "Zebrafish", "refseq_name": "synaptic Ras GTPase activating protein 1b", "refseq_ac": [ { "id": "NP_001313396", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001313396", "type": "external" } ], "gene_names_uniprotkb": "syngap1b; si:dkey-246f6.1", "gene_names_refseq": "si:dkey-246f6.1; syngap1b", "protein_names_uniprotkb": "Synaptic Ras GTPase activating protein 1b", "protein_names_refseq": "synaptic Ras GTPase activating protein 1b; syngap1", "tax_id": 7955, "disease": "autism spectrum disorder (Disease Ontology:DOID:0060041); autosomal dominant intellectual developmental disorder 5 (Disease Ontology:DOID:0070035)", "pathway": " (dre:100151149); (R-DRE-5658442)", "pathway_count": 2, "publication_count": 10, "publication_id_list": "17055577;25882707;26469318;27189481;28252024;33330465;34083748;35524578;36417527;39050824", "class_list": "", "function": "##Evidence-Data-START## RNAseq introns :: single sample supports all introns SAMEA4476811, SAMN01765705 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000016.1. On May 19, 2016 this sequence version replaced XP_009290916.1. This gene encodes a Ras GTPase activating protein that is a member of the N-methyl-D-aspartate receptor complex. In mammals, the N-terminal domain of the protein contains a Ras-GAP domain, a pleckstrin homology domain, and a C2 domain that may be involved in binding of calcium and phospholipids. The C-terminal domain consists of a ten histidine repeat region, serine and tyrosine phosphorylation sites, and a T/SXV motif required for postsynaptic scaffold protein interaction. In humans, allelic variants of this gene are associated with intellectual disability and autism spectrum disorder. Morpholino knockdown of this gene in zebrafish results in neural cell death, developmental delay of mid- and hindbrain regions, seizure-like behavior, and disrupted motor behaviors. [provided by RefSeq, Nov 2016]. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence because no single transcript was available for the full length of the gene. The extent of this transcript is supported by RNA-seq and orthologous data., [RefSeq]; Both syngap1b and shank3a play novel roles in morphogenesis resulting in common brain and behavioral phenotypes., [RefSeq, PubMed]", "predicted_glycosites": 2, "predicted_n_glycosites": 0, "predicted_o_glycosites": 2, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 2, "glyco_site_count": 2, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1P913", "ec_number_list": [], "go_molecular_function": "GO:0005096 GTPase activator activity", "go_cellular_component": "", "go_biological_process": "GO:0048854 brain morphogenesis;GO:0036269 swimming behavior;GO:1902531 regulation of intracellular signal transduction", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "E7F1U4-1", "record_type": "protein", "filter_code": "0000000.0000111.010000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F5L7-1", "uniprot_id": [ { "id": "E7F5L7_DANRE", "url": "https://www.uniprot.org/uniprot/E7F5L7", "type": "external" } ], "mass": 73941.0, "length": 676, "protein_name": "Highly divergent homeobox", "gene_name": "hdx", "organism": "Zebrafish", "refseq_name": "highly divergent homeobox", "refseq_ac": [ { "id": "NP_001189423", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001189423", "type": "external" } ], "gene_names_uniprotkb": "hdx", "gene_names_refseq": "hdx", "protein_names_uniprotkb": "Highly divergent homeobox", "protein_names_refseq": "highly divergent homeobox; zmp:0000001205", "tax_id": 7955, "disease": "", "pathway": " (dre:797948)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "26469318;29877572", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: SRR32588734.2938110.1, SRR26395015.366628.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505371, SAMEA3505380 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from BC124177.1, EB968358.1, JBMGRA010000014.1 and EH606083.1. Transcript Variant: This variant (2) differs in the 5' UTR compared to variant 1. Variants 1 and 2 encode the same protein., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1P2K8", "ec_number_list": [], "go_molecular_function": "GO:0003677 DNA binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "E7F5L7-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7EZB6-1", "uniprot_id": [ { "id": "E7EZB6_DANRE", "url": "https://www.uniprot.org/uniprot/E7EZB6", "type": "external" } ], "mass": 77617.0, "length": 685, "protein_name": "Ecto-NOX disulfide-thiol exchanger 2 isoform X1", "gene_name": "enox2", "organism": "Zebrafish", "refseq_name": "ecto-NOX disulfide-thiol exchanger 2 isoform X1", "refseq_ac": [ { "id": "XP_005173205", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005173205", "type": "external" } ], "gene_names_uniprotkb": "enox2", "gene_names_refseq": "enox2", "protein_names_uniprotkb": "Ecto-NOX disulfide-thiol exchanger 2 isoform X1", "protein_names_refseq": "ecto-NOX disulfide-thiol exchanger 2 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:566327)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133189) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M2BKG9;A0AC58H7E6", "ec_number_list": [], "go_molecular_function": "GO:0003723 RNA binding;GO:0016491 oxidoreductase activity", "go_cellular_component": "GO:0005576 extracellular region;GO:0009897 external side of plasma membrane;GO:0005886 plasma membrane", "go_biological_process": "GO:0007624 ultradian rhythm", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7EZB6-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F6U3-1", "uniprot_id": [ { "id": "E7F6U3_DANRE", "url": "https://www.uniprot.org/uniprot/E7F6U3", "type": "external" } ], "mass": 51446.0, "length": 450, "protein_name": "N(6)-adenine-specific methyltransferase METTL4 isoform X1", "gene_name": "mettl4", "organism": "Zebrafish", "refseq_name": "N(6)-adenine-specific methyltransferase METTL4 isoform X1", "refseq_ac": [ { "id": "XP_689178", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_689178", "type": "external" } ], "gene_names_uniprotkb": "mettl4", "gene_names_refseq": "mettl4", "protein_names_uniprotkb": "N(6)-adenine-specific methyltransferase METTL4 isoform X1", "protein_names_refseq": "N(6)-adenine-specific methyltransferase METTL4 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:560686)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133182) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Jun 9, 2008 this sequence version replaced XP_689178.2. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8N7T6Z4", "ec_number_list": [], "go_molecular_function": "GO:0003676 nucleic acid binding;GO:0008757 S-adenosylmethionine-dependent methyltransferase activity;GO:0140640 catalytic activity, acting on a nucleic acid;GO:0009007 site-specific DNA-methyltransferase (adenine-specific) activity;GO:0008173 RNA methyltransferase activity", "go_cellular_component": "GO:0005829 cytosol", "go_biological_process": "GO:0032259 methylation", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7F6U3-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F8D8-1", "uniprot_id": [ { "id": "E7F8D8_DANRE", "url": "https://www.uniprot.org/uniprot/E7F8D8", "type": "external" } ], "mass": 187529.0, "length": 1627, "protein_name": "Protein polybromo-1", "gene_name": "pbrm1", "organism": "Zebrafish", "refseq_name": "protein polybromo-1 isoform X1", "refseq_ac": [ { "id": "XP_009304062", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009304062", "type": "external" } ], "gene_names_uniprotkb": "pbrm1", "gene_names_refseq": "pbrm1", "protein_names_uniprotkb": "Protein polybromo-1", "protein_names_refseq": "protein polybromo-1 isoform X1", "tax_id": 7955, "disease": "alcohol use disorder (Disease Ontology:DOID:1574); extrahepatic bile duct adenocarcinoma (Disease Ontology:DOID:3495); lung non-small cell carcinoma (Disease Ontology:DOID:3908); renal cell carcinoma (Disease Ontology:DOID:4450); intrahepatic cholangiocarcinoma (Disease Ontology:DOID:4928); lung small cell carcinoma (Disease Ontology:DOID:5409); Crohn's disease (Disease Ontology:DOID:8778); colorectal cancer (Disease Ontology:DOID:9256)", "pathway": " (dre:565366); (R-DRE-3214858); (R-DRE-8939243)", "pathway_count": 3, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133186) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 8, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M3B3U8", "ec_number_list": [], "go_molecular_function": "GO:0003677 DNA binding;GO:0003682 chromatin binding", "go_cellular_component": "GO:0016586 RSC-type complex;GO:0016514 SWI/SNF complex", "go_biological_process": "GO:0006338 chromatin remodeling;GO:0006351 DNA-templated transcription;GO:0006368 transcription elongation by RNA polymerase II", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7F8D8-1", "record_type": "protein", "filter_code": "0000000.0000011.010000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F2I7-1", "uniprot_id": [ { "id": "E7F2I7_DANRE", "url": "https://www.uniprot.org/uniprot/E7F2I7", "type": "external" } ], "mass": 93919.0, "length": 859, "protein_name": "Solute carrier organic anion transporter family member", "gene_name": "LOC556735; slco5a1a", "organism": "Zebrafish", "refseq_name": "solute carrier organic anion transporter family member 5A1", "refseq_ac": [ { "id": "XP_684701", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_684701", "type": "external" } ], "gene_names_uniprotkb": "LOC556735; slco5a1a; Oatp5a1; Oatp5a2; si:dkey-7l6.4; slco5a1b; slco5a1; slco5a2", "gene_names_refseq": "LOC556735", "protein_names_uniprotkb": "Solute carrier organic anion transporter family member", "protein_names_refseq": "solute carrier organic anion transporter family member 5A1", "tax_id": 7955, "disease": "", "pathway": " (dre:101883455); (dre:556735); (dre:570033)", "pathway_count": 3, "publication_count": 4, "publication_id_list": "12618376;18769618;19931635;26379158", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133199) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 9, 2008 this sequence version replaced XP_684701.2. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8N7UQP5", "ec_number_list": [], "go_molecular_function": "GO:0022857 transmembrane transporter activity", "go_cellular_component": "GO:0030141 secretory granule;GO:0030133 transport vesicle;GO:0005886 plasma membrane;GO:0016323 basolateral plasma membrane", "go_biological_process": "GO:0006811 monoatomic ion transport;GO:0055085 transmembrane transport;GO:0043252 sodium-independent organic anion transport", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "E7F2I7-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "P0C8S0-1", "uniprot_id": [ { "id": "SMAKA_DANRE", "url": "https://www.uniprot.org/uniprot/P0C8S0", "type": "external" } ], "mass": 9987.0, "length": 89, "protein_name": "A-kinase anchoring protein 19", "gene_name": "akap19", "organism": "Zebrafish", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "akap19; c9h2orf88; si:ch211-3o3.9", "gene_names_refseq": "", "protein_names_uniprotkb": "A-kinase anchoring protein 19; Small membrane A-kinase anchor protein; Small membrane AKAP; smAKAP", "protein_names_refseq": "", "tax_id": 7955, "disease": "", "pathway": " (dre:101886596)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "23594743", "class_list": "", "function": "Binds to type I regulatory subunits of protein kinase A and anchors/targets them to the plasma membrane., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0034237 protein kinase A regulatory subunit binding", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "P0C8S0-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F737-1", "uniprot_id": [ { "id": "E7F737_DANRE", "url": "https://www.uniprot.org/uniprot/E7F737", "type": "external" } ], "mass": 77020.0, "length": 706, "protein_name": "Segment polarity protein dishevelled homolog DVL-3 isoform X1", "gene_name": "dvl3b", "organism": "Zebrafish", "refseq_name": "segment polarity protein dishevelled homolog DVL-3 isoform X1", "refseq_ac": [ { "id": "XP_001920242", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_001920242", "type": "external" } ], "gene_names_uniprotkb": "dvl3b", "gene_names_refseq": "dvl3b", "protein_names_uniprotkb": "Segment polarity protein dishevelled homolog DVL-3 isoform X1", "protein_names_refseq": "segment polarity protein dishevelled homolog DVL-3 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:100149082); (R-DRE-201688); (R-DRE-4086400); (R-DRE-4641258); (R-DRE-4641262); (R-DRE-5663220)", "pathway_count": 6, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133193) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Mar 23, 2011 this sequence version replaced XP_001920242.2. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1QQP2", "ec_number_list": [], "go_molecular_function": "GO:0005109 frizzled binding", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005829 cytosol", "go_biological_process": "GO:0035556 intracellular signal transduction;GO:0016055 Wnt signaling pathway;GO:0060070 canonical Wnt signaling pathway", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7F737-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1LV22-1", "uniprot_id": [ { "id": "ATOSA_DANRE", "url": "https://www.uniprot.org/uniprot/Q1LV22", "type": "external" } ], "mass": 109985.0, "length": 989, "protein_name": "Atos homolog protein A", "gene_name": "atosa", "organism": "Zebrafish", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "atosa; fam214a; si:dkey-266j9.3", "gene_names_refseq": "", "protein_names_uniprotkb": "Atos homolog protein A", "protein_names_refseq": "", "tax_id": 7955, "disease": "", "pathway": " (dre:555595)", "pathway_count": 1, "publication_count": 3, "publication_id_list": "23594743;28252024;28658311", "class_list": "", "function": "Transcription regulator that syncronizes transcriptional and translational programs to promote macrophage invasion of tissues., [UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "G1K2M7;Q08CB9", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "Q1LV22-1", "record_type": "protein", "filter_code": "0000000.0000101.010000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F7T1-1", "uniprot_id": [ { "id": "E7F7T1_DANRE", "url": "https://www.uniprot.org/uniprot/E7F7T1", "type": "external" } ], "mass": 21499.0, "length": 189, "protein_name": "Protein phosphatase 1 regulatory subunit 1B", "gene_name": "ppp1r1b", "organism": "Zebrafish", "refseq_name": "protein phosphatase 1 regulatory subunit 1B isoform 1", "refseq_ac": [ { "id": "NP_001268852", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001268852", "type": "external" } ], "gene_names_uniprotkb": "ppp1r1b", "gene_names_refseq": "ppp1r1b", "protein_names_uniprotkb": "Protein phosphatase 1 regulatory subunit 1B; DARPP-32; Dopamine- and cAMP-regulated neuronal phosphoprotein", "protein_names_refseq": "protein phosphatase 1 regulatory subunit 1B isoform 1", "tax_id": 7955, "disease": "bipolar disorder (Disease Ontology:DOID:3312); schizophrenia (Disease Ontology:DOID:5419)", "pathway": " (dre:100884132); (R-DRE-180024)", "pathway_count": 2, "publication_count": 6, "publication_id_list": "26469318;27540357;28656378;32277946;34650032;34820905", "class_list": "", "function": "Inhibitor of protein-phosphatase 1., [UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 2, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1P5C2", "ec_number_list": [], "go_molecular_function": "GO:0004864 protein phosphatase inhibitor activity", "go_cellular_component": "GO:0005737 cytoplasm", "go_biological_process": "GO:0007165 signal transduction;GO:0035556 intracellular signal transduction", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "E7F7T1-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F647-1", "uniprot_id": [ { "id": "E7F647_DANRE", "url": "https://www.uniprot.org/uniprot/E7F647", "type": "external" } ], "mass": 111554.0, "length": 1015, "protein_name": "Protocadherin gamma-C3", "gene_name": "si:ch73-233f7.1", "organism": "Zebrafish", "refseq_name": "uncharacterized protein LOC100537710 isoform 1 precursor", "refseq_ac": [ { "id": "NP_001352109", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001352109", "type": "external" } ], "gene_names_uniprotkb": "si:ch73-233f7.1; fj33e10; wu:fj33e10", "gene_names_refseq": "fj33e10; si:ch73-233f7.1; wu:fj33e10", "protein_names_uniprotkb": "Protocadherin gamma-C3", "protein_names_refseq": "uncharacterized protein LOC100537710 isoform 1 precursor", "tax_id": 7955, "disease": "", "pathway": " (dre:100537710)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "26469318;27189481", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GFIL01014643.1, SRR32588729.16483935.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505372, SAMEA3505377 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000014.1. On Dec 4, 2025 this sequence version replaced NP_001352109.1., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1RSZ1", "ec_number_list": [], "go_molecular_function": "GO:0005509 calcium ion binding;GO:0050839 cell adhesion molecule binding", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "GO:0007156 homophilic cell adhesion via plasma membrane adhesion molecules;GO:0009653 anatomical structure morphogenesis;GO:0007155 cell adhesion", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "E7F647-1", "record_type": "protein", "filter_code": "0000000.0000101.010000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1LUD6-1", "uniprot_id": [ { "id": "Q1LUD6_DANRE", "url": "https://www.uniprot.org/uniprot/Q1LUD6", "type": "external" } ], "mass": 41268.0, "length": 357, "protein_name": "Coiled-coil domain-containing protein 106b isoform 1", "gene_name": "ccdc106b", "organism": "Zebrafish", "refseq_name": "coiled-coil domain-containing protein 106b isoform 1", "refseq_ac": [ { "id": "NP_001013323", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001013323", "type": "external" } ], "gene_names_uniprotkb": "ccdc106b; ccdc106; im:6909208; zgc:113396", "gene_names_refseq": "ccdc106b; ccdc106; im:6909208; zgc:113396", "protein_names_uniprotkb": "Coiled-coil domain-containing protein 106b isoform 1", "protein_names_refseq": "coiled-coil domain containing 106; coiled-coil domain-containing protein 106b isoform 1", "tax_id": 7955, "disease": "", "pathway": " (dre:503711)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "25434820", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GFIL01003196.1, BC090716.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000019.1. On Aug 21, 2015 this sequence version replaced NP_001013323.1. Transcript Variant: This variant (1) represents the longer transcript and encodes the longer isoform (1). Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1N4C8", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005654 nucleoplasm", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q1LUD6-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F571-1", "uniprot_id": [ { "id": "E7F571_DANRE", "url": "https://www.uniprot.org/uniprot/E7F571", "type": "external" } ], "mass": 147993.0, "length": 1332, "protein_name": "Neurabin-1", "gene_name": "ppp1r9ala", "organism": "Zebrafish", "refseq_name": "neurabin-1 isoform X1", "refseq_ac": [ { "id": "XP_700731", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_700731", "type": "external" } ], "gene_names_uniprotkb": "ppp1r9ala", "gene_names_refseq": "ppp1r9ala", "protein_names_uniprotkb": "Neurabin-1; Neurabin-I; Neural tissue-specific F-actin-binding protein I; Protein phosphatase 1 regulatory subunit 9A", "protein_names_refseq": "neurabin-1 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:571989)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133184) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Aug 1, 2013 this sequence version replaced XP_700731.5. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8N7T738", "ec_number_list": [], "go_molecular_function": "GO:0003779 actin binding;GO:0051015 actin filament binding", "go_cellular_component": "GO:0005856 cytoskeleton;GO:0045202 synapse;GO:0120025 plasma membrane bounded cell projection;GO:0005737 cytoplasm;GO:0014069 postsynaptic density", "go_biological_process": "GO:0007399 nervous system development;GO:0030154 cell differentiation;GO:0007015 actin filament organization;GO:0019722 calcium-mediated signaling;GO:0031175 neuron projection development", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7F571-1", "record_type": "protein", "filter_code": "0000000.0000001.010000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F223-1", "uniprot_id": [ { "id": "E7F223_DANRE", "url": "https://www.uniprot.org/uniprot/E7F223", "type": "external" } ], "mass": 73414.0, "length": 639, "protein_name": "Galactose-3-O-sulfotransferase 2 isoform X1", "gene_name": "gal3st2", "organism": "Zebrafish", "refseq_name": "galactose-3-O-sulfotransferase 2 isoform X1", "refseq_ac": [ { "id": "XP_683950", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_683950", "type": "external" } ], "gene_names_uniprotkb": "gal3st2", "gene_names_refseq": "gal3st2", "protein_names_uniprotkb": "Galactose-3-O-sulfotransferase 2 isoform X1", "protein_names_refseq": "galactose-3-O-sulfotransferase 2 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:556126)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133190) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Aug 1, 2013 this sequence version replaced XP_683950.5. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8N7UST0", "ec_number_list": [], "go_molecular_function": "GO:0001733 galactosylceramide sulfotransferase activity;GO:0050694 galactose 3-O-sulfotransferase activity", "go_cellular_component": "GO:0000139 Golgi membrane", "go_biological_process": "GO:0009247 glycolipid biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7F223-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F8B8-1", "uniprot_id": [ { "id": "E7F8B8_DANRE", "url": "https://www.uniprot.org/uniprot/E7F8B8", "type": "external" } ], "mass": 165695.0, "length": 1487, "protein_name": "StAR-related lipid transfer protein 13", "gene_name": "stard13b", "organism": "Zebrafish", "refseq_name": "stAR-related lipid transfer protein 13 isoform X1", "refseq_ac": [ { "id": "XP_005157695", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005157695", "type": "external" } ], "gene_names_uniprotkb": "stard13b", "gene_names_refseq": "stard13b", "protein_names_uniprotkb": "StAR-related lipid transfer protein 13; START domain-containing protein 13", "protein_names_refseq": "stAR-related lipid transfer protein 13 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:100005208); (R-DRE-8980692); (R-DRE-9013026); (R-DRE-9013106); (R-DRE-9013148)", "pathway_count": 5, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133190) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M2B4J1", "ec_number_list": [], "go_molecular_function": "GO:0005096 GTPase activator activity;GO:0008289 lipid binding", "go_cellular_component": "GO:0005811 lipid droplet;GO:0031966 mitochondrial membrane", "go_biological_process": "GO:0007165 signal transduction;GO:0030036 actin cytoskeleton organization;GO:0035023 regulation of Rho protein signal transduction", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7F8B8-1", "record_type": "protein", "filter_code": "0000000.0000001.010000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F1A1-1", "uniprot_id": [ { "id": "E7F1A1_DANRE", "url": "https://www.uniprot.org/uniprot/E7F1A1", "type": "external" } ], "mass": 55953.0, "length": 484, "protein_name": "non-specific serine/threonine protein kinase", "gene_name": "dapk2a", "organism": "Zebrafish", "refseq_name": "death-associated protein kinase 2a", "refseq_ac": [ { "id": "NP_001116536", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001116536", "type": "external" } ], "gene_names_uniprotkb": "dapk2a; dapk2; zgc:171281", "gene_names_refseq": "dapk2a; dapk2; zgc:171281", "protein_names_uniprotkb": "non-specific serine/threonine protein kinase; 2.7.11.1", "protein_names_refseq": "death-associated protein kinase 2a; death-associated protein kinase 2", "tax_id": 7955, "disease": "", "pathway": " (dre:571352)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "12477932;21873635", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC134066.1, GDQQ01035956.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000007.1. On or before Jun 13, 2009 this sequence version replaced XP_700026.3, NP_001116536.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NG25", "ec_number_list": [ { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.7.11.13", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.13", "type": "external" }, { "id": "2.7.11.25", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.25", "type": "external" }, { "id": "2.7.10.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.1", "type": "external" }, { "id": "2.7.11.22", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.22", "type": "external" }, { "id": "2.7.11.21", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.21", "type": "external" }, { "id": "2.7.11.17", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.17", "type": "external" }, { "id": "2.7.12.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.1", "type": "external" }, { "id": "2.7.12.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.2", "type": "external" }, { "id": "2.7.11.24", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.24", "type": "external" }, { "id": "2.7.10.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.2", "type": "external" }, { "id": "2.7.11.23", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.23", "type": "external" }, { "id": "2.7.1.150", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.150", "type": "external" }, { "id": "2.7.11.12", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.12", "type": "external" }, { "id": "2.7.11.39", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.39", "type": "external" }, { "id": "2.7.11.11", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.11", "type": "external" }, { "id": "2.7.1.153", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.153", "type": "external" }, { "id": "2.7.1.137", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.137", "type": "external" }, { "id": "2.7.1.154", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.154", "type": "external" }, { "id": "2.7.11.26", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.26", "type": "external" }, { "id": "2.7.11.31", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.31", "type": "external" } ], "go_molecular_function": "GO:0004674 protein serine/threonine kinase activity;GO:0005524 ATP binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm", "go_biological_process": "GO:0035556 intracellular signal transduction;GO:0043065 positive regulation of apoptotic process;GO:0006915 apoptotic process", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "E7F1A1-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F116-1", "uniprot_id": [ { "id": "E7F116_DANRE", "url": "https://www.uniprot.org/uniprot/E7F116", "type": "external" } ], "mass": 53388.0, "length": 506, "protein_name": "Mucin-13b precursor", "gene_name": "muc13b", "organism": "Zebrafish", "refseq_name": "mucin-13b precursor", "refseq_ac": [ { "id": "NP_001295479", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001295479", "type": "external" } ], "gene_names_uniprotkb": "muc13b; zgc:175131", "gene_names_refseq": "muc13b; zgc:175131", "protein_names_uniprotkb": "Mucin-13b precursor", "protein_names_refseq": "mucin-13b precursor", "tax_id": 7955, "disease": "", "pathway": " (dre:799648); (R-DRE-5621480); (R-DRE-913709); (R-DRE-9696264); (R-DRE-9696270); (R-DRE-9696273); (R-DRE-977068)", "pathway_count": 7, "publication_count": 4, "publication_id_list": "16887038;17911254;20571107;26469318", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC155327.1, GFIL01027131.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from EH494017.1, JBMGRA010000012.1 and EH520344.1. On or before May 12, 2015 this sequence version replaced NP_001107935.1, XP_009304783.1. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1P1E7", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "E7F116-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q0P4A7-1", "uniprot_id": [ { "id": "SNP47_DANRE", "url": "https://www.uniprot.org/uniprot/Q0P4A7", "type": "external" } ], "mass": 47191.0, "length": 419, "protein_name": "Synaptosomal-associated protein 47", "gene_name": "snap47", "organism": "Zebrafish", "refseq_name": "synaptosomal-associated protein 47", "refseq_ac": [ { "id": "NP_001038902", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001038902", "type": "external" } ], "gene_names_uniprotkb": "snap47; CH1073-162B20.3; zgc:153222", "gene_names_refseq": "CH1073-162B20.3; snap47; zgc:153222", "protein_names_uniprotkb": "Synaptosomal-associated protein 47; SNAP-47; Synaptosomal-associated 47 kDa protein", "protein_names_refseq": "SNAP-47; synaptosomal-associated 47 kDa protein; synaptosomal-associated protein 47; synaptosomal-associated protein, 47", "tax_id": 7955, "disease": "", "pathway": " (dre:751727)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC122195.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC122195.1., [RefSeq]; May play a role in intracellular membrane fusion., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0019905 syntaxin binding;GO:0005484 SNAP receptor activity", "go_cellular_component": "GO:0005886 plasma membrane;GO:0098793 presynapse;GO:0031201 SNARE complex", "go_biological_process": "GO:0006887 exocytosis;GO:0031629 synaptic vesicle fusion to presynaptic active zone membrane;GO:0016082 synaptic vesicle priming", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q0P4A7-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F1H0-1", "uniprot_id": [ { "id": "E7F1H0_DANRE", "url": "https://www.uniprot.org/uniprot/E7F1H0", "type": "external" } ], "mass": 42897.0, "length": 382, "protein_name": "Calcium/calmodulin-dependent protein kinase type 1 isoform X2", "gene_name": "camk1b", "organism": "Zebrafish", "refseq_name": "calcium/calmodulin-dependent protein kinase type 1 isoform X2", "refseq_ac": [ { "id": "XP_001333925", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_001333925", "type": "external" } ], "gene_names_uniprotkb": "camk1b", "gene_names_refseq": "camk1b", "protein_names_uniprotkb": "Calcium/calmodulin-dependent protein kinase type 1 isoform X2", "protein_names_refseq": "calcium/calmodulin-dependent protein kinase type 1 isoform X2", "tax_id": 7955, "disease": "", "pathway": " (dre:794026)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133186) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1PRX0", "ec_number_list": [], "go_molecular_function": "GO:0005516 calmodulin binding;GO:0005524 ATP binding;GO:0030295 protein kinase activator activity;GO:0004683 calcium/calmodulin-dependent protein kinase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0014069 postsynaptic density", "go_biological_process": "GO:0007165 signal transduction;GO:0007399 nervous system development;GO:0032880 regulation of protein localization;GO:0050807 regulation of synapse organization", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7F1H0-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7FAG7-1", "uniprot_id": [ { "id": "E7FAG7_DANRE", "url": "https://www.uniprot.org/uniprot/E7FAG7", "type": "external" } ], "mass": 43196.0, "length": 398, "protein_name": "RNA-binding motif, single-stranded-interacting protein 1 isoform X1", "gene_name": "rbms1a", "organism": "Zebrafish", "refseq_name": "RNA-binding motif, single-stranded-interacting protein 1 isoform X1", "refseq_ac": [ { "id": "XP_005155779", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005155779", "type": "external" } ], "gene_names_uniprotkb": "rbms1a", "gene_names_refseq": "rbms1a", "protein_names_uniprotkb": "RNA-binding motif, single-stranded-interacting protein 1 isoform X1", "protein_names_refseq": "RNA-binding motif, single-stranded-interacting protein 1 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:564994)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133186) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M2B275", "ec_number_list": [], "go_molecular_function": "GO:0003723 RNA binding;GO:0003730 mRNA 3'-UTR binding;GO:0008143 poly(A) binding;GO:0008266 poly(U) RNA binding", "go_cellular_component": "GO:1990904 ribonucleoprotein complex;GO:0005634 nucleus;GO:0005829 cytosol", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7FAG7-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7EZL0-1", "uniprot_id": [ { "id": "E7EZL0_DANRE", "url": "https://www.uniprot.org/uniprot/E7EZL0", "type": "external" } ], "mass": 159177.0, "length": 1446, "protein_name": "Serine/threonine-protein kinase LMTK2", "gene_name": "lmtk2", "organism": "Zebrafish", "refseq_name": "serine/threonine-protein kinase LMTK2 precursor", "refseq_ac": [ { "id": "NP_001313401", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001313401", "type": "external" } ], "gene_names_uniprotkb": "lmtk2; im:6912096", "gene_names_refseq": "im:6912096; lmtk2", "protein_names_uniprotkb": "Serine/threonine-protein kinase LMTK2; 2.7.11.1; Brain-enriched kinase; Lemur tyrosine kinase 2", "protein_names_refseq": "serine/threonine-protein kinase LMTK2 precursor; serine/threonine-protein kinase LMTK2-like", "tax_id": 7955, "disease": "cerebral cavernous malformation (Disease Ontology:DOID:0060669)", "pathway": " (dre:564666)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "25466900;26469318;26876635;28252024;33871629", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GFIL01023763.1, SRR26395012.231800.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA4476730, SAMEA4476735 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000003.1. On Jun 25, 2025 this sequence version replaced NP_001313401.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]; Phosphorylates PPP1C, phosphorylase b and CFTR., [UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1P2P9", "ec_number_list": [ { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.7.11.13", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.13", "type": "external" }, { "id": "2.7.11.25", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.25", "type": "external" }, { "id": "2.7.10.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.1", "type": "external" }, { "id": "2.7.11.22", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.22", "type": "external" }, { "id": "2.7.11.21", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.21", "type": "external" }, { "id": "2.7.11.17", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.17", "type": "external" }, { "id": "2.7.12.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.1", "type": "external" }, { "id": "2.7.12.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.2", "type": "external" }, { "id": "2.7.11.24", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.24", "type": "external" }, { "id": "2.7.10.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.2", "type": "external" }, { "id": "2.7.11.23", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.23", "type": "external" }, { "id": "2.7.1.150", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.150", "type": "external" }, { "id": "2.7.11.12", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.12", "type": "external" }, { "id": "2.7.11.39", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.39", "type": "external" }, { "id": "2.7.11.11", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.11", "type": "external" }, { "id": "2.7.1.153", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.153", "type": "external" }, { "id": "2.7.1.137", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.137", "type": "external" }, { "id": "2.7.1.154", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.154", "type": "external" }, { "id": "2.7.11.26", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.26", "type": "external" }, { "id": "2.7.11.31", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.31", "type": "external" } ], "go_molecular_function": "GO:0004674 protein serine/threonine kinase activity;GO:0005524 ATP binding;GO:0004672 protein kinase activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0016020 membrane;GO:0012505 endomembrane system", "go_biological_process": "GO:0032456 endocytic recycling", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "E7EZL0-1", "record_type": "protein", "filter_code": "0000000.0000111.010000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7EYX5-1", "uniprot_id": [ { "id": "E7EYX5_DANRE", "url": "https://www.uniprot.org/uniprot/E7EYX5", "type": "external" } ], "mass": 86844.0, "length": 756, "protein_name": "HECT-type E3 ubiquitin transferase", "gene_name": "hectd2", "organism": "Zebrafish", "refseq_name": "probable E3 ubiquitin-protein ligase HECTD2 isoform X1", "refseq_ac": [ { "id": "XP_009304826", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009304826", "type": "external" } ], "gene_names_uniprotkb": "hectd2", "gene_names_refseq": "hectd2", "protein_names_uniprotkb": "HECT-type E3 ubiquitin transferase; 2.3.2.26", "protein_names_refseq": "probable E3 ubiquitin-protein ligase HECTD2 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:562999); (R-DRE-983168)", "pathway_count": 2, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133187) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M3B7B1", "ec_number_list": [ { "id": "2.3.2.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.2.-", "type": "external" }, { "id": "2.3.2.27", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.2.27", "type": "external" }, { "id": "3.6.4.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.4.-", "type": "external" }, { "id": "2.3.2.34", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.2.34", "type": "external" }, { "id": "2.3.2.26", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.2.26", "type": "external" }, { "id": "6.2.1.45", "url": "https://www.rhea-db.org/rhea/?query=ec:6.2.1.45", "type": "external" }, { "id": "2.3.2.31", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.2.31", "type": "external" }, { "id": "2.3.2.23", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.2.23", "type": "external" }, { "id": "3.4.19.12", "url": "https://www.rhea-db.org/rhea/?query=ec:3.4.19.12", "type": "external" }, { "id": "2.3.2.25", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.2.25", "type": "external" } ], "go_molecular_function": "GO:0061630 ubiquitin protein ligase activity", "go_cellular_component": "", "go_biological_process": "GO:0000209 protein polyubiquitination", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7EYX5-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F7J7-1", "uniprot_id": [ { "id": "E7F7J7_DANRE", "url": "https://www.uniprot.org/uniprot/E7F7J7", "type": "external" } ], "mass": 70018.0, "length": 627, "protein_name": "Transmembrane glycoprotein NMB isoform X1", "gene_name": "gpnmb", "organism": "Zebrafish", "refseq_name": "transmembrane glycoprotein NMB isoform X1", "refseq_ac": [ { "id": "XP_009292522", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009292522", "type": "external" } ], "gene_names_uniprotkb": "gpnmb", "gene_names_refseq": "gpnmb", "protein_names_uniprotkb": "Transmembrane glycoprotein NMB isoform X1", "protein_names_refseq": "transmembrane glycoprotein NMB isoform X1", "tax_id": 7955, "disease": "pigment dispersion syndrome (Disease Ontology:DOID:0060680); primary localized cutaneous amyloidosis 3 (Disease Ontology:DOID:0080932)", "pathway": " (dre:563348); (R-DRE-8857538)", "pathway_count": 2, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133194) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 2, "predicted_n_glycosites": 0, "predicted_o_glycosites": 2, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 2, "glyco_site_count": 2, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M3B3J0", "ec_number_list": [], "go_molecular_function": "GO:0005178 integrin binding", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "GO:0007155 cell adhesion", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7F7J7-1", "record_type": "protein", "filter_code": "0000000.0000011.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "P51052-1", "uniprot_id": [ { "id": "MTR1C_DANRE", "url": "https://www.uniprot.org/uniprot/P51052", "type": "external" } ], "mass": 17277.0, "length": 151, "protein_name": "Melatonin receptor type 1C", "gene_name": "mtnr1c", "organism": "Zebrafish", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "mtnr1c; mel1c", "gene_names_refseq": "", "protein_names_uniprotkb": "Melatonin receptor type 1C; Mel-1C-R; Mel1C receptor; Melatonin receptor Mel1C Z2.3", "protein_names_refseq": "", "tax_id": 7955, "disease": "", "pathway": " (dre:30661)", "pathway_count": 1, "publication_count": 11, "publication_id_list": "17622340;26303298;28242321;28318435;29395088;31120653;32768192;33071966;33164759;34119649;7576645", "class_list": "", "function": "High affinity receptor for melatonin. The activity of this receptor is mediated by pertussis toxin sensitive G proteins that inhibits adenylate cyclase activity., [UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0008502 melatonin receptor activity", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "GO:0048511 rhythmic process", "synthesized_glycan_count": 0, "hit_score": 1.2, "record_id": "P51052-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7EZC0-1", "uniprot_id": [ { "id": "E7EZC0_DANRE", "url": "https://www.uniprot.org/uniprot/E7EZC0", "type": "external" } ], "mass": 200811.0, "length": 1827, "protein_name": "Protein TASOR isoform X1", "gene_name": "tasorb", "organism": "Zebrafish", "refseq_name": "protein TASOR isoform X1", "refseq_ac": [ { "id": "XP_021325606", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021325606", "type": "external" } ], "gene_names_uniprotkb": "tasorb", "gene_names_refseq": "tasorb", "protein_names_uniprotkb": "Protein TASOR isoform X1", "protein_names_refseq": "protein TASOR isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:566775); (R-DRE-9843970)", "pathway_count": 2, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133198) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1QLJ2", "ec_number_list": [], "go_molecular_function": "GO:0003682 chromatin binding", "go_cellular_component": "GO:0005654 nucleoplasm;GO:0000792 heterochromatin", "go_biological_process": "GO:0045814 negative regulation of gene expression, epigenetic;GO:0097355 protein localization to heterochromatin", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7EZC0-1", "record_type": "protein", "filter_code": "0000000.0000001.010000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F2U2-1", "uniprot_id": [ { "id": "E7F2U2_DANRE", "url": "https://www.uniprot.org/uniprot/E7F2U2", "type": "external" } ], "mass": 19899.0, "length": 176, "protein_name": "Large ribosomal subunit protein mL49", "gene_name": "mrpl49", "organism": "Zebrafish", "refseq_name": "large ribosomal subunit protein mL49", "refseq_ac": [ { "id": "NP_001373249", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001373249", "type": "external" } ], "gene_names_uniprotkb": "mrpl49; im:7160974", "gene_names_refseq": "im:7160974; mrpl49", "protein_names_uniprotkb": "Large ribosomal subunit protein mL49; 39S ribosomal protein L49, mitochondrial", "protein_names_refseq": "large ribosomal subunit protein mL49", "tax_id": 7955, "disease": "", "pathway": " (dre:558658); (R-DRE-5389840); (R-DRE-5419276); (R-DRE-9937383)", "pathway_count": 4, "publication_count": 2, "publication_id_list": "21873635;39036955", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: CT721136.2, EH606512.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505382 [ECO:0006172] ##Evidence-Data-END## ##RefSeq-Attributes-START## gene product(s) localized to mito. :: inferred from homology ##RefSeq-Attributes-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000010.1. On Jun 25, 2025 this sequence version replaced NP_001373249.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M9PU53", "ec_number_list": [], "go_molecular_function": "GO:0003735 structural constituent of ribosome", "go_cellular_component": "GO:0005762 mitochondrial large ribosomal subunit", "go_biological_process": "GO:0006412 translation", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "E7F2U2-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1L994-1", "uniprot_id": [ { "id": "PPR37_DANRE", "url": "https://www.uniprot.org/uniprot/Q1L994", "type": "external" } ], "mass": 100325.0, "length": 919, "protein_name": "Protein phosphatase 1 regulatory subunit 37", "gene_name": "ppp1r37", "organism": "Zebrafish", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "ppp1r37; im:6911359; lrrc68; si:ch211-234g24.1; wu:fc27c06", "gene_names_refseq": "", "protein_names_uniprotkb": "Protein phosphatase 1 regulatory subunit 37; Leucine-rich repeat-containing protein 68", "protein_names_refseq": "", "tax_id": 7955, "disease": "", "pathway": " (dre:562516)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "23594743;26341094", "class_list": "", "function": "May inhibit phosphatase activity of protein phosphatase 1 (PP1) complexes., [UniProtKB]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A7YXZ6;Q08C55", "ec_number_list": [], "go_molecular_function": "GO:0004864 protein phosphatase inhibitor activity", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "Q1L994-1", "record_type": "protein", "filter_code": "0000000.0000101.010000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q0P4C4-1", "uniprot_id": [ { "id": "DCAKD_DANRE", "url": "https://www.uniprot.org/uniprot/Q0P4C4", "type": "external" } ], "mass": 25811.0, "length": 229, "protein_name": "Dephospho-CoA kinase domain-containing protein", "gene_name": "dcakd", "organism": "Zebrafish", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "dcakd; zgc:153150", "gene_names_refseq": "", "protein_names_uniprotkb": "Dephospho-CoA kinase domain-containing protein", "protein_names_refseq": "", "tax_id": 7955, "disease": "neurodegeneration with brain iron accumulation 6 (Disease Ontology:DOID:0110740)", "pathway": " (dre:751733); (R-DRE-196783)", "pathway_count": 2, "publication_count": 1, "publication_id_list": "28252024", "class_list": "", "function": "", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0004140 dephospho-CoA kinase activity;GO:0005524 ATP binding", "go_cellular_component": "GO:0005737 cytoplasm", "go_biological_process": "GO:0015937 coenzyme A biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q0P4C4-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7EZQ8-1", "uniprot_id": [ { "id": "E7EZQ8_DANRE", "url": "https://www.uniprot.org/uniprot/E7EZQ8", "type": "external" } ], "mass": 60372.0, "length": 531, "protein_name": "UDP glucuronosyltransferase 5 family, polypeptide B2 precursor", "gene_name": "ugt5b1; ugt5b2", "organism": "Zebrafish", "refseq_name": "UDP glucuronosyltransferase 5 family, polypeptide B2 precursor", "refseq_ac": [ { "id": "NP_001170970", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001170970", "type": "external" } ], "gene_names_uniprotkb": "ugt5b1; ugt5b2", "gene_names_refseq": "ugt5b2", "protein_names_uniprotkb": "UDP glucuronosyltransferase 5 family, polypeptide B2 precursor", "protein_names_refseq": "UDP glucuronosyltransferase 5 family, polypeptide B2 precursor", "tax_id": 7955, "disease": "", "pathway": " (dre:100415791); (dre:100415799)", "pathway_count": 2, "publication_count": 3, "publication_id_list": "20161780;24728488;27189481", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: SRR32588722.38746735.1, SRR32588727.1667261.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000001.1. On Jun 25, 2025 this sequence version replaced NP_001170970.2. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NVR9;F1QNF5", "ec_number_list": [], "go_molecular_function": "GO:0008194 UDP-glycosyltransferase activity;GO:0015020 glucuronosyltransferase activity", "go_cellular_component": "GO:0016020 membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "E7EZQ8-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q0VFV7-1", "uniprot_id": [ { "id": "KCTD7_DANRE", "url": "https://www.uniprot.org/uniprot/Q0VFV7", "type": "external" } ], "mass": 33810.0, "length": 292, "protein_name": "BTB/POZ domain-containing protein KCTD7", "gene_name": "kctd7", "organism": "Zebrafish", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "kctd7; zgc:136884", "gene_names_refseq": "", "protein_names_uniprotkb": "BTB/POZ domain-containing protein KCTD7", "protein_names_refseq": "", "tax_id": 7955, "disease": "progressive myoclonus epilepsy 3 (Disease Ontology:DOID:0111446)", "pathway": " (dre:735248); (R-DRE-8951664); (R-DRE-983168)", "pathway_count": 3, "publication_count": 3, "publication_id_list": "23451191;26469318;33970744", "class_list": "", "function": "", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005829 cytosol;GO:0005886 plasma membrane", "go_biological_process": "GO:0051260 protein homooligomerization;GO:0060081 membrane hyperpolarization", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "Q0VFV7-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q08BL7-1", "uniprot_id": [ { "id": "GLCTK_DANRE", "url": "https://www.uniprot.org/uniprot/Q08BL7", "type": "external" } ], "mass": 52608.0, "length": 502, "protein_name": "Glycerate kinase", "gene_name": "glyctk", "organism": "Zebrafish", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "glyctk; zgc:153346", "gene_names_refseq": "", "protein_names_uniprotkb": "Glycerate kinase; 2.7.1.31", "protein_names_refseq": "", "tax_id": 7955, "disease": "D-glyceric aciduria (Disease Ontology:DOID:0111626)", "pathway": " (dre:570678); (R-DRE-70350)", "pathway_count": 2, "publication_count": 1, "publication_id_list": "26469318", "class_list": "", "function": "", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [ { "id": "2.7.1.31", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.31", "type": "external" } ], "go_molecular_function": "GO:0008887 glycerate kinase activity;GO:0005524 ATP binding;GO:0016301 kinase activity", "go_cellular_component": "GO:0005737 cytoplasm", "go_biological_process": "GO:0006468 protein phosphorylation", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q08BL7-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F0C5-1", "uniprot_id": [ { "id": "E7F0C5_DANRE", "url": "https://www.uniprot.org/uniprot/E7F0C5", "type": "external" } ], "mass": 70717.0, "length": 630, "protein_name": "Phosphatidylinositol-3,5-bisphosphate 3-phosphatase MTMR14 isoform X1", "gene_name": "mtmr14", "organism": "Zebrafish", "refseq_name": "phosphatidylinositol-3,5-bisphosphate 3-phosphatase MTMR14 isoform X1", "refseq_ac": [ { "id": "XP_002662433", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_002662433", "type": "external" } ], "gene_names_uniprotkb": "mtmr14", "gene_names_refseq": "mtmr14", "protein_names_uniprotkb": "Phosphatidylinositol-3,5-bisphosphate 3-phosphatase MTMR14 isoform X1", "protein_names_refseq": "phosphatidylinositol-3,5-bisphosphate 3-phosphatase MTMR14 isoform X1", "tax_id": 7955, "disease": "centronuclear myopathy 1 (Disease Ontology:DOID:0111223)", "pathway": " (dre:323929); (R-DRE-1632852); (R-DRE-1660499)", "pathway_count": 3, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133181) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Mar 23, 2011 this sequence version replaced XP_002662433.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1RDJ2", "ec_number_list": [], "go_molecular_function": "GO:0004438 phosphatidylinositol-3-phosphate phosphatase activity", "go_cellular_component": "", "go_biological_process": "GO:0010506 regulation of autophagy;GO:0046716 muscle cell cellular homeostasis;GO:0050881 musculoskeletal movement;GO:0043009 chordate embryonic development", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7F0C5-1", "record_type": "protein", "filter_code": "0000000.0000011.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7FAT2-1", "uniprot_id": [ { "id": "E7FAT2_DANRE", "url": "https://www.uniprot.org/uniprot/E7FAT2", "type": "external" } ], "mass": 84207.0, "length": 771, "protein_name": "Small conductance calcium-activated potassium channel protein 3 isoform X1", "gene_name": "kcnn3", "organism": "Zebrafish", "refseq_name": "small conductance calcium-activated potassium channel protein 3 isoform X1", "refseq_ac": [ { "id": "XP_001921794", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_001921794", "type": "external" } ], "gene_names_uniprotkb": "kcnn3", "gene_names_refseq": "kcnn3", "protein_names_uniprotkb": "Small conductance calcium-activated potassium channel protein 3 isoform X1", "protein_names_refseq": "small conductance calcium-activated potassium channel protein 3 isoform X1", "tax_id": 7955, "disease": "paranoid schizophrenia (Disease Ontology:DOID:1229); schizophrenia (Disease Ontology:DOID:5419)", "pathway": " (dre:570138); (R-DRE-1296052)", "pathway_count": 2, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133191) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Mar 23, 2011 this sequence version replaced XP_001921794.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 2, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1QV38", "ec_number_list": [], "go_molecular_function": "GO:0005516 calmodulin binding;GO:0016286 small conductance calcium-activated potassium channel activity", "go_cellular_component": "GO:0016020 membrane;GO:0030018 Z disc;GO:0005886 plasma membrane;GO:0043025 neuronal cell body;GO:0043005 neuron projection", "go_biological_process": "GO:0071805 potassium ion transmembrane transport;GO:0034220 monoatomic ion transmembrane transport", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7FAT2-1", "record_type": "protein", "filter_code": "0000000.0000011.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F4H6-1", "uniprot_id": [ { "id": "E7F4H6_DANRE", "url": "https://www.uniprot.org/uniprot/E7F4H6", "type": "external" } ], "mass": 69790.0, "length": 609, "protein_name": "Polypeptide N-acetylgalactosaminyltransferase", "gene_name": "galnt18b", "organism": "Zebrafish", "refseq_name": "polypeptide N-acetylgalactosaminyltransferase 18 isoform X1", "refseq_ac": [ { "id": "XP_003199061", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003199061", "type": "external" } ], "gene_names_uniprotkb": "galnt18b", "gene_names_refseq": "galnt18b", "protein_names_uniprotkb": "Polypeptide N-acetylgalactosaminyltransferase; 2.4.1.-; Protein-UDP acetylgalactosaminyltransferase", "protein_names_refseq": "polypeptide N-acetylgalactosaminyltransferase 18 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:100310831); (R-DRE-913709)", "pathway_count": 2, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133182) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1RSP0", "ec_number_list": [ { "id": "2.4.1.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.4.1.-", "type": "external" } ], "go_molecular_function": "GO:0046872 metal ion binding;GO:0016757 glycosyltransferase activity;GO:0030246 carbohydrate binding;GO:0004653 polypeptide N-acetylgalactosaminyltransferase activity", "go_cellular_component": "GO:0000139 Golgi membrane;GO:0005794 Golgi apparatus", "go_biological_process": "GO:0006493 protein O-linked glycosylation", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7F4H6-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1L8P2-1", "uniprot_id": [ { "id": "Q1L8P2_DANRE", "url": "https://www.uniprot.org/uniprot/Q1L8P2", "type": "external" } ], "mass": 60947.0, "length": 539, "protein_name": "Synaptotagmin-like protein 1", "gene_name": "sytl1", "organism": "Zebrafish", "refseq_name": "synaptotagmin-like protein 1", "refseq_ac": [ { "id": "NP_001122005", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001122005", "type": "external" } ], "gene_names_uniprotkb": "sytl1; si:dkey-228a15.3; zgc:152940", "gene_names_refseq": "si:dkey-228a15.3; sytl1; zgc:152940", "protein_names_uniprotkb": "Synaptotagmin-like protein 1; Exophilin-7", "protein_names_refseq": "synaptotagmin-like protein 1", "tax_id": 7955, "disease": "", "pathway": " (dre:777759)", "pathway_count": 1, "publication_count": 3, "publication_id_list": "12618376;21873635;26469318", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GFIL01037159.1, BC127388.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000019.1. On or before Dec 28, 2012 this sequence version replaced XP_003200682.1, NP_001071268.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NK56;A0AC58HZ82", "ec_number_list": [], "go_molecular_function": "GO:0031267 small GTPase binding;GO:0042043 neurexin family protein binding", "go_cellular_component": "GO:0005886 plasma membrane;GO:0012505 endomembrane system;GO:0070382 exocytic vesicle", "go_biological_process": "GO:0006887 exocytosis;GO:0006886 intracellular protein transport", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "Q1L8P2-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F916-1", "uniprot_id": [ { "id": "E7F916_DANRE", "url": "https://www.uniprot.org/uniprot/E7F916", "type": "external" } ], "mass": 95401.0, "length": 833, "protein_name": "Ras GTPase-activating protein 2", "gene_name": "rasa3", "organism": "Zebrafish", "refseq_name": "ras GTPase-activating protein 3 isoform X4", "refseq_ac": [ { "id": "XP_009303510", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009303510", "type": "external" } ], "gene_names_uniprotkb": "rasa3", "gene_names_refseq": "rasa3", "protein_names_uniprotkb": "Ras GTPase-activating protein 2", "protein_names_refseq": "ras GTPase-activating protein 3 isoform X4", "tax_id": 7955, "disease": "aplastic anemia (Disease Ontology:DOID:12449)", "pathway": " (dre:100318936)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133176) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M3B644", "ec_number_list": [], "go_molecular_function": "GO:0005096 GTPase activator activity;GO:0008270 zinc ion binding", "go_cellular_component": "", "go_biological_process": "GO:0046580 negative regulation of Ras protein signal transduction;GO:0072554 blood vessel lumenization;GO:0035556 intracellular signal transduction;GO:0002574 thrombocyte differentiation;GO:0043363 nucleate erythrocyte differentiation", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7F916-1", "record_type": "protein", "filter_code": "0000000.0000011.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F624-1", "uniprot_id": [ { "id": "E7F624_DANRE", "url": "https://www.uniprot.org/uniprot/E7F624", "type": "external" } ], "mass": 51398.0, "length": 452, "protein_name": "Microtubule-associated protein 6 homolog isoform X1", "gene_name": "map6a", "organism": "Zebrafish", "refseq_name": "microtubule-associated protein 6 homolog isoform X1", "refseq_ac": [ { "id": "XP_009303767", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009303767", "type": "external" } ], "gene_names_uniprotkb": "map6a", "gene_names_refseq": "map6a", "protein_names_uniprotkb": "Microtubule-associated protein 6 homolog isoform X1", "protein_names_refseq": "microtubule-associated protein 6 homolog isoform X1", "tax_id": 7955, "disease": "schizophrenia (Disease Ontology:DOID:5419)", "pathway": " (dre:100000844)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133185) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M3AX12", "ec_number_list": [], "go_molecular_function": "GO:0005516 calmodulin binding;GO:0008017 microtubule binding", "go_cellular_component": "GO:0005874 microtubule;GO:0005798 Golgi-associated vesicle;GO:0005801 cis-Golgi network", "go_biological_process": "GO:0000226 microtubule cytoskeleton organization;GO:0030705 cytoskeleton-dependent intracellular transport;GO:0070507 regulation of microtubule cytoskeleton organization", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7F624-1", "record_type": "protein", "filter_code": "0000000.0000011.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F9S8-1", "uniprot_id": [ { "id": "E7F9S8_DANRE", "url": "https://www.uniprot.org/uniprot/E7F9S8", "type": "external" } ], "mass": 59610.0, "length": 535, "protein_name": "Protein tweety homolog", "gene_name": "ttyh2", "organism": "Zebrafish", "refseq_name": "protein tweety homolog 2", "refseq_ac": [ { "id": "NP_001314737", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001314737", "type": "external" } ], "gene_names_uniprotkb": "ttyh2; zgc:92855", "gene_names_refseq": "ttyh2; zgc:92855", "protein_names_uniprotkb": "Protein tweety homolog", "protein_names_refseq": "protein tweety homolog 2; tweety homolog 2", "tax_id": 7955, "disease": "", "pathway": " (dre:436763)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "26469318;27189481", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: SRR32588730.15728938.1, SRR26395017.177331.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505388, SAMEA3505389 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000012.1. On May 26, 2016 this sequence version replaced XP_009305139.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]; Probable chloride channel., [UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1P921", "ec_number_list": [], "go_molecular_function": "GO:0005254 chloride channel activity;GO:0072320 volume-sensitive chloride channel activity;GO:0005229 intracellularly calcium-gated chloride channel activity", "go_cellular_component": "GO:0005886 plasma membrane;GO:0034707 chloride channel complex", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "E7F9S8-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F662-1", "uniprot_id": [ { "id": "E7F662_DANRE", "url": "https://www.uniprot.org/uniprot/E7F662", "type": "external" } ], "mass": 105065.0, "length": 938, "protein_name": "Ras and Rab interactor 2 isoform X1", "gene_name": "rin2a", "organism": "Zebrafish", "refseq_name": "ras and Rab interactor 2 isoform X1", "refseq_ac": [ { "id": "XP_001345314", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_001345314", "type": "external" } ], "gene_names_uniprotkb": "rin2a", "gene_names_refseq": "rin2a", "protein_names_uniprotkb": "Ras and Rab interactor 2 isoform X1", "protein_names_refseq": "ras and Rab interactor 2 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:100006622); (R-DRE-8876198)", "pathway_count": 2, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133188) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1Q7Y8", "ec_number_list": [], "go_molecular_function": "GO:0005096 GTPase activator activity;GO:0005085 guanyl-nucleotide exchange factor activity;GO:0031267 small GTPase binding", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005829 cytosol;GO:0030139 endocytic vesicle", "go_biological_process": "GO:0016192 vesicle-mediated transport;GO:1903670 regulation of sprouting angiogenesis;GO:0030947 regulation of vascular endothelial growth factor receptor signaling pathway;GO:0007165 signal transduction", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7F662-1", "record_type": "protein", "filter_code": "0000000.0000001.010000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1ECZ9-1", "uniprot_id": [ { "id": "RSRP1_DANRE", "url": "https://www.uniprot.org/uniprot/Q1ECZ9", "type": "external" } ], "mass": 36370.0, "length": 320, "protein_name": "Arginine/serine-rich protein 1", "gene_name": "rsrp1", "organism": "Zebrafish", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "rsrp1; wu:fc15g08; zgc:136474", "gene_names_refseq": "", "protein_names_uniprotkb": "Arginine/serine-rich protein 1", "protein_names_refseq": "", "tax_id": 7955, "disease": "", "pathway": " (dre:724003)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "17251491;26469318;27189481;28992598;35134499", "class_list": "", "function": "Probably acts as a spliceosomal factor that contributes to spliceosome assembly and regulates the isoform switching of proteins such as PARP6., [UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0000245 spliceosomal complex assembly", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q1ECZ9-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "B8JMA2-1", "uniprot_id": [ { "id": "B8JMA2_DANRE", "url": "https://www.uniprot.org/uniprot/B8JMA2", "type": "external" } ], "mass": 60406.0, "length": 532, "protein_name": "UDP-glucuronosyltransferase", "gene_name": "ugt2a5", "organism": "Zebrafish", "refseq_name": "UDP glucuronosyltransferase 2 family, polypeptide A5 precursor", "refseq_ac": [ { "id": "NP_001070111", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001070111", "type": "external" } ], "gene_names_uniprotkb": "ugt2a5; zgc:153113", "gene_names_refseq": "si:dkey-204e18.4; ugt2a5; ugt2a6; zgc:153113", "protein_names_uniprotkb": "UDP-glucuronosyltransferase; 2.4.1.17", "protein_names_refseq": "UDP glucuronosyltransferase 2 family, polypeptide A5 precursor; UDP glucuronosyltransferase 2 family, polypeptide A6", "tax_id": 7955, "disease": "", "pathway": " (dre:767705); (R-DRE-9753281); (R-DRE-9757110)", "pathway_count": 3, "publication_count": 4, "publication_id_list": "20161780;24728488;27189481;39108621", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC124251.1, GFIL01042688.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505376, SAMEA3505377 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000005.1. On or before Sep 16, 2025 this sequence version replaced NP_001138283.1, NP_001070111.2., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NB03", "ec_number_list": [ { "id": "2.4.1.17", "url": "https://www.rhea-db.org/rhea/?query=ec:2.4.1.17", "type": "external" } ], "go_molecular_function": "GO:0015020 glucuronosyltransferase activity", "go_cellular_component": "GO:0016020 membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "B8JMA2-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F0R9-1", "uniprot_id": [ { "id": "E7F0R9_DANRE", "url": "https://www.uniprot.org/uniprot/E7F0R9", "type": "external" } ], "mass": 144120.0, "length": 1262, "protein_name": "Paired amphipathic helix protein Sin3a", "gene_name": "sin3ab", "organism": "Zebrafish", "refseq_name": "paired amphipathic helix protein Sin3a isoform X2", "refseq_ac": [ { "id": "XP_002662923", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_002662923", "type": "external" } ], "gene_names_uniprotkb": "sin3ab", "gene_names_refseq": "sin3ab", "protein_names_uniprotkb": "Paired amphipathic helix protein Sin3a; Histone deacetylase complex subunit Sin3a; Transcriptional corepressor Sin3a", "protein_names_refseq": "paired amphipathic helix protein Sin3a isoform X2", "tax_id": 7955, "disease": "developmental disorder of mental health (Disease Ontology:DOID:0060037); chromosome 15q24 deletion syndrome (Disease Ontology:DOID:0060395); Huntington's disease (Disease Ontology:DOID:12858); cancer (Disease Ontology:DOID:162); transient cerebral ischemia (Disease Ontology:DOID:224)", "pathway": " (dre:323346)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133182) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]; Acts as a transcriptional repressor. Corepressor for REST. Interacts with MXI1 to repress MYC responsive genes and antagonize MYC oncogenic activities. Also interacts with MXD1-MAX heterodimers to repress transcription by tethering SIN3A to DNA. Acts cooperatively with OGT to repress transcription in parallel with histone deacetylation. Involved in the control of the circadian rhythms. Required for the transcriptional repression of circadian target genes, such as PER1, mediated by the large PER complex through histone deacetylation. Cooperates with FOXK1 to regulate cell cycle progression probably by repressing cell cycle inhibitor genes expression. Required for cortical neuron differentiation and callosal axon elongation., [UniProtKB, UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 5, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1RR38", "ec_number_list": [], "go_molecular_function": "GO:0003714 transcription corepressor activity;GO:0061629 RNA polymerase II-specific DNA-binding transcription factor binding", "go_cellular_component": "GO:0005730 nucleolus;GO:0000785 chromatin;GO:0070822 Sin3-type complex;GO:0005654 nucleoplasm;GO:0005694 chromosome", "go_biological_process": "GO:0000122 negative regulation of transcription by RNA polymerase II;GO:0006351 DNA-templated transcription;GO:0007507 heart development;GO:0048511 rhythmic process", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7F0R9-1", "record_type": "protein", "filter_code": "0000000.0000011.010000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F0X0-1", "uniprot_id": [ { "id": "E7F0X0_DANRE", "url": "https://www.uniprot.org/uniprot/E7F0X0", "type": "external" } ], "mass": 31502.0, "length": 276, "protein_name": "Metalloendopeptidase", "gene_name": "hce2l2", "organism": "Zebrafish", "refseq_name": "hatching enzyme 1.2 isoform X1", "refseq_ac": [ { "id": "XP_001342763", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_001342763", "type": "external" } ], "gene_names_uniprotkb": "hce2l2", "gene_names_refseq": "hce2l2", "protein_names_uniprotkb": "Metalloendopeptidase; 3.4.24.-", "protein_names_refseq": "hatching enzyme 1.2 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:100003133)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133184) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Jun 9, 2008 this sequence version replaced XP_001342763.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1PZM4", "ec_number_list": [], "go_molecular_function": "GO:0004222 metalloendopeptidase activity;GO:0008270 zinc ion binding", "go_cellular_component": "GO:0005615 extracellular space", "go_biological_process": "GO:0006508 proteolysis", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7F0X0-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F2W8-1", "uniprot_id": [ { "id": "E7F2W8_DANRE", "url": "https://www.uniprot.org/uniprot/E7F2W8", "type": "external" } ], "mass": 61285.0, "length": 552, "protein_name": "Anthrax toxin receptor 1", "gene_name": "antxr1c", "organism": "Zebrafish", "refseq_name": "anthrax toxin receptor 1 isoform X1", "refseq_ac": [ { "id": "XP_692362", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_692362", "type": "external" } ], "gene_names_uniprotkb": "antxr1c", "gene_names_refseq": "antxr1c", "protein_names_uniprotkb": "Anthrax toxin receptor 1", "protein_names_refseq": "anthrax toxin receptor 1 isoform X1", "tax_id": 7955, "disease": "triple-receptor negative breast cancer (Disease Ontology:DOID:0060081); colorectal carcinoma (Disease Ontology:DOID:0080199); GAPO syndrome (Disease Ontology:DOID:0112249); breast cancer (Disease Ontology:DOID:1612); gallbladder carcinoma (Disease Ontology:DOID:4948); colorectal cancer (Disease Ontology:DOID:9256)", "pathway": " (dre:563907)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133187) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Feb 15, 2007 this sequence version replaced XP_692362.1. COMPLETENESS: full length., [RefSeq]; Plays a role in cell attachment and migration. Interacts with extracellular matrix proteins and with the actin cytoskeleton and thereby plays an important role in normal extracellular matrix (ECM) homeostasis. Mediates adhesion of cells to type 1 collagen and gelatin, reorganization of the actin cytoskeleton and promotes cell spreading. Plays a role in the angiogenic response of cultured umbilical vein endothelial cells. May also act as a receptor for PLAU. Upon ligand binding, stimulates the phosphorylation of EGFR and ERK1/2., [UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 6, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8N7TBB2", "ec_number_list": [], "go_molecular_function": "GO:0046872 metal ion binding;GO:0038023 signaling receptor activity;GO:0004888 transmembrane signaling receptor activity", "go_cellular_component": "GO:0031258 lamellipodium membrane;GO:0031527 filopodium membrane;GO:0005886 plasma membrane;GO:0009986 cell surface", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7F2W8-1", "record_type": "protein", "filter_code": "0000000.0000011.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F2R4-1", "uniprot_id": [ { "id": "E7F2R4_DANRE", "url": "https://www.uniprot.org/uniprot/E7F2R4", "type": "external" } ], "mass": 71552.0, "length": 632, "protein_name": "Ankyrin repeat domain-containing protein 13B", "gene_name": "ankrd13b", "organism": "Zebrafish", "refseq_name": "ankyrin repeat domain-containing protein 13B", "refseq_ac": [ { "id": "NP_001025400", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001025400", "type": "external" } ], "gene_names_uniprotkb": "ankrd13b; zgc:113371", "gene_names_refseq": "ankrd13b; zgc:113371", "protein_names_uniprotkb": "Ankyrin repeat domain-containing protein 13B", "protein_names_refseq": "ankyrin repeat domain-containing protein 13B; zmp:0000000548", "tax_id": 7955, "disease": "", "pathway": " (dre:568981)", "pathway_count": 1, "publication_count": 3, "publication_id_list": "22915831;26469318;27189481", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GFIL01020875.1, SRR32588722.31635201.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA4476730, SAMEA4476732 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000015.1. On Aug 15, 2015 this sequence version replaced NP_001025400.1. Sequence Note: This RefSeq record was created from genomic sequence data because no single transcript from the same strain was available for the full length of the gene. The extent of this transcript is supported by transcript alignments and orthologous data., [RefSeq]; Ubiquitin-binding protein that specifically recognizes and binds 'Lys-63'-linked ubiquitin. Does not bind 'Lys-48'-linked ubiquitin. Positively regulates the internalization of ligand-activated EGFR by binding to the Ub moiety of ubiquitinated EGFR at the cell membrane., [UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1N7F5", "ec_number_list": [], "go_molecular_function": "GO:0140036 ubiquitin-modified protein reader activity", "go_cellular_component": "GO:0005886 plasma membrane;GO:0048471 perinuclear region of cytoplasm;GO:0005770 late endosome", "go_biological_process": "GO:0002091 negative regulation of receptor internalization;GO:0048259 regulation of receptor-mediated endocytosis", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "E7F2R4-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q08BD8-1", "uniprot_id": [ { "id": "MTRF2_DANRE", "url": "https://www.uniprot.org/uniprot/Q08BD8", "type": "external" } ], "mass": 36697.0, "length": 336, "protein_name": "Mitochondrial fission regulator 2", "gene_name": "mtfr2", "organism": "Zebrafish", "refseq_name": "mitochondrial fission regulator 2", "refseq_ac": [ { "id": "NP_001070753", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001070753", "type": "external" } ], "gene_names_uniprotkb": "mtfr2; fam54a; fb93d10; wu:fb93d10; zgc:153910", "gene_names_refseq": "fam54a; fb93d10; mtfr2; wu:fb93d10; zgc:153910", "protein_names_uniprotkb": "Mitochondrial fission regulator 2", "protein_names_refseq": "mitochondrial fission regulator 2; protein FAM54A", "tax_id": 7955, "disease": "", "pathway": " (dre:768141)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "23594743", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC124770.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## ##RefSeq-Attributes-START## gene product(s) localized to mito. :: inferred from homology ##RefSeq-Attributes-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC124770.1., [RefSeq]; May play a role in mitochondrial aerobic respiration. Can also promote mitochondrial fission (By similarity)., [UniProtKB]; Plays a role in mitochondrial aerobic respiration. Regulates mitochondrial organization and fission., [UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005739 mitochondrion", "go_biological_process": "GO:0000266 mitochondrial fission;GO:0009060 aerobic respiration", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q08BD8-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F4C3-1", "uniprot_id": [ { "id": "E7F4C3_DANRE", "url": "https://www.uniprot.org/uniprot/E7F4C3", "type": "external" } ], "mass": 56659.0, "length": 505, "protein_name": "Solute carrier family 43 member 3a", "gene_name": "slc43a3a", "organism": "Zebrafish", "refseq_name": "solute carrier family 43 member 3a", "refseq_ac": [ { "id": "NP_001188273", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001188273", "type": "external" } ], "gene_names_uniprotkb": "slc43a3a", "gene_names_refseq": "slc43a3a", "protein_names_uniprotkb": "Solute carrier family 43 member 3a", "protein_names_refseq": "solute carrier family 43 member 3a", "tax_id": 7955, "disease": "", "pathway": " (dre:572234)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "23072875;25139857;25576824;26469318;26695815", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: SRR32588718.1865768.1, SRR32588730.18624970.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505371, SAMEA3505372 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000001.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M3AUQ0", "ec_number_list": [], "go_molecular_function": "GO:0022857 transmembrane transporter activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0016020 membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "E7F4C3-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F2R5-1", "uniprot_id": [ { "id": "E7F2R5_DANRE", "url": "https://www.uniprot.org/uniprot/E7F2R5", "type": "external" } ], "mass": 75876.0, "length": 678, "protein_name": "DNA replication factor Cdt1 isoform X1", "gene_name": "cdt1", "organism": "Zebrafish", "refseq_name": "DNA replication factor Cdt1 isoform X1", "refseq_ac": [ { "id": "XP_695164", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_695164", "type": "external" } ], "gene_names_uniprotkb": "cdt1", "gene_names_refseq": "cdt1", "protein_names_uniprotkb": "DNA replication factor Cdt1 isoform X1", "protein_names_refseq": "DNA replication factor Cdt1 isoform X1", "tax_id": 7955, "disease": "Meier-Gorlin syndrome 4 (Disease Ontology:DOID:0080515)", "pathway": " (dre:566787); (R-DRE-68867); (R-DRE-68949); (R-DRE-68962); (R-DRE-69052)", "pathway_count": 5, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133182) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 9, 2008 this sequence version replaced XP_695164.2. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0A8N7T7X4", "ec_number_list": [], "go_molecular_function": "GO:0003677 DNA binding;GO:0070182 DNA polymerase binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0030174 regulation of DNA-templated DNA replication initiation;GO:0071163 DNA replication preinitiation complex assembly;GO:0000278 mitotic cell cycle;GO:0000076 DNA replication checkpoint signaling", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7F2R5-1", "record_type": "protein", "filter_code": "0000000.0000011.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7EZ61-1", "uniprot_id": [ { "id": "E7EZ61_DANRE", "url": "https://www.uniprot.org/uniprot/E7EZ61", "type": "external" } ], "mass": 105941.0, "length": 950, "protein_name": "Zinc finger protein 217", "gene_name": "znf217", "organism": "Zebrafish", "refseq_name": "zinc finger protein 217", "refseq_ac": [ { "id": "NP_001338569", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001338569", "type": "external" } ], "gene_names_uniprotkb": "znf217; fc11a05; wu:fc11a05", "gene_names_refseq": "fc11a05; wu:fc11a05; znf217", "protein_names_uniprotkb": "Zinc finger protein 217", "protein_names_refseq": "zinc finger protein 217", "tax_id": 7955, "disease": "", "pathway": " (dre:100537540)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "26469318;27189481", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GFIL01019963.1, GDQH01018045.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505377 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000023.1. On May 17, 2017 this sequence version replaced XP_005162508.1. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments., [RefSeq]", "predicted_glycosites": 2, "predicted_n_glycosites": 0, "predicted_o_glycosites": 2, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 2, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1RFV8;A0AC58IIM1;A0AC58IIN5", "ec_number_list": [], "go_molecular_function": "GO:0003677 DNA binding;GO:0008270 zinc ion binding;GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding;GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006357 regulation of transcription by RNA polymerase II;GO:0006355 regulation of DNA-templated transcription", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "E7EZ61-1", "record_type": "protein", "filter_code": "0000000.0000101.010000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7EXY5-1", "uniprot_id": [ { "id": "E7EXY5_DANRE", "url": "https://www.uniprot.org/uniprot/E7EXY5", "type": "external" } ], "mass": 89882.0, "length": 813, "protein_name": "Echinoderm microtubule-associated protein-like 1", "gene_name": "eml1", "organism": "Zebrafish", "refseq_name": "echinoderm microtubule-associated protein-like 1", "refseq_ac": [ { "id": "NP_001180527", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001180527", "type": "external" } ], "gene_names_uniprotkb": "eml1; wu:fj01a06; zgc:153105", "gene_names_refseq": "eml1; wu:fj01a06; zgc:153105", "protein_names_uniprotkb": "Echinoderm microtubule-associated protein-like 1", "protein_names_refseq": "CNG-modulin; echinoderm microtubule associated protein like 1; echinoderm microtubule-associated protein-like 1; eml1a", "tax_id": 7955, "disease": "subcortical band heterotopia (Disease Ontology:DOID:0111169); Duchenne muscular dystrophy (Disease Ontology:DOID:11723); epilepsy (Disease Ontology:DOID:1826); congenital nervous system abnormality (Disease Ontology:DOID:2490); skin melanoma (Disease Ontology:DOID:8923)", "pathway": " (dre:767643)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "17606911;24198367;26469318;35532311", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GDQH01019686.1, SRR26395062.45511.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000017.1. On Jun 25, 2025 this sequence version replaced NP_001180527.1. Sequence Note: This RefSeq record was created from genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments., [RefSeq]; We characterize light sensitivity recovery in continuously illuminated wild-type zebrafish cones and demonstrate that sensitivity recovery does not occur in the absence of EML1., [RefSeq, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 5, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NV07", "ec_number_list": [], "go_molecular_function": "GO:0008017 microtubule binding", "go_cellular_component": "GO:0005874 microtubule", "go_biological_process": "GO:0000226 microtubule cytoskeleton organization;GO:0036368 cone photoresponse recovery", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "E7EXY5-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F219-1", "uniprot_id": [ { "id": "E7F219_DANRE", "url": "https://www.uniprot.org/uniprot/E7F219", "type": "external" } ], "mass": 208098.0, "length": 1817, "protein_name": "Interferon-induced very large GTPase 1", "gene_name": "urgcp", "organism": "Zebrafish", "refseq_name": "interferon-induced very large GTPase 1", "refseq_ac": [ { "id": "XP_001344701", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_001344701", "type": "external" } ], "gene_names_uniprotkb": "urgcp", "gene_names_refseq": "urgcp", "protein_names_uniprotkb": "Interferon-induced very large GTPase 1", "protein_names_refseq": "interferon-induced very large GTPase 1", "tax_id": 7955, "disease": "", "pathway": " (dre:100005729)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133194) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Aug 1, 2013 this sequence version replaced XP_001344701.3. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1Q294", "ec_number_list": [], "go_molecular_function": "GO:0005525 GTP binding", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7F219-1", "record_type": "protein", "filter_code": "0000000.0000001.010000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F6G9-1", "uniprot_id": [ { "id": "E7F6G9_DANRE", "url": "https://www.uniprot.org/uniprot/E7F6G9", "type": "external" } ], "mass": 173946.0, "length": 1527, "protein_name": "UDP-glucose ceramide glucosyltransferase-like 1", "gene_name": "uggt2", "organism": "Zebrafish", "refseq_name": "UDP-glucose:glycoprotein glucosyltransferase 2 isoform X1", "refseq_ac": [ { "id": "XP_021334639", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021334639", "type": "external" } ], "gene_names_uniprotkb": "uggt2", "gene_names_refseq": "uggt2", "protein_names_uniprotkb": "UDP-glucose ceramide glucosyltransferase-like 1", "protein_names_refseq": "UDP-glucose:glycoprotein glucosyltransferase 2 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:497542)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133184) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]; Recognizes glycoproteins with minor folding defects. Reglucosylates single N-glycans near the misfolded part of the protein, thus providing quality control for protein folding in the endoplasmic reticulum. Reglucosylated proteins are recognized by calreticulin for recycling to the endoplasmic reticulum and refolding or degradation., [UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M9QBF2;F1Q8P8", "ec_number_list": [], "go_molecular_function": "GO:0003980 UDP-glucose:glycoprotein glucosyltransferase activity", "go_cellular_component": "GO:0005788 endoplasmic reticulum lumen", "go_biological_process": "GO:0009101 glycoprotein biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7F6G9-1", "record_type": "protein", "filter_code": "0000000.0000001.010000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F602-1", "uniprot_id": [ { "id": "E7F602_DANRE", "url": "https://www.uniprot.org/uniprot/E7F602", "type": "external" } ], "mass": 94284.0, "length": 847, "protein_name": "Mediator of RNA polymerase II transcription subunit 16", "gene_name": "med16", "organism": "Zebrafish", "refseq_name": "mediator of RNA polymerase II transcription subunit 16 isoform X1", "refseq_ac": [ { "id": "XP_005156014", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005156014", "type": "external" } ], "gene_names_uniprotkb": "med16; MED16; fc22c09; fc29h12; lppr3b; wu:fc22c09; wu:fc29h12", "gene_names_refseq": "fc22c09; fc29h12; lppr3b; med16; wu:fc22c09; wu:fc29h12", "protein_names_uniprotkb": "Mediator of RNA polymerase II transcription subunit 16; Mediator complex subunit 16", "protein_names_refseq": "mediator of RNA polymerase II transcription subunit 16 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:570199)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "21873635", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133186) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors., [UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M2B2V1", "ec_number_list": [], "go_molecular_function": "GO:0003713 transcription coactivator activity", "go_cellular_component": "GO:0016592 mediator complex", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0060261 positive regulation of transcription initiation by RNA polymerase II", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "E7F602-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F7P1-1", "uniprot_id": [ { "id": "E7F7P1_DANRE", "url": "https://www.uniprot.org/uniprot/E7F7P1", "type": "external" } ], "mass": 59662.0, "length": 496, "protein_name": "dual-specificity kinase", "gene_name": "clk4a", "organism": "Zebrafish", "refseq_name": "dual specificity protein kinase CLK4 isoform X1", "refseq_ac": [ { "id": "XP_003199888", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003199888", "type": "external" } ], "gene_names_uniprotkb": "clk4a; clk4; wu:fa26d04; wu:fb37c01", "gene_names_refseq": "clk4a; clk4; wu:fa26d04; wu:fb37c01", "protein_names_uniprotkb": "dual-specificity kinase; 2.7.12.1", "protein_names_refseq": "dual specificity protein kinase CLK4 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:321857)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "16109975;26469318", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133189) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1RNS5", "ec_number_list": [], "go_molecular_function": "GO:0004674 protein serine/threonine kinase activity;GO:0005524 ATP binding;GO:0004712 protein serine/threonine/tyrosine kinase activity;GO:0004713 protein tyrosine kinase activity", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0043484 regulation of RNA splicing", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "E7F7P1-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q08BN9-1", "uniprot_id": [ { "id": "NXPE3_DANRE", "url": "https://www.uniprot.org/uniprot/Q08BN9", "type": "external" } ], "mass": 64745.0, "length": 566, "protein_name": "NXPE family member 3", "gene_name": "nxpe3", "organism": "Zebrafish", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "nxpe3; fam55c; zgc:153086", "gene_names_refseq": "", "protein_names_uniprotkb": "NXPE family member 3; Protein FAM55C", "protein_names_refseq": "", "tax_id": 7955, "disease": "", "pathway": " (dre:564277)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "", "predicted_glycosites": 5, "predicted_n_glycosites": 5, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 5, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005576 extracellular region", "go_biological_process": "GO:0007399 nervous system development", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q08BN9-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000010000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F6D8-1", "uniprot_id": [ { "id": "E7F6D8_DANRE", "url": "https://www.uniprot.org/uniprot/E7F6D8", "type": "external" } ], "mass": 151072.0, "length": 1384, "protein_name": "Zinc finger FYVE domain-containing protein", "gene_name": "zfyve16", "organism": "Zebrafish", "refseq_name": "zinc finger FYVE domain-containing protein 16 isoform X1", "refseq_ac": [ { "id": "XP_005155592", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005155592", "type": "external" } ], "gene_names_uniprotkb": "zfyve16", "gene_names_refseq": "zfyve16", "protein_names_uniprotkb": "Zinc finger FYVE domain-containing protein", "protein_names_refseq": "zinc finger FYVE domain-containing protein 16 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:794689); (R-DRE-201451)", "pathway_count": 2, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133185) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M2B268;A0AC58GL23;E9QC55", "ec_number_list": [], "go_molecular_function": "GO:0008270 zinc ion binding;GO:0005545 1-phosphatidylinositol binding", "go_cellular_component": "GO:0005829 cytosol;GO:0031901 early endosome membrane", "go_biological_process": "GO:0016197 endosomal transport", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7F6D8-1", "record_type": "protein", "filter_code": "0000000.0000001.010000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7EXR7-1", "uniprot_id": [ { "id": "E7EXR7_DANRE", "url": "https://www.uniprot.org/uniprot/E7EXR7", "type": "external" } ], "mass": 173039.0, "length": 1606, "protein_name": "NHS-like protein 1 isoform X1", "gene_name": "nhsl1b", "organism": "Zebrafish", "refseq_name": "NHS-like protein 1 isoform X1", "refseq_ac": [ { "id": "XP_005160821", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005160821", "type": "external" } ], "gene_names_uniprotkb": "nhsl1b", "gene_names_refseq": "nhsl1b", "protein_names_uniprotkb": "NHS-like protein 1 isoform X1", "protein_names_refseq": "NHS-like protein 1 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:447799)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133195) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M2B7N3", "ec_number_list": [], "go_molecular_function": "GO:0046982 protein heterodimerization activity", "go_cellular_component": "GO:0016020 membrane", "go_biological_process": "GO:0097475 motor neuron migration;GO:0030154 cell differentiation", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7EXR7-1", "record_type": "protein", "filter_code": "0000000.0000001.010000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q08CL8-1", "uniprot_id": [ { "id": "CNO10_DANRE", "url": "https://www.uniprot.org/uniprot/Q08CL8", "type": "external" } ], "mass": 68257.0, "length": 624, "protein_name": "CCR4-NOT transcription complex subunit 10", "gene_name": "cnot10", "organism": "Zebrafish", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "cnot10; im:7139356; zgc:152939", "gene_names_refseq": "", "protein_names_uniprotkb": "CCR4-NOT transcription complex subunit 10", "protein_names_refseq": "", "tax_id": 7955, "disease": "", "pathway": " (dre:449918); (R-DRE-6804115)", "pathway_count": 2, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "Component of the CCR4-NOT complex which is one of the major cellular mRNA deadenylases and is linked to various cellular processes including bulk mRNA degradation, miRNA-mediated repression, translational repression during translational initiation and general transcription regulation., [UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q5BLH2", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0030014 CCR4-NOT complex", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0017148 negative regulation of translation;GO:0006402 mRNA catabolic process;GO:0031047 regulatory ncRNA-mediated gene silencing;GO:0006417 regulation of translation", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q08CL8-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7EY20-1", "uniprot_id": [ { "id": "E7EY20_DANRE", "url": "https://www.uniprot.org/uniprot/E7EY20", "type": "external" } ], "mass": 38260.0, "length": 345, "protein_name": "Integrin-linked kinase-associated serine/threonine phosphatase 2C", "gene_name": "ilkap", "organism": "Zebrafish", "refseq_name": "integrin-linked kinase-associated serine/threonine phosphatase 2C", "refseq_ac": [ { "id": "NP_001082973", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001082973", "type": "external" } ], "gene_names_uniprotkb": "ilkap; zgc:162985", "gene_names_refseq": "ilkap; zgc:162985", "protein_names_uniprotkb": "Integrin-linked kinase-associated serine/threonine phosphatase 2C; 3.1.3.16", "protein_names_refseq": "integrin-linked kinase-associated serine/threonine phosphatase 2C", "tax_id": 7955, "disease": "", "pathway": " (dre:100037350)", "pathway_count": 1, "publication_count": 3, "publication_id_list": "26327813;26469318;27189481", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GFIL01045857.1, SRR26395012.1035009.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000015.1. On Jun 25, 2025 this sequence version replaced NP_001082973.2. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]; Protein phosphatase that may play a role in regulation of cell cycle progression via dephosphorylation of its substrates whose appropriate phosphorylation states might be crucial for cell proliferation. Selectively associates with integrin linked kinase (ILK), to modulate cell adhesion and growth factor signaling. Inhibits the ILK-GSK3B signaling axis and may play an important role in inhibiting oncogenic transformation., [UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NEC5", "ec_number_list": [ { "id": "3.1.3.16", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.16", "type": "external" }, { "id": "3.1.3.48", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.48", "type": "external" }, { "id": "3.1.3.67", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.67", "type": "external" }, { "id": "3.1.3.27", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.27", "type": "external" } ], "go_molecular_function": "GO:0046872 metal ion binding;GO:0004722 protein serine/threonine phosphatase activity;GO:0016301 kinase activity", "go_cellular_component": "GO:0005737 cytoplasm", "go_biological_process": "GO:0007229 integrin-mediated signaling pathway;GO:0007165 signal transduction", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "E7EY20-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F049-1", "uniprot_id": [ { "id": "E7F049_DANRE", "url": "https://www.uniprot.org/uniprot/E7F049", "type": "external" } ], "mass": 142190.0, "length": 1262, "protein_name": "Kinectin isoform 1", "gene_name": "ktn1", "organism": "Zebrafish", "refseq_name": "kinectin isoform 1", "refseq_ac": [ { "id": "NP_001296258", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001296258", "type": "external" } ], "gene_names_uniprotkb": "ktn1; cb213; wu:fi20e02; wu:fi27f06", "gene_names_refseq": "cb213; ktn1; wu:fi20e02; wu:fi27f06", "protein_names_uniprotkb": "Kinectin isoform 1", "protein_names_refseq": "kinectin isoform 1", "tax_id": 7955, "disease": "", "pathway": " (dre:368207); (R-DRE-381426); (R-DRE-5625970); (R-DRE-8957275); (R-DRE-8980692); (R-DRE-9013148); (R-DRE-9013149); (R-DRE-9013408); (R-DRE-9696264); (R-DRE-9696270)", "pathway_count": 10, "publication_count": 6, "publication_id_list": "15520368;24204288;26116573;26469318;27189481;28252024", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC044389.1, SRR26395014.1404170.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000017.1, EH489828.1, EB897878.1, EB943723.1 and DY545513.1. On May 23, 2015 this sequence version replaced XP_005158941.1. Transcript Variant: This variant (1) represents the longer transcript and encodes the longer isoform (1). Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1P1K0", "ec_number_list": [], "go_molecular_function": "GO:0019894 kinesin binding", "go_cellular_component": "GO:0005789 endoplasmic reticulum membrane", "go_biological_process": "GO:0015031 protein transport;GO:0007018 microtubule-based movement", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "E7F049-1", "record_type": "protein", "filter_code": "0000000.0000101.010000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q0P485-1", "uniprot_id": [ { "id": "C85CA_DANRE", "url": "https://www.uniprot.org/uniprot/Q0P485", "type": "external" } ], "mass": 44164.0, "length": 391, "protein_name": "Coiled-coil domain-containing protein 85C-A", "gene_name": "ccdc85ca", "organism": "Zebrafish", "refseq_name": "coiled-coil domain-containing protein 85C-A", "refseq_ac": [ { "id": "NP_001038849", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001038849", "type": "external" } ], "gene_names_uniprotkb": "ccdc85ca; ccdc85c; zgc:153295", "gene_names_refseq": "ccdc85ca; ccdc85c; zgc:153295", "protein_names_uniprotkb": "Coiled-coil domain-containing protein 85C-A", "protein_names_refseq": "coiled-coil domain-containing protein 85C-A", "tax_id": 7955, "disease": "hydrocephalus (Disease Ontology:DOID:10908)", "pathway": " (dre:751667)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC122223.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505372, SAMEA3505373 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC122223.1., [RefSeq]; May play a role in cell-cell adhesion and epithelium development through its interaction with proteins of the beta-catenin family (By similarity). May play an important role in cortical development, especially in the maintenance of radial glia (By similarity)., [UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005912 adherens junction;GO:0005923 bicellular tight junction;GO:0043296 apical junction complex", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q0P485-1", "record_type": "protein", "filter_code": "0000000.0000011.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F6M0-1", "uniprot_id": [ { "id": "E7F6M0_DANRE", "url": "https://www.uniprot.org/uniprot/E7F6M0", "type": "external" } ], "mass": 43042.0, "length": 381, "protein_name": "Cytoplasmic protein", "gene_name": "nck1b", "organism": "Zebrafish", "refseq_name": "SH2/SH3 adapter protein Nck1 isoform X1", "refseq_ac": [ { "id": "XP_002666641", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_002666641", "type": "external" } ], "gene_names_uniprotkb": "nck1b", "gene_names_refseq": "nck1b", "protein_names_uniprotkb": "Cytoplasmic protein", "protein_names_refseq": "SH2/SH3 adapter protein Nck1 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:100334953); (R-DRE-186763); (R-DRE-202433); (R-DRE-2029482); (R-DRE-373753); (R-DRE-4420097); (R-DRE-5663213); (R-DRE-9013420); (R-DRE-9013424); (R-DRE-9833482)", "pathway_count": 10, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133199) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1RRX6;A0AC58ITB5;A0AC58ITB6;A0AC58ITC0;A0AC58ITC5;A0AC58ITC9;A0AC58ITD1;A0AC58ITD3;A0AC58ITD4;A0AC58ITD6;A0AC58ITD7;A0AC58ITD8;A0AC58ITD9;A0AC58ITF5;A0AC58ITF9", "ec_number_list": [], "go_molecular_function": "GO:0046875 ephrin receptor binding;GO:0030971 receptor tyrosine kinase binding;GO:0035591 signaling adaptor activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005783 endoplasmic reticulum;GO:0005829 cytosol", "go_biological_process": "GO:0006357 regulation of transcription by RNA polymerase II;GO:0016477 cell migration;GO:0048013 ephrin receptor signaling pathway;GO:1902237 positive regulation of endoplasmic reticulum stress-induced intrinsic apoptotic signaling pathway;GO:0030838 positive regulation of actin filament polymerization", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7F6M0-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7FAE6-1", "uniprot_id": [ { "id": "E7FAE6_DANRE", "url": "https://www.uniprot.org/uniprot/E7FAE6", "type": "external" } ], "mass": 56753.0, "length": 524, "protein_name": "Transmembrane protein 108 isoform X1", "gene_name": "tmem108", "organism": "Zebrafish", "refseq_name": "transmembrane protein 108 isoform X1", "refseq_ac": [ { "id": "XP_005162650", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005162650", "type": "external" } ], "gene_names_uniprotkb": "tmem108", "gene_names_refseq": "tmem108", "protein_names_uniprotkb": "Transmembrane protein 108 isoform X1", "protein_names_refseq": "transmembrane protein 108 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:563089)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133199) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M2B9F3", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005769 early endosome;GO:0014069 postsynaptic density;GO:0030424 axon;GO:0010008 endosome membrane;GO:1904115 axon cytoplasm", "go_biological_process": "GO:0008090 retrograde axonal transport;GO:0097484 dendrite extension;GO:0097106 postsynaptic density organization", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7FAE6-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7FAC3-1", "uniprot_id": [ { "id": "E7FAC3_DANRE", "url": "https://www.uniprot.org/uniprot/E7FAC3", "type": "external" } ], "mass": 124675.0, "length": 1130, "protein_name": "Uncharacterized protein si:ch211-161h7.4 isoform X1", "gene_name": "si:ch211-161h7.4", "organism": "Zebrafish", "refseq_name": "uncharacterized protein si:ch211-161h7.4 isoform X1", "refseq_ac": [ { "id": "XP_706520", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_706520", "type": "external" } ], "gene_names_uniprotkb": "si:ch211-161h7.4", "gene_names_refseq": "si:ch211-161h7.4", "protein_names_uniprotkb": "Uncharacterized protein si:ch211-161h7.4 isoform X1", "protein_names_refseq": "uncharacterized protein si:ch211-161h7.4 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:569837); (R-DRE-141430); (R-DRE-141444); (R-DRE-2467813); (R-DRE-2500257); (R-DRE-5663220)", "pathway_count": 6, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133199) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Mar 30, 2010 this sequence version replaced XP_706520.3. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8N7TEU9", "ec_number_list": [], "go_molecular_function": "GO:0019237 centromeric DNA binding", "go_cellular_component": "GO:0005634 nucleus;GO:0000776 kinetochore", "go_biological_process": "GO:0051382 kinetochore assembly;GO:0051315 attachment of mitotic spindle microtubules to kinetochore;GO:0051455 spindle attachment to meiosis I kinetochore", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7FAC3-1", "record_type": "protein", "filter_code": "0000000.0000001.010000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7EXX9-1", "uniprot_id": [ { "id": "E7EXX9_DANRE", "url": "https://www.uniprot.org/uniprot/E7EXX9", "type": "external" } ], "mass": 51325.0, "length": 460, "protein_name": "E3 ubiquitin-protein ligase Hakai", "gene_name": "LOC100002706", "organism": "Zebrafish", "refseq_name": "E3 ubiquitin-protein ligase Hakai isoform X1", "refseq_ac": [ { "id": "XP_005163097", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005163097", "type": "external" } ], "gene_names_uniprotkb": "LOC100002706; zgc:101783", "gene_names_refseq": "LOC100002706", "protein_names_uniprotkb": "E3 ubiquitin-protein ligase Hakai; 2.3.2.27; Casitas B-lineage lymphoma-transforming sequence-like protein 1; RING-type E3 ubiquitin transferase Hakai", "protein_names_refseq": "E3 ubiquitin-protein ligase Hakai isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:100002706); (R-DRE-9766229); (R-DRE-983168); (R-DRE-9958810)", "pathway_count": 4, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133200) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M2BAD1", "ec_number_list": [ { "id": "2.3.2.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.2.-", "type": "external" }, { "id": "2.3.2.27", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.2.27", "type": "external" }, { "id": "3.6.4.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.4.-", "type": "external" }, { "id": "2.3.2.34", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.2.34", "type": "external" }, { "id": "2.3.2.26", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.2.26", "type": "external" }, { "id": "6.2.1.45", "url": "https://www.rhea-db.org/rhea/?query=ec:6.2.1.45", "type": "external" }, { "id": "2.3.2.31", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.2.31", "type": "external" }, { "id": "2.3.2.23", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.2.23", "type": "external" }, { "id": "3.4.19.12", "url": "https://www.rhea-db.org/rhea/?query=ec:3.4.19.12", "type": "external" }, { "id": "2.3.2.25", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.2.25", "type": "external" } ], "go_molecular_function": "GO:0030246 carbohydrate binding;GO:0008270 zinc ion binding;GO:0061630 ubiquitin protein ligase activity", "go_cellular_component": "GO:0005576 extracellular region;GO:0036396 RNA N6-methyladenosine methyltransferase complex;GO:0005737 cytoplasm;GO:0016607 nuclear speck", "go_biological_process": "GO:0030155 regulation of cell adhesion;GO:0016567 protein ubiquitination", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7EXX9-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F9I0-1", "uniprot_id": [ { "id": "E7F9I0_DANRE", "url": "https://www.uniprot.org/uniprot/E7F9I0", "type": "external" } ], "mass": 32073.0, "length": 300, "protein_name": "cAMP-responsive element modulator isoform X1", "gene_name": "crema", "organism": "Zebrafish", "refseq_name": "cAMP-responsive element modulator isoform X1", "refseq_ac": [ { "id": "XP_068070634", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_068070634", "type": "external" } ], "gene_names_uniprotkb": "crema", "gene_names_refseq": "crema", "protein_names_uniprotkb": "cAMP-responsive element modulator isoform X1", "protein_names_refseq": "cAMP-responsive element modulator isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:555432)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133177) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0A8N7T6W6;A0AC58HTN5", "ec_number_list": [], "go_molecular_function": "GO:0003677 DNA binding;GO:0003700 DNA-binding transcription factor activity;GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific;GO:0035497 cAMP response element binding", "go_cellular_component": "GO:0005634 nucleus;GO:1990589 ATF4-CREB1 transcription factor complex", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006357 regulation of transcription by RNA polymerase II;GO:0141156 cAMP/PKA signal transduction", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7F9I0-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1LUT1-1", "uniprot_id": [ { "id": "EDC4_DANRE", "url": "https://www.uniprot.org/uniprot/Q1LUT1", "type": "external" } ], "mass": 151849.0, "length": 1384, "protein_name": "Enhancer of mRNA-decapping protein 4", "gene_name": "edc4", "organism": "Zebrafish", "refseq_name": "enhancer of mRNA-decapping protein 4", "refseq_ac": [ { "id": "NP_001038550", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001038550", "type": "external" } ], "gene_names_uniprotkb": "edc4; fe26b05; si:ch211-237c7.1; si:dkey-16n13.6; wu:fe26b05", "gene_names_refseq": "edc4; fe26b05; si:ch211-237c7.1; wu:fe26b05", "protein_names_uniprotkb": "Enhancer of mRNA-decapping protein 4", "protein_names_refseq": "autoantigen RCD8; enhancer of mRNA-decapping protein 4", "tax_id": 7955, "disease": "", "pathway": " (dre:565659); (R-DRE-430039)", "pathway_count": 2, "publication_count": 2, "publication_id_list": "23594743;40044042", "class_list": "", "function": "##Evidence-Data-START## RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BX927240.11. On Sep 1, 2006 this sequence version replaced XP_694018.1., [RefSeq]; In the process of mRNA degradation, seems to play a role in mRNA decapping., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 1, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 1, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 1, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 1, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 0, "biomarker_type": "", "glycan_count": 1, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005634 nucleus;GO:0000932 P-body", "go_biological_process": "GO:0031087 deadenylation-independent decapping of nuclear-transcribed mRNA", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "Q1LUT1-1", "record_type": "protein", "filter_code": "0000000.0000101.010000.000000000000000001.0100000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1LV74-1", "uniprot_id": [ { "id": "Q1LV74_DANRE", "url": "https://www.uniprot.org/uniprot/Q1LV74", "type": "external" } ], "mass": 23785.0, "length": 210, "protein_name": "small monomeric GTPase", "gene_name": "si:dkeyp-59c12.1", "organism": "Zebrafish", "refseq_name": "Ras-related and estrogen-regulated growth inhibitor-like protein", "refseq_ac": [ { "id": "NP_001037795", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001037795", "type": "external" } ], "gene_names_uniprotkb": "si:dkeyp-59c12.1", "gene_names_refseq": "si:dkeyp-59c12.1", "protein_names_uniprotkb": "small monomeric GTPase; 3.6.5.2", "protein_names_refseq": "Ras-related and estrogen-regulated growth inhibitor-like protein", "tax_id": 7955, "disease": "", "pathway": " (dre:555379)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "12618376", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GDQQ01014770.1, GDQH01030795.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505383, SAMEA3505387 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000018.1. On Aug 25, 2006 this sequence version replaced XP_682964.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1N953", "ec_number_list": [ { "id": "3.6.5.2", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.5.2", "type": "external" }, { "id": "3.6.5.3", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.5.3", "type": "external" }, { "id": "3.6.5.5", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.5.5", "type": "external" }, { "id": "3.6.1.5", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.1.5", "type": "external" }, { "id": "3.6.5.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.5.-", "type": "external" }, { "id": "3.6.1.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.1.-", "type": "external" }, { "id": "3.6.5.4", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.5.4", "type": "external" } ], "go_molecular_function": "GO:0005525 GTP binding;GO:0003925 G protein activity", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q1LV74-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7EY86-1", "uniprot_id": [ { "id": "E7EY86_DANRE", "url": "https://www.uniprot.org/uniprot/E7EY86", "type": "external" } ], "mass": 29437.0, "length": 258, "protein_name": "UBX domain-containing protein 2A isoform X1", "gene_name": "ubxn2a", "organism": "Zebrafish", "refseq_name": "UBX domain-containing protein 2A isoform X1", "refseq_ac": [ { "id": "XP_003200800", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003200800", "type": "external" } ], "gene_names_uniprotkb": "ubxn2a", "gene_names_refseq": "ubxn2a", "protein_names_uniprotkb": "UBX domain-containing protein 2A isoform X1", "protein_names_refseq": "UBX domain-containing protein 2A isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:100537478)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133195) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Aug 1, 2013 this sequence version replaced XP_003200800.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1RFP4", "ec_number_list": [], "go_molecular_function": "GO:0043130 ubiquitin binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005829 cytosol", "go_biological_process": "GO:0031468 nuclear membrane reassembly;GO:0000045 autophagosome assembly;GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process;GO:0061025 membrane fusion;GO:0007030 Golgi organization", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7EY86-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F8V4-1", "uniprot_id": [ { "id": "E7F8V4_DANRE", "url": "https://www.uniprot.org/uniprot/E7F8V4", "type": "external" } ], "mass": 30794.0, "length": 285, "protein_name": "Tumor necrosis factor receptor superfamily member 9a isoform X1", "gene_name": "tnfrsf9a", "organism": "Zebrafish", "refseq_name": "tumor necrosis factor receptor superfamily member 9a isoform 1 precursor", "refseq_ac": [ { "id": "NP_001428837", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001428837", "type": "external" } ], "gene_names_uniprotkb": "tnfrsf9a; zgc:136557", "gene_names_refseq": "tnfrsf9a; zgc:136557", "protein_names_uniprotkb": "Tumor necrosis factor receptor superfamily member 9a isoform X1", "protein_names_refseq": "tumor necrosis factor receptor superfamily member 9a isoform 1 precursor", "tax_id": 7955, "disease": "immunodeficiency 109 (Disease Ontology:DOID:0061078)", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: SRR32588722.10386179.1 [ECO:0000332] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000023.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M3AVK5", "ec_number_list": [], "go_molecular_function": "GO:0038023 signaling receptor activity", "go_cellular_component": "", "go_biological_process": "GO:0042127 regulation of cell population proliferation", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7F8V4-1", "record_type": "protein", "filter_code": "0000000.0000010.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1LV16-1", "uniprot_id": [ { "id": "Q1LV16_DANRE", "url": "https://www.uniprot.org/uniprot/Q1LV16", "type": "external" } ], "mass": 52496.0, "length": 474, "protein_name": "Solute carrier family 19 member 3b precursor", "gene_name": "slc19a3b", "organism": "Zebrafish", "refseq_name": "solute carrier family 19 member 3b precursor", "refseq_ac": [ { "id": "NP_001038172", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001038172", "type": "external" } ], "gene_names_uniprotkb": "slc19a3b; si:dkey-223n17.4; slc19a3", "gene_names_refseq": "si:dkey-223n17.4; slc19a3b; slc19a3", "protein_names_uniprotkb": "Solute carrier family 19 member 3b precursor", "protein_names_refseq": "solute carrier family 19 (thiamine transporter), member 3b; solute carrier family 19 member 3b precursor; solute carrier family 19, member 3", "tax_id": 7955, "disease": "biotin-responsive basal ganglia disease (Disease Ontology:DOID:0050659); chronic kidney disease (Disease Ontology:DOID:784)", "pathway": " (dre:556920)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "23328254;27189481", "class_list": "", "function": "##Evidence-Data-START## RNAseq introns :: single sample supports all introns SAMEA4476742 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000018.1. On Aug 30, 2006 this sequence version replaced XP_684946.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 2, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1N970", "ec_number_list": [], "go_molecular_function": "GO:0090482 vitamin transmembrane transporter activity", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "Q1LV16-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F640-1", "uniprot_id": [ { "id": "E7F640_DANRE", "url": "https://www.uniprot.org/uniprot/E7F640", "type": "external" } ], "mass": 92750.0, "length": 866, "protein_name": "Ataxin-7 isoform X1", "gene_name": "atxn7", "organism": "Zebrafish", "refseq_name": "ataxin-7 isoform X1", "refseq_ac": [ { "id": "XP_009304240", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009304240", "type": "external" } ], "gene_names_uniprotkb": "atxn7", "gene_names_refseq": "atxn7", "protein_names_uniprotkb": "Ataxin-7 isoform X1", "protein_names_refseq": "ataxin-7 isoform X1", "tax_id": 7955, "disease": "cone-rod dystrophy (Disease Ontology:DOID:0050572); coloboma (Disease Ontology:DOID:12270); schizophrenia (Disease Ontology:DOID:5419); nerve fibre bundle defect (Disease Ontology:DOID:5678)", "pathway": " (dre:100001490); (R-DRE-5689880)", "pathway_count": 2, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133186) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 4, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M3B6V2", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "GO:0060042 retina morphogenesis in camera-type eye;GO:0021702 cerebellar Purkinje cell differentiation;GO:0043009 chordate embryonic development;GO:0046530 photoreceptor cell differentiation;GO:0021707 cerebellar granule cell differentiation", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7F640-1", "record_type": "protein", "filter_code": "0000000.0000011.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7EYQ0-1", "uniprot_id": [ { "id": "E7EYQ0_DANRE", "url": "https://www.uniprot.org/uniprot/E7EYQ0", "type": "external" } ], "mass": 43988.0, "length": 410, "protein_name": "SERPINE1 mRNA-binding protein 1 isoform X1", "gene_name": "serbp1b", "organism": "Zebrafish", "refseq_name": "SERPINE1 mRNA-binding protein 1 isoform X1", "refseq_ac": [ { "id": "XP_005171185", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005171185", "type": "external" } ], "gene_names_uniprotkb": "serbp1b", "gene_names_refseq": "serbp1b", "protein_names_uniprotkb": "SERPINE1 mRNA-binding protein 1 isoform X1", "protein_names_refseq": "SERPINE1 mRNA-binding protein 1 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:797732)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133177) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M2BIU7", "ec_number_list": [], "go_molecular_function": "GO:0003723 RNA binding;GO:0003730 mRNA 3'-UTR binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm", "go_biological_process": "GO:0006417 regulation of translation", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7EYQ0-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F6F8-1", "uniprot_id": [ { "id": "E7F6F8_DANRE", "url": "https://www.uniprot.org/uniprot/E7F6F8", "type": "external" } ], "mass": 88119.0, "length": 781, "protein_name": "Uncharacterized protein si:ch73-95l15.5", "gene_name": "ppt2a.2; si:ch73-95l15.5", "organism": "Zebrafish", "refseq_name": "uncharacterized protein si:ch73-95l15.5", "refseq_ac": [ { "id": "XP_693996", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_693996", "type": "external" } ], "gene_names_uniprotkb": "ppt2a.2; si:ch73-95l15.5; LOC137487223; ppt2a.2; si:ch73-95l15.4; zgc:55621", "gene_names_refseq": "si:ch73-95l15.5", "protein_names_uniprotkb": "Uncharacterized protein si:ch73-95l15.5", "protein_names_refseq": "uncharacterized protein si:ch73-95l15.5", "tax_id": 7955, "disease": "neuronal ceroid lipofuscinosis (Disease Ontology:DOID:14503)", "pathway": " (dre:137487223); (dre:393135); (dre:565630)", "pathway_count": 3, "publication_count": 2, "publication_id_list": "27189481;34016526", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133190) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Aug 1, 2013 this sequence version replaced XP_693996.3. COMPLETENESS: full length., [RefSeq]; Catalyzes the cleavage of thioester bonds from S-palmitoyl-CoA or S-palmitoyl-N-acetylcysteamine (unbranched structures) but does not have activity against palmitoylcysteine or palmitoylated proteins, branched structures or bulky head groups. Conversely, hydrolyzes both long and short chain fatty acyl-CoA substrate., [UniProtKB, UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8N7T7S7;X1WE15", "ec_number_list": [ { "id": "3.1.2.2", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.2.2", "type": "external" }, { "id": "3.1.2.22", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.2.22", "type": "external" } ], "go_molecular_function": "GO:0016790 thiolester hydrolase activity;GO:0098599 palmitoyl hydrolase activity;GO:0060090 molecular adaptor activity;GO:0008270 zinc ion binding", "go_cellular_component": "GO:0005576 extracellular region;GO:0005764 lysosome;GO:0005794 Golgi apparatus;GO:0005813 centrosome", "go_biological_process": "GO:0007098 centrosome cycle;GO:1903358 regulation of Golgi organization", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "E7F6F8-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F3J2-1", "uniprot_id": [ { "id": "E7F3J2_DANRE", "url": "https://www.uniprot.org/uniprot/E7F3J2", "type": "external" } ], "mass": 85131.0, "length": 760, "protein_name": "Heterogeneous nuclear ribonucleoprotein U isoform X1", "gene_name": "hnrnpua", "organism": "Zebrafish", "refseq_name": "heterogeneous nuclear ribonucleoprotein U isoform X1", "refseq_ac": [ { "id": "XP_694691", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_694691", "type": "external" } ], "gene_names_uniprotkb": "hnrnpua", "gene_names_refseq": "hnrnpua", "protein_names_uniprotkb": "Heterogeneous nuclear ribonucleoprotein U isoform X1", "protein_names_refseq": "heterogeneous nuclear ribonucleoprotein U isoform X1", "tax_id": 7955, "disease": "developmental and epileptic encephalopathy 54 (Disease Ontology:DOID:0080418); colorectal cancer (Disease Ontology:DOID:9256)", "pathway": " (dre:566326); (R-DRE-72163); (R-DRE-72203); (R-DRE-9770562)", "pathway_count": 4, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133192) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Mar 23, 2011 this sequence version replaced XP_694691.4. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 2, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8N7UR79", "ec_number_list": [], "go_molecular_function": "GO:0003723 RNA binding;GO:1990841 promoter-specific chromatin binding", "go_cellular_component": "GO:0005634 nucleus;GO:1990904 ribonucleoprotein complex", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0045944 positive regulation of transcription by RNA polymerase II;GO:0000380 alternative mRNA splicing, via spliceosome", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7F3J2-1", "record_type": "protein", "filter_code": "0000000.0000011.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F177-1", "uniprot_id": [ { "id": "E7F177_DANRE", "url": "https://www.uniprot.org/uniprot/E7F177", "type": "external" } ], "mass": 49064.0, "length": 432, "protein_name": "Nocturnin", "gene_name": "nocta", "organism": "Zebrafish", "refseq_name": "nocturnin isoform X1", "refseq_ac": [ { "id": "XP_700794", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_700794", "type": "external" } ], "gene_names_uniprotkb": "nocta", "gene_names_refseq": "nocta", "protein_names_uniprotkb": "Nocturnin; Carbon catabolite repression 4-like protein", "protein_names_refseq": "nocturnin isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:572044)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133189) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8N7UVF4", "ec_number_list": [], "go_molecular_function": "GO:0046872 metal ion binding;GO:0004535 poly(A)-specific ribonuclease activity;GO:0000175 3'-5'-RNA exonuclease activity", "go_cellular_component": "GO:0005737 cytoplasm", "go_biological_process": "GO:0007623 circadian rhythm;GO:0006139 nucleobase-containing compound metabolic process", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7F177-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F7T2-1", "uniprot_id": [ { "id": "E7F7T2_DANRE", "url": "https://www.uniprot.org/uniprot/E7F7T2", "type": "external" } ], "mass": 28376.0, "length": 264, "protein_name": "Myelin protein zero-like 1 like", "gene_name": "mpzl1l", "organism": "Zebrafish", "refseq_name": "myelin protein zero-like 1 like precursor", "refseq_ac": [ { "id": "NP_001244269", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001244269", "type": "external" } ], "gene_names_uniprotkb": "mpzl1l; zgc:110608", "gene_names_refseq": "mpzl1l; zgc:110608", "protein_names_uniprotkb": "Myelin protein zero-like 1 like", "protein_names_refseq": "myelin protein zero-like 1 like precursor", "tax_id": 7955, "disease": "", "pathway": " (dre:555163)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "24865967;25940938;26469318;27189481;28252024", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: SRR26395013.448810.1, SRR26395014.1487306.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505371, SAMEA3505375 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000010.1. On Apr 1, 2012 this sequence version replaced XP_701836.4. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NZN4", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0016020 membrane;GO:0005886 plasma membrane", "go_biological_process": "GO:0060028 convergent extension involved in axis elongation", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "E7F7T2-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7EXZ8-1", "uniprot_id": [ { "id": "E7EXZ8_DANRE", "url": "https://www.uniprot.org/uniprot/E7EXZ8", "type": "external" } ], "mass": 27408.0, "length": 245, "protein_name": "Proline-rich protein 7 isoform X1", "gene_name": "prr7", "organism": "Zebrafish", "refseq_name": "proline-rich protein 7 isoform X1", "refseq_ac": [ { "id": "XP_005173935", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005173935", "type": "external" } ], "gene_names_uniprotkb": "prr7", "gene_names_refseq": "prr7", "protein_names_uniprotkb": "Proline-rich protein 7 isoform X1", "protein_names_refseq": "proline-rich protein 7 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:101886277)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133196) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M2BL78", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005634 nucleus;GO:0099092 postsynaptic density, intracellular component", "go_biological_process": "GO:0030178 negative regulation of Wnt signaling pathway;GO:0009950 dorsal/ventral axis specification;GO:0099527 postsynapse to nucleus signaling pathway", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7EXZ8-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F233-1", "uniprot_id": [ { "id": "E7F233_DANRE", "url": "https://www.uniprot.org/uniprot/E7F233", "type": "external" } ], "mass": 65078.0, "length": 572, "protein_name": "Golgi-associated kinase 1A isoform X1", "gene_name": "gask1a", "organism": "Zebrafish", "refseq_name": "Golgi-associated kinase 1A isoform X1", "refseq_ac": [ { "id": "XP_003200182", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003200182", "type": "external" } ], "gene_names_uniprotkb": "gask1a", "gene_names_refseq": "gask1a", "protein_names_uniprotkb": "Golgi-associated kinase 1A isoform X1", "protein_names_refseq": "Golgi-associated kinase 1A isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:100534770)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133191) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Aug 1, 2013 this sequence version replaced XP_003200182.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1RJ49", "ec_number_list": [], "go_molecular_function": "GO:0016301 kinase activity", "go_cellular_component": "GO:0005794 Golgi apparatus", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7F233-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7EY17-1", "uniprot_id": [ { "id": "E7EY17_DANRE", "url": "https://www.uniprot.org/uniprot/E7EY17", "type": "external" } ], "mass": 39654.0, "length": 350, "protein_name": "Uncharacterized protein si:dkey-210j14.3 isoform X1", "gene_name": "si:dkey-210j14.3", "organism": "Zebrafish", "refseq_name": "uncharacterized protein si:dkey-210j14.3 isoform X1", "refseq_ac": [ { "id": "XP_001342850", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_001342850", "type": "external" } ], "gene_names_uniprotkb": "si:dkey-210j14.3", "gene_names_refseq": "si:dkey-210j14.3", "protein_names_uniprotkb": "Uncharacterized protein si:dkey-210j14.3 isoform X1", "protein_names_refseq": "uncharacterized protein si:dkey-210j14.3 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:100003238)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133178) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Aug 1, 2013 this sequence version replaced XP_001342850.2. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1Q236", "ec_number_list": [], "go_molecular_function": "GO:0003677 DNA binding;GO:0008270 zinc ion binding;GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding;GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006357 regulation of transcription by RNA polymerase II", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7EY17-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F2Z6-1", "uniprot_id": [ { "id": "E7F2Z6_DANRE", "url": "https://www.uniprot.org/uniprot/E7F2Z6", "type": "external" } ], "mass": 29902.0, "length": 267, "protein_name": "Protein BTG3 isoform X1", "gene_name": "si:dkey-79d12.5", "organism": "Zebrafish", "refseq_name": "protein BTG3 isoform X1", "refseq_ac": [ { "id": "XP_003200235", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003200235", "type": "external" } ], "gene_names_uniprotkb": "si:dkey-79d12.5", "gene_names_refseq": "si:dkey-79d12.5", "protein_names_uniprotkb": "Protein BTG3 isoform X1", "protein_names_refseq": "protein BTG3 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:100538016)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133191) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Aug 1, 2013 this sequence version replaced XP_003200235.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1RJ53", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7F2Z6-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7EZJ0-1", "uniprot_id": [ { "id": "E7EZJ0_DANRE", "url": "https://www.uniprot.org/uniprot/E7EZJ0", "type": "external" } ], "mass": 66877.0, "length": 604, "protein_name": "Nucleolar protein 9 isoform X1", "gene_name": "nop9", "organism": "Zebrafish", "refseq_name": "nucleolar protein 9 isoform X1", "refseq_ac": [ { "id": "XP_002662124", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_002662124", "type": "external" } ], "gene_names_uniprotkb": "nop9", "gene_names_refseq": "nop9", "protein_names_uniprotkb": "Nucleolar protein 9 isoform X1", "protein_names_refseq": "nucleolar protein 9 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:100332577)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133177) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1RK40", "ec_number_list": [], "go_molecular_function": "GO:0003723 RNA binding", "go_cellular_component": "GO:0005730 nucleolus;GO:0030688 preribosome, small subunit precursor;GO:0030686 90S preribosome", "go_biological_process": "GO:0000447 endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA);GO:0000472 endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA);GO:0000480 endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA);GO:0000056 ribosomal small subunit export from nucleus", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7EZJ0-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q0P3X7-1", "uniprot_id": [ { "id": "CV039_DANRE", "url": "https://www.uniprot.org/uniprot/Q0P3X7", "type": "external" } ], "mass": 13037.0, "length": 108, "protein_name": "Synaptic plasticity regulator PANTS", "gene_name": "si:ch211-51h9.6", "organism": "Zebrafish", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "si:ch211-51h9.6", "gene_names_refseq": "", "protein_names_uniprotkb": "Synaptic plasticity regulator PANTS; Plasticity-associated neural transcript short", "protein_names_refseq": "", "tax_id": 7955, "disease": "", "pathway": " (dre:563100)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "26137170;26469318;27189481;37794116", "class_list": "", "function": "Negatively regulates long-term potentiation and modulates adult synaptic plasticity., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A6H8R2", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0045202 synapse;GO:0043083 synaptic cleft", "go_biological_process": "GO:1900272 negative regulation of long-term synaptic potentiation;GO:0048167 regulation of synaptic plasticity", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "Q0P3X7-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q08BG7-1", "uniprot_id": [ { "id": "SCOCA_DANRE", "url": "https://www.uniprot.org/uniprot/Q08BG7", "type": "external" } ], "mass": 13509.0, "length": 119, "protein_name": "Short coiled-coil protein A", "gene_name": "scoca", "organism": "Zebrafish", "refseq_name": "short coiled-coil protein A", "refseq_ac": [ { "id": "NP_001071027", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001071027", "type": "external" } ], "gene_names_uniprotkb": "scoca; id:ibd5102; im:7136056; scoc; zgc:153769", "gene_names_refseq": "id:ibd5102; im:7136056; scoca; scoc; zgc:153769", "protein_names_uniprotkb": "Short coiled-coil protein A", "protein_names_refseq": "short coiled-coil protein A", "tax_id": 7955, "disease": "", "pathway": " (dre:562638)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC124730.1, DV597596.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC124730.1. On or before Nov 9, 2006 this sequence version replaced XP_707671.1, XP_684828.1., [RefSeq]; Positive regulator of amino acid starvation-induced autophagy., [UniProtKB, UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0000139 Golgi membrane;GO:0005829 cytosol", "go_biological_process": "GO:0016239 positive regulation of macroautophagy;GO:0061635 regulation of protein complex stability", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q08BG7-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "B8JLE6-1", "uniprot_id": [ { "id": "B8JLE6_DANRE", "url": "https://www.uniprot.org/uniprot/B8JLE6", "type": "external" } ], "mass": 80038.0, "length": 706, "protein_name": "Ras and EF-hand domain-containing protein", "gene_name": "rasef", "organism": "Zebrafish", "refseq_name": "ras and EF-hand domain-containing protein", "refseq_ac": [ { "id": "XP_699335", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_699335", "type": "external" } ], "gene_names_uniprotkb": "rasef", "gene_names_refseq": "rasef", "protein_names_uniprotkb": "Ras and EF-hand domain-containing protein", "protein_names_refseq": "ras and EF-hand domain-containing protein", "tax_id": 7955, "disease": "", "pathway": " (dre:570731)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133183) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Mar 30, 2010 this sequence version replaced XP_699335.3. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8N7T8D3", "ec_number_list": [], "go_molecular_function": "GO:0003924 GTPase activity;GO:0005525 GTP binding;GO:0005509 calcium ion binding", "go_cellular_component": "GO:0005737 cytoplasm", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "B8JLE6-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "B8JLG4-1", "uniprot_id": [ { "id": "B8JLG4_DANRE", "url": "https://www.uniprot.org/uniprot/B8JLG4", "type": "external" } ], "mass": 23611.0, "length": 219, "protein_name": "Claudin", "gene_name": "cldn15la", "organism": "Zebrafish", "refseq_name": "claudin 15-like a", "refseq_ac": [ { "id": "NP_571846", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_571846", "type": "external" } ], "gene_names_uniprotkb": "cldn15la; cldn10l1a; cldn10l; cldn10", "gene_names_refseq": "cldn10l1a; cldn10l; cldn10; cldn15la", "protein_names_uniprotkb": "Claudin", "protein_names_refseq": "claudin 10 like; claudin 10-like 1a; claudin 15-like a", "tax_id": 7955, "disease": "", "pathway": " (dre:81591)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "16630661;20553723;23726886;24504339;26469318;31474562;33275893;34495314;35840681;36879441", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: EH495796.1, AF359427.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505371, SAMEA3505376 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from EH495796.1, EH507578.1 and EH533727.1. On Apr 4, 2014 this sequence version replaced NP_571846.1. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications., [RefSeq]; Claudins function as major constituents of the tight junction complexes that regulate the permeability of epithelia., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1PCX0", "ec_number_list": [], "go_molecular_function": "GO:0005198 structural molecule activity", "go_cellular_component": "GO:0005886 plasma membrane;GO:0005923 bicellular tight junction", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "B8JLG4-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "B8JLJ3-1", "uniprot_id": [ { "id": "B8JLJ3_DANRE", "url": "https://www.uniprot.org/uniprot/B8JLJ3", "type": "external" } ], "mass": 27962.0, "length": 244, "protein_name": "14-3-3 protein zeta/delta", "gene_name": "ywhaz", "organism": "Zebrafish", "refseq_name": "14-3-3 protein zeta/delta", "refseq_ac": [ { "id": "NP_997922", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_997922", "type": "external" } ], "gene_names_uniprotkb": "ywhaz; fb14h09; wu:fb05g08; wu:fb14h09; ywhai; zgc:55807", "gene_names_refseq": "fb14h09; wu:fb05g08; wu:fb14h09; ywhai; ywhaz; zgc:55807", "protein_names_uniprotkb": "14-3-3 protein zeta/delta", "protein_names_refseq": "14-3-3 protein zeta/delta; tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, iota polypeptide", "tax_id": 7955, "disease": "temporal lobe epilepsy (Disease Ontology:DOID:3328); schizophrenia (Disease Ontology:DOID:5419); hepatocellular carcinoma (Disease Ontology:DOID:684)", "pathway": " (dre:336610)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "16412219;17127101;17548429;24714733;26469318;28252024;29653226;35501409;37259581", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: EH540739.1, BC051156.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA4476774 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from EH540739.1, EH472978.1, EH563192.1, EH481441.1 and BI476286.1. On or before Jun 26, 2015 this sequence version replaced XP_005159640.1, NP_997922.1. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications., [RefSeq]; Deficiency of the ywhaz gene, involved in neurodevelopmental disorders, alters brain activity and behaviour in zebrafish., [RefSeq, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 3, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1PI77", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005737 cytoplasm", "go_biological_process": "GO:0007165 signal transduction;GO:0008104 intracellular protein localization", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "B8JLJ3-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "B8JLL8-1", "uniprot_id": [ { "id": "B8JLL8_DANRE", "url": "https://www.uniprot.org/uniprot/B8JLL8", "type": "external" } ], "mass": 16328.0, "length": 149, "protein_name": "Transthyretin", "gene_name": "ttr", "organism": "Zebrafish", "refseq_name": "transthyretin precursor", "refseq_ac": [ { "id": "NP_001005598", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001005598", "type": "external" } ], "gene_names_uniprotkb": "ttr; zgc:103583", "gene_names_refseq": "ttr; zgc:103583", "protein_names_uniprotkb": "Transthyretin", "protein_names_refseq": "transthyretin precursor", "tax_id": 7955, "disease": "hereditary systemic amyloidosis 1 (Disease Ontology:DOID:0050638); colorectal adenoma (Disease Ontology:DOID:0050860); oral squamous cell carcinoma (Disease Ontology:DOID:0050866); carpal tunnel syndrome 1 (Disease Ontology:DOID:0070466); dystransthyretinemic hyperthyroxinemia (Disease Ontology:DOID:0080219); stomach cancer (Disease Ontology:DOID:10534); Alzheimer's disease (Disease Ontology:DOID:10652); lung cancer (Disease Ontology:DOID:1324); lung non-small cell carcinoma (Disease Ontology:DOID:3908); cholangiocarcinoma (Disease Ontology:DOID:4947); hepatocellular carcinoma (Disease Ontology:DOID:684); amyloidosis (Disease Ontology:DOID:9120); colorectal cancer (Disease Ontology:DOID:9256)", "pathway": " (dre:449556); (R-DRE-2453902); (R-DRE-6798695); (R-DRE-975634)", "pathway_count": 4, "publication_count": 10, "publication_id_list": "16952372;19703701;19945756;20074802;20941541;36396123;36460297;36724876;37600710;38717324", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC081488.1, CN167258.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000020.1. On or before Jan 22, 2011 this sequence version replaced XP_002665698.1, NP_001005598.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications., [RefSeq]; Thyroid hormone-binding protein. Probably transports thyroxine from the bloodstream to the brain., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 13, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1N2H6", "ec_number_list": [], "go_molecular_function": "GO:0070324 thyroid hormone binding;GO:0005179 hormone activity", "go_cellular_component": "GO:0005576 extracellular region", "go_biological_process": "GO:0006144 purine nucleobase metabolic process", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "B8JLL8-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "B8JLN4-1", "uniprot_id": [ { "id": "B8JLN4_DANRE", "url": "https://www.uniprot.org/uniprot/B8JLN4", "type": "external" } ], "mass": 46471.0, "length": 429, "protein_name": "Transcription factor E2F3", "gene_name": "e2f3", "organism": "Zebrafish", "refseq_name": "transcription factor E2F3", "refseq_ac": [ { "id": "NP_001074097", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001074097", "type": "external" } ], "gene_names_uniprotkb": "e2f3; wu:fc51d01; zgc:158604", "gene_names_refseq": "e2f3; wu:fc51d01; zgc:158604", "protein_names_uniprotkb": "Transcription factor E2F3", "protein_names_refseq": "transcription factor E2F3", "tax_id": 7955, "disease": "prostate cancer (Disease Ontology:DOID:10283); high grade glioma (Disease Ontology:DOID:3070); lung squamous cell carcinoma (Disease Ontology:DOID:3907); lung non-small cell carcinoma (Disease Ontology:DOID:3908); lung adenocarcinoma (Disease Ontology:DOID:3910)", "pathway": " (dre:791146); (R-DRE-68911); (R-DRE-69231)", "pathway_count": 3, "publication_count": 9, "publication_id_list": "20339547;23470996;25556858;26052340;26469318;33279959;34829928;38570112;38637503", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GDQH01013412.1, GDQQ01002107.1 [ECO:0000332] RNAseq introns :: partial sample support SAMEA3505372, SAMEA3505378 [ECO:0000350] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000019.1. On Jun 4, 2009 this sequence version replaced NP_001074097.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 5, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8N1YZZ8", "ec_number_list": [], "go_molecular_function": "GO:0046983 protein dimerization activity;GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding;GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific", "go_cellular_component": "GO:0090575 RNA polymerase II transcription regulator complex", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006357 regulation of transcription by RNA polymerase II", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "B8JLN4-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "B8JLP8-1", "uniprot_id": [ { "id": "B8JLP8_DANRE", "url": "https://www.uniprot.org/uniprot/B8JLP8", "type": "external" } ], "mass": 128458.0, "length": 1151, "protein_name": "Zinc finger SWIM domain-containing protein 5", "gene_name": "zswim5", "organism": "Zebrafish", "refseq_name": "zinc finger SWIM domain-containing protein 5", "refseq_ac": [ { "id": "NP_001138291", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001138291", "type": "external" } ], "gene_names_uniprotkb": "zswim5; fc05d01; sb:cb802; si:ch73-38p6.1; wu:fc05d01", "gene_names_refseq": "fc05d01; sb:cb802; si:ch73-38p6.1; wu:fc05d01; zswim5", "protein_names_uniprotkb": "Zinc finger SWIM domain-containing protein 5", "protein_names_refseq": "zinc finger SWIM domain-containing protein 5", "tax_id": 7955, "disease": "", "pathway": " (dre:100149522)", "pathway_count": 1, "publication_count": 3, "publication_id_list": "26469318;27189481;37161653", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GDQH01000681.1, GDQQ01004152.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000002.1. On or before Jan 25, 2009 this sequence version replaced XP_001920848.1, XP_001920889.1, XP_001920870.1., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NT01", "ec_number_list": [], "go_molecular_function": "GO:0008270 zinc ion binding", "go_cellular_component": "GO:0031462 Cul2-RING ubiquitin ligase complex", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "B8JLP8-1", "record_type": "protein", "filter_code": "0000000.0000101.010000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "B8JLQ0-1", "uniprot_id": [ { "id": "LYRM4_DANRE", "url": "https://www.uniprot.org/uniprot/B8JLQ0", "type": "external" } ], "mass": 10464.0, "length": 89, "protein_name": "LYR motif-containing protein 4", "gene_name": "lyrm4", "organism": "Zebrafish", "refseq_name": "LYR motif-containing protein 4", "refseq_ac": [ { "id": "NP_001157713", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001157713", "type": "external" } ], "gene_names_uniprotkb": "lyrm4; isd11; si:ch73-86n6.2", "gene_names_refseq": "lyrm4a; lyrm4; si:ch73-86n6.2", "protein_names_uniprotkb": "LYR motif-containing protein 4", "protein_names_refseq": "LYR motif-containing protein 4", "tax_id": 7955, "disease": "combined oxidative phosphorylation deficiency 19 (Disease Ontology:DOID:0111476)", "pathway": " (dre:100302660)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "23594743", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: EH538949.1, BC057512.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505380, SAMEA3505392 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from EH538949.1., [RefSeq]; Required for nuclear and mitochondrial iron-sulfur protein biosynthesis., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0005198 structural molecule activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005739 mitochondrion;GO:1990221 L-cysteine desulfurase complex", "go_biological_process": "GO:0016226 iron-sulfur cluster assembly", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "B8JLQ0-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "B8JLV7-1", "uniprot_id": [ { "id": "VMA21_DANRE", "url": "https://www.uniprot.org/uniprot/B8JLV7", "type": "external" } ], "mass": 11606.0, "length": 104, "protein_name": "Vacuolar ATPase assembly integral membrane protein vma21", "gene_name": "vma21", "organism": "Zebrafish", "refseq_name": "vacuolar ATPase assembly integral membrane protein vma21", "refseq_ac": [ { "id": "NP_001189353", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001189353", "type": "external" } ], "gene_names_uniprotkb": "vma21; si:ch73-26o5.1", "gene_names_refseq": "si:ch73-26o5.1; vma21", "protein_names_uniprotkb": "Vacuolar ATPase assembly integral membrane protein vma21", "protein_names_refseq": "VMA21 vacuolar H+-ATPase homolog; vacuolar ATPase assembly integral membrane protein vma21", "tax_id": 7955, "disease": "X-linked myopathy with excessive autophagy (Disease Ontology:DOID:0050760); follicular lymphoma (Disease Ontology:DOID:0050873)", "pathway": " (dre:100307085)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "23594743", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: CO932993.1, BC054675.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from EH439378.1, EH554817.1 and EH575927.1. On or before Jan 30, 2011 this sequence version replaced XP_002662039.1, XP_002662040.1., [RefSeq]; Required for the assembly of the V0 complex of the vacuolar ATPase (V-ATPase) in the endoplasmic reticulum., [UniProtKB, HAMAP]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 2, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005789 endoplasmic reticulum membrane;GO:0012507 ER to Golgi transport vesicle membrane;GO:0033116 endoplasmic reticulum-Golgi intermediate compartment membrane", "go_biological_process": "GO:0010506 regulation of autophagy;GO:0070072 vacuolar proton-transporting V-type ATPase complex assembly;GO:1905671 regulation of lysosome organization", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "B8JLV7-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "B8JM36-1", "uniprot_id": [ { "id": "B8JM36_DANRE", "url": "https://www.uniprot.org/uniprot/B8JM36", "type": "external" } ], "mass": 28870.0, "length": 254, "protein_name": "Large ribosomal subunit protein uL16m", "gene_name": "mrpl16", "organism": "Zebrafish", "refseq_name": "large ribosomal subunit protein uL16m", "refseq_ac": [ { "id": "NP_001007765", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001007765", "type": "external" } ], "gene_names_uniprotkb": "mrpl16; CH73-41E3.3; zgc:91951", "gene_names_refseq": "CH73-41E3.3; mrpl16; zgc:91951", "protein_names_uniprotkb": "Large ribosomal subunit protein uL16m; 39S ribosomal protein L16, mitochondrial", "protein_names_refseq": "large ribosomal subunit protein uL16m", "tax_id": 7955, "disease": "", "pathway": " (dre:493604); (R-DRE-5389840); (R-DRE-5419276); (R-DRE-9937383)", "pathway_count": 4, "publication_count": 3, "publication_id_list": "21575170;26469318;27189481", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC086509.1, DN833786.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## ##RefSeq-Attributes-START## gene product(s) localized to mito. :: inferred from homology ##RefSeq-Attributes-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000001.1. On or before Jun 25, 2024 this sequence version replaced XP_005168058.1, NP_001007765.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M2BFF8", "ec_number_list": [], "go_molecular_function": "GO:0019843 rRNA binding;GO:0003735 structural constituent of ribosome", "go_cellular_component": "GO:0005762 mitochondrial large ribosomal subunit;GO:0005743 mitochondrial inner membrane", "go_biological_process": "GO:0032543 mitochondrial translation", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "B8JM36-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "B8JM41-1", "uniprot_id": [ { "id": "B8JM41_DANRE", "url": "https://www.uniprot.org/uniprot/B8JM41", "type": "external" } ], "mass": 43930.0, "length": 394, "protein_name": "Golgin-45", "gene_name": "blzf1", "organism": "Zebrafish", "refseq_name": "golgin-45", "refseq_ac": [ { "id": "NP_001138275", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001138275", "type": "external" } ], "gene_names_uniprotkb": "blzf1; Golgin45; fe06a04; wu:fe06a04; zgc:66280; zgc:85871", "gene_names_refseq": "Golgin45; blzf1; fe06a04; wu:fe06a04; zgc:66280; zgc:85871", "protein_names_uniprotkb": "Golgin-45", "protein_names_refseq": "golgin-45", "tax_id": 7955, "disease": "hepatocellular carcinoma (Disease Ontology:DOID:684)", "pathway": " (dre:114452); (R-DRE-162658)", "pathway_count": 2, "publication_count": 7, "publication_id_list": "15520368;16109975;18335061;24683187;26469318;27189481;27824130", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GFIL01002354.1, BC070020.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505372 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000001.1. On or before Oct 1, 2011 this sequence version replaced NP_998171.2, XP_001331713.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NPT0;A0AC58JKB7;A0AC58JKE9", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0000139 Golgi membrane", "go_biological_process": "GO:0007160 cell-matrix adhesion;GO:0043001 Golgi to plasma membrane protein transport;GO:0007030 Golgi organization;GO:0060415 muscle tissue morphogenesis", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "B8JM41-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "B8JMA7-1", "uniprot_id": [ { "id": "B8JMA7_DANRE", "url": "https://www.uniprot.org/uniprot/B8JMA7", "type": "external" } ], "mass": 60745.0, "length": 534, "protein_name": "UDP-glucuronosyltransferase", "gene_name": "ugt2a4", "organism": "Zebrafish", "refseq_name": "UDP-glucuronosyltransferase 2A2 precursor", "refseq_ac": [ { "id": "NP_001018306", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001018306", "type": "external" } ], "gene_names_uniprotkb": "ugt2a4; si:dkey-204e18.2; ugt2a2; ugt2a3; zgc:112490; zgc:112491", "gene_names_refseq": "ugt2a2; zgc:112490; zgc:112491", "protein_names_uniprotkb": "UDP-glucuronosyltransferase; 2.4.1.17", "protein_names_refseq": "UDP-glucuronosyltransferase 2A2 precursor", "tax_id": 7955, "disease": "", "pathway": " (dre:100384900); (dre:553952); (dre:791613); (R-DRE-9753281); (R-DRE-9757110)", "pathway_count": 5, "publication_count": 9, "publication_id_list": "12408571;16882884;17475008;20161780;24728488;26469318;28843737;31942721;33872729", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC078212.1, SRR26395013.23443.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505378, SAMEA3505379 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000005.1. On or before Jul 17, 2010 this sequence version replaced NP_001170808.1, NP_001018306.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1N5N2", "ec_number_list": [ { "id": "2.4.1.17", "url": "https://www.rhea-db.org/rhea/?query=ec:2.4.1.17", "type": "external" } ], "go_molecular_function": "GO:0015020 glucuronosyltransferase activity", "go_cellular_component": "GO:0016020 membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "B8JMA7-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "B8JMZ3-1", "uniprot_id": [ { "id": "B8JMZ3_DANRE", "url": "https://www.uniprot.org/uniprot/B8JMZ3", "type": "external" } ], "mass": 11863.0, "length": 106, "protein_name": "Protein dpy-30 homolog", "gene_name": "dpy30", "organism": "Zebrafish", "refseq_name": "protein dpy-30 homolog", "refseq_ac": [ { "id": "NP_001002438", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001002438", "type": "external" } ], "gene_names_uniprotkb": "dpy30; zgc:92638", "gene_names_refseq": "dpy30; zgc:92638", "protein_names_uniprotkb": "Protein dpy-30 homolog; Dpy-30-like protein", "protein_names_refseq": "dpy-30 homolog; protein dpy-30 homolog", "tax_id": 7955, "disease": "", "pathway": " (dre:436711)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "25139354;25503746;26469318;27189481;30458291;32640983", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: EH555178.1, EH495541.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from EH555178.1 and EH539428.1. On Nov 18, 2009 this sequence version replaced NP_001002438.1. Transcript Variant: This variant (1) represents the shorter transcript and encodes the functional protein., [RefSeq]; The DPY30 subunit in SET1/MLL complexes regulates the proliferation and differentiation of hematopoietic progenitor cells., [RefSeq, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1N0D9", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0048188 Set1C/COMPASS complex", "go_biological_process": "GO:0035162 embryonic hemopoiesis;GO:0006351 DNA-templated transcription;GO:0006325 chromatin organization", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "B8JMZ3-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "D1YT98-1", "uniprot_id": [ { "id": "D1YT98_DANRE", "url": "https://www.uniprot.org/uniprot/D1YT98", "type": "external" } ], "mass": 68077.0, "length": 609, "protein_name": "T-box transcription factor TBX21", "gene_name": "tbx21", "organism": "Zebrafish", "refseq_name": "T-box transcription factor TBX21", "refseq_ac": [ { "id": "NP_001164070", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001164070", "type": "external" } ], "gene_names_uniprotkb": "tbx21; tbx21l", "gene_names_refseq": "tbx21l; tbx21", "protein_names_uniprotkb": "T-box transcription factor TBX21", "protein_names_refseq": "T-bet; T-box 21 like; T-box transcription factor TBX21", "tax_id": 7955, "disease": "immunodeficiency 88 (Disease Ontology:DOID:0061058); childhood-onset asthma (Disease Ontology:DOID:0080815); aspirin-induced respiratory disease (Disease Ontology:DOID:0080822); asthma, nasal polyps, and aspirin intolerance (Disease Ontology:DOID:0111579); malaria (Disease Ontology:DOID:12365); dilated cardiomyopathy (Disease Ontology:DOID:12930); uveitis (Disease Ontology:DOID:13141); orchitis (Disease Ontology:DOID:2518); asthma (Disease Ontology:DOID:2841); autoimmune thyroiditis (Disease Ontology:DOID:7188); periapical periodontitis (Disease Ontology:DOID:823); allergic asthma (Disease Ontology:DOID:9415)", "pathway": " (dre:797797)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "17624433;19036723;19961539;22547699;22915831;34888255;35072520;35772676;36059461;36133924", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: AM942762.2, AM942761.2 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505377, SAMEA3505382 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000012.1. On Apr 26, 2010 this sequence version replaced XP_001338262.2. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications., [RefSeq]; Correlation between the expression of t-bet, stat6 and foxp3 with other genes involved in Th and T(reg) responses, [RefSeq, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 12, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0A2R8PXE7;D2EBB7", "ec_number_list": [], "go_molecular_function": "GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding;GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific", "go_cellular_component": "GO:0005634 nucleus;GO:0000785 chromatin", "go_biological_process": "GO:0001708 cell fate specification;GO:0060429 epithelium development;GO:0006351 DNA-templated transcription;GO:0006357 regulation of transcription by RNA polymerase II;GO:0045893 positive regulation of DNA-templated transcription", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "D1YT98-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7EXE2-1", "uniprot_id": [ { "id": "E7EXE2_DANRE", "url": "https://www.uniprot.org/uniprot/E7EXE2", "type": "external" } ], "mass": 32153.0, "length": 289, "protein_name": "Calcium channel, voltage-dependent, gamma subunit 5a", "gene_name": "cacng5a", "organism": "Zebrafish", "refseq_name": "calcium channel, voltage-dependent, gamma subunit 5a", "refseq_ac": [ { "id": "NP_001313491", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001313491", "type": "external" } ], "gene_names_uniprotkb": "cacng5a", "gene_names_refseq": "cacng5a", "protein_names_uniprotkb": "Calcium channel, voltage-dependent, gamma subunit 5a", "protein_names_refseq": "calcium channel, voltage-dependent, gamma subunit 5a", "tax_id": 7955, "disease": "", "pathway": " (dre:797409)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "21951302", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: EH115247.1, SRR32588721.1586549.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505390, SAMEA4476730 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000006.1. On May 21, 2016 this sequence version replaced XP_005166293.1. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1P3H4", "ec_number_list": [], "go_molecular_function": "GO:0005245 voltage-gated calcium channel activity;GO:0016247 channel regulator activity", "go_cellular_component": "GO:0032281 AMPA glutamate receptor complex;GO:0098839 postsynaptic density membrane", "go_biological_process": "GO:0051968 positive regulation of synaptic transmission, glutamatergic;GO:0019226 transmission of nerve impulse;GO:0098970 postsynaptic neurotransmitter receptor diffusion trapping", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "E7EXE2-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7EXE6-1", "uniprot_id": [ { "id": "E7EXE6_DANRE", "url": "https://www.uniprot.org/uniprot/E7EXE6", "type": "external" } ], "mass": 60889.0, "length": 540, "protein_name": "Protein RFT1 homolog", "gene_name": "rft1", "organism": "Zebrafish", "refseq_name": "man(5)GlcNAc(2)-PP-dolichol translocation protein RFT1", "refseq_ac": [ { "id": "XP_688354", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_688354", "type": "external" } ], "gene_names_uniprotkb": "rft1", "gene_names_refseq": "rft1", "protein_names_uniprotkb": "Protein RFT1 homolog", "protein_names_refseq": "man(5)GlcNAc(2)-PP-dolichol translocation protein RFT1", "tax_id": 7955, "disease": "congenital disorder of glycosylation In (Disease Ontology:DOID:0080566)", "pathway": " (dre:559873)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133181) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 9, 2008 this sequence version replaced XP_688354.2. COMPLETENESS: full length., [RefSeq]; Intramembrane glycolipid transporter that operates in the biosynthetic pathway of dolichol-linked oligosaccharides, the glycan precursors employed in protein asparagine (N)-glycosylation. The sequential addition of sugars to dolichol pyrophosphate produces dolichol-linked oligosaccharides containing fourteen sugars, including two GlcNAcs, nine mannoses and three glucoses. Once assembled, the oligosaccharide is transferred from the lipid to nascent proteins by oligosaccharyltransferases. The assembly of dolichol-linked oligosaccharides begins on the cytosolic side of the endoplasmic reticulum membrane and finishes in its lumen. RFT1 could mediate the translocation of the cytosolically oriented intermediate DolPP-GlcNAc2Man5, produced by ALG11, into the ER lumen where dolichol-linked oligosaccharides assembly continues. However, the intramembrane lipid transporter activity could not be confirmed in vitro., [UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8N7TDL0", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005789 endoplasmic reticulum membrane", "go_biological_process": "GO:0006488 dolichol-linked oligosaccharide biosynthetic process;GO:0034203 glycolipid translocation", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7EXE6-1", "record_type": "protein", "filter_code": "0000000.0000011.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7EXE7-1", "uniprot_id": [ { "id": "E7EXE7_DANRE", "url": "https://www.uniprot.org/uniprot/E7EXE7", "type": "external" } ], "mass": 80394.0, "length": 780, "protein_name": "Uncharacterized protein zmp:0000000760", "gene_name": "zmp:0000000760", "organism": "Zebrafish", "refseq_name": "uncharacterized protein zmp:0000000760", "refseq_ac": [ { "id": "XP_002664125", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_002664125", "type": "external" } ], "gene_names_uniprotkb": "zmp:0000000760", "gene_names_refseq": "zmp:0000000760", "protein_names_uniprotkb": "Uncharacterized protein zmp:0000000760", "protein_names_refseq": "uncharacterized protein zmp:0000000760", "tax_id": 7955, "disease": "", "pathway": " (dre:100333762)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133188) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Aug 1, 2013 this sequence version replaced XP_002664125.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1RHK6", "ec_number_list": [], "go_molecular_function": "GO:0030020 extracellular matrix structural constituent conferring tensile strength", "go_cellular_component": "GO:0005576 extracellular region;GO:0005604 basement membrane", "go_biological_process": "GO:0030198 extracellular matrix organization", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7EXE7-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7EXH9-1", "uniprot_id": [ { "id": "E7EXH9_DANRE", "url": "https://www.uniprot.org/uniprot/E7EXH9", "type": "external" } ], "mass": 88873.0, "length": 791, "protein_name": "Chondroadherin-like protein", "gene_name": "chadla", "organism": "Zebrafish", "refseq_name": "chondroadherin-like protein", "refseq_ac": [ { "id": "XP_068075058", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_068075058", "type": "external" } ], "gene_names_uniprotkb": "chadla", "gene_names_refseq": "chadla", "protein_names_uniprotkb": "Chondroadherin-like protein", "protein_names_refseq": "chondroadherin-like protein", "tax_id": 7955, "disease": "", "pathway": " (dre:565474)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133178) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]; Potential negative modulator of chondrocyte differentiation. Inhibits collagen fibrillogenesis in vitro. May influence chondrocyte's differentiation by acting on its cellular collagenous microenvironment., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M6YXN0", "ec_number_list": [], "go_molecular_function": "GO:0004888 transmembrane signaling receptor activity;GO:0038023 signaling receptor activity", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "GO:0006954 inflammatory response;GO:0045087 innate immune response;GO:0002224 toll-like receptor signaling pathway", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7EXH9-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7EXJ6-1", "uniprot_id": [ { "id": "E7EXJ6_DANRE", "url": "https://www.uniprot.org/uniprot/E7EXJ6", "type": "external" } ], "mass": 194208.0, "length": 1732, "protein_name": "Nucleoporin NUP188", "gene_name": "nup188", "organism": "Zebrafish", "refseq_name": "nucleoporin NUP188", "refseq_ac": [ { "id": "XP_001923018", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_001923018", "type": "external" } ], "gene_names_uniprotkb": "nup188", "gene_names_refseq": "nup188", "protein_names_uniprotkb": "Nucleoporin NUP188", "protein_names_refseq": "nucleoporin NUP188", "tax_id": 7955, "disease": "Sandestig-Stefanova syndrome (Disease Ontology:DOID:0081272); respiratory failure (Disease Ontology:DOID:11162)", "pathway": " (dre:559225); (R-DRE-159227); (R-DRE-159231); (R-DRE-159236); (R-DRE-1855170); (R-DRE-1855196); (R-DRE-1855229); (R-DRE-191859); (R-DRE-3108214); (R-DRE-3232142); (R-DRE-3301854); (R-DRE-3371453); (R-DRE-4551638); (R-DRE-9615933)", "pathway_count": 14, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133196) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 2, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1QLP7", "ec_number_list": [], "go_molecular_function": "GO:0017056 structural constituent of nuclear pore", "go_cellular_component": "GO:0044611 nuclear pore inner ring", "go_biological_process": "GO:0051028 mRNA transport;GO:0006405 RNA export from nucleus;GO:0006606 protein import into nucleus", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7EXJ6-1", "record_type": "protein", "filter_code": "0000000.0000011.010000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7EXK7-1", "uniprot_id": [ { "id": "E7EXK7_DANRE", "url": "https://www.uniprot.org/uniprot/E7EXK7", "type": "external" } ], "mass": 133258.0, "length": 1214, "protein_name": "Otoancorin", "gene_name": "otoa", "organism": "Zebrafish", "refseq_name": "otoancorin", "refseq_ac": [ { "id": "XP_009290555", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009290555", "type": "external" } ], "gene_names_uniprotkb": "otoa", "gene_names_refseq": "otoa", "protein_names_uniprotkb": "Otoancorin", "protein_names_refseq": "otoancorin", "tax_id": 7955, "disease": "autosomal recessive nonsyndromic deafness 22 (Disease Ontology:DOID:0110480)", "pathway": " (dre:100007015)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133191) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M3AJ34;F1R3Q8", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0009986 cell surface;GO:0016020 membrane", "go_biological_process": "GO:0007160 cell-matrix adhesion", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7EXK7-1", "record_type": "protein", "filter_code": "0000000.0000011.010000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7EXL7-1", "uniprot_id": [ { "id": "E7EXL7_DANRE", "url": "https://www.uniprot.org/uniprot/E7EXL7", "type": "external" } ], "mass": 39079.0, "length": 353, "protein_name": "Beta-2 adrenergic receptor", "gene_name": "LOC101885642", "organism": "Zebrafish", "refseq_name": "beta-2 adrenergic receptor", "refseq_ac": [ { "id": "XP_005158304", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005158304", "type": "external" } ], "gene_names_uniprotkb": "LOC101885642", "gene_names_refseq": "LOC101885642", "protein_names_uniprotkb": "Beta-2 adrenergic receptor", "protein_names_refseq": "beta-2 adrenergic receptor", "tax_id": 7955, "disease": "", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133191) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M2B548;A0AC58HKT5;A0AC58HKY0;A0AC58HL00", "ec_number_list": [], "go_molecular_function": "GO:0004993 G protein-coupled serotonin receptor activity;GO:0030594 neurotransmitter receptor activity;GO:0051378 serotonin binding", "go_cellular_component": "GO:0005886 plasma membrane;GO:0030425 dendrite;GO:0045202 synapse", "go_biological_process": "GO:0007187 G protein-coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger;GO:0007268 chemical synaptic transmission;GO:0007198 adenylate cyclase-inhibiting serotonin receptor signaling pathway", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7EXL7-1", "record_type": "protein", "filter_code": "0000000.0000000.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7EXM3-1", "uniprot_id": [ { "id": "E7EXM3_DANRE", "url": "https://www.uniprot.org/uniprot/E7EXM3", "type": "external" } ], "mass": 72688.0, "length": 652, "protein_name": "Transporter", "gene_name": "si:ch211-117c9.5", "organism": "Zebrafish", "refseq_name": "sodium- and chloride-dependent creatine transporter 1 isoform X1", "refseq_ac": [ { "id": "XP_001922963", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_001922963", "type": "external" } ], "gene_names_uniprotkb": "si:ch211-117c9.5", "gene_names_refseq": "si:ch211-117c9.5", "protein_names_uniprotkb": "Transporter", "protein_names_refseq": "sodium- and chloride-dependent creatine transporter 1 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:100150452)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133198) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Aug 1, 2013 this sequence version replaced XP_001922963.3. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1QR72", "ec_number_list": [], "go_molecular_function": "GO:0005332 gamma-aminobutyric acid:sodium:chloride symporter activity;GO:0046872 metal ion binding", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "GO:0006865 amino acid transport;GO:0035725 sodium ion transmembrane transport", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7EXM3-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7EXM4-1", "uniprot_id": [ { "id": "E7EXM4_DANRE", "url": "https://www.uniprot.org/uniprot/E7EXM4", "type": "external" } ], "mass": 39700.0, "length": 340, "protein_name": "Carbohydrate sulfotransferase", "gene_name": "chst13", "organism": "Zebrafish", "refseq_name": "carbohydrate sulfotransferase 11 isoform X5", "refseq_ac": [ { "id": "XP_694030", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_694030", "type": "external" } ], "gene_names_uniprotkb": "chst13; si:ch211-236h17.3", "gene_names_refseq": "si:ch211-236h17.3", "protein_names_uniprotkb": "Carbohydrate sulfotransferase; 2.8.2.-", "protein_names_refseq": "carbohydrate sulfotransferase 11 isoform X5", "tax_id": 7955, "disease": "", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133198) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8N7UVE7", "ec_number_list": [], "go_molecular_function": "GO:0008146 sulfotransferase activity", "go_cellular_component": "GO:0000139 Golgi membrane", "go_biological_process": "GO:0016051 carbohydrate biosynthetic process;GO:0030166 proteoglycan biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7EXM4-1", "record_type": "protein", "filter_code": "0000000.0000000.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7EXM9-1", "uniprot_id": [ { "id": "E7EXM9_DANRE", "url": "https://www.uniprot.org/uniprot/E7EXM9", "type": "external" } ], "mass": 53080.0, "length": 502, "protein_name": "RNA-binding protein MEX3A", "gene_name": "mex3a", "organism": "Zebrafish", "refseq_name": "RNA-binding protein MEX3A", "refseq_ac": [ { "id": "XP_009290942", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009290942", "type": "external" } ], "gene_names_uniprotkb": "mex3a", "gene_names_refseq": "mex3a", "protein_names_uniprotkb": "RNA-binding protein MEX3A", "protein_names_refseq": "RNA-binding protein MEX3A", "tax_id": 7955, "disease": "", "pathway": " (dre:100332760)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133191) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M3ATU8", "ec_number_list": [], "go_molecular_function": "GO:0003723 RNA binding;GO:0008270 zinc ion binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7EXM9-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7EXS2-1", "uniprot_id": [ { "id": "E7EXS2_DANRE", "url": "https://www.uniprot.org/uniprot/E7EXS2", "type": "external" } ], "mass": 92840.0, "length": 835, "protein_name": "Serine/threonine-protein kinase TNNI3K", "gene_name": "tnni3k", "organism": "Zebrafish", "refseq_name": "serine/threonine-protein kinase TNNI3K", "refseq_ac": [ { "id": "NP_001191752", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001191752", "type": "external" } ], "gene_names_uniprotkb": "tnni3k; si:dkey-267j14.4", "gene_names_refseq": "si:dkey-267j14.4; tnni3k", "protein_names_uniprotkb": "Serine/threonine-protein kinase TNNI3K; 2.7.11.1; Cardiac ankyrin repeat kinase; TNNI3-interacting kinase", "protein_names_refseq": "serine/threonine-protein kinase TNNI3K", "tax_id": 7955, "disease": "", "pathway": "", "pathway_count": 0, "publication_count": 2, "publication_id_list": "27189481;33789631", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: SRR32588730.11390418.1, SRR32588733.707130.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000008.1. On Mar 11, 2011 this sequence version replaced XP_001339957.2. Sequence Note: This RefSeq record was created from genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record are predicted based on zebrafish transcript alignments and on full-length homologous protein alignment with human NP_057062.1., [RefSeq]; May play a role in cardiac physiology., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1P3P2;A0AC58G8F7", "ec_number_list": [ { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.7.11.13", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.13", "type": "external" }, { "id": "2.7.11.25", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.25", "type": "external" }, { "id": "2.7.10.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.1", "type": "external" }, { "id": "2.7.11.22", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.22", "type": "external" }, { "id": "2.7.11.21", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.21", "type": "external" }, { "id": "2.7.11.17", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.17", "type": "external" }, { "id": "2.7.12.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.1", "type": "external" }, { "id": "2.7.12.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.2", "type": "external" }, { "id": "2.7.11.24", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.24", "type": "external" }, { "id": "2.7.10.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.2", "type": "external" }, { "id": "2.7.11.23", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.23", "type": "external" }, { "id": "2.7.1.150", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.150", "type": "external" }, { "id": "2.7.11.12", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.12", "type": "external" }, { "id": "2.7.11.39", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.39", "type": "external" }, { "id": "2.7.11.11", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.11", "type": "external" }, { "id": "2.7.1.153", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.153", "type": "external" }, { "id": "2.7.1.137", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.137", "type": "external" }, { "id": "2.7.1.154", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.154", "type": "external" }, { "id": "2.7.11.26", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.26", "type": "external" }, { "id": "2.7.11.31", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.31", "type": "external" } ], "go_molecular_function": "GO:0004674 protein serine/threonine kinase activity;GO:0005524 ATP binding;GO:0046872 metal ion binding;GO:0016301 kinase activity;GO:0061629 RNA polymerase II-specific DNA-binding transcription factor binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm", "go_biological_process": "GO:0006357 regulation of transcription by RNA polymerase II;GO:1903779 regulation of cardiac conduction;GO:0002027 regulation of heart rate", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "E7EXS2-1", "record_type": "protein", "filter_code": "0000000.0000100.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7EXT6-1", "uniprot_id": [ { "id": "E7EXT6_DANRE", "url": "https://www.uniprot.org/uniprot/E7EXT6", "type": "external" } ], "mass": 55556.0, "length": 479, "protein_name": "non-specific serine/threonine protein kinase", "gene_name": "akt3b", "organism": "Zebrafish", "refseq_name": "RAC-gamma serine/threonine-protein kinase", "refseq_ac": [ { "id": "XP_001923454", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_001923454", "type": "external" } ], "gene_names_uniprotkb": "akt3b", "gene_names_refseq": "akt3b", "protein_names_uniprotkb": "non-specific serine/threonine protein kinase; 2.7.11.1", "protein_names_refseq": "RAC-gamma serine/threonine-protein kinase", "tax_id": 7955, "disease": "prostate cancer (Disease Ontology:DOID:10283); Parkinson's disease (Disease Ontology:DOID:14330); alcohol use disorder (Disease Ontology:DOID:1574); cancer (Disease Ontology:DOID:162); colon cancer (Disease Ontology:DOID:219); prostate adenocarcinoma (Disease Ontology:DOID:2526); carcinoma (Disease Ontology:DOID:305); glioblastoma (Disease Ontology:DOID:3068); malignant astrocytoma (Disease Ontology:DOID:3069); lung non-small cell carcinoma (Disease Ontology:DOID:3908); pancreatic adenocarcinoma (Disease Ontology:DOID:4074); renal cell carcinoma (Disease Ontology:DOID:4450); schizophrenia (Disease Ontology:DOID:5419); type 2 diabetes mellitus (Disease Ontology:DOID:9352)", "pathway": " (dre:100149794); (R-DRE-1257604); (R-DRE-1358803); (R-DRE-165159); (R-DRE-198323); (R-DRE-198693); (R-DRE-199418); (R-DRE-211163); (R-DRE-354192); (R-DRE-3769402); (R-DRE-389357); (R-DRE-392451); (R-DRE-450385); (R-DRE-450604); (R-DRE-5218920); (R-DRE-6804757); (R-DRE-6804758); (R-DRE-6804759); (R-DRE-6811558); (R-DRE-69202); (R-DRE-69656); (R-DRE-8849469); (R-DRE-8948751); (R-DRE-9604323); (R-DRE-9607240); (R-DRE-9614399); (R-DRE-9634638); (R-DRE-9755511); (R-DRE-9841251); (R-DRE-9856530); (R-DRE-9856649)", "pathway_count": 31, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133176) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Mar 23, 2011 this sequence version replaced XP_001923454.2. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 14, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1QR98", "ec_number_list": [ { "id": "3.1.3.16", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.16", "type": "external" }, { "id": "2.7.11.13", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.13", "type": "external" }, { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "3.4.22.62", "url": "https://www.rhea-db.org/rhea/?query=ec:3.4.22.62", "type": "external" }, { "id": "2.3.2.27", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.2.27", "type": "external" }, { "id": "2.7.11.10", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.10", "type": "external" } ], "go_molecular_function": "GO:0004674 protein serine/threonine kinase activity;GO:0005524 ATP binding", "go_cellular_component": "", "go_biological_process": "GO:0035556 intracellular signal transduction;GO:0043066 negative regulation of apoptotic process;GO:0008286 insulin receptor signaling pathway;GO:0043536 positive regulation of blood vessel endothelial cell migration;GO:0110057 regulation of blood vessel endothelial cell differentiation", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7EXT6-1", "record_type": "protein", "filter_code": "0000000.0000011.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7EXV0-1", "uniprot_id": [ { "id": "E7EXV0_DANRE", "url": "https://www.uniprot.org/uniprot/E7EXV0", "type": "external" } ], "mass": 24743.0, "length": 224, "protein_name": "ATP synthase subunit C lysine N-methyltransferase", "gene_name": "atpsckmt", "organism": "Zebrafish", "refseq_name": "uncharacterized protein LOC492519 isoform 1", "refseq_ac": [ { "id": "NP_001278635", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001278635", "type": "external" } ], "gene_names_uniprotkb": "atpsckmt; fam173b; zgc:103579", "gene_names_refseq": "atpsckmt; fam173b; zgc:103579", "protein_names_uniprotkb": "ATP synthase subunit C lysine N-methyltransferase; Protein N-lysine methyltransferase FAM173B", "protein_names_refseq": "family with sequence similarity 173, member B; uncharacterized protein LOC492519 isoform 1", "tax_id": 7955, "disease": "", "pathway": " (dre:492519)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "12477932;21873635", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: EH595983.1, EH608173.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505372 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000002.1, EH455280.1 and EH559135.1. On Apr 26, 2014 this sequence version replaced XP_005163486.1. Transcript Variant: This variant (1) represents the longer transcript and encodes the longer protein (isoform 1). Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1P0Q0", "ec_number_list": [], "go_molecular_function": "GO:0016279 protein-lysine N-methyltransferase activity", "go_cellular_component": "GO:0005739 mitochondrion;GO:0031966 mitochondrial membrane", "go_biological_process": "GO:0032259 methylation;GO:1904058 positive regulation of sensory perception of pain;GO:1905706 regulation of mitochondrial ATP synthesis coupled proton transport", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "E7EXV0-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7EXV8-1", "uniprot_id": [ { "id": "E7EXV8_DANRE", "url": "https://www.uniprot.org/uniprot/E7EXV8", "type": "external" } ], "mass": 58970.0, "length": 520, "protein_name": "Caspase-8", "gene_name": "casp10", "organism": "Zebrafish", "refseq_name": "caspase-8", "refseq_ac": [ { "id": "XP_685430", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_685430", "type": "external" } ], "gene_names_uniprotkb": "casp10", "gene_names_refseq": "casp10", "protein_names_uniprotkb": "Caspase-8", "protein_names_refseq": "caspase-8", "tax_id": 7955, "disease": "non-Hodgkin lymphoma (Disease Ontology:DOID:0060060); autoimmune lymphoproliferative syndrome type 2A (Disease Ontology:DOID:0110115); stomach cancer (Disease Ontology:DOID:10534)", "pathway": " (dre:557302); (R-DRE-111465); (R-DRE-264870); (R-DRE-3371378); (R-DRE-5218900); (R-DRE-5357905); (R-DRE-5675482); (R-DRE-69416); (R-DRE-75108); (R-DRE-75153); (R-DRE-75158); (R-DRE-9758274)", "pathway_count": 12, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133184) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Aug 1, 2013 this sequence version replaced XP_685430.3. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 3, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8N7TEL0", "ec_number_list": [], "go_molecular_function": "GO:0004197 cysteine-type endopeptidase activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0031265 CD95 death-inducing signaling complex", "go_biological_process": "GO:0006508 proteolysis;GO:0006915 apoptotic process;GO:0043525 positive regulation of neuron apoptotic process;GO:0051604 protein maturation", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7EXV8-1", "record_type": "protein", "filter_code": "0000000.0000011.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7EXW2-1", "uniprot_id": [ { "id": "E7EXW2_DANRE", "url": "https://www.uniprot.org/uniprot/E7EXW2", "type": "external" } ], "mass": 105440.0, "length": 932, "protein_name": "GPI ethanolamine phosphate transferase 1", "gene_name": "pign", "organism": "Zebrafish", "refseq_name": "GPI ethanolamine phosphate transferase 1", "refseq_ac": [ { "id": "NP_001297009", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001297009", "type": "external" } ], "gene_names_uniprotkb": "pign; zgc:172324", "gene_names_refseq": "pign; zgc:172324", "protein_names_uniprotkb": "GPI ethanolamine phosphate transferase 1; 2.-.-.-", "protein_names_refseq": "GPI ethanolamine phosphate transferase 1", "tax_id": 7955, "disease": "multiple congenital anomalies-hypotonia-seizures syndrome 1 (Disease Ontology:DOID:0080138); holoprosencephaly (Disease Ontology:DOID:4621)", "pathway": " (R-DRE-162710)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "26469318", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: SRR26395063.971381.1, SRR26395063.998399.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000024.1. On Jun 26, 2015 this sequence version replaced XP_005162759.1. Sequence Note: This RefSeq record was created from genomic sequence data because no single transcript was available for the full length of the gene. The extent of this transcript is supported by transcript alignments and orthologous data., [RefSeq]; Ethanolamine phosphate transferase involved in glycosylphosphatidylinositol-anchor biosynthesis. Transfers ethanolamine phosphate to the first alpha-1,4-linked mannose of the glycosylphosphatidylinositol precursor of GPI-anchor., [UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 2, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A0R4J8L6;A0A8M1P7W0;A0AC58IQK2;E7F4Q0", "ec_number_list": [ { "id": "2.-.-.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.-.-.-", "type": "external" } ], "go_molecular_function": "GO:0051377 mannose-ethanolamine phosphotransferase activity;GO:0016740 transferase activity", "go_cellular_component": "GO:0005789 endoplasmic reticulum membrane", "go_biological_process": "GO:0006506 GPI anchor biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "E7EXW2-1", "record_type": "protein", "filter_code": "0000000.0000111.010000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7EY13-1", "uniprot_id": [ { "id": "E7EY13_DANRE", "url": "https://www.uniprot.org/uniprot/E7EY13", "type": "external" } ], "mass": 65277.0, "length": 585, "protein_name": "Choline dehydrogenase", "gene_name": "chdh", "organism": "Zebrafish", "refseq_name": "choline dehydrogenase, mitochondrial", "refseq_ac": [ { "id": "XP_002663301", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_002663301", "type": "external" } ], "gene_names_uniprotkb": "chdh", "gene_names_refseq": "chdh", "protein_names_uniprotkb": "Choline dehydrogenase; 1.1.99.1", "protein_names_refseq": "choline dehydrogenase, mitochondrial", "tax_id": 7955, "disease": "", "pathway": " (dre:100331020); (R-DRE-6798163)", "pathway_count": 2, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133183) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Aug 1, 2013 this sequence version replaced XP_002663301.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1RM14", "ec_number_list": [ { "id": "1.1.99.1", "url": "https://www.rhea-db.org/rhea/?query=ec:1.1.99.1", "type": "external" } ], "go_molecular_function": "GO:0050660 flavin adenine dinucleotide binding;GO:0008812 choline dehydrogenase activity", "go_cellular_component": "GO:0005743 mitochondrial inner membrane", "go_biological_process": "GO:0019285 glycine betaine biosynthetic process from choline", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7EY13-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7EY30-1", "uniprot_id": [ { "id": "E7EY30_DANRE", "url": "https://www.uniprot.org/uniprot/E7EY30", "type": "external" } ], "mass": 72781.0, "length": 647, "protein_name": "Transporter", "gene_name": "slc6a19a.2", "organism": "Zebrafish", "refseq_name": "sodium-dependent neutral amino acid transporter B(0)AT1", "refseq_ac": [ { "id": "XP_002665492", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_002665492", "type": "external" } ], "gene_names_uniprotkb": "slc6a19a.2", "gene_names_refseq": "slc6a19a.2", "protein_names_uniprotkb": "Transporter", "protein_names_refseq": "sodium-dependent neutral amino acid transporter B(0)AT1", "tax_id": 7955, "disease": "Hartnup disease (Disease Ontology:DOID:1060)", "pathway": " (dre:100334171)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133194) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Mar 23, 2011 this sequence version replaced XP_002665492.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1RKV4", "ec_number_list": [], "go_molecular_function": "GO:0046872 metal ion binding;GO:0015175 neutral L-amino acid transmembrane transporter activity;GO:0015293 symporter activity", "go_cellular_component": "GO:0005886 plasma membrane;GO:0031526 brush border membrane", "go_biological_process": "GO:0015804 neutral amino acid transport;GO:0035725 sodium ion transmembrane transport", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7EY30-1", "record_type": "protein", "filter_code": "0000000.0000011.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7EY38-1", "uniprot_id": [ { "id": "E7EY38_DANRE", "url": "https://www.uniprot.org/uniprot/E7EY38", "type": "external" } ], "mass": 65889.0, "length": 588, "protein_name": "Vacuolar fusion protein MON1 homolog", "gene_name": "mon1bb", "organism": "Zebrafish", "refseq_name": "vacuolar fusion protein MON1 homolog B", "refseq_ac": [ { "id": "XP_021335518", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021335518", "type": "external" } ], "gene_names_uniprotkb": "mon1bb", "gene_names_refseq": "mon1bb", "protein_names_uniprotkb": "Vacuolar fusion protein MON1 homolog", "protein_names_refseq": "vacuolar fusion protein MON1 homolog B", "tax_id": 7955, "disease": "", "pathway": " (dre:325065); (R-DRE-8876198)", "pathway_count": 2, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133186) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]; Plays an important role in membrane trafficking through the secretory apparatus., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1QLJ6", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0035658 Mon1-Ccz1 complex", "go_biological_process": "GO:0016192 vesicle-mediated transport;GO:0006623 protein targeting to vacuole", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7EY38-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7EY40-1", "uniprot_id": [ { "id": "E7EY40_DANRE", "url": "https://www.uniprot.org/uniprot/E7EY40", "type": "external" } ], "mass": 76370.0, "length": 676, "protein_name": "Thrombospondin-type laminin G domain and EAR repeat-containing protein isoform X1", "gene_name": "tspeara", "organism": "Zebrafish", "refseq_name": "thrombospondin-type laminin G domain and EAR repeat-containing protein isoform X1", "refseq_ac": [ { "id": "XP_698991", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_698991", "type": "external" } ], "gene_names_uniprotkb": "tspeara", "gene_names_refseq": "tspeara", "protein_names_uniprotkb": "Thrombospondin-type laminin G domain and EAR repeat-containing protein isoform X1", "protein_names_refseq": "thrombospondin-type laminin G domain and EAR repeat-containing protein isoform X1", "tax_id": 7955, "disease": "tooth agenesis (Disease Ontology:DOID:0050591); autosomal recessive nonsyndromic deafness 98 (Disease Ontology:DOID:0110540); ectodermal dysplasia 14 (Disease Ontology:DOID:0111662)", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133181) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Feb 15, 2007 this sequence version replaced XP_698991.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 3, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8N7T858;A0AC58JTG2;A0AC58JTG7;A0AC58JTJ2", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0032420 stereocilium", "go_biological_process": "GO:0007165 signal transduction;GO:0060349 bone morphogenesis;GO:0042481 regulation of odontogenesis", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7EY40-1", "record_type": "protein", "filter_code": "0000000.0000010.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7EY47-1", "uniprot_id": [ { "id": "E7EY47_DANRE", "url": "https://www.uniprot.org/uniprot/E7EY47", "type": "external" } ], "mass": 107967.0, "length": 958, "protein_name": "Rho guanine nucleotide exchange factor 19", "gene_name": "arhgef19", "organism": "Zebrafish", "refseq_name": "rho guanine nucleotide exchange factor 19", "refseq_ac": [ { "id": "XP_005162265", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005162265", "type": "external" } ], "gene_names_uniprotkb": "arhgef19", "gene_names_refseq": "arhgef19", "protein_names_uniprotkb": "Rho guanine nucleotide exchange factor 19", "protein_names_refseq": "rho guanine nucleotide exchange factor 19", "tax_id": 7955, "disease": "", "pathway": " (dre:569202); (R-DRE-193648); (R-DRE-416482); (R-DRE-8980692); (R-DRE-9013148); (R-DRE-9013149)", "pathway_count": 6, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133198) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M2B9D6", "ec_number_list": [], "go_molecular_function": "GO:0005085 guanyl-nucleotide exchange factor activity", "go_cellular_component": "", "go_biological_process": "GO:0032956 regulation of actin cytoskeleton organization;GO:0008544 epidermis development;GO:0001843 neural tube closure;GO:0042060 wound healing", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7EY47-1", "record_type": "protein", "filter_code": "0000000.0000001.010000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7EY87-1", "uniprot_id": [ { "id": "E7EY87_DANRE", "url": "https://www.uniprot.org/uniprot/E7EY87", "type": "external" } ], "mass": 77629.0, "length": 693, "protein_name": "UV radiation resistance-associated gene protein isoform X1", "gene_name": "uvrag", "organism": "Zebrafish", "refseq_name": "UV radiation resistance-associated gene protein isoform X1", "refseq_ac": [ { "id": "XP_005172712", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005172712", "type": "external" } ], "gene_names_uniprotkb": "uvrag; Uvrag1; zgc:56164", "gene_names_refseq": "Uvrag1; uvrag; zgc:56164", "protein_names_uniprotkb": "UV radiation resistance-associated gene protein isoform X1", "protein_names_refseq": "UV radiation resistance-associated gene protein isoform X1", "tax_id": 7955, "disease": "", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133185) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M2BKF2", "ec_number_list": [], "go_molecular_function": "GO:0000149 SNARE binding", "go_cellular_component": "GO:0005768 endosome;GO:0032991 protein-containing complex;GO:0000323 lytic vacuole", "go_biological_process": "GO:0035493 SNARE complex assembly;GO:0030318 melanocyte differentiation", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7EY87-1", "record_type": "protein", "filter_code": "0000000.0000000.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7EYA0-1", "uniprot_id": [ { "id": "E7EYA0_DANRE", "url": "https://www.uniprot.org/uniprot/E7EYA0", "type": "external" } ], "mass": 70075.0, "length": 619, "protein_name": "Rho-related BTB domain-containing protein 3", "gene_name": "rhobtb3", "organism": "Zebrafish", "refseq_name": "rho-related BTB domain-containing protein 3", "refseq_ac": [ { "id": "XP_691270", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_691270", "type": "external" } ], "gene_names_uniprotkb": "rhobtb3", "gene_names_refseq": "rhobtb3", "protein_names_uniprotkb": "Rho-related BTB domain-containing protein 3", "protein_names_refseq": "rho-related BTB domain-containing protein 3", "tax_id": 7955, "disease": "", "pathway": " (dre:562804); (R-DRE-6811440); (R-DRE-9706019)", "pathway_count": 3, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133196) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Aug 1, 2013 this sequence version replaced XP_691270.5. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8N7TB76", "ec_number_list": [], "go_molecular_function": "GO:0031625 ubiquitin protein ligase binding", "go_cellular_component": "GO:0005737 cytoplasm", "go_biological_process": "GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process;GO:0030162 regulation of proteolysis", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7EYA0-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7EYE1-1", "uniprot_id": [ { "id": "E7EYE1_DANRE", "url": "https://www.uniprot.org/uniprot/E7EYE1", "type": "external" } ], "mass": 165880.0, "length": 1501, "protein_name": "Uncharacterized protein LOC334269", "gene_name": "myom2a", "organism": "Zebrafish", "refseq_name": "uncharacterized protein LOC334269", "refseq_ac": [ { "id": "NP_001333132", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001333132", "type": "external" } ], "gene_names_uniprotkb": "myom2a; fc08e02; fi38e05; si:dkey-78p20.4; wu:fc08e02; wu:fi38e05", "gene_names_refseq": "fc08e02; fi38e05; myom2a; si:dkey-78p20.4; wu:fc08e02; wu:fi38e05", "protein_names_uniprotkb": "Uncharacterized protein LOC334269", "protein_names_refseq": "uncharacterized protein LOC334269", "tax_id": 7955, "disease": "", "pathway": " (dre:334269)", "pathway_count": 1, "publication_count": 3, "publication_id_list": "26469318;27189481;36367103", "class_list": "", "function": "##Evidence-Data-START## RNAseq introns :: single sample supports all introns SAMN08196787, SAMN08196789 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000011.1. On Sep 30, 2016 this sequence version replaced XP_003199488.2. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]", "predicted_glycosites": 6, "predicted_n_glycosites": 0, "predicted_o_glycosites": 6, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 6, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1PAE0", "ec_number_list": [], "go_molecular_function": "GO:0008307 structural constituent of muscle", "go_cellular_component": "GO:0032982 myosin filament;GO:0031430 M band", "go_biological_process": "GO:0045214 sarcomere organization", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "E7EYE1-1", "record_type": "protein", "filter_code": "0000000.0000101.010000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7EYL0-1", "uniprot_id": [ { "id": "E7EYL0_DANRE", "url": "https://www.uniprot.org/uniprot/E7EYL0", "type": "external" } ], "mass": 31033.0, "length": 272, "protein_name": "Progestin and adipoQ receptor family member 4a", "gene_name": "paqr4a", "organism": "Zebrafish", "refseq_name": "progestin and adipoQ receptor family member 4a", "refseq_ac": [ { "id": "NP_001314992", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001314992", "type": "external" } ], "gene_names_uniprotkb": "paqr4a; paqr4; si:dkeyp-71f10.2", "gene_names_refseq": "paqr4a; paqr4; si:dkeyp-71f10.2", "protein_names_uniprotkb": "Progestin and adipoQ receptor family member 4a", "protein_names_refseq": "progestin and adipoQ receptor family member 4a", "tax_id": 7955, "disease": "", "pathway": " (dre:568196)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "26087843", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GFIL01024114.1, GDQH01018661.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA4476730, SAMEA4476754 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000003.1. On Jun 3, 2016 this sequence version replaced XP_693997.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M9PIK2", "ec_number_list": [], "go_molecular_function": "GO:0046872 metal ion binding", "go_cellular_component": "GO:0016020 membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "E7EYL0-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7EYM0-1", "uniprot_id": [ { "id": "E7EYM0_DANRE", "url": "https://www.uniprot.org/uniprot/E7EYM0", "type": "external" } ], "mass": 18773.0, "length": 167, "protein_name": "E3 ubiquitin-protein ligase RNF182", "gene_name": "si:ch73-335l21.4", "organism": "Zebrafish", "refseq_name": "E3 ubiquitin-protein ligase-like", "refseq_ac": [ { "id": "NP_001373656", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001373656", "type": "external" } ], "gene_names_uniprotkb": "si:ch73-335l21.4", "gene_names_refseq": "si:ch73-335l21.4", "protein_names_uniprotkb": "E3 ubiquitin-protein ligase RNF182; RING finger protein 182; RING-type E3 ubiquitin transferase RNF182", "protein_names_refseq": "E3 ubiquitin-protein ligase-like", "tax_id": 7955, "disease": "", "pathway": " (dre:100000332)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "26469318", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GDQH01021421.1, GDQQ01019529.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505385, SAMEA4476768 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000007.1. On Sep 2, 2020 this sequence version replaced XP_001922643.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1QKS7", "ec_number_list": [], "go_molecular_function": "GO:0008270 zinc ion binding", "go_cellular_component": "", "go_biological_process": "GO:0016567 protein ubiquitination", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "E7EYM0-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7EYS4-1", "uniprot_id": [ { "id": "E7EYS4_DANRE", "url": "https://www.uniprot.org/uniprot/E7EYS4", "type": "external" } ], "mass": 92653.0, "length": 831, "protein_name": "Uncharacterized protein dbf4b", "gene_name": "dbf4b", "organism": "Zebrafish", "refseq_name": "uncharacterized protein dbf4b", "refseq_ac": [ { "id": "XP_695130", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_695130", "type": "external" } ], "gene_names_uniprotkb": "dbf4b", "gene_names_refseq": "dbf4b", "protein_names_uniprotkb": "Uncharacterized protein dbf4b", "protein_names_refseq": "uncharacterized protein dbf4b", "tax_id": 7955, "disease": "", "pathway": " (dre:566753)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133187) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Aug 1, 2013 this sequence version replaced XP_695130.4. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8N7UTA7", "ec_number_list": [], "go_molecular_function": "GO:0008270 zinc ion binding;GO:0003676 nucleic acid binding;GO:0043539 protein serine/threonine kinase activator activity", "go_cellular_component": "GO:0031431 Dbf4-dependent protein kinase complex", "go_biological_process": "GO:1901987 regulation of cell cycle phase transition;GO:0010571 positive regulation of nuclear cell cycle DNA replication", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7EYS4-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7EYW7-1", "uniprot_id": [ { "id": "E7EYW7_DANRE", "url": "https://www.uniprot.org/uniprot/E7EYW7", "type": "external" } ], "mass": 57418.0, "length": 501, "protein_name": "SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2 isoform X1", "gene_name": "smarcd2", "organism": "Zebrafish", "refseq_name": "SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2 isoform X1", "refseq_ac": [ { "id": "XP_692749", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_692749", "type": "external" } ], "gene_names_uniprotkb": "smarcd2", "gene_names_refseq": "smarcd2", "protein_names_uniprotkb": "SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2 isoform X1", "protein_names_refseq": "SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (R-DRE-3214858); (R-DRE-8939243); (R-DRE-9933939); (R-DRE-9933946); (R-DRE-9933947)", "pathway_count": 5, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133187) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Feb 15, 2007 this sequence version replaced XP_692749.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8N7T7V7", "ec_number_list": [], "go_molecular_function": "GO:0003712 transcription coregulator activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005654 nucleoplasm;GO:0016514 SWI/SNF complex", "go_biological_process": "GO:0030223 neutrophil differentiation;GO:0006357 regulation of transcription by RNA polymerase II;GO:0002244 hematopoietic progenitor cell differentiation", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7EYW7-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7EYY9-1", "uniprot_id": [ { "id": "E7EYY9_DANRE", "url": "https://www.uniprot.org/uniprot/E7EYY9", "type": "external" } ], "mass": 50607.0, "length": 438, "protein_name": "Glycoprotein endo-alpha-1,2-mannosidase", "gene_name": "manea", "organism": "Zebrafish", "refseq_name": "glycoprotein endo-alpha-1,2-mannosidase", "refseq_ac": [ { "id": "NP_001004566", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001004566", "type": "external" } ], "gene_names_uniprotkb": "manea; fi29h09; wu:fi29h09; zgc:92825", "gene_names_refseq": "fi29h09; manea; wu:fi29h09; zgc:92825", "protein_names_uniprotkb": "Glycoprotein endo-alpha-1,2-mannosidase; 3.2.1.130", "protein_names_refseq": "glycoprotein endo-alpha-1,2-mannosidase", "tax_id": 7955, "disease": "anxiety disorder (Disease Ontology:DOID:2030); panic disorder (Disease Ontology:DOID:594); cocaine dependence (Disease Ontology:DOID:9975)", "pathway": " (dre:447827); (R-DRE-964739)", "pathway_count": 2, "publication_count": 2, "publication_id_list": "26469318;26992035", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: EH485176.1, EH497498.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from EH485176.1 and EH462633.1. On Sep 30, 2011 this sequence version replaced NP_001004566.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 3, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1N255", "ec_number_list": [ { "id": "3.2.1.130", "url": "https://www.rhea-db.org/rhea/?query=ec:3.2.1.130", "type": "external" } ], "go_molecular_function": "GO:0004559 alpha-mannosidase activity;GO:0004569 glycoprotein endo-alpha-1,2-mannosidase activity", "go_cellular_component": "GO:0000139 Golgi membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "E7EYY9-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7EYZ3-1", "uniprot_id": [ { "id": "E7EYZ3_DANRE", "url": "https://www.uniprot.org/uniprot/E7EYZ3", "type": "external" } ], "mass": 53388.0, "length": 464, "protein_name": "Opioid growth factor receptor", "gene_name": "ogfr", "organism": "Zebrafish", "refseq_name": "opioid growth factor receptor", "refseq_ac": [ { "id": "NP_001298278", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001298278", "type": "external" } ], "gene_names_uniprotkb": "ogfr; fb25b04; fj34c06; si:dkeyp-44b8.5; wu:fb25b04; wu:fj34c06", "gene_names_refseq": "fb25b04; fj34c06; ogfr; si:dkeyp-44b8.5; wu:fb25b04; wu:fj34c06", "protein_names_uniprotkb": "Opioid growth factor receptor", "protein_names_refseq": "ogfr2; opioid growth factor receptor", "tax_id": 7955, "disease": "", "pathway": " (dre:321658)", "pathway_count": 1, "publication_count": 3, "publication_id_list": "21354627;24683187;26469318", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GDQH01015800.1, SRR26395062.497534.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000023.1. On Aug 8, 2015 this sequence version replaced XP_003201204.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1P7K8", "ec_number_list": [], "go_molecular_function": "GO:0140625 opioid growth factor receptor activity", "go_cellular_component": "GO:0016020 membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "E7EYZ3-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7EZ94-1", "uniprot_id": [ { "id": "E7EZ94_DANRE", "url": "https://www.uniprot.org/uniprot/E7EZ94", "type": "external" } ], "mass": 27501.0, "length": 242, "protein_name": "glutathione transferase", "gene_name": "gstt1a", "organism": "Zebrafish", "refseq_name": "glutathione S-transferase theta-1a", "refseq_ac": [ { "id": "NP_001314691", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001314691", "type": "external" } ], "gene_names_uniprotkb": "gstt1a; cb870; gstt1", "gene_names_refseq": "cb870; gstt1a; gstt1", "protein_names_uniprotkb": "glutathione transferase; 2.5.1.18", "protein_names_refseq": "glutathione S-transferase theta 1; glutathione S-transferase theta-1a", "tax_id": 7955, "disease": "orofacial cleft (Disease Ontology:DOID:0050567); inflammatory bowel disease (Disease Ontology:DOID:0050589); alcohol dependence (Disease Ontology:DOID:0050741); diffuse large B-cell lymphoma (Disease Ontology:DOID:0050745); colorectal adenocarcinoma (Disease Ontology:DOID:0050861); medulloblastoma (Disease Ontology:DOID:0050902); myelodysplastic syndrome (Disease Ontology:DOID:0050908); pre-malignant neoplasm (Disease Ontology:DOID:0060071); acute promyelocytic leukemia (Disease Ontology:DOID:0060318); drug allergy (Disease Ontology:DOID:0060500); alcohol-associated liver disease (Disease Ontology:DOID:0070658); mucositis (Disease Ontology:DOID:0080178); colorectal carcinoma (Disease Ontology:DOID:0080199); COVID-19 (Disease Ontology:DOID:0080600); venous insufficiency (Disease Ontology:DOID:10128); osteonecrosis (Disease Ontology:DOID:10159); prostate cancer (Disease Ontology:DOID:10283); lymphoid leukemia (Disease Ontology:DOID:1037); Hirschsprung's disease (Disease Ontology:DOID:10487); stomach cancer (Disease Ontology:DOID:10534); Charcot-Marie-Tooth disease (Disease Ontology:DOID:10595); Alzheimer's disease (Disease Ontology:DOID:10652); primary open angle glaucoma (Disease Ontology:DOID:1070); hypertension (Disease Ontology:DOID:10763); Kuhnt-Junius degeneration (Disease Ontology:DOID:10873); hypospadias (Disease Ontology:DOID:10892); sickle cell anemia (Disease Ontology:DOID:10923); urinary bladder cancer (Disease Ontology:DOID:11054); bronchopulmonary dysplasia (Disease Ontology:DOID:11650); head and neck cancer (Disease Ontology:DOID:11934); optic neuritis (Disease Ontology:DOID:1210); beta thalassemia (Disease Ontology:DOID:12241); neutropenia (Disease Ontology:DOID:1227); aplastic anemia (Disease Ontology:DOID:12449); cardiovascular system disease (Disease Ontology:DOID:1287); lung cancer (Disease Ontology:DOID:1324); Fanconi anemia (Disease Ontology:DOID:13636); exfoliation syndrome (Disease Ontology:DOID:13641); Parkinson's disease (Disease Ontology:DOID:14330); aggressive periodontitis (Disease Ontology:DOID:1474); cystic fibrosis (Disease Ontology:DOID:1485); acute chest syndrome (Disease Ontology:DOID:1584); breast cancer (Disease Ontology:DOID:1612); cancer (Disease Ontology:DOID:162); congenital heart disease (Disease Ontology:DOID:1682); ovary epithelial cancer (Disease Ontology:DOID:2152); motor neuron disease (Disease Ontology:DOID:231); colon adenocarcinoma (Disease Ontology:DOID:234); anemia (Disease Ontology:DOID:2355); multiple sclerosis (Disease Ontology:DOID:2377); transitional cell carcinoma (Disease Ontology:DOID:2671); asthma (Disease Ontology:DOID:2841); cervix carcinoma (Disease Ontology:DOID:2893); pulmonary tuberculosis (Disease Ontology:DOID:2957); chronic obstructive pulmonary disease (Disease Ontology:DOID:3083); atopic dermatitis (Disease Ontology:DOID:3310); coronary artery disease (Disease Ontology:DOID:3393); esophagus squamous cell carcinoma (Disease Ontology:DOID:3748); Lynch syndrome (Disease Ontology:DOID:3883); pancreatic adenocarcinoma (Disease Ontology:DOID:4074); liver disease (Disease Ontology:DOID:409); cervical cancer (Disease Ontology:DOID:4362); renal cell carcinoma (Disease Ontology:DOID:4450); esophagus adenocarcinoma (Disease Ontology:DOID:4914); esophageal cancer (Disease Ontology:DOID:5041); liver cirrhosis (Disease Ontology:DOID:5082); peripheral nervous system disease (Disease Ontology:DOID:574); oral submucous fibrosis (Disease Ontology:DOID:5773); leukopenia (Disease Ontology:DOID:615); systemic juvenile rheumatoid arthritis (Disease Ontology:DOID:676); hepatocellular carcinoma (Disease Ontology:DOID:684); rheumatoid arthritis (Disease Ontology:DOID:7148); end stage renal disease (Disease Ontology:DOID:783); cataract (Disease Ontology:DOID:83); lung disease (Disease Ontology:DOID:850); Hodgkin's lymphoma (Disease Ontology:DOID:8567); infectious mononucleosis (Disease Ontology:DOID:8568); ulcerative colitis (Disease Ontology:DOID:8577); oral cavity cancer (Disease Ontology:DOID:8618); myeloid leukemia (Disease Ontology:DOID:8692); Crohn's disease (Disease Ontology:DOID:8778); skin melanoma (Disease Ontology:DOID:8923); diabetic retinopathy (Disease Ontology:DOID:8947); acute myeloid leukemia (Disease Ontology:DOID:9119); colorectal cancer (Disease Ontology:DOID:9256); diabetes mellitus (Disease Ontology:DOID:9351); type 2 diabetes mellitus (Disease Ontology:DOID:9352); multiple myeloma (Disease Ontology:DOID:9538); oral mucosa leukoplakia (Disease Ontology:DOID:9655); senile cataract (Disease Ontology:DOID:9669); type 1 diabetes mellitus (Disease Ontology:DOID:9744); acute lymphoblastic leukemia (Disease Ontology:DOID:9952); obesity (Disease Ontology:DOID:9970)", "pathway": " (dre:563972); (R-DRE-156590); (R-DRE-9753281)", "pathway_count": 3, "publication_count": 9, "publication_id_list": "18455246;23770340;24586676;24611545;25461745;29361160;31706034;32428239;38508476", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: EH488489.1, CN320207.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505376, SAMEA3505393 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from EH595099.1, EH485183.1 and EH606435.1. On May 25, 2016 this sequence version replaced XP_692427.1. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 93, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1P3N8", "ec_number_list": [ { "id": "2.5.1.18", "url": "https://www.rhea-db.org/rhea/?query=ec:2.5.1.18", "type": "external" }, { "id": "1.20.4.2", "url": "https://www.rhea-db.org/rhea/?query=ec:1.20.4.2", "type": "external" }, { "id": "1.8.5.1", "url": "https://www.rhea-db.org/rhea/?query=ec:1.8.5.1", "type": "external" }, { "id": "5.2.1.2", "url": "https://www.rhea-db.org/rhea/?query=ec:5.2.1.2", "type": "external" } ], "go_molecular_function": "GO:0004364 glutathione transferase activity", "go_cellular_component": "GO:0005737 cytoplasm", "go_biological_process": "GO:0006749 glutathione metabolic process", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "E7EZ94-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7EZG5-1", "uniprot_id": [ { "id": "E7EZG5_DANRE", "url": "https://www.uniprot.org/uniprot/E7EZG5", "type": "external" } ], "mass": 111866.0, "length": 1029, "protein_name": "Contactin-3", "gene_name": "cntn3b", "organism": "Zebrafish", "refseq_name": "contactin-3", "refseq_ac": [ { "id": "XP_684096", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_684096", "type": "external" } ], "gene_names_uniprotkb": "cntn3b", "gene_names_refseq": "cntn3b", "protein_names_uniprotkb": "Contactin-3", "protein_names_refseq": "contactin-3", "tax_id": 7955, "disease": "", "pathway": " (dre:556251)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133181) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Aug 1, 2013 this sequence version replaced XP_684096.5. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8N7UVL4", "ec_number_list": [], "go_molecular_function": "GO:0098632 cell-cell adhesion mediator activity", "go_cellular_component": "GO:0005886 plasma membrane;GO:0030424 axon;GO:0098552 side of membrane", "go_biological_process": "GO:0098609 cell-cell adhesion;GO:0007420 brain development;GO:0007411 axon guidance", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7EZG5-1", "record_type": "protein", "filter_code": "0000000.0000001.010000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7EZI3-1", "uniprot_id": [ { "id": "E7EZI3_DANRE", "url": "https://www.uniprot.org/uniprot/E7EZI3", "type": "external" } ], "mass": 146035.0, "length": 1310, "protein_name": "Contactin-associated protein-like 5 isoform X1", "gene_name": "cntnap5l", "organism": "Zebrafish", "refseq_name": "contactin-associated protein-like 5 isoform X1", "refseq_ac": [ { "id": "XP_001338473", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_001338473", "type": "external" } ], "gene_names_uniprotkb": "cntnap5l", "gene_names_refseq": "cntnap5l", "protein_names_uniprotkb": "Contactin-associated protein-like 5 isoform X1", "protein_names_refseq": "contactin-associated protein-like 5 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:798019)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133186) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Aug 1, 2013 this sequence version replaced XP_001338473.4. COMPLETENESS: full length., [RefSeq]; May play a role in the correct development and proper functioning of the peripheral and central nervous system and be involved in cell adhesion and intercellular communication., [UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1PUN3", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005886 plasma membrane;GO:0045202 synapse", "go_biological_process": "GO:0007165 signal transduction;GO:0007399 nervous system development", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7EZI3-1", "record_type": "protein", "filter_code": "0000000.0000001.010000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7EZJ4-1", "uniprot_id": [ { "id": "E7EZJ4_DANRE", "url": "https://www.uniprot.org/uniprot/E7EZJ4", "type": "external" } ], "mass": 37054.0, "length": 320, "protein_name": "Chemerin-like receptor 1", "gene_name": "si:dkey-42l23.7", "organism": "Zebrafish", "refseq_name": "chemerin-like receptor 1", "refseq_ac": [ { "id": "XP_017206711", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_017206711", "type": "external" } ], "gene_names_uniprotkb": "si:dkey-42l23.7", "gene_names_refseq": "si:dkey-42l23.7", "protein_names_uniprotkb": "Chemerin-like receptor 1", "protein_names_refseq": "chemerin-like receptor 1", "tax_id": 7955, "disease": "", "pathway": " (dre:100537110); (R-DRE-373076); (R-DRE-416476); (R-DRE-418594); (R-DRE-444473); (R-DRE-6798695)", "pathway_count": 6, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133190) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M6YSK1", "ec_number_list": [], "go_molecular_function": "GO:0004875 complement receptor activity;GO:0004930 G protein-coupled receptor activity", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "GO:0002430 complement receptor mediated signaling pathway;GO:0006954 inflammatory response;GO:0007204 positive regulation of cytosolic calcium ion concentration;GO:0007200 phospholipase C-activating G protein-coupled receptor signaling pathway", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7EZJ4-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7EZL6-1", "uniprot_id": [ { "id": "E7EZL6_DANRE", "url": "https://www.uniprot.org/uniprot/E7EZL6", "type": "external" } ], "mass": 70446.0, "length": 617, "protein_name": "Polypeptide N-acetylgalactosaminyltransferase", "gene_name": "galnt17", "organism": "Zebrafish", "refseq_name": "polypeptide N-acetylgalactosaminyltransferase 17 isoform X1", "refseq_ac": [ { "id": "XP_696189", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_696189", "type": "external" } ], "gene_names_uniprotkb": "galnt17", "gene_names_refseq": "galnt17", "protein_names_uniprotkb": "Polypeptide N-acetylgalactosaminyltransferase; 2.4.1.-; Protein-UDP acetylgalactosaminyltransferase", "protein_names_refseq": "polypeptide N-acetylgalactosaminyltransferase 17 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (R-DRE-913709)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133190) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Aug 1, 2013 this sequence version replaced XP_696189.4. COMPLETENESS: full length., [RefSeq]; May catalyze the initial reaction in O-linked oligosaccharide biosynthesis, the transfer of an N-acetyl-D-galactosamine residue to a serine or threonine residue on the protein receptor., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8N7UVJ2", "ec_number_list": [ { "id": "2.4.1.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.4.1.-", "type": "external" } ], "go_molecular_function": "GO:0046872 metal ion binding;GO:0030246 carbohydrate binding;GO:0004653 polypeptide N-acetylgalactosaminyltransferase activity", "go_cellular_component": "GO:0000139 Golgi membrane;GO:0005794 Golgi apparatus", "go_biological_process": "GO:0006493 protein O-linked glycosylation", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7EZL6-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7EZR6-1", "uniprot_id": [ { "id": "E7EZR6_DANRE", "url": "https://www.uniprot.org/uniprot/E7EZR6", "type": "external" } ], "mass": 42278.0, "length": 365, "protein_name": "Platelet-activating factor receptor", "gene_name": "ptafr", "organism": "Zebrafish", "refseq_name": "platelet-activating factor receptor", "refseq_ac": [ { "id": "XP_001342372", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_001342372", "type": "external" } ], "gene_names_uniprotkb": "ptafr", "gene_names_refseq": "ptafr", "protein_names_uniprotkb": "Platelet-activating factor receptor", "protein_names_refseq": "platelet-activating factor receptor", "tax_id": 7955, "disease": "pleurisy (Disease Ontology:DOID:10247); sciatic neuropathy (Disease Ontology:DOID:11446); neutropenia (Disease Ontology:DOID:1227); transient cerebral ischemia (Disease Ontology:DOID:224); glomerulonephritis (Disease Ontology:DOID:2921); acute kidney failure (Disease Ontology:DOID:3021); conjunctivitis (Disease Ontology:DOID:6195); perinatal necrotizing enterocolitis (Disease Ontology:DOID:8677)", "pathway": " (dre:100002627); (R-DRE-373076); (R-DRE-416476); (R-DRE-6798695)", "pathway_count": 4, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133192) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 8, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1PZK7", "ec_number_list": [], "go_molecular_function": "GO:0045028 G protein-coupled purinergic nucleotide receptor activity;GO:0004992 platelet activating factor receptor activity", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "GO:0006935 chemotaxis;GO:0007186 G protein-coupled receptor signaling pathway", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7EZR6-1", "record_type": "protein", "filter_code": "0000000.0000011.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7EZS5-1", "uniprot_id": [ { "id": "E7EZS5_DANRE", "url": "https://www.uniprot.org/uniprot/E7EZS5", "type": "external" } ], "mass": 51932.0, "length": 445, "protein_name": "Transcriptional adapter", "gene_name": "tada2a", "organism": "Zebrafish", "refseq_name": "transcriptional adapter 2-alpha isoform X1", "refseq_ac": [ { "id": "XP_005157493", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005157493", "type": "external" } ], "gene_names_uniprotkb": "tada2a; tada2l; zgc:154057", "gene_names_refseq": "tada2a; tada2l; zgc:154057", "protein_names_uniprotkb": "Transcriptional adapter", "protein_names_refseq": "transcriptional adapter 2-alpha isoform X1", "tax_id": 7955, "disease": "", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133190) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M2B3J9", "ec_number_list": [], "go_molecular_function": "GO:0003677 DNA binding;GO:0003682 chromatin binding;GO:0003713 transcription coactivator activity;GO:0008270 zinc ion binding", "go_cellular_component": "GO:0070461 SAGA-type complex;GO:0005634 nucleus;GO:0140672 ATAC complex", "go_biological_process": "GO:0006338 chromatin remodeling;GO:0006351 DNA-templated transcription;GO:0006357 regulation of transcription by RNA polymerase II;GO:0051726 regulation of cell cycle;GO:0051302 regulation of cell division", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7EZS5-1", "record_type": "protein", "filter_code": "0000000.0000000.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7EZV6-1", "uniprot_id": [ { "id": "E7EZV6_DANRE", "url": "https://www.uniprot.org/uniprot/E7EZV6", "type": "external" } ], "mass": 110908.0, "length": 997, "protein_name": "SUN domain-containing protein 1", "gene_name": "sun1b", "organism": "Zebrafish", "refseq_name": "SUN domain-containing protein 1", "refseq_ac": [ { "id": "NP_001018145", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001018145", "type": "external" } ], "gene_names_uniprotkb": "sun1b; im:7159577; sun1; zgc:92151", "gene_names_refseq": "im:7159577; sun1b; sun1; zgc:92151", "protein_names_uniprotkb": "SUN domain-containing protein 1", "protein_names_refseq": "SUN domain-containing protein 1; Sad1 and UNC84 domain containing 1", "tax_id": 7955, "disease": "", "pathway": " (dre:553188)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "26469318;31140357", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC095900.1, GFIL01040184.1 [ECO:0000332] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000003.1. On Jun 25, 2025 this sequence version replaced NP_001018145.2., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1N5L0", "ec_number_list": [], "go_molecular_function": "GO:0043495 protein-membrane adaptor activity", "go_cellular_component": "GO:0005635 nuclear envelope;GO:0005637 nuclear inner membrane;GO:0034993 meiotic nuclear membrane microtubule tethering complex", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "E7EZV6-1", "record_type": "protein", "filter_code": "0000000.0000101.010000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7EZW6-1", "uniprot_id": [ { "id": "E7EZW6_DANRE", "url": "https://www.uniprot.org/uniprot/E7EZW6", "type": "external" } ], "mass": 71163.0, "length": 650, "protein_name": "Signal recognition particle receptor subunit alpha", "gene_name": "srpra", "organism": "Zebrafish", "refseq_name": "signal recognition particle receptor subunit alpha", "refseq_ac": [ { "id": "XP_697518", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_697518", "type": "external" } ], "gene_names_uniprotkb": "srpra", "gene_names_refseq": "srpra", "protein_names_uniprotkb": "Signal recognition particle receptor subunit alpha", "protein_names_refseq": "signal recognition particle receptor subunit alpha", "tax_id": 7955, "disease": "", "pathway": " (dre:569063)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133193) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 9, 2008 this sequence version replaced XP_697518.2. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8N7UW26", "ec_number_list": [], "go_molecular_function": "GO:0005047 signal recognition particle binding;GO:0003924 GTPase activity;GO:0005525 GTP binding", "go_cellular_component": "GO:0005785 signal recognition particle receptor complex;GO:0005789 endoplasmic reticulum membrane", "go_biological_process": "GO:0030223 neutrophil differentiation;GO:0006886 intracellular protein transport;GO:0006614 SRP-dependent cotranslational protein targeting to membrane;GO:0045047 protein targeting to ER", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7EZW6-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F011-1", "uniprot_id": [ { "id": "E7F011_DANRE", "url": "https://www.uniprot.org/uniprot/E7F011", "type": "external" } ], "mass": 254814.0, "length": 2384, "protein_name": "Basic helix-loop-helix domain-containing protein USF3", "gene_name": "usf3", "organism": "Zebrafish", "refseq_name": "basic helix-loop-helix domain-containing protein USF3", "refseq_ac": [ { "id": "XP_005162790", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005162790", "type": "external" } ], "gene_names_uniprotkb": "usf3", "gene_names_refseq": "usf3", "protein_names_uniprotkb": "Basic helix-loop-helix domain-containing protein USF3", "protein_names_refseq": "basic helix-loop-helix domain-containing protein USF3", "tax_id": 7955, "disease": "", "pathway": " (dre:101884408)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133199) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 2, "predicted_n_glycosites": 0, "predicted_o_glycosites": 2, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 2, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M2B9X8", "ec_number_list": [], "go_molecular_function": "GO:0046983 protein dimerization activity;GO:0000977 RNA polymerase II transcription regulatory region sequence-specific DNA binding;GO:0001228 DNA-binding transcription activator activity, RNA polymerase II-specific", "go_cellular_component": "", "go_biological_process": "GO:0045944 positive regulation of transcription by RNA polymerase II;GO:0010719 negative regulation of epithelial to mesenchymal transition", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7F011-1", "record_type": "protein", "filter_code": "0000000.0000001.010000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F020-1", "uniprot_id": [ { "id": "E7F020_DANRE", "url": "https://www.uniprot.org/uniprot/E7F020", "type": "external" } ], "mass": 70228.0, "length": 627, "protein_name": "Fibroblast growth factor receptor substrate 2", "gene_name": "frs3", "organism": "Zebrafish", "refseq_name": "fibroblast growth factor receptor substrate 2", "refseq_ac": [ { "id": "XP_002662545", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_002662545", "type": "external" } ], "gene_names_uniprotkb": "frs3", "gene_names_refseq": "frs3", "protein_names_uniprotkb": "Fibroblast growth factor receptor substrate 2", "protein_names_refseq": "fibroblast growth factor receptor substrate 2", "tax_id": 7955, "disease": "", "pathway": " (dre:100330147); (R-DRE-5654693); (R-DRE-5654700); (R-DRE-5654706); (R-DRE-5654712); (R-DRE-5673001); (R-DRE-9696270); (R-DRE-9696273)", "pathway_count": 8, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133181) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Mar 23, 2011 this sequence version replaced XP_002662545.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1RDK1", "ec_number_list": [], "go_molecular_function": "GO:0005068 transmembrane receptor protein tyrosine kinase adaptor activity;GO:0005104 fibroblast growth factor receptor binding", "go_cellular_component": "GO:0016020 membrane", "go_biological_process": "GO:0008543 fibroblast growth factor receptor signaling pathway", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7F020-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F063-1", "uniprot_id": [ { "id": "E7F063_DANRE", "url": "https://www.uniprot.org/uniprot/E7F063", "type": "external" } ], "mass": 55610.0, "length": 480, "protein_name": "Tyrosine-protein kinase", "gene_name": "si:ch73-340m8.2", "organism": "Zebrafish", "refseq_name": "tyrosine-protein kinase Src42A", "refseq_ac": [ { "id": "XP_002665190", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_002665190", "type": "external" } ], "gene_names_uniprotkb": "si:ch73-340m8.2", "gene_names_refseq": "si:ch73-340m8.2", "protein_names_uniprotkb": "Tyrosine-protein kinase; 2.7.10.2", "protein_names_refseq": "tyrosine-protein kinase Src42A", "tax_id": 7955, "disease": "", "pathway": " (dre:100332982)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133192) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Aug 1, 2013 this sequence version replaced XP_002665190.2. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1RHT0", "ec_number_list": [ { "id": "2.7.10.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.1", "type": "external" }, { "id": "2.7.10.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.2", "type": "external" }, { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.7.12.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.1", "type": "external" }, { "id": "2.7.12.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.2", "type": "external" } ], "go_molecular_function": "GO:0004715 non-membrane spanning protein tyrosine kinase activity;GO:0005102 signaling receptor binding;GO:0005524 ATP binding", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "GO:0007169 cell surface receptor protein tyrosine kinase signaling pathway;GO:0030154 cell differentiation", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7F063-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F069-1", "uniprot_id": [ { "id": "E7F069_DANRE", "url": "https://www.uniprot.org/uniprot/E7F069", "type": "external" } ], "mass": 87881.0, "length": 792, "protein_name": "Nuclear factor of activated T-cells, cytoplasmic 2 isoform X1", "gene_name": "nfatc2b", "organism": "Zebrafish", "refseq_name": "nuclear factor of activated T-cells, cytoplasmic 2 isoform X1", "refseq_ac": [ { "id": "XP_700591", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_700591", "type": "external" } ], "gene_names_uniprotkb": "nfatc2b", "gene_names_refseq": "nfatc2b", "protein_names_uniprotkb": "Nuclear factor of activated T-cells, cytoplasmic 2 isoform X1", "protein_names_refseq": "nuclear factor of activated T-cells, cytoplasmic 2 isoform X1", "tax_id": 7955, "disease": "", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133181) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Aug 1, 2013 this sequence version replaced XP_700591.5. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8N7UVQ9", "ec_number_list": [], "go_molecular_function": "GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding;GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005667 transcription regulator complex", "go_biological_process": "GO:0060429 epithelium development;GO:0006351 DNA-templated transcription;GO:0007399 nervous system development;GO:0045944 positive regulation of transcription by RNA polymerase II;GO:0009653 anatomical structure morphogenesis", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7F069-1", "record_type": "protein", "filter_code": "0000000.0000000.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F078-1", "uniprot_id": [ { "id": "E7F078_DANRE", "url": "https://www.uniprot.org/uniprot/E7F078", "type": "external" } ], "mass": 91950.0, "length": 828, "protein_name": "Protein FAM171A2", "gene_name": "fam171a2a", "organism": "Zebrafish", "refseq_name": "protein FAM171A2", "refseq_ac": [ { "id": "XP_684281", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_684281", "type": "external" } ], "gene_names_uniprotkb": "fam171a2a", "gene_names_refseq": "fam171a2a", "protein_names_uniprotkb": "Protein FAM171A2", "protein_names_refseq": "protein FAM171A2", "tax_id": 7955, "disease": "", "pathway": " (dre:556398)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133178) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Feb 15, 2007 this sequence version replaced XP_684281.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8N7UQN9", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0016020 membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7F078-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F079-1", "uniprot_id": [ { "id": "E7F079_DANRE", "url": "https://www.uniprot.org/uniprot/E7F079", "type": "external" } ], "mass": 35299.0, "length": 318, "protein_name": "heme oxygenase (biliverdin-producing)", "gene_name": "hmox2b", "organism": "Zebrafish", "refseq_name": "heme oxygenase 2", "refseq_ac": [ { "id": "XP_002661145", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_002661145", "type": "external" } ], "gene_names_uniprotkb": "hmox2b", "gene_names_refseq": "hmox2b", "protein_names_uniprotkb": "heme oxygenase (biliverdin-producing); 1.14.14.18", "protein_names_refseq": "heme oxygenase 2", "tax_id": 7955, "disease": "", "pathway": " (dre:100329531); (R-DRE-189483); (R-DRE-6798695); (R-DRE-8980692); (R-DRE-917937); (R-DRE-9707564)", "pathway_count": 6, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133178) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M9PJ88;A0AC58J1B5;A0AC58J1B7;A0AC58J1B9;A0AC58J1C7", "ec_number_list": [ { "id": "2.7.11.13", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.13", "type": "external" }, { "id": "3.1.3.48", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.48", "type": "external" }, { "id": "3.4.24.81", "url": "https://www.rhea-db.org/rhea/?query=ec:3.4.24.81", "type": "external" }, { "id": "1.14.14.18", "url": "https://www.rhea-db.org/rhea/?query=ec:1.14.14.18", "type": "external" }, { "id": "3.1.4.4", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.4.4", "type": "external" }, { "id": "3.6.5.2", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.5.2", "type": "external" }, { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" } ], "go_molecular_function": "GO:0046872 metal ion binding;GO:0020037 heme binding;GO:0004392 heme oxygenase (decyclizing) activity", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "GO:0006979 response to oxidative stress;GO:0042167 heme catabolic process;GO:0006788 heme oxidation", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7F079-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F092-1", "uniprot_id": [ { "id": "E7F092_DANRE", "url": "https://www.uniprot.org/uniprot/E7F092", "type": "external" } ], "mass": 141825.0, "length": 1289, "protein_name": "Cyclin-dependent kinase 13", "gene_name": "cdk13", "organism": "Zebrafish", "refseq_name": "cyclin-dependent kinase 13", "refseq_ac": [ { "id": "NP_001353758", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001353758", "type": "external" } ], "gene_names_uniprotkb": "cdk13; cdc2l5; fi49c05; wu:fe16d10; wu:fi49c05", "gene_names_refseq": "cdc2l5; cdk13; fi49c05; wu:fe16d10; wu:fi49c05", "protein_names_uniprotkb": "Cyclin-dependent kinase 13", "protein_names_refseq": "cyclin-dependent kinase 13", "tax_id": 7955, "disease": "congenital heart defects, dysmorphic facial features, and intellectual developmental disorder (Disease Ontology:DOID:0112247); prostate cancer (Disease Ontology:DOID:10283); prostate carcinoma (Disease Ontology:DOID:10286); intellectual disability (Disease Ontology:DOID:1059); breast cancer (Disease Ontology:DOID:1612); hepatocellular carcinoma (Disease Ontology:DOID:684)", "pathway": " (dre:108178997); (R-DRE-6796648); (R-DRE-6798695)", "pathway_count": 3, "publication_count": 5, "publication_id_list": "16109975;26469318;27189481;28252024;37079685", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GDQH01011128.1, SRR26395015.1338022.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000024.1. On Oct 23, 2018 this sequence version replaced XP_687417.4. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 6, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8N7TAV3", "ec_number_list": [ { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.7.11.13", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.13", "type": "external" }, { "id": "2.7.11.25", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.25", "type": "external" }, { "id": "2.7.10.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.1", "type": "external" }, { "id": "2.7.11.22", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.22", "type": "external" }, { "id": "2.7.11.21", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.21", "type": "external" }, { "id": "2.7.11.17", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.17", "type": "external" }, { "id": "2.7.12.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.1", "type": "external" }, { "id": "2.7.12.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.2", "type": "external" }, { "id": "2.7.11.24", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.24", "type": "external" }, { "id": "2.7.10.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.2", "type": "external" }, { "id": "2.7.11.23", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.23", "type": "external" }, { "id": "2.7.1.150", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.150", "type": "external" }, { "id": "2.7.11.12", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.12", "type": "external" }, { "id": "2.7.11.39", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.39", "type": "external" }, { "id": "2.7.11.11", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.11", "type": "external" }, { "id": "2.7.1.153", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.153", "type": "external" }, { "id": "2.7.1.137", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.137", "type": "external" }, { "id": "2.7.1.154", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.154", "type": "external" }, { "id": "2.7.11.26", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.26", "type": "external" }, { "id": "2.7.11.31", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.31", "type": "external" } ], "go_molecular_function": "GO:0005524 ATP binding;GO:0004693 cyclin-dependent protein serine/threonine kinase activity;GO:0008353 RNA polymerase II CTD heptapeptide repeat kinase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0016607 nuclear speck;GO:0008024 cyclin/CDK positive transcription elongation factor complex", "go_biological_process": "GO:0032968 positive regulation of transcription elongation by RNA polymerase II", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "E7F092-1", "record_type": "protein", "filter_code": "0000000.0000111.010000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F099-1", "uniprot_id": [ { "id": "E7F099_DANRE", "url": "https://www.uniprot.org/uniprot/E7F099", "type": "external" } ], "mass": 43912.0, "length": 367, "protein_name": "RIB43A-like with coiled-coils protein 2", "gene_name": "ribc2", "organism": "Zebrafish", "refseq_name": "RIB43A-like with coiled-coils protein 2", "refseq_ac": [ { "id": "NP_001230078", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001230078", "type": "external" } ], "gene_names_uniprotkb": "ribc2; im:7139664; zgc:171573", "gene_names_refseq": "im:7139664; ribc2; zgc:171573", "protein_names_uniprotkb": "RIB43A-like with coiled-coils protein 2", "protein_names_refseq": "RIB43A-like with coiled-coils protein 2", "tax_id": 7955, "disease": "", "pathway": " (dre:568595)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "26469318", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GDQQ01013906.1, GFIL01046099.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505371, SAMEA3505374 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000025.1, EH436182.1 and CT732545.2. On Jul 30, 2011 this sequence version replaced XP_697024.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NYQ7", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "E7F099-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F0C3-1", "uniprot_id": [ { "id": "E7F0C3_DANRE", "url": "https://www.uniprot.org/uniprot/E7F0C3", "type": "external" } ], "mass": 24493.0, "length": 217, "protein_name": "GrpE protein homolog 2, mitochondrial", "gene_name": "grpel2", "organism": "Zebrafish", "refseq_name": "grpE protein homolog 2, mitochondrial", "refseq_ac": [ { "id": "NP_001275592", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001275592", "type": "external" } ], "gene_names_uniprotkb": "grpel2; si:dkey-25l11.3", "gene_names_refseq": "grpel2; si:dkey-25l11.3", "protein_names_uniprotkb": "GrpE protein homolog 2, mitochondrial", "protein_names_refseq": "grpE protein homolog 2, mitochondrial", "tax_id": 7955, "disease": "", "pathway": " (dre:100004941)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "21873635;26469318", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: CV482840.1, EH455145.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505372, SAMEA3505373 [ECO:0006172] ##Evidence-Data-END## ##RefSeq-Attributes-START## gene product(s) localized to mito. :: inferred from homology ##RefSeq-Attributes-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from EB871414.1, CT677933.2 and CT677934.2. On Dec 27, 2013 this sequence version replaced XP_001344119.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1P5R5", "ec_number_list": [], "go_molecular_function": "GO:0042803 protein homodimerization activity;GO:0051082 unfolded protein binding;GO:0051087 protein-folding chaperone binding;GO:0000774 adenyl-nucleotide exchange factor activity", "go_cellular_component": "GO:0001405 PAM complex, Tim23 associated import motor", "go_biological_process": "GO:0006457 protein folding;GO:0030150 protein import into mitochondrial matrix", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "E7F0C3-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F0C7-1", "uniprot_id": [ { "id": "E7F0C7_DANRE", "url": "https://www.uniprot.org/uniprot/E7F0C7", "type": "external" } ], "mass": 47812.0, "length": 431, "protein_name": "GDNF family receptor alpha-4", "gene_name": "gfra4b", "organism": "Zebrafish", "refseq_name": "GDNF family receptor alpha-4", "refseq_ac": [ { "id": "XP_694008", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_694008", "type": "external" } ], "gene_names_uniprotkb": "gfra4b", "gene_names_refseq": "gfra4b", "protein_names_uniprotkb": "GDNF family receptor alpha-4", "protein_names_refseq": "GDNF family receptor alpha-4", "tax_id": 7955, "disease": "", "pathway": " (dre:565651); (R-DRE-8853659)", "pathway_count": 2, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133189) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Aug 1, 2013 this sequence version replaced XP_694008.3. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 2, "predicted_n_glycosites": 0, "predicted_o_glycosites": 2, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 2, "binding_glycan_count": 0, "secondary_ac_list": "A0A8N7T6C6", "ec_number_list": [], "go_molecular_function": "GO:0038023 signaling receptor activity", "go_cellular_component": "GO:0043235 receptor complex;GO:0009897 external side of plasma membrane", "go_biological_process": "GO:0007169 cell surface receptor protein tyrosine kinase signaling pathway;GO:0007399 nervous system development", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7F0C7-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F0D0-1", "uniprot_id": [ { "id": "E7F0D0_DANRE", "url": "https://www.uniprot.org/uniprot/E7F0D0", "type": "external" } ], "mass": 21716.0, "length": 193, "protein_name": "Large ribosomal subunit protein mL62", "gene_name": "mrpl58", "organism": "Zebrafish", "refseq_name": "large ribosomal subunit protein mL62", "refseq_ac": [ { "id": "NP_001313644", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001313644", "type": "external" } ], "gene_names_uniprotkb": "mrpl58; ict1; si:ch1073-357b18.5", "gene_names_refseq": "ict1; mrpl58; si:ch1073-357b18.5", "protein_names_uniprotkb": "Large ribosomal subunit protein mL62; 3.1.1.29; Peptidyl-tRNA hydrolase ICT1, mitochondrial", "protein_names_refseq": "immature colon carcinoma transcript 1; large ribosomal subunit protein mL62", "tax_id": 7955, "disease": "", "pathway": " (dre:100149182); (R-DRE-5389840); (R-DRE-5419276); (R-DRE-9937383)", "pathway_count": 4, "publication_count": 3, "publication_id_list": "26469318;31097478;33757938", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: EH533953.1, EH534905.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505376 [ECO:0006172] ##Evidence-Data-END## ##RefSeq-Attributes-START## gene product(s) localized to mito. :: inferred from homology ##RefSeq-Attributes-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000012.1 and EH533953.1. On May 24, 2016 this sequence version replaced XP_001922710.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1P977", "ec_number_list": [ { "id": "3.6.5.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.5.-", "type": "external" }, { "id": "3.1.1.29", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.1.29", "type": "external" }, { "id": "3.6.5.3", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.5.3", "type": "external" }, { "id": "7.1.1.2", "url": "https://www.rhea-db.org/rhea/?query=ec:7.1.1.2", "type": "external" }, { "id": "7.1.1.9", "url": "https://www.rhea-db.org/rhea/?query=ec:7.1.1.9", "type": "external" } ], "go_molecular_function": "GO:0004045 peptidyl-tRNA hydrolase activity;GO:0016150 translation release factor activity, codon nonspecific", "go_cellular_component": "GO:0005762 mitochondrial large ribosomal subunit", "go_biological_process": "GO:0070126 mitochondrial translational termination", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "E7F0D0-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F0E8-1", "uniprot_id": [ { "id": "E7F0E8_DANRE", "url": "https://www.uniprot.org/uniprot/E7F0E8", "type": "external" } ], "mass": 123302.0, "length": 1071, "protein_name": "Exportin-1", "gene_name": "xpo1a", "organism": "Zebrafish", "refseq_name": "exportin-1", "refseq_ac": [ { "id": "XP_009292977", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009292977", "type": "external" } ], "gene_names_uniprotkb": "xpo1a", "gene_names_refseq": "xpo1a", "protein_names_uniprotkb": "Exportin-1; Chromosome region maintenance 1 protein homolog", "protein_names_refseq": "exportin-1", "tax_id": 7955, "disease": "colorectal carcinoma (Disease Ontology:DOID:0080199); stomach cancer (Disease Ontology:DOID:10534); pancreatic cancer (Disease Ontology:DOID:1793); gastric adenocarcinoma (Disease Ontology:DOID:3717); esophagus squamous cell carcinoma (Disease Ontology:DOID:3748); lung non-small cell carcinoma (Disease Ontology:DOID:3908); lung adenocarcinoma (Disease Ontology:DOID:3910); extrahepatic bile duct carcinoma (Disease Ontology:DOID:4682); stomach carcinoma (Disease Ontology:DOID:5517); hepatocellular carcinoma (Disease Ontology:DOID:684); colorectal cancer (Disease Ontology:DOID:9256)", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133176) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 11, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M3ALJ0;A0AC58FXK8", "ec_number_list": [], "go_molecular_function": "GO:0031267 small GTPase binding;GO:0005049 nuclear export signal receptor activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm", "go_biological_process": "GO:0000055 ribosomal large subunit export from nucleus;GO:0007420 brain development;GO:0006611 protein export from nucleus;GO:0051028 mRNA transport;GO:0000056 ribosomal small subunit export from nucleus", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7F0E8-1", "record_type": "protein", "filter_code": "0000000.0000010.010000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F0F7-1", "uniprot_id": [ { "id": "E7F0F7_DANRE", "url": "https://www.uniprot.org/uniprot/E7F0F7", "type": "external" } ], "mass": 50748.0, "length": 444, "protein_name": "Sestrin-3", "gene_name": "sesn4", "organism": "Zebrafish", "refseq_name": "sestrin-3", "refseq_ac": [ { "id": "XP_009289447", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009289447", "type": "external" } ], "gene_names_uniprotkb": "sesn4", "gene_names_refseq": "sesn4", "protein_names_uniprotkb": "Sestrin-3", "protein_names_refseq": "sestrin-3", "tax_id": 7955, "disease": "", "pathway": " (dre:100149048)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133189) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M3AGR6", "ec_number_list": [], "go_molecular_function": "GO:0016684 oxidoreductase activity, acting on peroxide as acceptor;GO:0070728 L-leucine binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm", "go_biological_process": "GO:0016239 positive regulation of macroautophagy;GO:1904262 negative regulation of TORC1 signaling;GO:1901031 regulation of response to reactive oxygen species;GO:1990253 cellular response to leucine starvation;GO:0071233 cellular response to L-leucine", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7F0F7-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F0I1-1", "uniprot_id": [ { "id": "E7F0I1_DANRE", "url": "https://www.uniprot.org/uniprot/E7F0I1", "type": "external" } ], "mass": 13568.0, "length": 120, "protein_name": "5-hydroxyisourate hydrolase", "gene_name": "urahb", "organism": "Zebrafish", "refseq_name": "5-hydroxyisourate hydrolase b", "refseq_ac": [ { "id": "NP_001186950", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001186950", "type": "external" } ], "gene_names_uniprotkb": "urahb", "gene_names_refseq": "urahb", "protein_names_uniprotkb": "5-hydroxyisourate hydrolase; 3.5.2.17; HIU hydrolase; HIUHase", "protein_names_refseq": "5-hydroxyisourate hydrolase b; 5-hydroxyisourate hydrolase-like", "tax_id": 7955, "disease": "hyperuricemia (Disease Ontology:DOID:1920)", "pathway": " (dre:570474)", "pathway_count": 1, "publication_count": 3, "publication_id_list": "27189481;33408126;35864190", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GFIL01024379.1, BC097189.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505390, SAMEA4476739 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000025.1 and EH433241.1. On Nov 22, 2014 this sequence version replaced NP_001186950.1. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments., [RefSeq]; Catalyzes the hydrolysis of 5-hydroxyisourate (HIU) to 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline (OHCU)., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NVN4", "ec_number_list": [ { "id": "3.5.2.17", "url": "https://www.rhea-db.org/rhea/?query=ec:3.5.2.17", "type": "external" } ], "go_molecular_function": "GO:0033971 hydroxyisourate hydrolase activity", "go_cellular_component": "GO:0005777 peroxisome", "go_biological_process": "GO:0006144 purine nucleobase metabolic process", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "E7F0I1-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F0J3-1", "uniprot_id": [ { "id": "E7F0J3_DANRE", "url": "https://www.uniprot.org/uniprot/E7F0J3", "type": "external" } ], "mass": 123286.0, "length": 1070, "protein_name": "TBC1 domain family member 31", "gene_name": "tbc1d31", "organism": "Zebrafish", "refseq_name": "TBC1 domain family member 31", "refseq_ac": [ { "id": "XP_695006", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_695006", "type": "external" } ], "gene_names_uniprotkb": "tbc1d31", "gene_names_refseq": "tbc1d31", "protein_names_uniprotkb": "TBC1 domain family member 31", "protein_names_refseq": "TBC1 domain family member 31", "tax_id": 7955, "disease": "", "pathway": " (dre:563134)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133191) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]; Molecular adapter which is involved in cilium biogenesis. Part of a functional complex including OFD1 a centriolar protein involved in cilium assembly. Could regulate the cAMP-dependent phosphorylation of OFD1, and its subsequent ubiquitination by PJA2 which ultimately leads to its proteasomal degradation., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8N7T6G9", "ec_number_list": [], "go_molecular_function": "GO:0060090 molecular adaptor activity", "go_cellular_component": "GO:0034451 centriolar satellite;GO:0036064 ciliary basal body", "go_biological_process": "GO:0060271 cilium assembly", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7F0J3-1", "record_type": "protein", "filter_code": "0000000.0000001.010000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F0K3-1", "uniprot_id": [ { "id": "E7F0K3_DANRE", "url": "https://www.uniprot.org/uniprot/E7F0K3", "type": "external" } ], "mass": 46725.0, "length": 415, "protein_name": "Caveolae-associated protein 1", "gene_name": "cavin1a", "organism": "Zebrafish", "refseq_name": "caveolae-associated protein 1", "refseq_ac": [ { "id": "XP_001920702", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_001920702", "type": "external" } ], "gene_names_uniprotkb": "cavin1a", "gene_names_refseq": "cavin1a", "protein_names_uniprotkb": "Caveolae-associated protein 1", "protein_names_refseq": "caveolae-associated protein 1", "tax_id": 7955, "disease": "congenital generalized lipodystrophy type 4 (Disease Ontology:DOID:0111138); pulmonary hypertension (Disease Ontology:DOID:6432)", "pathway": " (dre:557070)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133178) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 2, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1QL95", "ec_number_list": [], "go_molecular_function": "GO:0008307 structural constituent of muscle;GO:0042134 rRNA primary transcript binding", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005901 caveola", "go_biological_process": "GO:0006361 transcription initiation at RNA polymerase I promoter;GO:0006363 termination of RNA polymerase I transcription", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7F0K3-1", "record_type": "protein", "filter_code": "0000000.0000011.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F0L6-1", "uniprot_id": [ { "id": "E7F0L6_DANRE", "url": "https://www.uniprot.org/uniprot/E7F0L6", "type": "external" } ], "mass": 10590.0, "length": 95, "protein_name": "Peptide YYb precursor", "gene_name": "pyyb", "organism": "Zebrafish", "refseq_name": "peptide YYb precursor", "refseq_ac": [ { "id": "NP_001314824", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001314824", "type": "external" } ], "gene_names_uniprotkb": "pyyb; si:ch211-250b22.5", "gene_names_refseq": "pyyb; si:ch211-250b22.5", "protein_names_uniprotkb": "Peptide YYb precursor", "protein_names_refseq": "peptide YYb precursor", "tax_id": 7955, "disease": "", "pathway": " (dre:793458); (R-DRE-375276); (R-DRE-418594)", "pathway_count": 3, "publication_count": 10, "publication_id_list": "15891094;16359756;17950734;23352790;23508731;35088828;35286299;36291156;36318514;38732518", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BF717422.1, SRR32588726.51086181.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505380 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000012.1. On May 27, 2016 this sequence version replaced XP_001333222.2. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1P3Y0", "ec_number_list": [], "go_molecular_function": "GO:0005184 neuropeptide hormone activity;GO:0031841 neuropeptide Y receptor binding;GO:0031843 type 2 neuropeptide Y receptor binding;GO:0031844 type 4 neuropeptide Y receptor binding", "go_cellular_component": "GO:0005615 extracellular space", "go_biological_process": "GO:0007218 neuropeptide signaling pathway;GO:0007631 feeding behavior", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "E7F0L6-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F0M3-1", "uniprot_id": [ { "id": "E7F0M3_DANRE", "url": "https://www.uniprot.org/uniprot/E7F0M3", "type": "external" } ], "mass": 64310.0, "length": 567, "protein_name": "Atypical kinase COQ8A, mitochondrial", "gene_name": "coq8ab", "organism": "Zebrafish", "refseq_name": "atypical kinase COQ8A, mitochondrial-like isoform X1", "refseq_ac": [ { "id": "XP_021328728", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021328728", "type": "external" } ], "gene_names_uniprotkb": "coq8ab", "gene_names_refseq": "coq8ab", "protein_names_uniprotkb": "Atypical kinase COQ8A, mitochondrial; Chaperone activity of bc1 complex-like; Coenzyme Q protein 8A; aarF domain-containing protein kinase 3", "protein_names_refseq": "atypical kinase COQ8A, mitochondrial-like isoform X1", "tax_id": 7955, "disease": "coenzyme Q10 deficiency disease (Disease Ontology:DOID:0050730); primary coenzyme Q10 deficiency 4 (Disease Ontology:DOID:0070241); nephrotic syndrome type 9 (Disease Ontology:DOID:0080391); nephrotic syndrome (Disease Ontology:DOID:1184)", "pathway": " (dre:327332)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133192) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]; Atypical kinase involved in the biosynthesis of coenzyme Q, also named ubiquinone, an essential lipid-soluble electron transporter for aerobic cellular respiration. Its substrate specificity is still unclear: may act as a protein kinase that mediates phosphorylation of COQ3. According to other reports, acts as a small molecule kinase, possibly a lipid kinase that phosphorylates a prenyl lipid in the ubiquinone biosynthesis pathway, as suggested by its ability to bind coenzyme Q lipid intermediates. However, the small molecule kinase activity was not confirmed by another publication. Shows an unusual selectivity for binding ADP over ATP., [UniProtKB, UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 4, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M9PNV3", "ec_number_list": [], "go_molecular_function": "GO:0005524 ATP binding;GO:0016301 kinase activity", "go_cellular_component": "GO:0031966 mitochondrial membrane", "go_biological_process": "GO:0006744 ubiquinone biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7F0M3-1", "record_type": "protein", "filter_code": "0000000.0000011.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F0T8-1", "uniprot_id": [ { "id": "E7F0T8_DANRE", "url": "https://www.uniprot.org/uniprot/E7F0T8", "type": "external" } ], "mass": 50511.0, "length": 450, "protein_name": "Uncharacterized protein si:ch211-11k18.4", "gene_name": "si:ch211-11k18.4", "organism": "Zebrafish", "refseq_name": "uncharacterized protein si:ch211-11k18.4", "refseq_ac": [ { "id": "XP_707984", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_707984", "type": "external" } ], "gene_names_uniprotkb": "si:ch211-11k18.4", "gene_names_refseq": "si:ch211-11k18.4", "protein_names_uniprotkb": "Uncharacterized protein si:ch211-11k18.4", "protein_names_refseq": "uncharacterized protein si:ch211-11k18.4", "tax_id": 7955, "disease": "", "pathway": " (dre:559333)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133178) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8N7TFN5", "ec_number_list": [], "go_molecular_function": "GO:0003924 GTPase activity;GO:0005525 GTP binding;GO:0030674 protein-macromolecule adaptor activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005886 plasma membrane", "go_biological_process": "GO:0006897 endocytosis;GO:0016197 endosomal transport;GO:0007005 mitochondrion organization", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7F0T8-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F0U9-1", "uniprot_id": [ { "id": "E7F0U9_DANRE", "url": "https://www.uniprot.org/uniprot/E7F0U9", "type": "external" } ], "mass": 15715.0, "length": 135, "protein_name": "Active regulator of SIRT1", "gene_name": "rps19bp1", "organism": "Zebrafish", "refseq_name": "active regulator of SIRT1", "refseq_ac": [ { "id": "NP_001373331", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001373331", "type": "external" } ], "gene_names_uniprotkb": "rps19bp1", "gene_names_refseq": "rps19bp1", "protein_names_uniprotkb": "Active regulator of SIRT1; 40S ribosomal protein S19-binding protein 1", "protein_names_refseq": "active regulator of SIRT1", "tax_id": 7955, "disease": "", "pathway": " (dre:100005069); (R-DRE-3371453)", "pathway_count": 2, "publication_count": 2, "publication_id_list": "26469318;27189481", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: CV115546.1, BC090266.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA4476763 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000006.1. On Aug 21, 2020 this sequence version replaced XP_005172114.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M2BJX0", "ec_number_list": [], "go_molecular_function": "GO:0019899 enzyme binding", "go_cellular_component": "GO:0005730 nucleolus;GO:0005840 ribosome", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "E7F0U9-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F0X8-1", "uniprot_id": [ { "id": "E7F0X8_DANRE", "url": "https://www.uniprot.org/uniprot/E7F0X8", "type": "external" } ], "mass": 401092.0, "length": 3594, "protein_name": "Uncharacterized protein stard9", "gene_name": "stard9", "organism": "Zebrafish", "refseq_name": "uncharacterized protein stard9", "refseq_ac": [ { "id": "XP_001921905", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_001921905", "type": "external" } ], "gene_names_uniprotkb": "stard9", "gene_names_refseq": "stard9", "protein_names_uniprotkb": "Uncharacterized protein stard9", "protein_names_refseq": "uncharacterized protein stard9", "tax_id": 7955, "disease": "", "pathway": " (dre:100149555)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133192) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Aug 1, 2013 this sequence version replaced XP_001921905.3. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 2, "predicted_n_glycosites": 0, "predicted_o_glycosites": 2, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 2, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1QHM6", "ec_number_list": [], "go_molecular_function": "GO:0005524 ATP binding;GO:0008017 microtubule binding;GO:0016887 ATP hydrolysis activity;GO:0008289 lipid binding;GO:0008574 plus-end-directed microtubule motor activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005874 microtubule;GO:0005871 kinesin complex", "go_biological_process": "GO:0048731 system development;GO:0047496 vesicle transport along microtubule", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7F0X8-1", "record_type": "protein", "filter_code": "0000000.0000001.001000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F144-1", "uniprot_id": [ { "id": "E7F144_DANRE", "url": "https://www.uniprot.org/uniprot/E7F144", "type": "external" } ], "mass": 20639.0, "length": 183, "protein_name": "small monomeric GTPase", "gene_name": "rap2aa", "organism": "Zebrafish", "refseq_name": "ras-related protein Rap-2a isoform X1", "refseq_ac": [ { "id": "XP_003199211", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003199211", "type": "external" } ], "gene_names_uniprotkb": "rap2aa", "gene_names_refseq": "rap2aa", "protein_names_uniprotkb": "small monomeric GTPase; 3.6.5.2", "protein_names_refseq": "ras-related protein Rap-2a isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:100332969)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133184) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1RM63", "ec_number_list": [ { "id": "3.6.5.2", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.5.2", "type": "external" }, { "id": "3.6.5.3", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.5.3", "type": "external" }, { "id": "3.6.5.5", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.5.5", "type": "external" }, { "id": "3.6.1.5", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.1.5", "type": "external" }, { "id": "3.6.5.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.5.-", "type": "external" }, { "id": "3.6.1.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.1.-", "type": "external" }, { "id": "3.6.5.4", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.5.4", "type": "external" } ], "go_molecular_function": "GO:0003924 GTPase activity;GO:0005525 GTP binding;GO:0003925 G protein activity", "go_cellular_component": "GO:0005886 plasma membrane;GO:0055038 recycling endosome membrane", "go_biological_process": "GO:0032486 Rap protein signal transduction;GO:0030336 negative regulation of cell migration", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7F144-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F146-1", "uniprot_id": [ { "id": "E7F146_DANRE", "url": "https://www.uniprot.org/uniprot/E7F146", "type": "external" } ], "mass": 29460.0, "length": 264, "protein_name": "Uncharacterized protein LOC100002840 precursor", "gene_name": "zmp:0000001006", "organism": "Zebrafish", "refseq_name": "uncharacterized protein LOC100002840 precursor", "refseq_ac": [ { "id": "NP_001315018", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001315018", "type": "external" } ], "gene_names_uniprotkb": "zmp:0000001006; WB_01; WB_02; WB_03; WB_05", "gene_names_refseq": "WB_01; WB_02; WB_03; WB_05; zmp:0000001006", "protein_names_uniprotkb": "Uncharacterized protein LOC100002840 precursor", "protein_names_refseq": "major histocompatibility complex, class II beta chain, WB_01; major histocompatibility complex, class II beta chain, WB_02; major histocompatibility complex, class II beta chain, WB_03; major histocompatibility complex, class II beta chain, WB_05; uncharacterized protein LOC100002840 precursor", "tax_id": 7955, "disease": "", "pathway": " (dre:100002840); (R-DRE-2132295)", "pathway_count": 2, "publication_count": 2, "publication_id_list": "26469318;34903649", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: EH475059.1, LC198648.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA708836, SAMN01765705 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000013.1, EH449228.1 and EH475059.1. On Jun 4, 2016 this sequence version replaced XP_001342524.2., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1P4D0", "ec_number_list": [], "go_molecular_function": "GO:0023026 MHC class II protein complex binding;GO:0042605 peptide antigen binding", "go_cellular_component": "GO:0005765 lysosomal membrane;GO:0031902 late endosome membrane;GO:0042613 MHC class II protein complex", "go_biological_process": "GO:0019886 antigen processing and presentation of exogenous peptide antigen via MHC class II;GO:0002503 peptide antigen assembly with MHC class II protein complex;GO:0050870 positive regulation of T cell activation;GO:0050778 positive regulation of immune response", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "E7F146-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F147-1", "uniprot_id": [ { "id": "E7F147_DANRE", "url": "https://www.uniprot.org/uniprot/E7F147", "type": "external" } ], "mass": 14008.0, "length": 125, "protein_name": "Plac8 onzin related protein 1", "gene_name": "ponzr1", "organism": "Zebrafish", "refseq_name": "plac8 onzin related protein 1", "refseq_ac": [ { "id": "NP_001314677", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001314677", "type": "external" } ], "gene_names_uniprotkb": "ponzr1; gb:eh433777; si:dkey-33c9.4", "gene_names_refseq": "gb:eh433777; ponzr1; si:dkey-33c9.4", "protein_names_uniprotkb": "Plac8 onzin related protein 1", "protein_names_refseq": "plac8 onzin related protein 1", "tax_id": 7955, "disease": "", "pathway": " (dre:567858)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "17530925;18335061;22274699;23000899;24691442;26469318;27189481;28252024;33203921", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: EH487317.1, EH508951.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from EH496546.1 and EH444076.1. On May 25, 2016 this sequence version replaced XP_005172288.1., [RefSeq]; Data molecularly and functionally characterize one member of an evolutionarily dynamic gene family, plac8 onzin related protein 1 (ponzr1), in the zebrafish., [RefSeq, PubMed]; Excess PLAC8 promotes an unconventional ERK2-dependent EMT in colon cancer., [RefSeq, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1P986;A0AC58FZU2;A0AC58FZV0;A0AC58FZV1;A0AC58FZV2", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "GO:0072078 nephron tubule morphogenesis;GO:0048703 embryonic viscerocranium morphogenesis;GO:0035775 pronephric glomerulus morphogenesis", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "E7F147-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F154-1", "uniprot_id": [ { "id": "E7F154_DANRE", "url": "https://www.uniprot.org/uniprot/E7F154", "type": "external" } ], "mass": 27667.0, "length": 240, "protein_name": "Transmembrane emp24 domain-containing protein 6", "gene_name": "tmed6", "organism": "Zebrafish", "refseq_name": "transmembrane emp24 domain-containing protein 6", "refseq_ac": [ { "id": "XP_005163268", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005163268", "type": "external" } ], "gene_names_uniprotkb": "tmed6", "gene_names_refseq": "tmed6", "protein_names_uniprotkb": "Transmembrane emp24 domain-containing protein 6", "protein_names_refseq": "transmembrane emp24 domain-containing protein 6", "tax_id": 7955, "disease": "", "pathway": " (dre:101884766)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133200) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M2BA93", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005783 endoplasmic reticulum;GO:0005794 Golgi apparatus;GO:0030134 COPII-coated ER to Golgi transport vesicle;GO:0005789 endoplasmic reticulum membrane;GO:0005793 endoplasmic reticulum-Golgi intermediate compartment", "go_biological_process": "GO:0006886 intracellular protein transport;GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport;GO:0007030 Golgi organization", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7F154-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F166-1", "uniprot_id": [ { "id": "E7F166_DANRE", "url": "https://www.uniprot.org/uniprot/E7F166", "type": "external" } ], "mass": 57943.0, "length": 519, "protein_name": "Suppressor of cytokine signaling 6", "gene_name": "socs6a", "organism": "Zebrafish", "refseq_name": "suppressor of cytokine signaling 6", "refseq_ac": [ { "id": "XP_687041", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_687041", "type": "external" } ], "gene_names_uniprotkb": "socs6a", "gene_names_refseq": "socs6a", "protein_names_uniprotkb": "Suppressor of cytokine signaling 6", "protein_names_refseq": "suppressor of cytokine signaling 6", "tax_id": 7955, "disease": "", "pathway": " (dre:558703); (R-DRE-8951664)", "pathway_count": 2, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133199) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Feb 15, 2007 this sequence version replaced XP_687041.1. COMPLETENESS: full length., [RefSeq]; SOCS family proteins form part of a classical negative feedback system that regulates cytokine signal transduction. May be a substrate recognition component of a SCF-like ECS (Elongin BC-CUL2/5-SOCS-box protein) E3 ubiquitin-protein ligase complex which mediates the ubiquitination and subsequent proteasomal degradation of target proteins. Regulates KIT degradation by ubiquitination of the tyrosine-phosphorylated receptor., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8N7UUS2", "ec_number_list": [], "go_molecular_function": "GO:0035591 signaling adaptor activity", "go_cellular_component": "GO:0005829 cytosol", "go_biological_process": "GO:0035556 intracellular signal transduction;GO:0040008 regulation of growth;GO:0016567 protein ubiquitination;GO:0009968 negative regulation of signal transduction", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7F166-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F179-1", "uniprot_id": [ { "id": "E7F179_DANRE", "url": "https://www.uniprot.org/uniprot/E7F179", "type": "external" } ], "mass": 79757.0, "length": 728, "protein_name": "Leucine zipper putative tumor suppressor 3", "gene_name": "lzts3b", "organism": "Zebrafish", "refseq_name": "leucine zipper putative tumor suppressor 3", "refseq_ac": [ { "id": "XP_068079179", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_068079179", "type": "external" } ], "gene_names_uniprotkb": "lzts3b", "gene_names_refseq": "lzts3b", "protein_names_uniprotkb": "Leucine zipper putative tumor suppressor 3", "protein_names_refseq": "leucine zipper putative tumor suppressor 3", "tax_id": 7955, "disease": "", "pathway": " (dre:560221)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133183) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M3B1Q2", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005737 cytoplasm;GO:0043197 dendritic spine", "go_biological_process": "GO:0061001 regulation of dendritic spine morphogenesis", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7F179-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F184-1", "uniprot_id": [ { "id": "E7F184_DANRE", "url": "https://www.uniprot.org/uniprot/E7F184", "type": "external" } ], "mass": 64634.0, "length": 577, "protein_name": "SUN domain-containing protein 2", "gene_name": "sun2", "organism": "Zebrafish", "refseq_name": "SUN domain-containing protein 2", "refseq_ac": [ { "id": "XP_001919691", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_001919691", "type": "external" } ], "gene_names_uniprotkb": "sun2", "gene_names_refseq": "sun2", "protein_names_uniprotkb": "SUN domain-containing protein 2", "protein_names_refseq": "SUN domain-containing protein 2", "tax_id": 7955, "disease": "", "pathway": " (dre:796761)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133181) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1QKC1", "ec_number_list": [], "go_molecular_function": "GO:0043495 protein-membrane adaptor activity", "go_cellular_component": "GO:0005635 nuclear envelope;GO:0005637 nuclear inner membrane;GO:0034993 meiotic nuclear membrane microtubule tethering complex", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7F184-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F1C0-1", "uniprot_id": [ { "id": "E7F1C0_DANRE", "url": "https://www.uniprot.org/uniprot/E7F1C0", "type": "external" } ], "mass": 41212.0, "length": 361, "protein_name": "Oxytocin receptor", "gene_name": "avpr2b.1", "organism": "Zebrafish", "refseq_name": "oxytocin receptor", "refseq_ac": [ { "id": "XP_021327514", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021327514", "type": "external" } ], "gene_names_uniprotkb": "avpr2b.1", "gene_names_refseq": "avpr2b.1", "protein_names_uniprotkb": "Oxytocin receptor", "protein_names_refseq": "oxytocin receptor", "tax_id": 7955, "disease": "", "pathway": " (dre:100534787)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133181) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1RF13", "ec_number_list": [], "go_molecular_function": "GO:0005000 vasopressin receptor activity", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "GO:0007186 G protein-coupled receptor signaling pathway;GO:0032870 cellular response to hormone stimulus;GO:0045907 positive regulation of vasoconstriction;GO:0001992 regulation of systemic arterial blood pressure by vasopressin", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7F1C0-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F1C5-1", "uniprot_id": [ { "id": "E7F1C5_DANRE", "url": "https://www.uniprot.org/uniprot/E7F1C5", "type": "external" } ], "mass": 65410.0, "length": 571, "protein_name": "FERM domain-containing protein 5", "gene_name": "frmd5b", "organism": "Zebrafish", "refseq_name": "FERM domain-containing protein 5 isoform X1", "refseq_ac": [ { "id": "XP_698481", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_698481", "type": "external" } ], "gene_names_uniprotkb": "frmd5b", "gene_names_refseq": "frmd5b", "protein_names_uniprotkb": "FERM domain-containing protein 5", "protein_names_refseq": "FERM domain-containing protein 5 isoform X1", "tax_id": 7955, "disease": "autism spectrum disorder (Disease Ontology:DOID:0060041); neurodevelopmental disorder with eye movement abnormalities and ataxia (Disease Ontology:DOID:0081275)", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133182) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]; May be involved in regulation of cell migration. May regulate cell-matrix interactions via its interaction with ITGB5 and modifying ITGB5 cytoplasmic tail interactions such as with FERMT2 and TLN1. May regulate ROCK1 kinase activity possibly involved in regulation of actin stress fiber formation., [UniProtKB, UniProtKB]", "predicted_glycosites": 2, "predicted_n_glycosites": 0, "predicted_o_glycosites": 2, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 2, "glyco_site_count": 2, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M9Q2G8", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005856 cytoskeleton;GO:0005912 adherens junction", "go_biological_process": "GO:0031032 actomyosin structure organization", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7F1C5-1", "record_type": "protein", "filter_code": "0000000.0000010.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F1D1-1", "uniprot_id": [ { "id": "E7F1D1_DANRE", "url": "https://www.uniprot.org/uniprot/E7F1D1", "type": "external" } ], "mass": 31735.0, "length": 282, "protein_name": "NAD(P)(+)--arginine ADP-ribosyltransferase", "gene_name": "art4", "organism": "Zebrafish", "refseq_name": "ecto-ADP-ribosyltransferase 4 precursor", "refseq_ac": [ { "id": "NP_001303691", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001303691", "type": "external" } ], "gene_names_uniprotkb": "art4", "gene_names_refseq": "art4", "protein_names_uniprotkb": "NAD(P)(+)--arginine ADP-ribosyltransferase; 2.4.2.31; Mono(ADP-ribosyl)transferase", "protein_names_refseq": "ADP-ribosyltransferase 4 (Dombrock blood group); ecto-ADP-ribosyltransferase 4 precursor", "tax_id": 7955, "disease": "", "pathway": " (dre:555597)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "12477932;21873635", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC065691.1, CN171882.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA4476759, SAMEA4476765 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000003.1 and BC065691.1. On Oct 24, 2015 this sequence version replaced XP_683240.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1P856", "ec_number_list": [ { "id": "2.4.2.31", "url": "https://www.rhea-db.org/rhea/?query=ec:2.4.2.31", "type": "external" } ], "go_molecular_function": "GO:0016779 nucleotidyltransferase activity;GO:0003950 NAD+ poly-ADP-ribosyltransferase activity;GO:0106274 NAD+-protein-arginine ADP-ribosyltransferase activity", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "E7F1D1-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F1D2-1", "uniprot_id": [ { "id": "E7F1D2_DANRE", "url": "https://www.uniprot.org/uniprot/E7F1D2", "type": "external" } ], "mass": 31329.0, "length": 273, "protein_name": "PAXIP1-associated glutamate-rich protein 1", "gene_name": "pagr1", "organism": "Zebrafish", "refseq_name": "PAXIP1-associated glutamate-rich protein 1", "refseq_ac": [ { "id": "NP_001313618", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001313618", "type": "external" } ], "gene_names_uniprotkb": "pagr1; c16orf53; wu:fd61a05", "gene_names_refseq": "c16orf53; pagr1; wu:fd61a05", "protein_names_uniprotkb": "PAXIP1-associated glutamate-rich protein 1", "protein_names_refseq": "PAXIP1-associated glutamate-rich protein 1", "tax_id": 7955, "disease": "esophagus squamous cell carcinoma (Disease Ontology:DOID:3748)", "pathway": " (dre:326076)", "pathway_count": 1, "publication_count": 3, "publication_id_list": "22566537;26469318;28934389", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: EH579597.1, SRR26395028.361104.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505371, SAMEA3505372 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000012.1, EH579597.1, EH585411.1 and EH559079.1. On May 24, 2016 this sequence version replaced XP_002663937.1. Transcript Variant: This variant (1) represents the longer transcript. Both variants 1 and 2 encode the same protein., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1P2V7", "ec_number_list": [], "go_molecular_function": "GO:0030331 nuclear estrogen receptor binding", "go_cellular_component": "GO:0044666 MLL3/4 complex", "go_biological_process": "GO:0007420 brain development;GO:0033148 positive regulation of intracellular estrogen receptor signaling pathway;GO:1902808 positive regulation of cell cycle G1/S phase transition", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "E7F1D2-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F1D9-1", "uniprot_id": [ { "id": "E7F1D9_DANRE", "url": "https://www.uniprot.org/uniprot/E7F1D9", "type": "external" } ], "mass": 61426.0, "length": 547, "protein_name": "Synaptotagmin-9", "gene_name": "syt9a", "organism": "Zebrafish", "refseq_name": "synaptotagmin-9", "refseq_ac": [ { "id": "XP_001336058", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_001336058", "type": "external" } ], "gene_names_uniprotkb": "syt9a", "gene_names_refseq": "syt9a", "protein_names_uniprotkb": "Synaptotagmin-9", "protein_names_refseq": "synaptotagmin-9", "tax_id": 7955, "disease": "", "pathway": " (dre:798433)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133193) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Mar 23, 2011 this sequence version replaced XP_001336058.3. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1Q755", "ec_number_list": [], "go_molecular_function": "GO:0046872 metal ion binding;GO:0005544 calcium-dependent phospholipid binding;GO:0000149 SNARE binding;GO:0061891 calcium ion sensor activity", "go_cellular_component": "GO:0005886 plasma membrane;GO:0045202 synapse;GO:0030658 transport vesicle membrane;GO:0070382 exocytic vesicle;GO:0031045 dense core granule", "go_biological_process": "GO:0007268 chemical synaptic transmission;GO:0016192 vesicle-mediated transport;GO:0031340 positive regulation of vesicle fusion;GO:0017158 regulation of calcium ion-dependent exocytosis", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7F1D9-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F1E4-1", "uniprot_id": [ { "id": "E7F1E4_DANRE", "url": "https://www.uniprot.org/uniprot/E7F1E4", "type": "external" } ], "mass": 88230.0, "length": 800, "protein_name": "Probable G-protein coupled receptor 156 isoform X1", "gene_name": "gpr156", "organism": "Zebrafish", "refseq_name": "probable G-protein coupled receptor 156 isoform X1", "refseq_ac": [ { "id": "XP_005167483", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005167483", "type": "external" } ], "gene_names_uniprotkb": "gpr156", "gene_names_refseq": "gpr156", "protein_names_uniprotkb": "Probable G-protein coupled receptor 156 isoform X1", "protein_names_refseq": "probable G-protein coupled receptor 156 isoform X1", "tax_id": 7955, "disease": "autosomal recessive nonsyndromic deafness (Disease Ontology:DOID:0050565)", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133184) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M2BFG5;A0AC58GFT2;A0AC58GFT3;A0AC58GFU1", "ec_number_list": [], "go_molecular_function": "GO:0004965 G protein-coupled GABA receptor activity", "go_cellular_component": "GO:0038039 G protein-coupled receptor heterodimeric complex", "go_biological_process": "GO:0007214 gamma-aminobutyric acid signaling pathway;GO:0035677 posterior lateral line neuromast hair cell development", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7F1E4-1", "record_type": "protein", "filter_code": "0000000.0000010.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F1F5-1", "uniprot_id": [ { "id": "E7F1F5_DANRE", "url": "https://www.uniprot.org/uniprot/E7F1F5", "type": "external" } ], "mass": 7490.0, "length": 69, "protein_name": "Guanine nucleotide-binding protein subunit gamma", "gene_name": "gngt2b", "organism": "Zebrafish", "refseq_name": "guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-T2b", "refseq_ac": [ { "id": "NP_001191261", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001191261", "type": "external" } ], "gene_names_uniprotkb": "gngt2b", "gene_names_refseq": "gngt2b", "protein_names_uniprotkb": "Guanine nucleotide-binding protein subunit gamma", "protein_names_refseq": "guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-T2b", "tax_id": 7955, "disease": "", "pathway": " (dre:797361)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "19786091;22814267;24924194;25806532;26876635;29610331;34462505", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: EH448553.1, CN503955.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from EH448553.1, EH451547.1 and EH447731.1., [RefSeq]; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NYL7", "ec_number_list": [], "go_molecular_function": "GO:0031681 G-protein beta-subunit binding", "go_cellular_component": "GO:0005834 heterotrimeric G-protein complex", "go_biological_process": "GO:0007186 G protein-coupled receptor signaling pathway", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "E7F1F5-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F1M2-1", "uniprot_id": [ { "id": "E7F1M2_DANRE", "url": "https://www.uniprot.org/uniprot/E7F1M2", "type": "external" } ], "mass": 46438.0, "length": 397, "protein_name": "XK-related protein", "gene_name": "xkr8.4", "organism": "Zebrafish", "refseq_name": "XK-related protein 8", "refseq_ac": [ { "id": "XP_005170156", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005170156", "type": "external" } ], "gene_names_uniprotkb": "xkr8.4", "gene_names_refseq": "xkr8.4", "protein_names_uniprotkb": "XK-related protein", "protein_names_refseq": "XK-related protein 8", "tax_id": 7955, "disease": "", "pathway": " (dre:101882552)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133194) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M2BHG1", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "GO:0043652 engulfment of apoptotic cell;GO:0070782 phosphatidylserine exposure on apoptotic cell surface;GO:1902742 apoptotic process involved in development", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7F1M2-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F1N2-1", "uniprot_id": [ { "id": "E7F1N2_DANRE", "url": "https://www.uniprot.org/uniprot/E7F1N2", "type": "external" } ], "mass": 48406.0, "length": 416, "protein_name": "Cytohesin-2", "gene_name": "cyth2", "organism": "Zebrafish", "refseq_name": "cytohesin-2", "refseq_ac": [ { "id": "XP_005157903", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005157903", "type": "external" } ], "gene_names_uniprotkb": "cyth2", "gene_names_refseq": "cyth2", "protein_names_uniprotkb": "Cytohesin-2; PH, SEC7 and coiled-coil domain-containing protein 2", "protein_names_refseq": "cytohesin-2", "tax_id": 7955, "disease": "", "pathway": " (dre:569358); (R-DRE-6811438)", "pathway_count": 2, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133191) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M2B4T7", "ec_number_list": [], "go_molecular_function": "GO:0008289 lipid binding;GO:0005085 guanyl-nucleotide exchange factor activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005886 plasma membrane;GO:0030426 growth cone", "go_biological_process": "GO:0016192 vesicle-mediated transport;GO:0032012 regulation of ARF protein signal transduction", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7F1N2-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F1R5-1", "uniprot_id": [ { "id": "E7F1R5_DANRE", "url": "https://www.uniprot.org/uniprot/E7F1R5", "type": "external" } ], "mass": 25435.0, "length": 228, "protein_name": "Voltage-dependent calcium channel gamma-1 subunit", "gene_name": "cacng1b", "organism": "Zebrafish", "refseq_name": "voltage-dependent calcium channel gamma-1 subunit", "refseq_ac": [ { "id": "XP_699850", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_699850", "type": "external" } ], "gene_names_uniprotkb": "cacng1b", "gene_names_refseq": "cacng1b", "protein_names_uniprotkb": "Voltage-dependent calcium channel gamma-1 subunit; Dihydropyridine-sensitive L-type, skeletal muscle calcium channel subunit gamma", "protein_names_refseq": "voltage-dependent calcium channel gamma-1 subunit", "tax_id": 7955, "disease": "malignant hyperthermia (Disease Ontology:DOID:8545)", "pathway": " (dre:571193)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133178) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Feb 15, 2007 this sequence version replaced XP_699850.1. COMPLETENESS: full length., [RefSeq]; Regulatory subunit of the voltage-gated calcium channel that gives rise to L-type calcium currents in skeletal muscle. Regulates channel inactivation kinetics., [UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8N7T8E5", "ec_number_list": [], "go_molecular_function": "GO:0005246 calcium channel regulator activity;GO:0005245 voltage-gated calcium channel activity", "go_cellular_component": "GO:1990454 L-type voltage-gated calcium channel complex", "go_biological_process": "GO:1902514 regulation of calcium ion transmembrane transport via high voltage-gated calcium channel", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7F1R5-1", "record_type": "protein", "filter_code": "0000000.0000011.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F1U0-1", "uniprot_id": [ { "id": "E7F1U0_DANRE", "url": "https://www.uniprot.org/uniprot/E7F1U0", "type": "external" } ], "mass": 78289.0, "length": 685, "protein_name": "Myogenesis-regulating glycosidase", "gene_name": "myorg", "organism": "Zebrafish", "refseq_name": "myogenesis-regulating glycosidase", "refseq_ac": [ { "id": "XP_068072112", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_068072112", "type": "external" } ], "gene_names_uniprotkb": "myorg", "gene_names_refseq": "myorg", "protein_names_uniprotkb": "Myogenesis-regulating glycosidase", "protein_names_refseq": "myogenesis-regulating glycosidase", "tax_id": 7955, "disease": "basal ganglia calcification (Disease Ontology:DOID:0060230)", "pathway": " (dre:100537539)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133196) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1RTD6;A0AC58IAA0", "ec_number_list": [], "go_molecular_function": "GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds;GO:0016798 hydrolase activity, acting on glycosyl bonds", "go_cellular_component": "", "go_biological_process": "GO:0005975 carbohydrate metabolic process;GO:0048741 skeletal muscle fiber development", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7F1U0-1", "record_type": "protein", "filter_code": "0000000.0000011.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F1V3-1", "uniprot_id": [ { "id": "E7F1V3_DANRE", "url": "https://www.uniprot.org/uniprot/E7F1V3", "type": "external" } ], "mass": 100970.0, "length": 893, "protein_name": "TBC domain-containing protein kinase-like protein", "gene_name": "tbck", "organism": "Zebrafish", "refseq_name": "TBC domain-containing protein kinase-like protein", "refseq_ac": [ { "id": "NP_001074106", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001074106", "type": "external" } ], "gene_names_uniprotkb": "tbck; im:7138354; wu:fc74a10; zgc:158710", "gene_names_refseq": "im:7138354; tbck; wu:fc74a10; zgc:158710", "protein_names_uniprotkb": "TBC domain-containing protein kinase-like protein", "protein_names_refseq": "TBC domain-containing protein kinase-like protein", "tax_id": 7955, "disease": "infantile hypotonia with psychomotor retardation and characteristic facies-3 (Disease Ontology:DOID:0060935)", "pathway": " (dre:791155)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "26469318;36574072", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GDQQ01004662.1, SRR32588730.22707759.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000001.1. On May 7, 2009 this sequence version replaced NP_001074106.1., [RefSeq]; Component of the FERRY complex (Five-subunit Endosomal Rab5 and RNA/ribosome intermediary). The FERRY complex directly interacts with mRNAs and RAB5A, and functions as a RAB5A effector involved in the localization and the distribution of specific mRNAs most likely by mediating their endosomal transport. The complex recruits mRNAs and ribosomes to early endosomes through direct mRNA-interaction. Also involved in the modulation of mTOR signaling and expression of mTOR complex components. Involved in the control of actin-cytoskeleton organization., [UniProtKB, UniProtKB]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NCW1;A0AC58JFP5", "ec_number_list": [], "go_molecular_function": "GO:0004672 protein kinase activity;GO:0005096 GTPase activator activity;GO:0005524 ATP binding", "go_cellular_component": "GO:0005769 early endosome;GO:0005819 spindle;GO:0030496 midbody", "go_biological_process": "GO:0007507 heart development", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "E7F1V3-1", "record_type": "protein", "filter_code": "0000000.0000111.010000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F1X6-1", "uniprot_id": [ { "id": "E7F1X6_DANRE", "url": "https://www.uniprot.org/uniprot/E7F1X6", "type": "external" } ], "mass": 9102.0, "length": 81, "protein_name": "Centromere protein X", "gene_name": "cenpx", "organism": "Zebrafish", "refseq_name": "centromere protein X", "refseq_ac": [ { "id": "NP_001289984", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001289984", "type": "external" } ], "gene_names_uniprotkb": "cenpx; si:ch73-362i18.3; stra13", "gene_names_refseq": "cenpx; si:ch73-362i18.3; stra13", "protein_names_uniprotkb": "Centromere protein X", "protein_names_refseq": "centromere protein X; stimulated by retinoic acid 13 homolog", "tax_id": 7955, "disease": "", "pathway": " (dre:100332714); (R-DRE-6783310); (R-DRE-9833482)", "pathway_count": 3, "publication_count": 6, "publication_id_list": "26469318;27189481;31307377;31417608;34725363;35445010", "class_list": "", "function": "", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1P1P8", "ec_number_list": [], "go_molecular_function": "GO:0003677 DNA binding;GO:0046982 protein heterodimerization activity", "go_cellular_component": "GO:0043240 Fanconi anaemia nuclear complex;GO:0071821 FANCM-MHF complex", "go_biological_process": "GO:0000712 resolution of meiotic recombination intermediates;GO:0051382 kinetochore assembly;GO:0006281 DNA repair;GO:0031297 replication fork processing", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "E7F1X6-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F242-1", "uniprot_id": [ { "id": "E7F242_DANRE", "url": "https://www.uniprot.org/uniprot/E7F242", "type": "external" } ], "mass": 86149.0, "length": 779, "protein_name": "Zinc finger FYVE domain-containing protein 1", "gene_name": "zfyve1", "organism": "Zebrafish", "refseq_name": "zinc finger FYVE domain-containing protein 1", "refseq_ac": [ { "id": "XP_001344703", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_001344703", "type": "external" } ], "gene_names_uniprotkb": "zfyve1", "gene_names_refseq": "zfyve1", "protein_names_uniprotkb": "Zinc finger FYVE domain-containing protein 1", "protein_names_refseq": "zinc finger FYVE domain-containing protein 1", "tax_id": 7955, "disease": "", "pathway": " (dre:100005732)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133195) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1PZU1", "ec_number_list": [], "go_molecular_function": "GO:0005547 phosphatidylinositol-3,4,5-trisphosphate binding;GO:0008270 zinc ion binding;GO:0043325 phosphatidylinositol-3,4-bisphosphate binding;GO:0005545 1-phosphatidylinositol binding;GO:0032266 phosphatidylinositol-3-phosphate binding", "go_cellular_component": "GO:0005811 lipid droplet", "go_biological_process": "GO:0140042 lipid droplet formation", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7F242-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F290-1", "uniprot_id": [ { "id": "E7F290_DANRE", "url": "https://www.uniprot.org/uniprot/E7F290", "type": "external" } ], "mass": 13044.0, "length": 123, "protein_name": "Uncharacterized protein si:ch211-222l21.1", "gene_name": "si:ch211-222l21.1", "organism": "Zebrafish", "refseq_name": "uncharacterized protein si:ch211-222l21.1", "refseq_ac": [ { "id": "XP_005155974", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005155974", "type": "external" } ], "gene_names_uniprotkb": "si:ch211-222l21.1", "gene_names_refseq": "si:ch211-222l21.1", "protein_names_uniprotkb": "Uncharacterized protein si:ch211-222l21.1", "protein_names_refseq": "uncharacterized protein si:ch211-222l21.1", "tax_id": 7955, "disease": "", "pathway": " (dre:795027)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133186) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M2B1X8", "ec_number_list": [], "go_molecular_function": "GO:0042393 histone binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0043066 negative regulation of apoptotic process;GO:0045944 positive regulation of transcription by RNA polymerase II", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7F290-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F292-1", "uniprot_id": [ { "id": "E7F292_DANRE", "url": "https://www.uniprot.org/uniprot/E7F292", "type": "external" } ], "mass": 41837.0, "length": 362, "protein_name": "mitogen-activated protein kinase", "gene_name": "mapk13", "organism": "Zebrafish", "refseq_name": "mitogen-activated protein kinase 13", "refseq_ac": [ { "id": "XP_001337833", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_001337833", "type": "external" } ], "gene_names_uniprotkb": "mapk13", "gene_names_refseq": "mapk13", "protein_names_uniprotkb": "mitogen-activated protein kinase; 2.7.11.24", "protein_names_refseq": "mitogen-activated protein kinase 13", "tax_id": 7955, "disease": "", "pathway": " (dre:100002318); (R-DRE-168638); (R-DRE-4420097)", "pathway_count": 3, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133183) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 9, 2008 this sequence version replaced XP_001337833.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1PUK7", "ec_number_list": [ { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.7.11.13", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.13", "type": "external" }, { "id": "2.7.11.25", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.25", "type": "external" }, { "id": "2.7.10.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.1", "type": "external" }, { "id": "2.7.11.22", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.22", "type": "external" }, { "id": "2.7.11.21", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.21", "type": "external" }, { "id": "2.7.11.17", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.17", "type": "external" }, { "id": "2.7.12.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.1", "type": "external" }, { "id": "2.7.12.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.2", "type": "external" }, { "id": "2.7.11.24", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.24", "type": "external" }, { "id": "2.7.10.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.2", "type": "external" }, { "id": "2.7.11.23", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.23", "type": "external" }, { "id": "2.7.1.150", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.150", "type": "external" }, { "id": "2.7.11.12", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.12", "type": "external" }, { "id": "2.7.11.39", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.39", "type": "external" }, { "id": "2.7.11.11", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.11", "type": "external" }, { "id": "2.7.1.153", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.153", "type": "external" }, { "id": "2.7.1.137", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.137", "type": "external" }, { "id": "2.7.1.154", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.154", "type": "external" }, { "id": "2.7.11.26", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.26", "type": "external" }, { "id": "2.7.11.31", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.31", "type": "external" } ], "go_molecular_function": "GO:0004674 protein serine/threonine kinase activity;GO:0005524 ATP binding;GO:0004707 MAP kinase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0035556 intracellular signal transduction", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7F292-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F293-1", "uniprot_id": [ { "id": "E7F293_DANRE", "url": "https://www.uniprot.org/uniprot/E7F293", "type": "external" } ], "mass": 48356.0, "length": 442, "protein_name": "CUGBP Elav-like family member 3", "gene_name": "celf3b", "organism": "Zebrafish", "refseq_name": "CUGBP Elav-like family member 3", "refseq_ac": [ { "id": "XP_021322469", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021322469", "type": "external" } ], "gene_names_uniprotkb": "celf3b", "gene_names_refseq": "celf3b", "protein_names_uniprotkb": "CUGBP Elav-like family member 3", "protein_names_refseq": "CUGBP Elav-like family member 3", "tax_id": 7955, "disease": "", "pathway": " (dre:100333973)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133191) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M9PDB3", "ec_number_list": [], "go_molecular_function": "GO:0003729 mRNA binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:1990904 ribonucleoprotein complex", "go_biological_process": "GO:0006376 mRNA splice site recognition;GO:0000381 regulation of alternative mRNA splicing, via spliceosome", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7F293-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F2A7-1", "uniprot_id": [ { "id": "E7F2A7_DANRE", "url": "https://www.uniprot.org/uniprot/E7F2A7", "type": "external" } ], "mass": 59411.0, "length": 528, "protein_name": "Reduced folate transporter", "gene_name": "slc19a1", "organism": "Zebrafish", "refseq_name": "reduced folate transporter", "refseq_ac": [ { "id": "XP_009300585", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009300585", "type": "external" } ], "gene_names_uniprotkb": "slc19a1", "gene_names_refseq": "slc19a1", "protein_names_uniprotkb": "Reduced folate transporter", "protein_names_refseq": "reduced folate transporter", "tax_id": 7955, "disease": "biotin-responsive basal ganglia disease (Disease Ontology:DOID:0050659); dextro-looped transposition of the great arteries (Disease Ontology:DOID:0060770); immunodeficiency 114 (Disease Ontology:DOID:0061080); malaria (Disease Ontology:DOID:12365); hematologic cancer (Disease Ontology:DOID:2531); abdominal aortic aneurysm (Disease Ontology:DOID:7693); chronic kidney disease (Disease Ontology:DOID:784); cleft lip (Disease Ontology:DOID:9296)", "pathway": " (dre:497434); (R-DRE-196757)", "pathway_count": 2, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133181) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 8, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M6Z7F2;A0AC58JUD0;A0AC58JUD4;A0AC58JUD6;A0AC58JUE1;A0AC58JUE5;A0AC58JUE6;A0AC58JUE7;A0AC58JUE9;A0AC58JUF0;A0AC58JUF3;A0AC58JUF6;A0AC58JUG4;A0AC58JUG7;A0AC58JUH9;A0AC58JUJ6;A0AC58JUK1", "ec_number_list": [], "go_molecular_function": "GO:0090482 vitamin transmembrane transporter activity;GO:0005542 folic acid binding", "go_cellular_component": "GO:0005886 plasma membrane;GO:0016323 basolateral plasma membrane;GO:0016324 apical plasma membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7F2A7-1", "record_type": "protein", "filter_code": "0000000.0000011.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F2D6-1", "uniprot_id": [ { "id": "E7F2D6_DANRE", "url": "https://www.uniprot.org/uniprot/E7F2D6", "type": "external" } ], "mass": 42293.0, "length": 369, "protein_name": "Twinfilin-2b isoform X1", "gene_name": "twf2b", "organism": "Zebrafish", "refseq_name": "twinfilin-2b isoform X1", "refseq_ac": [ { "id": "XP_009304210", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009304210", "type": "external" } ], "gene_names_uniprotkb": "twf2b; si:ch211-14i3.4; zgc:112092", "gene_names_refseq": "si:ch211-14i3.4; twf2b; zgc:112092", "protein_names_uniprotkb": "Twinfilin-2b isoform X1", "protein_names_refseq": "twinfilin-2b isoform X1", "tax_id": 7955, "disease": "", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133186) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M3B3Z6", "ec_number_list": [], "go_molecular_function": "GO:0003785 actin monomer binding;GO:0051015 actin filament binding", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005884 actin filament;GO:0048471 perinuclear region of cytoplasm;GO:0030016 myofibril", "go_biological_process": "GO:0010976 positive regulation of neuron projection development;GO:0051016 barbed-end actin filament capping;GO:0010591 regulation of lamellipodium assembly;GO:0030042 actin filament depolymerization", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7F2D6-1", "record_type": "protein", "filter_code": "0000000.0000000.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F2E5-1", "uniprot_id": [ { "id": "E7F2E5_DANRE", "url": "https://www.uniprot.org/uniprot/E7F2E5", "type": "external" } ], "mass": 46438.0, "length": 397, "protein_name": "XK-related protein", "gene_name": "xkr8.1", "organism": "Zebrafish", "refseq_name": "XK-related protein 8 isoform X2", "refseq_ac": [ { "id": "XP_003200650", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003200650", "type": "external" } ], "gene_names_uniprotkb": "xkr8.1", "gene_names_refseq": "xkr8.1", "protein_names_uniprotkb": "XK-related protein", "protein_names_refseq": "XK-related protein 8 isoform X2", "tax_id": 7955, "disease": "", "pathway": " (dre:100535571)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133194) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Aug 1, 2013 this sequence version replaced XP_003200650.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1RP22", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "GO:0043652 engulfment of apoptotic cell;GO:0070782 phosphatidylserine exposure on apoptotic cell surface;GO:1902742 apoptotic process involved in development", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7F2E5-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F2E7-1", "uniprot_id": [ { "id": "E7F2E7_DANRE", "url": "https://www.uniprot.org/uniprot/E7F2E7", "type": "external" } ], "mass": 25019.0, "length": 220, "protein_name": "Mitochondrial assembly of ribosomal large subunit protein 1", "gene_name": "malsu1", "organism": "Zebrafish", "refseq_name": "mitochondrial assembly of ribosomal large subunit protein 1", "refseq_ac": [ { "id": "NP_001313544", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001313544", "type": "external" } ], "gene_names_uniprotkb": "malsu1; fe14g02; si:zfos-1192g2.3; wu:fe14g02", "gene_names_refseq": "fe14g02; malsu1; si:zfos-1192g2.3; wu:fe14g02", "protein_names_uniprotkb": "Mitochondrial assembly of ribosomal large subunit protein 1", "protein_names_refseq": "mitochondrial assembly of ribosomal large subunit protein 1", "tax_id": 7955, "disease": "", "pathway": " (dre:796868); (R-DRE-9937383)", "pathway_count": 2, "publication_count": 1, "publication_id_list": "26469318", "class_list": "", "function": "Required for normal mitochondrial ribosome function and mitochondrial translation. May play a role in ribosome biogenesis by preventing premature association of the 28S and 39S ribosomal subunits. Interacts with mitochondrial ribosomal protein uL14m (MRPL14), probably blocking formation of intersubunit bridge B8, preventing association of the 28S and 39S ribosomal subunits. Addition to isolated mitochondrial ribosomal subunits partially inhibits translation, probably by interfering with the association of the 28S and 39S ribosomal subunits and the formation of functional ribosomes. May also participate in the assembly and/or regulation of the stability of the large subunit of the mitochondrial ribosome. May function as a ribosomal silencing factor., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1P8V5", "ec_number_list": [], "go_molecular_function": "GO:0043023 ribosomal large subunit binding", "go_cellular_component": "GO:0005739 mitochondrion", "go_biological_process": "GO:0017148 negative regulation of translation;GO:0090071 negative regulation of ribosome biogenesis", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "E7F2E7-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F2H8-1", "uniprot_id": [ { "id": "E7F2H8_DANRE", "url": "https://www.uniprot.org/uniprot/E7F2H8", "type": "external" } ], "mass": 51588.0, "length": 442, "protein_name": "Carboxypeptidase A6", "gene_name": "cpa6", "organism": "Zebrafish", "refseq_name": "carboxypeptidase A6", "refseq_ac": [ { "id": "XP_021325980", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021325980", "type": "external" } ], "gene_names_uniprotkb": "cpa6", "gene_names_refseq": "cpa6", "protein_names_uniprotkb": "Carboxypeptidase A6", "protein_names_refseq": "carboxypeptidase A6", "tax_id": 7955, "disease": "familial temporal lobe epilepsy 5 (Disease Ontology:DOID:0060752); familial febrile seizures 11 (Disease Ontology:DOID:0111308)", "pathway": " (dre:100002342)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133199) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 2, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M9PXW2", "ec_number_list": [], "go_molecular_function": "GO:0008270 zinc ion binding;GO:0004180 carboxypeptidase activity;GO:0004181 metallocarboxypeptidase activity", "go_cellular_component": "GO:0005615 extracellular space", "go_biological_process": "GO:0006508 proteolysis", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7F2H8-1", "record_type": "protein", "filter_code": "0000000.0000011.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F2H9-1", "uniprot_id": [ { "id": "E7F2H9_DANRE", "url": "https://www.uniprot.org/uniprot/E7F2H9", "type": "external" } ], "mass": 182159.0, "length": 1600, "protein_name": "Phosphatidylinositol 3,4,5-trisphosphate-dependent Rac exchanger 2 protein", "gene_name": "prex2", "organism": "Zebrafish", "refseq_name": "phosphatidylinositol 3,4,5-trisphosphate-dependent Rac exchanger 2 protein isoform X1", "refseq_ac": [ { "id": "XP_001923357", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_001923357", "type": "external" } ], "gene_names_uniprotkb": "prex2", "gene_names_refseq": "prex2", "protein_names_uniprotkb": "Phosphatidylinositol 3,4,5-trisphosphate-dependent Rac exchanger 2 protein; DEP domain-containing protein 2", "protein_names_refseq": "phosphatidylinositol 3,4,5-trisphosphate-dependent Rac exchanger 2 protein isoform X1", "tax_id": 7955, "disease": "hepatitis B (Disease Ontology:DOID:2043); lung squamous cell carcinoma (Disease Ontology:DOID:3907); lung non-small cell carcinoma (Disease Ontology:DOID:3908); Klatskin's tumor (Disease Ontology:DOID:4927); cholangiocarcinoma (Disease Ontology:DOID:4947); hepatocellular carcinoma (Disease Ontology:DOID:684)", "pathway": " (dre:557288); (R-DRE-8948751); (R-DRE-8980692); (R-DRE-9013148); (R-DRE-9013149)", "pathway_count": 5, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133199) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]; Functions as a RAC1 guanine nucleotide exchange factor (GEF), activating Rac proteins by exchanging bound GDP for free GTP. Its activity is synergistically activated by phosphatidylinositol 3,4,5-trisphosphate and the beta gamma subunits of heterotrimeric G protein. Mediates the activation of RAC1 in a PI3K-dependent manner. May be an important mediator of Rac signaling, acting directly downstream of both G protein-coupled receptors and phosphoinositide 3-kinase., [UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 6, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1QHV7", "ec_number_list": [], "go_molecular_function": "GO:0005096 GTPase activator activity;GO:0005085 guanyl-nucleotide exchange factor activity;GO:0030291 protein serine/threonine kinase inhibitor activity", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "GO:0007186 G protein-coupled receptor signaling pathway;GO:0035556 intracellular signal transduction;GO:0032007 negative regulation of TOR signaling", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7F2H9-1", "record_type": "protein", "filter_code": "0000000.0000011.010000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F2I0-1", "uniprot_id": [ { "id": "E7F2I0_DANRE", "url": "https://www.uniprot.org/uniprot/E7F2I0", "type": "external" } ], "mass": 81955.0, "length": 728, "protein_name": "Antigen peptide transporter 2", "gene_name": "tap2t", "organism": "Zebrafish", "refseq_name": "antigen peptide transporter 2", "refseq_ac": [ { "id": "XP_073774608", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_073774608", "type": "external" } ], "gene_names_uniprotkb": "tap2t", "gene_names_refseq": "tap2t", "protein_names_uniprotkb": "Antigen peptide transporter 2; 7.4.2.14; ATP-binding cassette sub-family B member 3", "protein_names_refseq": "antigen peptide transporter 2", "tax_id": 7955, "disease": "lymphoproliferative syndrome (Disease Ontology:DOID:0060704); aspirin-induced respiratory disease (Disease Ontology:DOID:0080822); tuberculoid leprosy (Disease Ontology:DOID:1025); Alzheimer's disease (Disease Ontology:DOID:10652); dengue hemorrhagic fever (Disease Ontology:DOID:12206); limited scleroderma (Disease Ontology:DOID:1577); diffuse scleroderma (Disease Ontology:DOID:1580); multiple sclerosis (Disease Ontology:DOID:2377); cervix carcinoma (Disease Ontology:DOID:2893); pulmonary tuberculosis (Disease Ontology:DOID:2957); allergic contact dermatitis (Disease Ontology:DOID:3042); esophagus squamous cell carcinoma (Disease Ontology:DOID:3748); cervical cancer (Disease Ontology:DOID:4362); reactive arthritis (Disease Ontology:DOID:6196); ankylosing spondylitis (Disease Ontology:DOID:7147); rheumatoid arthritis (Disease Ontology:DOID:7148); psoriasis (Disease Ontology:DOID:8893); systemic lupus erythematosus (Disease Ontology:DOID:9074); type 1 diabetes mellitus (Disease Ontology:DOID:9744)", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133187) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 19, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M3BE92;A0AC58GY03", "ec_number_list": [ { "id": "7.4.2.14", "url": "https://www.rhea-db.org/rhea/?query=ec:7.4.2.14", "type": "external" } ], "go_molecular_function": "GO:0046978 TAP1 binding;GO:0005524 ATP binding;GO:0046872 metal ion binding;GO:0016887 ATP hydrolysis activity;GO:0015440 ABC-type peptide transporter activity", "go_cellular_component": "GO:0016020 membrane;GO:0042824 MHC class I peptide loading complex", "go_biological_process": "GO:0015031 protein transport;GO:0055085 transmembrane transport;GO:0002250 adaptive immune response;GO:0019885 antigen processing and presentation of endogenous peptide antigen via MHC class I", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7F2I0-1", "record_type": "protein", "filter_code": "0000000.0000010.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F2L5-1", "uniprot_id": [ { "id": "E7F2L5_DANRE", "url": "https://www.uniprot.org/uniprot/E7F2L5", "type": "external" } ], "mass": 26665.0, "length": 238, "protein_name": "Calcipressin-2 isoform 1", "gene_name": "rcan2", "organism": "Zebrafish", "refseq_name": "calcipressin-2 isoform 1", "refseq_ac": [ { "id": "NP_001307157", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001307157", "type": "external" } ], "gene_names_uniprotkb": "rcan2; DSCR1L1; si:ch211-124g24.1; zgc:85746", "gene_names_refseq": "DSCR1L1; rcan2; si:ch211-124g24.1; zgc:85746", "protein_names_uniprotkb": "Calcipressin-2 isoform 1", "protein_names_refseq": "Down syndrome critical region gene 1-like 1; calcipressin-2 isoform 1", "tax_id": 7955, "disease": "", "pathway": " (dre:407988)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "26469318;27189481;29643119;38527087", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GFIL01032435.1, GDQQ01013094.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505388, SAMEA4476732 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000020.1. On Feb 17, 2016 this sequence version replaced XP_005160873.1. Transcript Variant: This variant (1) represents the longer transcript and encodes the longer isoform (1). Sequence Note: This RefSeq record was created from genomic sequence data because no single transcript from the reference genome strain was available for the full length of the gene. The extent of this transcript is supported by transcript alignments., [RefSeq]; Inhibits calcineurin-dependent transcriptional responses by binding to the catalytic domain of calcineurin A. Could play a role during central nervous system development., [UniProtKB, UniProtKB]; The scale of zebrafish pectoral fin buds is determined by intercellular K+ levels and consequent Ca2+-mediated signaling via retinoic acid regulation of Rcan2 and Kcnk5b. Publication Status: Online-Only, [RefSeq, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1P7L9", "ec_number_list": [], "go_molecular_function": "GO:0003676 nucleic acid binding;GO:0008597 calcium-dependent protein serine/threonine phosphatase regulator activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm", "go_biological_process": "GO:0019722 calcium-mediated signaling", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "E7F2L5-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F2R0-1", "uniprot_id": [ { "id": "E7F2R0_DANRE", "url": "https://www.uniprot.org/uniprot/E7F2R0", "type": "external" } ], "mass": 49964.0, "length": 440, "protein_name": "Flavin-containing monooxygenase", "gene_name": "LOC793236", "organism": "Zebrafish", "refseq_name": "uncharacterized protein", "refseq_ac": [ { "id": "XP_001332968", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_001332968", "type": "external" } ], "gene_names_uniprotkb": "LOC793236", "gene_names_refseq": "LOC793236", "protein_names_uniprotkb": "Flavin-containing monooxygenase; 1.-.-.-", "protein_names_refseq": "uncharacterized protein", "tax_id": 7955, "disease": "", "pathway": " (dre:793236)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133185) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Mar 23, 2011 this sequence version replaced XP_001332968.3. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1PU64", "ec_number_list": [], "go_molecular_function": "GO:0050660 flavin adenine dinucleotide binding;GO:0050661 NADP binding;GO:0004497 monooxygenase activity;GO:0004499 N,N-dimethylaniline monooxygenase activity", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7F2R0-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F2R3-1", "uniprot_id": [ { "id": "E7F2R3_DANRE", "url": "https://www.uniprot.org/uniprot/E7F2R3", "type": "external" } ], "mass": 98035.0, "length": 887, "protein_name": "Junctophilin-3 isoform X1", "gene_name": "jph3a", "organism": "Zebrafish", "refseq_name": "junctophilin-3 isoform X1", "refseq_ac": [ { "id": "XP_693582", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_693582", "type": "external" } ], "gene_names_uniprotkb": "jph3a", "gene_names_refseq": "jph3a", "protein_names_uniprotkb": "Junctophilin-3 isoform X1", "protein_names_refseq": "junctophilin-3 isoform X1", "tax_id": 7955, "disease": "Huntington's disease-like 2 (Disease Ontology:DOID:0090104)", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133182) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 9, 2008 this sequence version replaced XP_693582.2. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0A8N7T7Q7", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005886 plasma membrane;GO:0005789 endoplasmic reticulum membrane;GO:0030314 junctional membrane complex", "go_biological_process": "GO:0048167 regulation of synaptic plasticity", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7F2R3-1", "record_type": "protein", "filter_code": "0000000.0000010.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F2R8-1", "uniprot_id": [ { "id": "E7F2R8_DANRE", "url": "https://www.uniprot.org/uniprot/E7F2R8", "type": "external" } ], "mass": 21015.0, "length": 189, "protein_name": "Apolipoprotein D", "gene_name": "apoda.2", "organism": "Zebrafish", "refseq_name": "apolipoprotein Da, duplicate 2 precursor", "refseq_ac": [ { "id": "NP_001188277", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001188277", "type": "external" } ], "gene_names_uniprotkb": "apoda.2; si:dkey-52k20.7", "gene_names_refseq": "apoda.2; si:dkey-52k20.7", "protein_names_uniprotkb": "Apolipoprotein D", "protein_names_refseq": "apolipoprotein D-like; apolipoprotein Da, duplicate 2 precursor", "tax_id": 7955, "disease": "stroke (Disease Ontology:DOID:0051061); Alzheimer's disease (Disease Ontology:DOID:10652); gestational diabetes (Disease Ontology:DOID:11714); status epilepticus (Disease Ontology:DOID:1824); vasculogenic impotence (Disease Ontology:DOID:4762); type 2 diabetes mellitus (Disease Ontology:DOID:9352); obesity (Disease Ontology:DOID:9970)", "pathway": "", "pathway_count": 0, "publication_count": 6, "publication_id_list": "22273551;22297719;26469318;27189481;31075101;33725575", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC142814.1, BC110437.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN18715719 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from EH543264.1, EH539771.1 and DY569710.1. Transcript Variant: This variant (1) represents the longest transcript. Variants 1, 2, 3, and 4 encode the same protein., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 7, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1P3E0;A0AC58GAP7;A0AC58GAS0", "ec_number_list": [], "go_molecular_function": "GO:0008289 lipid binding", "go_cellular_component": "GO:0005576 extracellular region;GO:0005737 cytoplasm", "go_biological_process": "GO:0006629 lipid metabolic process;GO:0006869 lipid transport;GO:0007420 brain development;GO:0000302 response to reactive oxygen species;GO:0042246 tissue regeneration", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "E7F2R8-1", "record_type": "protein", "filter_code": "0000000.0000110.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F2S0-1", "uniprot_id": [ { "id": "E7F2S0_DANRE", "url": "https://www.uniprot.org/uniprot/E7F2S0", "type": "external" } ], "mass": 29626.0, "length": 269, "protein_name": "Regulating synaptic membrane exocytosis protein 4", "gene_name": "rims4", "organism": "Zebrafish", "refseq_name": "regulating synaptic membrane exocytosis protein 4", "refseq_ac": [ { "id": "XP_699547", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_699547", "type": "external" } ], "gene_names_uniprotkb": "rims4", "gene_names_refseq": "rims4", "protein_names_uniprotkb": "Regulating synaptic membrane exocytosis protein 4", "protein_names_refseq": "regulating synaptic membrane exocytosis protein 4", "tax_id": 7955, "disease": "", "pathway": " (dre:570923)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133181) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Mar 23, 2011 this sequence version replaced XP_699547.3. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8N7TBZ5", "ec_number_list": [], "go_molecular_function": "GO:0031267 small GTPase binding", "go_cellular_component": "GO:0016020 membrane;GO:0045202 synapse", "go_biological_process": "GO:0006887 exocytosis", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7F2S0-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F2S6-1", "uniprot_id": [ { "id": "E7F2S6_DANRE", "url": "https://www.uniprot.org/uniprot/E7F2S6", "type": "external" } ], "mass": 52065.0, "length": 462, "protein_name": "Proteinase-activated receptor 1", "gene_name": "si:dkey-163m14.2", "organism": "Zebrafish", "refseq_name": "proteinase-activated receptor 1", "refseq_ac": [ { "id": "XP_001339477", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_001339477", "type": "external" } ], "gene_names_uniprotkb": "si:dkey-163m14.2", "gene_names_refseq": "si:dkey-163m14.2", "protein_names_uniprotkb": "Proteinase-activated receptor 1; Thrombin receptor", "protein_names_refseq": "proteinase-activated receptor 1", "tax_id": 7955, "disease": "", "pathway": " (dre:799082)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133196) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Aug 1, 2013 this sequence version replaced XP_001339477.4. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1PUR2", "ec_number_list": [], "go_molecular_function": "GO:0015057 thrombin-activated receptor activity", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "GO:0007596 blood coagulation;GO:0007200 phospholipase C-activating G protein-coupled receptor signaling pathway;GO:0030194 positive regulation of blood coagulation", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7F2S6-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F340-1", "uniprot_id": [ { "id": "E7F340_DANRE", "url": "https://www.uniprot.org/uniprot/E7F340", "type": "external" } ], "mass": 51903.0, "length": 463, "protein_name": "Thiamine transporter 1", "gene_name": "slc19a2", "organism": "Zebrafish", "refseq_name": "thiamine transporter 1", "refseq_ac": [ { "id": "XP_005168792", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005168792", "type": "external" } ], "gene_names_uniprotkb": "slc19a2", "gene_names_refseq": "slc19a2", "protein_names_uniprotkb": "Thiamine transporter 1", "protein_names_refseq": "thiamine transporter 1", "tax_id": 7955, "disease": "thiamine-responsive megaloblastic anemia syndrome (Disease Ontology:DOID:0090117); megaloblastic anemia (Disease Ontology:DOID:13382); diabetes mellitus (Disease Ontology:DOID:9351)", "pathway": " (dre:569085); (R-DRE-196819)", "pathway_count": 2, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133181) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 3, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M2BG00", "ec_number_list": [], "go_molecular_function": "GO:0090482 vitamin transmembrane transporter activity", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7F340-1", "record_type": "protein", "filter_code": "0000000.0000011.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F354-1", "uniprot_id": [ { "id": "E7F354_DANRE", "url": "https://www.uniprot.org/uniprot/E7F354", "type": "external" } ], "mass": 28308.0, "length": 247, "protein_name": "14-3-3 protein gamma-1", "gene_name": "ywhag2", "organism": "Zebrafish", "refseq_name": "14-3-3 protein gamma-1", "refseq_ac": [ { "id": "XP_689050", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_689050", "type": "external" } ], "gene_names_uniprotkb": "ywhag2", "gene_names_refseq": "ywhag2", "protein_names_uniprotkb": "14-3-3 protein gamma-1", "protein_names_refseq": "14-3-3 protein gamma-1", "tax_id": 7955, "disease": "developmental and epileptic encephalopathy 56 (Disease Ontology:DOID:0080282); intellectual disability (Disease Ontology:DOID:1059); Creutzfeldt-Jakob disease (Disease Ontology:DOID:11949)", "pathway": " (dre:560560); (R-DRE-111447); (R-DRE-380320); (R-DRE-5625740); (R-DRE-5628897); (R-DRE-75035); (R-DRE-9614399); (R-DRE-9929491)", "pathway_count": 8, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133190) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Feb 15, 2007 this sequence version replaced XP_689050.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 3, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M9PNI4", "ec_number_list": [], "go_molecular_function": "GO:0005080 protein kinase C binding", "go_cellular_component": "GO:0005737 cytoplasm", "go_biological_process": "GO:0007165 signal transduction;GO:0008104 intracellular protein localization", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7F354-1", "record_type": "protein", "filter_code": "0000000.0000011.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F359-1", "uniprot_id": [ { "id": "E7F359_DANRE", "url": "https://www.uniprot.org/uniprot/E7F359", "type": "external" } ], "mass": 40582.0, "length": 363, "protein_name": "Dopamine D1 receptor", "gene_name": "drd1a", "organism": "Zebrafish", "refseq_name": "D(1) dopamine receptor", "refseq_ac": [ { "id": "XP_021336831", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021336831", "type": "external" } ], "gene_names_uniprotkb": "drd1a", "gene_names_refseq": "drd1a", "protein_names_uniprotkb": "Dopamine D1 receptor", "protein_names_refseq": "D(1) dopamine receptor", "tax_id": 7955, "disease": "Alzheimer's disease (Disease Ontology:DOID:10652); kidney failure (Disease Ontology:DOID:1074); hypertension (Disease Ontology:DOID:10763); alcohol use disorder (Disease Ontology:DOID:1574); depressive disorder (Disease Ontology:DOID:1596)", "pathway": " (dre:792634); (R-DRE-390651)", "pathway_count": 2, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133189) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 5, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M6Z261", "ec_number_list": [], "go_molecular_function": "GO:0004930 G protein-coupled receptor activity;GO:0004938 alpha2-adrenergic receptor activity;GO:0001588 dopamine neurotransmitter receptor activity, coupled via Gs", "go_cellular_component": "GO:0005886 plasma membrane;GO:0045202 synapse;GO:0060170 ciliary membrane", "go_biological_process": "GO:0043410 positive regulation of MAPK cascade;GO:0071880 adenylate cyclase-activating adrenergic receptor signaling pathway;GO:0007212 G protein-coupled dopamine receptor signaling pathway;GO:0071881 adenylate cyclase-inhibiting adrenergic receptor signaling pathway", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7F359-1", "record_type": "protein", "filter_code": "0000000.0000011.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F362-1", "uniprot_id": [ { "id": "E7F362_DANRE", "url": "https://www.uniprot.org/uniprot/E7F362", "type": "external" } ], "mass": 73187.0, "length": 646, "protein_name": "Epidermal growth factor receptor kinase substrate 8-like protein 3", "gene_name": "eps8l3a", "organism": "Zebrafish", "refseq_name": "epidermal growth factor receptor kinase substrate 8-like protein 3", "refseq_ac": [ { "id": "XP_002666161", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_002666161", "type": "external" } ], "gene_names_uniprotkb": "eps8l3a", "gene_names_refseq": "eps8l3a", "protein_names_uniprotkb": "Epidermal growth factor receptor kinase substrate 8-like protein 3", "protein_names_refseq": "epidermal growth factor receptor kinase substrate 8-like protein 3", "tax_id": 7955, "disease": "hypotrichosis 5 (Disease Ontology:DOID:0110702)", "pathway": " (dre:100334248)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133197) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1RMN2", "ec_number_list": [], "go_molecular_function": "GO:0003779 actin binding", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005886 plasma membrane;GO:0032587 ruffle membrane", "go_biological_process": "GO:0007266 Rho protein signal transduction;GO:0035023 regulation of Rho protein signal transduction;GO:1900029 positive regulation of ruffle assembly", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7F362-1", "record_type": "protein", "filter_code": "0000000.0000011.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F363-1", "uniprot_id": [ { "id": "E7F363_DANRE", "url": "https://www.uniprot.org/uniprot/E7F363", "type": "external" } ], "mass": 49060.0, "length": 445, "protein_name": "Riboflavin transporter", "gene_name": "slc52a3-2a", "organism": "Zebrafish", "refseq_name": "riboflavin transporter 2 isoform X1", "refseq_ac": [ { "id": "XP_683290", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_683290", "type": "external" } ], "gene_names_uniprotkb": "slc52a3-2a", "gene_names_refseq": "slc52a3-2a", "protein_names_uniprotkb": "Riboflavin transporter", "protein_names_refseq": "riboflavin transporter 2 isoform X1", "tax_id": 7955, "disease": "Brown-Vialetto-Van Laere syndrome (Disease Ontology:DOID:0050694)", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133194) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Aug 1, 2013 this sequence version replaced XP_683290.2. COMPLETENESS: full length., [RefSeq]; Plasma membrane transporter mediating the uptake by cells of the water soluble vitamin B2/riboflavin that plays a key role in biochemical oxidation-reduction reactions of the carbohydrate, lipid, and amino acid metabolism., [UniProtKB, UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8N7T6C2;A0AC58I0K3", "ec_number_list": [], "go_molecular_function": "GO:0032217 riboflavin transmembrane transporter activity", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "GO:0032218 riboflavin transport", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7F363-1", "record_type": "protein", "filter_code": "0000000.0000010.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F380-1", "uniprot_id": [ { "id": "E7F380_DANRE", "url": "https://www.uniprot.org/uniprot/E7F380", "type": "external" } ], "mass": 49242.0, "length": 429, "protein_name": "Galactose-3-O-sulfotransferase 3", "gene_name": "gal3st3", "organism": "Zebrafish", "refseq_name": "galactose-3-O-sulfotransferase 3", "refseq_ac": [ { "id": "XP_017212448", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_017212448", "type": "external" } ], "gene_names_uniprotkb": "gal3st3", "gene_names_refseq": "gal3st3", "protein_names_uniprotkb": "Galactose-3-O-sulfotransferase 3", "protein_names_refseq": "galactose-3-O-sulfotransferase 3", "tax_id": 7955, "disease": "", "pathway": " (dre:100330824)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133182) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M6YZA8;A0AC58G312;A0AC58G322", "ec_number_list": [], "go_molecular_function": "GO:0050694 galactose 3-O-sulfotransferase activity;GO:0001733 galactosylceramide sulfotransferase activity", "go_cellular_component": "GO:0000139 Golgi membrane", "go_biological_process": "GO:0009247 glycolipid biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7F380-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F398-1", "uniprot_id": [ { "id": "E7F398_DANRE", "url": "https://www.uniprot.org/uniprot/E7F398", "type": "external" } ], "mass": 44476.0, "length": 386, "protein_name": "Uncharacterized protein LOC562114", "gene_name": "si:ch211-253b8.2", "organism": "Zebrafish", "refseq_name": "uncharacterized protein LOC562114", "refseq_ac": [ { "id": "NP_001188489", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001188489", "type": "external" } ], "gene_names_uniprotkb": "si:ch211-253b8.2; fd44f01; wu:fd44f01", "gene_names_refseq": "fd44f01; si:ch211-253b8.2; wu:fd44f01", "protein_names_uniprotkb": "Uncharacterized protein LOC562114", "protein_names_refseq": "uncharacterized protein LOC562114", "tax_id": 7955, "disease": "", "pathway": " (dre:562114)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "26469318;36452329", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GDQH01001868.1, SRR26395063.228787.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505390, SAMEA4476731 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000011.1, EH548984.1, EH564269.1 and EH570105.1. On Jan 28, 2011 this sequence version replaced XP_690603.3., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1P3I7", "ec_number_list": [], "go_molecular_function": "GO:0008270 zinc ion binding;GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006357 regulation of transcription by RNA polymerase II", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "E7F398-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F3B5-1", "uniprot_id": [ { "id": "E7F3B5_DANRE", "url": "https://www.uniprot.org/uniprot/E7F3B5", "type": "external" } ], "mass": 47004.0, "length": 410, "protein_name": "type I protein arginine methyltransferase", "gene_name": "LOC556054", "organism": "Zebrafish", "refseq_name": "protein arginine N-methyltransferase 8-B", "refseq_ac": [ { "id": "XP_003200481", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003200481", "type": "external" } ], "gene_names_uniprotkb": "LOC556054", "gene_names_refseq": "LOC556054", "protein_names_uniprotkb": "type I protein arginine methyltransferase; 2.1.1.319", "protein_names_refseq": "protein arginine N-methyltransferase 8-B", "tax_id": 7955, "disease": "", "pathway": " (dre:556054)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133193) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1RMP7", "ec_number_list": [ { "id": "2.1.1.319", "url": "https://www.rhea-db.org/rhea/?query=ec:2.1.1.319", "type": "external" }, { "id": "2.1.1.321", "url": "https://www.rhea-db.org/rhea/?query=ec:2.1.1.321", "type": "external" } ], "go_molecular_function": "GO:0035242 protein-arginine omega-N asymmetric methyltransferase activity;GO:0042054 histone methyltransferase activity;GO:0035241 protein-arginine omega-N monomethyltransferase activity", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "GO:0006338 chromatin remodeling;GO:0006355 regulation of DNA-templated transcription;GO:0032259 methylation", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7F3B5-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F3D6-1", "uniprot_id": [ { "id": "E7F3D6_DANRE", "url": "https://www.uniprot.org/uniprot/E7F3D6", "type": "external" } ], "mass": 94247.0, "length": 855, "protein_name": "N-terminal kinase-like protein", "gene_name": "scyl1", "organism": "Zebrafish", "refseq_name": "N-terminal kinase-like protein", "refseq_ac": [ { "id": "XP_001332508", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_001332508", "type": "external" } ], "gene_names_uniprotkb": "scyl1", "gene_names_refseq": "scyl1", "protein_names_uniprotkb": "N-terminal kinase-like protein; SCY1-like protein 1", "protein_names_refseq": "N-terminal kinase-like protein", "tax_id": 7955, "disease": "hereditary ataxia (Disease Ontology:DOID:0050951); autosomal recessive spinocerebellar ataxia 21 (Disease Ontology:DOID:0111155)", "pathway": " (dre:793792)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133189) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]; Regulates COPI-mediated retrograde protein traffic at the interface between the Golgi apparatus and the endoplasmic reticulum. Involved in the maintenance of the Golgi apparatus morphology., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 2, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1Q6V7", "ec_number_list": [], "go_molecular_function": "GO:0004672 protein kinase activity;GO:0005524 ATP binding", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7F3D6-1", "record_type": "protein", "filter_code": "0000000.0000011.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F3G8-1", "uniprot_id": [ { "id": "E7F3G8_DANRE", "url": "https://www.uniprot.org/uniprot/E7F3G8", "type": "external" } ], "mass": 65992.0, "length": 573, "protein_name": "Sterol 26-hydroxylase, mitochondrial", "gene_name": "cyp27a2", "organism": "Zebrafish", "refseq_name": "sterol 26-hydroxylase, mitochondrial", "refseq_ac": [ { "id": "XP_686522", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_686522", "type": "external" } ], "gene_names_uniprotkb": "cyp27a2", "gene_names_refseq": "cyp27a2", "protein_names_uniprotkb": "Sterol 26-hydroxylase, mitochondrial", "protein_names_refseq": "sterol 26-hydroxylase, mitochondrial", "tax_id": 7955, "disease": "", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133181) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Aug 1, 2013 this sequence version replaced XP_686522.3. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8N7USW5;A0AC58JTG1", "ec_number_list": [], "go_molecular_function": "GO:0031073 cholesterol 26-hydroxylase activity;GO:0005506 iron ion binding;GO:0020037 heme binding;GO:0030343 vitamin D3 25-hydroxylase activity", "go_cellular_component": "GO:0005739 mitochondrion", "go_biological_process": "GO:0008203 cholesterol metabolic process;GO:0036378 calcitriol biosynthetic process from calciol", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7F3G8-1", "record_type": "protein", "filter_code": "0000000.0000000.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F3I2-1", "uniprot_id": [ { "id": "E7F3I2_DANRE", "url": "https://www.uniprot.org/uniprot/E7F3I2", "type": "external" } ], "mass": 62335.0, "length": 558, "protein_name": "Prosaposin receptor GPR37", "gene_name": "gpr37a", "organism": "Zebrafish", "refseq_name": "prosaposin receptor GPR37", "refseq_ac": [ { "id": "XP_003201499", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003201499", "type": "external" } ], "gene_names_uniprotkb": "gpr37a", "gene_names_refseq": "gpr37a", "protein_names_uniprotkb": "Prosaposin receptor GPR37", "protein_names_refseq": "prosaposin receptor GPR37", "tax_id": 7955, "disease": "Lewy body dementia (Disease Ontology:DOID:12217); Parkinson's disease (Disease Ontology:DOID:14330)", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133200) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Aug 1, 2013 this sequence version replaced XP_003201499.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 2, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1RFY4;A0AC58IYP8", "ec_number_list": [], "go_molecular_function": "GO:0036505 prosaposin receptor activity;GO:0008528 G protein-coupled peptide receptor activity", "go_cellular_component": "GO:0005886 plasma membrane;GO:0043235 receptor complex;GO:0042995 cell projection", "go_biological_process": "GO:0007193 adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway;GO:0043410 positive regulation of MAPK cascade", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7F3I2-1", "record_type": "protein", "filter_code": "0000000.0000010.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F3J0-1", "uniprot_id": [ { "id": "E7F3J0_DANRE", "url": "https://www.uniprot.org/uniprot/E7F3J0", "type": "external" } ], "mass": 88792.0, "length": 803, "protein_name": "Neurabin-2", "gene_name": "ppp1r9ba", "organism": "Zebrafish", "refseq_name": "neurabin-2", "refseq_ac": [ { "id": "XP_021329200", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021329200", "type": "external" } ], "gene_names_uniprotkb": "ppp1r9ba", "gene_names_refseq": "ppp1r9ba", "protein_names_uniprotkb": "Neurabin-2", "protein_names_refseq": "neurabin-2", "tax_id": 7955, "disease": "Alzheimer's disease (Disease Ontology:DOID:10652); Parkinson's disease (Disease Ontology:DOID:14330); schizophrenia (Disease Ontology:DOID:5419); hepatocellular carcinoma (Disease Ontology:DOID:684)", "pathway": " (dre:558232)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133178) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 4, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M9Q7J0;A0AC58J1U2;X1WI02", "ec_number_list": [], "go_molecular_function": "GO:0051015 actin filament binding", "go_cellular_component": "GO:0005737 cytoplasm;GO:0014069 postsynaptic density;GO:0015629 actin cytoskeleton;GO:0030425 dendrite", "go_biological_process": "GO:0007015 actin filament organization;GO:0019722 calcium-mediated signaling;GO:0031175 neuron projection development", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7F3J0-1", "record_type": "protein", "filter_code": "0000000.0000011.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F3K7-1", "uniprot_id": [ { "id": "E7F3K7_DANRE", "url": "https://www.uniprot.org/uniprot/E7F3K7", "type": "external" } ], "mass": 71397.0, "length": 631, "protein_name": "FAST kinase domain-containing protein 4", "gene_name": "tbrg4", "organism": "Zebrafish", "refseq_name": "FAST kinase domain-containing protein 4 isoform X1", "refseq_ac": [ { "id": "XP_690863", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_690863", "type": "external" } ], "gene_names_uniprotkb": "tbrg4", "gene_names_refseq": "tbrg4", "protein_names_uniprotkb": "FAST kinase domain-containing protein 4; Protein TBRG4; Transforming growth factor beta regulator 4", "protein_names_refseq": "FAST kinase domain-containing protein 4 isoform X1", "tax_id": 7955, "disease": "", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133191) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Mar 23, 2011 this sequence version replaced XP_690863.3. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8N7UVV2", "ec_number_list": [], "go_molecular_function": "GO:0003723 RNA binding;GO:0016301 kinase activity", "go_cellular_component": "GO:0005759 mitochondrial matrix;GO:0035770 ribonucleoprotein granule", "go_biological_process": "GO:0000963 mitochondrial RNA processing;GO:0044528 regulation of mitochondrial mRNA stability", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7F3K7-1", "record_type": "protein", "filter_code": "0000000.0000000.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F3U3-1", "uniprot_id": [ { "id": "E7F3U3_DANRE", "url": "https://www.uniprot.org/uniprot/E7F3U3", "type": "external" } ], "mass": 46897.0, "length": 405, "protein_name": "Protein-serine/threonine kinase", "gene_name": "pdk1", "organism": "Zebrafish", "refseq_name": "pyruvate dehydrogenase (acetyl-transferring) kinase isozyme 1, mitochondrial", "refseq_ac": [ { "id": "XP_683576", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_683576", "type": "external" } ], "gene_names_uniprotkb": "pdk1", "gene_names_refseq": "pdk1", "protein_names_uniprotkb": "Protein-serine/threonine kinase; 2.7.11.-", "protein_names_refseq": "pyruvate dehydrogenase (acetyl-transferring) kinase isozyme 1, mitochondrial", "tax_id": 7955, "disease": "", "pathway": " (dre:555840); (R-DRE-204174); (R-DRE-5362517); (R-DRE-9837999)", "pathway_count": 4, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133184) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Feb 15, 2007 this sequence version replaced XP_683576.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8N7UUX2", "ec_number_list": [ { "id": "5.6.2.3", "url": "https://www.rhea-db.org/rhea/?query=ec:5.6.2.3", "type": "external" }, { "id": "3.4.21.53", "url": "https://www.rhea-db.org/rhea/?query=ec:3.4.21.53", "type": "external" }, { "id": "2.7.11.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.-", "type": "external" }, { "id": "1.2.4.1", "url": "https://www.rhea-db.org/rhea/?query=ec:1.2.4.1", "type": "external" }, { "id": "1.2.4.2", "url": "https://www.rhea-db.org/rhea/?query=ec:1.2.4.2", "type": "external" }, { "id": "3.6.4.10", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.4.10", "type": "external" }, { "id": "1.3.8.1", "url": "https://www.rhea-db.org/rhea/?query=ec:1.3.8.1", "type": "external" }, { "id": "1.3.8.5", "url": "https://www.rhea-db.org/rhea/?query=ec:1.3.8.5", "type": "external" }, { "id": "2.3.1.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.1.-", "type": "external" }, { "id": "2.3.1.9", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.1.9", "type": "external" }, { "id": "4.2.1.2", "url": "https://www.rhea-db.org/rhea/?query=ec:4.2.1.2", "type": "external" }, { "id": "2.3.3.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.3.1", "type": "external" } ], "go_molecular_function": "GO:0004740 pyruvate dehydrogenase (acetyl-transferring) kinase activity;GO:0005524 ATP binding", "go_cellular_component": "GO:0005739 mitochondrion;GO:0005759 mitochondrial matrix", "go_biological_process": "GO:0010906 regulation of glucose metabolic process;GO:0010510 regulation of pyruvate decarboxylation to acetyl-CoA", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7F3U3-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F3X3-1", "uniprot_id": [ { "id": "E7F3X3_DANRE", "url": "https://www.uniprot.org/uniprot/E7F3X3", "type": "external" } ], "mass": 45606.0, "length": 399, "protein_name": "Sulfotransferase", "gene_name": "si:ch211-216b21.2", "organism": "Zebrafish", "refseq_name": "heparan sulfate glucosamine 3-O-sulfotransferase 3A1 isoform X1", "refseq_ac": [ { "id": "XP_002664054", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_002664054", "type": "external" } ], "gene_names_uniprotkb": "si:ch211-216b21.2", "gene_names_refseq": "si:ch211-216b21.2", "protein_names_uniprotkb": "Sulfotransferase; 2.8.2.-", "protein_names_refseq": "heparan sulfate glucosamine 3-O-sulfotransferase 3A1 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:100329339); (R-DRE-2022928)", "pathway_count": 2, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133187) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Aug 1, 2013 this sequence version replaced XP_002664054.2. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1RM64", "ec_number_list": [ { "id": "2.8.2.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.8.2.-", "type": "external" } ], "go_molecular_function": "GO:0008467 [heparan sulfate]-glucosamine 3-sulfotransferase activity", "go_cellular_component": "GO:0000139 Golgi membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7F3X3-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F404-1", "uniprot_id": [ { "id": "E7F404_DANRE", "url": "https://www.uniprot.org/uniprot/E7F404", "type": "external" } ], "mass": 14821.0, "length": 134, "protein_name": "Osteocrin isoform X1; Osteocrin precursor", "gene_name": "ostn", "organism": "Zebrafish", "refseq_name": "osteocrin precursor", "refseq_ac": [ { "id": "NP_001313338", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001313338", "type": "external" } ], "gene_names_uniprotkb": "ostn", "gene_names_refseq": "ostn", "protein_names_uniprotkb": "Osteocrin isoform X1; Osteocrin precursor", "protein_names_refseq": "osteocrin precursor", "tax_id": 7955, "disease": "", "pathway": " (dre:100333936)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "27189481;27993976", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: EH582792.1, SRR32588723.3746395.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505385, SAMEA4476748 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000015.1. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments., [RefSeq]; Ostn secreted from the heart contributes to bone formation as an endocrine hormone., [RefSeq, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1P2M4", "ec_number_list": [], "go_molecular_function": "GO:0005102 signaling receptor binding", "go_cellular_component": "GO:0005615 extracellular space", "go_biological_process": "GO:0009755 hormone-mediated signaling pathway;GO:0051216 cartilage development;GO:0001958 endochondral ossification", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "E7F404-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F422-1", "uniprot_id": [ { "id": "E7F422_DANRE", "url": "https://www.uniprot.org/uniprot/E7F422", "type": "external" } ], "mass": 8059.0, "length": 73, "protein_name": "Musculoskeletal embryonic nuclear protein 1", "gene_name": "mustn1a", "organism": "Zebrafish", "refseq_name": "musculoskeletal embryonic nuclear protein 1a", "refseq_ac": [ { "id": "NP_001313373", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001313373", "type": "external" } ], "gene_names_uniprotkb": "mustn1a", "gene_names_refseq": "mustn1a", "protein_names_uniprotkb": "Musculoskeletal embryonic nuclear protein 1", "protein_names_refseq": "musculoskeletal embryonic nuclear protein 1a", "tax_id": 7955, "disease": "", "pathway": " (dre:559807)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "25139857;26748692;27189481;27565701;32977147;34589480;37009414", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: CO356168.1, EX154453.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA4476755, SAMEA4476791 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000006.1, EH440909.1 and EH439445.1. On May 18, 2016 this sequence version replaced XP_688271.2. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments., [RefSeq]; Phylogenetic analysis further confirmed that the Mustn1a and 1b predicted proteins were highly related to other vertebrate members of the Mustn1 protein family. Whole mount in situ hybridization revealed expression of both mustn1a and 1b at the 7-somite stage through 72hpf in structures such as Kupffer's vesicle, segmental mesoderm, head structures, and otic vesicle., [RefSeq, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1P902", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0060271 cilium assembly;GO:0042246 tissue regeneration;GO:0002062 chondrocyte differentiation;GO:0035988 chondrocyte proliferation;GO:0044782 cilium organization", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "E7F422-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F457-1", "uniprot_id": [ { "id": "E7F457_DANRE", "url": "https://www.uniprot.org/uniprot/E7F457", "type": "external" } ], "mass": 102914.0, "length": 926, "protein_name": "DNA cross-link repair 1A protein", "gene_name": "dclre1a", "organism": "Zebrafish", "refseq_name": "DNA cross-link repair 1A protein", "refseq_ac": [ { "id": "NP_001018385", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001018385", "type": "external" } ], "gene_names_uniprotkb": "dclre1a; fc49f05; im:7145629; wu:fc49f05; zgc:109999", "gene_names_refseq": "dclre1a; fc49f05; im:7145629; wu:fc49f05; zgc:109999", "protein_names_uniprotkb": "DNA cross-link repair 1A protein; 3.5.2.6; SNM1 homolog A", "protein_names_refseq": "DNA cross-link repair 1A protein", "tax_id": 7955, "disease": "", "pathway": " (R-DRE-6783310)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "16109975;29920365", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GDQH01027250.1, SRR32588724.2075979.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505377, SAMEA3505381 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000012.1. On Jun 25, 2025 this sequence version replaced NP_001018385.4. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1N609", "ec_number_list": [ { "id": "3.1.-.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.-.-", "type": "external" }, { "id": "3.5.2.6", "url": "https://www.rhea-db.org/rhea/?query=ec:3.5.2.6", "type": "external" }, { "id": "3.4.13.19", "url": "https://www.rhea-db.org/rhea/?query=ec:3.4.13.19", "type": "external" }, { "id": "3.1.21.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.21.-", "type": "external" }, { "id": "3.1.4.1", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.4.1", "type": "external" }, { "id": "3.1.22.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.22.-", "type": "external" } ], "go_molecular_function": "GO:0008270 zinc ion binding;GO:0003684 damaged DNA binding;GO:0035312 5'-3' DNA exonuclease activity;GO:0008800 beta-lactamase activity", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006303 double-strand break repair via nonhomologous end joining;GO:0036297 interstrand cross-link repair", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "E7F457-1", "record_type": "protein", "filter_code": "0000000.0000101.010000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F462-1", "uniprot_id": [ { "id": "E7F462_DANRE", "url": "https://www.uniprot.org/uniprot/E7F462", "type": "external" } ], "mass": 7956.0, "length": 77, "protein_name": "cAMP-dependent protein kinase inhibitor gamma", "gene_name": "pkig", "organism": "Zebrafish", "refseq_name": "cAMP-dependent protein kinase inhibitor gamma", "refseq_ac": [ { "id": "NP_001159628", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001159628", "type": "external" } ], "gene_names_uniprotkb": "pkig; wu:fl39e07", "gene_names_refseq": "pkig; wu:fl39e07", "protein_names_uniprotkb": "cAMP-dependent protein kinase inhibitor gamma", "protein_names_refseq": "cAMP-dependent protein kinase inhibitor gamma", "tax_id": 7955, "disease": "", "pathway": " (dre:503808)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "16109975;26469318", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC129461.1, GDQH01017593.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000023.1 and EH550275.1. Transcript Variant: This variant (1) represents the longest transcript. Variants 1 and 2 encode the same protein. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments., [RefSeq]; Extremely potent competitive inhibitor of cAMP-dependent protein kinase activity, this protein interacts with the catalytic subunit of the enzyme after the cAMP-induced dissociation of its regulatory chains., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NSV2;A0AC58IJM8;A0AC58IJP7;A0AC58IJQ2", "ec_number_list": [], "go_molecular_function": "GO:0004862 cAMP-dependent protein kinase inhibitor activity;GO:0004860 protein kinase inhibitor activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "E7F462-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F4B0-1", "uniprot_id": [ { "id": "E7F4B0_DANRE", "url": "https://www.uniprot.org/uniprot/E7F4B0", "type": "external" } ], "mass": 53035.0, "length": 465, "protein_name": "Tumor protein p53-inducible protein 13 isoform X1", "gene_name": "tp53i13", "organism": "Zebrafish", "refseq_name": "tumor protein p53-inducible protein 13 isoform X1", "refseq_ac": [ { "id": "XP_001338803", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_001338803", "type": "external" } ], "gene_names_uniprotkb": "tp53i13", "gene_names_refseq": "tp53i13", "protein_names_uniprotkb": "Tumor protein p53-inducible protein 13 isoform X1", "protein_names_refseq": "tumor protein p53-inducible protein 13 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:100002736)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133190) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Mar 23, 2011 this sequence version replaced XP_001338803.2. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1PSB0", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005737 cytoplasm", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7F4B0-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F4C0-1", "uniprot_id": [ { "id": "E7F4C0_DANRE", "url": "https://www.uniprot.org/uniprot/E7F4C0", "type": "external" } ], "mass": 122658.0, "length": 1104, "protein_name": "ubiquitinyl hydrolase 1", "gene_name": "usp36", "organism": "Zebrafish", "refseq_name": "ubiquitin carboxyl-terminal hydrolase 36", "refseq_ac": [ { "id": "NP_001292509", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001292509", "type": "external" } ], "gene_names_uniprotkb": "usp36; usp37; wu:fd19b04", "gene_names_refseq": "usp36; usp37; wu:fd19b04", "protein_names_uniprotkb": "ubiquitinyl hydrolase 1; 3.4.19.12", "protein_names_refseq": "ubiquitin carboxyl-terminal hydrolase 36", "tax_id": 7955, "disease": "", "pathway": " (dre:327239)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "20040115;22412924;24683187;26469318;28450118", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GDQQ01009752.1, GDQH01004597.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000003.1. On Mar 19, 2015 this sequence version replaced XP_688241.3. Sequence Note: This RefSeq record was created from genomic sequence data because no single transcript from the same strain was available for the full length of the gene. The extent of this transcript is supported by transcript alignments., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1P6D7", "ec_number_list": [], "go_molecular_function": "GO:0004843 cysteine-type deubiquitinase activity;GO:0016787 hydrolase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005829 cytosol", "go_biological_process": "GO:1904888 cranial skeletal system development;GO:0006508 proteolysis;GO:0016579 protein deubiquitination;GO:0031647 regulation of protein stability;GO:0042981 regulation of apoptotic process", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "E7F4C0-1", "record_type": "protein", "filter_code": "0000000.0000101.010000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F4K9-1", "uniprot_id": [ { "id": "E7F4K9_DANRE", "url": "https://www.uniprot.org/uniprot/E7F4K9", "type": "external" } ], "mass": 38330.0, "length": 339, "protein_name": "Leukotriene B4 receptor 2b", "gene_name": "ltb4r2b", "organism": "Zebrafish", "refseq_name": "leukotriene B4 receptor 2b", "refseq_ac": [ { "id": "NP_001295899", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001295899", "type": "external" } ], "gene_names_uniprotkb": "ltb4r2b; LTB4R; si:dkeyp-66d1.2", "gene_names_refseq": "LTB4R; ltb4r2b; si:dkeyp-66d1.2", "protein_names_uniprotkb": "Leukotriene B4 receptor 2b", "protein_names_refseq": "BLT2b; leukotriene B4 receptor 1-like; leukotriene B4 receptor 2b", "tax_id": 7955, "disease": "", "pathway": " (dre:100537296); (R-DRE-391906); (R-DRE-416476)", "pathway_count": 3, "publication_count": 3, "publication_id_list": "25738285;27189481;38097183", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GFIL01015533.1, GDQH01032993.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA4476764, SAMEA4476822 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000002.1. On or before Jun 4, 2016 this sequence version replaced XP_003197923.2, NP_001295899.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]; Leukotriene B4 receptor 2 governs macrophage migration during tissue inflammation., [RefSeq, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1P208", "ec_number_list": [], "go_molecular_function": "GO:0004930 G protein-coupled receptor activity;GO:0008528 G protein-coupled peptide receptor activity;GO:0004974 leukotriene receptor activity", "go_cellular_component": "GO:0005886 plasma membrane;GO:0009986 cell surface", "go_biological_process": "GO:0007218 neuropeptide signaling pathway", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "E7F4K9-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F4L4-1", "uniprot_id": [ { "id": "E7F4L4_DANRE", "url": "https://www.uniprot.org/uniprot/E7F4L4", "type": "external" } ], "mass": 135570.0, "length": 1173, "protein_name": "WASH complex subunit 4 isoform X1", "gene_name": "washc4", "organism": "Zebrafish", "refseq_name": "WASH complex subunit 4 isoform X1", "refseq_ac": [ { "id": "XP_694117", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_694117", "type": "external" } ], "gene_names_uniprotkb": "washc4", "gene_names_refseq": "washc4", "protein_names_uniprotkb": "WASH complex subunit 4 isoform X1", "protein_names_refseq": "WASH complex subunit 4 isoform X1", "tax_id": 7955, "disease": "autosomal recessive intellectual developmental disorder 43 (Disease Ontology:DOID:0081207); Wiskott-Aldrich syndrome (Disease Ontology:DOID:9169)", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133200) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 9, 2008 this sequence version replaced XP_694117.2. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 2, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8N7T7K7", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005768 endosome;GO:0071203 WASH complex", "go_biological_process": "GO:0010506 regulation of autophagy;GO:0007032 endosome organization;GO:0016197 endosomal transport", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7F4L4-1", "record_type": "protein", "filter_code": "0000000.0000010.010000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F4N9-1", "uniprot_id": [ { "id": "E7F4N9_DANRE", "url": "https://www.uniprot.org/uniprot/E7F4N9", "type": "external" } ], "mass": 43754.0, "length": 383, "protein_name": "Ubiquitin carboxyl-terminal hydrolase", "gene_name": "usp12b", "organism": "Zebrafish", "refseq_name": "ubiquitin carboxyl-terminal hydrolase 12", "refseq_ac": [ { "id": "XP_688359", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_688359", "type": "external" } ], "gene_names_uniprotkb": "usp12b", "gene_names_refseq": "usp12b", "protein_names_uniprotkb": "Ubiquitin carboxyl-terminal hydrolase; 3.4.19.12", "protein_names_refseq": "ubiquitin carboxyl-terminal hydrolase 12", "tax_id": 7955, "disease": "", "pathway": " (dre:559878)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133182) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 9, 2008 this sequence version replaced XP_688359.2. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8N7TEM7", "ec_number_list": [], "go_molecular_function": "GO:0046872 metal ion binding;GO:0004843 cysteine-type deubiquitinase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005829 cytosol", "go_biological_process": "GO:0006508 proteolysis;GO:0016579 protein deubiquitination;GO:0031647 regulation of protein stability", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7F4N9-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F4P8-1", "uniprot_id": [ { "id": "E7F4P8_DANRE", "url": "https://www.uniprot.org/uniprot/E7F4P8", "type": "external" } ], "mass": 119012.0, "length": 1099, "protein_name": "Insulin receptor substrate 1", "gene_name": "irs1", "organism": "Zebrafish", "refseq_name": "insulin receptor substrate 1", "refseq_ac": [ { "id": "XP_687702", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_687702", "type": "external" } ], "gene_names_uniprotkb": "irs1", "gene_names_refseq": "irs1", "protein_names_uniprotkb": "Insulin receptor substrate 1", "protein_names_refseq": "insulin receptor substrate 1", "tax_id": 7955, "disease": "Alzheimer's disease (Disease Ontology:DOID:10652); uterine fibroid (Disease Ontology:DOID:13223); coronary artery disease (Disease Ontology:DOID:3393); type 2 diabetes mellitus (Disease Ontology:DOID:9352)", "pathway": " (dre:559281); (R-DRE-109704); (R-DRE-112399); (R-DRE-112412); (R-DRE-1257604); (R-DRE-1266695); (R-DRE-198203); (R-DRE-201556); (R-DRE-5673001); (R-DRE-6811558); (R-DRE-74713); (R-DRE-74749); (R-DRE-9842663)", "pathway_count": 13, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133190) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Mar 23, 2011 this sequence version replaced XP_687702.3. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 2, "predicted_n_glycosites": 0, "predicted_o_glycosites": 2, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 4, "glyco_site_count": 2, "binding_glycan_count": 0, "secondary_ac_list": "A0A8N7TDI8", "ec_number_list": [], "go_molecular_function": "GO:0005158 insulin receptor binding;GO:0030159 signaling receptor complex adaptor activity;GO:0043548 phosphatidylinositol 3-kinase binding", "go_cellular_component": "GO:0005829 cytosol;GO:0005886 plasma membrane", "go_biological_process": "GO:0071456 cellular response to hypoxia;GO:0008286 insulin receptor signaling pathway;GO:0009967 positive regulation of signal transduction", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7F4P8-1", "record_type": "protein", "filter_code": "0000000.0000011.010000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F4S3-1", "uniprot_id": [ { "id": "E7F4S3_DANRE", "url": "https://www.uniprot.org/uniprot/E7F4S3", "type": "external" } ], "mass": 53769.0, "length": 467, "protein_name": "Oxysterol-binding protein", "gene_name": "osbpl2a", "organism": "Zebrafish", "refseq_name": "oxysterol-binding protein-related protein 2", "refseq_ac": [ { "id": "XP_005162397", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005162397", "type": "external" } ], "gene_names_uniprotkb": "osbpl2a", "gene_names_refseq": "osbpl2a", "protein_names_uniprotkb": "Oxysterol-binding protein", "protein_names_refseq": "oxysterol-binding protein-related protein 2", "tax_id": 7955, "disease": "autosomal dominant nonsyndromic deafness 67 (Disease Ontology:DOID:0110588)", "pathway": " (dre:557483); (R-DRE-192105)", "pathway_count": 2, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133198) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M2B9J8", "ec_number_list": [], "go_molecular_function": "GO:0015485 cholesterol binding", "go_cellular_component": "GO:0005829 cytosol;GO:0005886 plasma membrane;GO:0097038 perinuclear endoplasmic reticulum", "go_biological_process": "GO:0006869 lipid transport", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7F4S3-1", "record_type": "protein", "filter_code": "0000000.0000011.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F4T6-1", "uniprot_id": [ { "id": "E7F4T6_DANRE", "url": "https://www.uniprot.org/uniprot/E7F4T6", "type": "external" } ], "mass": 27247.0, "length": 238, "protein_name": "Mitochondrial import inner membrane translocase subunit Tim21", "gene_name": "timm21", "organism": "Zebrafish", "refseq_name": "mitochondrial import inner membrane translocase subunit Tim21", "refseq_ac": [ { "id": "NP_001373432", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001373432", "type": "external" } ], "gene_names_uniprotkb": "timm21; si:dkey-118j18.1", "gene_names_refseq": "si:dkey-118j18.1; timm21", "protein_names_uniprotkb": "Mitochondrial import inner membrane translocase subunit Tim21", "protein_names_refseq": "mitochondrial import inner membrane translocase subunit Tim21", "tax_id": 7955, "disease": "", "pathway": " (dre:560369); (R-DRE-9864848)", "pathway_count": 2, "publication_count": 2, "publication_id_list": "27189481;28252024", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GDQQ01023285.1, GFIL01036637.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## ##RefSeq-Attributes-START## gene product(s) localized to mito. :: inferred from homology ##RefSeq-Attributes-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000024.1. On Aug 24, 2020 this sequence version replaced XP_688866.2., [RefSeq]; Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8N7UVT2", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005744 TIM23 mitochondrial import inner membrane translocase complex", "go_biological_process": "GO:0030150 protein import into mitochondrial matrix", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "E7F4T6-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F4W6-1", "uniprot_id": [ { "id": "E7F4W6_DANRE", "url": "https://www.uniprot.org/uniprot/E7F4W6", "type": "external" } ], "mass": 19409.0, "length": 175, "protein_name": "Barttin", "gene_name": "bsnd", "organism": "Zebrafish", "refseq_name": "barttin", "refseq_ac": [ { "id": "NP_001292552", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001292552", "type": "external" } ], "gene_names_uniprotkb": "bsnd; im:7136367; si:dkeyp-51f12.4", "gene_names_refseq": "bsnd; im:7136367; si:dkeyp-51f12.4", "protein_names_uniprotkb": "Barttin", "protein_names_refseq": "Bartter syndrome, infantile, with sensorineural deafness (Barttin); barttin CLCNK-type chloride channel accessory beta subunit; barttin", "tax_id": 7955, "disease": "Bartter disease type 4a (Disease Ontology:DOID:0110145); sensorineural hearing loss (Disease Ontology:DOID:10003); Bartter disease (Disease Ontology:DOID:445)", "pathway": " (dre:497323)", "pathway_count": 1, "publication_count": 3, "publication_id_list": "21262879;28656378;31177533", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC090420.1, EH589098.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505378, SAMEA3505383 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000020.1 and EH589098.1. On Mar 24, 2015 this sequence version replaced XP_003200724.1. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments., [RefSeq]; Role of zebrafish ClC-K/barttin channels in apical kidney chloride reabsorption., [RefSeq, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 3, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1P1C8", "ec_number_list": [], "go_molecular_function": "GO:0017081 chloride channel regulator activity;GO:0015108 chloride transmembrane transporter activity", "go_cellular_component": "GO:0016323 basolateral plasma membrane", "go_biological_process": "GO:0006821 chloride transport", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "E7F4W6-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F4X8-1", "uniprot_id": [ { "id": "E7F4X8_DANRE", "url": "https://www.uniprot.org/uniprot/E7F4X8", "type": "external" } ], "mass": 19477.0, "length": 175, "protein_name": "WW domain binding protein VOPP1", "gene_name": "vopp1b", "organism": "Zebrafish", "refseq_name": "WW domain binding protein VOPP1", "refseq_ac": [ { "id": "XP_005170670", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005170670", "type": "external" } ], "gene_names_uniprotkb": "vopp1b", "gene_names_refseq": "vopp1b", "protein_names_uniprotkb": "WW domain binding protein VOPP1; Vesicular, overexpressed in cancer, prosurvival protein 1", "protein_names_refseq": "WW domain binding protein VOPP1", "tax_id": 7955, "disease": "", "pathway": " (dre:101885019)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133199) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M2BHY0", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005765 lysosomal membrane;GO:0031902 late endosome membrane;GO:0031090 organelle membrane", "go_biological_process": "GO:0006351 DNA-templated transcription", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7F4X8-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F4Y8-1", "uniprot_id": [ { "id": "E7F4Y8_DANRE", "url": "https://www.uniprot.org/uniprot/E7F4Y8", "type": "external" } ], "mass": 44316.0, "length": 393, "protein_name": "Tumor susceptibility gene 101 protein", "gene_name": "tsg101b", "organism": "Zebrafish", "refseq_name": "tumor susceptibility gene 101 protein", "refseq_ac": [ { "id": "XP_002662924", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_002662924", "type": "external" } ], "gene_names_uniprotkb": "tsg101b", "gene_names_refseq": "tsg101b", "protein_names_uniprotkb": "Tumor susceptibility gene 101 protein", "protein_names_refseq": "tumor susceptibility gene 101 protein", "tax_id": 7955, "disease": "prostate cancer (Disease Ontology:DOID:10283); breast cancer (Disease Ontology:DOID:1612); ovarian cancer (Disease Ontology:DOID:2394); endometrial adenocarcinoma (Disease Ontology:DOID:2870); cervix carcinoma (Disease Ontology:DOID:2893); breast carcinoma (Disease Ontology:DOID:3459)", "pathway": " (dre:100333057)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133182) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 6, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1RKB0", "ec_number_list": [], "go_molecular_function": "GO:0043130 ubiquitin binding", "go_cellular_component": "GO:0005634 nucleus;GO:0000813 ESCRT I complex", "go_biological_process": "GO:0015031 protein transport;GO:0006355 regulation of DNA-templated transcription;GO:0008333 endosome to lysosome transport", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7F4Y8-1", "record_type": "protein", "filter_code": "0000000.0000011.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F503-1", "uniprot_id": [ { "id": "E7F503_DANRE", "url": "https://www.uniprot.org/uniprot/E7F503", "type": "external" } ], "mass": 91548.0, "length": 788, "protein_name": "Anoctamin", "gene_name": "ano9b", "organism": "Zebrafish", "refseq_name": "anoctamin-9", "refseq_ac": [ { "id": "XP_001922660", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_001922660", "type": "external" } ], "gene_names_uniprotkb": "ano9b", "gene_names_refseq": "ano9b", "protein_names_uniprotkb": "Anoctamin", "protein_names_refseq": "anoctamin-9", "tax_id": 7955, "disease": "", "pathway": " (dre:559809); (R-DRE-2672351)", "pathway_count": 2, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133182) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Aug 1, 2013 this sequence version replaced XP_001922660.2. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1QR52", "ec_number_list": [], "go_molecular_function": "GO:0017128 phospholipid scramblase activity", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "GO:0061589 calcium activated phosphatidylserine scrambling", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7F503-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F528-1", "uniprot_id": [ { "id": "E7F528_DANRE", "url": "https://www.uniprot.org/uniprot/E7F528", "type": "external" } ], "mass": 55806.0, "length": 499, "protein_name": "Rhotekin 2b", "gene_name": "rtknb", "organism": "Zebrafish", "refseq_name": "rhotekin 2b", "refseq_ac": [ { "id": "NP_001315495", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001315495", "type": "external" } ], "gene_names_uniprotkb": "rtknb; rtkn2b; si:dkey-264m23.3; zgc:101635", "gene_names_refseq": "rtkn2b; rtknb; si:dkey-264m23.3; zgc:101635", "protein_names_uniprotkb": "Rhotekin 2b", "protein_names_refseq": "rhotekin 2b", "tax_id": 7955, "disease": "hepatocellular carcinoma (Disease Ontology:DOID:684)", "pathway": " (dre:447899); (R-DRE-5666185); (R-DRE-8980692); (R-DRE-9013026); (R-DRE-9013106)", "pathway_count": 5, "publication_count": 2, "publication_id_list": "26469318;35991544", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GDQH01027311.1, ERR5059480.2950621.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000021.1, EH585343.1 and EH602772.1. On Jun 18, 2016 this sequence version replaced XP_005161076.1. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. No single transcript was available for the full length of the gene. The extent of this transcript is supported by partial transcript alignments, and RNA-seq and orthologous data., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1PAG5", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005826 actomyosin contractile ring", "go_biological_process": "GO:0007165 signal transduction;GO:0000281 mitotic cytokinesis;GO:0000915 actomyosin contractile ring assembly;GO:0031106 septin ring organization", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "E7F528-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F542-1", "uniprot_id": [ { "id": "E7F542_DANRE", "url": "https://www.uniprot.org/uniprot/E7F542", "type": "external" } ], "mass": 427114.0, "length": 3919, "protein_name": "Uncharacterized protein rp1l1b", "gene_name": "rp1l1b", "organism": "Zebrafish", "refseq_name": "uncharacterized protein rp1l1b", "refseq_ac": [ { "id": "XP_017208190", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_017208190", "type": "external" } ], "gene_names_uniprotkb": "rp1l1b", "gene_names_refseq": "rp1l1b", "protein_names_uniprotkb": "Uncharacterized protein rp1l1b", "protein_names_refseq": "uncharacterized protein rp1l1b", "tax_id": 7955, "disease": "occult macular dystrophy (Disease Ontology:DOID:0050578); retinitis pigmentosa 88 (Disease Ontology:DOID:0112145)", "pathway": " (dre:101885561)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133195) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 2, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M6Z2W2", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005930 axoneme;GO:0032391 photoreceptor connecting cilium", "go_biological_process": "GO:0035556 intracellular signal transduction;GO:0045494 photoreceptor cell maintenance;GO:0060041 retina development in camera-type eye;GO:0035845 photoreceptor cell outer segment organization;GO:0035082 axoneme assembly", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7F542-1", "record_type": "protein", "filter_code": "0000000.0000011.001000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F555-1", "uniprot_id": [ { "id": "IFT43_DANRE", "url": "https://www.uniprot.org/uniprot/E7F555", "type": "external" } ], "mass": 23271.0, "length": 208, "protein_name": "Intraflagellar transport protein 43 homolog", "gene_name": "ift43", "organism": "Zebrafish", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "ift43", "gene_names_refseq": "", "protein_names_uniprotkb": "Intraflagellar transport protein 43 homolog", "protein_names_refseq": "", "tax_id": 7955, "disease": "", "pathway": "", "pathway_count": 0, "publication_count": 1, "publication_id_list": "23594743", "class_list": "", "function": "As a component of IFT complex A (IFT-A), a complex required for retrograde ciliary transport and entry into cilia of G protein-coupled receptors (GPCRs), it is involved in ciliogenesis. Involved in retrograde ciliary transport along microtubules from the ciliary tip to the base., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "E7F0H2", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005856 cytoskeleton;GO:0005929 cilium;GO:0030991 intraciliary transport particle A", "go_biological_process": "GO:0060271 cilium assembly;GO:0035721 intraciliary retrograde transport", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "E7F555-1", "record_type": "protein", "filter_code": "0000000.0000100.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F5J4-1", "uniprot_id": [ { "id": "E7F5J4_DANRE", "url": "https://www.uniprot.org/uniprot/E7F5J4", "type": "external" } ], "mass": 29694.0, "length": 272, "protein_name": "Uncharacterized protein si:ch73-361p23.3 isoform X1", "gene_name": "si:ch73-361p23.3", "organism": "Zebrafish", "refseq_name": "uncharacterized protein si:ch73-361p23.3 isoform X1", "refseq_ac": [ { "id": "XP_002662562", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_002662562", "type": "external" } ], "gene_names_uniprotkb": "si:ch73-361p23.3", "gene_names_refseq": "si:ch73-361p23.3", "protein_names_uniprotkb": "Uncharacterized protein si:ch73-361p23.3 isoform X1", "protein_names_refseq": "uncharacterized protein si:ch73-361p23.3 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:100330352)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133181) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Aug 1, 2013 this sequence version replaced XP_002662562.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1RLV7", "ec_number_list": [], "go_molecular_function": "GO:0038023 signaling receptor activity", "go_cellular_component": "", "go_biological_process": "GO:0042127 regulation of cell population proliferation", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7F5J4-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F5Q0-1", "uniprot_id": [ { "id": "E7F5Q0_DANRE", "url": "https://www.uniprot.org/uniprot/E7F5Q0", "type": "external" } ], "mass": 144400.0, "length": 1290, "protein_name": "VWFA and cache domain-containing protein 1", "gene_name": "cachd1", "organism": "Zebrafish", "refseq_name": "VWFA and cache domain-containing protein 1 isoform X1", "refseq_ac": [ { "id": "XP_001334829", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_001334829", "type": "external" } ], "gene_names_uniprotkb": "cachd1", "gene_names_refseq": "cachd1", "protein_names_uniprotkb": "VWFA and cache domain-containing protein 1", "protein_names_refseq": "VWFA and cache domain-containing protein 1 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:794807)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133181) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Aug 1, 2013 this sequence version replaced XP_001334829.2. COMPLETENESS: full length., [RefSeq]; May regulate voltage-dependent calcium channels., [UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1PS05", "ec_number_list": [], "go_molecular_function": "GO:0005245 voltage-gated calcium channel activity", "go_cellular_component": "GO:0005891 voltage-gated calcium channel complex", "go_biological_process": "GO:0060536 cartilage morphogenesis", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7F5Q0-1", "record_type": "protein", "filter_code": "0000000.0000001.010000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F5T8-1", "uniprot_id": [ { "id": "E7F5T8_DANRE", "url": "https://www.uniprot.org/uniprot/E7F5T8", "type": "external" } ], "mass": 129667.0, "length": 1174, "protein_name": "Protocadherin-12", "gene_name": "pcdh12", "organism": "Zebrafish", "refseq_name": "protocadherin-12", "refseq_ac": [ { "id": "XP_683010", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_683010", "type": "external" } ], "gene_names_uniprotkb": "pcdh12", "gene_names_refseq": "pcdh12", "protein_names_uniprotkb": "Protocadherin-12; Vascular cadherin-2; Vascular endothelial cadherin-2", "protein_names_refseq": "protocadherin-12", "tax_id": 7955, "disease": "", "pathway": " (dre:555419)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133189) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Sep 24, 2014 this sequence version replaced XP_683010.5. COMPLETENESS: full length., [RefSeq]; Cellular adhesion molecule that may play an important role in cell-cell interactions at interendothelial junctions. Acts as a regulator of cell migration, probably via increasing cell-cell adhesion. Promotes homotypic calcium-dependent aggregation and adhesion and clusters at intercellular junctions. Unable to bind to catenins, weakly associates with the cytoskeleton., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8N7TAD5", "ec_number_list": [], "go_molecular_function": "GO:0005509 calcium ion binding;GO:0050839 cell adhesion molecule binding", "go_cellular_component": "GO:0005576 extracellular region;GO:0005886 plasma membrane;GO:0070161 anchoring junction", "go_biological_process": "GO:0007156 homophilic cell adhesion via plasma membrane adhesion molecules;GO:0016339 calcium-dependent cell-cell adhesion via plasma membrane cell adhesion molecules;GO:0009653 anatomical structure morphogenesis", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7F5T8-1", "record_type": "protein", "filter_code": "0000000.0000001.010000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F5V1-1", "uniprot_id": [ { "id": "E7F5V1_DANRE", "url": "https://www.uniprot.org/uniprot/E7F5V1", "type": "external" } ], "mass": 19447.0, "length": 171, "protein_name": "Pro-adrenomedullin", "gene_name": "adma", "organism": "Zebrafish", "refseq_name": "adrenomedullin a precursor", "refseq_ac": [ { "id": "NP_001313638", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001313638", "type": "external" } ], "gene_names_uniprotkb": "adma", "gene_names_refseq": "adma", "protein_names_uniprotkb": "Pro-adrenomedullin", "protein_names_refseq": "adrenomedullin a precursor", "tax_id": 7955, "disease": "stomach cancer (Disease Ontology:DOID:10534); hypertension (Disease Ontology:DOID:10763); malignant hypertension (Disease Ontology:DOID:10824); renovascular hypertension (Disease Ontology:DOID:1591); breast cancer (Disease Ontology:DOID:1612); pancreatic cancer (Disease Ontology:DOID:1793); hyperinsulinism (Disease Ontology:DOID:2018); peripheral vascular disease (Disease Ontology:DOID:341); brain infarction (Disease Ontology:DOID:3454); insulinoma (Disease Ontology:DOID:3892); pulmonary hypertension (Disease Ontology:DOID:6432); abdominal aortic aneurysm (Disease Ontology:DOID:7693); diabetic retinopathy (Disease Ontology:DOID:8947); colorectal cancer (Disease Ontology:DOID:9256); type 2 diabetes mellitus (Disease Ontology:DOID:9352); obesity (Disease Ontology:DOID:9970)", "pathway": " (dre:556502); (R-DRE-419812); (R-DRE-9856530)", "pathway_count": 3, "publication_count": 9, "publication_id_list": "24683187;26469318;27516442;28271061;32084358;32691447;34099692;35314737;8373170", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GDQH01026141.1, GO942564.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505384, SAMEA3505389 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000007.1. On May 24, 2016 this sequence version replaced XP_684417.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 16, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1P2W6", "ec_number_list": [], "go_molecular_function": "GO:0005179 hormone activity;GO:0031700 adrenomedullin receptor binding", "go_cellular_component": "GO:0005615 extracellular space", "go_biological_process": "GO:0007189 adenylate cyclase-activating G protein-coupled receptor signaling pathway;GO:0010460 positive regulation of heart rate;GO:0035809 regulation of urine volume;GO:0003073 regulation of systemic arterial blood pressure;GO:1990410 adrenomedullin receptor signaling pathway", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "E7F5V1-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F5V5-1", "uniprot_id": [ { "id": "E7F5V5_DANRE", "url": "https://www.uniprot.org/uniprot/E7F5V5", "type": "external" } ], "mass": 64275.0, "length": 570, "protein_name": "Actinodin1 precursor", "gene_name": "and1", "organism": "Zebrafish", "refseq_name": "actinodin1 precursor", "refseq_ac": [ { "id": "NP_001184183", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001184183", "type": "external" } ], "gene_names_uniprotkb": "and1; fa96a05; fa99d09; wu:fa96a05; wu:fa99d09", "gene_names_refseq": "and1; fa96a05; fa99d09; wu:fa96a05; wu:fa99d09", "protein_names_uniprotkb": "Actinodin1 precursor", "protein_names_refseq": "2-F11; actinodin1 precursor", "tax_id": 7955, "disease": "", "pathway": " (dre:794315)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "15376328;20574421;23237954;23462472;23598338;33376206;34537221;34660600;37844410", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GFIL01001017.1, SRR32588732.1288069.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505378, SAMEA4476729 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000024.1. On Jun 25, 2025 this sequence version replaced NP_001184183.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications., [RefSeq]; Double gene knockdown of and1 and and2 in zebrafish embryos results in the absence of actinotrichia and impaired fin folds., [RefSeq, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NW68", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "GO:0051216 cartilage development;GO:0033333 fin development", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "E7F5V5-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F5W3-1", "uniprot_id": [ { "id": "E7F5W3_DANRE", "url": "https://www.uniprot.org/uniprot/E7F5W3", "type": "external" } ], "mass": 13718.0, "length": 128, "protein_name": "Histone H2A", "gene_name": "hist1h2a10", "organism": "Zebrafish", "refseq_name": "histone H2A", "refseq_ac": [ { "id": "NP_001373597", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001373597", "type": "external" } ], "gene_names_uniprotkb": "hist1h2a10; si:dkey-108k21.26", "gene_names_refseq": "hist1h2a10; si:dkey-108k21.26", "protein_names_uniprotkb": "Histone H2A", "protein_names_refseq": "histone H2A", "tax_id": 7955, "disease": "", "pathway": " (dre:100332885); (R-DRE-110330); (R-DRE-110331); (R-DRE-201722); (R-DRE-212300); (R-DRE-2299718); (R-DRE-2559580); (R-DRE-2559582); (R-DRE-3214815); (R-DRE-3214858); (R-DRE-427359); (R-DRE-427413); (R-DRE-5250924); (R-DRE-5625886); (R-DRE-5689603); (R-DRE-5689880); (R-DRE-5689901); (R-DRE-68616); (R-DRE-73728); (R-DRE-73772); (R-DRE-8936459); (R-DRE-9018519); (R-DRE-9764725); (R-DRE-9841922); (R-DRE-9843940); (R-DRE-9843970); (R-DRE-9909649); (R-DRE-9940951); (R-DRE-9943411); (R-DRE-9943962)", "pathway_count": 30, "publication_count": 3, "publication_id_list": "21873635;27615797;28252024", "class_list": "", "function": "##Evidence-Data-START## Transcript is intronless :: CT710575.2, SRR26395015.1037825.1 [ECO:0000345] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000025.1. On Aug 29, 2020 this sequence version replaced XP_009296461.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M3B7D9", "ec_number_list": [], "go_molecular_function": "GO:0003677 DNA binding;GO:0046982 protein heterodimerization activity;GO:0030527 structural constituent of chromatin", "go_cellular_component": "GO:0005634 nucleus;GO:0000786 nucleosome", "go_biological_process": "GO:0006950 response to stress;GO:0031507 heterochromatin formation", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "E7F5W3-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F658-1", "uniprot_id": [ { "id": "E7F658_DANRE", "url": "https://www.uniprot.org/uniprot/E7F658", "type": "external" } ], "mass": 14397.0, "length": 127, "protein_name": "Large ribosomal subunit protein mL52", "gene_name": "mrpl52", "organism": "Zebrafish", "refseq_name": "large ribosomal subunit protein mL52", "refseq_ac": [ { "id": "NP_001314839", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001314839", "type": "external" } ], "gene_names_uniprotkb": "mrpl52", "gene_names_refseq": "mrpl52", "protein_names_uniprotkb": "Large ribosomal subunit protein mL52; 39S ribosomal protein L52, mitochondrial", "protein_names_refseq": "large ribosomal subunit protein mL52", "tax_id": 7955, "disease": "", "pathway": " (dre:100007768); (R-DRE-5389840); (R-DRE-5419276); (R-DRE-9937383)", "pathway_count": 4, "publication_count": 3, "publication_id_list": "26469318;34903892;36283702", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: EH576272.1, EH566888.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## ##RefSeq-Attributes-START## gene product(s) localized to mito. :: inferred from homology ##RefSeq-Attributes-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000007.1. On May 28, 2016 this sequence version replaced XP_005172384.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1P8H5", "ec_number_list": [], "go_molecular_function": "GO:0003735 structural constituent of ribosome", "go_cellular_component": "GO:0005762 mitochondrial large ribosomal subunit", "go_biological_process": "GO:0006412 translation;GO:0032543 mitochondrial translation", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "E7F658-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F675-1", "uniprot_id": [ { "id": "E7F675_DANRE", "url": "https://www.uniprot.org/uniprot/E7F675", "type": "external" } ], "mass": 78475.0, "length": 700, "protein_name": "RING finger protein 145", "gene_name": "zmp:0000000662", "organism": "Zebrafish", "refseq_name": "RING finger protein 145", "refseq_ac": [ { "id": "XP_001342512", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_001342512", "type": "external" } ], "gene_names_uniprotkb": "zmp:0000000662", "gene_names_refseq": "zmp:0000000662", "protein_names_uniprotkb": "RING finger protein 145", "protein_names_refseq": "RING finger protein 145", "tax_id": 7955, "disease": "", "pathway": " (dre:100002825)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133188) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 9, 2008 this sequence version replaced XP_001342512.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1Q222", "ec_number_list": [], "go_molecular_function": "GO:0008270 zinc ion binding;GO:0061630 ubiquitin protein ligase activity", "go_cellular_component": "GO:0016020 membrane;GO:0012505 endomembrane system", "go_biological_process": "GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process;GO:0036503 ERAD pathway", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7F675-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F683-1", "uniprot_id": [ { "id": "E7F683_DANRE", "url": "https://www.uniprot.org/uniprot/E7F683", "type": "external" } ], "mass": 69580.0, "length": 623, "protein_name": "Mitogen-activated protein kinase kinase kinase 2", "gene_name": "map3k2", "organism": "Zebrafish", "refseq_name": "mitogen-activated protein kinase kinase kinase 2", "refseq_ac": [ { "id": "XP_686613", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_686613", "type": "external" } ], "gene_names_uniprotkb": "map3k2", "gene_names_refseq": "map3k2", "protein_names_uniprotkb": "Mitogen-activated protein kinase kinase kinase 2", "protein_names_refseq": "mitogen-activated protein kinase kinase kinase 2", "tax_id": 7955, "disease": "", "pathway": " (dre:558321)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133181) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Aug 1, 2013 this sequence version replaced XP_686613.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8N7T5I2", "ec_number_list": [], "go_molecular_function": "GO:0004674 protein serine/threonine kinase activity;GO:0005524 ATP binding;GO:0046872 metal ion binding", "go_cellular_component": "GO:0005829 cytosol", "go_biological_process": "GO:0000165 MAPK cascade", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7F683-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F6A5-1", "uniprot_id": [ { "id": "E7F6A5_DANRE", "url": "https://www.uniprot.org/uniprot/E7F6A5", "type": "external" } ], "mass": 29886.0, "length": 249, "protein_name": "Large ribosomal subunit protein uL29m", "gene_name": "mrpl47", "organism": "Zebrafish", "refseq_name": "large ribosomal subunit protein uL29m", "refseq_ac": [ { "id": "NP_001313322", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001313322", "type": "external" } ], "gene_names_uniprotkb": "mrpl47; id:ibd1090", "gene_names_refseq": "id:ibd1090; mrpl47", "protein_names_uniprotkb": "Large ribosomal subunit protein uL29m", "protein_names_refseq": "large ribosomal subunit protein uL29m", "tax_id": 7955, "disease": "", "pathway": " (dre:557789); (R-DRE-5389840); (R-DRE-5419276); (R-DRE-9937383)", "pathway_count": 4, "publication_count": 2, "publication_id_list": "11731487;26469318", "class_list": "", "function": "", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1P7W5", "ec_number_list": [], "go_molecular_function": "GO:0003735 structural constituent of ribosome", "go_cellular_component": "GO:0005762 mitochondrial large ribosomal subunit", "go_biological_process": "GO:0032543 mitochondrial translation", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "E7F6A5-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F6E2-1", "uniprot_id": [ { "id": "E7F6E2_DANRE", "url": "https://www.uniprot.org/uniprot/E7F6E2", "type": "external" } ], "mass": 78643.0, "length": 685, "protein_name": "RNA binding motif protein 12Bb", "gene_name": "rbm12bb", "organism": "Zebrafish", "refseq_name": "RNA binding motif protein 12Bb", "refseq_ac": [ { "id": "NP_001277069", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001277069", "type": "external" } ], "gene_names_uniprotkb": "rbm12bb; fi89g10; rbm12b; si:ch211-193p21.4; wu:fi89g10; zgc:56148", "gene_names_refseq": "fi89g10; rbm12bb; rbm12b; si:ch211-193p21.4; wu:fi89g10; zgc:56148", "protein_names_uniprotkb": "RNA binding motif protein 12Bb", "protein_names_refseq": "RNA binding motif protein 12Bb; RNA binding motif protein 12B", "tax_id": 7955, "disease": "", "pathway": " (dre:334496)", "pathway_count": 1, "publication_count": 3, "publication_id_list": "21669877;26469318;27189481", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: SRR26395050.113204.1, SRR26395015.1446126.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505371, SAMEA3505372 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000016.1. On Jun 10, 2025 this sequence version replaced NP_001277069.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1P6I4", "ec_number_list": [], "go_molecular_function": "GO:0003723 RNA binding", "go_cellular_component": "GO:0005654 nucleoplasm;GO:1990904 ribonucleoprotein complex", "go_biological_process": "GO:0043484 regulation of RNA splicing", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "E7F6E2-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F6E8-1", "uniprot_id": [ { "id": "E7F6E8_DANRE", "url": "https://www.uniprot.org/uniprot/E7F6E8", "type": "external" } ], "mass": 39501.0, "length": 349, "protein_name": "Draxin", "gene_name": "draxinb", "organism": "Zebrafish", "refseq_name": "draxin", "refseq_ac": [ { "id": "XP_001342212", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_001342212", "type": "external" } ], "gene_names_uniprotkb": "draxinb", "gene_names_refseq": "draxinb", "protein_names_uniprotkb": "Draxin", "protein_names_refseq": "draxin", "tax_id": 7955, "disease": "", "pathway": " (dre:100002427)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133198) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Sep 24, 2014 this sequence version replaced XP_001342212.4. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M9PWW3", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005576 extracellular region", "go_biological_process": "GO:0016055 Wnt signaling pathway;GO:0007411 axon guidance", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7F6E8-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F6E9-1", "uniprot_id": [ { "id": "E7F6E9_DANRE", "url": "https://www.uniprot.org/uniprot/E7F6E9", "type": "external" } ], "mass": 73977.0, "length": 668, "protein_name": "ETS domain-containing transcription factor ERF", "gene_name": "erfl3", "organism": "Zebrafish", "refseq_name": "ETS domain-containing transcription factor ERF", "refseq_ac": [ { "id": "XP_694263", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_694263", "type": "external" } ], "gene_names_uniprotkb": "erfl3", "gene_names_refseq": "erfl3", "protein_names_uniprotkb": "ETS domain-containing transcription factor ERF", "protein_names_refseq": "ETS domain-containing transcription factor ERF", "tax_id": 7955, "disease": "", "pathway": " (R-DRE-2559585)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133191) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Aug 1, 2013 this sequence version replaced XP_694263.3. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8N7TBE5;A0AC58HIZ3", "ec_number_list": [], "go_molecular_function": "GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific;GO:0043565 sequence-specific DNA binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006357 regulation of transcription by RNA polymerase II;GO:0030154 cell differentiation", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7F6E9-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F6G2-1", "uniprot_id": [ { "id": "E7F6G2_DANRE", "url": "https://www.uniprot.org/uniprot/E7F6G2", "type": "external" } ], "mass": 65636.0, "length": 580, "protein_name": "Hexosyltransferase", "gene_name": "csgalnact1a", "organism": "Zebrafish", "refseq_name": "chondroitin sulfate N-acetylgalactosaminyltransferase 1", "refseq_ac": [ { "id": "XP_001333479", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_001333479", "type": "external" } ], "gene_names_uniprotkb": "csgalnact1a", "gene_names_refseq": "csgalnact1a", "protein_names_uniprotkb": "Hexosyltransferase; 2.4.1.-", "protein_names_refseq": "chondroitin sulfate N-acetylgalactosaminyltransferase 1", "tax_id": 7955, "disease": "", "pathway": " (dre:793671); (R-DRE-2022870)", "pathway_count": 2, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133185) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Aug 1, 2013 this sequence version replaced XP_001333479.3. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1PU89", "ec_number_list": [ { "id": "2.4.1.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.4.1.-", "type": "external" } ], "go_molecular_function": "GO:0046872 metal ion binding;GO:0047237 glucuronylgalactosylproteoglycan 4-beta-N-acetylgalactosaminyltransferase activity;GO:0047238 glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase activity", "go_cellular_component": "GO:0032580 Golgi cisterna membrane", "go_biological_process": "GO:0015012 heparan sulfate proteoglycan biosynthetic process;GO:0050650 chondroitin sulfate proteoglycan biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7F6G2-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F6I4-1", "uniprot_id": [ { "id": "E7F6I4_DANRE", "url": "https://www.uniprot.org/uniprot/E7F6I4", "type": "external" } ], "mass": 53073.0, "length": 474, "protein_name": "Uncharacterized protein LOC561841", "gene_name": "si:ch211-59o9.10", "organism": "Zebrafish", "refseq_name": "uncharacterized protein LOC561841", "refseq_ac": [ { "id": "NP_001352283", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001352283", "type": "external" } ], "gene_names_uniprotkb": "si:ch211-59o9.10; fb39e10; wu:fb39e10", "gene_names_refseq": "fb39e10; si:ch211-59o9.10; wu:fb39e10", "protein_names_uniprotkb": "Uncharacterized protein LOC561841", "protein_names_refseq": "uncharacterized protein LOC561841", "tax_id": 7955, "disease": "", "pathway": " (dre:561841); (R-DRE-983168)", "pathway_count": 2, "publication_count": 2, "publication_id_list": "26469318;27189481", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: SRR32588729.26770103.1, SRR32588728.13797453.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505375, SAMEA3505383 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000025.1. On Jun 25, 2025 this sequence version replaced NP_001352283.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1QKU8", "ec_number_list": [], "go_molecular_function": "GO:0008270 zinc ion binding;GO:0061630 ubiquitin protein ligase activity", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0045893 positive regulation of DNA-templated transcription;GO:0016567 protein ubiquitination;GO:0006511 ubiquitin-dependent protein catabolic process", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "E7F6I4-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F6J7-1", "uniprot_id": [ { "id": "E7F6J7_DANRE", "url": "https://www.uniprot.org/uniprot/E7F6J7", "type": "external" } ], "mass": 131762.0, "length": 1171, "protein_name": "Protein Jumonji", "gene_name": "jarid2a", "organism": "Zebrafish", "refseq_name": "protein Jumonji", "refseq_ac": [ { "id": "XP_001345885", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_001345885", "type": "external" } ], "gene_names_uniprotkb": "jarid2a", "gene_names_refseq": "jarid2a", "protein_names_uniprotkb": "Protein Jumonji", "protein_names_refseq": "protein Jumonji", "tax_id": 7955, "disease": "autistic disorder (Disease Ontology:DOID:12849); aortic valve stenosis (Disease Ontology:DOID:1712)", "pathway": " (dre:100007426)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133191) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Aug 1, 2013 this sequence version replaced XP_001345885.3. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 2, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1Q2C1", "ec_number_list": [], "go_molecular_function": "GO:0003677 DNA binding", "go_cellular_component": "GO:0005634 nucleus;GO:0000785 chromatin", "go_biological_process": "GO:0006338 chromatin remodeling;GO:0010468 regulation of gene expression", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7F6J7-1", "record_type": "protein", "filter_code": "0000000.0000011.010000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F6M9-1", "uniprot_id": [ { "id": "E7F6M9_DANRE", "url": "https://www.uniprot.org/uniprot/E7F6M9", "type": "external" } ], "mass": 50572.0, "length": 441, "protein_name": "RILP-like protein 2", "gene_name": "rilp", "organism": "Zebrafish", "refseq_name": "RILP-like protein 1", "refseq_ac": [ { "id": "XP_001344183", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_001344183", "type": "external" } ], "gene_names_uniprotkb": "rilp", "gene_names_refseq": "rilp", "protein_names_uniprotkb": "RILP-like protein 2", "protein_names_refseq": "RILP-like protein 1", "tax_id": 7955, "disease": "", "pathway": " (dre:100005026)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133190) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Aug 1, 2013 this sequence version replaced XP_001344183.3. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1PSU1", "ec_number_list": [], "go_molecular_function": "GO:0046983 protein dimerization activity;GO:0031267 small GTPase binding;GO:0051959 dynein light intermediate chain binding", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005813 centrosome;GO:0005829 cytosol;GO:0036064 ciliary basal body", "go_biological_process": "GO:0015031 protein transport;GO:0060271 cilium assembly", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7F6M9-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F6P6-1", "uniprot_id": [ { "id": "E7F6P6_DANRE", "url": "https://www.uniprot.org/uniprot/E7F6P6", "type": "external" } ], "mass": 49818.0, "length": 447, "protein_name": "3.6.1.1; Exopolyphosphatase PRUNE1", "gene_name": "prune", "organism": "Zebrafish", "refseq_name": "exopolyphosphatase PRUNE1", "refseq_ac": [ { "id": "NP_001153766", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001153766", "type": "external" } ], "gene_names_uniprotkb": "prune", "gene_names_refseq": "prune1; prune", "protein_names_uniprotkb": "3.6.1.1; Exopolyphosphatase PRUNE1", "protein_names_refseq": "exopolyphosphatase PRUNE1", "tax_id": 7955, "disease": "", "pathway": " (dre:563343)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "28252024", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GFIL01023623.1, SRR32588716.18884155.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA4476740, SAMEA4476744 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000016.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NSX6", "ec_number_list": [], "go_molecular_function": "GO:0046872 metal ion binding;GO:0004427 inorganic diphosphate phosphatase activity;GO:0004309 exopolyphosphatase activity", "go_cellular_component": "GO:0005737 cytoplasm", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "E7F6P6-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F6Q1-1", "uniprot_id": [ { "id": "E7F6Q1_DANRE", "url": "https://www.uniprot.org/uniprot/E7F6Q1", "type": "external" } ], "mass": 23950.0, "length": 207, "protein_name": "Max dimerization protein 4 isoform X1", "gene_name": "mxd4", "organism": "Zebrafish", "refseq_name": "max dimerization protein 4 isoform X1", "refseq_ac": [ { "id": "XP_687970", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_687970", "type": "external" } ], "gene_names_uniprotkb": "mxd4", "gene_names_refseq": "mxd4", "protein_names_uniprotkb": "Max dimerization protein 4 isoform X1", "protein_names_refseq": "max dimerization protein 4 isoform X1", "tax_id": 7955, "disease": "", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133176) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Aug 1, 2013 this sequence version replaced XP_687970.5. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8N7TET9", "ec_number_list": [], "go_molecular_function": "GO:0046983 protein dimerization activity;GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding;GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006357 regulation of transcription by RNA polymerase II", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7F6Q1-1", "record_type": "protein", "filter_code": "0000000.0000000.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F6T6-1", "uniprot_id": [ { "id": "E7F6T6_DANRE", "url": "https://www.uniprot.org/uniprot/E7F6T6", "type": "external" } ], "mass": 33363.0, "length": 303, "protein_name": "Solute carrier family 25 member 51b", "gene_name": "slc25a51b", "organism": "Zebrafish", "refseq_name": "solute carrier family 25 member 51b", "refseq_ac": [ { "id": "NP_001373173", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001373173", "type": "external" } ], "gene_names_uniprotkb": "slc25a51b; si:dkey-185e18.6", "gene_names_refseq": "si:dkey-185e18.6; slc25a51b", "protein_names_uniprotkb": "Solute carrier family 25 member 51b", "protein_names_refseq": "solute carrier family 25 member 51b", "tax_id": 7955, "disease": "", "pathway": " (dre:556422); (R-DRE-196807)", "pathway_count": 2, "publication_count": 2, "publication_id_list": "26469318;28252024", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: DN597739.1, EH536810.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000014.1. On Jun 25, 2025 this sequence version replaced NP_001373173.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M3AZL2", "ec_number_list": [], "go_molecular_function": "GO:0051724 NAD transmembrane transporter activity", "go_cellular_component": "GO:0005739 mitochondrion;GO:0005743 mitochondrial inner membrane", "go_biological_process": "GO:1990549 mitochondrial NAD transmembrane transport", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "E7F6T6-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F6V3-1", "uniprot_id": [ { "id": "E7F6V3_DANRE", "url": "https://www.uniprot.org/uniprot/E7F6V3", "type": "external" } ], "mass": 56153.0, "length": 501, "protein_name": "Thiamine transporter 2", "gene_name": "slc19a3a", "organism": "Zebrafish", "refseq_name": "thiamine transporter 2", "refseq_ac": [ { "id": "XP_686091", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_686091", "type": "external" } ], "gene_names_uniprotkb": "slc19a3a", "gene_names_refseq": "slc19a3a", "protein_names_uniprotkb": "Thiamine transporter 2", "protein_names_refseq": "thiamine transporter 2", "tax_id": 7955, "disease": "biotin-responsive basal ganglia disease (Disease Ontology:DOID:0050659)", "pathway": " (dre:557854); (R-DRE-196819)", "pathway_count": 2, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133190) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 9, 2008 this sequence version replaced XP_686091.2. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8N7TAR4", "ec_number_list": [], "go_molecular_function": "GO:0090482 vitamin transmembrane transporter activity", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7F6V3-1", "record_type": "protein", "filter_code": "0000000.0000011.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F6X2-1", "uniprot_id": [ { "id": "E7F6X2_DANRE", "url": "https://www.uniprot.org/uniprot/E7F6X2", "type": "external" } ], "mass": 18845.0, "length": 171, "protein_name": "vitamin-K-epoxide reductase (warfarin-sensitive)", "gene_name": "vkorc1", "organism": "Zebrafish", "refseq_name": "vitamin K epoxide reductase complex subunit 1", "refseq_ac": [ { "id": "NP_001314861", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001314861", "type": "external" } ], "gene_names_uniprotkb": "vkorc1; fc03a11; si:dkey-32n7.10; wu:fc03a11", "gene_names_refseq": "fc03a11; si:dkey-32n7.10; vkorc1; wu:fc03a11", "protein_names_uniprotkb": "vitamin-K-epoxide reductase (warfarin-sensitive); 1.17.4.4", "protein_names_refseq": "vitamin K epoxide reductase complex subunit 1", "tax_id": 7955, "disease": "warfarin resistance (Disease Ontology:DOID:0080665); combined deficiency of vitamin K-dependent clotting factors 2 (Disease Ontology:DOID:0112174)", "pathway": " (dre:100000559); (R-DRE-6806664)", "pathway_count": 2, "publication_count": 5, "publication_id_list": "25094061;25758222;25792234;26469318;39778749", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GW709538.1, GDQH01010381.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA4476767, SAMEA4476813 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000012.1. On May 28, 2016 this sequence version replaced XP_001336460.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 2, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1P994", "ec_number_list": [ { "id": "1.17.4.4", "url": "https://www.rhea-db.org/rhea/?query=ec:1.17.4.4", "type": "external" } ], "go_molecular_function": "GO:0047057 vitamin-K-epoxide reductase (warfarin-sensitive) activity;GO:0048038 quinone binding", "go_cellular_component": "GO:0005789 endoplasmic reticulum membrane", "go_biological_process": "GO:0007596 blood coagulation;GO:0042373 vitamin K metabolic process", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "E7F6X2-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F6Z5-1", "uniprot_id": [ { "id": "E7F6Z5_DANRE", "url": "https://www.uniprot.org/uniprot/E7F6Z5", "type": "external" } ], "mass": 87539.0, "length": 827, "protein_name": "Ataxin-1", "gene_name": "atxn1b", "organism": "Zebrafish", "refseq_name": "ataxin-1", "refseq_ac": [ { "id": "XP_068070234", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_068070234", "type": "external" } ], "gene_names_uniprotkb": "atxn1b", "gene_names_refseq": "atxn1b", "protein_names_uniprotkb": "Ataxin-1", "protein_names_refseq": "ataxin-1", "tax_id": 7955, "disease": "spinocerebellar ataxia 1 (Disease Ontology:DOID:0050954); autosomal dominant cerebellar ataxia (Disease Ontology:DOID:1441)", "pathway": " (dre:565841)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133191) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 2, "predicted_n_glycosites": 0, "predicted_o_glycosites": 2, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 2, "glyco_site_count": 2, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M2B4I6;A0AC58HHJ3;A0AC58HHR7;A0AC58HHR8;A0AC58HHS5", "ec_number_list": [], "go_molecular_function": "GO:0003677 DNA binding;GO:0003682 chromatin binding;GO:0003723 RNA binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0000122 negative regulation of transcription by RNA polymerase II;GO:0006351 DNA-templated transcription;GO:0007420 brain development", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7F6Z5-1", "record_type": "protein", "filter_code": "0000000.0000011.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F716-1", "uniprot_id": [ { "id": "E7F716_DANRE", "url": "https://www.uniprot.org/uniprot/E7F716", "type": "external" } ], "mass": 65258.0, "length": 571, "protein_name": "Tyrosine-protein phosphatase non-receptor type 9", "gene_name": "ptpn9a", "organism": "Zebrafish", "refseq_name": "tyrosine-protein phosphatase non-receptor type 9", "refseq_ac": [ { "id": "XP_005163030", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005163030", "type": "external" } ], "gene_names_uniprotkb": "ptpn9a", "gene_names_refseq": "ptpn9a", "protein_names_uniprotkb": "Tyrosine-protein phosphatase non-receptor type 9; 3.1.3.48", "protein_names_refseq": "tyrosine-protein phosphatase non-receptor type 9", "tax_id": 7955, "disease": "", "pathway": " (dre:100526653)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133200) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]; Protein-tyrosine phosphatase that could participate in the transfer of hydrophobic ligands or in functions of the Golgi apparatus., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M2B9Y1", "ec_number_list": [], "go_molecular_function": "GO:0004725 protein tyrosine phosphatase activity", "go_cellular_component": "GO:0005737 cytoplasm", "go_biological_process": "GO:0043249 erythrocyte maturation;GO:0007165 signal transduction;GO:0048821 erythrocyte development;GO:0061515 myeloid cell development;GO:0060215 primitive hemopoiesis", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7F716-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F718-1", "uniprot_id": [ { "id": "E7F718_DANRE", "url": "https://www.uniprot.org/uniprot/E7F718", "type": "external" } ], "mass": 53852.0, "length": 463, "protein_name": "Group 3 secretory phospholipase A2", "gene_name": "LOC101885160", "organism": "Zebrafish", "refseq_name": "group 3 secretory phospholipase A2", "refseq_ac": [ { "id": "XP_005169114", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005169114", "type": "external" } ], "gene_names_uniprotkb": "LOC101885160", "gene_names_refseq": "LOC101885160", "protein_names_uniprotkb": "Group 3 secretory phospholipase A2", "protein_names_refseq": "group 3 secretory phospholipase A2", "tax_id": 7955, "disease": "", "pathway": " (dre:101885160)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133182) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M2BGC8", "ec_number_list": [], "go_molecular_function": "GO:0004623 phospholipase A2 activity", "go_cellular_component": "GO:0005576 extracellular region", "go_biological_process": "GO:0050482 arachidonate secretion;GO:0006644 phospholipid metabolic process", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7F718-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F734-1", "uniprot_id": [ { "id": "E7F734_DANRE", "url": "https://www.uniprot.org/uniprot/E7F734", "type": "external" } ], "mass": 33667.0, "length": 287, "protein_name": "Sulfotransferase", "gene_name": "sult2st1", "organism": "Zebrafish", "refseq_name": "sulfotransferase family 2, cytosolic sulfotransferase 1 isoform X1", "refseq_ac": [ { "id": "XP_005156055", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005156055", "type": "external" } ], "gene_names_uniprotkb": "sult2st1; id:ibd1140; sult2st", "gene_names_refseq": "id:ibd1140; sult2st1; sult2st", "protein_names_uniprotkb": "Sulfotransferase; 2.8.2.-", "protein_names_refseq": "sulfotransferase family 2, cytosolic sulfotransferase 1 isoform X1", "tax_id": 7955, "disease": "autosomal recessive congenital ichthyosis 14 (Disease Ontology:DOID:0080258); prostate cancer (Disease Ontology:DOID:10283)", "pathway": " (R-DRE-156584); (R-DRE-9753281)", "pathway_count": 2, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133187) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 2, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M2B2C8", "ec_number_list": [ { "id": "2.8.2.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.8.2.-", "type": "external" }, { "id": "2.8.2.n2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.8.2.n2", "type": "external" } ], "go_molecular_function": "GO:0008146 sulfotransferase activity;GO:0016783 sulfurtransferase activity", "go_cellular_component": "GO:0005737 cytoplasm", "go_biological_process": "GO:0051923 sulfation;GO:0006805 xenobiotic metabolic process;GO:0006584 catecholamine metabolic process", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7F734-1", "record_type": "protein", "filter_code": "0000000.0000011.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F798-1", "uniprot_id": [ { "id": "E7F798_DANRE", "url": "https://www.uniprot.org/uniprot/E7F798", "type": "external" } ], "mass": 96901.0, "length": 863, "protein_name": "Chloride channel protein", "gene_name": "clcn6", "organism": "Zebrafish", "refseq_name": "H(+)/Cl(-) exchange transporter 6 isoform X1", "refseq_ac": [ { "id": "XP_009302552", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009302552", "type": "external" } ], "gene_names_uniprotkb": "clcn6", "gene_names_refseq": "clcn6", "protein_names_uniprotkb": "Chloride channel protein", "protein_names_refseq": "H(+)/Cl(-) exchange transporter 6 isoform X1", "tax_id": 7955, "disease": "neuronal ceroid lipofuscinosis 15 (Disease Ontology:DOID:0061189); coronary artery disease (Disease Ontology:DOID:3393)", "pathway": " (dre:568122); (R-DRE-2672351)", "pathway_count": 2, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133183) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]; Voltage-gated channel mediating the exchange of chloride ions against protons. Functions as antiporter and contributes to the acidification of the late endosome lumen. The CLC channel family contains both chloride channels and proton-coupled anion transporters that exchange chloride or another anion for protons. The presence of conserved gating glutamate residues is typical for family members that function as antiporters., [UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 2, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M3AVK2", "ec_number_list": [], "go_molecular_function": "GO:0005524 ATP binding;GO:0015297 antiporter activity;GO:0005247 voltage-gated chloride channel activity", "go_cellular_component": "GO:0031902 late endosome membrane", "go_biological_process": "GO:0006821 chloride transport", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7F798-1", "record_type": "protein", "filter_code": "0000000.0000011.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F7F6-1", "uniprot_id": [ { "id": "E7F7F6_DANRE", "url": "https://www.uniprot.org/uniprot/E7F7F6", "type": "external" } ], "mass": 56239.0, "length": 505, "protein_name": "Nonsense-mediated mRNA decay factor SMG9", "gene_name": "smg9", "organism": "Zebrafish", "refseq_name": "nonsense-mediated mRNA decay factor SMG9", "refseq_ac": [ { "id": "XP_001923815", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_001923815", "type": "external" } ], "gene_names_uniprotkb": "smg9", "gene_names_refseq": "smg9", "protein_names_uniprotkb": "Nonsense-mediated mRNA decay factor SMG9", "protein_names_refseq": "nonsense-mediated mRNA decay factor SMG9", "tax_id": 7955, "disease": "hepatocellular carcinoma (Disease Ontology:DOID:684)", "pathway": " (dre:562557); (R-DRE-975957)", "pathway_count": 2, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133191) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Mar 23, 2011 this sequence version replaced XP_001923815.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1QVH1", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7F7F6-1", "record_type": "protein", "filter_code": "0000000.0000011.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F7G5-1", "uniprot_id": [ { "id": "E7F7G5_DANRE", "url": "https://www.uniprot.org/uniprot/E7F7G5", "type": "external" } ], "mass": 56837.0, "length": 488, "protein_name": "Tektin", "gene_name": "tekt3", "organism": "Zebrafish", "refseq_name": "tektin-3", "refseq_ac": [ { "id": "XP_701169", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_701169", "type": "external" } ], "gene_names_uniprotkb": "tekt3", "gene_names_refseq": "tekt3", "protein_names_uniprotkb": "Tektin", "protein_names_refseq": "tektin-3", "tax_id": 7955, "disease": "spermatogenic failure 81 (Disease Ontology:DOID:0070580)", "pathway": " (dre:572368)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133187) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Feb 15, 2007 this sequence version replaced XP_701169.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8N7URI0", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0015630 microtubule cytoskeleton;GO:0036126 sperm flagellum;GO:0005930 axoneme", "go_biological_process": "GO:0060294 cilium movement involved in cell motility;GO:0060271 cilium assembly", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7F7G5-1", "record_type": "protein", "filter_code": "0000000.0000011.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F7G6-1", "uniprot_id": [ { "id": "E7F7G6_DANRE", "url": "https://www.uniprot.org/uniprot/E7F7G6", "type": "external" } ], "mass": 36777.0, "length": 336, "protein_name": "Cdc42 effector protein 4", "gene_name": "cdc42ep4b", "organism": "Zebrafish", "refseq_name": "cdc42 effector protein 4", "refseq_ac": [ { "id": "XP_003199689", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003199689", "type": "external" } ], "gene_names_uniprotkb": "cdc42ep4b", "gene_names_refseq": "cdc42ep4b", "protein_names_uniprotkb": "Cdc42 effector protein 4", "protein_names_refseq": "cdc42 effector protein 4", "tax_id": 7955, "disease": "", "pathway": " (dre:100002938); (R-DRE-9013148); (R-DRE-9013149); (R-DRE-9013404); (R-DRE-9013406)", "pathway_count": 5, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133187) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1RNR2", "ec_number_list": [], "go_molecular_function": "GO:0031267 small GTPase binding", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005856 cytoskeleton;GO:0005886 plasma membrane;GO:0012505 endomembrane system", "go_biological_process": "GO:0007266 Rho protein signal transduction;GO:0008360 regulation of cell shape;GO:0031274 positive regulation of pseudopodium assembly;GO:0030838 positive regulation of actin filament polymerization", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7F7G6-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F7H4-1", "uniprot_id": [ { "id": "E7F7H4_DANRE", "url": "https://www.uniprot.org/uniprot/E7F7H4", "type": "external" } ], "mass": 26428.0, "length": 225, "protein_name": "Kv channel-interacting protein 4", "gene_name": "kcnip4b", "organism": "Zebrafish", "refseq_name": "Kv channel-interacting protein 4 isoform X1", "refseq_ac": [ { "id": "XP_003197705", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003197705", "type": "external" } ], "gene_names_uniprotkb": "kcnip4b", "gene_names_refseq": "kcnip4b", "protein_names_uniprotkb": "Kv channel-interacting protein 4", "protein_names_refseq": "Kv channel-interacting protein 4 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:100534855); (R-DRE-5576894)", "pathway_count": 2, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133176) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Aug 1, 2013 this sequence version replaced XP_003197705.1. COMPLETENESS: full length., [RefSeq]; May be involved in the calcium-dependent regulation of rhodopsin phosphorylation. Binds three calcium ions., [UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1RLK8", "ec_number_list": [], "go_molecular_function": "GO:0015459 potassium channel regulator activity;GO:0005509 calcium ion binding;GO:0005267 potassium channel activity", "go_cellular_component": "GO:0005777 peroxisome;GO:0008076 voltage-gated potassium channel complex", "go_biological_process": "GO:1901379 regulation of potassium ion transmembrane transport;GO:0009966 regulation of signal transduction", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7F7H4-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F7J1-1", "uniprot_id": [ { "id": "E7F7J1_DANRE", "url": "https://www.uniprot.org/uniprot/E7F7J1", "type": "external" } ], "mass": 19302.0, "length": 175, "protein_name": "Adrenodoxin", "gene_name": "fdx1", "organism": "Zebrafish", "refseq_name": "adrenodoxin", "refseq_ac": [ { "id": "XP_001922722", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_001922722", "type": "external" } ], "gene_names_uniprotkb": "fdx1", "gene_names_refseq": "fdx1", "protein_names_uniprotkb": "Adrenodoxin", "protein_names_refseq": "adrenodoxin", "tax_id": 7955, "disease": "pancreatitis (Disease Ontology:DOID:4989)", "pathway": " (dre:100126232); (R-DRE-1362409); (R-DRE-196108); (R-DRE-211976); (R-DRE-2395516); (R-DRE-9857492)", "pathway_count": 6, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133184) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Mar 30, 2010 this sequence version replaced XP_001922722.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1QKT2", "ec_number_list": [], "go_molecular_function": "GO:0009055 electron transfer activity;GO:0046872 metal ion binding;GO:0051537 2 iron, 2 sulfur cluster binding", "go_cellular_component": "GO:0005739 mitochondrion;GO:0005759 mitochondrial matrix", "go_biological_process": "GO:0022900 electron transport chain;GO:0140647 P450-containing electron transport chain;GO:1904087 negative regulation of epiboly involved in gastrulation with mouth forming second", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7F7J1-1", "record_type": "protein", "filter_code": "0000000.0000011.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F7K1-1", "uniprot_id": [ { "id": "E7F7K1_DANRE", "url": "https://www.uniprot.org/uniprot/E7F7K1", "type": "external" } ], "mass": 50209.0, "length": 443, "protein_name": "BTB/POZ domain-containing protein KCTD12b isoform X1", "gene_name": "kctd12b", "organism": "Zebrafish", "refseq_name": "BTB/POZ domain-containing protein KCTD12b isoform X1", "refseq_ac": [ { "id": "XP_009305996", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009305996", "type": "external" } ], "gene_names_uniprotkb": "kctd12b; lrl2; zgc:110242", "gene_names_refseq": "kctd12b; lrl2; zgc:110242", "protein_names_uniprotkb": "BTB/POZ domain-containing protein KCTD12b isoform X1", "protein_names_refseq": "BTB/POZ domain-containing protein KCTD12b isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:550324)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "16207761;25819227;36407110;36805134", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133189) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]; Auxiliary subunit of GABA-B receptors that determine the pharmacology and kinetics of the receptor response. Increases agonist potency and markedly alter the G-protein signaling of the receptors by accelerating onset and promoting desensitization., [UniProtKB, UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M3AZM6;A0AC58H699", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0043235 receptor complex;GO:0045211 postsynaptic membrane;GO:0042734 presynaptic membrane", "go_biological_process": "GO:0051260 protein homooligomerization;GO:0008277 regulation of G protein-coupled receptor signaling pathway", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "E7F7K1-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F7K7-1", "uniprot_id": [ { "id": "E7F7K7_DANRE", "url": "https://www.uniprot.org/uniprot/E7F7K7", "type": "external" } ], "mass": 32938.0, "length": 293, "protein_name": "Transmembrane protein 178B", "gene_name": "tmem276b", "organism": "Zebrafish", "refseq_name": "transmembrane protein 178B", "refseq_ac": [ { "id": "XP_687728", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_687728", "type": "external" } ], "gene_names_uniprotkb": "tmem276b", "gene_names_refseq": "tmem276b", "protein_names_uniprotkb": "Transmembrane protein 178B", "protein_names_refseq": "transmembrane protein 178B", "tax_id": 7955, "disease": "", "pathway": " (dre:559304)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133182) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8N7UV38", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0016020 membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7F7K7-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F7L0-1", "uniprot_id": [ { "id": "E7F7L0_DANRE", "url": "https://www.uniprot.org/uniprot/E7F7L0", "type": "external" } ], "mass": 99208.0, "length": 887, "protein_name": "NLR family CARD domain-containing protein 3", "gene_name": "si:dkey-118k5.3", "organism": "Zebrafish", "refseq_name": "NLR family CARD domain-containing protein 3", "refseq_ac": [ { "id": "XP_005157726", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005157726", "type": "external" } ], "gene_names_uniprotkb": "si:dkey-118k5.3", "gene_names_refseq": "si:dkey-118k5.3", "protein_names_uniprotkb": "NLR family CARD domain-containing protein 3", "protein_names_refseq": "NLR family CARD domain-containing protein 3", "tax_id": 7955, "disease": "", "pathway": " (dre:101882478)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133190) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M2B3W2", "ec_number_list": [], "go_molecular_function": "GO:0005524 ATP binding", "go_cellular_component": "GO:0005737 cytoplasm;GO:0016323 basolateral plasma membrane", "go_biological_process": "GO:0045087 innate immune response;GO:0042981 regulation of apoptotic process", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7F7L0-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F7L9-1", "uniprot_id": [ { "id": "E7F7L9_DANRE", "url": "https://www.uniprot.org/uniprot/E7F7L9", "type": "external" } ], "mass": 51124.0, "length": 441, "protein_name": "Uncharacterized protein si:cabz01054394.5 isoform X1; Uncharacterized protein si:cabz01054394.5 isoform X2", "gene_name": "si:cabz01054394.5", "organism": "Zebrafish", "refseq_name": "uncharacterized protein si:cabz01054394.5 isoform X1", "refseq_ac": [ { "id": "XP_021330973", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021330973", "type": "external" } ], "gene_names_uniprotkb": "si:cabz01054394.5", "gene_names_refseq": "si:cabz01054394.5", "protein_names_uniprotkb": "Uncharacterized protein si:cabz01054394.5 isoform X1; Uncharacterized protein si:cabz01054394.5 isoform X2", "protein_names_refseq": "uncharacterized protein si:cabz01054394.5 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:101886221)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133179) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]; May be involved in transcriptional regulation., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M9PV71;A0AC58JDS1;A0AC58JDS2;A0AC58JDS3;A0AC58JDS4;A0AC58JDS6;A0AC58JDT1;A0AC58JDU0", "ec_number_list": [], "go_molecular_function": "GO:0008270 zinc ion binding;GO:0042802 identical protein binding;GO:0000977 RNA polymerase II transcription regulatory region sequence-specific DNA binding;GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0000122 negative regulation of transcription by RNA polymerase II;GO:0006351 DNA-templated transcription;GO:0006357 regulation of transcription by RNA polymerase II;GO:0045595 regulation of cell differentiation", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7F7L9-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F7N8-1", "uniprot_id": [ { "id": "E7F7N8_DANRE", "url": "https://www.uniprot.org/uniprot/E7F7N8", "type": "external" } ], "mass": 42208.0, "length": 360, "protein_name": "NF-kappa-B inhibitor-like protein 1", "gene_name": "nfkbil1", "organism": "Zebrafish", "refseq_name": "NF-kappa-B inhibitor-like protein 1", "refseq_ac": [ { "id": "XP_005155508", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005155508", "type": "external" } ], "gene_names_uniprotkb": "nfkbil1", "gene_names_refseq": "nfkbil1", "protein_names_uniprotkb": "NF-kappa-B inhibitor-like protein 1; Inhibitor of kappa B-like protein; Nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor-like 1", "protein_names_refseq": "NF-kappa-B inhibitor-like protein 1", "tax_id": 7955, "disease": "rheumatoid arthritis (Disease Ontology:DOID:7148)", "pathway": " (dre:101887110)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133185) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M2B2C0", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0043124 negative regulation of canonical NF-kappaB signal transduction", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7F7N8-1", "record_type": "protein", "filter_code": "0000000.0000011.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F7U9-1", "uniprot_id": [ { "id": "E7F7U9_DANRE", "url": "https://www.uniprot.org/uniprot/E7F7U9", "type": "external" } ], "mass": 60041.0, "length": 537, "protein_name": "Importin subunit alpha", "gene_name": "kpna6", "organism": "Zebrafish", "refseq_name": "importin subunit alpha-7", "refseq_ac": [ { "id": "XP_001923921", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_001923921", "type": "external" } ], "gene_names_uniprotkb": "kpna6", "gene_names_refseq": "kpna6", "protein_names_uniprotkb": "Importin subunit alpha", "protein_names_refseq": "importin subunit alpha-7", "tax_id": 7955, "disease": "", "pathway": " (dre:100149852); (R-DRE-68616)", "pathway_count": 2, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133194) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1QRD2", "ec_number_list": [], "go_molecular_function": "GO:0008139 nuclear localization sequence binding;GO:0061608 nuclear import signal receptor activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0042564 NLS-dependent protein nuclear import complex", "go_biological_process": "GO:0048513 animal organ development;GO:0006607 NLS-bearing protein import into nucleus", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7F7U9-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F807-1", "uniprot_id": [ { "id": "E7F807_DANRE", "url": "https://www.uniprot.org/uniprot/E7F807", "type": "external" } ], "mass": 48147.0, "length": 421, "protein_name": "ATP-sensitive inward rectifier potassium channel 12", "gene_name": "kcnj12b", "organism": "Zebrafish", "refseq_name": "ATP-sensitive inward rectifier potassium channel 12", "refseq_ac": [ { "id": "XP_001335950", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_001335950", "type": "external" } ], "gene_names_uniprotkb": "kcnj12b", "gene_names_refseq": "kcnj12b", "protein_names_uniprotkb": "ATP-sensitive inward rectifier potassium channel 12", "protein_names_refseq": "ATP-sensitive inward rectifier potassium channel 12", "tax_id": 7955, "disease": "EAST syndrome (Disease Ontology:DOID:0060484)", "pathway": " (dre:795702)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133178) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1Q751;F6PAH0", "ec_number_list": [ { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "1.5.1.2", "url": "https://www.rhea-db.org/rhea/?query=ec:1.5.1.2", "type": "external" } ], "go_molecular_function": "GO:0005242 inward rectifier potassium channel activity", "go_cellular_component": "GO:0005886 plasma membrane;GO:0034702 monoatomic ion channel complex", "go_biological_process": "GO:0007399 nervous system development;GO:1990573 potassium ion import across plasma membrane", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7F807-1", "record_type": "protein", "filter_code": "0000000.0000011.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F822-1", "uniprot_id": [ { "id": "E7F822_DANRE", "url": "https://www.uniprot.org/uniprot/E7F822", "type": "external" } ], "mass": 43260.0, "length": 380, "protein_name": "Pancreatic secretory granule membrane major glycoprotein GP2", "gene_name": "si:dkeyp-110a12.4", "organism": "Zebrafish", "refseq_name": "pancreatic secretory granule membrane major glycoprotein GP2", "refseq_ac": [ { "id": "XP_001336393", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_001336393", "type": "external" } ], "gene_names_uniprotkb": "si:dkeyp-110a12.4", "gene_names_refseq": "si:dkeyp-110a12.4", "protein_names_uniprotkb": "Pancreatic secretory granule membrane major glycoprotein GP2", "protein_names_refseq": "pancreatic secretory granule membrane major glycoprotein GP2", "tax_id": 7955, "disease": "", "pathway": " (dre:100001360)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133192) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 9, 2008 this sequence version replaced XP_001336393.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1PUH2", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005615 extracellular space;GO:0009986 cell surface", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7F822-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F853-1", "uniprot_id": [ { "id": "E7F853_DANRE", "url": "https://www.uniprot.org/uniprot/E7F853", "type": "external" } ], "mass": 102224.0, "length": 942, "protein_name": "Ligand-dependent nuclear receptor-interacting factor 1 isoform X1", "gene_name": "lrif1", "organism": "Zebrafish", "refseq_name": "ligand-dependent nuclear receptor-interacting factor 1 isoform X1", "refseq_ac": [ { "id": "XP_689382", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_689382", "type": "external" } ], "gene_names_uniprotkb": "lrif1", "gene_names_refseq": "lrif1", "protein_names_uniprotkb": "Ligand-dependent nuclear receptor-interacting factor 1 isoform X1", "protein_names_refseq": "ligand-dependent nuclear receptor-interacting factor 1 isoform X1", "tax_id": 7955, "disease": "facioscapulohumeral muscular dystrophy 3 (Disease Ontology:DOID:0060917)", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133183) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Aug 1, 2013 this sequence version replaced XP_689382.3. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8N7UV65", "ec_number_list": [], "go_molecular_function": "GO:0042974 nuclear retinoic acid receptor binding", "go_cellular_component": "", "go_biological_process": "GO:0006355 regulation of DNA-templated transcription;GO:0060348 bone development", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7F853-1", "record_type": "protein", "filter_code": "0000000.0000010.010000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F859-1", "uniprot_id": [ { "id": "E7F859_DANRE", "url": "https://www.uniprot.org/uniprot/E7F859", "type": "external" } ], "mass": 94022.0, "length": 834, "protein_name": "E3 ubiquitin-protein ligase RNF216", "gene_name": "rnf216", "organism": "Zebrafish", "refseq_name": "E3 ubiquitin-protein ligase RNF216", "refseq_ac": [ { "id": "XP_068075439", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_068075439", "type": "external" } ], "gene_names_uniprotkb": "rnf216", "gene_names_refseq": "rnf216", "protein_names_uniprotkb": "E3 ubiquitin-protein ligase RNF216", "protein_names_refseq": "E3 ubiquitin-protein ligase RNF216", "tax_id": 7955, "disease": "Gordon Holmes syndrome (Disease Ontology:DOID:0111587)", "pathway": " (dre:559441)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133178) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0A8N7TEK8", "ec_number_list": [], "go_molecular_function": "GO:0008270 zinc ion binding;GO:0016740 transferase activity", "go_cellular_component": "", "go_biological_process": "GO:0021549 cerebellum development;GO:0043010 camera-type eye development", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7F859-1", "record_type": "protein", "filter_code": "0000000.0000011.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F871-1", "uniprot_id": [ { "id": "E7F871_DANRE", "url": "https://www.uniprot.org/uniprot/E7F871", "type": "external" } ], "mass": 106943.0, "length": 958, "protein_name": "Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1 isoform X1", "gene_name": "LOC100005008", "organism": "Zebrafish", "refseq_name": "arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1 isoform X1", "refseq_ac": [ { "id": "XP_068072258", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_068072258", "type": "external" } ], "gene_names_uniprotkb": "LOC100005008", "gene_names_refseq": "LOC100005008", "protein_names_uniprotkb": "Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1 isoform X1", "protein_names_refseq": "arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:100005008); (R-DRE-8849469); (R-DRE-8980692); (R-DRE-9013148); (R-DRE-9013149)", "pathway_count": 5, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133196) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1Q7V0", "ec_number_list": [], "go_molecular_function": "GO:0005096 GTPase activator activity;GO:0005547 phosphatidylinositol-3,4,5-trisphosphate binding;GO:0008270 zinc ion binding", "go_cellular_component": "GO:0005737 cytoplasm", "go_biological_process": "GO:0031344 regulation of cell projection organization;GO:0007165 signal transduction;GO:0032956 regulation of actin cytoskeleton organization", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7F871-1", "record_type": "protein", "filter_code": "0000000.0000001.010000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F888-1", "uniprot_id": [ { "id": "ARI5B_DANRE", "url": "https://www.uniprot.org/uniprot/E7F888", "type": "external" } ], "mass": 115806.0, "length": 1044, "protein_name": "AT-rich interactive domain-containing protein 5B", "gene_name": "arid5b", "organism": "Zebrafish", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "arid5b", "gene_names_refseq": "", "protein_names_uniprotkb": "AT-rich interactive domain-containing protein 5B; ARID domain-containing protein 5B", "protein_names_refseq": "", "tax_id": 7955, "disease": "", "pathway": " (R-DRE-3214842)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "23594743", "class_list": "", "function": "Transcription coactivator that binds to the 5'-AATA[CT]-3' core sequence and plays a key role in adipogenesis and liver development. Required for adipogenesis: regulates triglyceride metabolism in adipocytes by regulating expression of adipogenic genes (By similarity)., [UniProtKB]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0003713 transcription coactivator activity;GO:0000976 transcription cis-regulatory region binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006357 regulation of transcription by RNA polymerase II;GO:0060612 adipose tissue development", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "E7F888-1", "record_type": "protein", "filter_code": "0000000.0000101.010000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F897-1", "uniprot_id": [ { "id": "E7F897_DANRE", "url": "https://www.uniprot.org/uniprot/E7F897", "type": "external" } ], "mass": 49140.0, "length": 424, "protein_name": "3.4.17.20; Carboxypeptidase B2 precursor", "gene_name": "cpb2", "organism": "Zebrafish", "refseq_name": "carboxypeptidase B2 precursor", "refseq_ac": [ { "id": "NP_001018539", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001018539", "type": "external" } ], "gene_names_uniprotkb": "cpb2; zgc:112493", "gene_names_refseq": "cpb2; zgc:112493", "protein_names_uniprotkb": "3.4.17.20; Carboxypeptidase B2 precursor", "protein_names_refseq": "carboxypeptidase B2 precursor", "tax_id": 7955, "disease": "nephrotic syndrome (Disease Ontology:DOID:1184); Behcet's disease (Disease Ontology:DOID:13241); thrombocytosis (Disease Ontology:DOID:2228); chronic kidney disease (Disease Ontology:DOID:784); diabetes mellitus (Disease Ontology:DOID:9351); type 2 diabetes mellitus (Disease Ontology:DOID:9352); obesity (Disease Ontology:DOID:9970)", "pathway": " (dre:100000935); (R-DRE-2022377); (R-DRE-977606)", "pathway_count": 3, "publication_count": 5, "publication_id_list": "19200601;20885977;27189481;28982700;34619175", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GFIL01007013.1, SRR32588723.1653755.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505375 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000001.1. On or before Sep 30, 2007 this sequence version replaced XP_001341035.1, NP_001018539.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]; Cleaves C-terminal arginine or lysine residues from biologically active peptides such as kinins or anaphylatoxins in the circulation thereby regulating their activities. Down-regulates fibrinolysis by removing C-terminal lysine residues from fibrin that has already been partially degraded by plasmin., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 7, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1N6I8", "ec_number_list": [ { "id": "3.4.17.20", "url": "https://www.rhea-db.org/rhea/?query=ec:3.4.17.20", "type": "external" }, { "id": "3.4.17.2", "url": "https://www.rhea-db.org/rhea/?query=ec:3.4.17.2", "type": "external" } ], "go_molecular_function": "GO:0008270 zinc ion binding;GO:0004181 metallocarboxypeptidase activity;GO:0004180 carboxypeptidase activity", "go_cellular_component": "GO:0005615 extracellular space", "go_biological_process": "GO:0006508 proteolysis;GO:0042730 fibrinolysis", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "E7F897-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F8A9-1", "uniprot_id": [ { "id": "E7F8A9_DANRE", "url": "https://www.uniprot.org/uniprot/E7F8A9", "type": "external" } ], "mass": 81670.0, "length": 731, "protein_name": "Antigen peptide transporter 1", "gene_name": "tap1", "organism": "Zebrafish", "refseq_name": "antigen peptide transporter 1", "refseq_ac": [ { "id": "XP_002665053", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_002665053", "type": "external" } ], "gene_names_uniprotkb": "tap1", "gene_names_refseq": "tap1", "protein_names_uniprotkb": "Antigen peptide transporter 1; 7.4.2.14; ATP-binding cassette sub-family B member 2; Peptide transporter TAP1", "protein_names_refseq": "antigen peptide transporter 1", "tax_id": 7955, "disease": "open-angle glaucoma (Disease Ontology:DOID:1067); allergic disease (Disease Ontology:DOID:1205); diffuse scleroderma (Disease Ontology:DOID:1580); asthma (Disease Ontology:DOID:2841); pulmonary tuberculosis (Disease Ontology:DOID:2957); esophagus squamous cell carcinoma (Disease Ontology:DOID:3748); cervical cancer (Disease Ontology:DOID:4362); rhinitis (Disease Ontology:DOID:4483); schizophrenia (Disease Ontology:DOID:5419); reactive arthritis (Disease Ontology:DOID:6196); ankylosing spondylitis (Disease Ontology:DOID:7147); extrinsic allergic alveolitis (Disease Ontology:DOID:841); psoriasis (Disease Ontology:DOID:8893); bronchiectasis (Disease Ontology:DOID:9563); type 1 diabetes mellitus (Disease Ontology:DOID:9744)", "pathway": " (dre:100333043); (R-DRE-983170)", "pathway_count": 2, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133191) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 15, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1RMC7;A0AC58HLI0;A0AC58HLI6;A0AC58HLI8;A0AC58HLK7", "ec_number_list": [ { "id": "7.4.2.14", "url": "https://www.rhea-db.org/rhea/?query=ec:7.4.2.14", "type": "external" } ], "go_molecular_function": "GO:0005524 ATP binding;GO:0046872 metal ion binding;GO:0016887 ATP hydrolysis activity;GO:0015440 ABC-type peptide transporter activity;GO:0015433 ABC-type peptide antigen transporter activity", "go_cellular_component": "GO:0016020 membrane;GO:0005789 endoplasmic reticulum membrane", "go_biological_process": "GO:0015031 protein transport;GO:0055085 transmembrane transport;GO:0002250 adaptive immune response", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7F8A9-1", "record_type": "protein", "filter_code": "0000000.0000011.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F8B1-1", "uniprot_id": [ { "id": "E7F8B1_DANRE", "url": "https://www.uniprot.org/uniprot/E7F8B1", "type": "external" } ], "mass": 27668.0, "length": 242, "protein_name": "Brorin", "gene_name": "si:dkey-283b1.7", "organism": "Zebrafish", "refseq_name": "brorin", "refseq_ac": [ { "id": "XP_690886", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_690886", "type": "external" } ], "gene_names_uniprotkb": "si:dkey-283b1.7", "gene_names_refseq": "si:dkey-283b1.7", "protein_names_uniprotkb": "Brorin", "protein_names_refseq": "brorin", "tax_id": 7955, "disease": "", "pathway": " (dre:562406)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133178) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Feb 15, 2007 this sequence version replaced XP_690886.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8N7T7G6", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005615 extracellular space;GO:0045202 synapse;GO:0032281 AMPA glutamate receptor complex", "go_biological_process": "GO:0030514 negative regulation of BMP signaling pathway", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7F8B1-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F8C4-1", "uniprot_id": [ { "id": "E7F8C4_DANRE", "url": "https://www.uniprot.org/uniprot/E7F8C4", "type": "external" } ], "mass": 42384.0, "length": 377, "protein_name": "Proteinase-activated receptor 3", "gene_name": "LOC100333265", "organism": "Zebrafish", "refseq_name": "proteinase-activated receptor 3", "refseq_ac": [ { "id": "XP_002665915", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_002665915", "type": "external" } ], "gene_names_uniprotkb": "LOC100333265", "gene_names_refseq": "LOC100333265", "protein_names_uniprotkb": "Proteinase-activated receptor 3", "protein_names_refseq": "proteinase-activated receptor 3", "tax_id": 7955, "disease": "", "pathway": " (dre:100333265); (R-DRE-375276); (R-DRE-416476); (R-DRE-456926)", "pathway_count": 4, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133196) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Aug 1, 2013 this sequence version replaced XP_002665915.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1RML1", "ec_number_list": [], "go_molecular_function": "GO:0015057 thrombin-activated receptor activity;GO:0004930 G protein-coupled receptor activity", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "GO:0007186 G protein-coupled receptor signaling pathway;GO:0007596 blood coagulation", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7F8C4-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F8C7-1", "uniprot_id": [ { "id": "E7F8C7_DANRE", "url": "https://www.uniprot.org/uniprot/E7F8C7", "type": "external" } ], "mass": 54509.0, "length": 485, "protein_name": "BAR/IMD domain-containing adapter protein 2-like 1", "gene_name": "baiap2l1a", "organism": "Zebrafish", "refseq_name": "brain-specific angiogenesis inhibitor 1-associated protein 2-like protein 1a isoform X1", "refseq_ac": [ { "id": "XP_009304868", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009304868", "type": "external" } ], "gene_names_uniprotkb": "baiap2l1a; baiap2l1; cb1023; zgc:85624", "gene_names_refseq": "baiap2l1a; baiap2l1; cb1023; zgc:85624", "protein_names_uniprotkb": "BAR/IMD domain-containing adapter protein 2-like 1; Brain-specific angiogenesis inhibitor 1-associated protein 2-like protein 1", "protein_names_refseq": "brain-specific angiogenesis inhibitor 1-associated protein 2-like protein 1a isoform X1", "tax_id": 7955, "disease": "", "pathway": " (R-DRE-9013149); (R-DRE-9013404); (R-DRE-9013423); (R-DRE-9035034)", "pathway_count": 4, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133187) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]; May function as adapter protein. Involved in the formation of clusters of actin bundles. Plays a role in the reorganization of the actin cytoskeleton in response to bacterial infection., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M3AYA0", "ec_number_list": [], "go_molecular_function": "GO:0003779 actin binding", "go_cellular_component": "GO:0005654 nucleoplasm;GO:0005829 cytosol;GO:0005856 cytoskeleton", "go_biological_process": "GO:0007009 plasma membrane organization;GO:0051017 actin filament bundle assembly;GO:0051764 actin crosslink formation;GO:0030838 positive regulation of actin filament polymerization", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7F8C7-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F8G8-1", "uniprot_id": [ { "id": "E7F8G8_DANRE", "url": "https://www.uniprot.org/uniprot/E7F8G8", "type": "external" } ], "mass": 15741.0, "length": 143, "protein_name": "Small ribosomal subunit protein uS12m", "gene_name": "mrps12", "organism": "Zebrafish", "refseq_name": "small ribosomal subunit protein uS12m", "refseq_ac": [ { "id": "NP_001373202", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001373202", "type": "external" } ], "gene_names_uniprotkb": "mrps12; si:dkey-17e16.10", "gene_names_refseq": "mrps12; si:dkey-17e16.10", "protein_names_uniprotkb": "Small ribosomal subunit protein uS12m; 28S ribosomal protein S12, mitochondrial", "protein_names_refseq": "small ribosomal subunit protein uS12m", "tax_id": 7955, "disease": "sensorineural hearing loss (Disease Ontology:DOID:10003); dilated cardiomyopathy (Disease Ontology:DOID:12930); epilepsy (Disease Ontology:DOID:1826); mitochondrial metabolism disease (Disease Ontology:DOID:700)", "pathway": " (dre:793878); (R-DRE-5389840); (R-DRE-5419276); (R-DRE-9937383)", "pathway_count": 4, "publication_count": 3, "publication_id_list": "26469318;27189481;27773705", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: CT612335.2, EH578252.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## ##RefSeq-Attributes-START## gene product(s) localized to mito. :: inferred from homology ##RefSeq-Attributes-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000021.1. On Aug 18, 2020 this sequence version replaced XP_009293709.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 4, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M3ATZ0", "ec_number_list": [], "go_molecular_function": "GO:0003735 structural constituent of ribosome", "go_cellular_component": "GO:0005763 mitochondrial small ribosomal subunit;GO:0005840 ribosome", "go_biological_process": "GO:0006412 translation", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "E7F8G8-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F8H3-1", "uniprot_id": [ { "id": "E7F8H3_DANRE", "url": "https://www.uniprot.org/uniprot/E7F8H3", "type": "external" } ], "mass": 25481.0, "length": 220, "protein_name": "Forkhead box L3", "gene_name": "foxl3", "organism": "Zebrafish", "refseq_name": "forkhead box L3", "refseq_ac": [ { "id": "NP_001182055", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001182055", "type": "external" } ], "gene_names_uniprotkb": "foxl3; foxl3-ot1; si:dkey-7e14.3", "gene_names_refseq": "foxl3-ot1; foxl3; si:dkey-7e14.3", "protein_names_uniprotkb": "Forkhead box L3", "protein_names_refseq": "forkhead box L1-like; forkhead box L3; foxl3 overlapping transcript 1", "tax_id": 7955, "disease": "", "pathway": " (dre:100003253)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "33871629;35588359", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: CT642664.2, GDQQ01068518.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA4476741, SAMEA4476745 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000012.1. On Aug 25, 2010 this sequence version replaced XP_001338798.2. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NX77", "ec_number_list": [], "go_molecular_function": "GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding;GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006357 regulation of transcription by RNA polymerase II;GO:0030154 cell differentiation;GO:0009888 tissue development;GO:0009653 anatomical structure morphogenesis", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "E7F8H3-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F8K8-1", "uniprot_id": [ { "id": "E7F8K8_DANRE", "url": "https://www.uniprot.org/uniprot/E7F8K8", "type": "external" } ], "mass": 28263.0, "length": 257, "protein_name": "Transmembrane protein 182", "gene_name": "tmem182b", "organism": "Zebrafish", "refseq_name": "transmembrane protein 182 isoform X1", "refseq_ac": [ { "id": "XP_005165925", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005165925", "type": "external" } ], "gene_names_uniprotkb": "tmem182b", "gene_names_refseq": "tmem182b", "protein_names_uniprotkb": "Transmembrane protein 182", "protein_names_refseq": "transmembrane protein 182 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:101887154)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133181) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M2BD90", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "GO:0007517 muscle organ development", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7F8K8-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F8M0-1", "uniprot_id": [ { "id": "E7F8M0_DANRE", "url": "https://www.uniprot.org/uniprot/E7F8M0", "type": "external" } ], "mass": 45601.0, "length": 410, "protein_name": "Sialic acid-binding Ig-like lectin 7", "gene_name": "LOC103910452", "organism": "Zebrafish", "refseq_name": "sialic acid-binding Ig-like lectin 7", "refseq_ac": [ { "id": "XP_017210804", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_017210804", "type": "external" } ], "gene_names_uniprotkb": "LOC103910452", "gene_names_refseq": "LOC103910452", "protein_names_uniprotkb": "Sialic acid-binding Ig-like lectin 7", "protein_names_refseq": "sialic acid-binding Ig-like lectin 7", "tax_id": 7955, "disease": "", "pathway": " (dre:103910452); (R-DRE-198933); (R-DRE-6798695)", "pathway_count": 3, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133179) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M6Z5K2", "ec_number_list": [], "go_molecular_function": "GO:0030246 carbohydrate binding;GO:0033691 sialic acid binding", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "GO:0007155 cell adhesion", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7F8M0-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F8N2-1", "uniprot_id": [ { "id": "E7F8N2_DANRE", "url": "https://www.uniprot.org/uniprot/E7F8N2", "type": "external" } ], "mass": 110488.0, "length": 1020, "protein_name": "Uncharacterized protein pear1", "gene_name": "pear1", "organism": "Zebrafish", "refseq_name": "uncharacterized protein pear1", "refseq_ac": [ { "id": "XP_700533", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_700533", "type": "external" } ], "gene_names_uniprotkb": "pear1", "gene_names_refseq": "pear1", "protein_names_uniprotkb": "Uncharacterized protein pear1", "protein_names_refseq": "uncharacterized protein pear1", "tax_id": 7955, "disease": "", "pathway": " (dre:571812); (R-DRE-381426); (R-DRE-8957275)", "pathway_count": 3, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133191) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Mar 30, 2010 this sequence version replaced XP_700533.3. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8N7T8P5;A0AC58HJP1;E9QG99", "ec_number_list": [], "go_molecular_function": "GO:0005044 scavenger receptor activity;GO:0005201 extracellular matrix structural constituent", "go_cellular_component": "GO:0005615 extracellular space;GO:0005886 plasma membrane;GO:0005604 basement membrane", "go_biological_process": "GO:0034446 substrate adhesion-dependent cell spreading", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7F8N2-1", "record_type": "protein", "filter_code": "0000000.0000001.010000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F8P5-1", "uniprot_id": [ { "id": "E7F8P5_DANRE", "url": "https://www.uniprot.org/uniprot/E7F8P5", "type": "external" } ], "mass": 91564.0, "length": 835, "protein_name": "Neurotrypsin", "gene_name": "si:ch73-127m5.1", "organism": "Zebrafish", "refseq_name": "neurotrypsin isoform X1", "refseq_ac": [ { "id": "XP_009305107", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009305107", "type": "external" } ], "gene_names_uniprotkb": "si:ch73-127m5.1", "gene_names_refseq": "si:ch73-127m5.1", "protein_names_uniprotkb": "Neurotrypsin; Serine protease 12", "protein_names_refseq": "neurotrypsin isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:799158)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133187) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]; Plays a role in neuronal plasticity and the proteolytic action may subserve structural reorganizations associated with learning and memory operations., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M3AYJ8", "ec_number_list": [], "go_molecular_function": "GO:0004252 serine-type endopeptidase activity", "go_cellular_component": "GO:0005576 extracellular region;GO:0016020 membrane", "go_biological_process": "GO:0006508 proteolysis", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7F8P5-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F8W7-1", "uniprot_id": [ { "id": "E7F8W7_DANRE", "url": "https://www.uniprot.org/uniprot/E7F8W7", "type": "external" } ], "mass": 96623.0, "length": 833, "protein_name": "FAST kinase domain-containing protein 1, mitochondrial", "gene_name": "fastkd1", "organism": "Zebrafish", "refseq_name": "FAST kinase domain-containing protein 1, mitochondrial", "refseq_ac": [ { "id": "NP_991192", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_991192", "type": "external" } ], "gene_names_uniprotkb": "fastkd1; zgc:77397", "gene_names_refseq": "fastkd1; zgc:77397", "protein_names_uniprotkb": "FAST kinase domain-containing protein 1, mitochondrial", "protein_names_refseq": "FAST kinase domain-containing protein 1, mitochondrial", "tax_id": 7955, "disease": "", "pathway": " (dre:100148546)", "pathway_count": 1, "publication_count": 3, "publication_id_list": "19941893;26235539;26469318", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GFIL01010319.1, GDQQ01023730.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505373 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000009.1. On Aug 6, 2010 this sequence version replaced NP_991192.1. Sequence Note: This RefSeq record was created from genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1PD17", "ec_number_list": [], "go_molecular_function": "GO:0003723 RNA binding;GO:0016301 kinase activity", "go_cellular_component": "GO:0005759 mitochondrial matrix;GO:0035770 ribonucleoprotein granule", "go_biological_process": "GO:0000963 mitochondrial RNA processing;GO:0044528 regulation of mitochondrial mRNA stability", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "E7F8W7-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F8Y7-1", "uniprot_id": [ { "id": "E7F8Y7_DANRE", "url": "https://www.uniprot.org/uniprot/E7F8Y7", "type": "external" } ], "mass": 37971.0, "length": 336, "protein_name": "Cystein proteinase inhibitor protein salarin", "gene_name": "si:dkey-239j18.3", "organism": "Zebrafish", "refseq_name": "procathepsin L-like", "refseq_ac": [ { "id": "XP_001341714", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_001341714", "type": "external" } ], "gene_names_uniprotkb": "si:dkey-239j18.3", "gene_names_refseq": "si:dkey-239j18.3", "protein_names_uniprotkb": "Cystein proteinase inhibitor protein salarin", "protein_names_refseq": "procathepsin L-like", "tax_id": 7955, "disease": "", "pathway": " (dre:100001785)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133187) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 9, 2008 this sequence version replaced XP_001341714.1. COMPLETENESS: full length., [RefSeq]; Inhibits papain and ficin (cysteine proteinases) but not trypsin (a serine proteinase)., [UniProtKB, UniProtKB]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1Q202", "ec_number_list": [], "go_molecular_function": "GO:0004197 cysteine-type endopeptidase activity;GO:0004869 cysteine-type endopeptidase inhibitor activity", "go_cellular_component": "GO:0005615 extracellular space;GO:0005764 lysosome", "go_biological_process": "GO:0051603 proteolysis involved in protein catabolic process", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7F8Y7-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F922-1", "uniprot_id": [ { "id": "E7F922_DANRE", "url": "https://www.uniprot.org/uniprot/E7F922", "type": "external" } ], "mass": 92962.0, "length": 849, "protein_name": "Protein FAM171A2", "gene_name": "fam171a2b", "organism": "Zebrafish", "refseq_name": "protein FAM171A2", "refseq_ac": [ { "id": "XP_001337555", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_001337555", "type": "external" } ], "gene_names_uniprotkb": "fam171a2b", "gene_names_refseq": "fam171a2b", "protein_names_uniprotkb": "Protein FAM171A2", "protein_names_refseq": "protein FAM171A2", "tax_id": 7955, "disease": "", "pathway": " (dre:797104)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133199) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Mar 30, 2010 this sequence version replaced XP_001337555.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1PZ45", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0016020 membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7F922-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F931-1", "uniprot_id": [ { "id": "E7F931_DANRE", "url": "https://www.uniprot.org/uniprot/E7F931", "type": "external" } ], "mass": 61786.0, "length": 537, "protein_name": "C2H2-type domain-containing protein", "gene_name": "LOC101885996", "organism": "Zebrafish", "refseq_name": "uncharacterized protein", "refseq_ac": [ { "id": "XP_068076611", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_068076611", "type": "external" } ], "gene_names_uniprotkb": "LOC101885996", "gene_names_refseq": "LOC101885996", "protein_names_uniprotkb": "C2H2-type domain-containing protein", "protein_names_refseq": "uncharacterized protein", "tax_id": 7955, "disease": "", "pathway": " (dre:101885996)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133179) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]; May be involved in transcriptional regulation., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M2BC64", "ec_number_list": [], "go_molecular_function": "GO:0008270 zinc ion binding;GO:0000977 RNA polymerase II transcription regulatory region sequence-specific DNA binding;GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0000122 negative regulation of transcription by RNA polymerase II;GO:0006351 DNA-templated transcription;GO:0006357 regulation of transcription by RNA polymerase II;GO:0045595 regulation of cell differentiation", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7F931-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F951-1", "uniprot_id": [ { "id": "E7F951_DANRE", "url": "https://www.uniprot.org/uniprot/E7F951", "type": "external" } ], "mass": 41849.0, "length": 373, "protein_name": "Neuropeptide Y receptor type 2", "gene_name": "npy2rl", "organism": "Zebrafish", "refseq_name": "neuropeptide Y receptor Y2, like", "refseq_ac": [ { "id": "NP_001314731", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001314731", "type": "external" } ], "gene_names_uniprotkb": "npy2rl; si:ch73-24a15.1; si:dkey-58j19.3", "gene_names_refseq": "npy2rl; si:ch73-24a15.1; si:dkey-58j19.3", "protein_names_uniprotkb": "Neuropeptide Y receptor type 2; NPY-Y2 receptor", "protein_names_refseq": "DreY2-2; Y2-2; neuropeptide Y receptor Y2, like", "tax_id": 7955, "disease": "alcohol dependence (Disease Ontology:DOID:0050741); nicotine dependence (Disease Ontology:DOID:0050742); peripheral artery disease (Disease Ontology:DOID:0050830); morbid obesity (Disease Ontology:DOID:11981); Huntington's disease (Disease Ontology:DOID:12858); major depressive disorder (Disease Ontology:DOID:1470); temporal lobe epilepsy (Disease Ontology:DOID:3328); obesity (Disease Ontology:DOID:9970); cocaine dependence (Disease Ontology:DOID:9975)", "pathway": " (dre:795311); (R-DRE-375276); (R-DRE-418594)", "pathway_count": 3, "publication_count": 5, "publication_id_list": "21855645;23483106;26318124;29225025;37525888", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GDQH01015934.1, GFIL01028510.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA4476733, SAMEA4476735 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000001.1. On May 26, 2016 this sequence version replaced XP_009304593.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 9, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1P3R9;A0AC58JFN6;A0AC58JFP2", "ec_number_list": [], "go_molecular_function": "GO:0042923 neuropeptide binding;GO:0001601 peptide YY receptor activity", "go_cellular_component": "GO:0005886 plasma membrane;GO:0005929 cilium", "go_biological_process": "GO:0007193 adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway;GO:0007218 neuropeptide signaling pathway", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "E7F951-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F983-1", "uniprot_id": [ { "id": "E7F983_DANRE", "url": "https://www.uniprot.org/uniprot/E7F983", "type": "external" } ], "mass": 322458.0, "length": 3023, "protein_name": "Uncharacterized protein akap12a", "gene_name": "akap12a", "organism": "Zebrafish", "refseq_name": "uncharacterized protein akap12a", "refseq_ac": [ { "id": "XP_005158666", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005158666", "type": "external" } ], "gene_names_uniprotkb": "akap12a", "gene_names_refseq": "akap12a", "protein_names_uniprotkb": "Uncharacterized protein akap12a", "protein_names_refseq": "uncharacterized protein akap12a", "tax_id": 7955, "disease": "juvenile myelomonocytic leukemia (Disease Ontology:DOID:0050458); colorectal carcinoma (Disease Ontology:DOID:0080199); chronic kidney disease (Disease Ontology:DOID:784)", "pathway": " (dre:101885554)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133192) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 3, "predicted_n_glycosites": 0, "predicted_o_glycosites": 3, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 3, "glyco_site_count": 3, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M2B513", "ec_number_list": [], "go_molecular_function": "GO:0005516 calmodulin binding;GO:0051018 protein kinase A binding", "go_cellular_component": "GO:0005737 cytoplasm;GO:0016020 membrane", "go_biological_process": "GO:0007165 signal transduction;GO:0090036 regulation of protein kinase C signaling;GO:0141156 cAMP/PKA signal transduction", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7F983-1", "record_type": "protein", "filter_code": "0000000.0000011.001000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F9B4-1", "uniprot_id": [ { "id": "E7F9B4_DANRE", "url": "https://www.uniprot.org/uniprot/E7F9B4", "type": "external" } ], "mass": 18720.0, "length": 165, "protein_name": "Epithelial membrane protein 3", "gene_name": "emp3a", "organism": "Zebrafish", "refseq_name": "epithelial membrane protein 3", "refseq_ac": [ { "id": "XP_021335574", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021335574", "type": "external" } ], "gene_names_uniprotkb": "emp3a", "gene_names_refseq": "emp3a", "protein_names_uniprotkb": "Epithelial membrane protein 3", "protein_names_refseq": "epithelial membrane protein 3", "tax_id": 7955, "disease": "", "pathway": " (dre:796607)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133186) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]; Probably involved in cell proliferation and cell-cell interactions., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M9QDT3;A0AC58GTY8;A0AC58GTZ0;A0AC58GTZ1;A0AC58GTZ2;A0AC58GTZ3;A0AC58GTZ4;A0AC58GTZ5;A0AC58GTZ7;A0AC58GTZ8;A0AC58GTZ9;A0AC58GU01;A0AC58GU03;A0AC58GU16;A0AC58GU17;A0AC58GU27", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7F9B4-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F9D1-1", "uniprot_id": [ { "id": "E7F9D1_DANRE", "url": "https://www.uniprot.org/uniprot/E7F9D1", "type": "external" } ], "mass": 43306.0, "length": 383, "protein_name": "Potassium channel subfamily K member", "gene_name": "kcnk3b", "organism": "Zebrafish", "refseq_name": "potassium channel subfamily K member 3", "refseq_ac": [ { "id": "XP_700001", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_700001", "type": "external" } ], "gene_names_uniprotkb": "kcnk3b", "gene_names_refseq": "kcnk3b", "protein_names_uniprotkb": "Potassium channel subfamily K member", "protein_names_refseq": "potassium channel subfamily K member 3", "tax_id": 7955, "disease": "primary pulmonary hypertension (Disease Ontology:DOID:14557)", "pathway": " (dre:571330)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133192) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Feb 15, 2007 this sequence version replaced XP_700001.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8N7T8F0", "ec_number_list": [], "go_molecular_function": "GO:0015271 outward rectifier potassium channel activity;GO:0022841 potassium ion leak channel activity;GO:0005252 open rectifier potassium channel activity", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "GO:0060047 heart contraction;GO:0071805 potassium ion transmembrane transport", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7F9D1-1", "record_type": "protein", "filter_code": "0000000.0000011.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F9F5-1", "uniprot_id": [ { "id": "E7F9F5_DANRE", "url": "https://www.uniprot.org/uniprot/E7F9F5", "type": "external" } ], "mass": 76064.0, "length": 666, "protein_name": "Thrombospondin-type laminin G domain and EAR repeat-containing protein", "gene_name": "tspearb", "organism": "Zebrafish", "refseq_name": "thrombospondin-type laminin G domain and EAR repeat-containing protein", "refseq_ac": [ { "id": "XP_682770", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_682770", "type": "external" } ], "gene_names_uniprotkb": "tspearb", "gene_names_refseq": "tspearb", "protein_names_uniprotkb": "Thrombospondin-type laminin G domain and EAR repeat-containing protein", "protein_names_refseq": "thrombospondin-type laminin G domain and EAR repeat-containing protein", "tax_id": 7955, "disease": "tooth agenesis (Disease Ontology:DOID:0050591); autosomal recessive nonsyndromic deafness 98 (Disease Ontology:DOID:0110540); ectodermal dysplasia 14 (Disease Ontology:DOID:0111662)", "pathway": " (dre:555223)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133184) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Feb 15, 2007 this sequence version replaced XP_682770.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 3, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8N7TAH3", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0032420 stereocilium", "go_biological_process": "GO:0007165 signal transduction;GO:0060349 bone morphogenesis;GO:0042481 regulation of odontogenesis", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7F9F5-1", "record_type": "protein", "filter_code": "0000000.0000011.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F9I6-1", "uniprot_id": [ { "id": "E7F9I6_DANRE", "url": "https://www.uniprot.org/uniprot/E7F9I6", "type": "external" } ], "mass": 44746.0, "length": 393, "protein_name": "Neuromedin-K receptor", "gene_name": "LOC100333270", "organism": "Zebrafish", "refseq_name": "neuromedin-K receptor", "refseq_ac": [ { "id": "XP_002666594", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_002666594", "type": "external" } ], "gene_names_uniprotkb": "LOC100333270", "gene_names_refseq": "LOC100333270", "protein_names_uniprotkb": "Neuromedin-K receptor; NK-3 receptor; Neurokinin B receptor; Tachykinin receptor 3", "protein_names_refseq": "neuromedin-K receptor", "tax_id": 7955, "disease": "", "pathway": " (dre:100333270)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133198) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1RL62", "ec_number_list": [], "go_molecular_function": "GO:0004995 tachykinin receptor activity", "go_cellular_component": "GO:0005886 plasma membrane;GO:0097225 sperm midpiece", "go_biological_process": "GO:1902093 positive regulation of flagellated sperm motility", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7F9I6-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F9J0-1", "uniprot_id": [ { "id": "E7F9J0_DANRE", "url": "https://www.uniprot.org/uniprot/E7F9J0", "type": "external" } ], "mass": 27797.0, "length": 246, "protein_name": "Fibroblast growth factor", "gene_name": "fgf11b", "organism": "Zebrafish", "refseq_name": "fibroblast growth factor 11", "refseq_ac": [ { "id": "XP_001920354", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_001920354", "type": "external" } ], "gene_names_uniprotkb": "fgf11b", "gene_names_refseq": "fgf11b", "protein_names_uniprotkb": "Fibroblast growth factor; FGF", "protein_names_refseq": "fibroblast growth factor 11", "tax_id": 7955, "disease": "", "pathway": " (dre:100149844)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133185) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Mar 23, 2011 this sequence version replaced XP_001920354.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1QQP9", "ec_number_list": [], "go_molecular_function": "GO:0017080 sodium channel regulator activity;GO:0008083 growth factor activity", "go_cellular_component": "GO:0005576 extracellular region;GO:0005634 nucleus;GO:0005737 cytoplasm", "go_biological_process": "GO:0022008 neurogenesis", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7F9J0-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F9J1-1", "uniprot_id": [ { "id": "E7F9J1_DANRE", "url": "https://www.uniprot.org/uniprot/E7F9J1", "type": "external" } ], "mass": 67858.0, "length": 618, "protein_name": "ATP-dependent clpX-like chaperone, mitochondrial", "gene_name": "clpxb", "organism": "Zebrafish", "refseq_name": "ATP-dependent clpX-like chaperone, mitochondrial", "refseq_ac": [ { "id": "XP_002667004", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_002667004", "type": "external" } ], "gene_names_uniprotkb": "clpxb", "gene_names_refseq": "clpxb", "protein_names_uniprotkb": "ATP-dependent clpX-like chaperone, mitochondrial; 3.6.4.10; ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial", "protein_names_refseq": "ATP-dependent clpX-like chaperone, mitochondrial", "tax_id": 7955, "disease": "erythropoietic protoporphyria (Disease Ontology:DOID:13270)", "pathway": " (dre:100332309); (R-DRE-9837999)", "pathway_count": 2, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133200) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Mar 23, 2011 this sequence version replaced XP_002667004.1. COMPLETENESS: full length., [RefSeq]; ATP-dependent chaperone that functions as an unfoldase. As part of the ClpXP protease complex, it recognizes specific protein substrates, unfolds them using energy derived from ATP hydrolysis, and then translocates them to the proteolytic subunit (CLPP) of the ClpXP complex for degradation. Thanks to its chaperone activity, it also functions in the incorporation of the pyridoxal phosphate cofactor into 5-aminolevulinate synthase, thereby activating 5-aminolevulinate (ALA) synthesis, the first step in heme biosynthesis. This chaperone is also involved in the control of mtDNA nucleoid distribution, by regulating mitochondrial transcription factor A (TFAM) activity., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1REI6", "ec_number_list": [ { "id": "2.3.2.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.2.-", "type": "external" }, { "id": "2.3.2.27", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.2.27", "type": "external" }, { "id": "3.6.4.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.4.-", "type": "external" }, { "id": "4.2.99.18", "url": "https://www.rhea-db.org/rhea/?query=ec:4.2.99.18", "type": "external" }, { "id": "5.6.2.4", "url": "https://www.rhea-db.org/rhea/?query=ec:5.6.2.4", "type": "external" }, { "id": "5.6.2.3", "url": "https://www.rhea-db.org/rhea/?query=ec:5.6.2.3", "type": "external" }, { "id": "3.6.4.12", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.4.12", "type": "external" }, { "id": "3.6.4.13", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.4.13", "type": "external" }, { "id": "2.7.4.3", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.4.3", "type": "external" }, { "id": "7.6.2.2", "url": "https://www.rhea-db.org/rhea/?query=ec:7.6.2.2", "type": "external" }, { "id": "5.6.1.6", "url": "https://www.rhea-db.org/rhea/?query=ec:5.6.1.6", "type": "external" }, { "id": "7.6.2.3", "url": "https://www.rhea-db.org/rhea/?query=ec:7.6.2.3", "type": "external" }, { "id": "3.6.1.5", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.1.5", "type": "external" }, { "id": "3.6.4.6", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.4.6", "type": "external" }, { "id": "3.6.1.15", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.1.15", "type": "external" }, { "id": "3.6.4.10", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.4.10", "type": "external" }, { "id": "1.2.4.1", "url": "https://www.rhea-db.org/rhea/?query=ec:1.2.4.1", "type": "external" }, { "id": "5.6.2.-", "url": "https://www.rhea-db.org/rhea/?query=ec:5.6.2.-", "type": "external" }, { "id": "1.2.4.2", "url": "https://www.rhea-db.org/rhea/?query=ec:1.2.4.2", "type": "external" }, { "id": "2.7.11.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.-", "type": "external" }, { "id": "2.7.7.7", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.7.7", "type": "external" }, { "id": "2.7.7.49", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.7.49", "type": "external" }, { "id": "5.6.2.5", "url": "https://www.rhea-db.org/rhea/?query=ec:5.6.2.5", "type": "external" }, { "id": "3.6.5.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.5.-", "type": "external" }, { "id": "2.3.1.9", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.1.9", "type": "external" }, { "id": "4.2.1.2", "url": "https://www.rhea-db.org/rhea/?query=ec:4.2.1.2", "type": "external" }, { "id": "3.6.1.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.1.-", "type": "external" }, { "id": "2.3.3.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.3.1", "type": "external" } ], "go_molecular_function": "GO:0005524 ATP binding;GO:0046872 metal ion binding;GO:0051082 unfolded protein binding;GO:0016887 ATP hydrolysis activity;GO:0008233 peptidase activity", "go_cellular_component": "GO:0005759 mitochondrial matrix;GO:0042645 mitochondrial nucleoid", "go_biological_process": "GO:0051603 proteolysis involved in protein catabolic process;GO:0009653 anatomical structure morphogenesis", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7F9J1-1", "record_type": "protein", "filter_code": "0000000.0000011.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F9K2-1", "uniprot_id": [ { "id": "E7F9K2_DANRE", "url": "https://www.uniprot.org/uniprot/E7F9K2", "type": "external" } ], "mass": 88201.0, "length": 770, "protein_name": "Hexosyltransferase", "gene_name": "chpfb", "organism": "Zebrafish", "refseq_name": "chondroitin sulfate synthase 2", "refseq_ac": [ { "id": "XP_001923418", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_001923418", "type": "external" } ], "gene_names_uniprotkb": "chpfb", "gene_names_refseq": "chpfb", "protein_names_uniprotkb": "Hexosyltransferase; 2.4.1.-", "protein_names_refseq": "chondroitin sulfate synthase 2", "tax_id": 7955, "disease": "", "pathway": " (dre:103911184)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133181) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1QHW1", "ec_number_list": [], "go_molecular_function": "GO:0047238 glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase activity", "go_cellular_component": "GO:0032580 Golgi cisterna membrane", "go_biological_process": "GO:0050650 chondroitin sulfate proteoglycan biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7F9K2-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F9K6-1", "uniprot_id": [ { "id": "E7F9K6_DANRE", "url": "https://www.uniprot.org/uniprot/E7F9K6", "type": "external" } ], "mass": 46165.0, "length": 416, "protein_name": "Fibulin-7-like precursor", "gene_name": "si:dkey-234i14.3", "organism": "Zebrafish", "refseq_name": "fibulin-7-like precursor", "refseq_ac": [ { "id": "NP_001373587", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001373587", "type": "external" } ], "gene_names_uniprotkb": "si:dkey-234i14.3", "gene_names_refseq": "si:dkey-234i14.3", "protein_names_uniprotkb": "Fibulin-7-like precursor", "protein_names_refseq": "fibulin-7-like precursor", "tax_id": 7955, "disease": "", "pathway": " (dre:100329793)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "21873635;26469318", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: EE700471.1, SRR32588733.1382712.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA4476777, SAMEA4476790 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000025.1. On Aug 29, 2020 this sequence version replaced XP_017209808.2., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M6Z4J8", "ec_number_list": [], "go_molecular_function": "GO:0005509 calcium ion binding", "go_cellular_component": "GO:0005615 extracellular space;GO:0031012 extracellular matrix", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "E7F9K6-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F9K9-1", "uniprot_id": [ { "id": "E7F9K9_DANRE", "url": "https://www.uniprot.org/uniprot/E7F9K9", "type": "external" } ], "mass": 68060.0, "length": 598, "protein_name": "Sentrin-specific protease 2", "gene_name": "senp2", "organism": "Zebrafish", "refseq_name": "sentrin-specific protease 2", "refseq_ac": [ { "id": "XP_684283", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_684283", "type": "external" } ], "gene_names_uniprotkb": "senp2", "gene_names_refseq": "senp2", "protein_names_uniprotkb": "Sentrin-specific protease 2", "protein_names_refseq": "sentrin-specific protease 2", "tax_id": 7955, "disease": "", "pathway": " (dre:556400); (R-DRE-3065679)", "pathway_count": 2, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133181) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Feb 15, 2007 this sequence version replaced XP_684283.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8N7UST5", "ec_number_list": [], "go_molecular_function": "GO:0016929 deSUMOylase activity", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006508 proteolysis;GO:0016926 protein desumoylation;GO:0080090 regulation of primary metabolic process;GO:0060255 regulation of macromolecule metabolic process", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7F9K9-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F9R5-1", "uniprot_id": [ { "id": "E7F9R5_DANRE", "url": "https://www.uniprot.org/uniprot/E7F9R5", "type": "external" } ], "mass": 53236.0, "length": 465, "protein_name": "cyclin-dependent kinase", "gene_name": "cdk18", "organism": "Zebrafish", "refseq_name": "cyclin-dependent kinase 18", "refseq_ac": [ { "id": "XP_001919335", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_001919335", "type": "external" } ], "gene_names_uniprotkb": "cdk18", "gene_names_refseq": "cdk18", "protein_names_uniprotkb": "cyclin-dependent kinase; 2.7.11.22", "protein_names_refseq": "cyclin-dependent kinase 18", "tax_id": 7955, "disease": "", "pathway": " (dre:100150007)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133186) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Mar 23, 2011 this sequence version replaced XP_001919335.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1QH83", "ec_number_list": [ { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.7.11.13", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.13", "type": "external" }, { "id": "2.7.11.25", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.25", "type": "external" }, { "id": "2.7.10.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.1", "type": "external" }, { "id": "2.7.11.22", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.22", "type": "external" }, { "id": "2.7.11.21", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.21", "type": "external" }, { "id": "2.7.11.17", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.17", "type": "external" }, { "id": "2.7.12.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.1", "type": "external" }, { "id": "2.7.12.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.2", "type": "external" }, { "id": "2.7.11.24", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.24", "type": "external" }, { "id": "2.7.10.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.2", "type": "external" }, { "id": "2.7.11.23", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.23", "type": "external" }, { "id": "2.7.1.150", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.150", "type": "external" }, { "id": "2.7.11.12", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.12", "type": "external" }, { "id": "2.7.11.39", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.39", "type": "external" }, { "id": "2.7.11.11", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.11", "type": "external" }, { "id": "2.7.1.153", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.153", "type": "external" }, { "id": "2.7.1.137", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.137", "type": "external" }, { "id": "2.7.1.154", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.154", "type": "external" }, { "id": "2.7.11.26", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.26", "type": "external" }, { "id": "2.7.11.31", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.31", "type": "external" } ], "go_molecular_function": "GO:0005524 ATP binding;GO:0004693 cyclin-dependent protein serine/threonine kinase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0000307 cyclin-dependent protein kinase holoenzyme complex", "go_biological_process": "GO:1901987 regulation of cell cycle phase transition", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7F9R5-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F9U2-1", "uniprot_id": [ { "id": "E7F9U2_DANRE", "url": "https://www.uniprot.org/uniprot/E7F9U2", "type": "external" } ], "mass": 58503.0, "length": 521, "protein_name": "Gasdermin-E", "gene_name": "gsdmea", "organism": "Zebrafish", "refseq_name": "gasdermin-E", "refseq_ac": [ { "id": "XP_005170134", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005170134", "type": "external" } ], "gene_names_uniprotkb": "gsdmea", "gene_names_refseq": "gsdmea", "protein_names_uniprotkb": "Gasdermin-E", "protein_names_refseq": "gasdermin-E", "tax_id": 7955, "disease": "autosomal dominant nonsyndromic deafness 5 (Disease Ontology:DOID:0110575); sensorineural hearing loss (Disease Ontology:DOID:10003); lung adenocarcinoma (Disease Ontology:DOID:3910)", "pathway": " (dre:101884911)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133194) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 3, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M2BHG9", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005737 cytoplasm;GO:0012505 endomembrane system", "go_biological_process": "GO:0070269 pyroptotic inflammatory response;GO:0012501 programmed cell death", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7F9U2-1", "record_type": "protein", "filter_code": "0000000.0000011.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F9W7-1", "uniprot_id": [ { "id": "E7F9W7_DANRE", "url": "https://www.uniprot.org/uniprot/E7F9W7", "type": "external" } ], "mass": 44280.0, "length": 400, "protein_name": "Pyruvate dehydrogenase E1 component subunit alpha", "gene_name": "pdha1b", "organism": "Zebrafish", "refseq_name": "pyruvate dehydrogenase E1 subunit alpha 1b isoform X1", "refseq_ac": [ { "id": "XP_005162743", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005162743", "type": "external" } ], "gene_names_uniprotkb": "pdha1b; Pdha1; fp73b04; wu:fp73b04; zgc:92705", "gene_names_refseq": "Pdha1; fp73b04; pdha1b; wu:fp73b04; zgc:92705", "protein_names_uniprotkb": "Pyruvate dehydrogenase E1 component subunit alpha; 1.2.4.1", "protein_names_refseq": "pyruvate dehydrogenase E1 subunit alpha 1b isoform X1", "tax_id": 7955, "disease": "pyruvate decarboxylase deficiency (Disease Ontology:DOID:3649)", "pathway": " (R-DRE-204174); (R-DRE-5362517); (R-DRE-9861559)", "pathway_count": 3, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133199) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M2B9P1", "ec_number_list": [ { "id": "2.7.11.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.-", "type": "external" }, { "id": "1.2.4.1", "url": "https://www.rhea-db.org/rhea/?query=ec:1.2.4.1", "type": "external" }, { "id": "2.3.1.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.1.-", "type": "external" } ], "go_molecular_function": "GO:0046872 metal ion binding;GO:0004739 pyruvate dehydrogenase (acetyl-transferring) activity", "go_cellular_component": "GO:0005739 mitochondrion;GO:0005759 mitochondrial matrix;GO:0045254 pyruvate dehydrogenase complex", "go_biological_process": "GO:0006006 glucose metabolic process;GO:0006086 pyruvate decarboxylation to acetyl-CoA", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7F9W7-1", "record_type": "protein", "filter_code": "0000000.0000011.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7F9Z5-1", "uniprot_id": [ { "id": "E7F9Z5_DANRE", "url": "https://www.uniprot.org/uniprot/E7F9Z5", "type": "external" } ], "mass": 98258.0, "length": 894, "protein_name": "Nuclear factor of activated T-cells, cytoplasmic 2", "gene_name": "nfatc2a", "organism": "Zebrafish", "refseq_name": "nuclear factor of activated T-cells, cytoplasmic 2", "refseq_ac": [ { "id": "XP_003201273", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003201273", "type": "external" } ], "gene_names_uniprotkb": "nfatc2a", "gene_names_refseq": "nfatc2a", "protein_names_uniprotkb": "Nuclear factor of activated T-cells, cytoplasmic 2", "protein_names_refseq": "nuclear factor of activated T-cells, cytoplasmic 2", "tax_id": 7955, "disease": "", "pathway": " (dre:100333254); (R-DRE-2871809); (R-DRE-5607763)", "pathway_count": 3, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133198) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Aug 1, 2013 this sequence version replaced XP_003201273.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1RTJ1", "ec_number_list": [], "go_molecular_function": "GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding;GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005667 transcription regulator complex", "go_biological_process": "GO:0060429 epithelium development;GO:0006351 DNA-templated transcription;GO:0007399 nervous system development;GO:0045944 positive regulation of transcription by RNA polymerase II;GO:0009653 anatomical structure morphogenesis", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7F9Z5-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7FA55-1", "uniprot_id": [ { "id": "E7FA55_DANRE", "url": "https://www.uniprot.org/uniprot/E7FA55", "type": "external" } ], "mass": 60252.0, "length": 523, "protein_name": "Uncharacterized protein si:ch211-282j17.13", "gene_name": "si:ch211-282j17.13", "organism": "Zebrafish", "refseq_name": "uncharacterized protein si:ch211-282j17.13", "refseq_ac": [ { "id": "XP_001334403", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_001334403", "type": "external" } ], "gene_names_uniprotkb": "si:ch211-282j17.13", "gene_names_refseq": "si:ch211-282j17.13", "protein_names_uniprotkb": "Uncharacterized protein si:ch211-282j17.13", "protein_names_refseq": "uncharacterized protein si:ch211-282j17.13", "tax_id": 7955, "disease": "", "pathway": " (dre:794438)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133182) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Aug 1, 2013 this sequence version replaced XP_001334403.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A0G2LB41;A0A8M1PRY6", "ec_number_list": [], "go_molecular_function": "GO:0060090 molecular adaptor activity;GO:0003924 GTPase activity;GO:0005525 GTP binding", "go_cellular_component": "GO:0005940 septin ring;GO:0015630 microtubule cytoskeleton;GO:0031105 septin complex;GO:0032153 cell division site", "go_biological_process": "GO:0008104 intracellular protein localization;GO:0061640 cytoskeleton-dependent cytokinesis", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7FA55-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7FA56-1", "uniprot_id": [ { "id": "E7FA56_DANRE", "url": "https://www.uniprot.org/uniprot/E7FA56", "type": "external" } ], "mass": 19649.0, "length": 181, "protein_name": "Tubulin polymerization-promoting protein family member 2", "gene_name": "tppp2", "organism": "Zebrafish", "refseq_name": "tubulin polymerization-promoting protein family member 2", "refseq_ac": [ { "id": "NP_001313368", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001313368", "type": "external" } ], "gene_names_uniprotkb": "tppp2", "gene_names_refseq": "tppp2", "protein_names_uniprotkb": "Tubulin polymerization-promoting protein family member 2", "protein_names_refseq": "tppp3l; tubulin polymerization-promoting protein family member 2; zmp:0000001064", "tax_id": 7955, "disease": "", "pathway": " (dre:559490)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "24513284;25576359;26469318;27189481;28252024", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: SRR32588719.11784807.1, GDQH01030653.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000005.1 and EH594009.1. On May 18, 2016 this sequence version replaced XP_687926.1. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1P7Y2", "ec_number_list": [], "go_molecular_function": "GO:0015631 tubulin binding", "go_cellular_component": "GO:0005737 cytoplasm", "go_biological_process": "GO:0046785 microtubule polymerization;GO:0048675 axon extension;GO:0001578 microtubule bundle formation;GO:0032273 positive regulation of protein polymerization", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "E7FA56-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7FA60-1", "uniprot_id": [ { "id": "E7FA60_DANRE", "url": "https://www.uniprot.org/uniprot/E7FA60", "type": "external" } ], "mass": 21051.0, "length": 201, "protein_name": "Mitochondrial import inner membrane translocase subunit TIM22", "gene_name": "timm22", "organism": "Zebrafish", "refseq_name": "mitochondrial import inner membrane translocase subunit Tim22", "refseq_ac": [ { "id": "NP_001373736", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001373736", "type": "external" } ], "gene_names_uniprotkb": "timm22", "gene_names_refseq": "timm22", "protein_names_uniprotkb": "Mitochondrial import inner membrane translocase subunit TIM22", "protein_names_refseq": "mitochondrial import inner membrane translocase subunit Tim22", "tax_id": 7955, "disease": "combined oxidative phosphorylation deficiency 43 (Disease Ontology:DOID:0112116)", "pathway": " (dre:100537779); (R-DRE-1268020)", "pathway_count": 2, "publication_count": 2, "publication_id_list": "27086301;27189481", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: EH574564.1, EH535165.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## ##RefSeq-Attributes-START## gene product(s) localized to mito. :: inferred from homology ##RefSeq-Attributes-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000005.1. On Sep 5, 2020 this sequence version replaced XP_003198763.1., [RefSeq]; Essential core component of the TIM22 complex, a complex that mediates the import and insertion of multi-pass transmembrane proteins into the mitochondrial inner membrane. In the TIM22 complex, it constitutes the voltage-activated and signal-gated channel. Forms a twin-pore translocase that uses the membrane potential as external driving force in 2 voltage-dependent steps., [UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1RLZ2", "ec_number_list": [], "go_molecular_function": "GO:0008320 protein transmembrane transporter activity;GO:0030943 mitochondrion targeting sequence binding", "go_cellular_component": "GO:0042721 TIM22 mitochondrial import inner membrane insertion complex", "go_biological_process": "GO:0045039 protein insertion into mitochondrial inner membrane", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "E7FA60-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7FA97-1", "uniprot_id": [ { "id": "E7FA97_DANRE", "url": "https://www.uniprot.org/uniprot/E7FA97", "type": "external" } ], "mass": 56713.0, "length": 516, "protein_name": "Forkhead box protein G1", "gene_name": "foxj2", "organism": "Zebrafish", "refseq_name": "forkhead box protein J2", "refseq_ac": [ { "id": "XP_686801", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_686801", "type": "external" } ], "gene_names_uniprotkb": "foxj2", "gene_names_refseq": "foxj2", "protein_names_uniprotkb": "Forkhead box protein G1", "protein_names_refseq": "forkhead box protein J2", "tax_id": 7955, "disease": "", "pathway": " (dre:558490)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133191) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Mar 30, 2010 this sequence version replaced XP_686801.3. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8N7TEH4", "ec_number_list": [], "go_molecular_function": "GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding;GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006357 regulation of transcription by RNA polymerase II", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7FA97-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7FAA1-1", "uniprot_id": [ { "id": "E7FAA1_DANRE", "url": "https://www.uniprot.org/uniprot/E7FAA1", "type": "external" } ], "mass": 16651.0, "length": 149, "protein_name": "LITAF domain-containing protein", "gene_name": "si:ch211-157c3.4", "organism": "Zebrafish", "refseq_name": "lITAF domain-containing protein", "refseq_ac": [ { "id": "NP_001157840", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001157840", "type": "external" } ], "gene_names_uniprotkb": "si:ch211-157c3.4; fb12c06; fb52f02; wu:fb12c06; wu:fb52f02", "gene_names_refseq": "fb12c06; fb52f02; litafd; si:ch211-157c3.4; wu:fb12c06; wu:fb52f02", "protein_names_uniprotkb": "LITAF domain-containing protein", "protein_names_refseq": "lITAF domain-containing protein; lipopolysaccharide-induced tumor necrosis factor-alpha factor-like", "tax_id": 7955, "disease": "", "pathway": " (dre:561592)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "26469318", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: CK682349.1, SRR26395062.949303.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505374 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000003.1. On Aug 26, 2009 this sequence version replaced XP_687293.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NS23;A0AC58IVS8;A0AC58IVT3", "ec_number_list": [], "go_molecular_function": "GO:0008270 zinc ion binding", "go_cellular_component": "GO:0005634 nucleus;GO:0098574 cytoplasmic side of lysosomal membrane;GO:0098560 cytoplasmic side of late endosome membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "E7FAA1-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7FAB1-1", "uniprot_id": [ { "id": "E7FAB1_DANRE", "url": "https://www.uniprot.org/uniprot/E7FAB1", "type": "external" } ], "mass": 23094.0, "length": 211, "protein_name": "Uncharacterized protein LOC322379 precursor", "gene_name": "tfpil", "organism": "Zebrafish", "refseq_name": "uncharacterized protein LOC322379 precursor", "refseq_ac": [ { "id": "NP_001373281", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001373281", "type": "external" } ], "gene_names_uniprotkb": "tfpil; fb59d01s; fb59d01; wu:fb59d01s; wu:fb59d01", "gene_names_refseq": "fb59d01s; fb59d01; tfpil; wu:fb59d01s; wu:fb59d01", "protein_names_uniprotkb": "Uncharacterized protein LOC322379 precursor", "protein_names_refseq": "KU domain-containing protein; uncharacterized protein LOC322379 precursor", "tax_id": 7955, "disease": "", "pathway": " (dre:322379)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "26469318", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: EH508263.1, EH525574.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000010.1. On Aug 21, 2020 this sequence version replaced XP_003199322.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1RM79", "ec_number_list": [], "go_molecular_function": "GO:0004867 serine-type endopeptidase inhibitor activity;GO:0090729 toxin activity", "go_cellular_component": "GO:0005615 extracellular space", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "E7FAB1-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7FAC4-1", "uniprot_id": [ { "id": "E7FAC4_DANRE", "url": "https://www.uniprot.org/uniprot/E7FAC4", "type": "external" } ], "mass": 80610.0, "length": 714, "protein_name": "Protein PAT1 homolog 2 isoform X1", "gene_name": "patl2", "organism": "Zebrafish", "refseq_name": "protein PAT1 homolog 2 isoform X1", "refseq_ac": [ { "id": "XP_683261", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_683261", "type": "external" } ], "gene_names_uniprotkb": "patl2", "gene_names_refseq": "patl2", "protein_names_uniprotkb": "Protein PAT1 homolog 2 isoform X1", "protein_names_refseq": "protein PAT1 homolog 2 isoform X1", "tax_id": 7955, "disease": "ovarian disease (Disease Ontology:DOID:1100)", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133187) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Aug 1, 2013 this sequence version replaced XP_683261.3. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0A8N7USS0", "ec_number_list": [], "go_molecular_function": "GO:0003723 RNA binding", "go_cellular_component": "GO:0005634 nucleus;GO:0000932 P-body", "go_biological_process": "GO:0000290 deadenylation-dependent decapping of nuclear-transcribed mRNA;GO:0033962 P-body assembly", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7FAC4-1", "record_type": "protein", "filter_code": "0000000.0000010.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7FAC9-1", "uniprot_id": [ { "id": "E7FAC9_DANRE", "url": "https://www.uniprot.org/uniprot/E7FAC9", "type": "external" } ], "mass": 13414.0, "length": 130, "protein_name": "Membrane protein BRI3", "gene_name": "bri3", "organism": "Zebrafish", "refseq_name": "membrane protein BRI3", "refseq_ac": [ { "id": "NP_001186968", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001186968", "type": "external" } ], "gene_names_uniprotkb": "bri3; fc25e01; fc63g12; wu:fc25e01; wu:fc63g12", "gene_names_refseq": "bri3; fc25e01; fc63g12; wu:fc25e01; wu:fc63g12", "protein_names_uniprotkb": "Membrane protein BRI3; Brain protein I3", "protein_names_refseq": "membrane protein BRI3", "tax_id": 7955, "disease": "", "pathway": " (dre:100002236); (R-DRE-6798695)", "pathway_count": 2, "publication_count": 3, "publication_id_list": "25466900;26469318;27189481", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC066460.1, GFIL01002559.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000003.1 and BC066460.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NWM0", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0048471 perinuclear region of cytoplasm;GO:0005765 lysosomal membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "E7FAC9-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7FAJ7-1", "uniprot_id": [ { "id": "E7FAJ7_DANRE", "url": "https://www.uniprot.org/uniprot/E7FAJ7", "type": "external" } ], "mass": 52411.0, "length": 494, "protein_name": "Otolin 1b", "gene_name": "otol1b", "organism": "Zebrafish", "refseq_name": "otolin 1b precursor", "refseq_ac": [ { "id": "NP_001296385", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001296385", "type": "external" } ], "gene_names_uniprotkb": "otol1b; si:ch73-128c2.6", "gene_names_refseq": "otol1b; si:ch73-128c2.6", "protein_names_uniprotkb": "Otolin 1b", "protein_names_refseq": "Otolin1.3; otolin 1b precursor", "tax_id": 7955, "disease": "", "pathway": " (dre:572364)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "18222405;30840836", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: SRR32588718.4712951.1, SRR32588730.12229247.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA4476739, SAMEA4476774 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000015.1. On Jun 25, 2025 this sequence version replaced NP_001296385.1. Sequence Note: This RefSeq record was created from genomic sequence data because no single transcript was available for the full length of the gene. The extent of this transcript is supported by orthologous data., [RefSeq]", "predicted_glycosites": 2, "predicted_n_glycosites": 0, "predicted_o_glycosites": 2, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 2, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1P7N3", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "GO:0030198 extracellular matrix organization", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "E7FAJ7-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7FAM4-1", "uniprot_id": [ { "id": "G161A_DANRE", "url": "https://www.uniprot.org/uniprot/E7FAM4", "type": "external" } ], "mass": 57939.0, "length": 524, "protein_name": "G protein-coupled receptor 161B", "gene_name": "gpr161a", "organism": "Zebrafish", "refseq_name": "G-protein coupled receptor 161-like isoform X1", "refseq_ac": [ { "id": "XP_002662328", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_002662328", "type": "external" } ], "gene_names_uniprotkb": "gpr161a", "gene_names_refseq": "gpr161a", "protein_names_uniprotkb": "G protein-coupled receptor 161B", "protein_names_refseq": "G-protein coupled receptor 161-like isoform X1", "tax_id": 7955, "disease": "medulloblastoma (Disease Ontology:DOID:0050902)", "pathway": " (dre:100332121)", "pathway_count": 1, "publication_count": 3, "publication_id_list": "23594743;31884103;33531430", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133181) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]; G protein-coupled receptor that acts as a key inhibitor of the smoothened signaling pathway in primary cilia (PubMed:33531430). Inhibits the smoothened signaling pathway in absence of hedgehog (DHH, IHH or SHH) by promoting formation of the transcription repressor form of GLI2 and GLI3 transcription factors (By similarity). GPR161 activation triggers signaling via guanine nucleotide-binding protein G(s)/GNAS, mediating activation of adenylate cyclase activity and production of cAMP (PubMed:33531430). Increased cAMP levels activate PKA, promoting PKA-dependent processing of GLI2 and GLI3 transcription factors, leading to formation of transcription repressor GLI2R and GLI3R, which repress expression of target genes (PubMed:33531430). In presence of hedgehog, GPR161 is removed from primary cilia by smoothened (SMO), preventing its activity and allowing activation of the smoothened signaling (By similarity). In contrast to the majority of G protein-coupled receptors, it is not activated by a ligand and it either acts as a constitutively active receptor or as a mechanosensitive receptor (By similarity)., [UniProtKB, UniProtKB, PubMed]", "predicted_glycosites": 4, "predicted_n_glycosites": 4, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 4, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1RK53", "ec_number_list": [], "go_molecular_function": "GO:0004930 G protein-coupled receptor activity", "go_cellular_component": "GO:0055037 recycling endosome;GO:0060170 ciliary membrane", "go_biological_process": "GO:0007189 adenylate cyclase-activating G protein-coupled receptor signaling pathway", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "E7FAM4-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0000000010000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7FAN3-1", "uniprot_id": [ { "id": "E7FAN3_DANRE", "url": "https://www.uniprot.org/uniprot/E7FAN3", "type": "external" } ], "mass": 86001.0, "length": 764, "protein_name": "Zinc finger protein 408", "gene_name": "znf408", "organism": "Zebrafish", "refseq_name": "zinc finger protein 408", "refseq_ac": [ { "id": "NP_001315204", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001315204", "type": "external" } ], "gene_names_uniprotkb": "znf408", "gene_names_refseq": "znf408", "protein_names_uniprotkb": "Zinc finger protein 408", "protein_names_refseq": "zinc finger protein 408; zmp:0000000586", "tax_id": 7955, "disease": "exudative vitreoretinopathy (Disease Ontology:DOID:0050535); retinitis pigmentosa 72 (Disease Ontology:DOID:0110395); exudative vitreoretinopathy 6 (Disease Ontology:DOID:0111410)", "pathway": " (dre:108004540)", "pathway_count": 1, "publication_count": 3, "publication_id_list": "23716654;27189481;32097476", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GFIL01024769.1, GDQH01024746.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA4476735, SAMEA4476740 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000007.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]; Data indicate that gene knockdown of znf408 showed defects in developing retinal and trunk vasculature., [RefSeq, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 3, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1P8Y9", "ec_number_list": [], "go_molecular_function": "GO:0008270 zinc ion binding;GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding;GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006355 regulation of DNA-templated transcription;GO:0061298 retina vasculature development in camera-type eye", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "E7FAN3-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7FAS3-1", "uniprot_id": [ { "id": "E7FAS3_DANRE", "url": "https://www.uniprot.org/uniprot/E7FAS3", "type": "external" } ], "mass": 22559.0, "length": 201, "protein_name": "ADP-ribosylation factor-related protein 1", "gene_name": "arfrp1", "organism": "Zebrafish", "refseq_name": "ADP-ribosylation factor-related protein 1 isoform X1", "refseq_ac": [ { "id": "XP_005166227", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005166227", "type": "external" } ], "gene_names_uniprotkb": "arfrp1; zgc:113118", "gene_names_refseq": "arfrp1; zgc:113118", "protein_names_uniprotkb": "ADP-ribosylation factor-related protein 1", "protein_names_refseq": "ADP-ribosylation factor-related protein 1 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (R-DRE-6811440)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133181) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]; Trans-Golgi-associated GTPase that regulates protein sorting. Controls the targeting of ARL1 and its effector to the trans-Golgi. Required for the lipidation of chylomicrons in the intestine and required for VLDL lipidation in the liver., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M2BDM9", "ec_number_list": [], "go_molecular_function": "GO:0003924 GTPase activity;GO:0005525 GTP binding;GO:0046872 metal ion binding", "go_cellular_component": "GO:0005794 Golgi apparatus;GO:0016020 membrane", "go_biological_process": "GO:0006886 intracellular protein transport;GO:0043001 Golgi to plasma membrane protein transport;GO:0034067 protein localization to Golgi apparatus", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7FAS3-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7FAU5-1", "uniprot_id": [ { "id": "E7FAU5_DANRE", "url": "https://www.uniprot.org/uniprot/E7FAU5", "type": "external" } ], "mass": 64573.0, "length": 587, "protein_name": "TOX high mobility group box family member 3 isoform X1", "gene_name": "tox3", "organism": "Zebrafish", "refseq_name": "TOX high mobility group box family member 3 isoform X1", "refseq_ac": [ { "id": "XP_005169075", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005169075", "type": "external" } ], "gene_names_uniprotkb": "tox3", "gene_names_refseq": "tox3", "protein_names_uniprotkb": "TOX high mobility group box family member 3 isoform X1", "protein_names_refseq": "TOX high mobility group box family member 3 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:555286)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133182) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 2, "predicted_n_glycosites": 0, "predicted_o_glycosites": 2, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 2, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M2BGB1", "ec_number_list": [], "go_molecular_function": "GO:0031490 chromatin DNA binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006357 regulation of transcription by RNA polymerase II", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7FAU5-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7FAV9-1", "uniprot_id": [ { "id": "E7FAV9_DANRE", "url": "https://www.uniprot.org/uniprot/E7FAV9", "type": "external" } ], "mass": 113923.0, "length": 1001, "protein_name": "RNA helicase", "gene_name": "mov10a", "organism": "Zebrafish", "refseq_name": "putative helicase mov-10-B.1 isoform X1", "refseq_ac": [ { "id": "XP_002662576", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_002662576", "type": "external" } ], "gene_names_uniprotkb": "mov10a", "gene_names_refseq": "mov10a", "protein_names_uniprotkb": "RNA helicase; 3.6.4.13", "protein_names_refseq": "putative helicase mov-10-B.1 isoform X1", "tax_id": 7955, "disease": "hypertension (Disease Ontology:DOID:10763)", "pathway": " (dre:566858)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133181) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Mar 23, 2011 this sequence version replaced XP_002662576.1. COMPLETENESS: full length., [RefSeq]; Probable RNA helicase. Required for RNA-mediated gene silencing by the RNA-induced silencing complex (RISC). Required for both miRNA-mediated translational repression and miRNA-mediated cleavage of complementary mRNAs by RISC., [UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1RLW1", "ec_number_list": [ { "id": "2.3.2.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.2.-", "type": "external" }, { "id": "2.3.2.27", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.2.27", "type": "external" }, { "id": "3.6.4.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.4.-", "type": "external" }, { "id": "4.2.99.18", "url": "https://www.rhea-db.org/rhea/?query=ec:4.2.99.18", "type": "external" }, { "id": "5.6.2.4", "url": "https://www.rhea-db.org/rhea/?query=ec:5.6.2.4", "type": "external" }, { "id": "5.6.2.3", "url": "https://www.rhea-db.org/rhea/?query=ec:5.6.2.3", "type": "external" }, { "id": "3.6.4.12", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.4.12", "type": "external" }, { "id": "3.6.4.13", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.4.13", "type": "external" }, { "id": "2.7.4.3", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.4.3", "type": "external" }, { "id": "7.6.2.2", "url": "https://www.rhea-db.org/rhea/?query=ec:7.6.2.2", "type": "external" }, { "id": "5.6.1.6", "url": "https://www.rhea-db.org/rhea/?query=ec:5.6.1.6", "type": "external" }, { "id": "7.6.2.3", "url": "https://www.rhea-db.org/rhea/?query=ec:7.6.2.3", "type": "external" }, { "id": "3.6.1.5", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.1.5", "type": "external" }, { "id": "3.6.4.6", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.4.6", "type": "external" }, { "id": "3.6.1.15", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.1.15", "type": "external" }, { "id": "3.6.4.10", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.4.10", "type": "external" }, { "id": "5.6.2.-", "url": "https://www.rhea-db.org/rhea/?query=ec:5.6.2.-", "type": "external" }, { "id": "2.7.7.7", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.7.7", "type": "external" }, { "id": "2.7.7.49", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.7.49", "type": "external" }, { "id": "5.6.2.5", "url": "https://www.rhea-db.org/rhea/?query=ec:5.6.2.5", "type": "external" }, { "id": "3.6.5.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.5.-", "type": "external" }, { "id": "3.6.1.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.1.-", "type": "external" } ], "go_molecular_function": "GO:0003723 RNA binding;GO:0005524 ATP binding;GO:0016787 hydrolase activity;GO:0032574 5'-3' RNA helicase activity;GO:0004386 helicase activity", "go_cellular_component": "GO:0005829 cytosol;GO:0000932 P-body;GO:0043186 P granule", "go_biological_process": "GO:0035194 regulatory ncRNA-mediated post-transcriptional gene silencing", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7FAV9-1", "record_type": "protein", "filter_code": "0000000.0000011.010000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "E7FB26-1", "uniprot_id": [ { "id": "E7FB26_DANRE", "url": "https://www.uniprot.org/uniprot/E7FB26", "type": "external" } ], "mass": 42760.0, "length": 375, "protein_name": "ETS-related transcription factor Elf-3", "gene_name": "elf3", "organism": "Zebrafish", "refseq_name": "ETS-related transcription factor Elf-3", "refseq_ac": [ { "id": "XP_002666146", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_002666146", "type": "external" } ], "gene_names_uniprotkb": "elf3", "gene_names_refseq": "elf3", "protein_names_uniprotkb": "ETS-related transcription factor Elf-3", "protein_names_refseq": "ETS-related transcription factor Elf-3", "tax_id": 7955, "disease": "", "pathway": " (dre:560869); (R-DRE-1912408)", "pathway_count": 2, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133197) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1REB6", "ec_number_list": [], "go_molecular_function": "GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific;GO:0001228 DNA-binding transcription activator activity, RNA polymerase II-specific;GO:1990837 sequence-specific double-stranded DNA binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006357 regulation of transcription by RNA polymerase II;GO:0030154 cell differentiation;GO:0031175 neuron projection development;GO:0060536 cartilage morphogenesis", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "E7FB26-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q7SXB7-1", "uniprot_id": [ { "id": "S60A1_DANRE", "url": "https://www.uniprot.org/uniprot/Q7SXB7", "type": "external" } ], "mass": 57549.0, "length": 526, "protein_name": "Solute carrier family 60 member 1", "gene_name": "slc60a1a", "organism": "Zebrafish", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "slc60a1a; mfsd4a; mfsd4; zgc:66461", "gene_names_refseq": "", "protein_names_uniprotkb": "Solute carrier family 60 member 1; Major facilitator superfamily domain-containing protein 4A; Major facilitator superfamily domain-containing protein 4", "protein_names_refseq": "", "tax_id": 7955, "disease": "cholangiocarcinoma (Disease Ontology:DOID:4947)", "pathway": " (dre:393503)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0022857 transmembrane transporter activity", "go_cellular_component": "GO:0016020 membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q7SXB7-1", "record_type": "protein", "filter_code": "0000000.0000011.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1LUE5-1", "uniprot_id": [ { "id": "ZCH18_DANRE", "url": "https://www.uniprot.org/uniprot/Q1LUE5", "type": "external" } ], "mass": 129172.0, "length": 1148, "protein_name": "Zinc finger CCCH domain-containing protein 18", "gene_name": "zc3h18", "organism": "Zebrafish", "refseq_name": "zinc finger CCCH domain-containing protein 18", "refseq_ac": [ { "id": "NP_001037804", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001037804", "type": "external" } ], "gene_names_uniprotkb": "zc3h18; nhn1; si:ch211-218c6.1", "gene_names_refseq": "nhn1; si:ch211-218c6.1; zc3h18", "protein_names_uniprotkb": "Zinc finger CCCH domain-containing protein 18", "protein_names_refseq": "conserved nuclear protein Nhn1; zinc finger CCCH domain-containing protein 18", "tax_id": 7955, "disease": "", "pathway": " (dre:555770); (R-DRE-9930044)", "pathway_count": 2, "publication_count": 2, "publication_id_list": "18307296;23594743", "class_list": "", "function": "##Evidence-Data-START## RNAseq introns :: partial sample support SAMEA3505370, SAMEA3505371 [ECO:0000350] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000018.1. On Aug 25, 2006 this sequence version replaced XP_683477.1., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0008270 zinc ion binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "Q1LUE5-1", "record_type": "protein", "filter_code": "0000000.0000101.010000.000000000000000001.0000000001001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1L985-1", "uniprot_id": [ { "id": "Q1L985_DANRE", "url": "https://www.uniprot.org/uniprot/Q1L985", "type": "external" } ], "mass": 121328.0, "length": 1061, "protein_name": "3.4.24.61; Nardilysin b", "gene_name": "nrd1b", "organism": "Zebrafish", "refseq_name": "nardilysin b", "refseq_ac": [ { "id": "NP_001038180", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001038180", "type": "external" } ], "gene_names_uniprotkb": "nrd1b; nrd1; si:dkey-171o17.4", "gene_names_refseq": "nrd1b; nrd1; si:dkey-171o17.4", "protein_names_uniprotkb": "3.4.24.61; Nardilysin b", "protein_names_refseq": "nardilysin (N-arginine dibasic convertase); nardilysin b", "tax_id": 7955, "disease": "", "pathway": " (dre:557565)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "26469318", "class_list": "", "function": "##Evidence-Data-START## RNAseq introns :: partial sample support SAMEA4476730, SAMEA4476731 [ECO:0000350] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000022.1. On Jan 20, 2007 this sequence version replaced NP_001038180.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1N976", "ec_number_list": [], "go_molecular_function": "GO:0004222 metalloendopeptidase activity;GO:0046872 metal ion binding;GO:0008237 metallopeptidase activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005759 mitochondrial matrix", "go_biological_process": "GO:0006508 proteolysis", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q1L985-1", "record_type": "protein", "filter_code": "0000000.0000101.010000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1LU94-1", "uniprot_id": [ { "id": "Q1LU94_DANRE", "url": "https://www.uniprot.org/uniprot/Q1LU94", "type": "external" } ], "mass": 37152.0, "length": 348, "protein_name": "Transmembrane protein 64", "gene_name": "tmem64", "organism": "Zebrafish", "refseq_name": "transmembrane protein 64", "refseq_ac": [ { "id": "NP_001121723", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001121723", "type": "external" } ], "gene_names_uniprotkb": "tmem64; si:dkeyp-34f6.5", "gene_names_refseq": "si:dkeyp-34f6.5; tmem64", "protein_names_uniprotkb": "Transmembrane protein 64", "protein_names_refseq": "transmembrane protein 64", "tax_id": 7955, "disease": "", "pathway": " (dre:564172)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "27189481;39228401", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: ERR5059480.521911.1 [ECO:0000332] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000019.1. On Jul 31, 2008 this sequence version replaced XP_692613.3., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NH40", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005783 endoplasmic reticulum", "go_biological_process": "GO:0051480 regulation of cytosolic calcium ion concentration;GO:0045780 positive regulation of bone resorption;GO:0045672 positive regulation of osteoclast differentiation", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "Q1LU94-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1LV19-1", "uniprot_id": [ { "id": "SPKAP_DANRE", "url": "https://www.uniprot.org/uniprot/Q1LV19", "type": "external" } ], "mass": 174563.0, "length": 1596, "protein_name": "A-kinase anchor protein SPHKAP", "gene_name": "sphkap", "organism": "Zebrafish", "refseq_name": "A-kinase anchor protein SPHKAP", "refseq_ac": [ { "id": "NP_001076514", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001076514", "type": "external" } ], "gene_names_uniprotkb": "sphkap; si:dkey-223n17.6; si:dkey-99o15.1", "gene_names_refseq": "si:dkey-223n17.6; si:dkey-99o15.1; sphkap", "protein_names_uniprotkb": "A-kinase anchor protein SPHKAP; SPHK1-interactor and AKAP domain-containing protein", "protein_names_refseq": "A-kinase anchor protein SPHKAP; SPHK1-interactor and AKAP domain-containing protein", "tax_id": 7955, "disease": "", "pathway": " (dre:100034387)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "23594743", "class_list": "", "function": "##Evidence-Data-START## RNAseq introns :: partial sample support SAMEA3505390, SAMEA4476757 [ECO:0000350] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000018.1., [RefSeq]; Anchoring protein that mediates the subcellular compartmentation of cAMP-dependent protein kinase (PKA type II)., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0051018 protein kinase A binding", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005739 mitochondrion", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q1LV19-1", "record_type": "protein", "filter_code": "0000000.0000101.010000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q08BZ4-1", "uniprot_id": [ { "id": "MDH1B_DANRE", "url": "https://www.uniprot.org/uniprot/Q08BZ4", "type": "external" } ], "mass": 50272.0, "length": 447, "protein_name": "Putative malate dehydrogenase 1B", "gene_name": "mdh1b", "organism": "Zebrafish", "refseq_name": "putative malate dehydrogenase 1B", "refseq_ac": [ { "id": "NP_001070229", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001070229", "type": "external" } ], "gene_names_uniprotkb": "mdh1b; zgc:153922", "gene_names_refseq": "mdh1b; zgc:153922", "protein_names_uniprotkb": "Putative malate dehydrogenase 1B; 1.1.1.-", "protein_names_refseq": "putative malate dehydrogenase 1B", "tax_id": 7955, "disease": "", "pathway": " (dre:767794)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC124491.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN18715719 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC124491.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0030060 L-malate dehydrogenase (NAD+) activity;GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor;GO:0016615 malate dehydrogenase activity", "go_cellular_component": "", "go_biological_process": "GO:0006099 tricarboxylic acid cycle;GO:0006107 oxaloacetate metabolic process;GO:0019674 NAD+ metabolic process;GO:0006108 malate metabolic process", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q08BZ4-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q0VA82-1", "uniprot_id": [ { "id": "MFSD8_DANRE", "url": "https://www.uniprot.org/uniprot/Q0VA82", "type": "external" } ], "mass": 55486.0, "length": 504, "protein_name": "Major facilitator superfamily domain-containing protein 8", "gene_name": "mfsd8", "organism": "Zebrafish", "refseq_name": "major facilitator superfamily domain-containing protein 8", "refseq_ac": [ { "id": "NP_001038513", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001038513", "type": "external" } ], "gene_names_uniprotkb": "mfsd8; im:7139494; zgc:136865", "gene_names_refseq": "im:7139494; mfsd8; zgc:136865", "protein_names_uniprotkb": "Major facilitator superfamily domain-containing protein 8", "protein_names_refseq": "major facilitator superfamily domain-containing protein 8", "tax_id": 7955, "disease": "neuronal ceroid lipofuscinosis 7 (Disease Ontology:DOID:0110722)", "pathway": " (dre:564342)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC121197.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC121197.1. On Sep 1, 2006 this sequence version replaced XP_692774.1., [RefSeq]; May be a carrier that transport small solutes by using chemiosmotic ion gradients., [UniProtKB]", "predicted_glycosites": 2, "predicted_n_glycosites": 1, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 2, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0005254 chloride channel activity;GO:0015111 iodide transmembrane transporter activity;GO:0022857 transmembrane transporter activity", "go_cellular_component": "GO:0005765 lysosomal membrane;GO:0012505 endomembrane system", "go_biological_process": "GO:0097352 autophagosome maturation;GO:0007040 lysosome organization", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q0VA82-1", "record_type": "protein", "filter_code": "0000000.0000011.100000.000000000000000001.0000000011000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1ECW7-1", "uniprot_id": [ { "id": "S247A_DANRE", "url": "https://www.uniprot.org/uniprot/Q1ECW7", "type": "external" } ], "mass": 32158.0, "length": 294, "protein_name": "Solute carrier family 25 member 47-A", "gene_name": "slc25a47a", "organism": "Zebrafish", "refseq_name": "solute carrier family 25 member 47-A", "refseq_ac": [ { "id": "NP_001038779", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001038779", "type": "external" } ], "gene_names_uniprotkb": "slc25a47a; hdmcpa; slc25a47; zgc:136752", "gene_names_refseq": "hdmcpa; slc25a47a; slc25a47; zgc:136752", "protein_names_uniprotkb": "Solute carrier family 25 member 47-A; Hepatocellular carcinoma down-regulated mitochondrial carrier homolog A", "protein_names_refseq": "hepatocellular carcinoma down-regulated mitochondrial carrier homolog A; solute carrier family 25 member 47-A; solute carrier family 25, member 47", "tax_id": 7955, "disease": "", "pathway": " (dre:724009)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC117643.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505373, SAMEA3505377 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC117643.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0022857 transmembrane transporter activity", "go_cellular_component": "GO:0005739 mitochondrion;GO:0005743 mitochondrial inner membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q1ECW7-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "P0C7A6-1", "uniprot_id": [ { "id": "ABT3B_DANRE", "url": "https://www.uniprot.org/uniprot/P0C7A6", "type": "external" } ], "mass": 113196.0, "length": 1012, "protein_name": "Ankyrin repeat- and BTB/POZ domain-containing protein 3-B", "gene_name": "abtb3b; btbd11b", "organism": "Zebrafish", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "abtb3b; btbd11b; abtb3b; btbd11b; si:ch211-170d11.3; si:dkey-264l19.1", "gene_names_refseq": "", "protein_names_uniprotkb": "Ankyrin repeat- and BTB/POZ domain-containing protein 3-B; BTB/POZ domain-containing protein 11-B", "protein_names_refseq": "", "tax_id": 7955, "disease": "", "pathway": " (dre:100034519)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "23594743;25601102;25630924;26469318;27189481;27614751;28252024;35531980;35886872", "class_list": "", "function": "May support cell-type-specific synaptic function., [UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q1LVL9", "ec_number_list": [], "go_molecular_function": "GO:0046982 protein heterodimerization activity", "go_cellular_component": "GO:0016020 membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "P0C7A6-1", "record_type": "protein", "filter_code": "0000000.0000101.010000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1L987-1", "uniprot_id": [ { "id": "ATPF1_DANRE", "url": "https://www.uniprot.org/uniprot/Q1L987", "type": "external" } ], "mass": 34671.0, "length": 302, "protein_name": "ATP synthase mitochondrial F1 complex assembly factor 1", "gene_name": "atpaf1", "organism": "Zebrafish", "refseq_name": "ATP synthase mitochondrial F1 complex assembly factor 1", "refseq_ac": [ { "id": "NP_001017907", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001017907", "type": "external" } ], "gene_names_uniprotkb": "atpaf1; id:ibd1136; si:dkey-171o17.2; zgc:110583", "gene_names_refseq": "atpaf1; id:ibd1136; si:dkey-171o17.2; zgc:110583", "protein_names_uniprotkb": "ATP synthase mitochondrial F1 complex assembly factor 1", "protein_names_refseq": "ATP synthase mitochondrial F1 complex assembly factor 1", "tax_id": 7955, "disease": "", "pathway": " (dre:550606)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "23594743", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC092940.1, EH506633.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## ##RefSeq-Attributes-START## gene product(s) localized to mito. :: inferred from homology ##RefSeq-Attributes-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC092940.1. On Sep 28, 2011 this sequence version replaced NP_001017907.1., [RefSeq]; Has a complex stabilizing activity in the assembly of the mitochondrial F1-F0 complex., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q568A9", "ec_number_list": [], "go_molecular_function": "GO:0140777 protein-containing complex stabilizing activity", "go_cellular_component": "GO:0005739 mitochondrion;GO:0005743 mitochondrial inner membrane", "go_biological_process": "GO:0033615 mitochondrial proton-transporting ATP synthase complex assembly;GO:0065003 protein-containing complex assembly", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q1L987-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q08C53-1", "uniprot_id": [ { "id": "BBOF1_DANRE", "url": "https://www.uniprot.org/uniprot/Q08C53", "type": "external" } ], "mass": 59717.0, "length": 520, "protein_name": "Basal body-orientation factor 1", "gene_name": "bbof1a; bbof1", "organism": "Zebrafish", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "bbof1a; bbof1; bbof1; ccdc176; si:ch211-163l21.10", "gene_names_refseq": "", "protein_names_uniprotkb": "Basal body-orientation factor 1; Coiled-coil domain-containing protein 176", "protein_names_refseq": "", "tax_id": 7955, "disease": "", "pathway": " (dre:565282)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "27189481", "class_list": "", "function": "Basal body protein required in multiciliate cells to align and maintain cilia orientation in response to flow. May act by mediating a maturation step that stabilizes and aligns cilia orientation. Not required to respond to planar cell polarity (PCP) or flow-based orientation cues (By similarity)., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A8Y5S8", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0036064 ciliary basal body", "go_biological_process": "GO:0044458 motile cilium assembly", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q08C53-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "O42169-1", "uniprot_id": [ { "id": "O42169_DANRE", "url": "https://www.uniprot.org/uniprot/O42169", "type": "external" } ], "mass": 36843.0, "length": 325, "protein_name": "Odorant receptor 111-6", "gene_name": "or42c3", "organism": "Zebrafish", "refseq_name": "odorant receptor 111-6", "refseq_ac": [ { "id": "NP_571821", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_571821", "type": "external" } ], "gene_names_uniprotkb": "or42c3; olfr2.5; or111-6; or15.46; or2.5; zgc:195352; zgc:195353", "gene_names_refseq": "olfr2.5; or111-6; or15.46; or2.5; or42c3; zgc:195352; zgc:195353", "protein_names_uniprotkb": "Odorant receptor 111-6", "protein_names_refseq": "Dr3OR15.37; OR 2.5; fZOR7; odorant receptor 111-6; odorant receptor, family 2, member 5; odorant receptor, family D, subfamily 111, member 6; olfactory receptor protein 2.5", "tax_id": 7955, "disease": "", "pathway": " (dre:80364)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "15824306;16332259;19159490;20333175;24559675;26108469;26892307;32295537;33355666", "class_list": "", "function": "##Evidence-Data-START## Transcript is intronless :: BC162827.1 [ECO:0000345] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AF112374.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0004930 G protein-coupled receptor activity;GO:0004984 olfactory receptor activity;GO:0005549 odorant binding", "go_cellular_component": "GO:0005886 plasma membrane;GO:0016020 membrane", "go_biological_process": "GO:0050911 detection of chemical stimulus involved in sensory perception of smell", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "O42169-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "P0C8M4-1", "uniprot_id": [ { "id": "MTURN_DANRE", "url": "https://www.uniprot.org/uniprot/P0C8M4", "type": "external" } ], "mass": 15289.0, "length": 133, "protein_name": "Maturin", "gene_name": "mturn", "organism": "Zebrafish", "refseq_name": "maturin", "refseq_ac": [ { "id": "NP_001138278", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001138278", "type": "external" } ], "gene_names_uniprotkb": "mturn; ch211-149a19.1", "gene_names_refseq": "mturn; si:ch211-149a19.1", "protein_names_uniprotkb": "Maturin; Maturin neural progenitor differentiation regulator protein homolog", "protein_names_refseq": "UPF0452 protein C7orf41 homolog; maturin neural progenitor differentiation regulator protein homolog; maturin", "tax_id": 7955, "disease": "", "pathway": " (dre:792465)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "23594743;24095902", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: AL914042.1, AL914044.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA4476735 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000019.1. On Jan 25, 2009 this sequence version replaced XP_001331876.1., [RefSeq]; Maturin functions during primary neurogenesis and is required for the proneural pathway to regulate neural differentiation. GeneRIF: Maturin knockdown and overexpression studies showed that it is required for primary neurogenesis and regulates neural differentiation., [RefSeq, PubMed]; May be involved in early neuronal development (By similarity). May play a role in promoting megakaryocyte differentiation (By similarity)., [UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "B8JKY4", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005737 cytoplasm", "go_biological_process": "GO:0045654 positive regulation of megakaryocyte differentiation;GO:0023051 regulation of signaling", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "P0C8M4-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "P0C8Y2-1", "uniprot_id": [ { "id": "CR032_DANRE", "url": "https://www.uniprot.org/uniprot/P0C8Y2", "type": "external" } ], "mass": 8302.0, "length": 75, "protein_name": "UPF0729 protein C18orf32 homolog", "gene_name": "", "organism": "Zebrafish", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "", "gene_names_refseq": "", "protein_names_uniprotkb": "UPF0729 protein C18orf32 homolog", "protein_names_refseq": "", "tax_id": 7955, "disease": "", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005783 endoplasmic reticulum;GO:0005811 lipid droplet", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "P0C8Y2-1", "record_type": "protein", "filter_code": "0000000.0000000.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "P0C8Y3-1", "uniprot_id": [ { "id": "BBLN_DANRE", "url": "https://www.uniprot.org/uniprot/P0C8Y3", "type": "external" } ], "mass": 11179.0, "length": 99, "protein_name": "Bublin coiled-coil protein", "gene_name": "bbln", "organism": "Zebrafish", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "bbln", "gene_names_refseq": "", "protein_names_uniprotkb": "Bublin coiled-coil protein; UPF0184 protein C9orf16 homolog", "protein_names_refseq": "", "tax_id": 7955, "disease": "", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "Essential for intermediate filament organization in intestinal cells, interacts with intermediate filament and regulates intestinal lumen morphology., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0060090 molecular adaptor activity", "go_cellular_component": "GO:0005856 cytoskeleton;GO:0030054 cell junction;GO:0120219 subapical part of cell;GO:0070161 anchoring junction", "go_biological_process": "GO:0045110 intermediate filament bundle assembly", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "P0C8Y3-1", "record_type": "protein", "filter_code": "0000000.0000000.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "P47805-1", "uniprot_id": [ { "id": "M1I1A_DANRE", "url": "https://www.uniprot.org/uniprot/P47805", "type": "external" } ], "mass": 17487.0, "length": 152, "protein_name": "Mid1-interacting protein 1A", "gene_name": "mid1ip1a", "organism": "Zebrafish", "refseq_name": "mid1-interacting protein 1A", "refseq_ac": [ { "id": "NP_571410", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_571410", "type": "external" } ], "gene_names_uniprotkb": "mid1ip1a; g12", "gene_names_refseq": "g12; mid1ip1a; wu:fj32f05", "protein_names_uniprotkb": "Mid1-interacting protein 1A; Gastrulation-specific protein G12", "protein_names_refseq": "etID309730.9; gastrulation specific protein; gastrulation-specific protein G12; mid1-interacting protein 1A", "tax_id": 7955, "disease": "", "pathway": " (dre:30600); (R-DRE-200425)", "pathway_count": 2, "publication_count": 1, "publication_id_list": "8541223", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: U27121.1 [ECO:0000332] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from U27121.1., [RefSeq]; Involved in stabilization of microtubules. May play a role in the regulation of lipogenesis (By similarity)., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005634 nucleus;GO:0005829 cytosol;GO:0005874 microtubule", "go_biological_process": "GO:0046890 regulation of lipid biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "P47805-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "P62447-1", "uniprot_id": [ { "id": "ZFPL1_DANRE", "url": "https://www.uniprot.org/uniprot/P62447", "type": "external" } ], "mass": 35704.0, "length": 317, "protein_name": "Zinc finger protein-like 1", "gene_name": "zfpl1", "organism": "Zebrafish", "refseq_name": "zinc finger protein-like 1", "refseq_ac": [ { "id": "NP_956967", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_956967", "type": "external" } ], "gene_names_uniprotkb": "zfpl1; zgc:63760", "gene_names_refseq": "zfpl1; zgc:63760", "protein_names_uniprotkb": "Zinc finger protein-like 1", "protein_names_refseq": "zinc finger protein-like 1", "tax_id": 7955, "disease": "", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC058063.1, EE302385.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC058063.1., [RefSeq]; Required for cis-Golgi integrity and efficient ER to Golgi transport., [UniProtKB, UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0008270 zinc ion binding", "go_cellular_component": "GO:0005794 Golgi apparatus", "go_biological_process": "GO:0016192 vesicle-mediated transport", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "P62447-1", "record_type": "protein", "filter_code": "0000000.0000000.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "P79729-1", "uniprot_id": [ { "id": "DHH_DANRE", "url": "https://www.uniprot.org/uniprot/P79729", "type": "external" } ], "mass": 10069.0, "length": 88, "protein_name": "Desert hedgehog protein", "gene_name": "dhh", "organism": "Zebrafish", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "dhh", "gene_names_refseq": "", "protein_names_uniprotkb": "Desert hedgehog protein; DHH", "protein_names_refseq": "", "tax_id": 7955, "disease": "46,XY gonadal dysgenesis with minifascicular neuropathy (Disease Ontology:DOID:0051055); 46,XY sex reversal 7 (Disease Ontology:DOID:0111774); 46,XY complete gonadal dysgenesis (Disease Ontology:DOID:14448)", "pathway": "", "pathway_count": 0, "publication_count": 2, "publication_id_list": "8917540;9831563", "class_list": "", "function": "Morphogen that activates the smoothened signaling pathway, and which is essential for a variety of patterning events during development. Acts by binding to the patched receptor (PTCH1 or PTCH2), relieving smoothened (SMO) inhibition by patched, activating the smoothened signaling pathway and transcription of target genes. In the absence of DHH, patched represses the constitutive signaling activity of SMO., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 3, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q9YGU3", "ec_number_list": [], "go_molecular_function": "GO:0046872 metal ion binding;GO:0008233 peptidase activity", "go_cellular_component": "GO:0005576 extracellular region;GO:0005886 plasma membrane", "go_biological_process": "GO:0006508 proteolysis;GO:0007267 cell-cell signaling", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "P79729-1", "record_type": "protein", "filter_code": "0000000.0000110.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q05AK9-1", "uniprot_id": [ { "id": "TMA7_DANRE", "url": "https://www.uniprot.org/uniprot/Q05AK9", "type": "external" } ], "mass": 6960.0, "length": 64, "protein_name": "Translation machinery-associated protein 7", "gene_name": "tma7", "organism": "Zebrafish", "refseq_name": "translation machinery-associated protein 7", "refseq_ac": [ { "id": "NP_001153306", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001153306", "type": "external" } ], "gene_names_uniprotkb": "tma7; ccdc72; zgc:153700", "gene_names_refseq": "ccdc72; im:7151632; tma7; zgc:153700", "protein_names_uniprotkb": "Translation machinery-associated protein 7; Coiled-coil domain-containing protein 72", "protein_names_refseq": "coiled-coil domain-containing protein 72; translation machinery-associated protein 7; translational machinery associated 7 homolog", "tax_id": 7955, "disease": "", "pathway": " (dre:768290)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC124431.1, EH454481.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000022.1, EH538281.1 and BC124431.1. On May 8, 2009 this sequence version replaced XP_001923154.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q05AK9-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q05AL1-1", "uniprot_id": [ { "id": "ARMC8_DANRE", "url": "https://www.uniprot.org/uniprot/Q05AL1", "type": "external" } ], "mass": 75451.0, "length": 673, "protein_name": "Armadillo repeat-containing protein 8", "gene_name": "armc8", "organism": "Zebrafish", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "armc8; zgc:153683", "gene_names_refseq": "", "protein_names_uniprotkb": "Armadillo repeat-containing protein 8", "protein_names_refseq": "", "tax_id": 7955, "disease": "", "pathway": " (dre:571528); (R-DRE-6798695); (R-DRE-9861718)", "pathway_count": 3, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "Component of the CTLH E3 ubiquitin-protein ligase complex that mediates ubiquitination and subsequent proteasomal degradation of target proteins., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0000151 ubiquitin ligase complex;GO:0034657 GID complex", "go_biological_process": "GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process;GO:0048513 animal organ development", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q05AL1-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q05AM4-1", "uniprot_id": [ { "id": "FAH2B_DANRE", "url": "https://www.uniprot.org/uniprot/Q05AM4", "type": "external" } ], "mass": 57026.0, "length": 526, "protein_name": "Fatty-acid amide hydrolase 2-B", "gene_name": "faah2b", "organism": "Zebrafish", "refseq_name": "fatty-acid amide hydrolase 2-B", "refseq_ac": [ { "id": "NP_001070930", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001070930", "type": "external" } ], "gene_names_uniprotkb": "faah2b; zgc:153568", "gene_names_refseq": "faah2b; zgc:153568", "protein_names_uniprotkb": "Fatty-acid amide hydrolase 2-B; 3.5.1.99", "protein_names_refseq": "fatty-acid amide hydrolase 2-B", "tax_id": 7955, "disease": "Parkinson's disease 1 (Disease Ontology:DOID:0060367)", "pathway": " (dre:768298)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "17256142", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC124392.1, BC165762.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505375, SAMEA3505378 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC124392.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [ { "id": "3.5.1.99", "url": "https://www.rhea-db.org/rhea/?query=ec:3.5.1.99", "type": "external" } ], "go_molecular_function": "GO:0017064 fatty acid amide hydrolase activity", "go_cellular_component": "GO:0016020 membrane", "go_biological_process": "GO:0016042 lipid catabolic process", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q05AM4-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q08BB5-1", "uniprot_id": [ { "id": "CTL2A_DANRE", "url": "https://www.uniprot.org/uniprot/Q08BB5", "type": "external" } ], "mass": 52989.0, "length": 469, "protein_name": "CTD small phosphatase-like protein 2-A", "gene_name": "ctdspl2a", "organism": "Zebrafish", "refseq_name": "CTD small phosphatase-like protein 2-A", "refseq_ac": [ { "id": "NP_001071012", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001071012", "type": "external" } ], "gene_names_uniprotkb": "ctdspl2a; zgc:154017", "gene_names_refseq": "ctdspl2a; zgc:154017", "protein_names_uniprotkb": "CTD small phosphatase-like protein 2-A; 3.1.3.-; CTDSP-like 2-A", "protein_names_refseq": "CTD small phosphatase-like protein 2-A; CTDSP-like 2-A", "tax_id": 7955, "disease": "", "pathway": " (dre:558181)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC124794.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC124794.1. On or before Nov 9, 2006 this sequence version replaced XP_683739.1, XP_707185.1, XP_707186.1, XP_707187.1., [RefSeq]; Probable phosphatase., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0004721 phosphoprotein phosphatase activity", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q08BB5-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q08BG1-1", "uniprot_id": [ { "id": "TMPPE_DANRE", "url": "https://www.uniprot.org/uniprot/Q08BG1", "type": "external" } ], "mass": 48410.0, "length": 437, "protein_name": "Transmembrane protein with metallophosphoesterase domain", "gene_name": "tmppe", "organism": "Zebrafish", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "tmppe; zgc:153790", "gene_names_refseq": "", "protein_names_uniprotkb": "Transmembrane protein with metallophosphoesterase domain; 3.1.-.-", "protein_names_refseq": "", "tax_id": 7955, "disease": "", "pathway": " (dre:569483)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "", "predicted_glycosites": 2, "predicted_n_glycosites": 0, "predicted_o_glycosites": 2, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 2, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0016787 hydrolase activity;GO:0046872 metal ion binding", "go_cellular_component": "GO:0016020 membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q08BG1-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q08BJ2-1", "uniprot_id": [ { "id": "KHDR2_DANRE", "url": "https://www.uniprot.org/uniprot/Q08BJ2", "type": "external" } ], "mass": 38829.0, "length": 346, "protein_name": "KH domain-containing, RNA-binding, signal transduction-associated protein 2", "gene_name": "khdrbs2", "organism": "Zebrafish", "refseq_name": "KH domain-containing, RNA-binding, signal transduction-associated protein 2", "refseq_ac": [ { "id": "NP_001070758", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001070758", "type": "external" } ], "gene_names_uniprotkb": "khdrbs2; zgc:153588", "gene_names_refseq": "khdrbs2; zgc:153588", "protein_names_uniprotkb": "KH domain-containing, RNA-binding, signal transduction-associated protein 2", "protein_names_refseq": "KH domain-containing, RNA-binding, signal transduction-associated protein 2", "tax_id": 7955, "disease": "", "pathway": " (dre:768147); (R-DRE-8849468)", "pathway_count": 2, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC124701.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC124701.1., [RefSeq]; RNA-binding protein that plays a role in the regulation of alternative splicing., [UniProtKB, UniProtKB]", "predicted_glycosites": 2, "predicted_n_glycosites": 0, "predicted_o_glycosites": 2, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 2, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0003729 mRNA binding;GO:0008143 poly(A) binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006397 mRNA processing;GO:0000381 regulation of alternative mRNA splicing, via spliceosome", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q08BJ2-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q08BW6-1", "uniprot_id": [ { "id": "CDIN1_DANRE", "url": "https://www.uniprot.org/uniprot/Q08BW6", "type": "external" } ], "mass": 34573.0, "length": 300, "protein_name": "CDAN1-interacting nuclease 1", "gene_name": "cdin1", "organism": "Zebrafish", "refseq_name": "CDAN1-interacting nuclease 1", "refseq_ac": [ { "id": "NP_001070190", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001070190", "type": "external" } ], "gene_names_uniprotkb": "cdin1; fb38f07; fb44c11; wu:fb38f07; wu:fb44c11; zgc:154061", "gene_names_refseq": "cdin1; fb38f07; fb44c11; wu:fb38f07; wu:fb44c11; zgc:154061", "protein_names_uniprotkb": "CDAN1-interacting nuclease 1", "protein_names_refseq": "CDAN1-interacting nuclease 1; uncharacterized protein C15orf41 homolog", "tax_id": 7955, "disease": "congenital dyserythropoietic anemia type Ib (Disease Ontology:DOID:0111397)", "pathway": " (dre:767755)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GFIL01045447.1, SRR26395050.96166.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000017.1. On or before Jul 3, 2025 this sequence version replaced XP_073783632.1, NP_001070190.1., [RefSeq]; May play a role in erythroid cell differentiation., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm", "go_biological_process": "GO:0030218 erythrocyte differentiation", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q08BW6-1", "record_type": "protein", "filter_code": "0000000.0000011.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q08BY1-1", "uniprot_id": [ { "id": "MED17_DANRE", "url": "https://www.uniprot.org/uniprot/Q08BY1", "type": "external" } ], "mass": 72324.0, "length": 643, "protein_name": "Mediator of RNA polymerase II transcription subunit 17", "gene_name": "med17", "organism": "Zebrafish", "refseq_name": "mediator of RNA polymerase II transcription subunit 17", "refseq_ac": [ { "id": "NP_001071042", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001071042", "type": "external" } ], "gene_names_uniprotkb": "med17; MED17; crsp6; zgc:153983; zgc:73307", "gene_names_refseq": "crsp6; med17; zgc:153983; zgc:73307", "protein_names_uniprotkb": "Mediator of RNA polymerase II transcription subunit 17; CRSP complex subunit 6; Cofactor required for Sp1 transcriptional activation subunit 6; Mediator complex subunit 17", "protein_names_refseq": "CRSP complex subunit 6; cofactor required for Sp1 transcriptional activation, subunit 6; mediator of RNA polymerase II transcription subunit 17", "tax_id": 7955, "disease": "infantile cerebral and cerebellar atrophy with postnatal progressive microcephaly (Disease Ontology:DOID:0111262)", "pathway": " (dre:567560)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "17088561", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC124507.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## ##RefSeq-Attributes-START## CDS uses downstream in-frame AUG :: upstream AUG and CDS extension is not conserved ##RefSeq-Attributes-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC124507.1. On Nov 9, 2006 this sequence version replaced XP_695952.1., [RefSeq]; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors (By similarity)., [UniProtKB, UniProtKB, UniProtKB, UniProtKB]; This paper demonstrates a regulatory role of motionless/Med12 in vertebrate neuronal development., [RefSeq, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0003712 transcription coregulator activity", "go_cellular_component": "GO:0016592 mediator complex;GO:0070847 core mediator complex", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006357 regulation of transcription by RNA polymerase II;GO:0021680 cerebellar Purkinje cell layer development", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q08BY1-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q08C69-1", "uniprot_id": [ { "id": "RUSD1_DANRE", "url": "https://www.uniprot.org/uniprot/Q08C69", "type": "external" } ], "mass": 33340.0, "length": 293, "protein_name": "Pseudouridylate synthase RPUSD1", "gene_name": "rpusd1", "organism": "Zebrafish", "refseq_name": "RNA pseudouridylate synthase domain-containing protein 1", "refseq_ac": [ { "id": "NP_001070221", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001070221", "type": "external" } ], "gene_names_uniprotkb": "rpusd1; fe26f08; wu:fe26f08; zgc:153465", "gene_names_refseq": "fe26f08; rpusd1; wu:fe26f08; zgc:153465", "protein_names_uniprotkb": "Pseudouridylate synthase RPUSD1; 5.4.99.-; RNA pseudouridylate synthase domain-containing protein 1; Ribosomal large subunit pseudouridine synthase C-like protein", "protein_names_refseq": "RNA pseudouridylate synthase domain containing 1; RNA pseudouridylate synthase domain-containing protein 1", "tax_id": 7955, "disease": "", "pathway": " (dre:767786)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC124362.1, AW128657.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505378, SAMEA3505380 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC124362.1., [RefSeq]; Pseudouridylate synthase that catalyzes the conversion of uridine to pseudouridine in cytoplasmic tRNAs. Catalyzes pseudouridylation of pseudouridine-30 and pseudouridine-72 from uracil-30 and uracil-72 within the anticodon stem of cytoplasmic tRNAs., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [ { "id": "5.4.99.12", "url": "https://www.rhea-db.org/rhea/?query=ec:5.4.99.12", "type": "external" }, { "id": "5.4.99.-", "url": "https://www.rhea-db.org/rhea/?query=ec:5.4.99.-", "type": "external" } ], "go_molecular_function": "GO:0003723 RNA binding;GO:0009982 pseudouridine synthase activity", "go_cellular_component": "", "go_biological_process": "GO:0000455 enzyme-directed rRNA pseudouridine synthesis;GO:0001522 pseudouridine synthesis", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q08C69-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q08C81-1", "uniprot_id": [ { "id": "MD19A_DANRE", "url": "https://www.uniprot.org/uniprot/Q08C81", "type": "external" } ], "mass": 26818.0, "length": 242, "protein_name": "Mediator of RNA polymerase II transcription subunit 19-A", "gene_name": "med19a", "organism": "Zebrafish", "refseq_name": "mediator of RNA polymerase II transcription subunit 19-A", "refseq_ac": [ { "id": "NP_001070059", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001070059", "type": "external" } ], "gene_names_uniprotkb": "med19a; zgc:153400", "gene_names_refseq": "med19a; zgc:153400", "protein_names_uniprotkb": "Mediator of RNA polymerase II transcription subunit 19-A; Mediator complex subunit 19-A", "protein_names_refseq": "mediator complex subunit 19-A; mediator of RNA polymerase II transcription subunit 19-A", "tax_id": 7955, "disease": "", "pathway": " (dre:767651)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC124344.1, EH452011.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505372 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC124344.1., [RefSeq]; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors (By similarity)., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0003712 transcription coregulator activity", "go_cellular_component": "GO:0016592 mediator complex", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0045944 positive regulation of transcription by RNA polymerase II", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q08C81-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q08CA1-1", "uniprot_id": [ { "id": "GDPP1_DANRE", "url": "https://www.uniprot.org/uniprot/Q08CA1", "type": "external" } ], "mass": 38992.0, "length": 343, "protein_name": "GDP-D-glucose phosphorylase 1", "gene_name": "gdpgp1", "organism": "Zebrafish", "refseq_name": "GDP-D-glucose phosphorylase 1", "refseq_ac": [ { "id": "NP_001071021", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001071021", "type": "external" } ], "gene_names_uniprotkb": "gdpgp1; zgc:153343", "gene_names_refseq": "gdpgp1; wu:fc52g01; zgc:153343", "protein_names_uniprotkb": "GDP-D-glucose phosphorylase 1; 2.7.7.78", "protein_names_refseq": "GDP-D-glucose phosphorylase 1; GDP-D-glucose phosphorylase C15orf58 homolog", "tax_id": 7955, "disease": "", "pathway": " (dre:560896)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC124322.1 [ECO:0000332] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC124322.1. On Nov 9, 2006 this sequence version replaced XP_689388.1., [RefSeq]; Specific and highly efficient GDP-D-glucose phosphorylase that regulates the levels of GDP-D-glucose in cells and is involved in adaptive response to stress conditions. Plays a key role in neuronal stress resistance by modulating neuronal glycogen levels and maintaining glucose balance., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [ { "id": "2.7.7.78", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.7.78", "type": "external" } ], "go_molecular_function": "GO:0016787 hydrolase activity;GO:0000166 nucleotide binding;GO:0005085 guanyl-nucleotide exchange factor activity;GO:0080048 GDP-D-glucose phosphorylase activity", "go_cellular_component": "GO:0005737 cytoplasm", "go_biological_process": "GO:0006006 glucose metabolic process", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q08CA1-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q08CE6-1", "uniprot_id": [ { "id": "T178A_DANRE", "url": "https://www.uniprot.org/uniprot/Q08CE6", "type": "external" } ], "mass": 33992.0, "length": 301, "protein_name": "Transmembrane protein 178A", "gene_name": "tmem178a", "organism": "Zebrafish", "refseq_name": "transmembrane protein 178A precursor", "refseq_ac": [ { "id": "NP_001070108", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001070108", "type": "external" } ], "gene_names_uniprotkb": "tmem178a; tmem178; zgc:153181", "gene_names_refseq": "tmem178a; tmem178; zgc:153181", "protein_names_uniprotkb": "Transmembrane protein 178A", "protein_names_refseq": "transmembrane protein 178A precursor; transmembrane protein 178", "tax_id": 7955, "disease": "", "pathway": " (dre:767702)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC124270.1, EH444587.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC124270.1., [RefSeq]; May act as a negative regulator of osteoclast differentiation., [UniProtKB, UniProtKB]", "predicted_glycosites": 1, "predicted_n_glycosites": 1, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005789 endoplasmic reticulum membrane", "go_biological_process": "GO:0051480 regulation of cytosolic calcium ion concentration;GO:0045671 negative regulation of osteoclast differentiation", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q08CE6-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000010000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q08CG8-1", "uniprot_id": [ { "id": "RNF44_DANRE", "url": "https://www.uniprot.org/uniprot/Q08CG8", "type": "external" } ], "mass": 50647.0, "length": 448, "protein_name": "RING finger protein 44", "gene_name": "rnf44", "organism": "Zebrafish", "refseq_name": "RING finger protein 44", "refseq_ac": [ { "id": "NP_001070092", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001070092", "type": "external" } ], "gene_names_uniprotkb": "rnf44; zgc:153103", "gene_names_refseq": "rnf44; zgc:153103", "protein_names_uniprotkb": "RING finger protein 44", "protein_names_refseq": "RING finger protein 44", "tax_id": 7955, "disease": "", "pathway": " (dre:767686)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC124246.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505392, SAMEA4476728 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC124246.1., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0008270 zinc ion binding;GO:0061630 ubiquitin protein ligase activity", "go_cellular_component": "", "go_biological_process": "GO:0016567 protein ubiquitination", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q08CG8-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q08CG9-1", "uniprot_id": [ { "id": "T229B_DANRE", "url": "https://www.uniprot.org/uniprot/Q08CG9", "type": "external" } ], "mass": 21801.0, "length": 189, "protein_name": "Transmembrane protein 229b", "gene_name": "tmem229b", "organism": "Zebrafish", "refseq_name": "transmembrane protein 229b", "refseq_ac": [ { "id": "NP_001070141", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001070141", "type": "external" } ], "gene_names_uniprotkb": "tmem229b; zgc:153098", "gene_names_refseq": "tmem229b; zgc:153098", "protein_names_uniprotkb": "Transmembrane protein 229b", "protein_names_refseq": "transmembrane protein 229b", "tax_id": 7955, "disease": "", "pathway": " (dre:767735)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GDQQ01007480.1, GFIL01041102.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## ##RefSeq-Attributes-START## CDS uses downstream in-frame AUG :: upstream AUG and CDS extension is not conserved ##RefSeq-Attributes-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000017.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0016020 membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q08CG9-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q08CH7-1", "uniprot_id": [ { "id": "RS10B_DANRE", "url": "https://www.uniprot.org/uniprot/Q08CH7", "type": "external" } ], "mass": 83127.0, "length": 731, "protein_name": "Radial spoke head 10 homolog B", "gene_name": "rsph10b", "organism": "Zebrafish", "refseq_name": "radial spoke head 10 homolog B", "refseq_ac": [ { "id": "NP_001070227", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001070227", "type": "external" } ], "gene_names_uniprotkb": "rsph10b; zgc:153062", "gene_names_refseq": "rsph10b; zgc:153062", "protein_names_uniprotkb": "Radial spoke head 10 homolog B", "protein_names_refseq": "radial spoke head 10 homolog B", "tax_id": 7955, "disease": "", "pathway": " (dre:767792)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC124234.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN01765705, SAMN08196787 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC124234.1., [RefSeq]; May function as part of axonemal radial spoke complexes. Radial spoke complexes are important for ciliary motility., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005929 cilium;GO:0036126 sperm flagellum;GO:0005930 axoneme;GO:0097729 9+2 motile cilium", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q08CH7-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q08CH8-1", "uniprot_id": [ { "id": "ZTRF1_DANRE", "url": "https://www.uniprot.org/uniprot/Q08CH8", "type": "external" } ], "mass": 42617.0, "length": 382, "protein_name": "Zinc finger TRAF-type-containing protein 1", "gene_name": "zftraf1", "organism": "Zebrafish", "refseq_name": "zinc finger TRAF-type-containing protein 1", "refseq_ac": [ { "id": "NP_001070208", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001070208", "type": "external" } ], "gene_names_uniprotkb": "zftraf1; cyhr1; zgc:153061", "gene_names_refseq": "cyhr1; fi59b02; wu:fi59b02; zftraf1; zgc:153061", "protein_names_uniprotkb": "Zinc finger TRAF-type-containing protein 1; Cysteine and histidine-rich protein 1", "protein_names_refseq": "cysteine and histidine-rich protein 1-like; cysteine and histidine-rich protein 1; cysteine/histidine-rich 1; zinc finger TRAF-type containing 1; zinc finger TRAF-type-containing protein 1", "tax_id": 7955, "disease": "", "pathway": " (dre:767773)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "23594743", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC124233.1, SRR32588731.1405779.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505383 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000019.1. On Jun 26, 2024 this sequence version replaced NP_001070208.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "F1R433", "ec_number_list": [], "go_molecular_function": "GO:0008270 zinc ion binding", "go_cellular_component": "GO:0048471 perinuclear region of cytoplasm", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q08CH8-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q08CI4-1", "uniprot_id": [ { "id": "CCYL1_DANRE", "url": "https://www.uniprot.org/uniprot/Q08CI4", "type": "external" } ], "mass": 38784.0, "length": 339, "protein_name": "Cyclin-Y-like protein 1", "gene_name": "ccnyl1", "organism": "Zebrafish", "refseq_name": "cyclin-Y-like protein 1", "refseq_ac": [ { "id": "NP_001070188", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001070188", "type": "external" } ], "gene_names_uniprotkb": "ccnyl1; zgc:153047", "gene_names_refseq": "CH1073-226M24.2; ccnyl1; fi41h04; wu:fi41h04; zgc:153047", "protein_names_uniprotkb": "Cyclin-Y-like protein 1", "protein_names_refseq": "cyclin-Y-like protein 1", "tax_id": 7955, "disease": "", "pathway": " (dre:767752)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC124226.1, EG585630.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC124226.1., [RefSeq]; Key regulator of Wnt signaling implicated in various biological processes such as embryonic neurogenesis., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0019901 protein kinase binding;GO:0061575 cyclin-dependent protein serine/threonine kinase activator activity", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "GO:0007399 nervous system development;GO:0060828 regulation of canonical Wnt signaling pathway", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q08CI4-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q08CN0-1", "uniprot_id": [ { "id": "TPPC2_DANRE", "url": "https://www.uniprot.org/uniprot/Q08CN0", "type": "external" } ], "mass": 16454.0, "length": 140, "protein_name": "Trafficking protein particle complex subunit 2", "gene_name": "trappc2", "organism": "Zebrafish", "refseq_name": "trafficking protein particle complex subunit 2", "refseq_ac": [ { "id": "NP_001307044", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001307044", "type": "external" } ], "gene_names_uniprotkb": "trappc2; zgc:152903", "gene_names_refseq": "trappc2; zgc:152903", "protein_names_uniprotkb": "Trafficking protein particle complex subunit 2", "protein_names_refseq": "trafficking protein particle complex 2; trafficking protein particle complex subunit 2", "tax_id": 7955, "disease": "X-linked spondyloepiphyseal dysplasia tarda (Disease Ontology:DOID:0080362); spondyloepiphyseal dysplasia congenita (Disease Ontology:DOID:14789)", "pathway": " (dre:767808); (R-DRE-204005); (R-DRE-8876198)", "pathway_count": 3, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: CT699145.2, ERR6511330.1915777.1 [ECO:0000332] RNAseq introns :: partial sample support SAMEA4476740 [ECO:0000350] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000009.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments., [RefSeq]; May play a role in vesicular transport from endoplasmic reticulum to Golgi., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 2, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0048471 perinuclear region of cytoplasm;GO:0005793 endoplasmic reticulum-Golgi intermediate compartment;GO:0030008 TRAPP complex", "go_biological_process": "GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q08CN0-1", "record_type": "protein", "filter_code": "0000000.0000011.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q0D285-1", "uniprot_id": [ { "id": "TM141_DANRE", "url": "https://www.uniprot.org/uniprot/Q0D285", "type": "external" } ], "mass": 13904.0, "length": 124, "protein_name": "Transmembrane protein 141", "gene_name": "tmem141", "organism": "Zebrafish", "refseq_name": "transmembrane protein 141", "refseq_ac": [ { "id": "NP_001070066", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001070066", "type": "external" } ], "gene_names_uniprotkb": "tmem141; zgc:153677", "gene_names_refseq": "si:ch211-268m12.4; tmem141; zgc:153677", "protein_names_uniprotkb": "Transmembrane protein 141", "protein_names_refseq": "transmembrane protein 141", "tax_id": 7955, "disease": "", "pathway": " (dre:767658)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "23594743", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC122376.1, DT870838.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA4476745, SAMEA4476751 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC122376.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0016020 membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q0D285-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q0D289-1", "uniprot_id": [ { "id": "MOSMO_DANRE", "url": "https://www.uniprot.org/uniprot/Q0D289", "type": "external" } ], "mass": 18192.0, "length": 167, "protein_name": "Modulator of smoothened protein", "gene_name": "mosmob", "organism": "Zebrafish", "refseq_name": "modulator of smoothened protein precursor", "refseq_ac": [ { "id": "NP_001070129", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001070129", "type": "external" } ], "gene_names_uniprotkb": "mosmob; zgc:153595", "gene_names_refseq": "mosmob; zgc:153595", "protein_names_uniprotkb": "Modulator of smoothened protein; Attenuator of hedgehog", "protein_names_refseq": "attenuator of hedgehog; modulator of smoothened protein precursor; modulator of smoothened protein; uncharacterized protein C16orf52 homolog", "tax_id": 7955, "disease": "chromosome 16p12.1 deletion syndrome (Disease Ontology:DOID:0060399)", "pathway": " (dre:767723)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC122343.1, EH582801.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505389, SAMEA4476741 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC122343.1., [RefSeq]; Acts as a negative regulator of hedgehog signaling probably by promoting internalization and subsequent degradation of smoothened protein (SMO) present in the ciliary membrane. Plays a role in sonic hedgehog (SHH)-induced spinal neural progenitor cells differentiation., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005794 Golgi apparatus;GO:0005886 plasma membrane;GO:0060170 ciliary membrane", "go_biological_process": "GO:1904888 cranial skeletal system development;GO:0030154 cell differentiation;GO:0045664 regulation of neuron differentiation;GO:0031647 regulation of protein stability;GO:0045879 negative regulation of smoothened signaling pathway", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q0D289-1", "record_type": "protein", "filter_code": "0000000.0000011.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q0P3W2-1", "uniprot_id": [ { "id": "OLF3B_DANRE", "url": "https://www.uniprot.org/uniprot/Q0P3W2", "type": "external" } ], "mass": 44922.0, "length": 394, "protein_name": "Olfactomedin-like protein 3B", "gene_name": "olfml3b", "organism": "Zebrafish", "refseq_name": "olfactomedin-like protein 3B precursor", "refseq_ac": [ { "id": "NP_001039322", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001039322", "type": "external" } ], "gene_names_uniprotkb": "olfml3b; olfml3a; olfml3; wu:faa48g10; wu:fb02c05; wu:fl19d05; zgc:153761; zgc:153815", "gene_names_refseq": "olfml3a; olfml3b; zgc:153761", "protein_names_uniprotkb": "Olfactomedin-like protein 3B", "protein_names_refseq": "olfactomedin-like protein 3B precursor; olfactomedin-like protein 3B", "tax_id": 7955, "disease": "", "pathway": " (dre:568106)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC122413.1, DV600676.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505376 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC122413.1. On Sep 6, 2006 this sequence version replaced XP_696510.1., [RefSeq]; Secreted scaffold protein that plays an essential role in dorsoventral patterning during early development. Stabilizes axial formation by restricting chordin (CHRD) activity on the dorsal side. Acts by facilitating the association between the tolloid proteases and their substrate chordin (CHRD), leading to enhance chordin (CHRD) degradation (By similarity)., [UniProtKB]", "predicted_glycosites": 3, "predicted_n_glycosites": 3, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 3, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005615 extracellular space", "go_biological_process": "GO:0007165 signal transduction", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q0P3W2-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000010000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q0P442-1", "uniprot_id": [ { "id": "RNKB_DANRE", "url": "https://www.uniprot.org/uniprot/Q0P442", "type": "external" } ], "mass": 11046.0, "length": 101, "protein_name": "Ribonuclease kappa-B", "gene_name": "rnasekb", "organism": "Zebrafish", "refseq_name": "ribonuclease kappa-B", "refseq_ac": [ { "id": "NP_001038840", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001038840", "type": "external" } ], "gene_names_uniprotkb": "rnasekb; zgc:153424", "gene_names_refseq": "fj61g06; rnasekb; wu:fj61g06; zgc:153424", "protein_names_uniprotkb": "Ribonuclease kappa-B; 3.1.-.-; RNase K-B; RNase kappa-B", "protein_names_refseq": "RNase K-B; RNase kappa-B; ribonuclease kappa-B", "tax_id": 7955, "disease": "", "pathway": " (dre:336290)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC122286.1, EH452424.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505374, SAMEA3505386 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC122286.1. On Jan 22, 2009 this sequence version replaced XP_001918598.1., [RefSeq]; Endoribonuclease which preferentially cleaves ApU and ApG phosphodiester bonds., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0016787 hydrolase activity;GO:0004521 RNA endonuclease activity", "go_cellular_component": "GO:0016020 membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q0P442-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q0P451-1", "uniprot_id": [ { "id": "COA5_DANRE", "url": "https://www.uniprot.org/uniprot/Q0P451", "type": "external" } ], "mass": 8734.0, "length": 75, "protein_name": "Cytochrome c oxidase assembly factor 5", "gene_name": "coa5", "organism": "Zebrafish", "refseq_name": "cytochrome c oxidase assembly factor 5", "refseq_ac": [ { "id": "NP_001154969", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001154969", "type": "external" } ], "gene_names_uniprotkb": "coa5; zgc:153408", "gene_names_refseq": "coa5; zgc:153408", "protein_names_uniprotkb": "Cytochrome c oxidase assembly factor 5", "protein_names_refseq": "cytochrome c oxidase assembly factor 5", "tax_id": 7955, "disease": "mitochondrial complex IV deficiency nuclear type 9 (Disease Ontology:DOID:0080359)", "pathway": " (dre:751633); (R-DRE-9864848)", "pathway_count": 2, "publication_count": 1, "publication_id_list": "23594743", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: EH486485.1, EH570537.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505386, SAMEA4476728 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000009.1, EH495110.1 and EH486485.1., [RefSeq]; Assembly factor for cytochrome c oxidase (respiratory chain complex IV). Stabilizes an early formation of cytochrome c oxidase assembly factors, until it is displaced by the metallochaperone copper-delivery protein COX17., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NRN9;B0S740", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005739 mitochondrion;GO:0005758 mitochondrial intermembrane space", "go_biological_process": "GO:0033617 mitochondrial respiratory chain complex IV assembly", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q0P451-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q0P457-1", "uniprot_id": [ { "id": "KTI12_DANRE", "url": "https://www.uniprot.org/uniprot/Q0P457", "type": "external" } ], "mass": 31606.0, "length": 275, "protein_name": "Protein KTI12 homolog", "gene_name": "kti12", "organism": "Zebrafish", "refseq_name": "protein KTI12 homolog", "refseq_ac": [ { "id": "NP_001119890", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001119890", "type": "external" } ], "gene_names_uniprotkb": "kti12; si:dkey-77f17.5; zgc:153393", "gene_names_refseq": "kti12; si:dkey-77f17.5; zgc:153393", "protein_names_uniprotkb": "Protein KTI12 homolog", "protein_names_refseq": "protein KTI12 homolog", "tax_id": 7955, "disease": "", "pathway": " (dre:751662)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "23594743", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC122265.1, GFIL01014194.1 [ECO:0000332] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000018.1. On May 24, 2009 this sequence version replaced NP_001038844.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q1MT61", "ec_number_list": [], "go_molecular_function": "GO:0005524 ATP binding", "go_cellular_component": "", "go_biological_process": "GO:0006357 regulation of transcription by RNA polymerase II;GO:0002098 tRNA wobble uridine modification", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q0P457-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q0P467-1", "uniprot_id": [ { "id": "RNKA_DANRE", "url": "https://www.uniprot.org/uniprot/Q0P467", "type": "external" } ], "mass": 11266.0, "length": 101, "protein_name": "Ribonuclease kappa-A", "gene_name": "rnaseka", "organism": "Zebrafish", "refseq_name": "ribonuclease kappa-A", "refseq_ac": [ { "id": "NP_001038870", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001038870", "type": "external" } ], "gene_names_uniprotkb": "rnaseka; zgc:153350", "gene_names_refseq": "fc16d12; rnaseka; wu:fc16d12; zgc:153350", "protein_names_uniprotkb": "Ribonuclease kappa-A; 3.1.-.-; RNase K-A; RNase kappa-A", "protein_names_refseq": "RNase K-A; RNase kappa-A; ribonuclease kappa-A; ribonuclease kappa", "tax_id": 7955, "disease": "", "pathway": " (dre:751692)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: EH542979.1, BC122250.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA4476781 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from EH543051.1, BC122250.1, EH468271.1 and EH598468.1., [RefSeq]; Endoribonuclease which preferentially cleaves ApU and ApG phosphodiester bonds., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0016787 hydrolase activity;GO:0004521 RNA endonuclease activity", "go_cellular_component": "GO:0016020 membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q0P467-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q0P4A4-1", "uniprot_id": [ { "id": "NAT14_DANRE", "url": "https://www.uniprot.org/uniprot/Q0P4A4", "type": "external" } ], "mass": 31818.0, "length": 280, "protein_name": "Probable N-acetyltransferase 14", "gene_name": "nat14", "organism": "Zebrafish", "refseq_name": "probable N-acetyltransferase 14", "refseq_ac": [ { "id": "NP_001038809", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001038809", "type": "external" } ], "gene_names_uniprotkb": "nat14; zgc:153234", "gene_names_refseq": "nat14; zgc:153234", "protein_names_uniprotkb": "Probable N-acetyltransferase 14; 2.3.1.-", "protein_names_refseq": "probable N-acetyltransferase 14", "tax_id": 7955, "disease": "", "pathway": " (dre:751624)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: SRR32588723.122400.1, SRR32588724.1712810.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505373, SAMEA3505376 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000016.1. On or before Jul 2, 2025 this sequence version replaced XP_073781394.1, NP_001038809.1., [RefSeq]; Probable acetyltransferase., [UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0008080 N-acetyltransferase activity", "go_cellular_component": "GO:0016020 membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q0P4A4-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q0P4B9-1", "uniprot_id": [ { "id": "MCRI1_DANRE", "url": "https://www.uniprot.org/uniprot/Q0P4B9", "type": "external" } ], "mass": 11291.0, "length": 97, "protein_name": "Mapk-regulated corepressor-interacting protein 1", "gene_name": "mcrip1", "organism": "Zebrafish", "refseq_name": "mapk-regulated corepressor-interacting protein 1", "refseq_ac": [ { "id": "NP_001038936", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001038936", "type": "external" } ], "gene_names_uniprotkb": "mcrip1; fam195b; zgc:153165", "gene_names_refseq": "fam195b; mcrip1; zgc:153165", "protein_names_uniprotkb": "Mapk-regulated corepressor-interacting protein 1; Protein FAM195B", "protein_names_refseq": "family with sequence similarity 195, member B; mapk-regulated corepressor-interacting protein 1; protein FAM195B", "tax_id": 7955, "disease": "", "pathway": " (dre:751762)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "18307296", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC122169.1, EH507957.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from EB787987.1, EH595050.1, EH597375.1, CT668811.2 and BC122169.1., [RefSeq]; May play a role in the regulation of the epithelial-mesenchymal transition., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0010494 cytoplasmic stress granule", "go_biological_process": "GO:0010717 regulation of epithelial to mesenchymal transition", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q0P4B9-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q0P4F6-1", "uniprot_id": [ { "id": "FLTOP_DANRE", "url": "https://www.uniprot.org/uniprot/Q0P4F6", "type": "external" } ], "mass": 24027.0, "length": 213, "protein_name": "Protein Flattop", "gene_name": "cfap126", "organism": "Zebrafish", "refseq_name": "protein Flattop", "refseq_ac": [ { "id": "NP_001038883", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001038883", "type": "external" } ], "gene_names_uniprotkb": "cfap126; fltp; zgc:152916", "gene_names_refseq": "cfap126; fltp; zgc:152916", "protein_names_uniprotkb": "Protein Flattop; Cilia- and flagella-associated protein 126", "protein_names_refseq": "UPF0740 protein C1orf192 homolog; protein Flattop", "tax_id": 7955, "disease": "", "pathway": " (dre:751706)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC122100.1, CO931165.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505389, SAMEA3505393 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC122100.1., [RefSeq]; Microtubule inner protein (MIP) part of the dynein-decorated doublet microtubules (DMTs) in cilia axoneme. Acts as a regulator of cilium basal body docking and positioning in mono- and multiciliated cells. Regulates basal body docking and cilia formation in multiciliated lung cells. Regulates kinocilium positioning and stereocilia bundle morphogenesis in the inner ear., [UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005929 cilium;GO:0016324 apical plasma membrane;GO:0036064 ciliary basal body;GO:0005879 axonemal microtubule", "go_biological_process": "GO:0044782 cilium organization", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q0P4F6-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q0V947-1", "uniprot_id": [ { "id": "T161A_DANRE", "url": "https://www.uniprot.org/uniprot/Q0V947", "type": "external" } ], "mass": 55650.0, "length": 495, "protein_name": "Transmembrane protein 161A", "gene_name": "tmem161a", "organism": "Zebrafish", "refseq_name": "transmembrane protein 161A precursor", "refseq_ac": [ { "id": "NP_001037782", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001037782", "type": "external" } ], "gene_names_uniprotkb": "tmem161a; im:7149790; si:dkey-11n6.2; zgc:152766", "gene_names_refseq": "im:7149790; si:dkey-11n6.2; tmem161a; zgc:152766", "protein_names_uniprotkb": "Transmembrane protein 161A", "protein_names_refseq": "transmembrane protein 161A precursor", "tax_id": 7955, "disease": "", "pathway": " (dre:492692)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "23594743", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC121758.1, BC092999.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC121758.1. On or before Aug 25, 2006 this sequence version replaced XP_707892.1, XP_685371.1., [RefSeq]; May play a role in protection against oxidative stress., [UniProtKB]", "predicted_glycosites": 2, "predicted_n_glycosites": 1, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 2, "binding_glycan_count": 0, "secondary_ac_list": "Q1LVH8;Q567V8", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0016020 membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q0V947-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000011000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1AMT3-1", "uniprot_id": [ { "id": "FAB1A_DANRE", "url": "https://www.uniprot.org/uniprot/Q1AMT3", "type": "external" } ], "mass": 14080.0, "length": 127, "protein_name": "Fatty acid binding protein 1-A, liver", "gene_name": "fabp1a", "organism": "Zebrafish", "refseq_name": "fatty acid binding protein 1-A, liver", "refseq_ac": [ { "id": "NP_001038177", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001038177", "type": "external" } ], "gene_names_uniprotkb": "fabp1a", "gene_names_refseq": "L-FABP; fabp1a; fabp1", "protein_names_uniprotkb": "Fatty acid binding protein 1-A, liver", "protein_names_refseq": "fatty acid binding protein 1, liver; fatty acid binding protein 1-A, liver; lfabp", "tax_id": 7955, "disease": "hypertension (Disease Ontology:DOID:10763); IgA glomerulonephritis (Disease Ontology:DOID:2986); end stage renal disease (Disease Ontology:DOID:783)", "pathway": " (dre:791610)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "12815620;16857010", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: EB959609.1, DN893404.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505390, SAMEA4476732 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000005.1. On Aug 30, 2006 this sequence version replaced XP_685682.1. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications., [RefSeq]; Binds free fatty acids and their coenzyme A derivatives, bilirubin, and some other small molecules in the cytoplasm. May be involved in intracellular lipid transport (By similarity)., [UniProtKB, UniProtKB]; Combinatorial interactions between multiple regulatory factors are responsible for the gene expression of L-FABP in the liver, [RefSeq, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 3, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0005504 fatty acid binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005829 cytosol", "go_biological_process": "GO:0015908 fatty acid transport", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "Q1AMT3-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1ECV8-1", "uniprot_id": [ { "id": "TPL2A_DANRE", "url": "https://www.uniprot.org/uniprot/Q1ECV8", "type": "external" } ], "mass": 21355.0, "length": 186, "protein_name": "Tumor necrosis factor, alpha-induced protein 8-like protein 2 A", "gene_name": "tnfaip8l2a", "organism": "Zebrafish", "refseq_name": "tumor necrosis factor, alpha-induced protein 8-like protein 2 A", "refseq_ac": [ { "id": "NP_001038766", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001038766", "type": "external" } ], "gene_names_uniprotkb": "tnfaip8l2a; si:dkey-24a7.9; zgc:136816", "gene_names_refseq": "TIPE2 A; tnfaip8l2a; tnfaip8l2b; zgc:136816", "protein_names_uniprotkb": "Tumor necrosis factor, alpha-induced protein 8-like protein 2 A; TIPE2 A; TNF alpha-induced protein 8-like protein 2 A; TNFAIP8-like protein 2 A", "protein_names_refseq": "TIPE2 B; TNF alpha-induced protein 8-like protein 2 A; TNFAIP8-like protein 2 A; TNFAIP8-like protein 2 B; tumor necrosis factor, alpha-induced protein 8-like 2; tumor necrosis factor, alpha-induced protein 8-like protein 2 A; tumor necrosis factor, alpha-induced protein 8-like protein 2 B", "tax_id": 7955, "disease": "", "pathway": " (dre:723996)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "23594743", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC117652.1, CN323224.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC117652.1., [RefSeq]; Acts as a negative regulator of innate and adaptive immunity by maintaining immune homeostasis. Negative regulator of Toll-like receptor and T-cell receptor function. Prevents hyperresponsiveness of the immune system and maintains immune homeostasis. Inhibits jun/ap1 and NF-kappa-B activation. Promotes Fas-induced apoptosis (By similarity)., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005737 cytoplasm", "go_biological_process": "GO:0045087 innate immune response;GO:0050728 negative regulation of inflammatory response;GO:0042981 regulation of apoptotic process;GO:1902531 regulation of intracellular signal transduction;GO:0050868 negative regulation of T cell activation", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q1ECV8-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1ECW6-1", "uniprot_id": [ { "id": "LEGL_DANRE", "url": "https://www.uniprot.org/uniprot/Q1ECW6", "type": "external" } ], "mass": 18459.0, "length": 164, "protein_name": "Galectin-related protein", "gene_name": "lgalsl", "organism": "Zebrafish", "refseq_name": "galectin-related protein", "refseq_ac": [ { "id": "NP_001038765", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001038765", "type": "external" } ], "gene_names_uniprotkb": "lgalsl; grp; zgc:136758", "gene_names_refseq": "grp; lgalsla; lgalsl; zgc:136758", "protein_names_uniprotkb": "Galectin-related protein; Lectin galactoside-binding-like protein", "protein_names_refseq": "galectin-related protein; lectin galactoside-binding-like protein", "tax_id": 7955, "disease": "", "pathway": " (dre:723995)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC117644.1, CK018442.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505381 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC117644.1., [RefSeq]; Does not bind lactose, and may not bind carbohydrates., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0030246 carbohydrate binding", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q1ECW6-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1ECY2-1", "uniprot_id": [ { "id": "HXBDA_DANRE", "url": "https://www.uniprot.org/uniprot/Q1ECY2", "type": "external" } ], "mass": 33773.0, "length": 303, "protein_name": "Homeobox protein Hox-B13a", "gene_name": "hoxb13a", "organism": "Zebrafish", "refseq_name": "homeobox protein Hox-B13a", "refseq_ac": [ { "id": "NP_001038377", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001038377", "type": "external" } ], "gene_names_uniprotkb": "hoxb13a; zgc:136601", "gene_names_refseq": "hoxb13a; zgc:136601", "protein_names_uniprotkb": "Homeobox protein Hox-B13a", "protein_names_refseq": "homeo box B13a; homeobox protein Hox-B13a", "tax_id": 7955, "disease": "ductal carcinoma in situ (Disease Ontology:DOID:0060074); prostate cancer (Disease Ontology:DOID:10283); endometrial cancer (Disease Ontology:DOID:1380); cervical cancer (Disease Ontology:DOID:4362); renal cell carcinoma (Disease Ontology:DOID:4450)", "pathway": " (dre:559921)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "16174031", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC117625.1, DQ060545.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC117625.1. On Sep 1, 2006 this sequence version replaced XP_688409.1. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications., [RefSeq]; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis., [UniProtKB, UniProtKB]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 5, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "Q4PR98", "ec_number_list": [], "go_molecular_function": "GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding;GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006357 regulation of transcription by RNA polymerase II;GO:0031101 fin regeneration", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q1ECY2-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1ED21-1", "uniprot_id": [ { "id": "NR2CA_DANRE", "url": "https://www.uniprot.org/uniprot/Q1ED21", "type": "external" } ], "mass": 16130.0, "length": 141, "protein_name": "Nuclear receptor 2C2-associated protein", "gene_name": "nr2c2ap", "organism": "Zebrafish", "refseq_name": "nuclear receptor 2C2-associated protein", "refseq_ac": [ { "id": "NP_001038792", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001038792", "type": "external" } ], "gene_names_uniprotkb": "nr2c2ap; ch211-125m10.4; si:ch211-125m10.4; tra16; zgc:136330", "gene_names_refseq": "nr2c2ap; si:ch211-125m10.4; zgc:136330", "protein_names_uniprotkb": "Nuclear receptor 2C2-associated protein; TR4 orphan receptor-associated 16 kDa protein homolog", "protein_names_refseq": "TR4 orphan receptor-associated 16 kDa protein homolog; nuclear receptor 2C2-associated protein", "tax_id": 7955, "disease": "", "pathway": " (dre:724051)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "23594743", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC117584.1, EH545848.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505375, SAMEA3505377 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC117584.1., [RefSeq]; May act as a repressor of nr2c2-mediated transactivation by suppressing the binding between nr2c2 and its response element in target genes., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A3KQI6;Q4VBI9", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q1ED21-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1JPS1-1", "uniprot_id": [ { "id": "PCF5B_DANRE", "url": "https://www.uniprot.org/uniprot/Q1JPS1", "type": "external" } ], "mass": 27248.0, "length": 232, "protein_name": "Polycomb group RING finger protein 5-B", "gene_name": "pcgf5b", "organism": "Zebrafish", "refseq_name": "polycomb group RING finger protein 5-B", "refseq_ac": [ { "id": "NP_001038700", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001038700", "type": "external" } ], "gene_names_uniprotkb": "pcgf5b; pcgf5; zgc:136815", "gene_names_refseq": "pcgf5b; pcgf5; zgc:136815", "protein_names_uniprotkb": "Polycomb group RING finger protein 5-B", "protein_names_refseq": "polycomb group RING finger protein 5-B; polycomb group RING finger protein 5; polycomb group ring finger 5", "tax_id": 7955, "disease": "", "pathway": " (dre:692252); (R-DRE-8939243)", "pathway_count": 2, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC116619.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC116619.1., [RefSeq]; Component of Polycomb group (PcG) multiprotein complexes; the complex class is required to maintain the transcriptionally repressive state of some genes., [UniProtKB]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0008270 zinc ion binding", "go_cellular_component": "GO:0031519 PcG protein complex;GO:0035102 PRC1 complex", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006357 regulation of transcription by RNA polymerase II;GO:0007399 nervous system development", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q1JPS1-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1JPW9-1", "uniprot_id": [ { "id": "SPRN_DANRE", "url": "https://www.uniprot.org/uniprot/Q1JPW9", "type": "external" } ], "mass": 13858.0, "length": 132, "protein_name": "Shadow of prion protein", "gene_name": "sprn", "organism": "Zebrafish", "refseq_name": "shadow of prion protein precursor", "refseq_ac": [ { "id": "NP_945332", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_945332", "type": "external" } ], "gene_names_uniprotkb": "sprn", "gene_names_refseq": "Sho1; Sho; p12; sprna; sprn", "protein_names_uniprotkb": "Shadow of prion protein; Protein shadoo", "protein_names_refseq": "protein shadoo; shadoo; shadow of prion protein 1; shadow of prion protein precursor", "tax_id": 7955, "disease": "", "pathway": " (dre:386702)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "14527721", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC116568.1, BC094981.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505375, SAMEA3505385 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC116568.1. On or before Jul 25, 2007 this sequence version replaced NP_001019814.2, NP_945332.1., [RefSeq]; Prion-like protein that has PrP(C)-like neuroprotective activity., [UniProtKB]", "predicted_glycosites": 1, "predicted_n_glycosites": 1, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "Q70YK5", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005886 plasma membrane;GO:0098552 side of membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q1JPW9-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000010000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1JPY8-1", "uniprot_id": [ { "id": "PSPC1_DANRE", "url": "https://www.uniprot.org/uniprot/Q1JPY8", "type": "external" } ], "mass": 57698.0, "length": 512, "protein_name": "Paraspeckle component 1", "gene_name": "pspc1", "organism": "Zebrafish", "refseq_name": "paraspeckle component 1", "refseq_ac": [ { "id": "NP_001038723", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001038723", "type": "external" } ], "gene_names_uniprotkb": "pspc1; zgc:136470", "gene_names_refseq": "fj85a06; pspc1; wu:fj85a06; zgc:136470", "protein_names_uniprotkb": "Paraspeckle component 1", "protein_names_refseq": "paraspeckle component 1", "tax_id": 7955, "disease": "", "pathway": " (dre:692285)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC116549.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC116549.1., [RefSeq]; RNA-binding protein required for the formation of nuclear paraspeckles. Binds to poly(A), poly(G) and poly(U) RNA homopolymers., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0003723 RNA binding", "go_cellular_component": "GO:0005634 nucleus;GO:0016607 nuclear speck;GO:0042382 paraspeckles", "go_biological_process": "GO:0006355 regulation of DNA-templated transcription;GO:0042752 regulation of circadian rhythm", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q1JPY8-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1JPZ7-1", "uniprot_id": [ { "id": "PRP39_DANRE", "url": "https://www.uniprot.org/uniprot/Q1JPZ7", "type": "external" } ], "mass": 85947.0, "length": 752, "protein_name": "Pre-mRNA-processing factor 39", "gene_name": "prpf39", "organism": "Zebrafish", "refseq_name": "pre-mRNA-processing factor 39", "refseq_ac": [ { "id": "NP_001004520", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001004520", "type": "external" } ], "gene_names_uniprotkb": "prpf39; fa10d07; si:dz261o22.3; wu:fa10d07", "gene_names_refseq": "fa10d07; prpf39; si:dz261o22.3; wu:fa10d07", "protein_names_uniprotkb": "Pre-mRNA-processing factor 39; PRP39 homolog", "protein_names_refseq": "PRP39 homolog; pre-mRNA processing; pre-mRNA-processing factor 39", "tax_id": 7955, "disease": "", "pathway": " (dre:368864)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "23594743;40044042", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC116540.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AL591492.11., [RefSeq]; Involved in pre-mRNA splicing., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 1, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 1, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 1, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 1, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 0, "biomarker_type": "", "glycan_count": 1, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q801W4", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005685 U1 snRNP;GO:0005634 nucleus;GO:0000243 commitment complex;GO:0071004 U2-type prespliceosome", "go_biological_process": "GO:0000395 mRNA 5'-splice site recognition", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "Q1JPZ7-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0100000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1JQ66-1", "uniprot_id": [ { "id": "S35E3_DANRE", "url": "https://www.uniprot.org/uniprot/Q1JQ66", "type": "external" } ], "mass": 35151.0, "length": 313, "protein_name": "Solute carrier family 35 member E3", "gene_name": "slc35e3", "organism": "Zebrafish", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "slc35e3; si:dkeyp-86a5.1", "gene_names_refseq": "", "protein_names_uniprotkb": "Solute carrier family 35 member E3", "protein_names_refseq": "", "tax_id": 7955, "disease": "", "pathway": " (dre:563675)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "27189481;27658201;28694436;35134499", "class_list": "", "function": "Putative transporter., [UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0015297 antiporter activity;GO:0005338 nucleotide-sugar transmembrane transporter activity", "go_cellular_component": "GO:0005794 Golgi apparatus;GO:0016020 membrane", "go_biological_process": "GO:0055085 transmembrane transport", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "Q1JQ66-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1L873-1", "uniprot_id": [ { "id": "Q1L873_DANRE", "url": "https://www.uniprot.org/uniprot/Q1L873", "type": "external" } ], "mass": 34739.0, "length": 299, "protein_name": "Sulfotransferase", "gene_name": "sult3st5", "organism": "Zebrafish", "refseq_name": "sulfotransferase family 3, cytosolic sulfotransferase 5", "refseq_ac": [ { "id": "NP_001076344", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001076344", "type": "external" } ], "gene_names_uniprotkb": "sult3st5; si:dkey-236e20.3", "gene_names_refseq": "si:dkey-236e20.3; sult3st5", "protein_names_uniprotkb": "Sulfotransferase; 2.8.2.-", "protein_names_refseq": "novel sulfotransferase family protein; sulfotransferase family 3, cytosolic sulfotransferase 5", "tax_id": 7955, "disease": "", "pathway": " (dre:571440)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "22360938;28807679", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: SRR32588717.6518477.1, SRR32588732.10655199.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505371, SAMEA3505373 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000022.1. On Mar 15, 2007 this sequence version replaced XP_700120.2., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NC24;E9QDZ1", "ec_number_list": [], "go_molecular_function": "GO:0008146 sulfotransferase activity", "go_cellular_component": "GO:0005737 cytoplasm", "go_biological_process": "GO:0051923 sulfation;GO:0006805 xenobiotic metabolic process;GO:0006584 catecholamine metabolic process", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "Q1L873-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1L875-1", "uniprot_id": [ { "id": "Q1L875_DANRE", "url": "https://www.uniprot.org/uniprot/Q1L875", "type": "external" } ], "mass": 34927.0, "length": 299, "protein_name": "Sulfotransferase", "gene_name": "sult3st2", "organism": "Zebrafish", "refseq_name": "sulfotransferase family 3, cytosolic sulfotransferase 2", "refseq_ac": [ { "id": "NP_001073416", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001073416", "type": "external" } ], "gene_names_uniprotkb": "sult3st2; fb60e03; si:dkey-236e20.5; wu:fb60e03", "gene_names_refseq": "fb60e03; si:dkey-236e20.5; sult3st2; wu:fb60e03", "protein_names_uniprotkb": "Sulfotransferase; 2.8.2.-", "protein_names_refseq": "sulfotransferase family 3, cytosolic sulfotransferase 2", "tax_id": 7955, "disease": "", "pathway": " (dre:322415)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "18644423;19995333;20446911;21445457;22360938;27189481;28807679", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: EH508589.1, SRR32588725.28603480.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000022.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NCG1", "ec_number_list": [], "go_molecular_function": "GO:0008146 sulfotransferase activity", "go_cellular_component": "GO:0005737 cytoplasm", "go_biological_process": "GO:0051923 sulfation;GO:0006805 xenobiotic metabolic process;GO:0006584 catecholamine metabolic process", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q1L875-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1L876-1", "uniprot_id": [ { "id": "Q1L876_DANRE", "url": "https://www.uniprot.org/uniprot/Q1L876", "type": "external" } ], "mass": 37879.0, "length": 320, "protein_name": "rRNA biogenesis protein RRP36", "gene_name": "rrp36", "organism": "Zebrafish", "refseq_name": "ribosomal RNA processing protein 36 homolog", "refseq_ac": [ { "id": "NP_001073413", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001073413", "type": "external" } ], "gene_names_uniprotkb": "rrp36; cb268; sb:cb268; si:dkey-236e20.6", "gene_names_refseq": "cb268; rrp36; sb:cb268; si:dkey-236e20.6", "protein_names_uniprotkb": "rRNA biogenesis protein RRP36", "protein_names_refseq": "ribosomal RNA processing 36 homolog; ribosomal RNA processing protein 36 homolog", "tax_id": 7955, "disease": "", "pathway": " (dre:321183)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "23326453", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC142737.1, SRR32588733.1577279.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505371, SAMEA3505373 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000022.1., [RefSeq]; Component of the 90S pre-ribosome involved in the maturation of rRNAs. Required for early cleavages of the pre-RNAs in the 40S ribosomal subunit maturation pathway., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8N1YYD6", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005730 nucleolus;GO:0030686 90S preribosome", "go_biological_process": "GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q1L876-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1L881-1", "uniprot_id": [ { "id": "Q1L881_DANRE", "url": "https://www.uniprot.org/uniprot/Q1L881", "type": "external" } ], "mass": 102523.0, "length": 929, "protein_name": "SCY1-like protein 2", "gene_name": "scyl2", "organism": "Zebrafish", "refseq_name": "SCY1-like protein 2", "refseq_ac": [ { "id": "NP_001074268", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001074268", "type": "external" } ], "gene_names_uniprotkb": "scyl2; si:ch211-244b2.1", "gene_names_refseq": "scyl2; si:ch211-244b2.1", "protein_names_uniprotkb": "SCY1-like protein 2", "protein_names_refseq": "SCY1-like protein 2", "tax_id": 7955, "disease": "arthrogryposis multiplex congenita-4 (Disease Ontology:DOID:0080980)", "pathway": " (dre:557149)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "27189481", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC171604.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA4476730, SAMEA4476733 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CR936411.5. On Mar 11, 2007 this sequence version replaced XP_685247.2., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0A0R4IPS4;A0A8M2BC20", "ec_number_list": [], "go_molecular_function": "GO:0004672 protein kinase activity;GO:0005524 ATP binding", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q1L881-1", "record_type": "protein", "filter_code": "0000000.0000111.010000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1L894-1", "uniprot_id": [ { "id": "Q1L894_DANRE", "url": "https://www.uniprot.org/uniprot/Q1L894", "type": "external" } ], "mass": 13922.0, "length": 120, "protein_name": "Uncharacterized protein LOC799350 precursor", "gene_name": "si:ch211-191i18.4", "organism": "Zebrafish", "refseq_name": "uncharacterized protein LOC799350 precursor", "refseq_ac": [ { "id": "NP_001076400", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001076400", "type": "external" } ], "gene_names_uniprotkb": "si:ch211-191i18.4", "gene_names_refseq": "si:ch211-191i18.4", "protein_names_uniprotkb": "Uncharacterized protein LOC799350 precursor", "protein_names_refseq": "uncharacterized protein LOC799350 precursor", "tax_id": 7955, "disease": "", "pathway": " (dre:799350)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "12477932", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC152515.1, CO927476.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505387, SAMEA4476750 [ECO:0006172] ##Evidence-Data-END## PREDICTED REFSEQ: This record has not been reviewed and the function is unknown. The reference sequence was derived from JBMGRA010000019.1. On Mar 15, 2007 this sequence version replaced XP_001336784.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NC25", "ec_number_list": [], "go_molecular_function": "GO:0005184 neuropeptide hormone activity", "go_cellular_component": "GO:0005615 extracellular space", "go_biological_process": "GO:0007186 G protein-coupled receptor signaling pathway;GO:0043410 positive regulation of MAPK cascade;GO:0008343 adult feeding behavior;GO:0032099 negative regulation of appetite", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q1L894-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1L899-1", "uniprot_id": [ { "id": "INSY1_DANRE", "url": "https://www.uniprot.org/uniprot/Q1L899", "type": "external" } ], "mass": 31765.0, "length": 287, "protein_name": "Inhibitory synaptic factor 1", "gene_name": "insy1", "organism": "Zebrafish", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "insy1; si:dkey-105e17.1", "gene_names_refseq": "", "protein_names_uniprotkb": "Inhibitory synaptic factor 1; InSyn1", "protein_names_refseq": "", "tax_id": 7955, "disease": "", "pathway": " (dre:100003007)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "23594743", "class_list": "", "function": "May be a component of the protein machinery at the inhibitory synapses, probably acting as a scaffold., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0014069 postsynaptic density", "go_biological_process": "GO:0060080 inhibitory postsynaptic potential", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q1L899-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1L8B0-1", "uniprot_id": [ { "id": "Q1L8B0_DANRE", "url": "https://www.uniprot.org/uniprot/Q1L8B0", "type": "external" } ], "mass": 64351.0, "length": 567, "protein_name": "Sorting nexin-27", "gene_name": "snx27a", "organism": "Zebrafish", "refseq_name": "sorting nexin-27a", "refseq_ac": [ { "id": "NP_001038565", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001038565", "type": "external" } ], "gene_names_uniprotkb": "snx27a; si:dkeyp-39e9.2", "gene_names_refseq": "si:dkeyp-39e9.2; snx27a", "protein_names_uniprotkb": "Sorting nexin-27", "protein_names_refseq": "sorting nexin family member 27a; sorting nexin-27a", "tax_id": 7955, "disease": "", "pathway": " (dre:566205)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "12234666;22213104;26469318;28252024;31474562;34462354", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GFIL01039208.1, GDQH01010263.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000019.1. On Sep 1, 2006 this sequence version replaced XP_694568.1., [RefSeq]; Involved in the retrograde transport from endosome to plasma membrane, a trafficking pathway that promotes the recycling of internalized transmembrane proteins. Following internalization, endocytosed transmembrane proteins are delivered to early endosomes and recycled to the plasma membrane instead of being degraded in lysosomes. SNX27 specifically binds and directs sorting of a subset of transmembrane proteins containing a PDZ-binding motif at the C-terminus: following interaction with target transmembrane proteins, associates with the retromer complex, preventing entry into the lysosomal pathway, and promotes retromer-tubule based plasma membrane recycling. SNX27 also binds with the WASH complex. Interacts with membranes containing phosphatidylinositol-3-phosphate (PtdIns(3P)). May participate in establishment of natural killer cell polarity. Recruits CYTIP to early endosomes., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8N7UYA7", "ec_number_list": [], "go_molecular_function": "GO:0032266 phosphatidylinositol-3-phosphate binding;GO:0035091 phosphatidylinositol binding", "go_cellular_component": "GO:0005769 early endosome;GO:0005829 cytosol;GO:0031901 early endosome membrane", "go_biological_process": "GO:0006886 intracellular protein transport;GO:0007165 signal transduction;GO:0007409 axonogenesis;GO:0032456 endocytic recycling;GO:0030901 midbrain development", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q1L8B0-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1L8D2-1", "uniprot_id": [ { "id": "MANEL_DANRE", "url": "https://www.uniprot.org/uniprot/Q1L8D2", "type": "external" } ], "mass": 50313.0, "length": 442, "protein_name": "Glycoprotein endo-alpha-1,2-mannosidase-like protein", "gene_name": "maneal", "organism": "Zebrafish", "refseq_name": "glycoprotein endo-alpha-1,2-mannosidase-like protein", "refseq_ac": [ { "id": "NP_001038579", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001038579", "type": "external" } ], "gene_names_uniprotkb": "maneal; si:ch211-30b16.2", "gene_names_refseq": "maneal; si:ch211-30b16.2", "protein_names_uniprotkb": "Glycoprotein endo-alpha-1,2-mannosidase-like protein; 3.2.1.-", "protein_names_refseq": "glycoprotein endo-alpha-1,2-mannosidase-like protein", "tax_id": 7955, "disease": "", "pathway": " (dre:566679)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "23594743", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GFIL01025780.1, SRR32588733.978015.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505372 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000019.1. On Sep 1, 2006 this sequence version replaced XP_695055.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0004559 alpha-mannosidase activity", "go_cellular_component": "GO:0000139 Golgi membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q1L8D2-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1L8E1-1", "uniprot_id": [ { "id": "Q1L8E1_DANRE", "url": "https://www.uniprot.org/uniprot/Q1L8E1", "type": "external" } ], "mass": 71654.0, "length": 637, "protein_name": "RAD21 cohesin complex component b", "gene_name": "rad21b", "organism": "Zebrafish", "refseq_name": "RAD21 cohesin complex component b", "refseq_ac": [ { "id": "NP_001038585", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001038585", "type": "external" } ], "gene_names_uniprotkb": "rad21b; si:ch211-246f9.1", "gene_names_refseq": "rad21b; si:ch211-246f9.1", "protein_names_uniprotkb": "RAD21 cohesin complex component b", "protein_names_refseq": "RAD21 cohesin complex component b; RAD21 homolog b", "tax_id": 7955, "disease": "oral squamous cell carcinoma (Disease Ontology:DOID:0050866); colorectal carcinoma (Disease Ontology:DOID:0080199); Cornelia de Lange syndrome 4 (Disease Ontology:DOID:0080508); endometrial cancer (Disease Ontology:DOID:1380); lung non-small cell carcinoma (Disease Ontology:DOID:3908); hepatocellular carcinoma (Disease Ontology:DOID:684)", "pathway": " (dre:566831); (R-DRE-2467813); (R-DRE-2468052); (R-DRE-2470946); (R-DRE-2500257); (R-DRE-3108214)", "pathway_count": 6, "publication_count": 4, "publication_id_list": "26469318;34138874;34735227;38369890", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: SRR32588725.39415363.1, GDQH01022663.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000019.1. On Sep 1, 2006 this sequence version replaced XP_695211.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 6, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NA31", "ec_number_list": [], "go_molecular_function": "GO:0003682 chromatin binding", "go_cellular_component": "GO:0005634 nucleus;GO:0008278 cohesin complex", "go_biological_process": "GO:0007059 chromosome segregation;GO:0007062 sister chromatid cohesion;GO:1990414 replication-born double-strand break repair via sister chromatid exchange", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "Q1L8E1-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1L8F4-1", "uniprot_id": [ { "id": "T178B_DANRE", "url": "https://www.uniprot.org/uniprot/Q1L8F4", "type": "external" } ], "mass": 33297.0, "length": 294, "protein_name": "Transmembrane protein 178B", "gene_name": "tmem178b", "organism": "Zebrafish", "refseq_name": "transmembrane protein 178B precursor", "refseq_ac": [ { "id": "NP_001002396", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001002396", "type": "external" } ], "gene_names_uniprotkb": "tmem178b; zgc:92710", "gene_names_refseq": "fi03b02; im:7136481; tmem178bb; tmem178b; wu:fi03b02; zgc:92710", "protein_names_uniprotkb": "Transmembrane protein 178B", "protein_names_refseq": "transmembrane protein 178-like; transmembrane protein 178B precursor; transmembrane protein 178B", "tax_id": 7955, "disease": "", "pathway": " (dre:436669)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "23594743", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC150449.1, GFIL01041035.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505381, SAMEA3505382 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000004.1. On Sep 1, 2010 this sequence version replaced NP_001002396.1. Sequence Note:., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A7E2P1;Q6DGZ4", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0016020 membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q1L8F4-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1L8H0-1", "uniprot_id": [ { "id": "LR14B_DANRE", "url": "https://www.uniprot.org/uniprot/Q1L8H0", "type": "external" } ], "mass": 59532.0, "length": 526, "protein_name": "Leucine-rich repeat-containing protein 14B", "gene_name": "lrrc14b", "organism": "Zebrafish", "refseq_name": "leucine-rich repeat-containing protein 14B", "refseq_ac": [ { "id": "NP_001038578", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001038578", "type": "external" } ], "gene_names_uniprotkb": "lrrc14b; si:dkey-231l1.3", "gene_names_refseq": "lrrc14b; si:dkey-231l1.3", "protein_names_uniprotkb": "Leucine-rich repeat-containing protein 14B", "protein_names_refseq": "leucine-rich repeat-containing protein 14-like; leucine-rich repeat-containing protein 14B", "tax_id": 7955, "disease": "", "pathway": " (dre:566643)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "23594743", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GFIL01025445.1, SRR32588725.29176374.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505378, SAMEA3505379 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000019.1. On Sep 1, 2006 this sequence version replaced XP_695013.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "GO:0008284 positive regulation of cell population proliferation;GO:0043066 negative regulation of apoptotic process;GO:0045892 negative regulation of DNA-templated transcription;GO:0045596 negative regulation of cell differentiation", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q1L8H0-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1L8I5-1", "uniprot_id": [ { "id": "Q1L8I5_DANRE", "url": "https://www.uniprot.org/uniprot/Q1L8I5", "type": "external" } ], "mass": 42678.0, "length": 370, "protein_name": "Uncharacterized protein LOC541499", "gene_name": "kcnj1a.2", "organism": "Zebrafish", "refseq_name": "uncharacterized protein LOC541499", "refseq_ac": [ { "id": "NP_001014334", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001014334", "type": "external" } ], "gene_names_uniprotkb": "kcnj1a.2; zgc:113361", "gene_names_refseq": "kcnj1a.2; zgc:113361", "protein_names_uniprotkb": "Uncharacterized protein LOC541499", "protein_names_refseq": "uncharacterized protein LOC541499", "tax_id": 7955, "disease": "Bartter disease type 2 (Disease Ontology:DOID:0110143); nephrotic syndrome (Disease Ontology:DOID:1184)", "pathway": " (dre:541499)", "pathway_count": 1, "publication_count": 3, "publication_id_list": "32471067;34558132;35134499", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: CK690781.1, EH582923.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505371, SAMEA3505380 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000018.1. On or before Jun 16, 2016 this sequence version replaced XP_005159339.1, NP_001014334.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 2, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1N4L2", "ec_number_list": [ { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "1.5.1.2", "url": "https://www.rhea-db.org/rhea/?query=ec:1.5.1.2", "type": "external" } ], "go_molecular_function": "GO:0005242 inward rectifier potassium channel activity", "go_cellular_component": "GO:0005886 plasma membrane;GO:0034702 monoatomic ion channel complex", "go_biological_process": "GO:0007399 nervous system development;GO:0034765 regulation of monoatomic ion transmembrane transport;GO:1990573 potassium ion import across plasma membrane", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "Q1L8I5-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1L8I9-1", "uniprot_id": [ { "id": "Q1L8I9_DANRE", "url": "https://www.uniprot.org/uniprot/Q1L8I9", "type": "external" } ], "mass": 42378.0, "length": 370, "protein_name": "Potassium inwardly rectifying channel subfamily J member 1a, tandem duplicate 6 isoform X1", "gene_name": "kcnj1a.6", "organism": "Zebrafish", "refseq_name": "potassium inwardly rectifying channel subfamily J member 1a, tandem duplicate 6", "refseq_ac": [ { "id": "NP_001038640", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001038640", "type": "external" } ], "gene_names_uniprotkb": "kcnj1a.6; si:ch211-241l24.7; si:ch211-244h7.8", "gene_names_refseq": "kcnj1a.6; si:ch211-241l24.7; si:ch211-244h7.8", "protein_names_uniprotkb": "Potassium inwardly rectifying channel subfamily J member 1a, tandem duplicate 6 isoform X1", "protein_names_refseq": "potassium inwardly rectifying channel subfamily J member 1a, tandem duplicate 6", "tax_id": 7955, "disease": "Bartter disease type 2 (Disease Ontology:DOID:0110143); nephrotic syndrome (Disease Ontology:DOID:1184)", "pathway": " (dre:569052)", "pathway_count": 1, "publication_count": 3, "publication_id_list": "27189481;32471067;34558132", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GFIL01013803.1, SRR32588723.3361472.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505372 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000018.1. On or before Jul 21, 2025 this sequence version replaced XP_005159341.1, NP_001038640.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 2, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M2B5T5", "ec_number_list": [ { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "1.5.1.2", "url": "https://www.rhea-db.org/rhea/?query=ec:1.5.1.2", "type": "external" } ], "go_molecular_function": "GO:0005242 inward rectifier potassium channel activity", "go_cellular_component": "GO:0005886 plasma membrane;GO:0034702 monoatomic ion channel complex", "go_biological_process": "GO:0007399 nervous system development;GO:0034765 regulation of monoatomic ion transmembrane transport;GO:1990573 potassium ion import across plasma membrane", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "Q1L8I9-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1L8N7-1", "uniprot_id": [ { "id": "Q1L8N7_DANRE", "url": "https://www.uniprot.org/uniprot/Q1L8N7", "type": "external" } ], "mass": 39353.0, "length": 344, "protein_name": "Mesoderm-specific transcript homolog protein isoform 1", "gene_name": "mest", "organism": "Zebrafish", "refseq_name": "mesoderm-specific transcript homolog protein isoform 1", "refseq_ac": [ { "id": "NP_571118", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_571118", "type": "external" } ], "gene_names_uniprotkb": "mest; Zpeg1; mest; peg1", "gene_names_refseq": "Zpeg1; mest; peg1/mest; peg1", "protein_names_uniprotkb": "Mesoderm-specific transcript homolog protein isoform 1", "protein_names_refseq": "alpha/beta hydroxylase; mesoderm-specific transcript homolog protein isoform 1", "tax_id": 7955, "disease": "Barth syndrome (Disease Ontology:DOID:0050476)", "pathway": " (dre:30242)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "16263186;26469318", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: AF194334.1, SRR32588716.688843.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000004.1. On Jun 17, 2016 this sequence version replaced NP_571118.1. Transcript Variant: This variant (1) represents the longer transcript and encodes the longer isoform (1). Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]; Here, we report identification of zebrafish (Danio rerio) gene mest, an ortholog of mammalian PEG1/MEST., [RefSeq, PubMed]; Plays an important role in enabling neurons to transition from bipolar to multipolar shapes, a process essential for their correct migration toward the cortical plate during brain development. This function is likely achieved through the regulation of N-cadherin-dependent cell adhesion and the modulation of Akt and canonical Wnt signaling pathways. Essential for the development and maintenance of meso-diencephalic dopaminergic (mdDA) neurons during development. Negatively regulates the canonical Wnt signaling pathway during adipogenic differentiation by reducing the glycosylation, maturation, and cell membrane localization of the Wnt coreceptor LRP6., [UniProtKB, UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8N7UZF8", "ec_number_list": [], "go_molecular_function": "GO:0016787 hydrolase activity", "go_cellular_component": "GO:0005789 endoplasmic reticulum membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "Q1L8N7-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1L8S9-1", "uniprot_id": [ { "id": "Q1L8S9_DANRE", "url": "https://www.uniprot.org/uniprot/Q1L8S9", "type": "external" } ], "mass": 150639.0, "length": 1411, "protein_name": "Zinc finger protein 687b", "gene_name": "znf687b", "organism": "Zebrafish", "refseq_name": "zinc finger protein 687b", "refseq_ac": [ { "id": "NP_001334602", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001334602", "type": "external" } ], "gene_names_uniprotkb": "znf687b; im:7144442; si:dkey-204a24.9", "gene_names_refseq": "im:7144442; si:dkey-204a24.9; znf687b", "protein_names_uniprotkb": "Zinc finger protein 687b", "protein_names_refseq": "zinc finger protein 687b", "tax_id": 7955, "disease": "Paget's disease of bone 6 (Disease Ontology:DOID:0081369)", "pathway": " (dre:100006039)", "pathway_count": 1, "publication_count": 3, "publication_id_list": "15520368;26469318;26849110", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GDQH01014853.1, SRR32588735.532590.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000019.1. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments., [RefSeq]; May be involved in transcriptional regulation., [UniProtKB, UniProtKB]", "predicted_glycosites": 3, "predicted_n_glycosites": 0, "predicted_o_glycosites": 3, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 3, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1P5K6", "ec_number_list": [], "go_molecular_function": "GO:0003677 DNA binding;GO:0008270 zinc ion binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "Q1L8S9-1", "record_type": "protein", "filter_code": "0000000.0000111.010000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1L8T8-1", "uniprot_id": [ { "id": "Q1L8T8_DANRE", "url": "https://www.uniprot.org/uniprot/Q1L8T8", "type": "external" } ], "mass": 162642.0, "length": 1506, "protein_name": "Zinc finger protein 865", "gene_name": "znf865", "organism": "Zebrafish", "refseq_name": "zinc finger protein 865", "refseq_ac": [ { "id": "NP_001076544", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001076544", "type": "external" } ], "gene_names_uniprotkb": "znf865; si:dkey-109n11.2", "gene_names_refseq": "si:dkey-109n11.2; znf865", "protein_names_uniprotkb": "Zinc finger protein 865", "protein_names_refseq": "novel zinc finger protein; zinc finger protein 865", "tax_id": 7955, "disease": "", "pathway": " (dre:100034513)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "25556858;26469318", "class_list": "", "function": "##Evidence-Data-START## Transcript is intronless :: SRR26395017.153964.1, SRR26395012.627569.1 [ECO:0000345] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000019.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M2B6A3", "ec_number_list": [], "go_molecular_function": "GO:0003700 DNA-binding transcription factor activity;GO:0008270 zinc ion binding;GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006357 regulation of transcription by RNA polymerase II", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "Q1L8T8-1", "record_type": "protein", "filter_code": "0000000.0000101.010000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1L8X4-1", "uniprot_id": [ { "id": "Q1L8X4_DANRE", "url": "https://www.uniprot.org/uniprot/Q1L8X4", "type": "external" } ], "mass": 41552.0, "length": 369, "protein_name": "Vacuolar protein sorting-associated protein 72 homolog", "gene_name": "vps72a", "organism": "Zebrafish", "refseq_name": "vacuolar protein sorting 72 homolog a", "refseq_ac": [ { "id": "NP_001076413", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001076413", "type": "external" } ], "gene_names_uniprotkb": "vps72a; si:dkeyp-24a7.1; vps72", "gene_names_refseq": "si:dkeyp-24a7.1; vps72a; vps72", "protein_names_uniprotkb": "Vacuolar protein sorting-associated protein 72 homolog; Transcription factor-like 1", "protein_names_refseq": "vacuolar protein sorting 72 homolog a; vacuolar protein sorting 72, paralog a", "tax_id": 7955, "disease": "", "pathway": " (dre:100001285)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "26469318;27189481", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GDQQ01018689.1, GFIL01043127.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000019.1. On Mar 15, 2007 this sequence version replaced XP_001336151.1., [RefSeq]; Deposition-and-exchange histone chaperone specific for H2AZ1, specifically chaperones H2AZ1 and deposits it into nucleosomes. As component of the SRCAP complex, mediates the ATP-dependent exchange of histone H2AZ1/H2B dimers for nucleosomal H2A/H2B, leading to transcriptional regulation of selected genes by chromatin remodeling., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NDH2", "ec_number_list": [], "go_molecular_function": "GO:0140713 histone chaperone activity", "go_cellular_component": "GO:0000812 Swr1 complex", "go_biological_process": "GO:0006338 chromatin remodeling", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "Q1L8X4-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1L8Y5-1", "uniprot_id": [ { "id": "Q1L8Y5_DANRE", "url": "https://www.uniprot.org/uniprot/Q1L8Y5", "type": "external" } ], "mass": 51940.0, "length": 470, "protein_name": "Programmed cell death protein 4", "gene_name": "pdcd4b", "organism": "Zebrafish", "refseq_name": "programmed cell death protein 4b isoform X1", "refseq_ac": [ { "id": "XP_005161848", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005161848", "type": "external" } ], "gene_names_uniprotkb": "pdcd4b; cb45; pdcd4; sb:cb45; wu:fc84b08", "gene_names_refseq": "cb45; pdcd4b; pdcd4; sb:cb45; wu:fc84b08", "protein_names_uniprotkb": "Programmed cell death protein 4", "protein_names_refseq": "programmed cell death protein 4b isoform X1", "tax_id": 7955, "disease": "skin melanoma (Disease Ontology:DOID:8923)", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133197) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 2, "predicted_n_glycosites": 0, "predicted_o_glycosites": 2, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 2, "binding_glycan_count": 0, "secondary_ac_list": "A0A2R8QBU1", "ec_number_list": [], "go_molecular_function": "GO:0003723 RNA binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005829 cytosol", "go_biological_process": "GO:0003171 atrioventricular valve development;GO:0045892 negative regulation of DNA-templated transcription", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q1L8Y5-1", "record_type": "protein", "filter_code": "0000000.0000010.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1L908-1", "uniprot_id": [ { "id": "MSTO1_DANRE", "url": "https://www.uniprot.org/uniprot/Q1L908", "type": "external" } ], "mass": 64924.0, "length": 591, "protein_name": "Protein misato homolog 1", "gene_name": "msto1", "organism": "Zebrafish", "refseq_name": "protein misato homolog 1", "refseq_ac": [ { "id": "NP_956181", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_956181", "type": "external" } ], "gene_names_uniprotkb": "msto1; si:dkey-263h23.5; zgc:55470", "gene_names_refseq": "msto1; mst; wu:fi40a10; zgc:55470", "protein_names_uniprotkb": "Protein misato homolog 1", "protein_names_refseq": "misato 1, mitochondrial distribution and morphology regulator; misato homolog 1; protein misato homolog 1", "tax_id": 7955, "disease": "myotonia congenita (Disease Ontology:DOID:2106)", "pathway": " (dre:334306)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "23594743", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC044406.1, BC165238.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## ##RefSeq-Attributes-START## gene product(s) localized to mito. :: inferred from homology ##RefSeq-Attributes-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC044406.1., [RefSeq]; Involved in the regulation of mitochondrial distribution and morphology. Required for mitochondrial fusion and mitochondrial network formation., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q803N4", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005739 mitochondrion;GO:0005741 mitochondrial outer membrane", "go_biological_process": "GO:0007005 mitochondrion organization", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q1L908-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1L911-1", "uniprot_id": [ { "id": "NRM_DANRE", "url": "https://www.uniprot.org/uniprot/Q1L911", "type": "external" } ], "mass": 31181.0, "length": 275, "protein_name": "Nurim", "gene_name": "nrm", "organism": "Zebrafish", "refseq_name": "nurim", "refseq_ac": [ { "id": "NP_001038660", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001038660", "type": "external" } ], "gene_names_uniprotkb": "nrm; si:dkey-263h23.2", "gene_names_refseq": "nrm; si:dkey-263h23.2", "protein_names_uniprotkb": "Nurim; Nuclear envelope membrane protein; Nuclear rim protein", "protein_names_refseq": "nuclear envelope membrane protein; nuclear rim protein; nurim (nuclear envelope membrane protein; nurim", "tax_id": 7955, "disease": "alcohol dependence (Disease Ontology:DOID:0050741)", "pathway": " (dre:570027)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "23594743", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GFIL01028638.1, SRR26395013.687310.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505383, SAMEA3505393 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000019.1. On Sep 1, 2006 this sequence version replaced XP_698548.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005635 nuclear envelope;GO:0031965 nuclear membrane;GO:0005637 nuclear inner membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q1L911-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1L962-1", "uniprot_id": [ { "id": "Q1L962_DANRE", "url": "https://www.uniprot.org/uniprot/Q1L962", "type": "external" } ], "mass": 39595.0, "length": 345, "protein_name": "Uncharacterized protein LOC793537; Uncharacterized protein isoform X1", "gene_name": "si:dkey-211g8.1", "organism": "Zebrafish", "refseq_name": "uncharacterized protein LOC793537", "refseq_ac": [ { "id": "NP_001076360", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001076360", "type": "external" } ], "gene_names_uniprotkb": "si:dkey-211g8.1", "gene_names_refseq": "si:dkey-211g8.1", "protein_names_uniprotkb": "Uncharacterized protein LOC793537; Uncharacterized protein isoform X1", "protein_names_refseq": "uncharacterized protein LOC793537", "tax_id": 7955, "disease": "", "pathway": " (dre:793537)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "21873635", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: SRR32588722.46138720.1, SRR32588728.47598892.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA4476796, SAMN18715719 [ECO:0000348] ##Evidence-Data-END## PREDICTED REFSEQ: This record has not been reviewed and the function is unknown. The reference sequence was derived from JBMGRA010000019.1. On Mar 15, 2007 this sequence version replaced XP_001333320.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NDC9", "ec_number_list": [], "go_molecular_function": "GO:0004875 complement receptor activity;GO:0004930 G protein-coupled receptor activity", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "GO:0002430 complement receptor mediated signaling pathway;GO:0006935 chemotaxis;GO:0006954 inflammatory response;GO:0007204 positive regulation of cytosolic calcium ion concentration;GO:0007200 phospholipase C-activating G protein-coupled receptor signaling pathway", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q1L962-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1L986-1", "uniprot_id": [ { "id": "Q1L986_DANRE", "url": "https://www.uniprot.org/uniprot/Q1L986", "type": "external" } ], "mass": 24984.0, "length": 217, "protein_name": "small monomeric GTPase", "gene_name": "rab3b", "organism": "Zebrafish", "refseq_name": "ras-related protein Rab-3B", "refseq_ac": [ { "id": "XP_685654", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_685654", "type": "external" } ], "gene_names_uniprotkb": "rab3b", "gene_names_refseq": "rab3b", "protein_names_uniprotkb": "small monomeric GTPase; 3.6.5.2", "protein_names_refseq": "ras-related protein Rab-3B", "tax_id": 7955, "disease": "Smith-McCort dysplasia (Disease Ontology:DOID:0060247); Dyggve-Melchior-Clausen disease (Disease Ontology:DOID:0111167); alcohol use disorder (Disease Ontology:DOID:1574); epilepsy (Disease Ontology:DOID:1826)", "pathway": " (dre:557482); (R-DRE-8873719)", "pathway_count": 2, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133197) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Mar 30, 2010 this sequence version replaced XP_685654.2. COMPLETENESS: full length., [RefSeq]; The small GTPases Rab are key regulators of intracellular membrane trafficking, from the formation of transport vesicles to their fusion with membranes. Rabs cycle between an inactive GDP-bound form and an active GTP-bound form that is able to recruit to membranes different sets of downstream effectors directly responsible for vesicle formation, movement, tethering and fusion. RAB3D may be involved in the insulin-induced exocytosis of GLUT4-containing vesicles in adipocytes., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 4, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8N7T6K7", "ec_number_list": [ { "id": "3.6.5.2", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.5.2", "type": "external" }, { "id": "3.6.5.3", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.5.3", "type": "external" }, { "id": "3.6.5.5", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.5.5", "type": "external" }, { "id": "3.6.1.5", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.1.5", "type": "external" }, { "id": "3.6.5.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.5.-", "type": "external" }, { "id": "3.6.1.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.1.-", "type": "external" }, { "id": "3.6.5.4", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.5.4", "type": "external" } ], "go_molecular_function": "GO:0003924 GTPase activity;GO:0005525 GTP binding;GO:0046872 metal ion binding;GO:0031489 myosin V binding;GO:0003925 G protein activity", "go_cellular_component": "GO:0005768 endosome;GO:0005886 plasma membrane;GO:0030141 secretory granule;GO:0008021 synaptic vesicle", "go_biological_process": "GO:0015031 protein transport;GO:0006887 exocytosis;GO:0017157 regulation of exocytosis", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q1L986-1", "record_type": "protein", "filter_code": "0000000.0000011.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1L990-1", "uniprot_id": [ { "id": "CS012_DANRE", "url": "https://www.uniprot.org/uniprot/Q1L990", "type": "external" } ], "mass": 14686.0, "length": 141, "protein_name": "Protein C19orf12 homolog", "gene_name": "si:ch211-238a12.2; zgc:112052", "organism": "Zebrafish", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "si:ch211-238a12.2; zgc:112052", "gene_names_refseq": "", "protein_names_uniprotkb": "Protein C19orf12 homolog", "protein_names_refseq": "", "tax_id": 7955, "disease": "neurodegeneration with brain iron accumulation 4 (Disease Ontology:DOID:0110738); hereditary spastic paraplegia 43 (Disease Ontology:DOID:0110795)", "pathway": "", "pathway_count": 0, "publication_count": 2, "publication_id_list": "23594743;33425903", "class_list": "", "function": "May play a role in lipid metabolism and most probably in the transfer and/or utilization of lipids by the mitochondria., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 2, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q567H5", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005739 mitochondrion;GO:0005783 endoplasmic reticulum;GO:0005829 cytosol;GO:0031966 mitochondrial membrane", "go_biological_process": "GO:0048741 skeletal muscle fiber development;GO:0048666 neuron development", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "Q1L990-1", "record_type": "protein", "filter_code": "0000000.0000110.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1L9C7-1", "uniprot_id": [ { "id": "CA174_DANRE", "url": "https://www.uniprot.org/uniprot/Q1L9C7", "type": "external" } ], "mass": 20784.0, "length": 189, "protein_name": "UPF0688 protein C1orf174 homolog", "gene_name": "si:ch211-147a11.3", "organism": "Zebrafish", "refseq_name": "UPF0688 protein C1orf174 homolog", "refseq_ac": [ { "id": "NP_001038302", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001038302", "type": "external" } ], "gene_names_uniprotkb": "si:ch211-147a11.3; si:ch211-147a11.3; zgc:158389", "gene_names_refseq": "si:ch211-147a11.3; zgc:158389", "protein_names_uniprotkb": "UPF0688 protein C1orf174 homolog", "protein_names_refseq": "UPF0688 protein C1orf174 homolog", "tax_id": 7955, "disease": "", "pathway": " (dre:795658)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "23594743", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: CN022172.1, SRR32588722.37120698.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN01765705 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000008.1. On or before Sep 1, 2006 this sequence version replaced XP_684839.1, XP_707689.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A5PL76;A8KBU8;Q1L9C8", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q1L9C7-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1LU92-1", "uniprot_id": [ { "id": "Q1LU92_DANRE", "url": "https://www.uniprot.org/uniprot/Q1LU92", "type": "external" } ], "mass": 83547.0, "length": 754, "protein_name": "Alpha-catulin", "gene_name": "ctnnal1", "organism": "Zebrafish", "refseq_name": "alpha-catulin", "refseq_ac": [ { "id": "NP_001137526", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001137526", "type": "external" } ], "gene_names_uniprotkb": "ctnnal1; si:ch211-254e15.1", "gene_names_refseq": "ctnnal1; si:ch211-254e15.1", "protein_names_uniprotkb": "Alpha-catulin", "protein_names_refseq": "alpha-catulin", "tax_id": 7955, "disease": "", "pathway": " (dre:100034581)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "26015096;26469318;27189481;28252024", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GDQH01008247.1, GFIL01007562.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000019.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NSW6", "ec_number_list": [], "go_molecular_function": "GO:0051015 actin filament binding;GO:0045296 cadherin binding", "go_cellular_component": "GO:0005737 cytoplasm", "go_biological_process": "GO:0007155 cell adhesion;GO:0007266 Rho protein signal transduction", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "Q1LU92-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1LUA9-1", "uniprot_id": [ { "id": "Q1LUA9_DANRE", "url": "https://www.uniprot.org/uniprot/Q1LUA9", "type": "external" } ], "mass": 67026.0, "length": 686, "protein_name": "Collagen alpha-2(VIII) chain isoform X1; Collagen alpha-2(VIII) chain precursor", "gene_name": "col8a2", "organism": "Zebrafish", "refseq_name": "collagen alpha-2(VIII) chain precursor", "refseq_ac": [ { "id": "NP_001076370", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001076370", "type": "external" } ], "gene_names_uniprotkb": "col8a2; si:ch211-197n10.4", "gene_names_refseq": "col8a2; si:ch211-197n10.4", "protein_names_uniprotkb": "Collagen alpha-2(VIII) chain isoform X1; Collagen alpha-2(VIII) chain precursor", "protein_names_refseq": "collagen alpha-2(VIII) chain precursor", "tax_id": 7955, "disease": "posterior polymorphous corneal dystrophy 2 (Disease Ontology:DOID:0110856); Fuchs' endothelial dystrophy (Disease Ontology:DOID:11555)", "pathway": " (dre:794479); (R-DRE-1442490); (R-DRE-1650814); (R-DRE-2022090); (R-DRE-8948216)", "pathway_count": 5, "publication_count": 10, "publication_id_list": "23072875;25420467;26469318;27189481;28791256;30252882;30312775;30718621;31270539;36659403", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GDQH01017386.1, GFIL01004523.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA4476750, SAMEA4476803 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000019.1. On Mar 15, 2007 this sequence version replaced XP_001333722.1. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications., [RefSeq]", "predicted_glycosites": 2, "predicted_n_glycosites": 0, "predicted_o_glycosites": 2, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 2, "glyco_site_count": 2, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NDE0;A0AC58HZA0;A0AC58HZA3;A0AC58HZA7", "ec_number_list": [], "go_molecular_function": "GO:0030020 extracellular matrix structural constituent conferring tensile strength", "go_cellular_component": "GO:0031012 extracellular matrix", "go_biological_process": "GO:0030198 extracellular matrix organization", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "Q1LUA9-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1LUC1-1", "uniprot_id": [ { "id": "5MP1_DANRE", "url": "https://www.uniprot.org/uniprot/Q1LUC1", "type": "external" } ], "mass": 48325.0, "length": 421, "protein_name": "eIF5-mimic protein 1", "gene_name": "bzw2", "organism": "Zebrafish", "refseq_name": "eIF5-mimic protein 1", "refseq_ac": [ { "id": "NP_957212", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_957212", "type": "external" } ], "gene_names_uniprotkb": "bzw2; 5mp1; sb:eu935; si:ch211-210b19.1; zgc:55580", "gene_names_refseq": "bzw2; sb:eu935; zgc:55580", "protein_names_uniprotkb": "eIF5-mimic protein 1; Basic leucine zipper and W2 domain-containing protein 2", "protein_names_refseq": "DKEYP-25A3.4; basic leucine zipper and W2 domain-containing protein 2; eIF5-mimic protein 1", "tax_id": 7955, "disease": "", "pathway": " (dre:393892)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "23594743", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC048052.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC048052.1., [RefSeq]; Translation initiation regulator which may repress non-AUG initiated translation and repeat-associated non-AUG (RAN) initiated translation by acting as a competitive inhibitor of eukaryotic translation initiation factor 5 (EIF5) function., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q7ZUN5", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005737 cytoplasm", "go_biological_process": "GO:0006446 regulation of translational initiation", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q1LUC1-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1LUC2-1", "uniprot_id": [ { "id": "Q1LUC2_DANRE", "url": "https://www.uniprot.org/uniprot/Q1LUC2", "type": "external" } ], "mass": 23319.0, "length": 204, "protein_name": "Sclerostin domain-containing protein 1b precursor", "gene_name": "sostdc1b", "organism": "Zebrafish", "refseq_name": "sclerostin domain-containing protein 1b precursor", "refseq_ac": [ { "id": "NP_001076314", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001076314", "type": "external" } ], "gene_names_uniprotkb": "sostdc1b; si:dkeyp-25a3.6; sostdc1", "gene_names_refseq": "si:dkeyp-25a3.6; sostdc1b; sostdc1", "protein_names_uniprotkb": "Sclerostin domain-containing protein 1b precursor", "protein_names_refseq": "sclerostin domain containing 1; sclerostin domain-containing protein 1b precursor", "tax_id": 7955, "disease": "", "pathway": " (dre:564783)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "21873635", "class_list": "", "function": "##Evidence-Data-START## RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BX957237.11. On Mar 15, 2007 this sequence version replaced XP_693205.2., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1ND93", "ec_number_list": [], "go_molecular_function": "GO:0036122 BMP binding", "go_cellular_component": "GO:0005615 extracellular space", "go_biological_process": "GO:0030514 negative regulation of BMP signaling pathway;GO:0016055 Wnt signaling pathway;GO:0030178 negative regulation of Wnt signaling pathway", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q1LUC2-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1LUD1-1", "uniprot_id": [ { "id": "TM168_DANRE", "url": "https://www.uniprot.org/uniprot/Q1LUD1", "type": "external" } ], "mass": 76577.0, "length": 681, "protein_name": "Transmembrane protein 168-A", "gene_name": "tmem168a", "organism": "Zebrafish", "refseq_name": "transmembrane protein 168-A", "refseq_ac": [ { "id": "NP_001076555", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001076555", "type": "external" } ], "gene_names_uniprotkb": "tmem168a; si:dkey-192l17.1; tmem168", "gene_names_refseq": "si:dkey-192l17.1; tmem168a; tmem168", "protein_names_uniprotkb": "Transmembrane protein 168-A", "protein_names_refseq": "transmembrane protein 168-A; transmembrane protein 168", "tax_id": 7955, "disease": "", "pathway": " (dre:100034546)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "23594743", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: SRR26395062.213957.1, SRR32588726.31186501.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505377, SAMEA3505378 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000004.1. On Jun 5, 2025 this sequence version replaced NP_001076555.1., [RefSeq]; Plays a key role in maintaining the cardiac electrical stability by modulating cell surface expression of SCN5A., [UniProtKB, UniProtKB]", "predicted_glycosites": 1, "predicted_n_glycosites": 1, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0017080 sodium channel regulator activity", "go_cellular_component": "GO:0031965 nuclear membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q1LUD1-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000010000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1LUK1-1", "uniprot_id": [ { "id": "MIC13_DANRE", "url": "https://www.uniprot.org/uniprot/Q1LUK1", "type": "external" } ], "mass": 11753.0, "length": 111, "protein_name": "MICOS complex subunit MIC13", "gene_name": "micos13", "organism": "Zebrafish", "refseq_name": "MICOS complex subunit MIC13", "refseq_ac": [ { "id": "NP_001038338", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001038338", "type": "external" } ], "gene_names_uniprotkb": "micos13; mic13; qil1; si:dkey-78l4.14", "gene_names_refseq": "im:7151185; mic13; micos13; qil1; si:dkey-78l4.14", "protein_names_uniprotkb": "MICOS complex subunit MIC13", "protein_names_refseq": "MICOS complex subunit MIC13; protein QIL1", "tax_id": 7955, "disease": "combined oxidative phosphorylation deficiency 37 (Disease Ontology:DOID:0111499)", "pathway": " (dre:558738)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "23594743", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: CO936478.1, EH434805.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505381 [ECO:0006172] ##Evidence-Data-END## ##RefSeq-Attributes-START## gene product(s) localized to mito. :: inferred from homology ##RefSeq-Attributes-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000022.1. On Sep 1, 2006 this sequence version replaced XP_687088.1., [RefSeq]; Component of the MICOS complex, a large protein complex of the mitochondrial inner membrane that plays crucial roles in the maintenance of crista junctions, inner membrane architecture, and formation of contact sites to the outer membrane. Constituent of mature MICOS complex, it is required for the formation of cristae junction (CJ) and maintenance of cristae morphology. Required for the incorporation of MIC10 into the MICOS complex., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q1LUK0", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005743 mitochondrial inner membrane;GO:0044284 mitochondrial crista junction;GO:0061617 MICOS complex", "go_biological_process": "GO:0042407 cristae formation", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q1LUK1-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1LUN9-1", "uniprot_id": [ { "id": "Q1LUN9_DANRE", "url": "https://www.uniprot.org/uniprot/Q1LUN9", "type": "external" } ], "mass": 106389.0, "length": 935, "protein_name": "Gamma-aminobutyric acid type B receptor subunit 2 precursor", "gene_name": "gabbr2", "organism": "Zebrafish", "refseq_name": "gamma-aminobutyric acid type B receptor subunit 2 precursor", "refseq_ac": [ { "id": "NP_001137515", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001137515", "type": "external" } ], "gene_names_uniprotkb": "gabbr2; si:dkey-190l1.2", "gene_names_refseq": "gabbr2; si:dkey-190l1.2", "protein_names_uniprotkb": "Gamma-aminobutyric acid type B receptor subunit 2 precursor", "protein_names_refseq": "gamma-aminobutyric acid type B receptor subunit 2 precursor", "tax_id": 7955, "disease": "nicotine dependence (Disease Ontology:DOID:0050742); developmental and epileptic encephalopathy 59 (Disease Ontology:DOID:0080291); alcohol use disorder (Disease Ontology:DOID:1574)", "pathway": " (dre:560267)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "22207143;26688189;27189481;27453477;28252024;33979209;35202345;37207274;38366571;39021799", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GFIL01011095.1, SRR26395013.130427.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505389, SAMEA4476730 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000019.1. On Jan 23, 2009 this sequence version replaced XP_688755.3. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 3, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8N7UZ79", "ec_number_list": [], "go_molecular_function": "GO:0004965 G protein-coupled GABA receptor activity", "go_cellular_component": "GO:0045211 postsynaptic membrane;GO:0038039 G protein-coupled receptor heterodimeric complex", "go_biological_process": "GO:0007214 gamma-aminobutyric acid signaling pathway", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "Q1LUN9-1", "record_type": "protein", "filter_code": "0000000.0000111.010000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1LUQ4-1", "uniprot_id": [ { "id": "MFD6A_DANRE", "url": "https://www.uniprot.org/uniprot/Q1LUQ4", "type": "external" } ], "mass": 88232.0, "length": 793, "protein_name": "Major facilitator superfamily domain-containing protein 6-A", "gene_name": "mfsd6a", "organism": "Zebrafish", "refseq_name": "major facilitator superfamily domain-containing protein 6-A", "refseq_ac": [ { "id": "NP_001076525", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001076525", "type": "external" } ], "gene_names_uniprotkb": "mfsd6a; mfsd6; mmr2; si:dkey-188p4.2", "gene_names_refseq": "mfsd6a; mfsd6; si:dkey-188p4.2", "protein_names_uniprotkb": "Major facilitator superfamily domain-containing protein 6-A; Macrophage MHC class I receptor 2 homolog A", "protein_names_refseq": "macrophage MHC class I receptor 2 homolog A; major facilitator superfamily domain containing 6; major facilitator superfamily domain-containing protein 6-A; major facilitator superfamily domain-containing protein 6; mfds6", "tax_id": 7955, "disease": "", "pathway": " (dre:100034426)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "23594743", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: SRR32588717.21124823.1, SRR32588729.26617639.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000022.1., [RefSeq]", "predicted_glycosites": 2, "predicted_n_glycosites": 0, "predicted_o_glycosites": 2, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 2, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "GO:0042590 antigen processing and presentation of exogenous peptide antigen via MHC class I", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q1LUQ4-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1LUS8-1", "uniprot_id": [ { "id": "RBP10_DANRE", "url": "https://www.uniprot.org/uniprot/Q1LUS8", "type": "external" } ], "mass": 66486.0, "length": 604, "protein_name": "Ran-binding protein 10", "gene_name": "ranbp10", "organism": "Zebrafish", "refseq_name": "ran-binding protein 10", "refseq_ac": [ { "id": "NP_001038515", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001038515", "type": "external" } ], "gene_names_uniprotkb": "ranbp10; si:ch211-193l7.1; si:dkey-16n13.2", "gene_names_refseq": "ranbp10; si:ch211-193l7.1", "protein_names_uniprotkb": "Ran-binding protein 10; RanBP10", "protein_names_refseq": "ran-binding protein 10", "tax_id": 7955, "disease": "", "pathway": " (dre:793293); (R-DRE-8851805)", "pathway_count": 2, "publication_count": 1, "publication_id_list": "23594743", "class_list": "", "function": "##Evidence-Data-START## RNAseq introns :: partial sample support SAMEA3505370, SAMEA3505371 [ECO:0000350] ##Evidence-Data-END## ##RefSeq-Attributes-START## inferred exon combination :: based on alignments, homology ##RefSeq-Attributes-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000018.1. On or before Sep 1, 2006 this sequence version replaced XP_709657.1, XP_709658.1, XP_692736.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]; May act as an adapter protein to couple membrane receptors to intracellular signaling pathways., [UniProtKB]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A5WVR4", "ec_number_list": [], "go_molecular_function": "GO:0030674 protein-macromolecule adaptor activity;GO:0005085 guanyl-nucleotide exchange factor activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0034657 GID complex", "go_biological_process": "GO:0007010 cytoskeleton organization;GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q1LUS8-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1LUU5-1", "uniprot_id": [ { "id": "Q1LUU5_DANRE", "url": "https://www.uniprot.org/uniprot/Q1LUU5", "type": "external" } ], "mass": 72258.0, "length": 671, "protein_name": "Zinc finger and BTB domain-containing protein 22b", "gene_name": "zbtb22b", "organism": "Zebrafish", "refseq_name": "zinc finger and BTB domain-containing protein 22b", "refseq_ac": [ { "id": "NP_001298276", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001298276", "type": "external" } ], "gene_names_uniprotkb": "zbtb22b; BING1; fj98b06; wu:fj98b06; zbtb22; znf297", "gene_names_refseq": "BING1; fj98b06; wu:fj98b06; zbtb22b; zbtb22; znf297", "protein_names_uniprotkb": "Zinc finger and BTB domain-containing protein 22b", "protein_names_refseq": "zinc finger and BTB domain containing 22; zinc finger and BTB domain-containing protein 22b; zinc finger protein 297", "tax_id": 7955, "disease": "", "pathway": " (dre:64809)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "10849368;12869198;19159490;20102740;21346254;24291825;26469318;27189481;33279476", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: SRR26395017.1024176.1, SRR26395063.952744.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505373, SAMEA4476729 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from EH594603.1 and JBMGRA010000019.1. On Aug 8, 2015 this sequence version replaced XP_689543.1. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1P6X4", "ec_number_list": [], "go_molecular_function": "GO:0008270 zinc ion binding;GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding;GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006357 regulation of transcription by RNA polymerase II", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "Q1LUU5-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1LUV0-1", "uniprot_id": [ { "id": "Q1LUV0_DANRE", "url": "https://www.uniprot.org/uniprot/Q1LUV0", "type": "external" } ], "mass": 41605.0, "length": 384, "protein_name": "Uncharacterized protein LOC571127 precursor", "gene_name": "si:ch211-262h13.5", "organism": "Zebrafish", "refseq_name": "uncharacterized protein LOC571127 precursor", "refseq_ac": [ { "id": "NP_001038677", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001038677", "type": "external" } ], "gene_names_uniprotkb": "si:ch211-262h13.5; zgc:152985", "gene_names_refseq": "si:ch211-262h13.5; zgc:152985", "protein_names_uniprotkb": "Uncharacterized protein LOC571127 precursor", "protein_names_refseq": "uncharacterized protein LOC571127 precursor", "tax_id": 7955, "disease": "", "pathway": " (dre:571127); (R-DRE-114608); (R-DRE-75205)", "pathway_count": 3, "publication_count": 1, "publication_id_list": "26469318", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC139623.1, GDQH01016312.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## PREDICTED REFSEQ: This record has not been reviewed and the function is unknown. The reference sequence was derived from JBMGRA010000022.1. On Jun 5, 2025 this sequence version replaced NP_001038677.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8N1YZ11", "ec_number_list": [], "go_molecular_function": "GO:0004866 endopeptidase inhibitor activity;GO:0004869 cysteine-type endopeptidase inhibitor activity", "go_cellular_component": "GO:0005576 extracellular region;GO:0005615 extracellular space", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q1LUV0-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1LUW9-1", "uniprot_id": [ { "id": "Q1LUW9_DANRE", "url": "https://www.uniprot.org/uniprot/Q1LUW9", "type": "external" } ], "mass": 42512.0, "length": 368, "protein_name": "Uncharacterized protein LOC569191", "gene_name": "kcnj1a.4", "organism": "Zebrafish", "refseq_name": "uncharacterized protein LOC569191", "refseq_ac": [ { "id": "NP_001038643", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001038643", "type": "external" } ], "gene_names_uniprotkb": "kcnj1a.4; si:ch211-244h7.5", "gene_names_refseq": "kcnj1a.4; si:ch211-244h7.5", "protein_names_uniprotkb": "Uncharacterized protein LOC569191", "protein_names_refseq": "uncharacterized protein LOC569191", "tax_id": 7955, "disease": "Bartter disease type 2 (Disease Ontology:DOID:0110143); nephrotic syndrome (Disease Ontology:DOID:1184)", "pathway": " (dre:569191)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "32471067;34558132", "class_list": "", "function": "", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 2, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [ { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "1.5.1.2", "url": "https://www.rhea-db.org/rhea/?query=ec:1.5.1.2", "type": "external" } ], "go_molecular_function": "GO:0005242 inward rectifier potassium channel activity", "go_cellular_component": "GO:0005886 plasma membrane;GO:0034702 monoatomic ion channel complex", "go_biological_process": "GO:0007399 nervous system development;GO:0034765 regulation of monoatomic ion transmembrane transport;GO:1990573 potassium ion import across plasma membrane", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "Q1LUW9-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1LUX0-1", "uniprot_id": [ { "id": "Q1LUX0_DANRE", "url": "https://www.uniprot.org/uniprot/Q1LUX0", "type": "external" } ], "mass": 42727.0, "length": 368, "protein_name": "Uncharacterized protein LOC569137", "gene_name": "kcnj1a.3", "organism": "Zebrafish", "refseq_name": "uncharacterized protein LOC569137", "refseq_ac": [ { "id": "NP_001038641", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001038641", "type": "external" } ], "gene_names_uniprotkb": "kcnj1a.3; si:ch211-244h7.4", "gene_names_refseq": "kcnj1a.3; si:ch211-244h7.4", "protein_names_uniprotkb": "Uncharacterized protein LOC569137", "protein_names_refseq": "uncharacterized protein LOC569137", "tax_id": 7955, "disease": "Bartter disease type 2 (Disease Ontology:DOID:0110143); nephrotic syndrome (Disease Ontology:DOID:1184)", "pathway": " (dre:569137)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "32471067;34558132", "class_list": "", "function": "", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 2, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [ { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "1.5.1.2", "url": "https://www.rhea-db.org/rhea/?query=ec:1.5.1.2", "type": "external" } ], "go_molecular_function": "GO:0005242 inward rectifier potassium channel activity", "go_cellular_component": "GO:0005886 plasma membrane;GO:0034702 monoatomic ion channel complex", "go_biological_process": "GO:0007399 nervous system development;GO:0034765 regulation of monoatomic ion transmembrane transport;GO:1990573 potassium ion import across plasma membrane", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "Q1LUX0-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1LUX5-1", "uniprot_id": [ { "id": "Q1LUX5_DANRE", "url": "https://www.uniprot.org/uniprot/Q1LUX5", "type": "external" } ], "mass": 69301.0, "length": 636, "protein_name": "Zinc finger protein 296", "gene_name": "znf296", "organism": "Zebrafish", "refseq_name": "zinc finger protein 296", "refseq_ac": [ { "id": "NP_001037784", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001037784", "type": "external" } ], "gene_names_uniprotkb": "znf296; si:dkey-7l12.1", "gene_names_refseq": "si:dkey-7l12.1; znf296", "protein_names_uniprotkb": "Zinc finger protein 296", "protein_names_refseq": "zinc finger protein 296", "tax_id": 7955, "disease": "", "pathway": " (dre:553232)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "15520368;23684812;25556858;26469318;27189481;36077499", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GDQH01005297.1, SRR32588723.2424595.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000018.1. On Aug 25, 2006 this sequence version replaced XP_697942.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1N948", "ec_number_list": [], "go_molecular_function": "GO:0003700 DNA-binding transcription factor activity;GO:0008270 zinc ion binding;GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0045944 positive regulation of transcription by RNA polymerase II", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q1LUX5-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1LUY0-1", "uniprot_id": [ { "id": "Q1LUY0_DANRE", "url": "https://www.uniprot.org/uniprot/Q1LUY0", "type": "external" } ], "mass": 75571.0, "length": 663, "protein_name": "2.4.2.30; Protein mono-ADP-ribosyltransferase PARP12", "gene_name": "parp12a", "organism": "Zebrafish", "refseq_name": "protein mono-ADP-ribosyltransferase PARP12", "refseq_ac": [ { "id": "NP_001076321", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001076321", "type": "external" } ], "gene_names_uniprotkb": "parp12a; si:ch211-227d19.2", "gene_names_refseq": "parp12a; si:ch211-227d19.2", "protein_names_uniprotkb": "2.4.2.30; Protein mono-ADP-ribosyltransferase PARP12", "protein_names_refseq": "parp12; protein mono-ADP-ribosyltransferase PARP12", "tax_id": 7955, "disease": "", "pathway": " (dre:567195)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "15520368;24683187;25601102;26469318;27189481;33901262", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GFIL01029492.1, GDQH01012479.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505373 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000018.1. On Jul 3, 2025 this sequence version replaced NP_001076321.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NDD7", "ec_number_list": [], "go_molecular_function": "GO:1990404 NAD+-protein mono-ADP-ribosyltransferase activity;GO:0008270 zinc ion binding;GO:0003950 NAD+ poly-ADP-ribosyltransferase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm", "go_biological_process": "GO:0070213 protein auto-ADP-ribosylation", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q1LUY0-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1LUZ9-1", "uniprot_id": [ { "id": "Q1LUZ9_DANRE", "url": "https://www.uniprot.org/uniprot/Q1LUZ9", "type": "external" } ], "mass": 60297.0, "length": 549, "protein_name": "Carboxylic ester hydrolase", "gene_name": "ces3", "organism": "Zebrafish", "refseq_name": "carboxylesterase 3 precursor", "refseq_ac": [ { "id": "NP_001038401", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001038401", "type": "external" } ], "gene_names_uniprotkb": "ces3; si:dkey-38l12.3; wu:fb66e04; wu:fi21c04; wu:fj87b08", "gene_names_refseq": "ces3; si:dkey-38l12.3; wu:fb66e04; wu:fi21c04; wu:fj87b08", "protein_names_uniprotkb": "Carboxylic ester hydrolase; 3.1.1.-", "protein_names_refseq": "carboxylesterase 2; carboxylesterase 3 precursor", "tax_id": 7955, "disease": "", "pathway": " (dre:560651); (R-DRE-2022377); (R-DRE-211945); (R-DRE-5578768); (R-DRE-8964038); (R-DRE-9749641)", "pathway_count": 6, "publication_count": 8, "publication_id_list": "19200601;22297719;23744565;24683187;25139857;28252024;30968686;32602149", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC091470.1, SRR32588728.25487261.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505371, SAMEA3505372 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000018.1, EH499836.1, DY571559.1 and EH526079.1. On Aug 24, 2010 this sequence version replaced XP_001336308.2., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1N9N2", "ec_number_list": [ { "id": "3.1.1.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.1.-", "type": "external" } ], "go_molecular_function": "GO:0106435 carboxylesterase activity", "go_cellular_component": "GO:0031514 motile cilium", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "Q1LUZ9-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1LV17-1", "uniprot_id": [ { "id": "I2BP1_DANRE", "url": "https://www.uniprot.org/uniprot/Q1LV17", "type": "external" } ], "mass": 64906.0, "length": 605, "protein_name": "Interferon regulatory factor 2-binding protein 1", "gene_name": "irf2bp1", "organism": "Zebrafish", "refseq_name": "interferon regulatory factor 2-binding protein 1", "refseq_ac": [ { "id": "NP_001037819", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001037819", "type": "external" } ], "gene_names_uniprotkb": "irf2bp1; si:dkey-223n17.3", "gene_names_refseq": "irf2bp1; si:dkey-223n17.3", "protein_names_uniprotkb": "Interferon regulatory factor 2-binding protein 1; IRF-2-binding protein 1; IRF-2BP1", "protein_names_refseq": "IRF-2-binding protein 1; IRF-2BP1; interferon regulatory factor 2-binding protein 1", "tax_id": 7955, "disease": "neurodevelopmental disorder with regression, abnormal movements, loss of speech, and seizures (Disease Ontology:DOID:0081327); central nervous system disease (Disease Ontology:DOID:331)", "pathway": " (dre:556852)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "23594743;40044042", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC134860.1, EE713051.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505381 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC134860.1. On Jun 3, 2007 this sequence version replaced NP_001037819.1., [RefSeq]; Acts as a transcriptional repressor., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 1, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 1, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 1, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 1, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 0, "biomarker_type": "", "glycan_count": 1, "disease_count": 2, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A4IG01", "ec_number_list": [], "go_molecular_function": "GO:0003714 transcription corepressor activity", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006357 regulation of transcription by RNA polymerase II", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "Q1LV17-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0100000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1LV45-1", "uniprot_id": [ { "id": "Q1LV45_DANRE", "url": "https://www.uniprot.org/uniprot/Q1LV45", "type": "external" } ], "mass": 52484.0, "length": 485, "protein_name": "Solute carrier family 71 member 1", "gene_name": "slc71a1-1", "organism": "Zebrafish", "refseq_name": "MFSD14 family MFS transporter", "refseq_ac": [ { "id": "NP_998692", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_998692", "type": "external" } ], "gene_names_uniprotkb": "slc71a1-1; hiat1b; hiat1; mfsd14a1; wu:fc64d02; wu:fi04d02; wu:fi11d05; zgc:55324", "gene_names_refseq": "hiat1b; hiat1; mfsd14a1; slc71a1-1; slc71a1; wu:fc64d02; wu:fi04d02; wu:fi11d05; zgc:55324", "protein_names_uniprotkb": "Solute carrier family 71 member 1; Hippocampus abundant transcript 1 protein; Major facilitator superfamily domain-containing 14A; Putative tetracycline transporter-like protein", "protein_names_refseq": "MFSD14 family MFS transporter; hippocampus abundant transcript 1b; major facilitator superfamily domain containing 14A 1", "tax_id": 7955, "disease": "", "pathway": " (dre:406848)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "26469318;27189481;28878041;36124551", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GFIL01012505.1, GDQH01009504.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000022.1 and EH497588.1. On or before May 13, 2015 this sequence version replaced XP_005174002.1, NP_998692.1. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments., [RefSeq]; Probable membrane-bound transporter. May play a role in neuronal nutrient sensing and energy homeostasis. Required for the final stages of spermatogenesis., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1PFD4", "ec_number_list": [], "go_molecular_function": "GO:0022857 transmembrane transporter activity", "go_cellular_component": "GO:0016020 membrane", "go_biological_process": "GO:0140734 ammonium excretion", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "Q1LV45-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1LV50-1", "uniprot_id": [ { "id": "CENPP_DANRE", "url": "https://www.uniprot.org/uniprot/Q1LV50", "type": "external" } ], "mass": 32534.0, "length": 282, "protein_name": "Centromere protein P", "gene_name": "cenpp", "organism": "Zebrafish", "refseq_name": "centromere protein P", "refseq_ac": [ { "id": "NP_001003555", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001003555", "type": "external" } ], "gene_names_uniprotkb": "cenpp; fb81h12; si:ch211-103f16.3; wu:fb81h12; zgc:101125", "gene_names_refseq": "cenpp; fb81h12; si:ch211-103f16.3; wu:fb81h12; zgc:101125", "protein_names_uniprotkb": "Centromere protein P; CENP-P", "protein_names_refseq": "CENP-P; centromere protein P", "tax_id": 7955, "disease": "", "pathway": " (dre:445161); (R-DRE-141430); (R-DRE-141444); (R-DRE-2467813); (R-DRE-2500257); (R-DRE-5663220)", "pathway_count": 6, "publication_count": 1, "publication_id_list": "23594743", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC078335.1, GFIL01003696.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505393, SAMEA4476731 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000022.1. On Aug 30, 2018 this sequence version replaced NP_001003555.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]; Probable component of a centromeric complex involved in assembly of kinetochore proteins, mitotic progression and chromosome segregation., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q6DBW4", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005634 nucleus;GO:0000775 chromosome, centromeric region", "go_biological_process": "GO:0034080 CENP-A containing chromatin assembly", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q1LV50-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1LV73-1", "uniprot_id": [ { "id": "Q1LV73_DANRE", "url": "https://www.uniprot.org/uniprot/Q1LV73", "type": "external" } ], "mass": 75840.0, "length": 701, "protein_name": "Solute carrier organic anion transporter family member", "gene_name": "slco3a1a", "organism": "Zebrafish", "refseq_name": "solute carrier organic anion transporter family member 3A1", "refseq_ac": [ { "id": "NP_001038653", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001038653", "type": "external" } ], "gene_names_uniprotkb": "slco3a1a; si:ch211-196l7.1; slco3a1; wu:fa93e11", "gene_names_refseq": "si:ch211-196l7.1; slco3a1a; slco3a1; wu:fa93e11", "protein_names_uniprotkb": "Solute carrier organic anion transporter family member", "protein_names_refseq": "Oatp3a1; solute carrier organic anion transporter family member 3A1; solute carrier organic anion transporter family, member 3A1; zOatp3a2", "tax_id": 7955, "disease": "", "pathway": " (dre:569735); (R-DRE-879518)", "pathway_count": 2, "publication_count": 10, "publication_id_list": "15520368;16648940;19478994;19931635;24113777;27616648;28143724;28694436;31053140;31136897", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GFIL01038935.1, GDQH01004049.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000018.1. On Sep 1, 2006 this sequence version replaced XP_698231.1. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NAF8", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0016323 basolateral plasma membrane", "go_biological_process": "GO:0006811 monoatomic ion transport;GO:0055085 transmembrane transport;GO:0043252 sodium-independent organic anion transport;GO:0015732 prostaglandin transport", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "Q1LV73-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1LV86-1", "uniprot_id": [ { "id": "Q1LV86_DANRE", "url": "https://www.uniprot.org/uniprot/Q1LV86", "type": "external" } ], "mass": 95893.0, "length": 868, "protein_name": "Olfactory receptor CU1 precursor", "gene_name": "olfcu1", "organism": "Zebrafish", "refseq_name": "olfactory receptor CU1 precursor", "refseq_ac": [ { "id": "NP_001076368", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001076368", "type": "external" } ], "gene_names_uniprotkb": "olfcu1; si:dkey-183j10.1; v2rx1", "gene_names_refseq": "olfcu1; si:dkey-183j10.1; v2rx1", "protein_names_uniprotkb": "Olfactory receptor CU1 precursor", "protein_names_refseq": "Dr14-1; X01; olfactory receptor CU1 precursor; sub 14_1; vomeronasal 2 receptor, x1", "tax_id": 7955, "disease": "", "pathway": " (dre:794431)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "16226854;17014738;18706493;22038944;26108469;29792162;31263779", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC163066.1, SRR32588730.7998735.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505376, SAMEA3505388 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000018.1. On Mar 15, 2007 this sequence version replaced XP_001334397.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NBZ3", "ec_number_list": [], "go_molecular_function": "GO:0004930 G protein-coupled receptor activity", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q1LV86-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1LV89-1", "uniprot_id": [ { "id": "Q1LV89_DANRE", "url": "https://www.uniprot.org/uniprot/Q1LV89", "type": "external" } ], "mass": 95224.0, "length": 855, "protein_name": "Olfactory receptor CQ3 precursor", "gene_name": "olfcq3", "organism": "Zebrafish", "refseq_name": "olfactory receptor CQ3 precursor", "refseq_ac": [ { "id": "NP_001076358", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001076358", "type": "external" } ], "gene_names_uniprotkb": "olfcq3; si:dkey-183j10.3; v2rh32", "gene_names_refseq": "olfcq3; si:dkey-183j10.3; v2rh32", "protein_names_uniprotkb": "Olfactory receptor CQ3 precursor", "protein_names_refseq": "Dr16-3; H32; olfactory receptor CQ3 precursor; sub 16_4; vomeronasal 2 receptor, h32", "tax_id": 7955, "disease": "", "pathway": " (dre:793365)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "16226854;17014738;18706493;26108469;29792162;31263779;31921316", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC151857.1, SRR32588730.12091354.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505386, SAMEA3505392 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000018.1. On Mar 15, 2007 this sequence version replaced XP_001331800.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NC32", "ec_number_list": [], "go_molecular_function": "GO:0004930 G protein-coupled receptor activity", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q1LV89-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1LVA5-1", "uniprot_id": [ { "id": "Q1LVA5_DANRE", "url": "https://www.uniprot.org/uniprot/Q1LVA5", "type": "external" } ], "mass": 23260.0, "length": 210, "protein_name": "Ras-related protein Rab-25", "gene_name": "rab25a", "organism": "Zebrafish", "refseq_name": "ras-related protein Rab-25a", "refseq_ac": [ { "id": "NP_001008641", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001008641", "type": "external" } ], "gene_names_uniprotkb": "rab25a; rab25; si:dkeyp-84f11.7; zgc:101648", "gene_names_refseq": "rab25a; rab25; si:dkeyp-84f11.7; zgc:101648", "protein_names_uniprotkb": "Ras-related protein Rab-25", "protein_names_refseq": "ras-related protein Rab-25a", "tax_id": 7955, "disease": "", "pathway": " (dre:494098)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "16466575;20463035;23559552;26469318;27910850;28252024;28396820;33755014;34111665", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GDQH01029034.1, GDQQ01004198.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000019.1 and EH456340.1. On Dec 7, 2013 this sequence version replaced NP_001008641.1. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments., [RefSeq]; The recycling endosome protein Rab25 coordinates collective cell movements in the zebrafish surface epithelium. Erratum:[Elife. 2022 May 19;11:e79841. doi: 10.7554/eLife.79841. PMID: 35587652] Publication Status: Online-Only, [RefSeq, PubMed]; The small GTPases Rab are key regulators of intracellular membrane trafficking, from the formation of transport vesicles to their fusion with membranes. Rabs cycle between an inactive GDP-bound form and an active GTP-bound form that is able to recruit to membranes different set of downstream effectors directly responsible for vesicle formation, movement, tethering and fusion. RAB25 regulates epithelial cell differentiation, proliferation and survival, thereby playing key roles in tumorigenesis. Promotes invasive migration of cells in which it functions to localize and maintain integrin alpha-V/beta-1 at the tips of extending pseudopodia. Involved in the regulation of epithelial morphogenesis through the control of CLDN4 expression and localization at tight junctions. May selectively regulate the apical recycling pathway. Together with MYO5B regulates transcytosis., [UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1N3T9", "ec_number_list": [], "go_molecular_function": "GO:0003924 GTPase activity;GO:0005525 GTP binding", "go_cellular_component": "GO:0031260 pseudopodium membrane;GO:0005794 Golgi apparatus;GO:0055037 recycling endosome;GO:0012505 endomembrane system", "go_biological_process": "GO:0030866 cortical actin cytoskeleton organization;GO:0006887 exocytosis;GO:0032465 regulation of cytokinesis;GO:2001135 regulation of endocytic recycling", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "Q1LVA5-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1LVA7-1", "uniprot_id": [ { "id": "Q1LVA7_DANRE", "url": "https://www.uniprot.org/uniprot/Q1LVA7", "type": "external" } ], "mass": 18056.0, "length": 166, "protein_name": "Potassium voltage-gated channel subfamily E member 4", "gene_name": "kcne4", "organism": "Zebrafish", "refseq_name": "potassium voltage-gated channel subfamily E member 4", "refseq_ac": [ { "id": "NP_001076366", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001076366", "type": "external" } ], "gene_names_uniprotkb": "kcne4; si:dkeyp-109h9.3", "gene_names_refseq": "kcne4; si:dkeyp-109h9.3", "protein_names_uniprotkb": "Potassium voltage-gated channel subfamily E member 4", "protein_names_refseq": "potassium voltage-gated channel subfamily E member 4", "tax_id": 7955, "disease": "", "pathway": " (dre:794240)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "26469318;27805004;31199900;33424641;34751773;35088848;38598053", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GDQH01021025.1, EB895155.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505373 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000015.1. On Mar 15, 2007 this sequence version replaced XP_001332773.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NDG2", "ec_number_list": [], "go_molecular_function": "GO:0015459 potassium channel regulator activity;GO:0044325 transmembrane transporter binding;GO:0005249 voltage-gated potassium channel activity", "go_cellular_component": "GO:0008076 voltage-gated potassium channel complex", "go_biological_process": "GO:0086011 membrane repolarization during action potential;GO:0098915 membrane repolarization during ventricular cardiac muscle cell action potential;GO:0086091 regulation of heart rate by cardiac conduction;GO:0060307 regulation of ventricular cardiac muscle cell membrane repolarization;GO:0086005 ventricular cardiac muscle cell action potential", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q1LVA7-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1LVA8-1", "uniprot_id": [ { "id": "Q1LVA8_DANRE", "url": "https://www.uniprot.org/uniprot/Q1LVA8", "type": "external" } ], "mass": 79035.0, "length": 713, "protein_name": "long-chain-fatty-acid--CoA ligase", "gene_name": "acsl3a", "organism": "Zebrafish", "refseq_name": "long-chain-fatty-acid--CoA ligase 3a", "refseq_ac": [ { "id": "NP_001038593", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001038593", "type": "external" } ], "gene_names_uniprotkb": "acsl3a; si:dkeyp-109h9.2", "gene_names_refseq": "acsl3a; si:dkeyp-109h9.2", "protein_names_uniprotkb": "long-chain-fatty-acid--CoA ligase; 6.2.1.3", "protein_names_refseq": "long-chain-fatty-acid--CoA ligase 3a", "tax_id": 7955, "disease": "non-syndromic X-linked intellectual disability (Disease Ontology:DOID:0050776); non-syndromic X-linked intellectual disability 63 (Disease Ontology:DOID:0112050); prostate cancer (Disease Ontology:DOID:10283); lung cancer (Disease Ontology:DOID:1324); Sjogren-Larsson syndrome (Disease Ontology:DOID:14501); breast cancer (Disease Ontology:DOID:1612); asthma (Disease Ontology:DOID:2841)", "pathway": " (dre:567157)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "17762044;24330521;25030662;26469318;29209275;32691447;34016526;36642092", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: SRR32588734.3013263.1, SRR32588729.4014924.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505392, SAMEA4476731 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000015.1. On Sep 1, 2006 this sequence version replaced XP_695540.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 7, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8N1YYX4", "ec_number_list": [ { "id": "6.2.1.3", "url": "https://www.rhea-db.org/rhea/?query=ec:6.2.1.3", "type": "external" }, { "id": "6.2.1.15", "url": "https://www.rhea-db.org/rhea/?query=ec:6.2.1.15", "type": "external" } ], "go_molecular_function": "GO:0004467 long-chain fatty acid-CoA ligase activity", "go_cellular_component": "GO:0005783 endoplasmic reticulum;GO:0005811 lipid droplet;GO:0005886 plasma membrane", "go_biological_process": "GO:0001676 long-chain fatty acid metabolic process;GO:0030182 neuron differentiation;GO:0035336 long-chain fatty-acyl-CoA metabolic process", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "Q1LVA8-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1LVB0-1", "uniprot_id": [ { "id": "Q1LVB0_DANRE", "url": "https://www.uniprot.org/uniprot/Q1LVB0", "type": "external" } ], "mass": 135115.0, "length": 1247, "protein_name": "Sal-like protein 1", "gene_name": "sall3b", "organism": "Zebrafish", "refseq_name": "sal-like protein 3b", "refseq_ac": [ { "id": "NP_001038615", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001038615", "type": "external" } ], "gene_names_uniprotkb": "sall3b; im:7138196; sallb; si:dkey-195c14.1; wu:fb01e09", "gene_names_refseq": "im:7138196; sall3b; sallb; si:dkey-195c14.1; wu:fb01e09", "protein_names_uniprotkb": "Sal-like protein 1", "protein_names_refseq": "sal-like 3b; sal-like protein 3b; sall3l", "tax_id": 7955, "disease": "", "pathway": " (dre:568041)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "22286130;25417113;25556858;26469318;27189481;28096348;38850245", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GFIL01034403.1, GDQH01027678.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505372 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000019.1. On Sep 1, 2006 this sequence version replaced XP_696441.1., [RefSeq]; Transcriptional repressor involved in organogenesis. Plays an essential role in ureteric bud invasion during kidney development., [UniProtKB, UniProtKB]", "predicted_glycosites": 2, "predicted_n_glycosites": 0, "predicted_o_glycosites": 2, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 2, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NA30", "ec_number_list": [], "go_molecular_function": "GO:0003677 DNA binding;GO:0008270 zinc ion binding;GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific", "go_cellular_component": "GO:0005634 nucleus;GO:0005654 nucleoplasm;GO:0000792 heterochromatin", "go_biological_process": "GO:0001708 cell fate specification;GO:0035295 tube development;GO:0000122 negative regulation of transcription by RNA polymerase II;GO:0006351 DNA-templated transcription;GO:0006357 regulation of transcription by RNA polymerase II", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q1LVB0-1", "record_type": "protein", "filter_code": "0000000.0000101.010000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M6YYQ9-1", "uniprot_id": [ { "id": "A0A8M6YYQ9_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M6YYQ9", "type": "external" } ], "mass": 38244.0, "length": 331, "protein_name": "Uncharacterized protein si:dkey-30f3.2 isoform X1", "gene_name": "si:dkey-30f3.2", "organism": "Zebrafish", "refseq_name": "si:dkey-30f3.2", "refseq_ac": [ { "id": "NP_001428641", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001428641", "type": "external" } ], "gene_names_uniprotkb": "si:dkey-30f3.2", "gene_names_refseq": "si:dkey-30f3.2", "protein_names_uniprotkb": "Uncharacterized protein si:dkey-30f3.2 isoform X1", "protein_names_refseq": "gastrula zinc finger protein XlCGF57.1; si:dkey-30f3.2", "tax_id": 7955, "disease": "", "pathway": " (dre:103910879)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: SRR26395039.1561882.1, SRR26395014.551135.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA4476747 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000004.1. On Jun 30, 2025 this sequence version replaced XP_017211236.2., [RefSeq]; May be involved in transcriptional regulation., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0003677 DNA binding;GO:0008270 zinc ion binding;GO:0042802 identical protein binding;GO:0000977 RNA polymerase II transcription regulatory region sequence-specific DNA binding;GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006357 regulation of transcription by RNA polymerase II", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M6YYQ9-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q5XTN8-1", "uniprot_id": [ { "id": "CRGNA_DANRE", "url": "https://www.uniprot.org/uniprot/Q5XTN8", "type": "external" } ], "mass": 21511.0, "length": 183, "protein_name": "Gamma-crystallin N-A", "gene_name": "crygn1; crygna", "organism": "Zebrafish", "refseq_name": "gamma-crystallin N-A", "refseq_ac": [ { "id": "NP_001007785", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001007785", "type": "external" } ], "gene_names_uniprotkb": "crygn1; crygna; crygn1; crygna; zgc:114194", "gene_names_refseq": "crygn1; crygna; zgc:114194", "protein_names_uniprotkb": "Gamma-crystallin N-A; Gamma-N-crystallin-A; GammaN1-crystallin", "protein_names_refseq": "gamma-N-crystallin-A; gamma-crystallin N-A; gammaN1-crystallin", "tax_id": 7955, "disease": "", "pathway": " (dre:493629)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "15853812", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC121745.1, AY738747.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AY738747.1. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications., [RefSeq]; Crystallins are the dominant structural components of the vertebrate eye lens., [UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0005212 structural constituent of eye lens", "go_cellular_component": "", "go_biological_process": "GO:0007601 visual perception;GO:0002088 lens development in camera-type eye", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q5XTN8-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q5PNM8-1", "uniprot_id": [ { "id": "Q5PNM8_DANRE", "url": "https://www.uniprot.org/uniprot/Q5PNM8", "type": "external" } ], "mass": 53776.0, "length": 481, "protein_name": "Calcium-binding mitochondrial carrier protein SCaMC-3b", "gene_name": "slc25a23b", "organism": "Zebrafish", "refseq_name": "calcium-binding mitochondrial carrier protein SCaMC-3b", "refseq_ac": [ { "id": "NP_001038417", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001038417", "type": "external" } ], "gene_names_uniprotkb": "slc25a23b; si:dkey-204f11.59", "gene_names_refseq": "si:dkey-204f11.59; slc25a23b", "protein_names_uniprotkb": "Calcium-binding mitochondrial carrier protein SCaMC-3b", "protein_names_refseq": "calcium-binding mitochondrial carrier protein SCaMC-3b; phosphate carrier), member 23b; slc25a41; solute carrier family 25 (mitochondrial carrier", "tax_id": 7955, "disease": "", "pathway": " (dre:561087)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "26469318;27189481;28252024;30080851", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GFIL01037012.1, GDQH01005146.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505378, SAMEA3505380 [ECO:0000348] ##Evidence-Data-END## ##RefSeq-Attributes-START## gene product(s) localized to mito. :: inferred from homology ##RefSeq-Attributes-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000003.1. On Sep 1, 2006 this sequence version replaced XP_689580.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1N9P6", "ec_number_list": [], "go_molecular_function": "GO:0005509 calcium ion binding;GO:0005347 ATP transmembrane transporter activity", "go_cellular_component": "GO:0005743 mitochondrial inner membrane", "go_biological_process": "GO:0055085 transmembrane transport;GO:0015866 ADP transport;GO:0015867 ATP transport", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "Q5PNM8-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q5PR55-1", "uniprot_id": [ { "id": "RLIG1_DANRE", "url": "https://www.uniprot.org/uniprot/Q5PR55", "type": "external" } ], "mass": 36933.0, "length": 325, "protein_name": "RNA ligase 1", "gene_name": "rlig1", "organism": "Zebrafish", "refseq_name": "RNA ligase 1", "refseq_ac": [ { "id": "NP_001008606", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001008606", "type": "external" } ], "gene_names_uniprotkb": "rlig1; Rnl; zgc:103499", "gene_names_refseq": "Rnl; rlig1; zgc:103499", "protein_names_uniprotkb": "RNA ligase 1; 6.5.1.3; RNA ligase; Rnl", "protein_names_refseq": "RNA ligase 1; RNA ligase; uncharacterized protein C12orf29 homolog", "tax_id": 7955, "disease": "", "pathway": " (dre:494063)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC086822.1, BC152148.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC086822.1., [RefSeq]; Functions as an RNA ligase, in vitro. The ligation reaction entails three nucleotidyl transfer steps. In the first step, the RNA ligase reacts with ATP in the absence of nucleic acid to form a covalent ligase-AMP intermediate and release pyrophosphate. In step 2, the ligase-AMP binds to the nucleic acid and transfers the adenylate to the 5'-PO4 terminus to form an adenylylated intermediate. In step 3, the RNA ligase directs the attack of the 3'-OH on the 5'-phosphoanhydride linkage, resulting in a repaired 3'-5' phosphodiester and release of AMP. Exhibits selectivity for single-stranded RNA substrates and may not have nick-sealing activity on double-stranded DNA-RNA hybrids. May play a role in maintaining RNA integrity under stress conditions, for example in response to reactive oxygen species (ROS)., [UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0005524 ATP binding;GO:0003972 RNA ligase (ATP) activity;GO:0016874 ligase activity", "go_cellular_component": "", "go_biological_process": "GO:0000302 response to reactive oxygen species;GO:0042245 RNA repair", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q5PR55-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1LWI2-1", "uniprot_id": [ { "id": "Q1LWI2_DANRE", "url": "https://www.uniprot.org/uniprot/Q1LWI2", "type": "external" } ], "mass": 65852.0, "length": 591, "protein_name": "glutaminase", "gene_name": "glsa", "organism": "Zebrafish", "refseq_name": "glutaminase a", "refseq_ac": [ { "id": "NP_001038509", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001038509", "type": "external" } ], "gene_names_uniprotkb": "glsa; glsl", "gene_names_refseq": "glsa; glsl", "protein_names_uniprotkb": "glutaminase; 3.5.1.2", "protein_names_refseq": "glutaminase a; glutaminase, like", "tax_id": 7955, "disease": "CASGID syndrome (Disease Ontology:DOID:0061156); developmental and epileptic encephalopathy 71 (Disease Ontology:DOID:0112207); lymphangioleiomyomatosis (Disease Ontology:DOID:3319)", "pathway": " (dre:564147); (R-DRE-210500); (R-DRE-5628897); (R-DRE-8964539)", "pathway_count": 4, "publication_count": 10, "publication_id_list": "15520368;19146232;21947502;22412924;25999794;33092822;33296199;34925021;35318061;37290634", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: SRR32588723.1414452.1, SRR32588727.3044516.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## ##RefSeq-Attributes-START## gene product(s) localized to mito. :: inferred from homology ##RefSeq-Attributes-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000022.1. On or before Sep 1, 2006 this sequence version replaced XP_708505.1, XP_708506.1, XP_708507.1, XP_708508.1, XP_686725.1. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 3, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NA58", "ec_number_list": [ { "id": "6.3.4.16", "url": "https://www.rhea-db.org/rhea/?query=ec:6.3.4.16", "type": "external" }, { "id": "2.1.3.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.1.3.2", "type": "external" }, { "id": "3.5.2.3", "url": "https://www.rhea-db.org/rhea/?query=ec:3.5.2.3", "type": "external" }, { "id": "6.3.5.5", "url": "https://www.rhea-db.org/rhea/?query=ec:6.3.5.5", "type": "external" }, { "id": "3.5.1.2", "url": "https://www.rhea-db.org/rhea/?query=ec:3.5.1.2", "type": "external" } ], "go_molecular_function": "GO:0004359 glutaminase activity", "go_cellular_component": "GO:0005739 mitochondrion", "go_biological_process": "GO:0006541 glutamine metabolic process;GO:0006537 glutamate biosynthetic process;GO:0006543 L-glutamine catabolic process", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "Q1LWI2-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1LVM1-1", "uniprot_id": [ { "id": "Q1LVM1_DANRE", "url": "https://www.uniprot.org/uniprot/Q1LVM1", "type": "external" } ], "mass": 75148.0, "length": 666, "protein_name": "3.1.4.2; Glycerophosphocholine phosphodiesterase GPCPD1", "gene_name": "gpcpd1", "organism": "Zebrafish", "refseq_name": "glycerophosphocholine phosphodiesterase GPCPD1", "refseq_ac": [ { "id": "NP_001103993", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001103993", "type": "external" } ], "gene_names_uniprotkb": "gpcpd1; si:rp71-81o21.1; zgc:103717", "gene_names_refseq": "gpcpd1; si:rp71-81o21.1; zgc:103717", "protein_names_uniprotkb": "3.1.4.2; Glycerophosphocholine phosphodiesterase GPCPD1", "protein_names_refseq": "glycerophosphocholine phosphodiesterase GDE1 homolog; glycerophosphocholine phosphodiesterase GPCPD1", "tax_id": 7955, "disease": "", "pathway": " (dre:492483)", "pathway_count": 1, "publication_count": 3, "publication_id_list": "23725763;26469318;27189481", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: SRR32588722.32476828.1, GDQQ01001772.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000020.1. On Jun 7, 2025 this sequence version replaced NP_001103993.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NFB1;F6NSA7", "ec_number_list": [], "go_molecular_function": "GO:0008081 phosphoric diester hydrolase activity;GO:2001070 starch binding;GO:0047389 glycerophosphocholine phosphodiesterase activity", "go_cellular_component": "", "go_biological_process": "GO:0006629 lipid metabolic process;GO:0046475 glycerophospholipid catabolic process", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "Q1LVM1-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q5SNQ7-1", "uniprot_id": [ { "id": "SRAC1_DANRE", "url": "https://www.uniprot.org/uniprot/Q5SNQ7", "type": "external" } ], "mass": 74438.0, "length": 658, "protein_name": "Protein SERAC1", "gene_name": "serac1", "organism": "Zebrafish", "refseq_name": "protein SERAC1 isoform X1", "refseq_ac": [ { "id": "XP_005160640", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005160640", "type": "external" } ], "gene_names_uniprotkb": "serac1", "gene_names_refseq": "serac1", "protein_names_uniprotkb": "Protein SERAC1; Serine active site-containing protein 1", "protein_names_refseq": "protein SERAC1 isoform X1", "tax_id": 7955, "disease": "3-methylglutaconic aciduria with deafness, encephalopathy, and Leigh-like syndrome (Disease Ontology:DOID:0110001)", "pathway": " (dre:568022)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "23594743;28252024", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133195) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]; Plays an important role in the phosphatidylglycerol remodeling that is essential for both mitochondrial function and intracellular cholesterol trafficking. May catalyze the remodeling of phosphatidylglycerol and be involved in the transacylation-acylation reaction to produce phosphatidylglycerol-36:1. May be involved in bis(monoacylglycerol)phosphate biosynthetic pathway (By similarity)., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q5SNQ8", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005739 mitochondrion;GO:0005783 endoplasmic reticulum;GO:0016020 membrane", "go_biological_process": "GO:0008654 phospholipid biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "Q5SNQ7-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q5XJB9-1", "uniprot_id": [ { "id": "ARHL1_DANRE", "url": "https://www.uniprot.org/uniprot/Q5XJB9", "type": "external" } ], "mass": 39201.0, "length": 350, "protein_name": "Inactive ADP-ribosyltransferase arh2", "gene_name": "adprhl1", "organism": "Zebrafish", "refseq_name": "inactive ADP-ribosyltransferase arh2", "refseq_ac": [ { "id": "NP_001006033", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001006033", "type": "external" } ], "gene_names_uniprotkb": "adprhl1; arh2; zgc:103446", "gene_names_refseq": "adprhl1; zgc:103446", "protein_names_uniprotkb": "Inactive ADP-ribosyltransferase arh2; ADP-ribosylhydrolase-like protein 1; [Protein ADP-ribosylarginine] hydrolase-like protein 1", "protein_names_refseq": "ADP-ribosylhydrolase 2; ADP-ribosylhydrolase-like protein 1; [Protein ADP-ribosylarginine] hydrolase-like protein 1; inactive ADP-ribosyltransferase arh2", "tax_id": 7955, "disease": "", "pathway": " (dre:450012)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: SRR32588714.45046171.1, SRR32588723.1224932.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505377 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000001.1. On or before Apr 20, 2018 this sequence version replaced XP_021328756.1, XP_693259.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]; Required for myofibril assembly and outgrowth of the cardiac chambers in the developing heart (By similarity). Appears to be catalytically inactive, showing no activity against O-acetyl-ADP-ribose (By similarity)., [UniProtKB, UniProtKB, UniProtKB]; Required for myofibril assembly and outgrowth of the cardiac chambers in the developing heart. Appears to be catalytically inactive, showing no activity against O-acetyl-ADP-ribose., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0000287 magnesium ion binding;GO:0003875 ADP-ribosylarginine hydrolase activity;GO:0046872 metal ion binding", "go_cellular_component": "GO:0030017 sarcomere", "go_biological_process": "GO:0055003 cardiac myofibril assembly;GO:0051725 protein de-ADP-ribosylation;GO:0003242 cardiac chamber ballooning", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q5XJB9-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q32PT6-1", "uniprot_id": [ { "id": "Q32PT6_DANRE", "url": "https://www.uniprot.org/uniprot/Q32PT6", "type": "external" } ], "mass": 35300.0, "length": 312, "protein_name": "Odorant receptor 115-12", "gene_name": "or70a3", "organism": "Zebrafish", "refseq_name": "odorant receptor 115-12", "refseq_ac": [ { "id": "NP_001032482", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001032482", "type": "external" } ], "gene_names_uniprotkb": "or70a3; or115-12; or21.39; wu:fj32f10; zgc:123337", "gene_names_refseq": "or115-12; or21.39; or70a3; wu:fj32f10; zgc:123337", "protein_names_uniprotkb": "Odorant receptor 115-12", "protein_names_refseq": "odorant receptor 115-12; odorant receptor, family F, subfamily 115, member 12; olfactory receptor Olr441", "tax_id": 7955, "disease": "", "pathway": " (dre:641416)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "16332259;20333175;26108469;26469318;32295537", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC107987.1, CN018705.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505376, SAMEA3505380 [ECO:0000348] ##Evidence-Data-END## ##RefSeq-Attributes-START## CDS uses downstream in-frame AUG :: upstream AUG and CDS extension is not conserved ##RefSeq-Attributes-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000021.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "F6NL03;Q2PRI4", "ec_number_list": [], "go_molecular_function": "GO:0004930 G protein-coupled receptor activity;GO:0004984 olfactory receptor activity;GO:0005549 odorant binding", "go_cellular_component": "GO:0005886 plasma membrane;GO:0016020 membrane", "go_biological_process": "GO:0050911 detection of chemical stimulus involved in sensory perception of smell", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q32PT6-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M6Z277-1", "uniprot_id": [ { "id": "A0A8M6Z277_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M6Z277", "type": "external" } ], "mass": 34100.0, "length": 302, "protein_name": "NADP-retinol dehydrogenase", "gene_name": "si:dkey-94e7.2", "organism": "Zebrafish", "refseq_name": "uncharacterized protein isoform X1", "refseq_ac": [ { "id": "XP_017212892", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_017212892", "type": "external" } ], "gene_names_uniprotkb": "si:dkey-94e7.2", "gene_names_refseq": "si:dkey-94e7.2", "protein_names_uniprotkb": "NADP-retinol dehydrogenase; 1.1.1.300", "protein_names_refseq": "uncharacterized protein isoform X1", "tax_id": 7955, "disease": "Leber congenital amaurosis (Disease Ontology:DOID:14791)", "pathway": " (dre:100141353)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "26469318", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133177) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [ { "id": "1.1.1.300", "url": "https://www.rhea-db.org/rhea/?query=ec:1.1.1.300", "type": "external" } ], "go_molecular_function": "GO:0052650 all-trans-retinol dehydrogenase (NADP+) activity;GO:0016491 oxidoreductase activity", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "A0A8M6Z277-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M6YZX5-1", "uniprot_id": [ { "id": "A0A8M6YZX5_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M6YZX5", "type": "external" } ], "mass": 140670.0, "length": 1256, "protein_name": "Disabled homolog 2-interacting protein isoform X1", "gene_name": "dab2ipa", "organism": "Zebrafish", "refseq_name": "disabled homolog 2-interacting protein isoform X1", "refseq_ac": [ { "id": "XP_017212908", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_017212908", "type": "external" } ], "gene_names_uniprotkb": "dab2ipa", "gene_names_refseq": "dab2ipa", "protein_names_uniprotkb": "Disabled homolog 2-interacting protein isoform X1", "protein_names_refseq": "disabled homolog 2-interacting protein isoform X1", "tax_id": 7955, "disease": "peripheral artery disease (Disease Ontology:DOID:0050830); developmental disorder of mental health (Disease Ontology:DOID:0060037); prostate cancer (Disease Ontology:DOID:10283); stomach cancer (Disease Ontology:DOID:10534); pre-eclampsia (Disease Ontology:DOID:10591); lung cancer (Disease Ontology:DOID:1324); atherosclerosis (Disease Ontology:DOID:1936); coronary artery disease (Disease Ontology:DOID:3393); esophagus squamous cell carcinoma (Disease Ontology:DOID:3748); lung non-small cell carcinoma (Disease Ontology:DOID:3908); myocardial infarction (Disease Ontology:DOID:5844); hepatocellular carcinoma (Disease Ontology:DOID:684); abdominal aortic aneurysm (Disease Ontology:DOID:7693); colorectal cancer (Disease Ontology:DOID:9256); nasopharynx carcinoma (Disease Ontology:DOID:9261); pulmonary embolism (Disease Ontology:DOID:9477)", "pathway": " (dre:100002454)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133183) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 2, "predicted_n_glycosites": 0, "predicted_o_glycosites": 2, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 16, "glyco_site_count": 2, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0005096 GTPase activator activity", "go_cellular_component": "", "go_biological_process": "GO:1902531 regulation of intracellular signal transduction", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M6YZX5-1", "record_type": "protein", "filter_code": "0000000.0000011.010000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M6Z133-1", "uniprot_id": [ { "id": "A0A8M6Z133_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M6Z133", "type": "external" } ], "mass": 97604.0, "length": 860, "protein_name": "Kazrin, periplakin interacting protein b isoform X1", "gene_name": "kaznb", "organism": "Zebrafish", "refseq_name": "kazrin, periplakin interacting protein b isoform X1", "refseq_ac": [ { "id": "XP_017213738", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_017213738", "type": "external" } ], "gene_names_uniprotkb": "kaznb; fa97c12; kazn; si:dkey-17e11.1; wu:fa97c12; zgc:158299", "gene_names_refseq": "fa97c12; kaznb; kazn; si:dkey-17e11.1; wu:fa97c12; zgc:158299", "protein_names_uniprotkb": "Kazrin, periplakin interacting protein b isoform X1", "protein_names_refseq": "kazrin, periplakin interacting protein b isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:790937)", "pathway_count": 1, "publication_count": 3, "publication_id_list": "26469318;27189481;28252024", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133186) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "A0A8M6Z133-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M6Z1Q1-1", "uniprot_id": [ { "id": "A0A8M6Z1Q1_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M6Z1Q1", "type": "external" } ], "mass": 77370.0, "length": 692, "protein_name": "Uncharacterized protein rbm33b isoform X1", "gene_name": "rbm33b", "organism": "Zebrafish", "refseq_name": "uncharacterized protein rbm33b isoform X1", "refseq_ac": [ { "id": "XP_017207279", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_017207279", "type": "external" } ], "gene_names_uniprotkb": "rbm33b", "gene_names_refseq": "rbm33b", "protein_names_uniprotkb": "Uncharacterized protein rbm33b isoform X1", "protein_names_refseq": "uncharacterized protein rbm33b isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:556301)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133177) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0003723 RNA binding", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M6Z1Q1-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M6Z228-1", "uniprot_id": [ { "id": "A0A8M6Z228_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M6Z228", "type": "external" } ], "mass": 125541.0, "length": 1096, "protein_name": "SLIT-ROBO Rho GTPase-activating protein 1", "gene_name": "srgap1a", "organism": "Zebrafish", "refseq_name": "SLIT-ROBO Rho GTPase-activating protein 1 isoform X1", "refseq_ac": [ { "id": "XP_017207519", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_017207519", "type": "external" } ], "gene_names_uniprotkb": "srgap1a", "gene_names_refseq": "srgap1a", "protein_names_uniprotkb": "SLIT-ROBO Rho GTPase-activating protein 1; Rho GTPase-activating protein 13", "protein_names_refseq": "SLIT-ROBO Rho GTPase-activating protein 1 isoform X1", "tax_id": 7955, "disease": "focal segmental glomerulosclerosis (Disease Ontology:DOID:1312); papillary thyroid carcinoma (Disease Ontology:DOID:3969)", "pathway": " (dre:570262)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133193) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]; GTPase-activating protein for RhoA and Cdc42 small GTPases. Together with CDC42 seems to be involved in the pathway mediating the repulsive signaling of Robo and Slit proteins in neuronal migration. 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This record is derived from a genomic sequence (NC_133182) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005886 plasma membrane;GO:0030054 cell junction", "go_biological_process": "GO:0035332 positive regulation of hippo signaling", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M6YZD9-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M6YZK7-1", "uniprot_id": [ { "id": "A0A8M6YZK7_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M6YZK7", "type": "external" } ], "mass": 67506.0, "length": 572, "protein_name": "Inhibitor of nuclear factor kappa-B kinase-interacting protein isoform X1", "gene_name": "ikbip", "organism": "Zebrafish", "refseq_name": "inhibitor of nuclear factor kappa-B kinase-interacting protein isoform X1", "refseq_ac": [ { "id": "XP_021330804", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021330804", "type": "external" } ], "gene_names_uniprotkb": "ikbip; si:zfos-1578f7.1; zgc:113921; zgc:85944", "gene_names_refseq": "ikbip; si:zfos-1578f7.1; zgc:113921; zgc:85944", "protein_names_uniprotkb": "Inhibitor of nuclear factor kappa-B kinase-interacting protein isoform X1", "protein_names_refseq": "inhibitor of nuclear factor kappa-B kinase-interacting protein isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:571696); (R-DRE-9758274)", "pathway_count": 2, "publication_count": 2, "publication_id_list": "26469318;27189481", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133179) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "F1QW73", "ec_number_list": [], "go_molecular_function": "GO:0016301 kinase activity", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "A0A8M6YZK7-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M6Z1D4-1", "uniprot_id": [ { "id": "A0A8M6Z1D4_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M6Z1D4", "type": "external" } ], "mass": 50484.0, "length": 466, "protein_name": "Uncharacterized protein isoform X1", "gene_name": "LOC101886004", "organism": "Zebrafish", "refseq_name": "uncharacterized protein isoform X1", "refseq_ac": [ { "id": "XP_017207036", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_017207036", "type": "external" } ], "gene_names_uniprotkb": "LOC101886004", "gene_names_refseq": "LOC101886004", "protein_names_uniprotkb": "Uncharacterized protein isoform X1", "protein_names_refseq": "uncharacterized protein isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:101886004)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133191) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M6Z1D4-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M6Z2E1-1", "uniprot_id": [ { "id": "A0A8M6Z2E1_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M6Z2E1", "type": "external" } ], "mass": 71928.0, "length": 651, "protein_name": "Cartilage acidic protein 1 isoform X1", "gene_name": "crtac1b", "organism": "Zebrafish", "refseq_name": "cartilage acidic protein 1 isoform X1", "refseq_ac": [ { "id": "XP_017214337", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_017214337", "type": "external" } ], "gene_names_uniprotkb": "crtac1b", "gene_names_refseq": "crtac1b", "protein_names_uniprotkb": "Cartilage acidic protein 1 isoform X1", "protein_names_refseq": "cartilage acidic protein 1 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:565516)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133188) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0005509 calcium ion binding", "go_cellular_component": "", "go_biological_process": "GO:0007413 axonal fasciculation", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M6Z2E1-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M6YZ16-1", "uniprot_id": [ { "id": "A0A8M6YZ16_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M6YZ16", "type": "external" } ], "mass": 71330.0, "length": 643, "protein_name": "Thrombospondin type-1 domain-containing protein 4 isoform X2", "gene_name": "adamtsl7", "organism": "Zebrafish", "refseq_name": "thrombospondin type-1 domain-containing protein 4 isoform X2", "refseq_ac": [ { "id": "XP_017211532", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_017211532", "type": "external" } ], "gene_names_uniprotkb": "adamtsl7", "gene_names_refseq": "adamtsl7", "protein_names_uniprotkb": "Thrombospondin type-1 domain-containing protein 4 isoform X2", "protein_names_refseq": "thrombospondin type-1 domain-containing protein 4 isoform X2", "tax_id": 7955, "disease": "thoracic aortic aneurysm (Disease Ontology:DOID:14004); asthma (Disease Ontology:DOID:2841)", "pathway": " (dre:556634)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133176) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_017211532.2. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 2, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0AC58JKG4", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005576 extracellular region", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M6YZ16-1", "record_type": "protein", "filter_code": "0000000.0000011.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M6Z084-1", "uniprot_id": [ { "id": "A0A8M6Z084_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M6Z084", "type": "external" } ], "mass": 84904.0, "length": 791, "protein_name": "Protein MTSS 2 isoform X1", "gene_name": "mtss1lb", "organism": "Zebrafish", "refseq_name": "protein MTSS 2 isoform X1", "refseq_ac": [ { "id": "XP_017212571", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_017212571", "type": "external" } ], "gene_names_uniprotkb": "mtss1lb", "gene_names_refseq": "mtss1lb", "protein_names_uniprotkb": "Protein MTSS 2 isoform X1", "protein_names_refseq": "protein MTSS 2 isoform X1", "tax_id": 7955, "disease": "intellectual developmental disorder with ocular anomalies and distinctive facial features (Disease Ontology:DOID:0081301)", "pathway": " (dre:564555)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133182) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0003779 actin binding", "go_cellular_component": "GO:0005737 cytoplasm", "go_biological_process": "GO:0007009 plasma membrane organization", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M6Z084-1", "record_type": "protein", "filter_code": "0000000.0000011.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M6Z0Z6-1", "uniprot_id": [ { "id": "A0A8M6Z0Z6_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M6Z0Z6", "type": "external" } ], "mass": 61569.0, "length": 545, "protein_name": "Uncharacterized protein isoform X1", "gene_name": "LOC100148951", "organism": "Zebrafish", "refseq_name": "uncharacterized protein isoform X1", "refseq_ac": [ { "id": "XP_017211899", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_017211899", "type": "external" } ], "gene_names_uniprotkb": "LOC100148951", "gene_names_refseq": "LOC100148951", "protein_names_uniprotkb": "Uncharacterized protein isoform X1", "protein_names_refseq": "uncharacterized protein isoform X1", "tax_id": 7955, "disease": "", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133180) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_017211899.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0AC58JM01;A0AC58JM11", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M6Z0Z6-1", "record_type": "protein", "filter_code": "0000000.0000000.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M6Z193-1", "uniprot_id": [ { "id": "A0A8M6Z193_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M6Z193", "type": "external" } ], "mass": 83951.0, "length": 751, "protein_name": "Histone deacetylase 4 isoform X1", "gene_name": "hdac7b", "organism": "Zebrafish", "refseq_name": "histone deacetylase 4 isoform X1", "refseq_ac": [ { "id": "XP_017212138", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_017212138", "type": "external" } ], "gene_names_uniprotkb": "hdac7b", "gene_names_refseq": "hdac7b", "protein_names_uniprotkb": "Histone deacetylase 4 isoform X1", "protein_names_refseq": "histone deacetylase 4 isoform X1", "tax_id": 7955, "disease": "colorectal cancer (Disease Ontology:DOID:9256); alopecia areata (Disease Ontology:DOID:986)", "pathway": " (dre:792596)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133181) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 2, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0AC58JVC4;A0AC58JVD0;E7FAL6", "ec_number_list": [], "go_molecular_function": "GO:0004407 histone deacetylase activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0000118 histone deacetylase complex", "go_biological_process": "GO:0040029 epigenetic regulation of gene expression", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M6Z193-1", "record_type": "protein", "filter_code": "0000000.0000011.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q5TYP7-1", "uniprot_id": [ { "id": "Q5TYP7_DANRE", "url": "https://www.uniprot.org/uniprot/Q5TYP7", "type": "external" } ], "mass": 60793.0, "length": 535, "protein_name": "EH domain-containing protein 3", "gene_name": "ehd3", "organism": "Zebrafish", "refseq_name": "EH domain-containing protein 3", "refseq_ac": [ { "id": "NP_001038469", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001038469", "type": "external" } ], "gene_names_uniprotkb": "ehd3; si:ch211-147c1.2", "gene_names_refseq": "ehd3; si:ch211-147c1.2", "protein_names_uniprotkb": "EH domain-containing protein 3", "protein_names_refseq": "EH domain-containing protein 3", "tax_id": 7955, "disease": "", "pathway": " (dre:562949)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "22139419;25686250;26469318;28252024;35149593;39081296", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GFIL01009412.1, GDQH01008210.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA4476730, SAMEA4476731 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000020.1. On Sep 1, 2006 this sequence version replaced XP_691407.1., [RefSeq]; Early steps in primary cilium assembly require EHD1/EHD3-dependent ciliary vesicle formation. Erratum:[Nat Cell Biol. 2015 Apr;17(4):531. doi: 10.1038/ncb3155. PMID: 25812525], [RefSeq, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8N7UY98", "ec_number_list": [], "go_molecular_function": "GO:0005524 ATP binding;GO:0005525 GTP binding;GO:0005509 calcium ion binding;GO:0030674 protein-macromolecule adaptor activity", "go_cellular_component": "GO:0005886 plasma membrane;GO:0010008 endosome membrane;GO:0005737 cytoplasm;GO:0005769 early endosome;GO:0048471 perinuclear region of cytoplasm", "go_biological_process": "GO:0006897 endocytosis;GO:0072659 protein localization to plasma membrane;GO:0060271 cilium assembly;GO:0032456 endocytic recycling", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q5TYP7-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M6YZT4-1", "uniprot_id": [ { "id": "A0A8M6YZT4_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M6YZT4", "type": "external" } ], "mass": 41127.0, "length": 358, "protein_name": "Uncharacterized protein isoform X1", "gene_name": "LOC103908679", "organism": "Zebrafish", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "LOC103908679", "gene_names_refseq": "", "protein_names_uniprotkb": "Uncharacterized protein isoform X1", "protein_names_refseq": "", "tax_id": 7955, "disease": "", "pathway": " (dre:103908679)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0AC58JBP0;A0AC58JBP3", "ec_number_list": [], "go_molecular_function": "GO:0008270 zinc ion binding;GO:0042802 identical protein binding;GO:0000977 RNA polymerase II transcription regulatory region sequence-specific DNA binding;GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006357 regulation of transcription by RNA polymerase II", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M6YZT4-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q5XJK1-1", "uniprot_id": [ { "id": "SCOCB_DANRE", "url": "https://www.uniprot.org/uniprot/Q5XJK1", "type": "external" } ], "mass": 8684.0, "length": 76, "protein_name": "Short coiled-coil protein B", "gene_name": "scocb", "organism": "Zebrafish", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "scocb; fc06h10; wu:fc06h10; wu:fd08f04; zgc:101848", "gene_names_refseq": "", "protein_names_uniprotkb": "Short coiled-coil protein B", "protein_names_refseq": "", "tax_id": 7955, "disease": "", "pathway": " (dre:791709); (R-DRE-6811440)", "pathway_count": 2, "publication_count": 2, "publication_id_list": "10548740;26469318", "class_list": "", "function": "Positive regulator of amino acid starvation-induced autophagy., [UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0000139 Golgi membrane;GO:0005829 cytosol", "go_biological_process": "GO:0016239 positive regulation of macroautophagy;GO:0061635 regulation of protein complex stability", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "Q5XJK1-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q503X2-1", "uniprot_id": [ { "id": "RM04_DANRE", "url": "https://www.uniprot.org/uniprot/Q503X2", "type": "external" } ], "mass": 33920.0, "length": 302, "protein_name": "Large ribosomal subunit protein uL4m", "gene_name": "mrpl4", "organism": "Zebrafish", "refseq_name": "large ribosomal subunit protein uL4m", "refseq_ac": [ { "id": "NP_001018572", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001018572", "type": "external" } ], "gene_names_uniprotkb": "mrpl4; si:dkey-23f9.3; zgc:110034; zgmrpl4", "gene_names_refseq": "mrpl4; si:dkey-23f9.3; zgc:110034; zgmrpl4", "protein_names_uniprotkb": "Large ribosomal subunit protein uL4m; 39S ribosomal protein L4, mitochondrial; L4mt; MRP-L4", "protein_names_refseq": "39S ribosomal protein L4, mitochondrial; L4mt; MRP-L4; large ribosomal subunit protein uL4m", "tax_id": 7955, "disease": "", "pathway": " (dre:553771); (R-DRE-5389840); (R-DRE-5419276); (R-DRE-9937383)", "pathway_count": 4, "publication_count": 1, "publication_id_list": "37009823", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC095145.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505371, SAMEA3505373 [ECO:0006172] ##Evidence-Data-END## ##RefSeq-Attributes-START## gene product(s) localized to mito. :: inferred from homology ##RefSeq-Attributes-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC095145.1., [RefSeq]; The mitochondrial ribosomal protein mRpL4 regulates Notch signaling., [RefSeq, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0003735 structural constituent of ribosome", "go_cellular_component": "GO:0005762 mitochondrial large ribosomal subunit;GO:0005743 mitochondrial inner membrane;GO:0005840 ribosome;GO:1990904 ribonucleoprotein complex", "go_biological_process": "GO:0006412 translation", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q503X2-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q5RH33-1", "uniprot_id": [ { "id": "Q5RH33_DANRE", "url": "https://www.uniprot.org/uniprot/Q5RH33", "type": "external" } ], "mass": 147439.0, "length": 1315, "protein_name": "FYVE, RhoGEF and PH domain-containing protein 6", "gene_name": "fgd6", "organism": "Zebrafish", "refseq_name": "FYVE, RhoGEF and PH domain-containing protein 6", "refseq_ac": [ { "id": "NP_001093450", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001093450", "type": "external" } ], "gene_names_uniprotkb": "fgd6; si:dkey-183c16.1", "gene_names_refseq": "fgd6; si:dkey-183c16.1", "protein_names_uniprotkb": "FYVE, RhoGEF and PH domain-containing protein 6", "protein_names_refseq": "FYVE, RhoGEF and PH domain-containing protein 6", "tax_id": 7955, "disease": "", "pathway": " (dre:556459)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "26469318", "class_list": "", "function": "##Evidence-Data-START## RNAseq introns :: partial sample support SAMEA3505370, SAMEA3505371 [ECO:0000350] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000004.1. On Jul 26, 2007 this sequence version replaced XP_684366.2., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NF60", "ec_number_list": [], "go_molecular_function": "GO:0008270 zinc ion binding;GO:0005085 guanyl-nucleotide exchange factor activity", "go_cellular_component": "GO:0005856 cytoskeleton;GO:0005737 cytoplasm", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q5RH33-1", "record_type": "protein", "filter_code": "0000000.0000101.010000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q5TYS4-1", "uniprot_id": [ { "id": "Q5TYS4_DANRE", "url": "https://www.uniprot.org/uniprot/Q5TYS4", "type": "external" } ], "mass": 194552.0, "length": 1794, "protein_name": "Signal-induced proliferation-associated 1-like protein 1", "gene_name": "sipa1l1", "organism": "Zebrafish", "refseq_name": "signal-induced proliferation-associated 1-like protein 1", "refseq_ac": [ { "id": "NP_001268721", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001268721", "type": "external" } ], "gene_names_uniprotkb": "sipa1l1; cb600; id:ibd5092; sb:cb600; si:ch211-106p8.1; wu:fc43g06", "gene_names_refseq": "cb600; id:ibd5092; sb:cb600; si:ch211-106p8.1; sipa1l1; wu:fc43g06", "protein_names_uniprotkb": "Signal-induced proliferation-associated 1-like protein 1", "protein_names_refseq": "signal-induced proliferation-associated 1-like protein 1", "tax_id": 7955, "disease": "", "pathway": " (dre:562521)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "26301497;26469318;27189481;28252024;30929901;34329618", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: SRR32588727.1726226.1, SRR32588735.3231448.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000020.1. On Aug 31, 2013 this sequence version replaced XP_005160793.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1P0Q5;F1QU50", "ec_number_list": [], "go_molecular_function": "GO:0005096 GTPase activator activity", "go_cellular_component": "", "go_biological_process": "GO:0051056 regulation of small GTPase mediated signal transduction;GO:0048167 regulation of synaptic plasticity;GO:0030036 actin cytoskeleton organization;GO:0061001 regulation of dendritic spine morphogenesis", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q5TYS4-1", "record_type": "protein", "filter_code": "0000000.0000101.010000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q5XJ56-1", "uniprot_id": [ { "id": "DTWD1_DANRE", "url": "https://www.uniprot.org/uniprot/Q5XJ56", "type": "external" } ], "mass": 28429.0, "length": 251, "protein_name": "tRNA-uridine aminocarboxypropyltransferase 1", "gene_name": "dtwd1", "organism": "Zebrafish", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "dtwd1; wu:fb34c05; zgc:103637; zgc:10363", "gene_names_refseq": "", "protein_names_uniprotkb": "tRNA-uridine aminocarboxypropyltransferase 1; 2.5.1.25; DTW domain-containing protein 1", "protein_names_refseq": "", "tax_id": 7955, "disease": "", "pathway": " (dre:449778)", "pathway_count": 1, "publication_count": 3, "publication_id_list": "16109975;20039754;28557307", "class_list": "", "function": "Catalyzes the formation of 3-(3-amino-3-carboxypropyl)uridine (acp3U) at position 20 in the D-loop of several cytoplasmic tRNAs (acp3U(20))., [UniProtKB, UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [ { "id": "2.5.1.25", "url": "https://www.rhea-db.org/rhea/?query=ec:2.5.1.25", "type": "external" } ], "go_molecular_function": "GO:0016432 tRNA-uridine aminocarboxypropyltransferase activity", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006400 tRNA modification;GO:0008033 tRNA processing", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "Q5XJ56-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q567G6-1", "uniprot_id": [ { "id": "RMP64_DANRE", "url": "https://www.uniprot.org/uniprot/Q567G6", "type": "external" } ], "mass": 60073.0, "length": 525, "protein_name": "Nucleolus and neural progenitor protein", "gene_name": "rmp64", "organism": "Zebrafish", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "rmp64; fi11c01; nepro; si:dkey-22a1.3; wu:fi11c01; zgc:112065", "gene_names_refseq": "", "protein_names_uniprotkb": "Nucleolus and neural progenitor protein", "protein_names_refseq": "", "tax_id": 7955, "disease": "anauxetic dysplasia 3 (Disease Ontology:DOID:0080963)", "pathway": " (dre:550343)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "23594743;27189481", "class_list": "", "function": "Specific component of the MRP ribonucleoprotein endoribonuclease, Rnase/Mrp complex, a ribonucleoprotein complex involved in pre-rRNA processing (By similarity). May play a role in the Notch signaling pathway (By similarity)., [UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q5RI41", "ec_number_list": [], "go_molecular_function": "GO:0003723 RNA binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005730 nucleolus;GO:0000172 ribonuclease MRP complex", "go_biological_process": "GO:0006396 RNA processing;GO:0045665 negative regulation of neuron differentiation;GO:0045747 positive regulation of Notch signaling pathway;GO:0006364 rRNA processing", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "Q567G6-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q66HY8-1", "uniprot_id": [ { "id": "PDXD1_DANRE", "url": "https://www.uniprot.org/uniprot/Q66HY8", "type": "external" } ], "mass": 83141.0, "length": 751, "protein_name": "Pyridoxal-dependent decarboxylase domain-containing protein 1", "gene_name": "pdxdc1", "organism": "Zebrafish", "refseq_name": "pyridoxal-dependent decarboxylase domain-containing protein 1", "refseq_ac": [ { "id": "NP_001004552", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001004552", "type": "external" } ], "gene_names_uniprotkb": "pdxdc1; wu:fj29c10; zgc:92179", "gene_names_refseq": "pdxdc1; wu:fj29c10; zgc:92179", "protein_names_uniprotkb": "Pyridoxal-dependent decarboxylase domain-containing protein 1; 4.1.1.-", "protein_names_refseq": "pyridoxal-dependent decarboxylase domain-containing protein 1", "tax_id": 7955, "disease": "", "pathway": " (dre:447813)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC081619.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505385, SAMEA4476732 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from BC081619.1. On Sep 30, 2011 this sequence version replaced NP_001004552.1., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0016831 carboxy-lyase activity;GO:0030170 pyridoxal phosphate binding", "go_cellular_component": "", "go_biological_process": "GO:0019752 carboxylic acid metabolic process", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q66HY8-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q5XIZ9-1", "uniprot_id": [ { "id": "RTKN2_DANRE", "url": "https://www.uniprot.org/uniprot/Q5XIZ9", "type": "external" } ], "mass": 72413.0, "length": 642, "protein_name": "Rhotekin-2", "gene_name": "rtkn2", "organism": "Zebrafish", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "rtkn2; plekhk1; rtkn2a; sb:cb777; wu:fl63a03; zgc:92568", "gene_names_refseq": "", "protein_names_uniprotkb": "Rhotekin-2; PH domain-containing family K member 1; Pleckstrin homology domain-containing family K member 1", "protein_names_refseq": "", "tax_id": 7955, "disease": "", "pathway": " (dre:449666)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "16109975;17703193;21555364;22422859;22995292;26469318;29042450;34135935", "class_list": "", "function": "", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q568A2", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "GO:0007165 signal transduction;GO:0008284 positive regulation of cell population proliferation;GO:0030097 hemopoiesis", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "Q5XIZ9-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q5SPJ8-1", "uniprot_id": [ { "id": "XPOT_DANRE", "url": "https://www.uniprot.org/uniprot/Q5SPJ8", "type": "external" } ], "mass": 109348.0, "length": 961, "protein_name": "Exportin-T", "gene_name": "xpot", "organism": "Zebrafish", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "xpot; si:ch211-286m4.4", "gene_names_refseq": "", "protein_names_uniprotkb": "Exportin-T; Exportin(tRNA); tRNA exportin", "protein_names_refseq": "", "tax_id": 7955, "disease": "", "pathway": " (dre:558020)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "22761277;23594743;27189481;31053140", "class_list": "", "function": "Mediates the nuclear export of aminoacylated tRNAs., [UniProtKB]; tRNA nucleus export receptor which facilitates tRNA translocation across the nuclear pore complex., [UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0000049 tRNA binding;GO:0031267 small GTPase binding", "go_cellular_component": "GO:0005737 cytoplasm;GO:0016363 nuclear matrix;GO:0005634 nucleus", "go_biological_process": "GO:0071528 tRNA re-export from nucleus", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "Q5SPJ8-1", "record_type": "protein", "filter_code": "0000000.0000101.010000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q5RHX9-1", "uniprot_id": [ { "id": "Q5RHX9_DANRE", "url": "https://www.uniprot.org/uniprot/Q5RHX9", "type": "external" } ], "mass": 60018.0, "length": 526, "protein_name": "cyclin-dependent kinase", "gene_name": "cdk17", "organism": "Zebrafish", "refseq_name": "cyclin-dependent kinase 17", "refseq_ac": [ { "id": "NP_001188286", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001188286", "type": "external" } ], "gene_names_uniprotkb": "cdk17; si:ch211-172b12.3", "gene_names_refseq": "cdk17; si:ch211-172b12.3", "protein_names_uniprotkb": "cyclin-dependent kinase; 2.7.11.22", "protein_names_refseq": "cell division protein kinase 17; cyclin-dependent kinase 17; pctk2", "tax_id": 7955, "disease": "", "pathway": " (dre:798487)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "28252024", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GDQH01003602.1, SRR32588715.1673128.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000004.1. On Jan 15, 2011 this sequence version replaced XP_002661406.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NYW5", "ec_number_list": [ { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.7.11.13", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.13", "type": "external" }, { "id": "2.7.11.25", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.25", "type": "external" }, { "id": "2.7.10.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.1", "type": "external" }, { "id": "2.7.11.22", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.22", "type": "external" }, { "id": "2.7.11.21", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.21", "type": "external" }, { "id": "2.7.11.17", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.17", "type": "external" }, { "id": "2.7.12.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.1", "type": "external" }, { "id": "2.7.12.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.2", "type": "external" }, { "id": "2.7.11.24", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.24", "type": "external" }, { "id": "2.7.10.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.2", "type": "external" }, { "id": "2.7.11.23", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.23", "type": "external" }, { "id": "2.7.1.150", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.150", "type": "external" }, { "id": "2.7.11.12", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.12", "type": "external" }, { "id": "2.7.11.39", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.39", "type": "external" }, { "id": "2.7.11.11", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.11", "type": "external" }, { "id": "2.7.1.153", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.153", "type": "external" }, { "id": "2.7.1.137", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.137", "type": "external" }, { "id": "2.7.1.154", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.154", "type": "external" }, { "id": "2.7.11.26", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.26", "type": "external" }, { "id": "2.7.11.31", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.31", "type": "external" } ], "go_molecular_function": "GO:0005524 ATP binding;GO:0004693 cyclin-dependent protein serine/threonine kinase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0000307 cyclin-dependent protein kinase holoenzyme complex", "go_biological_process": "GO:1901987 regulation of cell cycle phase transition", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q5RHX9-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q5BL21-1", "uniprot_id": [ { "id": "CNIH2_DANRE", "url": "https://www.uniprot.org/uniprot/Q5BL21", "type": "external" } ], "mass": 18912.0, "length": 160, "protein_name": "Protein cornichon homolog 2", "gene_name": "cnih2", "organism": "Zebrafish", "refseq_name": "protein cornichon homolog 2", "refseq_ac": [ { "id": "NP_001013542", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001013542", "type": "external" } ], "gene_names_uniprotkb": "cnih2; CNIH-2; zgc:101874", "gene_names_refseq": "CNIH-2; cnih2; zgc:101874", "protein_names_uniprotkb": "Protein cornichon homolog 2; CNIH-2; Cornichon family AMPA receptor auxiliary protein 2", "protein_names_refseq": "cornichon homolog 2; protein cornichon homolog 2", "tax_id": 7955, "disease": "", "pathway": " (dre:541397); (R-DRE-204005); (R-DRE-5694530)", "pathway_count": 3, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC090830.1, BM082369.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505391, SAMEA3505392 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC090830.1., [RefSeq]; Regulates the trafficking and gating properties of AMPA-selective glutamate receptors (AMPARs)., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0005102 signaling receptor binding", "go_cellular_component": "GO:0016020 membrane;GO:0030425 dendrite;GO:0045202 synapse", "go_biological_process": "GO:0035249 synaptic transmission, glutamatergic;GO:0016192 vesicle-mediated transport", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q5BL21-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q5XIY8-1", "uniprot_id": [ { "id": "PAXI1_DANRE", "url": "https://www.uniprot.org/uniprot/Q5XIY8", "type": "external" } ], "mass": 108033.0, "length": 943, "protein_name": "PAX-interacting protein 1", "gene_name": "paxip1", "organism": "Zebrafish", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "paxip1; fa04b06; wu:fa04b06; zgc:92593", "gene_names_refseq": "", "protein_names_uniprotkb": "PAX-interacting protein 1; PAX transactivation activation domain-interacting protein", "protein_names_refseq": "", "tax_id": 7955, "disease": "congenital heart disease (Disease Ontology:DOID:1682)", "pathway": " (dre:449658)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "24240475;25420467;26469318;28149290;34943942", "class_list": "", "function": "Involved in DNA damage response. May function as transcriptional cofactor in TGF beta signaling. Accentuates Smad2-dependent transcription (By similarity)., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0031981 nuclear lumen", "go_biological_process": "GO:0006281 DNA repair;GO:0006351 DNA-templated transcription;GO:0006974 DNA damage response", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q5XIY8-1", "record_type": "protein", "filter_code": "0000000.0000111.010000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q5XIY4-1", "uniprot_id": [ { "id": "SDHF3_DANRE", "url": "https://www.uniprot.org/uniprot/Q5XIY4", "type": "external" } ], "mass": 14449.0, "length": 123, "protein_name": "Succinate dehydrogenase assembly factor 3, mitochondrial", "gene_name": "sdhaf3", "organism": "Zebrafish", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "sdhaf3; acn9; zgc:92826", "gene_names_refseq": "", "protein_names_uniprotkb": "Succinate dehydrogenase assembly factor 3, mitochondrial; SDH assembly factor 3; SDHAF3", "protein_names_refseq": "", "tax_id": 7955, "disease": "pheochromocytoma (Disease Ontology:DOID:0050771); paraganglioma (Disease Ontology:DOID:0050773); mitochondrial complex II deficiency (Disease Ontology:DOID:0060537)", "pathway": " (dre:449654); (R-DRE-9854311)", "pathway_count": 2, "publication_count": 5, "publication_id_list": "15520368;26235539;26469318;26876635;36835354", "class_list": "", "function": "Plays an essential role in the assembly of succinate dehydrogenase (SDH), an enzyme complex (also referred to as respiratory complex II) that is a component of both the tricarboxylic acid (TCA) cycle and the mitochondrial electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Promotes maturation of the iron-sulfur protein subunit of the SDH catalytic dimer, protecting it from the deleterious effects of oxidants. May act together with SDHAF1., [UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 3, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005739 mitochondrion;GO:0005759 mitochondrial matrix", "go_biological_process": "GO:0034553 mitochondrial respiratory chain complex II assembly", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q5XIY4-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q5XFY4-1", "uniprot_id": [ { "id": "BCL7A_DANRE", "url": "https://www.uniprot.org/uniprot/Q5XFY4", "type": "external" } ], "mass": 22125.0, "length": 201, "protein_name": "B-cell CLL/lymphoma 7 protein family member A", "gene_name": "bcl7a", "organism": "Zebrafish", "refseq_name": "B-cell CLL/lymphoma 7 protein family member A", "refseq_ac": [ { "id": "NP_997725", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_997725", "type": "external" } ], "gene_names_uniprotkb": "bcl7a; cb585; id:ibd1097; sb:cb585; wu:fk02d01; zgc:92023", "gene_names_refseq": "bcl7a; cb585; id:ibd1097; sb:cb585; wu:fk02d01; zgc:92023", "protein_names_uniprotkb": "B-cell CLL/lymphoma 7 protein family member A", "protein_names_refseq": "B-cell CLL/lymphoma 7 protein family member A; B-cell CLL/lymphoma 7A; BCL tumor suppressor 7A; BCL7A, BAF complex component", "tax_id": 7955, "disease": "", "pathway": " (dre:57952); (R-DRE-9933947)", "pathway_count": 2, "publication_count": 1, "publication_id_list": "15520368", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: AY394963.1, CN021189.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505372 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AY394963.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q6TLE3", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q5XFY4-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q502E5-1", "uniprot_id": [ { "id": "SMIM8_DANRE", "url": "https://www.uniprot.org/uniprot/Q502E5", "type": "external" } ], "mass": 11322.0, "length": 104, "protein_name": "Small integral membrane protein 8", "gene_name": "smim8", "organism": "Zebrafish", "refseq_name": "small integral membrane protein 8 isoform 1", "refseq_ac": [ { "id": "NP_001019604", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001019604", "type": "external" } ], "gene_names_uniprotkb": "smim8; fj99f07; si:busm1-189a20.6; si:ch211-241J12.5; si:ch211-241j12.5; wu:fj99f07; zgc:112287; zgc:136361", "gene_names_refseq": "fj99f07; si:busm1-189a20.6; si:ch211-241j12.5; smim8; wu:fj99f07; zgc:112287; zgc:136361", "protein_names_uniprotkb": "Small integral membrane protein 8", "protein_names_refseq": "UPF0708 protein C6orf162 homolog; small integral membrane protein 8 isoform 1", "tax_id": 7955, "disease": "", "pathway": " (dre:554139)", "pathway_count": 1, "publication_count": 3, "publication_id_list": "23594743;26469318;27189481", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC115096.1, EH474954.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA4476744, SAMEA4476758 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000020.1. On Jun 25, 2025 this sequence version replaced NP_001019604.2. Transcript Variant: This variant (1) represents the longer transcript and encodes the longer protein (isoform 1). Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q5RHI7;Q5SNV3", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0016020 membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "Q502E5-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q5U3P0-1", "uniprot_id": [ { "id": "PCID2_DANRE", "url": "https://www.uniprot.org/uniprot/Q5U3P0", "type": "external" } ], "mass": 46065.0, "length": 399, "protein_name": "PCI domain-containing protein 2", "gene_name": "pcid2", "organism": "Zebrafish", "refseq_name": "PCI domain-containing protein 2", "refseq_ac": [ { "id": "NP_001007382", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001007382", "type": "external" } ], "gene_names_uniprotkb": "pcid2; fa11f03; ik:tdsubc_1e10; im:6909928; tdsubc_1e10; wu:fa11f03; xx:tdsubc_1e10; zgc:101845", "gene_names_refseq": "fa11f03; ik:tdsubc_1e10; im:6909928; pcid2; tdsubc_1e10; wu:fa11f03; xx:tdsubc_1e10; zgc:101845", "protein_names_uniprotkb": "PCI domain-containing protein 2; CSN12-like protein", "protein_names_refseq": "CSN12-like protein; PCI domain-containing protein 2", "tax_id": 7955, "disease": "", "pathway": " (dre:492509)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC085454.1 [ECO:0000332] RNAseq introns :: partial sample support SAMEA3505370, SAMEA3505373 [ECO:0000350] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC085454.1. On Jul 6, 2005 this sequence version replaced XP_686453.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0003723 RNA binding;GO:0003690 double-stranded DNA binding", "go_cellular_component": "GO:0070390 transcription export complex 2", "go_biological_process": "GO:0016973 poly(A)+ mRNA export from nucleus;GO:0006368 transcription elongation by RNA polymerase II;GO:0000973 post-transcriptional tethering of RNA polymerase II gene DNA at nuclear periphery", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q5U3P0-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q566X6-1", "uniprot_id": [ { "id": "PTCD2_DANRE", "url": "https://www.uniprot.org/uniprot/Q566X6", "type": "external" } ], "mass": 43858.0, "length": 381, "protein_name": "Pentatricopeptide repeat-containing protein 2, mitochondrial", "gene_name": "ptcd2", "organism": "Zebrafish", "refseq_name": "pentatricopeptide repeat-containing protein 2, mitochondrial", "refseq_ac": [ { "id": "NP_001017612", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001017612", "type": "external" } ], "gene_names_uniprotkb": "ptcd2; zgc:112401", "gene_names_refseq": "ptcd2; zgc:112401", "protein_names_uniprotkb": "Pentatricopeptide repeat-containing protein 2, mitochondrial", "protein_names_refseq": "pentatricopeptide repeat-containing protein 2, mitochondrial", "tax_id": 7955, "disease": "", "pathway": " (dre:550275)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC093286.1 [ECO:0000332] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC093286.1., [RefSeq]; Involved in mitochondrial RNA maturation and mitochondrial respiratory chain function., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005739 mitochondrion", "go_biological_process": "GO:0006397 mRNA processing;GO:0007005 mitochondrion organization;GO:0050684 regulation of mRNA processing", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q566X6-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q4QRD7-1", "uniprot_id": [ { "id": "F110B_DANRE", "url": "https://www.uniprot.org/uniprot/Q4QRD7", "type": "external" } ], "mass": 42952.0, "length": 397, "protein_name": "Protein FAM110B", "gene_name": "fam110b", "organism": "Zebrafish", "refseq_name": "protein FAM110B", "refseq_ac": [ { "id": "NP_001020345", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001020345", "type": "external" } ], "gene_names_uniprotkb": "fam110b; fk89a03; si:dkey-43b14.3; wu:fk89a03; zgc:114139", "gene_names_refseq": "fam110b; fk89a03; si:dkey-43b14.3; wu:fk89a03; zgc:114139", "protein_names_uniprotkb": "Protein FAM110B", "protein_names_refseq": "protein FAM110B", "tax_id": 7955, "disease": "", "pathway": " (dre:573995)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC097194.1, EH433734.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA4476781, SAMEA4476791 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC097194.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005813 centrosome", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q4QRD7-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q5BJJ6-1", "uniprot_id": [ { "id": "MAT2B_DANRE", "url": "https://www.uniprot.org/uniprot/Q5BJJ6", "type": "external" } ], "mass": 36359.0, "length": 323, "protein_name": "Methionine adenosyltransferase 2 subunit beta", "gene_name": "mat2b", "organism": "Zebrafish", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "mat2b; fc55d01; wu:fb48h02; wu:fc55d01; zgc:110308", "gene_names_refseq": "", "protein_names_uniprotkb": "Methionine adenosyltransferase 2 subunit beta; MAT II beta; Methionine adenosyltransferase II beta", "protein_names_refseq": "", "tax_id": 7955, "disease": "", "pathway": " (dre:541347); (R-DRE-156581); (R-DRE-5689880)", "pathway_count": 3, "publication_count": 6, "publication_id_list": "11116086;16109975;22480165;26469318;27210033;28252024", "class_list": "", "function": "Regulatory subunit of S-adenosylmethionine synthetase 2, an enzyme that catalyzes the formation of S-adenosylmethionine from methionine and ATP. Regulates MAT2A catalytic activity by changing its kinetic properties, increasing its affinity for L-methionine. Can bind NADP (in vitro)., [UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0030234 enzyme regulator activity", "go_cellular_component": "GO:0048269 methionine adenosyltransferase complex", "go_biological_process": "GO:0006730 one-carbon metabolic process;GO:0006556 S-adenosylmethionine biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q5BJJ6-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q5BL33-1", "uniprot_id": [ { "id": "PGAP2_DANRE", "url": "https://www.uniprot.org/uniprot/Q5BL33", "type": "external" } ], "mass": 26490.0, "length": 231, "protein_name": "Acyltransferase PGAP2", "gene_name": "pgap2", "organism": "Zebrafish", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "pgap2; frag1; wu:fc51g11; zgc:101568", "gene_names_refseq": "", "protein_names_uniprotkb": "Acyltransferase PGAP2; 2.3.-.-; FGF receptor-activating protein 1; Post-GPI attachment to proteins factor 2", "protein_names_refseq": "", "tax_id": 7955, "disease": "hyperphosphatasia with impaired intellectual development syndrome 3 (Disease Ontology:DOID:0070435)", "pathway": " (dre:541417)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "Involved in the fatty acid remodeling steps of GPI-anchor maturation where the unsaturated acyl chain at sn-2 of inositol phosphate is replaced by a saturated stearoyl chain. May catalyze the second step of the fatty acid remodeling, by reacylating a lyso-GPI intermediate at sn-2 of inositol phosphate by a saturated chain. The fatty acid remodeling steps is critical for the integration of GPI-APs into lipid rafts., [UniProtKB, UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [ { "id": "2.3.-.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.-.-", "type": "external" } ], "go_molecular_function": "GO:0016740 transferase activity", "go_cellular_component": "GO:0000139 Golgi membrane;GO:0005789 endoplasmic reticulum membrane", "go_biological_process": "GO:0006506 GPI anchor biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q5BL33-1", "record_type": "protein", "filter_code": "0000000.0000011.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1LVV0-1", "uniprot_id": [ { "id": "FA83H_DANRE", "url": "https://www.uniprot.org/uniprot/Q1LVV0", "type": "external" } ], "mass": 134941.0, "length": 1192, "protein_name": "Protein FAM83H", "gene_name": "fam83hb; fam83h", "organism": "Zebrafish", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "fam83hb; fam83h; fa03f11; fam83h; si:ch211-199g17.1; wu:fa03f11", "gene_names_refseq": "", "protein_names_uniprotkb": "Protein FAM83H", "protein_names_refseq": "", "tax_id": 7955, "disease": "amelogenesis imperfecta type 3A (Disease Ontology:DOID:0110055)", "pathway": " (dre:565918)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "23594743;26469318", "class_list": "", "function": "May play a role in keratin cytoskeleton disassembly., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:1990254 keratin filament binding;GO:0019901 protein kinase binding", "go_cellular_component": "GO:0005856 cytoskeleton", "go_biological_process": "GO:0007165 signal transduction;GO:0030335 positive regulation of cell migration;GO:0044380 protein localization to cytoskeleton;GO:0045104 intermediate filament cytoskeleton organization", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "Q1LVV0-1", "record_type": "protein", "filter_code": "0000000.0000111.010000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1MT89-1", "uniprot_id": [ { "id": "Q1MT89_DANRE", "url": "https://www.uniprot.org/uniprot/Q1MT89", "type": "external" } ], "mass": 48470.0, "length": 450, "protein_name": "Cell division cycle-associated protein 3", "gene_name": "cdca3", "organism": "Zebrafish", "refseq_name": "cell division cycle-associated protein 3", "refseq_ac": [ { "id": "NP_001038514", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001038514", "type": "external" } ], "gene_names_uniprotkb": "cdca3; sb:cb644; si:ch211-69g19.2; wu:fb30h01; wu:fi22d01; zgc:158243", "gene_names_refseq": "cdca3; sb:cb644; si:ch211-69g19.2; wu:fb30h01; wu:fi22d01; zgc:158243", "protein_names_uniprotkb": "Cell division cycle-associated protein 3", "protein_names_refseq": "cell division cycle-associated protein 3", "tax_id": 7955, "disease": "", "pathway": " (dre:564374)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "27189481", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC155129.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505374, SAMEA3505377 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AL929502.10. On or before Sep 1, 2006 this sequence version replaced XP_686976.1, XP_708594.1, XP_708595.1., [RefSeq]", "predicted_glycosites": 2, "predicted_n_glycosites": 0, "predicted_o_glycosites": 2, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 2, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1N9V3;A0AC58HH01;A0AC58HH04", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "GO:0051301 cell division", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q1MT89-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q2PRM2-1", "uniprot_id": [ { "id": "Q2PRM2_DANRE", "url": "https://www.uniprot.org/uniprot/Q2PRM2", "type": "external" } ], "mass": 36734.0, "length": 325, "protein_name": "Olfactory receptor", "gene_name": "or41a2", "organism": "Zebrafish", "refseq_name": "odorant receptor 108-3", "refseq_ac": [ { "id": "NP_001092243", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001092243", "type": "external" } ], "gene_names_uniprotkb": "or41a2; or10.1; or108-3; zgc:165563", "gene_names_refseq": "or10.1; or108-3; or41a2; zgc:165563", "protein_names_uniprotkb": "Olfactory receptor", "protein_names_refseq": "Dr3OR6.1; odorant receptor 108-3; odorant receptor, family D, subfamily 108, member 3", "tax_id": 7955, "disease": "", "pathway": " (dre:100073337)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "15824306;16332259;20333175;21834959;26108469;29020985;32295537", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC142864.1, EH440429.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505380, SAMEA3505383 [ECO:0000348] ##Evidence-Data-END## ##RefSeq-Attributes-START## CDS uses downstream in-frame AUG :: lack of evidence for use of upstream AUG ##RefSeq-Attributes-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000010.1. On Jun 14, 2024 this sequence version replaced NP_001092243.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M3BD88", "ec_number_list": [], "go_molecular_function": "GO:0004930 G protein-coupled receptor activity;GO:0004984 olfactory receptor activity", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q2PRM2-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q5RI09-1", "uniprot_id": [ { "id": "Q5RI09_DANRE", "url": "https://www.uniprot.org/uniprot/Q5RI09", "type": "external" } ], "mass": 265981.0, "length": 2352, "protein_name": "Nucleoprotein TPR", "gene_name": "tprb", "organism": "Zebrafish", "refseq_name": "translocated promoter region b, nuclear basket protein", "refseq_ac": [ { "id": "NP_001025294", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001025294", "type": "external" } ], "gene_names_uniprotkb": "tprb; si:dkey-97o5.5; tpr; wu:fi76g05", "gene_names_refseq": "si:dkey-97o5.5; tprb; tpr; wu:fi76g05", "protein_names_uniprotkb": "Nucleoprotein TPR; NPC-associated intranuclear protein", "protein_names_refseq": "translocated promoter region (to activated MET oncogene); translocated promoter region b (to activated MET oncogene); translocated promoter region b, nuclear basket protein", "tax_id": 7955, "disease": "autosomal recessive intellectual developmental disorder (Disease Ontology:DOID:0060308)", "pathway": " (dre:558883); (R-DRE-159227); (R-DRE-159231); (R-DRE-159236); (R-DRE-1855170); (R-DRE-1855196); (R-DRE-1855229); (R-DRE-191859); (R-DRE-3108214); (R-DRE-3232142); (R-DRE-3301854); (R-DRE-3371453); (R-DRE-4551638)", "pathway_count": 13, "publication_count": 6, "publication_id_list": "15520368;16631158;19500364;26469318;34722501;36493774", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GFIL01041776.1, SRR26395017.332162.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000020.1. On Sep 1, 2006 this sequence version replaced XP_687252.1., [RefSeq]", "predicted_glycosites": 7, "predicted_n_glycosites": 0, "predicted_o_glycosites": 7, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 7, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1N766", "ec_number_list": [], "go_molecular_function": "GO:0017056 structural constituent of nuclear pore", "go_cellular_component": "GO:0005643 nuclear pore;GO:0005819 spindle;GO:0031965 nuclear membrane;GO:0000776 kinetochore;GO:0034399 nuclear periphery", "go_biological_process": "GO:0051301 cell division;GO:0051028 mRNA transport;GO:0006606 protein import into nucleus;GO:0006406 mRNA export from nucleus;GO:1901673 regulation of mitotic spindle assembly", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q5RI09-1", "record_type": "protein", "filter_code": "0000000.0000111.010000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q5EB20-1", "uniprot_id": [ { "id": "RIPR3_DANRE", "url": "https://www.uniprot.org/uniprot/Q5EB20", "type": "external" } ], "mass": 109841.0, "length": 978, "protein_name": "RIPOR family member 3", "gene_name": "ripor3", "organism": "Zebrafish", "refseq_name": "RIPOR family member 3", "refseq_ac": [ { "id": "NP_001012517", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001012517", "type": "external" } ], "gene_names_uniprotkb": "ripor3; fam65c; si:dkey-107i16.2; zgc:113070", "gene_names_refseq": "fam65c; ripor3; si:dkey-107i16.2; zgc:113070", "protein_names_uniprotkb": "RIPOR family member 3", "protein_names_refseq": "RIPOR family member 3; family with sequence similarity 65, member C; protein FAM65C", "tax_id": 7955, "disease": "", "pathway": " (dre:503535)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC090162.1, SRR26395039.1931418.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA898400, SAMN06645147 [ECO:0000348] ##Evidence-Data-END## ##RefSeq-Attributes-START## CDS uses downstream in-frame AUG :: upstream AUG and CDS extension is not conserved ##RefSeq-Attributes-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000006.1. On Jun 26, 2024 this sequence version replaced NP_001012517.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q5EB20-1", "record_type": "protein", "filter_code": "0000000.0000001.010000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q503T5-1", "uniprot_id": [ { "id": "TATD3_DANRE", "url": "https://www.uniprot.org/uniprot/Q503T5", "type": "external" } ], "mass": 29517.0, "length": 266, "protein_name": "Putative deoxyribonuclease tatdn3", "gene_name": "tatdn3", "organism": "Zebrafish", "refseq_name": "putative deoxyribonuclease tatdn3", "refseq_ac": [ { "id": "NP_001018405", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001018405", "type": "external" } ], "gene_names_uniprotkb": "tatdn3; si:ch211-147d7.4; zgc:110166", "gene_names_refseq": "si:ch211-147d7.4; tatdn3; zgc:110166", "protein_names_uniprotkb": "Putative deoxyribonuclease tatdn3; 3.1.21.-", "protein_names_refseq": "putative deoxyribonuclease tatdn3", "tax_id": 7955, "disease": "", "pathway": " (dre:553592)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC095191.1, EH538234.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505372, SAMEA3505378 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC095191.1., [RefSeq]; Exhibits 3'-exonuclease and apurinic/apyrimidinic (AP) endonuclease activities (in vitro). Show preferential AP endonuclease activity on double-stranded DNA substrates and 3'- exonuclease activity on single-stranded DNA., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0008310 single-stranded DNA 3'-5' DNA exonuclease activity;GO:0046872 metal ion binding;GO:0003906 DNA-(apurinic or apyrimidinic site) endonuclease activity;GO:0016788 hydrolase activity, acting on ester bonds", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q503T5-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q5XJD3-1", "uniprot_id": [ { "id": "FIP1_DANRE", "url": "https://www.uniprot.org/uniprot/Q5XJD3", "type": "external" } ], "mass": 62966.0, "length": 570, "protein_name": "Pre-mRNA 3'-end-processing factor FIP1", "gene_name": "fip1l1b; fip1l1", "organism": "Zebrafish", "refseq_name": "pre-mRNA 3'-end-processing factor FIP1", "refseq_ac": [ { "id": "NP_001006042", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001006042", "type": "external" } ], "gene_names_uniprotkb": "fip1l1b; fip1l1; fip1l1; wu:fd36f11; zgc:103421", "gene_names_refseq": "fip1l1b; fip1l1; wu:fd36f11; zgc:103421", "protein_names_uniprotkb": "Pre-mRNA 3'-end-processing factor FIP1; FIP1-like 1 protein", "protein_names_refseq": "FIP1 like 1; FIP1-like 1 protein; pre-mRNA 3'-end-processing factor FIP1", "tax_id": 7955, "disease": "", "pathway": " (dre:450021); (R-DRE-73856); (R-DRE-77595); (R-DRE-9770562)", "pathway_count": 4, "publication_count": 1, "publication_id_list": "18307296", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC083370.1, BC165170.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC083370.1. On Apr 15, 2008 this sequence version replaced NP_001096611.1., [RefSeq]; Involved in mRNA processing., [UniProtKB]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 2, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005847 mRNA cleavage and polyadenylation specificity factor complex;GO:0005634 nucleus", "go_biological_process": "GO:0006398 mRNA 3'-end processing by stem-loop binding and cleavage;GO:0006397 mRNA processing", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q5XJD3-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000001001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q503D6-1", "uniprot_id": [ { "id": "CCNQ_DANRE", "url": "https://www.uniprot.org/uniprot/Q503D6", "type": "external" } ], "mass": 28441.0, "length": 247, "protein_name": "Cyclin-Q", "gene_name": "ccnq", "organism": "Zebrafish", "refseq_name": "cyclin-Q", "refseq_ac": [ { "id": "NP_001018459", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001018459", "type": "external" } ], "gene_names_uniprotkb": "ccnq; fam58a; zgc:110684", "gene_names_refseq": "ccnq; fam58a; zgc:110684", "protein_names_uniprotkb": "Cyclin-Q; Cyclin-related protein FAM58A", "protein_names_refseq": "cyclin-Q; cyclin-related protein FAM58A; family with sequence similarity 58, member A", "tax_id": 7955, "disease": "syndactyly-telecanthus-anogenital and renal malformations syndrome (Disease Ontology:DOID:0111931)", "pathway": " (dre:553650)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC095369.1, EH452431.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA4476823 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC095369.1. On Jul 6, 2005 this sequence version replaced XP_690328.1., [RefSeq]; May be an activating cyclin for the cyclin-associated kinase CDK10., [UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006357 regulation of transcription by RNA polymerase II", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q503D6-1", "record_type": "protein", "filter_code": "0000000.0000011.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1LY09-1", "uniprot_id": [ { "id": "Q1LY09_DANRE", "url": "https://www.uniprot.org/uniprot/Q1LY09", "type": "external" } ], "mass": 58811.0, "length": 497, "protein_name": "Coiled-coil domain-containing protein 181", "gene_name": "ccdc181", "organism": "Zebrafish", "refseq_name": "coiled-coil domain-containing protein 181", "refseq_ac": [ { "id": "NP_001122012", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001122012", "type": "external" } ], "gene_names_uniprotkb": "ccdc181; si:ch211-232d19.4", "gene_names_refseq": "ccdc181; si:ch211-232d19.4", "protein_names_uniprotkb": "Coiled-coil domain-containing protein 181", "protein_names_refseq": "coiled-coil domain-containing protein 181", "tax_id": 7955, "disease": "", "pathway": " (dre:566663)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "26469318;27189481", "class_list": "", "function": "##Evidence-Data-START## RNAseq introns :: single sample supports all introns SAMEA3505384, SAMEA3505391 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BX247907.8. On Jul 31, 2008 this sequence version replaced XP_695035.1., [RefSeq]; Microtubule-binding protein that is essential for the integrity and function of the manchette, facilitating proper sperm head shaping and subsequent flagellum formation during spermatogenesis., [UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NI41", "ec_number_list": [], "go_molecular_function": "GO:0008017 microtubule binding", "go_cellular_component": "GO:0005874 microtubule;GO:0031514 motile cilium", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "Q1LY09-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q4V8V1-1", "uniprot_id": [ { "id": "BM1LA_DANRE", "url": "https://www.uniprot.org/uniprot/Q4V8V1", "type": "external" } ], "mass": 37610.0, "length": 323, "protein_name": "Breast cancer metastasis-suppressor 1-like protein-A", "gene_name": "brms1la", "organism": "Zebrafish", "refseq_name": "breast cancer metastasis-suppressor 1-like protein-A", "refseq_ac": [ { "id": "NP_001025273", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001025273", "type": "external" } ], "gene_names_uniprotkb": "brms1la; brms1l; im:7136473; zgc:114129", "gene_names_refseq": "brms1la; brms1l; im:7136473; zgc:114129", "protein_names_uniprotkb": "Breast cancer metastasis-suppressor 1-like protein-A", "protein_names_refseq": "breast cancer metastasis-suppressor 1-like a; breast cancer metastasis-suppressor 1-like protein-A; breast cancer metastasis-suppressor 1-like protein", "tax_id": 7955, "disease": "", "pathway": " (dre:792017)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: SRR32588727.2177791.1, SRR26395028.1416205.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000017.1. On or before Aug 4, 2025 this sequence version replaced XP_005158703.1, NP_001025273.1., [RefSeq]; Involved in the histone deacetylase (HDAC1)-dependent transcriptional repression activity., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0042826 histone deacetylase binding", "go_cellular_component": "GO:0070822 Sin3-type complex;GO:0005654 nucleoplasm", "go_biological_process": "GO:0000122 negative regulation of transcription by RNA polymerase II;GO:0006351 DNA-templated transcription;GO:0010468 regulation of gene expression", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q4V8V1-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q2PRK2-1", "uniprot_id": [ { "id": "Q2PRK2_DANRE", "url": "https://www.uniprot.org/uniprot/Q2PRK2", "type": "external" } ], "mass": 38125.0, "length": 336, "protein_name": "Odorant receptor 109-2", "gene_name": "or42a8", "organism": "Zebrafish", "refseq_name": "odorant receptor 109-2", "refseq_ac": [ { "id": "NP_001124270", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001124270", "type": "external" } ], "gene_names_uniprotkb": "or42a8; or10.12; or109-2", "gene_names_refseq": "or10.12; or109-2; or42a8", "protein_names_uniprotkb": "Odorant receptor 109-2", "protein_names_refseq": "Dr3OR10.19; odorant receptor 109-2; odorant receptor, family D, subfamily 109, member 2", "tax_id": 7955, "disease": "", "pathway": " (dre:100147989)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "15824306;16332259;20333175;26108469;32295537", "class_list": "", "function": "PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from DQ306010.1. On Aug 6, 2008 this sequence version replaced XP_001919727.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0004930 G protein-coupled receptor activity;GO:0004984 olfactory receptor activity", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q2PRK2-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q5RG20-1", "uniprot_id": [ { "id": "Q5RG20_DANRE", "url": "https://www.uniprot.org/uniprot/Q5RG20", "type": "external" } ], "mass": 110988.0, "length": 991, "protein_name": "Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 2a", "gene_name": "asap2a", "organism": "Zebrafish", "refseq_name": "arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 2a", "refseq_ac": [ { "id": "NP_001038672", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001038672", "type": "external" } ], "gene_names_uniprotkb": "asap2a; ddef2a; si:dkey-27p7.2", "gene_names_refseq": "asap2a; ddef2a; si:dkey-27p7.2", "protein_names_uniprotkb": "Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 2a", "protein_names_refseq": "arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 2a; development and differentiation enhancing factor 2a", "tax_id": 7955, "disease": "", "pathway": " (dre:570669)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "26469318;33757938", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: SRR32588729.19286398.1, SRR32588735.2904537.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA4476729, SAMEA4476730 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000017.1. On Sep 1, 2006 this sequence version replaced XP_699266.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NA57;A0AC58HNJ5", "ec_number_list": [], "go_molecular_function": "GO:0005096 GTPase activator activity;GO:0008270 zinc ion binding", "go_cellular_component": "GO:0005794 Golgi apparatus;GO:0016020 membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "Q5RG20-1", "record_type": "protein", "filter_code": "0000000.0000101.010000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1LWY5-1", "uniprot_id": [ { "id": "Q1LWY5_DANRE", "url": "https://www.uniprot.org/uniprot/Q1LWY5", "type": "external" } ], "mass": 169889.0, "length": 1523, "protein_name": "Zinc finger MYM-type protein 4", "gene_name": "zmym4.1", "organism": "Zebrafish", "refseq_name": "zinc finger MYM-type protein 4", "refseq_ac": [ { "id": "NP_001037777", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001037777", "type": "external" } ], "gene_names_uniprotkb": "zmym4.1; im:7136725; si:ch211-173p18.1; wu:fd19d11; zmym4", "gene_names_refseq": "im:7136725; si:ch211-173p18.1; wu:fd19d11; zmym4.1; zmym4", "protein_names_uniprotkb": "Zinc finger MYM-type protein 4", "protein_names_refseq": "zinc finger MYM-type protein 4; zinc finger, MYM-type 4", "tax_id": 7955, "disease": "", "pathway": " (dre:327248)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "26469318", "class_list": "", "function": "##Evidence-Data-START## RNAseq introns :: partial sample support SAMEA3505370, SAMEA3505374 [ECO:0000350] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000019.1. On Aug 25, 2006 this sequence version replaced XP_688028.1., [RefSeq]", "predicted_glycosites": 2, "predicted_n_glycosites": 0, "predicted_o_glycosites": 2, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 2, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1N9D6", "ec_number_list": [], "go_molecular_function": "GO:0003677 DNA binding;GO:0008270 zinc ion binding", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q1LWY5-1", "record_type": "protein", "filter_code": "0000000.0000101.010000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q5RGT2-1", "uniprot_id": [ { "id": "Q5RGT2_DANRE", "url": "https://www.uniprot.org/uniprot/Q5RGT2", "type": "external" } ], "mass": 57715.0, "length": 527, "protein_name": "Choline/ethanolamine transporter FLVCR1", "gene_name": "flvcr1", "organism": "Zebrafish", "refseq_name": "choline/ethanolamine transporter FLVCR1", "refseq_ac": [ { "id": "NP_001020693", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001020693", "type": "external" } ], "gene_names_uniprotkb": "flvcr1; si:ch211-147d7.6", "gene_names_refseq": "flvcr1; si:ch211-147d7.6", "protein_names_uniprotkb": "Choline/ethanolamine transporter FLVCR1; Heme transporter FLVCR1", "protein_names_refseq": "FLVCR heme transporter 1; choline/ethanolamine transporter FLVCR1; feline leukemia virus subgroup C cellular receptor 1", "tax_id": 7955, "disease": "neurodevelopmental disorder with microcephaly, absent speech, and hypotonia (Disease Ontology:DOID:0051030); retinopathy sensory neuropathy syndrome (Disease Ontology:DOID:0061157); Diamond-Blackfan anemia (Disease Ontology:DOID:1339)", "pathway": " (dre:562595); (R-DRE-189451); (R-DRE-917937)", "pathway_count": 3, "publication_count": 10, "publication_id_list": "25603810;25795718;26469318;27189481;28694436;29954941;31307377;32494702;34453946;36631598", "class_list": "", "function": "##Evidence-Data-START## RNAseq introns :: partial sample support SAMEA3505370, SAMEA3505372 [ECO:0000350] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000020.1. On Jul 16, 2005 this sequence version replaced XP_691066.1., [RefSeq]; Endothelial cells require functional FLVCR1a during developmental and adult angiogenesis., [RefSeq, PubMed]; Uniporter that mediates the transport of extracellular choline and ethanolamine into cells, thereby playing a key role in phospholipid biosynthesis. Choline and ethanolamine are the precursors of phosphatidylcholine and phosphatidylethanolamine, respectively, the two most abundant phospholipids. Transport is not coupled with proton transport and is exclusively driven by the choline (or ethanolamine) gradient across the plasma membrane. Also acts as a heme b transporter that mediates heme efflux from the cytoplasm to the extracellular compartment., [UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 3, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1N772", "ec_number_list": [], "go_molecular_function": "GO:0015232 heme transmembrane transporter activity;GO:0020037 heme binding", "go_cellular_component": "GO:0005886 plasma membrane;GO:0031966 mitochondrial membrane;GO:0005739 mitochondrion;GO:0016020 membrane", "go_biological_process": "GO:0043249 erythrocyte maturation;GO:0030218 erythrocyte differentiation;GO:0006783 heme biosynthetic process;GO:0042168 heme metabolic process;GO:0006839 mitochondrial transport", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "Q5RGT2-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q5RJ20-1", "uniprot_id": [ { "id": "AP2D_DANRE", "url": "https://www.uniprot.org/uniprot/Q5RJ20", "type": "external" } ], "mass": 49509.0, "length": 450, "protein_name": "Transcription factor AP-2-delta", "gene_name": "tfap2d", "organism": "Zebrafish", "refseq_name": "transcription factor AP-2-delta", "refseq_ac": [ { "id": "NP_001020717", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001020717", "type": "external" } ], "gene_names_uniprotkb": "tfap2d; si:dkey-5e16.2; zgc:114196", "gene_names_refseq": "si:dkey-5e16.2; tfap2d; zgc:114196", "protein_names_uniprotkb": "Transcription factor AP-2-delta; AP-2-delta", "protein_names_refseq": "AP-2-delta; transcription factor AP-2-delta", "tax_id": 7955, "disease": "sleep disorder (Disease Ontology:DOID:535)", "pathway": " (dre:566838); (R-DRE-8866907)", "pathway_count": 2, "publication_count": 1, "publication_id_list": "23594743", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC097244.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC097244.1. On Jul 16, 2005 this sequence version replaced XP_695217.1., [RefSeq]; Sequence-specific DNA-binding protein that interacts with inducible viral and cellular enhancer elements to regulate transcription of selected genes. AP-2 factors bind to the consensus sequence 5'-GCCNNNGGC-3' and activate genes involved in a large spectrum of important biological functions (By similarity)., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q4V8R1", "ec_number_list": [], "go_molecular_function": "GO:0000977 RNA polymerase II transcription regulatory region sequence-specific DNA binding;GO:0001228 DNA-binding transcription activator activity, RNA polymerase II-specific;GO:0003677 DNA binding;GO:0003700 DNA-binding transcription factor activity", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0042127 regulation of cell population proliferation;GO:0045944 positive regulation of transcription by RNA polymerase II", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q5RJ20-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1MT18-1", "uniprot_id": [ { "id": "Q1MT18_DANRE", "url": "https://www.uniprot.org/uniprot/Q1MT18", "type": "external" } ], "mass": 60548.0, "length": 547, "protein_name": "REST corepressor 3", "gene_name": "rcor3", "organism": "Zebrafish", "refseq_name": "REST corepressor 3", "refseq_ac": [ { "id": "NP_001038494", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001038494", "type": "external" } ], "gene_names_uniprotkb": "rcor3; si:ch211-284e20.6", "gene_names_refseq": "rcor3; si:ch211-284e20.6", "protein_names_uniprotkb": "REST corepressor 3", "protein_names_refseq": "REST corepressor 3", "tax_id": 7955, "disease": "", "pathway": " (dre:563808)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "24240475;26469318;27189481;31301200", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: SRR32588727.945144.1, SRR32588720.2051813.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505390, SAMEA4476731 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000022.1. On Sep 1, 2006 this sequence version replaced XP_692263.1., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1N9W5", "ec_number_list": [], "go_molecular_function": "GO:0003714 transcription corepressor activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005667 transcription regulator complex;GO:0000118 histone deacetylase complex", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006357 regulation of transcription by RNA polymerase II;GO:0045892 negative regulation of DNA-templated transcription", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "Q1MT18-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q5RGQ1-1", "uniprot_id": [ { "id": "Q5RGQ1_DANRE", "url": "https://www.uniprot.org/uniprot/Q5RGQ1", "type": "external" } ], "mass": 28225.0, "length": 254, "protein_name": "Tetraspanin", "gene_name": "tspan11", "organism": "Zebrafish", "refseq_name": "tetraspanin-11", "refseq_ac": [ { "id": "NP_001038502", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001038502", "type": "external" } ], "gene_names_uniprotkb": "tspan11; si:dkey-21h14.7", "gene_names_refseq": "si:dkey-21h14.7; tspan11", "protein_names_uniprotkb": "Tetraspanin", "protein_names_refseq": "tetraspanin-11", "tax_id": 7955, "disease": "", "pathway": " (dre:564029)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "26469318;31349972", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GDQQ01029682.1, GDQH01007354.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505373, SAMEA3505376 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000004.1. On Sep 1, 2006 this sequence version replaced XP_692481.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1N9U5", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005886 plasma membrane;GO:0016020 membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "Q5RGQ1-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1RMB5-1", "uniprot_id": [ { "id": "SHSL1_DANRE", "url": "https://www.uniprot.org/uniprot/Q1RMB5", "type": "external" } ], "mass": 23651.0, "length": 203, "protein_name": "Protein shisa-like-1a", "gene_name": "shisal1a", "organism": "Zebrafish", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "shisal1a; si:dkey-14k9.2; zgc:136242", "gene_names_refseq": "", "protein_names_uniprotkb": "Protein shisa-like-1a", "protein_names_refseq": "", "tax_id": 7955, "disease": "", "pathway": " (dre:560435)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "23594743;26469318;27189481;36791723", "class_list": "", "function": "", "predicted_glycosites": 5, "predicted_n_glycosites": 5, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 5, "binding_glycan_count": 0, "secondary_ac_list": "Q5TYY3", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0016020 membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "Q1RMB5-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000010000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q5BKX0-1", "uniprot_id": [ { "id": "TM248_DANRE", "url": "https://www.uniprot.org/uniprot/Q5BKX0", "type": "external" } ], "mass": 35447.0, "length": 315, "protein_name": "Transmembrane protein 248", "gene_name": "tmem248", "organism": "Zebrafish", "refseq_name": "transmembrane protein 248", "refseq_ac": [ { "id": "NP_001013548", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001013548", "type": "external" } ], "gene_names_uniprotkb": "tmem248; zgc:103561", "gene_names_refseq": "tmem248; zgc:103561", "protein_names_uniprotkb": "Transmembrane protein 248", "protein_names_refseq": "UPF0458 protein C7orf42 homolog; transmembrane protein 248", "tax_id": 7955, "disease": "", "pathway": " (dre:541403)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC090900.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505375 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC090900.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0016020 membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q5BKX0-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q5SPF7-1", "uniprot_id": [ { "id": "UN93A_DANRE", "url": "https://www.uniprot.org/uniprot/Q5SPF7", "type": "external" } ], "mass": 51665.0, "length": 465, "protein_name": "N-acetylglucosamine transporter UNC93A", "gene_name": "unc93a", "organism": "Zebrafish", "refseq_name": "protein unc-93 homolog A", "refseq_ac": [ { "id": "NP_001038381", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001038381", "type": "external" } ], "gene_names_uniprotkb": "unc93a; Unc-93A; si:dkey-14a7.1", "gene_names_refseq": "Unc-93A; si:dkey-14a7.1; unc93a", "protein_names_uniprotkb": "N-acetylglucosamine transporter UNC93A; Protein unc-93 homolog A; Unc-93A", "protein_names_refseq": "protein unc-93 homolog A", "tax_id": 7955, "disease": "", "pathway": " (dre:559995)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "23594743", "class_list": "", "function": "##Evidence-Data-START## RNAseq introns :: partial sample support SAMEA4476756, SAMEA4476760 [ECO:0000350] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000020.1. On Sep 1, 2006 this sequence version replaced XP_688478.1., [RefSeq]; Specifically transports N-acetylglucosamine across the plasma membrane., [UniProtKB, UniProtKB]", "predicted_glycosites": 3, "predicted_n_glycosites": 3, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 3, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0015572 N-acetylglucosamine transmembrane transporter activity", "go_cellular_component": "GO:0005886 plasma membrane;GO:0016020 membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q5SPF7-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000010000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1LWD1-1", "uniprot_id": [ { "id": "Q1LWD1_DANRE", "url": "https://www.uniprot.org/uniprot/Q1LWD1", "type": "external" } ], "mass": 41053.0, "length": 373, "protein_name": "3.5.1.-; Uncharacterized protein LOC557125", "gene_name": "si:dkey-103i16.6", "organism": "Zebrafish", "refseq_name": "uncharacterized protein LOC557125", "refseq_ac": [ { "id": "NP_001038173", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001038173", "type": "external" } ], "gene_names_uniprotkb": "si:dkey-103i16.6", "gene_names_refseq": "si:dkey-103i16.6", "protein_names_uniprotkb": "3.5.1.-; Uncharacterized protein LOC557125", "protein_names_refseq": "uncharacterized protein LOC557125", "tax_id": 7955, "disease": "", "pathway": " (dre:557125)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "27189481", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: SRR26395015.754714.1, SRR26395014.905114.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505378 [ECO:0000348] ##Evidence-Data-END## ##RefSeq-Attributes-START## gene product(s) localized to mito. :: inferred from homology ##RefSeq-Attributes-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000018.1. On or before Jul 29, 2025 this sequence version replaced XP_005169992.1, NP_001038173.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0046872 metal ion binding;GO:0016740 transferase activity;GO:0070403 NAD+ binding;GO:0017136 histone deacetylase activity, NAD-dependent", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q1LWD1-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1LVK6-1", "uniprot_id": [ { "id": "Q1LVK6_DANRE", "url": "https://www.uniprot.org/uniprot/Q1LVK6", "type": "external" } ], "mass": 46846.0, "length": 445, "protein_name": "Vasodilator-stimulated phosphoprotein", "gene_name": "vaspb", "organism": "Zebrafish", "refseq_name": "vasodilator-stimulated phosphoprotein isoform X1", "refseq_ac": [ { "id": "XP_005173736", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005173736", "type": "external" } ], "gene_names_uniprotkb": "vaspb", "gene_names_refseq": "vaspb", "protein_names_uniprotkb": "Vasodilator-stimulated phosphoprotein", "protein_names_refseq": "vasodilator-stimulated phosphoprotein isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:550487); (R-DRE-446353)", "pathway_count": 2, "publication_count": 1, "publication_id_list": "40044042", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133193) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]; Ena/VASP proteins are actin-associated proteins involved in a range of processes dependent on cytoskeleton remodeling and cell polarity such as axon guidance, lamellipodial and filopodial dynamics, platelet activation and cell migration. VASP promotes actin filament elongation. It protects the barbed end of growing actin filaments against capping and increases the rate of actin polymerization in the presence of capping protein. VASP stimulates actin filament elongation by promoting the transfer of profilin-bound actin monomers onto the barbed end of growing actin filaments. Plays a role in actin-based mobility of Listeria monocytogenes in host cells. Regulates actin dynamics in platelets and plays an important role in regulating platelet aggregation., [UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 1, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 1, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 1, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 1, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 0, "biomarker_type": "", "glycan_count": 1, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M2BKY2", "ec_number_list": [], "go_molecular_function": "GO:0003779 actin binding;GO:0017124 SH3 domain binding;GO:0005522 profilin binding", "go_cellular_component": "GO:0005829 cytosol;GO:0005856 cytoskeleton;GO:0005923 bicellular tight junction;GO:0005925 focal adhesion;GO:0031258 lamellipodium membrane", "go_biological_process": "GO:0008154 actin polymerization or depolymerization;GO:0001843 neural tube closure;GO:0030838 positive regulation of actin filament polymerization;GO:0007411 axon guidance", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "Q1LVK6-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0100000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1LVS2-1", "uniprot_id": [ { "id": "Q1LVS2_DANRE", "url": "https://www.uniprot.org/uniprot/Q1LVS2", "type": "external" } ], "mass": 64611.0, "length": 575, "protein_name": "PX domain-containing protein kinase-like protein", "gene_name": "pxk", "organism": "Zebrafish", "refseq_name": "PX domain-containing protein kinase-like protein", "refseq_ac": [ { "id": "NP_001076277", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001076277", "type": "external" } ], "gene_names_uniprotkb": "pxk; sb:eu550; si:dkeyp-87e7.1", "gene_names_refseq": "pxk; sb:eu550; si:dkeyp-87e7.1", "protein_names_uniprotkb": "PX domain-containing protein kinase-like protein; Modulator of Na,K-ATPase", "protein_names_refseq": "PX domain-containing protein kinase-like protein", "tax_id": 7955, "disease": "", "pathway": " (dre:557065)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "15520368;24683187;26469318;27011661", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GDQH01007417.1, GDQQ01003529.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505377, SAMEA3505378 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000022.1. On Mar 15, 2007 this sequence version replaced XP_685137.2., [RefSeq]; Binds to and modulates brain Na,K-ATPase subunits ATP1B1 and ATP1B3 and may thereby participate in the regulation of electrical excitability and synaptic transmission. May not display kinase activity., [UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NBT5", "ec_number_list": [], "go_molecular_function": "GO:0003779 actin binding;GO:0004672 protein kinase activity;GO:0005524 ATP binding;GO:0035091 phosphatidylinositol binding", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005886 plasma membrane", "go_biological_process": "GO:0050804 modulation of chemical synaptic transmission", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "Q1LVS2-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q5RGY0-1", "uniprot_id": [ { "id": "Q5RGY0_DANRE", "url": "https://www.uniprot.org/uniprot/Q5RGY0", "type": "external" } ], "mass": 41834.0, "length": 360, "protein_name": "ethanolamine kinase", "gene_name": "etnk1", "organism": "Zebrafish", "refseq_name": "ethanolamine kinase 1 isoform X1", "refseq_ac": [ { "id": "XP_689471", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_689471", "type": "external" } ], "gene_names_uniprotkb": "etnk1", "gene_names_refseq": "etnk1", "protein_names_uniprotkb": "ethanolamine kinase; 2.7.1.82", "protein_names_refseq": "ethanolamine kinase 1 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:565971); (R-DRE-1483213)", "pathway_count": 2, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133179) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 9, 2008 this sequence version replaced XP_689471.2. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8N7T5U8", "ec_number_list": [ { "id": "2.7.1.32", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.32", "type": "external" }, { "id": "2.7.1.82", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.82", "type": "external" } ], "go_molecular_function": "GO:0004305 ethanolamine kinase activity;GO:0005524 ATP binding", "go_cellular_component": "GO:0005737 cytoplasm", "go_biological_process": "GO:0008654 phospholipid biosynthetic process;GO:0006646 phosphatidylethanolamine biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q5RGY0-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q2PRE9-1", "uniprot_id": [ { "id": "Q2PRE9_DANRE", "url": "https://www.uniprot.org/uniprot/Q2PRE9", "type": "external" } ], "mass": 34378.0, "length": 307, "protein_name": "Olfactory receptor", "gene_name": "or63b1", "organism": "Zebrafish", "refseq_name": "odorant receptor 122-1", "refseq_ac": [ { "id": "NP_001154872", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001154872", "type": "external" } ], "gene_names_uniprotkb": "or63b1; Dr3OR17.1; or122-1; or15.4", "gene_names_refseq": "Dr3OR17.1; or122-1; or15.4; or63b1", "protein_names_uniprotkb": "Olfactory receptor", "protein_names_refseq": "RUN domain containing 3B; odorant receptor 122-1; odorant receptor, family E, subfamily 122, member 1", "tax_id": 7955, "disease": "", "pathway": " (dre:100147865)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "15824306;16332259;20333175;26108469;32295537", "class_list": "", "function": "PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from DQ306073.1. On May 31, 2009 this sequence version replaced XP_001920506.1., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0004930 G protein-coupled receptor activity;GO:0004984 olfactory receptor activity;GO:0005549 odorant binding", "go_cellular_component": "GO:0005886 plasma membrane;GO:0016020 membrane", "go_biological_process": "GO:0050911 detection of chemical stimulus involved in sensory perception of smell", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q2PRE9-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q5TZ50-1", "uniprot_id": [ { "id": "Q5TZ50_DANRE", "url": "https://www.uniprot.org/uniprot/Q5TZ50", "type": "external" } ], "mass": 15394.0, "length": 138, "protein_name": "Urotensin 1 precursor", "gene_name": "uts1", "organism": "Zebrafish", "refseq_name": "urotensin 1 precursor", "refseq_ac": [ { "id": "NP_001025351", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001025351", "type": "external" } ], "gene_names_uniprotkb": "uts1; UCN1; si:ch211-243j20.4; ucn; wu:fq17a01", "gene_names_refseq": "UCN1; si:ch211-243j20.4; ucn; uts1; wu:fq17a01", "protein_names_uniprotkb": "Urotensin 1 precursor", "protein_names_refseq": "UI; urocortin; urotensin 1 precursor", "tax_id": 7955, "disease": "colitis (Disease Ontology:DOID:0060180); Parkinsonism (Disease Ontology:DOID:0080855); hypertension (Disease Ontology:DOID:10763); hypertrophic cardiomyopathy (Disease Ontology:DOID:11984); thromboangiitis obliterans (Disease Ontology:DOID:12918); dilated cardiomyopathy (Disease Ontology:DOID:12930); asthma (Disease Ontology:DOID:2841); congestive heart failure (Disease Ontology:DOID:6000)", "pathway": " (dre:563732)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "15171705;16037378;17013923;17436299;18403048;29883955;32581684;33721592;34931659;35046434", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC124468.1, GFIL01042904.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000020.1. On Aug 6, 2005 this sequence version replaced XP_692182.1. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications., [RefSeq]; Results describe the distribution of urotensin I, UIIalpha and UIIbeta mRNAs in different organs and the cellular localization of the three mRNAs in the spinal cord by in situ hybridization (ISH) histochemistry., [RefSeq, PubMed]; U1 localized in the preoptic area, periventricular hypothalamic and tectal regions, and dorsal part of the trigeminal motor nucleus and several nuclei of the dorsal telencephalon., [RefSeq, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 8, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1N7B1", "ec_number_list": [], "go_molecular_function": "GO:0005179 hormone activity", "go_cellular_component": "GO:0005576 extracellular region", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "Q5TZ50-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q32TF8-1", "uniprot_id": [ { "id": "EFHC2_DANRE", "url": "https://www.uniprot.org/uniprot/Q32TF8", "type": "external" } ], "mass": 85457.0, "length": 748, "protein_name": "EF-hand domain-containing family member C2", "gene_name": "efhc2", "organism": "Zebrafish", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "efhc2; cb847; flj22843; zgc:152706", "gene_names_refseq": "", "protein_names_uniprotkb": "EF-hand domain-containing family member C2", "protein_names_refseq": "", "tax_id": 7955, "disease": "", "pathway": " (dre:567323)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "16112844;26469318;27189481;30349665", "class_list": "", "function": "Microtubule inner protein (MIP) part of the dynein-decorated doublet microtubules (DMTs) in cilia axoneme, which is required for motile cilia beating., [UniProtKB, UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "Q08CU1", "ec_number_list": [], "go_molecular_function": "GO:0005509 calcium ion binding", "go_cellular_component": "GO:0005879 axonemal microtubule", "go_biological_process": "GO:1903251 multi-ciliated epithelial cell differentiation;GO:0048814 regulation of dendrite morphogenesis;GO:0039010 specification of pronephric distal tubule identity", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "Q32TF8-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q504A5-1", "uniprot_id": [ { "id": "TPMT_DANRE", "url": "https://www.uniprot.org/uniprot/Q504A5", "type": "external" } ], "mass": 26334.0, "length": 232, "protein_name": "Probable thiopurine S-methyltransferase", "gene_name": "tpmt.1; tpmt", "organism": "Zebrafish", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "tpmt.1; tpmt; si:ch73-345a19.2; tpmt; zgc:109981; zgc:92752", "gene_names_refseq": "", "protein_names_uniprotkb": "Probable thiopurine S-methyltransferase; 2.1.1.67; Thiopurine methyltransferase", "protein_names_refseq": "", "tax_id": 7955, "disease": "inflammatory bowel disease (Disease Ontology:DOID:0050589); poor metabolism of thiopurines 1 (Disease Ontology:DOID:0061004); poor metabolism of thiopurines (Disease Ontology:DOID:0080172); leukopenia (Disease Ontology:DOID:615); alopecia (Disease Ontology:DOID:987); acute lymphoblastic leukemia (Disease Ontology:DOID:9952)", "pathway": " (dre:436842); (R-DRE-156581); (R-DRE-9748787)", "pathway_count": 3, "publication_count": 1, "publication_id_list": "26469318", "class_list": "", "function": "", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 6, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [ { "id": "2.1.1.67", "url": "https://www.rhea-db.org/rhea/?query=ec:2.1.1.67", "type": "external" } ], "go_molecular_function": "GO:0008119 thiopurine S-methyltransferase activity", "go_cellular_component": "GO:0005737 cytoplasm", "go_biological_process": "GO:0032259 methylation", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q504A5-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q642H7-1", "uniprot_id": [ { "id": "RIC8A_DANRE", "url": "https://www.uniprot.org/uniprot/Q642H7", "type": "external" } ], "mass": 61996.0, "length": 548, "protein_name": "Chaperone Ric-8A", "gene_name": "ric8a", "organism": "Zebrafish", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "ric8a; zgc:92294", "gene_names_refseq": "", "protein_names_uniprotkb": "Chaperone Ric-8A; Synembryn-A", "protein_names_refseq": "", "tax_id": 7955, "disease": "", "pathway": " (dre:449546)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "Chaperone that specifically binds and folds nascent G alpha proteins prior to G protein heterotrimer formation. Also acts as a guanine nucleotide exchange factor (GEF) for G alpha proteins by stimulating exchange of bound GDP for free GTP., [UniProtKB, UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0001965 G-protein alpha-subunit binding;GO:0005085 guanyl-nucleotide exchange factor activity;GO:0044183 protein folding chaperone", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005886 plasma membrane;GO:0005938 cell cortex", "go_biological_process": "GO:0007186 G protein-coupled receptor signaling pathway", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q642H7-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q3LSS0-1", "uniprot_id": [ { "id": "C19L2_DANRE", "url": "https://www.uniprot.org/uniprot/Q3LSS0", "type": "external" } ], "mass": 110570.0, "length": 960, "protein_name": "CWF19-like protein 2", "gene_name": "cwf19l2", "organism": "Zebrafish", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "cwf19l2", "gene_names_refseq": "", "protein_names_uniprotkb": "CWF19-like protein 2", "protein_names_refseq": "", "tax_id": 7955, "disease": "", "pathway": " (dre:619271)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "15256591;26469318;27189481;32094353", "class_list": "", "function": "", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0071014 post-mRNA release spliceosomal complex", "go_biological_process": "GO:0000398 mRNA splicing, via spliceosome", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "Q3LSS0-1", "record_type": "protein", "filter_code": "0000000.0000101.010000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q501X2-1", "uniprot_id": [ { "id": "CEP72_DANRE", "url": "https://www.uniprot.org/uniprot/Q501X2", "type": "external" } ], "mass": 61297.0, "length": 532, "protein_name": "Centrosomal protein of 72 kDa", "gene_name": "cep72", "organism": "Zebrafish", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "cep72", "gene_names_refseq": "", "protein_names_uniprotkb": "Centrosomal protein of 72 kDa; Cep72", "protein_names_refseq": "", "tax_id": 7955, "disease": "", "pathway": " (dre:553488); (R-DRE-380320)", "pathway_count": 2, "publication_count": 4, "publication_id_list": "22767577;24926785;25576359;27189481", "class_list": "", "function": "Involved in the recruitment of key centrosomal proteins to the centrosome. Provides centrosomal microtubule-nucleation activity on the gamma-tubulin ring complexes (gamma-TuRCs) and has critical roles in forming a focused bipolar spindle, which is needed for proper tension generation between sister chromatids. Involved in centriole duplication (By similarity)., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005813 centrosome;GO:0034451 centriolar satellite", "go_biological_process": "GO:0007051 spindle organization;GO:0033566 gamma-tubulin complex localization", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "Q501X2-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1LWB0-1", "uniprot_id": [ { "id": "TXB1A_DANRE", "url": "https://www.uniprot.org/uniprot/Q1LWB0", "type": "external" } ], "mass": 89584.0, "length": 781, "protein_name": "Tax1-binding protein 1 homolog A", "gene_name": "tax1bp1a", "organism": "Zebrafish", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "tax1bp1a; si:ch211-204j16.2", "gene_names_refseq": "", "protein_names_uniprotkb": "Tax1-binding protein 1 homolog A", "protein_names_refseq": "", "tax_id": 7955, "disease": "", "pathway": " (dre:561219)", "pathway_count": 1, "publication_count": 3, "publication_id_list": "15520368;18638469;23594743", "class_list": "", "function": "May have anti-apoptotic activity., [UniProtKB, UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0008270 zinc ion binding", "go_cellular_component": "", "go_biological_process": "GO:0006915 apoptotic process", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "Q1LWB0-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1RM55-1", "uniprot_id": [ { "id": "PIHD1_DANRE", "url": "https://www.uniprot.org/uniprot/Q1RM55", "type": "external" } ], "mass": 32030.0, "length": 287, "protein_name": "PIH1 domain-containing protein 1", "gene_name": "pih1d1", "organism": "Zebrafish", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "pih1d1; im:7150545", "gene_names_refseq": "", "protein_names_uniprotkb": "PIH1 domain-containing protein 1", "protein_names_refseq": "", "tax_id": 7955, "disease": "", "pathway": " (dre:553260)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "26469318;27189481;29741156;35929537;38674426", "class_list": "", "function": "Involved in the assembly of C/D box small nucleolar ribonucleoprotein (snoRNP) particles (By similarity). Recruits the SWI/SNF complex to the core promoter of rRNA genes and enhances pre-rRNA transcription (By similarity). Mediates interaction of TELO2 with the R2TP complex which is necessary for the stability of MTOR and SMG1 (By similarity). Positively regulates the assembly and activity of the mTORC1 complex (By similarity)., [UniProtKB, UniProtKB]; Involved in the assembly of C/D box small nucleolar ribonucleoprotein (snoRNP) particles. Recruits the SWI/SNF complex to the core promoter of rRNA genes and enhances pre-rRNA transcription. Mediates interaction of TELO2 with the R2TP complex which is necessary for the stability of MTOR and SMG1. Positively regulates the assembly and activity of the mTORC1 complex., [UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A1L208;Q0V938;Q4V8T6;Q5XJL7", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0097255 R2TP complex;GO:0005634 nucleus;GO:0005737 cytoplasm;GO:1990904 ribonucleoprotein complex", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006364 rRNA processing;GO:0000492 box C/D snoRNP assembly;GO:0070286 axonemal dynein complex assembly", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q1RM55-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q32PL1-1", "uniprot_id": [ { "id": "PP1R7_DANRE", "url": "https://www.uniprot.org/uniprot/Q32PL1", "type": "external" } ], "mass": 39385.0, "length": 345, "protein_name": "Protein phosphatase 1 regulatory subunit 7", "gene_name": "ppp1r7", "organism": "Zebrafish", "refseq_name": "protein phosphatase 1 regulatory subunit 7 isoform 1", "refseq_ac": [ { "id": "NP_001032463", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001032463", "type": "external" } ], "gene_names_uniprotkb": "ppp1r7; im:7136431; sds22; zgc:123325", "gene_names_refseq": "im:7136431; ppp1r7; zgc:123325", "protein_names_uniprotkb": "Protein phosphatase 1 regulatory subunit 7; Protein phosphatase 1 regulatory subunit 22", "protein_names_refseq": "protein phosphatase 1 regulatory subunit 22; protein phosphatase 1 regulatory subunit 7 isoform 1; protein phosphatase 1 regulatory subunit 7", "tax_id": 7955, "disease": "", "pathway": " (dre:560323)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "26327813;26469318;27189481;28252024;30515132;40044042", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC108074.1, EH435612.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from EH446833.1 and BC108074.1. On Nov 26, 2005 this sequence version replaced XP_688815.1. Transcript Variant: This variant (1) represents the longer transcript and encodes the longer protein (isoform 1)., [RefSeq]; Regulatory subunit of protein phosphatase 1., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 1, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 1, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 1, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 1, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 0, "biomarker_type": "", "glycan_count": 1, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "Q32PL1-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0100000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1LWM5-1", "uniprot_id": [ { "id": "NHSL3_DANRE", "url": "https://www.uniprot.org/uniprot/Q1LWM5", "type": "external" } ], "mass": 145305.0, "length": 1325, "protein_name": "NHS-like protein 3", "gene_name": "nhsl3", "organism": "Zebrafish", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "nhsl3; si:ch211-194e15.5", "gene_names_refseq": "", "protein_names_uniprotkb": "NHS-like protein 3", "protein_names_refseq": "", "tax_id": 7955, "disease": "", "pathway": " (dre:100034579)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "23594743", "class_list": "", "function": "Able to directly activate the TNF-NFkappaB signaling pathway., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "GO:0030154 cell differentiation", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q1LWM5-1", "record_type": "protein", "filter_code": "0000000.0000101.010000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q5TZE1-1", "uniprot_id": [ { "id": "BTB6B_DANRE", "url": "https://www.uniprot.org/uniprot/Q5TZE1", "type": "external" } ], "mass": 53273.0, "length": 482, "protein_name": "BTB/POZ domain-containing protein 6-B", "gene_name": "btbd6b", "organism": "Zebrafish", "refseq_name": "BTB/POZ domain-containing protein 6-B", "refseq_ac": [ { "id": "NP_001019986", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001019986", "type": "external" } ], "gene_names_uniprotkb": "btbd6b; btbd6a; btbd6; sb:cb776; si:dkey-11b8.2; zgc:152751", "gene_names_refseq": "btbd6a; btbd6b; btbd6; sb:cb776; si:dkey-11b8.2; zgc:152751", "protein_names_uniprotkb": "BTB/POZ domain-containing protein 6-B", "protein_names_refseq": "BTB (POZ) domain containing 6; BTB/POZ domain-containing protein 6-A; BTB/POZ domain-containing protein 6-B; gacek", "tax_id": 7955, "disease": "", "pathway": " (dre:553533); (R-DRE-8951664); (R-DRE-983168)", "pathway_count": 3, "publication_count": 2, "publication_id_list": "20080956;23594743", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC124114.1, SRR26395028.499583.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000020.1. On or before Jul 6, 2005 this sequence version replaced XP_707808.1, XP_707809.1, XP_685184.1, XP_707810.1., [RefSeq]; Adapter protein for the cul3 E3 ubiquitin-protein ligase complex. Promotes the export of zbtb16/plzf from the nucleus to the cytoplasm and targets zbtb16/plzf for ubiquitination and degradation. Up-regulates neurog1 expression and antagonizes zbtb16/plzf, to promote neurogenesis (By similarity)., [UniProtKB, UniProtKB, UniProtKB, UniProtKB]; Btbd6a promotes the relocation of Plzf from nucleus to cytoplasm and targets Plzf for ubiquitination and degradation, [RefSeq, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005634 nucleus;GO:0005829 cytosol;GO:0005737 cytoplasm", "go_biological_process": "GO:0022008 neurogenesis;GO:0007399 nervous system development;GO:0030154 cell differentiation", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "Q5TZE1-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q5RH76-1", "uniprot_id": [ { "id": "Q5RH76_DANRE", "url": "https://www.uniprot.org/uniprot/Q5RH76", "type": "external" } ], "mass": 99051.0, "length": 883, "protein_name": "Olfactomedin-like 2Ba precursor", "gene_name": "olfml2ba", "organism": "Zebrafish", "refseq_name": "olfactomedin-like 2Ba precursor", "refseq_ac": [ { "id": "NP_001038314", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001038314", "type": "external" } ], "gene_names_uniprotkb": "olfml2ba; si:ch211-199m3.8", "gene_names_refseq": "olfml2ba; si:ch211-199m3.8", "protein_names_uniprotkb": "Olfactomedin-like 2Ba precursor", "protein_names_refseq": "olfactomedin-like 2Ba precursor", "tax_id": 7955, "disease": "", "pathway": " (dre:557997)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "26469318", "class_list": "", "function": "##Evidence-Data-START## RNAseq introns :: partial sample support SAMEA4476745, SAMEA4476755 [ECO:0000350] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000020.1. On Sep 1, 2006 this sequence version replaced XP_686253.1., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1N9F9", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005576 extracellular region;GO:0005615 extracellular space", "go_biological_process": "GO:0007165 signal transduction", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q5RH76-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q5RGT6-1", "uniprot_id": [ { "id": "ANGE2_DANRE", "url": "https://www.uniprot.org/uniprot/Q5RGT6", "type": "external" } ], "mass": 65330.0, "length": 569, "protein_name": "RNA 2',3'-cyclic phosphatase angel2", "gene_name": "angel2", "organism": "Zebrafish", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "angel2; fl78e02; si:ch211-181h6.2; wu:fl78e02; zgc:153829", "gene_names_refseq": "", "protein_names_uniprotkb": "RNA 2',3'-cyclic phosphatase angel2; 3.-.-.-", "protein_names_refseq": "", "tax_id": 7955, "disease": "", "pathway": " (dre:562704)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "23594743", "class_list": "", "function": "RNA 2',3'-cyclic phosphatase that catalyzes the hydrolysis of RNA molecules with a 2',3'-cyclic phosphate at the 3' end to produce RNA with a linear 3'-phosphate group., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0AUR1", "ec_number_list": [ { "id": "3.-.-.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.-.-.-", "type": "external" } ], "go_molecular_function": "GO:0000287 magnesium ion binding;GO:0003730 mRNA 3'-UTR binding;GO:0160272 RNA 2',3'-cyclic phosphatase activity;GO:0003824 catalytic activity", "go_cellular_component": "GO:0005759 mitochondrial matrix", "go_biological_process": "GO:0070935 3'-UTR-mediated mRNA stabilization", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q5RGT6-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q5XJS0-1", "uniprot_id": [ { "id": "MIGA1_DANRE", "url": "https://www.uniprot.org/uniprot/Q5XJS0", "type": "external" } ], "mass": 66925.0, "length": 595, "protein_name": "Mitoguardin 1", "gene_name": "miga1", "organism": "Zebrafish", "refseq_name": "mitoguardin 1", "refseq_ac": [ { "id": "NP_001006090", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001006090", "type": "external" } ], "gene_names_uniprotkb": "miga1; fam73a; zgc:101625", "gene_names_refseq": "fam73a; miga1; zgc:101625", "protein_names_uniprotkb": "Mitoguardin 1; Protein FAM73A", "protein_names_refseq": "family with sequence similarity 73, member A; mitoguardin 1; protein FAM73A", "tax_id": 7955, "disease": "", "pathway": " (dre:450070); (R-DRE-1483166)", "pathway_count": 2, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC083228.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC083228.1., [RefSeq]; Regulator of mitochondrial fusion: acts by forming homo- and heterodimers at the mitochondrial outer membrane and facilitating the formation of pld6/MitoPLD dimers. May act by regulating phospholipid metabolism via pld6/MitoPLD., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0042803 protein homodimerization activity;GO:0046982 protein heterodimerization activity", "go_cellular_component": "GO:0005741 mitochondrial outer membrane;GO:0005886 plasma membrane", "go_biological_process": "GO:0008053 mitochondrial fusion", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q5XJS0-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q503U0-1", "uniprot_id": [ { "id": "LMO3_DANRE", "url": "https://www.uniprot.org/uniprot/Q503U0", "type": "external" } ], "mass": 16608.0, "length": 145, "protein_name": "LIM domain only protein 3", "gene_name": "lmo3", "organism": "Zebrafish", "refseq_name": "LIM domain only protein 3 isoform 2", "refseq_ac": [ { "id": "NP_001018575", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001018575", "type": "external" } ], "gene_names_uniprotkb": "lmo3; LMO-3; lmo3b; zgc:110149", "gene_names_refseq": "LMO-3; lmo3b; lmo3; zgc:110149", "protein_names_uniprotkb": "LIM domain only protein 3; LMO-3", "protein_names_refseq": "LIM domain only protein 3 isoform 2; LIM domain only protein 3", "tax_id": 7955, "disease": "", "pathway": " (dre:553774)", "pathway_count": 1, "publication_count": 3, "publication_id_list": "18850331;27189481;29700229", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC095186.1, EH593361.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000004.1. Transcript Variant: This variant (2) differs in the 5' UTR and coding sequence compared to variant 1. The resulting isoform (2) is shorter at the N-terminus compared to isoform 1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0003713 transcription coactivator activity;GO:0046872 metal ion binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0045944 positive regulation of transcription by RNA polymerase II", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "Q503U0-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q503V3-1", "uniprot_id": [ { "id": "SPRNG_DANRE", "url": "https://www.uniprot.org/uniprot/Q503V3", "type": "external" } ], "mass": 22814.0, "length": 199, "protein_name": "SREBP regulating gene protein", "gene_name": "spring1; spring", "organism": "Zebrafish", "refseq_name": "SREBP regulating gene protein", "refseq_ac": [ { "id": "NP_001018573", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001018573", "type": "external" } ], "gene_names_uniprotkb": "spring1; spring; spring; zgc:110063", "gene_names_refseq": "spring1; spring; zgc:110063", "protein_names_uniprotkb": "SREBP regulating gene protein", "protein_names_refseq": "SREBP regulating gene protein; UPF0454 protein C12orf49 homolog", "tax_id": 7955, "disease": "", "pathway": " (dre:553772)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC095168.1, BC078336.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC095168.1., [RefSeq]; Positively regulates hepatic SREBP signaling pathway by modulating the proper localization of SCAP (SREBP cleavage-activating protein) to the endoplasmic reticulum, thereby controlling the level of functional SCAP., [UniProtKB, UniProtKB]", "predicted_glycosites": 1, "predicted_n_glycosites": 1, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0000139 Golgi membrane", "go_biological_process": "GO:0098856 intestinal lipid absorption;GO:2000640 positive regulation of SREBP signaling pathway", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q503V3-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000010000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q5SPP5-1", "uniprot_id": [ { "id": "EFR3B_DANRE", "url": "https://www.uniprot.org/uniprot/Q5SPP5", "type": "external" } ], "mass": 91960.0, "length": 816, "protein_name": "Protein EFR3 homolog B", "gene_name": "efr3bb; efr3b", "organism": "Zebrafish", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "efr3bb; efr3b; efr3b; si:ch211-203k16.1; si:ch211-215m21.18; si:dkeyp-70e6.6", "gene_names_refseq": "", "protein_names_uniprotkb": "Protein EFR3 homolog B", "protein_names_refseq": "", "tax_id": 7955, "disease": "", "pathway": " (dre:561353)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "23594743;26469318;27189481;28252024", "class_list": "", "function": "Component of a complex required to localize phosphatidylinositol 4-kinase (PI4K) to the plasma membrane. The complex acts as a regulator of phosphatidylinositol 4-phosphate (PtdIns(4)P) synthesis. In the complex, efr3b probably acts as the membrane-anchoring component., [UniProtKB, UniProtKB]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "GO:0072659 protein localization to plasma membrane;GO:0046854 phosphatidylinositol phosphate biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "Q5SPP5-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q5TKT3-1", "uniprot_id": [ { "id": "Q5TKT3_DANRE", "url": "https://www.uniprot.org/uniprot/Q5TKT3", "type": "external" } ], "mass": 15839.0, "length": 140, "protein_name": "Interleukin 17a/f2 precursor", "gene_name": "f2", "organism": "Zebrafish", "refseq_name": "interleukin 17a/f2 precursor", "refseq_ac": [ { "id": "NP_001018634", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001018634", "type": "external" } ], "gene_names_uniprotkb": "f2; il17-2", "gene_names_refseq": "il17-2; il17a/f2", "protein_names_uniprotkb": "Interleukin 17a/f2 precursor", "protein_names_refseq": "interleukin 17-2; interleukin 17a/f2 precursor", "tax_id": 7955, "disease": "colitis (Disease Ontology:DOID:0060180); ileitis (Disease Ontology:DOID:0060189); acute necrotizing pancreatitis (Disease Ontology:DOID:0080998); pleurisy (Disease Ontology:DOID:10247); lipoid nephrosis (Disease Ontology:DOID:10966); uveitis (Disease Ontology:DOID:13141); brain ischemia (Disease Ontology:DOID:2316); asthma (Disease Ontology:DOID:2841); chronic obstructive pulmonary disease (Disease Ontology:DOID:3083); periodontal disease (Disease Ontology:DOID:3388); plague (Disease Ontology:DOID:3482); pulmonary fibrosis (Disease Ontology:DOID:3770); anti-basement membrane glomerulonephritis (Disease Ontology:DOID:4780); myocardial infarction (Disease Ontology:DOID:5844); congestive heart failure (Disease Ontology:DOID:6000); myocarditis (Disease Ontology:DOID:820); periapical periodontitis (Disease Ontology:DOID:823); acute myocardial infarction (Disease Ontology:DOID:9408)", "pathway": " (dre:553970)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "16677828;19716422;24023910;24561130;26083432;28847848;30063756;32517017;32671088;34575763", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: CR927646.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN18715719, SAMN18715720 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AB195257.1. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 18, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1N6J3", "ec_number_list": [], "go_molecular_function": "GO:0005125 cytokine activity", "go_cellular_component": "GO:0005576 extracellular region", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "Q5TKT3-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q5RGE4-1", "uniprot_id": [ { "id": "MEIG1_DANRE", "url": "https://www.uniprot.org/uniprot/Q5RGE4", "type": "external" } ], "mass": 11249.0, "length": 92, "protein_name": "Meiosis expressed gene 1 protein homolog", "gene_name": "meig1", "organism": "Zebrafish", "refseq_name": "meiosis expressed gene 1 protein homolog", "refseq_ac": [ { "id": "NP_001013488", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001013488", "type": "external" } ], "gene_names_uniprotkb": "meig1; si:dkey-153k10.4; zgc:110359", "gene_names_refseq": "meig1; si:dkey-153k10.4; zgc:110359", "protein_names_uniprotkb": "Meiosis expressed gene 1 protein homolog", "protein_names_refseq": "meiosis expressed gene 1 homolog; meiosis expressed gene 1 protein homolog", "tax_id": 7955, "disease": "", "pathway": " (dre:541343)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "23594743", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC091461.1, CN019516.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC091461.1., [RefSeq]; Essential for spermiogenesis., [UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q5BJJ1", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0007283 spermatogenesis;GO:0030154 cell differentiation", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q5RGE4-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q5BJJ5-1", "uniprot_id": [ { "id": "HDHD2_DANRE", "url": "https://www.uniprot.org/uniprot/Q5BJJ5", "type": "external" } ], "mass": 28546.0, "length": 262, "protein_name": "Haloacid dehalogenase-like hydrolase domain-containing protein 2", "gene_name": "hdhd2", "organism": "Zebrafish", "refseq_name": "haloacid dehalogenase-like hydrolase domain-containing protein 2", "refseq_ac": [ { "id": "NP_001013491", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001013491", "type": "external" } ], "gene_names_uniprotkb": "hdhd2; zgc:110332", "gene_names_refseq": "hdhd2; zgc:110332", "protein_names_uniprotkb": "Haloacid dehalogenase-like hydrolase domain-containing protein 2", "protein_names_refseq": "haloacid dehalogenase-like hydrolase domain-containing protein 2", "tax_id": 7955, "disease": "", "pathway": " (dre:541346)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC091457.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC091457.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0046872 metal ion binding;GO:0016791 phosphatase activity", "go_cellular_component": "GO:0005737 cytoplasm", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q5BJJ5-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1RLU1-1", "uniprot_id": [ { "id": "BRAT1_DANRE", "url": "https://www.uniprot.org/uniprot/Q1RLU1", "type": "external" } ], "mass": 90626.0, "length": 822, "protein_name": "Integrator complex assembly factor BRAT1", "gene_name": "brat1", "organism": "Zebrafish", "refseq_name": "integrator complex assembly factor BRAT1", "refseq_ac": [ { "id": "NP_001035395", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001035395", "type": "external" } ], "gene_names_uniprotkb": "brat1; baat1; zgc:136845", "gene_names_refseq": "baat1; brat1; zgc:136845", "protein_names_uniprotkb": "Integrator complex assembly factor BRAT1; BRCA1-associated ATM activator 1; BRCA1-associated protein required for ATM activation protein 1", "protein_names_refseq": "BRCA1-associated protein required for ATM activation protein 1; HEAT repeat-containing protein C7orf27 homolog; integrator complex assembly factor BRAT1", "tax_id": 7955, "disease": "", "pathway": " (dre:678547)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC115289.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC115289.1., [RefSeq]; Component of a multiprotein complex required for the assembly of the RNA endonuclease module of the integrator complex (By similarity). Associates with ints9 and ints11 in the cytoplasm and blocks the active site of ints11 to inhibit the endonuclease activity of ints11 before formation of the full integrator complex (By similarity). Following dissociation of wdr73 of the complex, brat1 facilitates the nuclear import of the ints9-ints11 heterodimer (By similarity). In the nucleus, ints4 is integrated to the ints9-ints11 heterodimer and brat1 is released from the mature RNA endonuclease module by inositol hexakisphosphate (InsP6) (By similarity). Also involved in DNA damage response; activates kinases atm, smc1a and prkdc by modulating their phosphorylation status following ionizing radiation (IR) stress (By similarity)., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0046872 metal ion binding;GO:0008428 ribonuclease inhibitor activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm", "go_biological_process": "GO:0001934 positive regulation of protein phosphorylation;GO:0008283 cell population proliferation;GO:0006974 DNA damage response;GO:0010212 response to ionizing radiation;GO:0034504 protein localization to nucleus", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q1RLU1-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q5XJK9-1", "uniprot_id": [ { "id": "CMS1_DANRE", "url": "https://www.uniprot.org/uniprot/Q5XJK9", "type": "external" } ], "mass": 33046.0, "length": 291, "protein_name": "Protein CMSS1", "gene_name": "cmss1", "organism": "Zebrafish", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "cmss1; zgc:101814", "gene_names_refseq": "", "protein_names_uniprotkb": "Protein CMSS1; Cms1 ribosomal small subunit homolog", "protein_names_refseq": "", "tax_id": 7955, "disease": "", "pathway": " (dre:450027)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q5XJK9-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1LVS8-1", "uniprot_id": [ { "id": "SVOPL_DANRE", "url": "https://www.uniprot.org/uniprot/Q1LVS8", "type": "external" } ], "mass": 56552.0, "length": 506, "protein_name": "Putative transporter SVOPL", "gene_name": "svopl", "organism": "Zebrafish", "refseq_name": "putative transporter SVOPL", "refseq_ac": [ { "id": "NP_001007408", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001007408", "type": "external" } ], "gene_names_uniprotkb": "svopl; si:dkeyp-27e10.2; zgc:101741", "gene_names_refseq": "svopl; zgc:101741", "protein_names_uniprotkb": "Putative transporter SVOPL; SVOP-like protein", "protein_names_refseq": "SVOP-like protein; putative transporter SVOPL", "tax_id": 7955, "disease": "", "pathway": " (dre:492766)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "23594743", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC085429.1, GDQH01031408.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000004.1. On Oct 5, 2011 this sequence version replaced NP_001007408.1. Transcript Variant: This variant (2) differs in the 5' UTR compared to variant 1. Both variants 1 and 2 encode the same protein. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q5U3R1", "ec_number_list": [], "go_molecular_function": "GO:0022857 transmembrane transporter activity", "go_cellular_component": "GO:0016020 membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q1LVS8-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q56A36-1", "uniprot_id": [ { "id": "HSH2D_DANRE", "url": "https://www.uniprot.org/uniprot/Q56A36", "type": "external" } ], "mass": 41320.0, "length": 365, "protein_name": "Hematopoietic SH2 domain-containing protein homolog", "gene_name": "hsh2d", "organism": "Zebrafish", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "hsh2d; wu:fk78a10; zgc:113273", "gene_names_refseq": "", "protein_names_uniprotkb": "Hematopoietic SH2 domain-containing protein homolog", "protein_names_refseq": "", "tax_id": 7955, "disease": "", "pathway": " (dre:548337); (R-DRE-4420097)", "pathway_count": 2, "publication_count": 1, "publication_id_list": "24683187", "class_list": "", "function": "May be an adapter protein involved in tyrosine kinase signaling., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0030674 protein-macromolecule adaptor activity", "go_cellular_component": "GO:0005737 cytoplasm", "go_biological_process": "GO:0007165 signal transduction;GO:0042110 T cell activation", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q56A36-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q504F3-1", "uniprot_id": [ { "id": "R9BP_DANRE", "url": "https://www.uniprot.org/uniprot/Q504F3", "type": "external" } ], "mass": 27721.0, "length": 245, "protein_name": "Regulator of G protein signaling 9-binding protein", "gene_name": "rgs9bp", "organism": "Zebrafish", "refseq_name": "regulator of G-protein signaling 9-binding protein", "refseq_ac": [ { "id": "NP_001018364", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001018364", "type": "external" } ], "gene_names_uniprotkb": "rgs9bp; zgc:109913", "gene_names_refseq": "rgs9bp; zgc:109913", "protein_names_uniprotkb": "Regulator of G protein signaling 9-binding protein; RGS9-anchoring protein", "protein_names_refseq": "RGS9-anchoring protein; regulator of G-protein signaling 9-binding protein", "tax_id": 7955, "disease": "", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC095048.1, CN015113.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505389, SAMEA3505392 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC095048.1., [RefSeq]; Regulator of G protein-coupled receptor (GPCR) signaling. Probably acts by regulating the activity of some 'R7' family protein (RGS6, RGS7, RGS9 and/or RGS11)., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0043005 neuron projection", "go_biological_process": "GO:0007186 G protein-coupled receptor signaling pathway;GO:0009968 negative regulation of signal transduction", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q504F3-1", "record_type": "protein", "filter_code": "0000000.0000000.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q568M3-1", "uniprot_id": [ { "id": "CRLF3_DANRE", "url": "https://www.uniprot.org/uniprot/Q568M3", "type": "external" } ], "mass": 49267.0, "length": 444, "protein_name": "Cytokine receptor-like factor 3", "gene_name": "crlf3", "organism": "Zebrafish", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "crlf3; clf-3; fd20c08; id:ibd2508; im:7137736; wu:fd20c08; zgc:110212", "gene_names_refseq": "", "protein_names_uniprotkb": "Cytokine receptor-like factor 3; Clf-3 protein", "protein_names_refseq": "", "tax_id": 7955, "disease": "", "pathway": " (dre:550515)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "11731487;17640376;26469318;31680844;35795682;40044042", "class_list": "", "function": "May play a role in the negative regulation of cell cycle progression., [UniProtKB, UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 1, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 1, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 1, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 1, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 0, "biomarker_type": "", "glycan_count": 1, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A8Y6W7;Q5BLI0", "ec_number_list": [], "go_molecular_function": "GO:0003677 DNA binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "Q568M3-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0100000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1LY80-1", "uniprot_id": [ { "id": "T120B_DANRE", "url": "https://www.uniprot.org/uniprot/Q1LY80", "type": "external" } ], "mass": 40058.0, "length": 337, "protein_name": "Transmembrane protein 120B", "gene_name": "tmem120b", "organism": "Zebrafish", "refseq_name": "transmembrane protein 120B isoform X1", "refseq_ac": [ { "id": "XP_005169279", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005169279", "type": "external" } ], "gene_names_uniprotkb": "tmem120b; si:dkey-237o15.3; zgc:110614", "gene_names_refseq": "tmem120b; zgc:110614", "protein_names_uniprotkb": "Transmembrane protein 120B", "protein_names_refseq": "transmembrane protein 120B isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:798580)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "23594743;27106595", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133185) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]; Necessary for efficient adipogenesis. Does not show ion channel activity., [UniProtKB, UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q503G6", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0016020 membrane;GO:0005637 nuclear inner membrane", "go_biological_process": "GO:0045444 fat cell differentiation", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "Q1LY80-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1LVE8-1", "uniprot_id": [ { "id": "SF3B3_DANRE", "url": "https://www.uniprot.org/uniprot/Q1LVE8", "type": "external" } ], "mass": 135622.0, "length": 1217, "protein_name": "Splicing factor 3B subunit 3", "gene_name": "sf3b3", "organism": "Zebrafish", "refseq_name": "splicing factor 3B subunit 3", "refseq_ac": [ { "id": "NP_998668", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_998668", "type": "external" } ], "gene_names_uniprotkb": "sf3b3; zgc:55440", "gene_names_refseq": "ik:tdsubc_2b2; sf3b3; wu:fb81f05; xx:tdsubc_2b2; zgc:55440", "protein_names_uniprotkb": "Splicing factor 3B subunit 3", "protein_names_refseq": "splicing factor 3B subunit 3", "tax_id": 7955, "disease": "", "pathway": " (dre:406824); (R-DRE-72165); (R-DRE-9770562); (R-DRE-9943411)", "pathway_count": 4, "publication_count": 1, "publication_id_list": "23594743", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC047171.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC047171.1., [RefSeq]; Component of the 17S U2 SnRNP complex of the spliceosome, a large ribonucleoprotein complex that removes introns from transcribed pre-mRNAs. The 17S U2 SnRNP complex (1) directly participates in early spliceosome assembly and (2) mediates recognition of the intron branch site during pre-mRNA splicing by promoting the selection of the pre-mRNA branch-site adenosine, the nucleophile for the first step of splicing. Within the 17S U2 SnRNP complex, SF3B3 is part of the SF3B subcomplex, which is required for 'A' complex assembly formed by the stable binding of U2 snRNP to the branchpoint sequence in pre-mRNA. Also acts as a component of the minor spliceosome, which is involved in the splicing of U12-type introns in pre-mRNAs., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q802W7", "ec_number_list": [], "go_molecular_function": "GO:0030620 U2 snRNA binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005686 U2 snRNP;GO:0005684 U2-type spliceosomal complex;GO:0071005 U2-type precatalytic spliceosome", "go_biological_process": "GO:0000398 mRNA splicing, via spliceosome", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q1LVE8-1", "record_type": "protein", "filter_code": "0000000.0000101.010000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1LVI4-1", "uniprot_id": [ { "id": "Q1LVI4_DANRE", "url": "https://www.uniprot.org/uniprot/Q1LVI4", "type": "external" } ], "mass": 44790.0, "length": 398, "protein_name": "Cyclin-P", "gene_name": "ccnp", "organism": "Zebrafish", "refseq_name": "cyclin-P", "refseq_ac": [ { "id": "NP_001038424", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001038424", "type": "external" } ], "gene_names_uniprotkb": "ccnp; cntd2; fd19c03; si:ch211-132b12.8; wu:fd19c03; wu:fi23b01", "gene_names_refseq": "ccnp; cntd2; fd19c03; si:ch211-132b12.8; wu:fd19c03; wu:fi23b01", "protein_names_uniprotkb": "Cyclin-P", "protein_names_refseq": "cyclin N-terminal domain containing 2; cyclin-P", "tax_id": 7955, "disease": "", "pathway": " (dre:561391)", "pathway_count": 1, "publication_count": 3, "publication_id_list": "12234666;19092113;29149642", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC142772.1, GFIL01035514.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA898399, SAMEA898400 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000018.1. On or before Sep 1, 2006 this sequence version replaced XP_707670.1, XP_684827.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1N9Q0", "ec_number_list": [], "go_molecular_function": "GO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0000307 cyclin-dependent protein kinase holoenzyme complex", "go_biological_process": "GO:0000082 G1/S transition of mitotic cell cycle", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "Q1LVI4-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1LVI6-1", "uniprot_id": [ { "id": "Q1LVI6_DANRE", "url": "https://www.uniprot.org/uniprot/Q1LVI6", "type": "external" } ], "mass": 65098.0, "length": 577, "protein_name": "Transporter", "gene_name": "si:ch211-132b12.6", "organism": "Zebrafish", "refseq_name": "si:ch211-132b12.6", "refseq_ac": [ { "id": "NP_001038523", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001038523", "type": "external" } ], "gene_names_uniprotkb": "si:ch211-132b12.6; zgc:174946", "gene_names_refseq": "si:ch211-132b12.6; zgc:174946", "protein_names_uniprotkb": "Transporter", "protein_names_refseq": "si:ch211-132b12.6", "tax_id": 7955, "disease": "", "pathway": " (dre:564583); (R-DRE-352230); (R-DRE-442660); (R-DRE-888593)", "pathway_count": 4, "publication_count": 2, "publication_id_list": "12477932;27189481", "class_list": "", "function": "VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000018.1. On or before Jul 21, 2025 this sequence version replaced XP_073785351.1, NP_001108196.1, XP_693005.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8N1TQ25;A0AC58HTN2", "ec_number_list": [], "go_molecular_function": "GO:0005332 gamma-aminobutyric acid:sodium:chloride symporter activity;GO:0046872 metal ion binding", "go_cellular_component": "GO:0005886 plasma membrane;GO:0042995 cell projection", "go_biological_process": "GO:0006865 amino acid transport;GO:0035725 sodium ion transmembrane transport", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "Q1LVI6-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1LVI7-1", "uniprot_id": [ { "id": "Q1LVI7_DANRE", "url": "https://www.uniprot.org/uniprot/Q1LVI7", "type": "external" } ], "mass": 65326.0, "length": 579, "protein_name": "Transporter", "gene_name": "si:ch211-132b12.5; zgc:158427", "organism": "Zebrafish", "refseq_name": "uncharacterized protein LOC790932", "refseq_ac": [ { "id": "NP_001073546", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001073546", "type": "external" } ], "gene_names_uniprotkb": "si:ch211-132b12.5; zgc:158427; si:ch211-132b12.5; zgc:158427", "gene_names_refseq": "si:ch211-132b12.5; zgc:158427", "protein_names_uniprotkb": "Transporter", "protein_names_refseq": "uncharacterized protein LOC790932", "tax_id": 7955, "disease": "", "pathway": " (dre:790932); (R-DRE-352230); (R-DRE-442660); (R-DRE-888593)", "pathway_count": 4, "publication_count": 1, "publication_id_list": "27189481", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC116618.1, SRR32588714.659006.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN18715698, SAMN18715699 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000018.1. On or before Sep 11, 2023 this sequence version replaced XP_017207457.1, NP_001073546.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M6Z2M4", "ec_number_list": [], "go_molecular_function": "GO:0005332 gamma-aminobutyric acid:sodium:chloride symporter activity;GO:0046872 metal ion binding", "go_cellular_component": "GO:0005886 plasma membrane;GO:0042995 cell projection", "go_biological_process": "GO:0006865 amino acid transport;GO:0035725 sodium ion transmembrane transport", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q1LVI7-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1LVI9-1", "uniprot_id": [ { "id": "Q1LVI9_DANRE", "url": "https://www.uniprot.org/uniprot/Q1LVI9", "type": "external" } ], "mass": 64993.0, "length": 577, "protein_name": "Transporter", "gene_name": "si:ch211-132b12.3", "organism": "Zebrafish", "refseq_name": "uncharacterized protein LOC100002232", "refseq_ac": [ { "id": "NP_001076419", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001076419", "type": "external" } ], "gene_names_uniprotkb": "si:ch211-132b12.3", "gene_names_refseq": "si:ch211-132b12.3", "protein_names_uniprotkb": "Transporter", "protein_names_refseq": "uncharacterized protein LOC100002232", "tax_id": 7955, "disease": "", "pathway": " (dre:100002232); (R-DRE-352230); (R-DRE-442660); (R-DRE-888593)", "pathway_count": 4, "publication_count": 1, "publication_id_list": "21873635", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: SRR32588727.1119468.1, SRR32588728.24250125.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505375, SAMEA3505385 [ECO:0006172] ##Evidence-Data-END## PREDICTED REFSEQ: This record has not been reviewed and the function is unknown. The reference sequence was derived from JBMGRA010000018.1. On Mar 15, 2007 this sequence version replaced XP_001337970.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NDI0", "ec_number_list": [], "go_molecular_function": "GO:0005332 gamma-aminobutyric acid:sodium:chloride symporter activity;GO:0046872 metal ion binding", "go_cellular_component": "GO:0005886 plasma membrane;GO:0042995 cell projection", "go_biological_process": "GO:0006865 amino acid transport;GO:0035725 sodium ion transmembrane transport", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q1LVI9-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1LVJ0-1", "uniprot_id": [ { "id": "Q1LVJ0_DANRE", "url": "https://www.uniprot.org/uniprot/Q1LVJ0", "type": "external" } ], "mass": 65547.0, "length": 582, "protein_name": "Transporter", "gene_name": "si:ch211-132b12.2", "organism": "Zebrafish", "refseq_name": "uncharacterized protein LOC571877", "refseq_ac": [ { "id": "NP_001038688", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001038688", "type": "external" } ], "gene_names_uniprotkb": "si:ch211-132b12.2", "gene_names_refseq": "si:ch211-132b12.2", "protein_names_uniprotkb": "Transporter", "protein_names_refseq": "uncharacterized protein LOC571877", "tax_id": 7955, "disease": "", "pathway": " (dre:571877); (R-DRE-352230); (R-DRE-442660); (R-DRE-888593)", "pathway_count": 4, "publication_count": 2, "publication_id_list": "26469318;28252024", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: SRR32588727.1729795.1, SRR32588728.16363358.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA898403, SAMN06350654 [ECO:0000348] ##Evidence-Data-END## PREDICTED REFSEQ: This record has not been reviewed and the function is unknown. The reference sequence was derived from JBMGRA010000018.1. On Sep 1, 2006 this sequence version replaced XP_700608.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8N7UYB8", "ec_number_list": [], "go_molecular_function": "GO:0005332 gamma-aminobutyric acid:sodium:chloride symporter activity;GO:0046872 metal ion binding", "go_cellular_component": "GO:0005886 plasma membrane;GO:0042995 cell projection", "go_biological_process": "GO:0006865 amino acid transport;GO:0035725 sodium ion transmembrane transport", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "Q1LVJ0-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1LVK4-1", "uniprot_id": [ { "id": "Q1LVK4_DANRE", "url": "https://www.uniprot.org/uniprot/Q1LVK4", "type": "external" } ], "mass": 41886.0, "length": 379, "protein_name": "Forkhead box protein G1", "gene_name": "foxg1c", "organism": "Zebrafish", "refseq_name": "forkhead box protein G1c", "refseq_ac": [ { "id": "NP_001038680", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001038680", "type": "external" } ], "gene_names_uniprotkb": "foxg1c; si:ch211-202c21.4", "gene_names_refseq": "foxg1c; si:ch211-202c21.4", "protein_names_uniprotkb": "Forkhead box protein G1", "protein_names_refseq": "forkhead box protein G1c", "tax_id": 7955, "disease": "", "pathway": " (dre:571323)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "19379839;25937343;29695303;31917260;33609461;33742663", "class_list": "", "function": "PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000018.1. On Jun 5, 2025 this sequence version replaced NP_001038680.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NA92", "ec_number_list": [], "go_molecular_function": "GO:0003700 DNA-binding transcription factor activity;GO:1990837 sequence-specific double-stranded DNA binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006357 regulation of transcription by RNA polymerase II", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q1LVK4-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1LVP9-1", "uniprot_id": [ { "id": "Q1LVP9_DANRE", "url": "https://www.uniprot.org/uniprot/Q1LVP9", "type": "external" } ], "mass": 60942.0, "length": 546, "protein_name": "Heparanase", "gene_name": "hpse", "organism": "Zebrafish", "refseq_name": "heparanase precursor", "refseq_ac": [ { "id": "NP_001038470", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001038470", "type": "external" } ], "gene_names_uniprotkb": "hpse; im:7144134", "gene_names_refseq": "hpse; im:7144134", "protein_names_uniprotkb": "Heparanase; 3.2.1.166", "protein_names_refseq": "heparanase precursor", "tax_id": 7955, "disease": "", "pathway": " (dre:563020); (R-DRE-2024096); (R-DRE-6798695)", "pathway_count": 3, "publication_count": 10, "publication_id_list": "23306105;23499292;24130815;24416389;24629592;30418535;31269749;32131390;32570707;33377648", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC139574.1, GDQQ01008559.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000021.1. On Jun 7, 2025 this sequence version replaced NP_001038470.1. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1N9R1", "ec_number_list": [ { "id": "3.1.3.48", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.48", "type": "external" }, { "id": "1.8.3.2", "url": "https://www.rhea-db.org/rhea/?query=ec:1.8.3.2", "type": "external" }, { "id": "2.7.1.35", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.35", "type": "external" }, { "id": "3.5.3.1", "url": "https://www.rhea-db.org/rhea/?query=ec:3.5.3.1", "type": "external" }, { "id": "3.4.24.7", "url": "https://www.rhea-db.org/rhea/?query=ec:3.4.24.7", "type": "external" }, { "id": "3.2.1.166", "url": "https://www.rhea-db.org/rhea/?query=ec:3.2.1.166", "type": "external" }, { "id": "3.5.1.3", "url": "https://www.rhea-db.org/rhea/?query=ec:3.5.1.3", "type": "external" } ], "go_molecular_function": "GO:0016798 hydrolase activity, acting on glycosyl bonds", "go_cellular_component": "GO:0005615 extracellular space;GO:0016020 membrane;GO:0031012 extracellular matrix", "go_biological_process": "GO:0007160 cell-matrix adhesion;GO:0060055 angiogenesis involved in wound healing", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "Q1LVP9-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1LVQ4-1", "uniprot_id": [ { "id": "Q1LVQ4_DANRE", "url": "https://www.uniprot.org/uniprot/Q1LVQ4", "type": "external" } ], "mass": 82681.0, "length": 741, "protein_name": "Transporter", "gene_name": "slc6a15", "organism": "Zebrafish", "refseq_name": "sodium-dependent neutral amino acid transporter B(0)AT2", "refseq_ac": [ { "id": "NP_001232001", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001232001", "type": "external" } ], "gene_names_uniprotkb": "slc6a15; si:ch211-154h20.4", "gene_names_refseq": "si:ch211-154h20.4; slc6a15", "protein_names_uniprotkb": "Transporter", "protein_names_refseq": "sodium-dependent neutral amino acid transporter B(0)AT2-like; sodium-dependent neutral amino acid transporter B(0)AT2; solute carrier family 6 (neutral amino acid transporter), member 15", "tax_id": 7955, "disease": "", "pathway": " (R-DRE-352230); (R-DRE-442660)", "pathway_count": 2, "publication_count": 3, "publication_id_list": "27189481;28252024;32064511", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GFIL01038819.1, SRR32588727.714589.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000018.1. On or before May 31, 2014 this sequence version replaced NP_001232000.1, XP_005159175.1, XP_693685.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1P414;A0AC58HTS4", "ec_number_list": [], "go_molecular_function": "GO:0005298 proline:sodium symporter activity;GO:0046872 metal ion binding", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "GO:0015820 L-leucine transport;GO:0035725 sodium ion transmembrane transport", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "Q1LVQ4-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1LVS6-1", "uniprot_id": [ { "id": "Q1LVS6_DANRE", "url": "https://www.uniprot.org/uniprot/Q1LVS6", "type": "external" } ], "mass": 52574.0, "length": 446, "protein_name": "Protein mono-ADP-ribosyltransferase PARP12b", "gene_name": "parp12b", "organism": "Zebrafish", "refseq_name": "protein mono-ADP-ribosyltransferase PARP12b", "refseq_ac": [ { "id": "NP_001108558", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001108558", "type": "external" } ], "gene_names_uniprotkb": "parp12b; fc13d08; fj90e08; si:dkeyp-27e10.4; wu:fc13d08; wu:fj90e08; zgc:110593", "gene_names_refseq": "fc13d08; fj90e08; parp12b; si:dkeyp-27e10.4; wu:fc13d08; wu:fj90e08; zgc:110593", "protein_names_uniprotkb": "Protein mono-ADP-ribosyltransferase PARP12b", "protein_names_refseq": "protein mono-ADP-ribosyltransferase PARP12b", "tax_id": 7955, "disease": "", "pathway": " (dre:553633)", "pathway_count": 1, "publication_count": 3, "publication_id_list": "24683187;25601102;33901262", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GFIL01029494.1, BC095326.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000004.1. On Mar 14, 2009 this sequence version replaced NP_001018442.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NHX3", "ec_number_list": [], "go_molecular_function": "GO:1990404 NAD+-protein mono-ADP-ribosyltransferase activity;GO:0008270 zinc ion binding;GO:0003950 NAD+ poly-ADP-ribosyltransferase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm", "go_biological_process": "GO:0070213 protein auto-ADP-ribosylation", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "Q1LVS6-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1LW07-1", "uniprot_id": [ { "id": "Q1LW07_DANRE", "url": "https://www.uniprot.org/uniprot/Q1LW07", "type": "external" } ], "mass": 41866.0, "length": 361, "protein_name": "Guanine nucleotide binding protein (G protein), alpha 15 (Gq class), tandem duplicate 4", "gene_name": "gna15.4", "organism": "Zebrafish", "refseq_name": "guanine nucleotide binding protein (G protein), alpha 15 (Gq class), tandem duplicate 4", "refseq_ac": [ { "id": "NP_001038454", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001038454", "type": "external" } ], "gene_names_uniprotkb": "gna15.4; si:ch211-207c7.1", "gene_names_refseq": "gna15.4; si:ch211-207c7.1", "protein_names_uniprotkb": "Guanine nucleotide binding protein (G protein), alpha 15 (Gq class), tandem duplicate 4", "protein_names_refseq": "Galpha 15d; gna15d; guanine nucleotide binding protein (G protein), alpha 15 (Gq class), tandem duplicate 4; guanine nucleotide binding protein (G protein), alpha 15.4 (Gq class)", "tax_id": 7955, "disease": "", "pathway": " (dre:562625)", "pathway_count": 1, "publication_count": 3, "publication_id_list": "19164534;21242316;26469318", "class_list": "", "function": "##Evidence-Data-START## RNAseq introns :: partial sample support SAMEA4476781, SAMN18715720 [ECO:0000350] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000022.1. On Sep 1, 2006 this sequence version replaced XP_691097.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1N9Q6", "ec_number_list": [], "go_molecular_function": "GO:0003924 GTPase activity;GO:0005525 GTP binding;GO:0046872 metal ion binding;GO:0001664 G protein-coupled receptor binding;GO:0031683 G-protein beta/gamma-subunit complex binding", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005834 heterotrimeric G-protein complex", "go_biological_process": "GO:0060158 phospholipase C-activating dopamine receptor signaling pathway;GO:0001508 action potential;GO:0007188 adenylate cyclase-modulating G protein-coupled receptor signaling pathway", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "Q1LW07-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1LW50-1", "uniprot_id": [ { "id": "Q1LW50_DANRE", "url": "https://www.uniprot.org/uniprot/Q1LW50", "type": "external" } ], "mass": 36503.0, "length": 320, "protein_name": "Zinc finger protein 1174", "gene_name": "znf1174", "organism": "Zebrafish", "refseq_name": "zinc finger protein 1174", "refseq_ac": [ { "id": "NP_001076567", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001076567", "type": "external" } ], "gene_names_uniprotkb": "znf1174; si:dkey-15h8.7", "gene_names_refseq": "si:dkey-15h8.7; znf1174", "protein_names_uniprotkb": "Zinc finger protein 1174", "protein_names_refseq": "zinc finger protein 1174", "tax_id": 7955, "disease": "", "pathway": " (dre:100034622)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "12477932;21873635", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: EH498439.1, CN020611.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN18715721 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000022.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NDR1", "ec_number_list": [], "go_molecular_function": "GO:0008270 zinc ion binding;GO:0000977 RNA polymerase II transcription regulatory region sequence-specific DNA binding;GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006357 regulation of transcription by RNA polymerase II", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "Q1LW50-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1LWC6-1", "uniprot_id": [ { "id": "Q1LWC6_DANRE", "url": "https://www.uniprot.org/uniprot/Q1LWC6", "type": "external" } ], "mass": 22454.0, "length": 195, "protein_name": "dihydrofolate reductase", "gene_name": "zgc:153031", "organism": "Zebrafish", "refseq_name": "zgc:153031", "refseq_ac": [ { "id": "NP_001038295", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001038295", "type": "external" } ], "gene_names_uniprotkb": "zgc:153031", "gene_names_refseq": "zgc:153031", "protein_names_uniprotkb": "dihydrofolate reductase; 1.5.1.3", "protein_names_refseq": "zgc:153031", "tax_id": 7955, "disease": "cancer (Disease Ontology:DOID:162); acute lymphoblastic leukemia (Disease Ontology:DOID:9952)", "pathway": " (dre:557552)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "26469318;27189481;35134499;35886872", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC124219.1, EH451610.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC124219.1. On Sep 1, 2006 this sequence version replaced XP_685730.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 2, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0004146 dihydrofolate reductase activity;GO:0050661 NADP binding", "go_cellular_component": "GO:0005739 mitochondrion", "go_biological_process": "GO:0046654 tetrahydrofolate biosynthetic process;GO:0006730 one-carbon metabolic process;GO:0046655 folic acid metabolic process;GO:0046452 dihydrofolate metabolic process", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "Q1LWC6-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1LWC9-1", "uniprot_id": [ { "id": "Q1LWC9_DANRE", "url": "https://www.uniprot.org/uniprot/Q1LWC9", "type": "external" } ], "mass": 48021.0, "length": 420, "protein_name": "Sulfotransferase", "gene_name": "si:ch73-62b13.1", "organism": "Zebrafish", "refseq_name": "Carbohydrate sulfotransferase 1-like precursor", "refseq_ac": [ { "id": "NP_001076420", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001076420", "type": "external" } ], "gene_names_uniprotkb": "si:ch73-62b13.1; si:dkey-227k11.1", "gene_names_refseq": "si:ch73-62b13.1; si:dkey-227k11.1", "protein_names_uniprotkb": "Sulfotransferase; 2.8.2.-", "protein_names_refseq": "Carbohydrate sulfotransferase 1-like precursor", "tax_id": 7955, "disease": "", "pathway": " (dre:100002270)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "21873635", "class_list": "", "function": "##Evidence-Data-START## RNAseq introns :: single sample supports all introns SAMEA3505376, SAMEA3505378 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BX571971.4. On Mar 15, 2007 this sequence version replaced XP_001342096.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q1LWD3", "ec_number_list": [], "go_molecular_function": "GO:0001517 N-acetylglucosamine 6-O-sulfotransferase activity", "go_cellular_component": "GO:0000139 Golgi membrane", "go_biological_process": "GO:0006044 N-acetylglucosamine metabolic process;GO:0005975 carbohydrate metabolic process;GO:0006790 sulfur compound metabolic process", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q1LWC9-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1LWF1-1", "uniprot_id": [ { "id": "Q1LWF1_DANRE", "url": "https://www.uniprot.org/uniprot/Q1LWF1", "type": "external" } ], "mass": 48643.0, "length": 418, "protein_name": "Ethanolamine kinase", "gene_name": "chka", "organism": "Zebrafish", "refseq_name": "choline kinase alpha isoform X1", "refseq_ac": [ { "id": "XP_005159162", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005159162", "type": "external" } ], "gene_names_uniprotkb": "chka; im:7143625; si:dkey-12e7.3; wu:fd46h01", "gene_names_refseq": "chka; im:7143625; si:dkey-12e7.3; wu:fd46h01", "protein_names_uniprotkb": "Ethanolamine kinase; 2.7.1.32; 2.7.1.82", "protein_names_refseq": "choline kinase alpha isoform X1", "tax_id": 7955, "disease": "colon adenoma (Disease Ontology:DOID:0050912)", "pathway": " (dre:558499); (R-DRE-1483191); (R-DRE-1483213)", "pathway_count": 3, "publication_count": 4, "publication_id_list": "15520368;23919627;29339408;34119630", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133193) annotated using gene prediction method: Gnomon, supported by mRNA evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M2B5P0", "ec_number_list": [ { "id": "2.7.1.32", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.32", "type": "external" }, { "id": "2.7.1.82", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.82", "type": "external" } ], "go_molecular_function": "GO:0005524 ATP binding;GO:0004103 choline kinase activity;GO:0004305 ethanolamine kinase activity;GO:0016301 kinase activity", "go_cellular_component": "GO:0005737 cytoplasm", "go_biological_process": "GO:0006657 CDP-choline pathway;GO:0006646 phosphatidylethanolamine biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "Q1LWF1-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1LWG1-1", "uniprot_id": [ { "id": "Q1LWG1_DANRE", "url": "https://www.uniprot.org/uniprot/Q1LWG1", "type": "external" } ], "mass": 49625.0, "length": 439, "protein_name": "Iroquois-class homeodomain protein IRX-4b", "gene_name": "irx4b", "organism": "Zebrafish", "refseq_name": "iroquois-class homeodomain protein IRX-4b", "refseq_ac": [ { "id": "NP_001018329", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001018329", "type": "external" } ], "gene_names_uniprotkb": "irx4b; ziro4b", "gene_names_refseq": "irx4b; ziro4b", "protein_names_uniprotkb": "Iroquois-class homeodomain protein IRX-4b", "protein_names_refseq": "iroquois homeobox protein 4b; iroquois-class homeodomain protein IRX-4b", "tax_id": 7955, "disease": "", "pathway": " (dre:474318)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "15064948;15133664;16217788;20408909;26982811;31943068;34338288;37272628;38181896", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: SRR32588732.3352770.1, SRR32588722.46080363.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505376, SAMEA3505385 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000019.1. On or before Feb 12, 2016 this sequence version replaced XP_009292486.1, NP_001018329.1. Sequence Note: This RefSeq record was created from genomic sequence data because no single transcript from the reference strain was available for the full length of the gene. The extent of this transcript is supported by transcript alignments, RNA-seq data and orthologous data., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1N5Z0", "ec_number_list": [], "go_molecular_function": "GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding;GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006357 regulation of transcription by RNA polymerase II;GO:0030182 neuron differentiation;GO:0048468 cell development", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "Q1LWG1-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1LWG3-1", "uniprot_id": [ { "id": "RM36_DANRE", "url": "https://www.uniprot.org/uniprot/Q1LWG3", "type": "external" } ], "mass": 12944.0, "length": 116, "protein_name": "Large ribosomal subunit protein bL36m", "gene_name": "mrpl36", "organism": "Zebrafish", "refseq_name": "large ribosomal subunit protein bL36m", "refseq_ac": [ { "id": "NP_001092727", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001092727", "type": "external" } ], "gene_names_uniprotkb": "mrpl36; si:dkey-261i16.3", "gene_names_refseq": "mrpl36; si:dkey-261i16.3", "protein_names_uniprotkb": "Large ribosomal subunit protein bL36m; 39S ribosomal protein L36, mitochondrial; L36mt; MRP-L36", "protein_names_refseq": "39S ribosomal protein L36, mitochondrial; L36mt; MRP-L36; large ribosomal subunit protein bL36m", "tax_id": 7955, "disease": "", "pathway": " (dre:100093703); (R-DRE-5389840); (R-DRE-5419276); (R-DRE-9937383)", "pathway_count": 4, "publication_count": 1, "publication_id_list": "23594743", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC142854.1, EH538051.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## ##RefSeq-Attributes-START## gene product(s) localized to mito. :: inferred from homology ##RefSeq-Attributes-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC142854.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A5PLD3", "ec_number_list": [], "go_molecular_function": "GO:0003735 structural constituent of ribosome", "go_cellular_component": "GO:0005762 mitochondrial large ribosomal subunit", "go_biological_process": "GO:0006412 translation", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q1LWG3-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1LWK5-1", "uniprot_id": [ { "id": "Q1LWK5_DANRE", "url": "https://www.uniprot.org/uniprot/Q1LWK5", "type": "external" } ], "mass": 57220.0, "length": 518, "protein_name": "Integrator complex subunit 14", "gene_name": "ints14", "organism": "Zebrafish", "refseq_name": "integrator complex subunit 14 isoform X1", "refseq_ac": [ { "id": "XP_005159109", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005159109", "type": "external" } ], "gene_names_uniprotkb": "ints14; fi19c12; vwa9; wu:fi19c12; zgc:55794", "gene_names_refseq": "fi19c12; ints14; vwa9; wu:fi19c12; zgc:55794", "protein_names_uniprotkb": "Integrator complex subunit 14; von Willebrand factor A domain-containing protein 9", "protein_names_refseq": "integrator complex subunit 14 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (R-DRE-6807505)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133193) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M2B5I4", "ec_number_list": [], "go_molecular_function": "GO:0046872 metal ion binding", "go_cellular_component": "GO:0032039 integrator complex", "go_biological_process": "GO:0034472 snRNA 3'-end processing", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q1LWK5-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1LWL1-1", "uniprot_id": [ { "id": "Q1LWL1_DANRE", "url": "https://www.uniprot.org/uniprot/Q1LWL1", "type": "external" } ], "mass": 89243.0, "length": 772, "protein_name": "Kinesin-associated protein 3b", "gene_name": "kifap3b", "organism": "Zebrafish", "refseq_name": "kinesin-associated protein 3b", "refseq_ac": [ { "id": "NP_001137517", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001137517", "type": "external" } ], "gene_names_uniprotkb": "kifap3b; fb99h08; kifap3; wu:fb99h08; wz7228", "gene_names_refseq": "fb99h08; kifap3b; kifap3; wu:fb99h08; wz7228", "protein_names_uniprotkb": "Kinesin-associated protein 3b", "protein_names_refseq": "kinesin-associated protein 3b; kinesin-associated protein 3", "tax_id": 7955, "disease": "", "pathway": " (dre:561489)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "12036288;26469318;27903883;34534441", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GFIL01014015.1, SRR32588720.2203175.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000002.1. On Mar 11, 2009 this sequence version replaced XP_689982.2. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NQZ7", "ec_number_list": [], "go_molecular_function": "GO:0019894 kinesin binding", "go_cellular_component": "GO:0005930 axoneme;GO:0016939 kinesin II complex;GO:0035869 ciliary transition zone", "go_biological_process": "GO:0007018 microtubule-based movement;GO:0048513 animal organ development;GO:0044782 cilium organization", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "Q1LWL1-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1LWL7-1", "uniprot_id": [ { "id": "Q1LWL7_DANRE", "url": "https://www.uniprot.org/uniprot/Q1LWL7", "type": "external" } ], "mass": 50610.0, "length": 447, "protein_name": "tRNA dimethylallyltransferase", "gene_name": "trit1", "organism": "Zebrafish", "refseq_name": "tRNA dimethylallyltransferase", "refseq_ac": [ { "id": "NP_001038239", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001038239", "type": "external" } ], "gene_names_uniprotkb": "trit1; si:ch211-194e15.1", "gene_names_refseq": "si:ch211-194e15.1; trit1", "protein_names_uniprotkb": "tRNA dimethylallyltransferase; 2.5.1.75", "protein_names_refseq": "tRNA dimethylallyltransferase", "tax_id": 7955, "disease": "combined oxidative phosphorylation deficiency 35 (Disease Ontology:DOID:0111464); lung cancer (Disease Ontology:DOID:1324)", "pathway": " (dre:553523)", "pathway_count": 1, "publication_count": 3, "publication_id_list": "25556858;27189481;29354154", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GFIL01042024.1, GDQH01006677.1 [ECO:0000332] RNAseq introns :: partial sample support SAMEA3505393, SAMEA4476731 [ECO:0000350] ##Evidence-Data-END## ##RefSeq-Attributes-START## gene product(s) localized to mito. :: inferred from homology ##RefSeq-Attributes-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000019.1. On Jun 5, 2025 this sequence version replaced NP_001038239.1., [RefSeq]; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 of both cytosolic and mitochondrial tRNAs, leading to the formation of N6-(dimethylallyl)adenosine (i6A37). Mediates modification of a limited subset of tRNAs: tRNA(Ser)(AGA), tRNA(Ser)(CGA), tRNA(Ser)(UGA), as well as partial modification of the selenocysteine tRNA(Ser)(UCA). TRIT1 is therefore required for selenoprotein expression., [UniProtKB, UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 2, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1N9A5;F1Q4Z4", "ec_number_list": [ { "id": "2.5.1.75", "url": "https://www.rhea-db.org/rhea/?query=ec:2.5.1.75", "type": "external" } ], "go_molecular_function": "GO:0005524 ATP binding;GO:0008270 zinc ion binding;GO:0052381 tRNA dimethylallyltransferase activity", "go_cellular_component": "GO:0005739 mitochondrion", "go_biological_process": "GO:0006400 tRNA modification", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "Q1LWL7-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1LWL8-1", "uniprot_id": [ { "id": "MCL1B_DANRE", "url": "https://www.uniprot.org/uniprot/Q1LWL8", "type": "external" } ], "mass": 45646.0, "length": 404, "protein_name": "Protein L-Myc-1b", "gene_name": "mycl1b", "organism": "Zebrafish", "refseq_name": "protein L-Myc-1b", "refseq_ac": [ { "id": "NP_001038607", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001038607", "type": "external" } ], "gene_names_uniprotkb": "mycl1b; si:ch211-194e15.2; zgc:152988", "gene_names_refseq": "fi04c04; mycl1b; myclb; si:ch211-194e15.2; wu:fa07c04; wu:fb19f03; wu:fi04c04; zgc:152988", "protein_names_uniprotkb": "Protein L-Myc-1b", "protein_names_refseq": "V-Myc1; protein L-Myc-1b; v-myc avian myelocytomatosis viral oncogene lung carcinoma derived homolog b; v-myc myelocytomatosis viral oncogene homolog 1, lung carcinoma derived b", "tax_id": 7955, "disease": "", "pathway": " (dre:567762)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "23594743", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GFIL01027365.1, BC124204.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505383, SAMN01765705 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000019.1. On Sep 1, 2006 this sequence version replaced XP_696155.1. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0046983 protein dimerization activity;GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding;GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006357 regulation of transcription by RNA polymerase II;GO:0002244 hematopoietic progenitor cell differentiation", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q1LWL8-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1LWV0-1", "uniprot_id": [ { "id": "Q1LWV0_DANRE", "url": "https://www.uniprot.org/uniprot/Q1LWV0", "type": "external" } ], "mass": 43674.0, "length": 392, "protein_name": "Glutaminyl-peptide cyclotransferase", "gene_name": "qpctla", "organism": "Zebrafish", "refseq_name": "glutaminyl-peptide cyclotransferase-like a", "refseq_ac": [ { "id": "NP_001038418", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001038418", "type": "external" } ], "gene_names_uniprotkb": "qpctla; fb71g05; si:dkey-149j18.2; wu:fb71g05", "gene_names_refseq": "fb71g05; qpctla; si:dkey-149j18.2; wu:fb71g05", "protein_names_uniprotkb": "Glutaminyl-peptide cyclotransferase; 2.3.2.5; Glutaminyl cyclase; Glutaminyl-tRNA cyclotransferase", "protein_names_refseq": "glutaminyl-peptide cyclotransferase-like a", "tax_id": 7955, "disease": "", "pathway": " (dre:561142)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "25848931;26469318;27189481;31053140;36077499", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC134852.1, GFIL01031973.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505372, SAMEA3505376 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000018.1. On Sep 1, 2006 this sequence version replaced XP_689638.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8N1YWZ0", "ec_number_list": [ { "id": "2.3.2.5", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.2.5", "type": "external" } ], "go_molecular_function": "GO:0008270 zinc ion binding;GO:0016603 glutaminyl-peptide cyclotransferase activity", "go_cellular_component": "GO:0005576 extracellular region", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q1LWV0-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1LWW7-1", "uniprot_id": [ { "id": "Q1LWW7_DANRE", "url": "https://www.uniprot.org/uniprot/Q1LWW7", "type": "external" } ], "mass": 49416.0, "length": 433, "protein_name": "Bone morphogenetic protein 8A precursor", "gene_name": "bmp8a", "organism": "Zebrafish", "refseq_name": "bone morphogenetic protein 8A precursor", "refseq_ac": [ { "id": "NP_001038436", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001038436", "type": "external" } ], "gene_names_uniprotkb": "bmp8a; bmp8", "gene_names_refseq": "bmp8a; bmp8", "protein_names_uniprotkb": "Bone morphogenetic protein 8A precursor", "protein_names_refseq": "bone morphogenetic protein 8A precursor; bone morphogenetic protein 8", "tax_id": 7955, "disease": "", "pathway": " (dre:561963)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "17205186;20463905;24561038;28536466;28627438;33750893;36979489;37553521", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GDQQ01008959.1, GFIL01002438.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA708836, SAMEA898401 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000019.1. On Sep 1, 2006 this sequence version replaced XP_690451.1., [RefSeq]; Bmp8a deletion leads to obesity through regulation of lipid metabolism and adipocyte differentiation. Publication Status: Online-Only, [RefSeq, PubMed]; Bmp8a is an essential positive regulator of antiviral immunity in zebrafish. Publication Status: Online-Only, [RefSeq, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8N7V0N2", "ec_number_list": [], "go_molecular_function": "GO:0005125 cytokine activity;GO:0008083 growth factor activity", "go_cellular_component": "GO:0005615 extracellular space", "go_biological_process": "GO:0006629 lipid metabolic process;GO:0030154 cell differentiation;GO:0030509 BMP signaling pathway;GO:0002230 positive regulation of defense response to virus by host;GO:0001503 ossification", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "Q1LWW7-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1LWX1-1", "uniprot_id": [ { "id": "Q1LWX1_DANRE", "url": "https://www.uniprot.org/uniprot/Q1LWX1", "type": "external" } ], "mass": 29215.0, "length": 255, "protein_name": "Uncharacterized protein LOC560783", "gene_name": "si:rp71-45k5.2", "organism": "Zebrafish", "refseq_name": "uncharacterized protein LOC560783", "refseq_ac": [ { "id": "NP_001038405", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001038405", "type": "external" } ], "gene_names_uniprotkb": "si:rp71-45k5.2", "gene_names_refseq": "si:rp71-45k5.2", "protein_names_uniprotkb": "Uncharacterized protein LOC560783", "protein_names_refseq": "uncharacterized protein LOC560783", "tax_id": 7955, "disease": "", "pathway": " (dre:560783)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "21873635", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: EH568324.1, EH547190.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA898399, SAMEA898400 [ECO:0000348] ##Evidence-Data-END## PREDICTED REFSEQ: This record has not been reviewed and the function is unknown. The reference sequence was derived from JBMGRA010000019.1. On Sep 1, 2006 this sequence version replaced XP_689273.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1N9M6", "ec_number_list": [], "go_molecular_function": "GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding;GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006357 regulation of transcription by RNA polymerase II;GO:0030154 cell differentiation;GO:0009888 tissue development;GO:0009653 anatomical structure morphogenesis", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q1LWX1-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1LX17-1", "uniprot_id": [ { "id": "Q1LX17_DANRE", "url": "https://www.uniprot.org/uniprot/Q1LX17", "type": "external" } ], "mass": 9403.0, "length": 78, "protein_name": "Cyclin-dependent kinases regulatory subunit", "gene_name": "cks2", "organism": "Zebrafish", "refseq_name": "cyclin-dependent kinases regulatory subunit 2", "refseq_ac": [ { "id": "NP_001038434", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001038434", "type": "external" } ], "gene_names_uniprotkb": "cks2; si:dkey-94n12.2", "gene_names_refseq": "cks2; si:dkey-94n12.2", "protein_names_uniprotkb": "Cyclin-dependent kinases regulatory subunit", "protein_names_refseq": "cyclin-dependent kinases regulatory subunit 2", "tax_id": 7955, "disease": "", "pathway": " (dre:561930)", "pathway_count": 1, "publication_count": 3, "publication_id_list": "12234666;23000964;27189481", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GDQH01016937.1, EH593928.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000022.1. On or before Sep 1, 2006 this sequence version replaced XP_685460.1, XP_707977.1., [RefSeq]; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function., [UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1N9P3", "ec_number_list": [], "go_molecular_function": "GO:0019901 protein kinase binding;GO:0042393 histone binding;GO:0043130 ubiquitin binding;GO:0061575 cyclin-dependent protein serine/threonine kinase activator activity", "go_cellular_component": "GO:0019005 SCF ubiquitin ligase complex;GO:0000307 cyclin-dependent protein kinase holoenzyme complex", "go_biological_process": "GO:0051301 cell division;GO:0007346 regulation of mitotic cell cycle", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "Q1LX17-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1LX49-1", "uniprot_id": [ { "id": "DEN11_DANRE", "url": "https://www.uniprot.org/uniprot/Q1LX49", "type": "external" } ], "mass": 54831.0, "length": 490, "protein_name": "DENN domain-containing protein 11", "gene_name": "dennd11", "organism": "Zebrafish", "refseq_name": "DENN domain-containing protein 11", "refseq_ac": [ { "id": "NP_001037812", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001037812", "type": "external" } ], "gene_names_uniprotkb": "dennd11; lchn; si:ch211-238n5.4", "gene_names_refseq": "LCHN; dennd11; si:ch211-238n5.4; wu:fa55h08", "protein_names_uniprotkb": "DENN domain-containing protein 11; DENND11; Protein LCHN", "protein_names_refseq": "DENN domain-containing protein 11; protein LCHN", "tax_id": 7955, "disease": "", "pathway": " (dre:556432)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "23594743", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: SRR32588715.1967254.1, SRR32588714.22994812.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000018.1. On Aug 25, 2006 this sequence version replaced XP_684340.1., [RefSeq]; Probable guanine nucleotide exchange factor (GEF). May promote the exchange of GDP to GTP, converting inactive GDP-bound small GTPases into their active GTP-bound form., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0005085 guanyl-nucleotide exchange factor activity", "go_cellular_component": "GO:0005737 cytoplasm", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q1LX49-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1LX61-1", "uniprot_id": [ { "id": "Q1LX61_DANRE", "url": "https://www.uniprot.org/uniprot/Q1LX61", "type": "external" } ], "mass": 47662.0, "length": 418, "protein_name": "Proline-serine-threonine phosphatase-interacting protein 1", "gene_name": "pstpip1a", "organism": "Zebrafish", "refseq_name": "proline-serine-threonine phosphatase-interacting protein 1a", "refseq_ac": [ { "id": "NP_001038681", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001038681", "type": "external" } ], "gene_names_uniprotkb": "pstpip1a; si:dkey-24l11.5", "gene_names_refseq": "pstpip1a; si:dkey-24l11.5", "protein_names_uniprotkb": "Proline-serine-threonine phosphatase-interacting protein 1", "protein_names_refseq": "proline-serine-threonine phosphatase-interacting protein 1a", "tax_id": 7955, "disease": "autoinflammatory syndrome with cytopenia, hyperzincemia, and hypercalprotectinemia (Disease Ontology:DOID:0061185); PAPA syndrome (Disease Ontology:DOID:0080519)", "pathway": " (dre:571331); (R-DRE-844456)", "pathway_count": 2, "publication_count": 1, "publication_id_list": "28789986", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GFIL01031660.1, GDQH01021153.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505375 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000018.1. On Sep 1, 2006 this sequence version replaced XP_700002.1., [RefSeq]; Involved in regulation of the actin cytoskeleton. May regulate WAS actin-bundling activity. Bridges the interaction between ABL1 and PTPN18 leading to ABL1 dephosphorylation. May play a role as a scaffold protein between PTPN12 and WAS and allow PTPN12 to dephosphorylate WAS. Has the potential to physically couple CD2 and CD2AP to WAS. Acts downstream of CD2 and CD2AP to recruit WAS to the T-cell:APC contact site so as to promote the actin polymerization required for synapse induction during T-cell activation. Down-regulates CD2-stimulated adhesion through the coupling of PTPN12 to CD2. Also has a role in innate immunity and the inflammatory response. Recruited to inflammasomes by MEFV. Induces formation of pyroptosomes, large supramolecular structures composed of oligomerized PYCARD dimers which form prior to inflammatory apoptosis. Binding to MEFV allows MEFV to bind to PYCARD and facilitates pyroptosome formation. Regulates endocytosis and cell migration in neutrophils., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 2, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NA82", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005856 cytoskeleton;GO:0005886 plasma membrane;GO:0030027 lamellipodium;GO:0048471 perinuclear region of cytoplasm", "go_biological_process": "GO:0006897 endocytosis;GO:0006954 inflammatory response;GO:0007155 cell adhesion;GO:0045087 innate immune response", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q1LX61-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1LX92-1", "uniprot_id": [ { "id": "Q1LX92_DANRE", "url": "https://www.uniprot.org/uniprot/Q1LX92", "type": "external" } ], "mass": 30722.0, "length": 280, "protein_name": "Uncharacterized protein LOC563551; Uncharacterized protein isoform X1", "gene_name": "asb13a.2", "organism": "Zebrafish", "refseq_name": "uncharacterized protein LOC563551", "refseq_ac": [ { "id": "NP_001119582", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001119582", "type": "external" } ], "gene_names_uniprotkb": "asb13a.2; si:dkey-108d22.2", "gene_names_refseq": "asb13a.2; si:dkey-108d22.2", "protein_names_uniprotkb": "Uncharacterized protein LOC563551; Uncharacterized protein isoform X1", "protein_names_refseq": "uncharacterized protein LOC563551", "tax_id": 7955, "disease": "", "pathway": " (dre:563551)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "27189481", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC153988.1, SRR32588722.16034692.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA898400, SAMN08196787 [ECO:0000348] ##Evidence-Data-END## PREDICTED REFSEQ: This record has not been reviewed and the function is unknown. The reference sequence was derived from JBMGRA010000004.1. On Jul 31, 2008 this sequence version replaced XP_692009.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8N7UYY1;A0AC58J7H9", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "GO:0035556 intracellular signal transduction;GO:0016567 protein ubiquitination", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q1LX92-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1LXA7-1", "uniprot_id": [ { "id": "Q1LXA7_DANRE", "url": "https://www.uniprot.org/uniprot/Q1LXA7", "type": "external" } ], "mass": 42308.0, "length": 370, "protein_name": "Asporin", "gene_name": "aspn", "organism": "Zebrafish", "refseq_name": "asporin precursor", "refseq_ac": [ { "id": "NP_571788", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_571788", "type": "external" } ], "gene_names_uniprotkb": "aspn; aspnl; bgl3; wu:fk08c11; zgc:109936", "gene_names_refseq": "aspnl; aspn; bgl3; wu:fk08c11; zgc:109936", "protein_names_uniprotkb": "Asporin", "protein_names_refseq": "asporin precursor; biglycan-like protein 3", "tax_id": 7955, "disease": "ankylosing spondylitis (Disease Ontology:DOID:7147); osteoarthritis (Disease Ontology:DOID:8398); degenerative disc disease (Disease Ontology:DOID:90)", "pathway": " (dre:65228)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "15376328;19482995;26469318;27189481;30579210;33412105;37884489", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC095063.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from EE689153.1, EE697401.1 and BC078368.1. On May 23, 2007 this sequence version replaced NP_571788.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 3, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1P6K1", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005615 extracellular space", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q1LXA7-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1LXB0-1", "uniprot_id": [ { "id": "Q1LXB0_DANRE", "url": "https://www.uniprot.org/uniprot/Q1LXB0", "type": "external" } ], "mass": 17073.0, "length": 151, "protein_name": "Uncharacterized protein LOC492503", "gene_name": "si:dkey-42i9.4", "organism": "Zebrafish", "refseq_name": "uncharacterized protein LOC492503", "refseq_ac": [ { "id": "NP_001007376", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001007376", "type": "external" } ], "gene_names_uniprotkb": "si:dkey-42i9.4; fb11a09; wu:fb11a09; zgc:101883", "gene_names_refseq": "fb11a09; si:dkey-42i9.4; wu:fb11a09; zgc:101883", "protein_names_uniprotkb": "Uncharacterized protein LOC492503", "protein_names_refseq": "B-cell translocation gene 1-like; uncharacterized protein LOC492503", "tax_id": 7955, "disease": "", "pathway": " (dre:492503)", "pathway_count": 1, "publication_count": 3, "publication_id_list": "12234666;26469318;27189481", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC085463.1, EH581823.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN01765705 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from CO922212.1, EH581823.1 and BC085463.1. On Jul 31, 2008 this sequence version replaced NP_001007376.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1N306", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm", "go_biological_process": "GO:0008285 negative regulation of cell population proliferation", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "Q1LXB0-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1LXE6-1", "uniprot_id": [ { "id": "TT39C_DANRE", "url": "https://www.uniprot.org/uniprot/Q1LXE6", "type": "external" } ], "mass": 65173.0, "length": 579, "protein_name": "Tetratricopeptide repeat protein 39C", "gene_name": "ttc39c", "organism": "Zebrafish", "refseq_name": "tetratricopeptide repeat protein 39C", "refseq_ac": [ { "id": "NP_001018404", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001018404", "type": "external" } ], "gene_names_uniprotkb": "ttc39c; si:ch73-264b7.2", "gene_names_refseq": "si:ch73-264b7.2; si:dkey-121a11.7; ttc39c; zgc:110162", "protein_names_uniprotkb": "Tetratricopeptide repeat protein 39C; TPR repeat protein 39C", "protein_names_refseq": "TPR repeat protein 39C; tetratricopeptide repeat protein 39C", "tax_id": 7955, "disease": "", "pathway": " (dre:553591)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "23594743", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GDQH01011532.1, GFIL01042205.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505375 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000022.1. On or before Jun 25, 2015 this sequence version replaced XP_005161764.1, NP_001018404.2. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q503T7", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "GO:0032474 otolith morphogenesis;GO:0060271 cilium assembly;GO:0061371 determination of heart left/right asymmetry", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q1LXE6-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1LXI5-1", "uniprot_id": [ { "id": "RM54_DANRE", "url": "https://www.uniprot.org/uniprot/Q1LXI5", "type": "external" } ], "mass": 15830.0, "length": 135, "protein_name": "Large ribosomal subunit protein mL54", "gene_name": "mrpl54", "organism": "Zebrafish", "refseq_name": "large ribosomal subunit protein mL54", "refseq_ac": [ { "id": "NP_001333205", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001333205", "type": "external" } ], "gene_names_uniprotkb": "mrpl54; si:dkeyp-70f9.5", "gene_names_refseq": "L54mt; MRP-L54; mrpl54; si:dkeyp-70f9.5", "protein_names_uniprotkb": "Large ribosomal subunit protein mL54; 39S ribosomal protein L54, mitochondrial; L54mt; MRP-L54", "protein_names_refseq": "39S ribosomal protein L54, mitochondrial; large ribosomal subunit protein mL54", "tax_id": 7955, "disease": "", "pathway": " (dre:100034614); (R-DRE-5389840); (R-DRE-5419276); (R-DRE-9937383)", "pathway_count": 4, "publication_count": 1, "publication_id_list": "23594743", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: EH547618.1, EH563651.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA4476743 [ECO:0000348] ##Evidence-Data-END## ##RefSeq-Attributes-START## gene product(s) localized to mito. :: inferred from homology ##RefSeq-Attributes-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from EH563651.1, EH553151.1 and EH486297.1. On Oct 4, 2016 this sequence version replaced XP_003201071.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0003735 structural constituent of ribosome", "go_cellular_component": "GO:0005762 mitochondrial large ribosomal subunit", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q1LXI5-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1LXJ9-1", "uniprot_id": [ { "id": "Q1LXJ9_DANRE", "url": "https://www.uniprot.org/uniprot/Q1LXJ9", "type": "external" } ], "mass": 49934.0, "length": 473, "protein_name": "Keratin, type 1, 19e", "gene_name": "krt1-19e", "organism": "Zebrafish", "refseq_name": "keratin, type 1, 19e", "refseq_ac": [ { "id": "NP_001107814", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001107814", "type": "external" } ], "gene_names_uniprotkb": "krt1-19e; im:6905469; krtt1c19e; si:dkeyp-113d7.4", "gene_names_refseq": "im:6905469; krt1-19e; krtt1c19e; si:dkeyp-113d7.4", "protein_names_uniprotkb": "Keratin, type 1, 19e", "protein_names_refseq": "keratin type 1 c19e; keratin, type 1, 19e; keratin-like", "tax_id": 7955, "disease": "", "pathway": " (dre:553371); (R-DRE-6805567); (R-DRE-6809371)", "pathway_count": 3, "publication_count": 10, "publication_id_list": "16297574;22062151;23400780;24400120;24415949;34991727;35134499;36388116;36551948;37528073", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC116529.1, BC092980.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505377, SAMEA3505378 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC116529.1. On Feb 8, 2008 this sequence version replaced XP_001342839.1. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NFX8", "ec_number_list": [], "go_molecular_function": "GO:0030280 structural constituent of skin epidermis", "go_cellular_component": "GO:0005856 cytoskeleton;GO:0045095 keratin filament", "go_biological_process": "GO:0002009 morphogenesis of an epithelium", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "Q1LXJ9-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1LXL6-1", "uniprot_id": [ { "id": "Q1LXL6_DANRE", "url": "https://www.uniprot.org/uniprot/Q1LXL6", "type": "external" } ], "mass": 50758.0, "length": 458, "protein_name": "Serine incorporator 2 precursor", "gene_name": "serinc2", "organism": "Zebrafish", "refseq_name": "serine incorporator 2", "refseq_ac": [ { "id": "NP_001038647", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001038647", "type": "external" } ], "gene_names_uniprotkb": "serinc2; im:7151765; si:ch211-232d9.2", "gene_names_refseq": "im:7151765; serinc2; si:ch211-232d9.2", "protein_names_uniprotkb": "Serine incorporator 2 precursor", "protein_names_refseq": "serine incorporator 2", "tax_id": 7955, "disease": "", "pathway": " (dre:569338); (R-DRE-977347)", "pathway_count": 2, "publication_count": 5, "publication_id_list": "19184727;19240133;20463905;26469318;32541022", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GFIL01034865.1, GDQH01005181.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505373, SAMEA3505377 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000019.1. On Sep 1, 2006 this sequence version replaced XP_697810.1., [RefSeq]", "predicted_glycosites": 2, "predicted_n_glycosites": 0, "predicted_o_glycosites": 2, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 2, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NA28", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0016020 membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q1LXL6-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1LXR3-1", "uniprot_id": [ { "id": "Q1LXR3_DANRE", "url": "https://www.uniprot.org/uniprot/Q1LXR3", "type": "external" } ], "mass": 109546.0, "length": 978, "protein_name": "Ribosome-binding protein 1b", "gene_name": "rrbp1b", "organism": "Zebrafish", "refseq_name": "ribosome-binding protein 1b", "refseq_ac": [ { "id": "NP_955463", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_955463", "type": "external" } ], "gene_names_uniprotkb": "rrbp1b; rrbp1; sb:cb489; wu:fc47a01", "gene_names_refseq": "rrbp1b; rrbp1; sb:cb489; wu:fc47a01", "protein_names_uniprotkb": "Ribosome-binding protein 1b", "protein_names_refseq": "ribosome binding protein 1 homolog 180kDa (dog); ribosome binding protein 1 homolog b (dog); ribosome-binding protein 1b", "tax_id": 7955, "disease": "", "pathway": "", "pathway_count": 0, "publication_count": 9, "publication_id_list": "12234666;14718378;15520368;16109975;18339436;25692557;27189481;28252024;33251495", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GFIL01034089.1, AY398408.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000022.1. On Jun 25, 2025 this sequence version replaced NP_955463.2. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1PCX5", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005789 endoplasmic reticulum membrane", "go_biological_process": "GO:0015031 protein transport", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "Q1LXR3-1", "record_type": "protein", "filter_code": "0000000.0000100.010000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1LXS2-1", "uniprot_id": [ { "id": "PSMG2_DANRE", "url": "https://www.uniprot.org/uniprot/Q1LXS2", "type": "external" } ], "mass": 28960.0, "length": 260, "protein_name": "Proteasome assembly chaperone 2", "gene_name": "psmg2", "organism": "Zebrafish", "refseq_name": "proteasome assembly chaperone 2", "refseq_ac": [ { "id": "NP_998197", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_998197", "type": "external" } ], "gene_names_uniprotkb": "psmg2; si:dkey-263o22.1; tnfsf5ip1; wu:fb51b11; zgc:73278", "gene_names_refseq": "psmg2; tnfsf5ip1; wu:fb51b11; zgc:73278", "protein_names_uniprotkb": "Proteasome assembly chaperone 2; Tumor necrosis factor superfamily member 5-induced protein 1 homolog", "protein_names_refseq": "proteasome assembly chaperone 2; tumor necrosis factor superfamily member 5-induced protein 1 homolog; tumor necrosis factor superfamily, member 5-induced protein 1", "tax_id": 7955, "disease": "proteosome-associated autoinflammatory syndrome 4 (Disease Ontology:DOID:0060915)", "pathway": " (dre:573107); (R-DRE-9907900)", "pathway_count": 2, "publication_count": 2, "publication_id_list": "23594743;40044042", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: CK026279.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC059607.1. On or before Sep 1, 2006 this sequence version replaced XP_689201.1, XP_689565.1, XP_690046.1., [RefSeq]; Chaperone protein which promotes assembly of the 20S proteasome as part of a heterodimer with psmg1., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 1, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 1, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 1, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 1, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 0, "biomarker_type": "", "glycan_count": 1, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q6PBR9", "ec_number_list": [], "go_molecular_function": "GO:0060090 molecular adaptor activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005829 cytosol;GO:0000502 proteasome complex", "go_biological_process": "GO:0043248 proteasome assembly;GO:0051131 chaperone-mediated protein complex assembly", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "Q1LXS2-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0100000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1LXU2-1", "uniprot_id": [ { "id": "Q1LXU2_DANRE", "url": "https://www.uniprot.org/uniprot/Q1LXU2", "type": "external" } ], "mass": 65557.0, "length": 691, "protein_name": "Collagen alpha-2(IX) chain precursor", "gene_name": "col9a2", "organism": "Zebrafish", "refseq_name": "collagen alpha-2(IX) chain precursor", "refseq_ac": [ { "id": "NP_997744", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_997744", "type": "external" } ], "gene_names_uniprotkb": "col9a2; cb343; colIXa2; sb:cb343; wu:fa12h02; wu:fc93e05; zgc:100808", "gene_names_refseq": "cb343; col9a2; colIXa2; sb:cb343; wu:fa12h02; wu:fc93e05; zgc:100808", "protein_names_uniprotkb": "Collagen alpha-2(IX) chain precursor", "protein_names_refseq": "collagen alpha-2(IX) chain precursor", "tax_id": 7955, "disease": "multiple epiphyseal dysplasia 2 (Disease Ontology:DOID:0070298); Stickler syndrome (Disease Ontology:DOID:0080046); osteochondrodysplasia (Disease Ontology:DOID:2256)", "pathway": " (dre:321212); (R-DRE-1650814); (R-DRE-8948216)", "pathway_count": 3, "publication_count": 10, "publication_id_list": "14718378;16109975;17251491;20335443;20836130;32134197;32958954;36346812;36458546;36659403", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: AY113700.1, GDQH01006251.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000019.1. On Oct 21, 2015 this sequence version replaced NP_997744.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications., [RefSeq]", "predicted_glycosites": 2, "predicted_n_glycosites": 0, "predicted_o_glycosites": 2, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 3, "glyco_site_count": 2, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1PHJ8", "ec_number_list": [], "go_molecular_function": "GO:0030020 extracellular matrix structural constituent conferring tensile strength", "go_cellular_component": "GO:0031012 extracellular matrix", "go_biological_process": "GO:0030198 extracellular matrix organization", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "Q1LXU2-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1LXV8-1", "uniprot_id": [ { "id": "TLCD5_DANRE", "url": "https://www.uniprot.org/uniprot/Q1LXV8", "type": "external" } ], "mass": 27305.0, "length": 242, "protein_name": "TLC domain-containing protein 5", "gene_name": "tlcd5", "organism": "Zebrafish", "refseq_name": "TLC domain-containing protein 5", "refseq_ac": [ { "id": "NP_001002701", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001002701", "type": "external" } ], "gene_names_uniprotkb": "tlcd5; si:dkey-70k11.2; tmem136; zgc:92621", "gene_names_refseq": "tlcd5b; tlcd5; tmem136b; tmem136; zgc:92621", "protein_names_uniprotkb": "TLC domain-containing protein 5; Transmembrane protein 136", "protein_names_refseq": "TLC domain-containing protein 5; transmembrane protein 136b; transmembrane protein 136", "tax_id": 7955, "disease": "", "pathway": " (dre:436974)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "23594743", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC076110.1, CF550028.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA4476739 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC076110.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q6DH71", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0016020 membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q1LXV8-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1LXW3-1", "uniprot_id": [ { "id": "Q1LXW3_DANRE", "url": "https://www.uniprot.org/uniprot/Q1LXW3", "type": "external" } ], "mass": 39301.0, "length": 358, "protein_name": "Circadian associated repressor of transcription a", "gene_name": "ciarta", "organism": "Zebrafish", "refseq_name": "circadian associated repressor of transcription a", "refseq_ac": [ { "id": "NP_001314827", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001314827", "type": "external" } ], "gene_names_uniprotkb": "ciarta; C1orf51; chrono; ciart; fk65b05; si:ch211-284a13.1; wu:fk65b05", "gene_names_refseq": "C1orf51; chrono; ciarta; ciart; fk65b05; si:ch211-284a13.1; wu:fk65b05", "protein_names_uniprotkb": "Circadian associated repressor of transcription a", "protein_names_refseq": "circadian associated repressor of transcription a", "tax_id": 7955, "disease": "", "pathway": " (dre:564009)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "26161812;26227973;26469318;26899944;28381614;33508534;33752003;35867745;35886843;37107331", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GDQH01001721.1, GDQQ01011253.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000019.1. On May 27, 2016 this sequence version replaced XP_001923101.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1P362", "ec_number_list": [], "go_molecular_function": "GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0045892 negative regulation of DNA-templated transcription;GO:0032922 circadian regulation of gene expression", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "Q1LXW3-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1LY17-1", "uniprot_id": [ { "id": "Q1LY17_DANRE", "url": "https://www.uniprot.org/uniprot/Q1LY17", "type": "external" } ], "mass": 95643.0, "length": 835, "protein_name": "Nucleolar MIF4G domain-containing protein 1", "gene_name": "nom1", "organism": "Zebrafish", "refseq_name": "nucleolar MIF4G domain-containing protein 1 isoform 1", "refseq_ac": [ { "id": "NP_001314989", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001314989", "type": "external" } ], "gene_names_uniprotkb": "nom1; si:ch211-266o5.1", "gene_names_refseq": "nom1; si:ch211-266o5.1", "protein_names_uniprotkb": "Nucleolar MIF4G domain-containing protein 1; SGD1 homolog", "protein_names_refseq": "nucleolar MIF4G domain-containing protein 1 isoform 1", "tax_id": 7955, "disease": "", "pathway": " (dre:557585)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "24967912;27189481", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: SRR26395062.249056.1, GDQQ01017815.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000007.1. On Jun 13, 2025 this sequence version replaced NP_001314989.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]; A new mechanism involving Nom1 in controlling vertebrate exocrine pancreas formation Publication Status: Online-Only, [RefSeq, PubMed]; Plays a role in targeting PPP1CA to the nucleolus., [UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1P9G3", "ec_number_list": [], "go_molecular_function": "GO:0003723 RNA binding", "go_cellular_component": "GO:0005730 nucleolus", "go_biological_process": "GO:0042254 ribosome biogenesis;GO:0042274 ribosomal small subunit biogenesis", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "Q1LY17-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1LY19-1", "uniprot_id": [ { "id": "Q1LY19_DANRE", "url": "https://www.uniprot.org/uniprot/Q1LY19", "type": "external" } ], "mass": 123695.0, "length": 1081, "protein_name": "Ubiquitin-protein ligase E3C", "gene_name": "ube3c", "organism": "Zebrafish", "refseq_name": "ubiquitin-protein ligase E3C", "refseq_ac": [ { "id": "NP_956767", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_956767", "type": "external" } ], "gene_names_uniprotkb": "ube3c; zgc:63649", "gene_names_refseq": "ube3c; zgc:63649", "protein_names_uniprotkb": "Ubiquitin-protein ligase E3C; 2.3.2.26; HECT-type ubiquitin transferase E3C; RTA-associated ubiquitin ligase", "protein_names_refseq": "ubiquitin-protein ligase E3C", "tax_id": 7955, "disease": "", "pathway": " (dre:393445); (R-DRE-983168)", "pathway_count": 2, "publication_count": 1, "publication_id_list": "15520368", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GDQH01009552.1, GFIL01042577.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000007.1. On or before Jun 16, 2016 this sequence version replaced XP_005166483.1, NP_956767.1. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1PCX7", "ec_number_list": [ { "id": "2.3.2.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.2.-", "type": "external" }, { "id": "2.3.2.27", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.2.27", "type": "external" }, { "id": "3.6.4.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.4.-", "type": "external" }, { "id": "2.3.2.34", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.2.34", "type": "external" }, { "id": "2.3.2.26", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.2.26", "type": "external" }, { "id": "6.2.1.45", "url": "https://www.rhea-db.org/rhea/?query=ec:6.2.1.45", "type": "external" }, { "id": "2.3.2.31", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.2.31", "type": "external" }, { "id": "2.3.2.23", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.2.23", "type": "external" }, { "id": "3.4.19.12", "url": "https://www.rhea-db.org/rhea/?query=ec:3.4.19.12", "type": "external" }, { "id": "2.3.2.25", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.2.25", "type": "external" } ], "go_molecular_function": "GO:0061630 ubiquitin protein ligase activity;GO:0016874 ligase activity", "go_cellular_component": "", "go_biological_process": "GO:0000209 protein polyubiquitination;GO:0006511 ubiquitin-dependent protein catabolic process", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q1LY19-1", "record_type": "protein", "filter_code": "0000000.0000101.010000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1LY51-1", "uniprot_id": [ { "id": "ZN704_DANRE", "url": "https://www.uniprot.org/uniprot/Q1LY51", "type": "external" } ], "mass": 54294.0, "length": 501, "protein_name": "Zinc finger protein 704", "gene_name": "znf704", "organism": "Zebrafish", "refseq_name": "zinc finger protein 704", "refseq_ac": [ { "id": "NP_001038383", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001038383", "type": "external" } ], "gene_names_uniprotkb": "znf704; si:ch211-203l9.2; si:ch211-203l9.3; si:ch211-203l9", "gene_names_refseq": "si:ch211-203l9.2; si:ch211-203l9.3; si:ch211-203l9.; znf704", "protein_names_uniprotkb": "Zinc finger protein 704", "protein_names_refseq": "zinc finger protein 704", "tax_id": 7955, "disease": "", "pathway": " (dre:560056)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "23594743", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC171645.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505373 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC134085.1, BI881870.1 and BC171645.1. On May 8, 2009 this sequence version replaced NP_001038383.1., [RefSeq]; Transcription factor., [UniProtKB, UniProtKB]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0003700 DNA-binding transcription factor activity;GO:0008270 zinc ion binding;GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006357 regulation of transcription by RNA polymerase II", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q1LY51-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1LY89-1", "uniprot_id": [ { "id": "Q1LY89_DANRE", "url": "https://www.uniprot.org/uniprot/Q1LY89", "type": "external" } ], "mass": 21436.0, "length": 191, "protein_name": "Rho-related GTP-binding protein RhoG", "gene_name": "rhoga", "organism": "Zebrafish", "refseq_name": "ras homolog family member Ga", "refseq_ac": [ { "id": "NP_001076273", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001076273", "type": "external" } ], "gene_names_uniprotkb": "rhoga; si:dkey-24p1.4", "gene_names_refseq": "rhoga; si:dkey-24p1.4", "protein_names_uniprotkb": "Rho-related GTP-binding protein RhoG", "protein_names_refseq": "ras homolog family member Ga; ras homolog gene family, member Ga", "tax_id": 7955, "disease": "epilepsy (Disease Ontology:DOID:1826)", "pathway": " (dre:556424)", "pathway_count": 1, "publication_count": 3, "publication_id_list": "15520368;28252024;39021799", "class_list": "", "function": "##Evidence-Data-START## Transcript is intronless :: CD596106.1, GDQH01027258.1 [ECO:0000345] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000015.1. On Mar 15, 2007 this sequence version replaced XP_684331.1., [RefSeq]; Plays a role in immunological synaptic F-actin density and architecture organization. Regulates actin reorganization in lymphocytes, possibly through the modulation of Rac1 activity. Required for the formation of membrane ruffles during macropinocytosis. Plays a role in cell migration and is required for the formation of cup-like structures during trans-endothelial migration of leukocytes. Binds phospholipids in an activation-dependent manner; thereby acting as an anchor for other proteins to the plasma membrane (PM). Plays a role in exocytosis of cytotoxic granules (CG) by lymphocytes/Component of the exocytosis machinery in natural killer (NK) and CD8+ T cells. Promotes the docking of cytotoxic granules (CG) to the plasma membrane through the interaction with UNC13D. Involved in the cytotoxic activity of lymphocytes/primary CD8+ T cells., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NBZ2", "ec_number_list": [], "go_molecular_function": "GO:0003924 GTPase activity;GO:0005525 GTP binding;GO:0019901 protein kinase binding", "go_cellular_component": "GO:0005856 cytoskeleton;GO:0005886 plasma membrane;GO:0031410 cytoplasmic vesicle;GO:0042995 cell projection", "go_biological_process": "GO:0007015 actin filament organization;GO:0032956 regulation of actin cytoskeleton organization;GO:0016601 Rac protein signal transduction;GO:0060326 cell chemotaxis;GO:0008360 regulation of cell shape", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "Q1LY89-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1LYC5-1", "uniprot_id": [ { "id": "Q1LYC5_DANRE", "url": "https://www.uniprot.org/uniprot/Q1LYC5", "type": "external" } ], "mass": 48572.0, "length": 419, "protein_name": "Calcium uptake protein 2, mitochondrial", "gene_name": "micu2", "organism": "Zebrafish", "refseq_name": "calcium uptake protein 2, mitochondrial", "refseq_ac": [ { "id": "NP_001017539", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001017539", "type": "external" } ], "gene_names_uniprotkb": "micu2; efha1; fc37d04; si:ch211-222c22.8; wu:fc37d04; zgc:113196", "gene_names_refseq": "efha1; fc37d04; micu2; si:ch211-222c22.8; wu:fc37d04; zgc:113196", "protein_names_uniprotkb": "Calcium uptake protein 2, mitochondrial", "protein_names_refseq": "EF-hand domain family, member A1; calcium uptake protein 2, mitochondrial", "tax_id": 7955, "disease": "", "pathway": " (dre:548335); (R-DRE-8949215)", "pathway_count": 2, "publication_count": 7, "publication_id_list": "26469318;26854857;27189481;27859782;31371786;32784920;33159854", "class_list": "", "function": "##Evidence-Data-START## RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## ##RefSeq-Attributes-START## gene product(s) localized to mito. :: inferred from homology ##RefSeq-Attributes-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from EH439002.1, EH464933.1, EH448877.1, DT062305.1, EB906767.1, EH465902.1 and AI584211.1. On Jul 14, 2011 this sequence version replaced NP_001017539.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1N571", "ec_number_list": [], "go_molecular_function": "GO:0005509 calcium ion binding", "go_cellular_component": "GO:0005758 mitochondrial intermembrane space;GO:1990246 uniplex complex;GO:0005743 mitochondrial inner membrane", "go_biological_process": "GO:0036444 calcium import into the mitochondrion;GO:0051560 mitochondrial calcium ion homeostasis", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q1LYC5-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1LYC9-1", "uniprot_id": [ { "id": "Q1LYC9_DANRE", "url": "https://www.uniprot.org/uniprot/Q1LYC9", "type": "external" } ], "mass": 24433.0, "length": 216, "protein_name": "3.4.22.17; Calpain small subunit 1a", "gene_name": "capns1a", "organism": "Zebrafish", "refseq_name": "calpain small subunit 1a", "refseq_ac": [ { "id": "NP_001017899", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001017899", "type": "external" } ], "gene_names_uniprotkb": "capns1a; capns1; cb616; wu:fb81g08; wu:fl09e04; zgc:110603", "gene_names_refseq": "capns1a; capns1; cb616; wu:fb81g08; wu:fl09e04; zgc:110603", "protein_names_uniprotkb": "3.4.22.17; Calpain small subunit 1a", "protein_names_refseq": "calpain small subunit 1a", "tax_id": 7955, "disease": "", "pathway": " (dre:550598); (R-DRE-1474228); (R-DRE-9856530); (R-DRE-9860927)", "pathway_count": 4, "publication_count": 10, "publication_id_list": "15595700;16109975;18265014;25518849;26469318;26908177;27189481;28252024;30224706;32784920", "class_list": "", "function": "", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1N5G8", "ec_number_list": [ { "id": "3.4.22.54", "url": "https://www.rhea-db.org/rhea/?query=ec:3.4.22.54", "type": "external" }, { "id": "3.4.22.17", "url": "https://www.rhea-db.org/rhea/?query=ec:3.4.22.17", "type": "external" } ], "go_molecular_function": "GO:0005509 calcium ion binding", "go_cellular_component": "GO:0005886 plasma membrane;GO:0110158 calpain complex", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "Q1LYC9-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1LYE4-1", "uniprot_id": [ { "id": "Q1LYE4_DANRE", "url": "https://www.uniprot.org/uniprot/Q1LYE4", "type": "external" } ], "mass": 38916.0, "length": 347, "protein_name": "Inhibin alpha chain", "gene_name": "inha", "organism": "Zebrafish", "refseq_name": "inhibin alpha chain precursor", "refseq_ac": [ { "id": "NP_001038669", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001038669", "type": "external" } ], "gene_names_uniprotkb": "inha; si:dkey-91f15.2", "gene_names_refseq": "inha; si:dkey-91f15.2", "protein_names_uniprotkb": "Inhibin alpha chain", "protein_names_refseq": "inhibin alpha chain precursor; inhibin, alpha", "tax_id": 7955, "disease": "prostate cancer (Disease Ontology:DOID:10283); prostate carcinoma (Disease Ontology:DOID:10286); Sertoli-Leydig cell tumor (Disease Ontology:DOID:2997); invasive ductal carcinoma (Disease Ontology:DOID:3008); embryonal carcinoma (Disease Ontology:DOID:3308); seminoma (Disease Ontology:DOID:4440); dysgerminoma (Disease Ontology:DOID:4441)", "pathway": " (dre:570520); (R-DRE-1502540); (R-DRE-201451); (R-DRE-209822); (R-DRE-9839406)", "pathway_count": 5, "publication_count": 10, "publication_id_list": "19602521;21734261;23843234;25436775;25993524;35111746;36469526;36520929;36769379;37713421", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GFIL01013401.1, SRR32588722.43817152.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505372, SAMEA4476753 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000006.1. On Sep 1, 2006 this sequence version replaced XP_699101.1. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications., [RefSeq]; Inhibins and activins inhibit and activate, respectively, the secretion of follitropin by the pituitary gland. Inhibins/activins are involved in regulating a number of diverse functions such as hypothalamic and pituitary hormone secretion, gonadal hormone secretion, germ cell development and maturation, erythroid differentiation, insulin secretion, nerve cell survival, embryonic axial development or bone growth, depending on their subunit composition. Inhibins appear to oppose the functions of activins., [UniProtKB, UniProtKB]; Rescue of bmp15 deficiency in zebrafish by mutation of inha reveals mechanisms of BMP15 regulation of folliculogenesis. Publication Status: Online-Only, [RefSeq, PubMed]; The stimulation of inha expression by FSH and the potential inhibition of FSH by inhibin suggest a possible existence of a negative feedback loop between the pituitary and ovary in the zebrafish., [RefSeq, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 7, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NA81", "ec_number_list": [], "go_molecular_function": "GO:0005125 cytokine activity;GO:0005179 hormone activity;GO:0008083 growth factor activity", "go_cellular_component": "GO:0005615 extracellular space", "go_biological_process": "GO:0007178 cell surface receptor protein serine/threonine kinase signaling pathway;GO:1900193 regulation of oocyte maturation", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "Q1LYE4-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1LYG5-1", "uniprot_id": [ { "id": "Q1LYG5_DANRE", "url": "https://www.uniprot.org/uniprot/Q1LYG5", "type": "external" } ], "mass": 94978.0, "length": 854, "protein_name": "Elongation factor 2a.1", "gene_name": "eef2a.1", "organism": "Zebrafish", "refseq_name": "elongation factor 2a.1", "refseq_ac": [ { "id": "NP_001038626", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001038626", "type": "external" } ], "gene_names_uniprotkb": "eef2a.1; si:dkey-110c1.3; zgc:113191", "gene_names_refseq": "eef2a.1; si:dkey-110c1.3; zgc:113191", "protein_names_uniprotkb": "Elongation factor 2a.1", "protein_names_refseq": "elongation factor 2a.1", "tax_id": 7955, "disease": "spinocerebellar ataxia 26 (Disease Ontology:DOID:0050975); prostate cancer (Disease Ontology:DOID:10283); stomach cancer (Disease Ontology:DOID:10534); Alzheimer's disease (Disease Ontology:DOID:10652); glaucoma (Disease Ontology:DOID:1686); rectum adenocarcinoma (Disease Ontology:DOID:1996); colon adenocarcinoma (Disease Ontology:DOID:234); brain glioblastoma multiforme (Disease Ontology:DOID:3073); lung non-small cell carcinoma (Disease Ontology:DOID:3908); lung adenocarcinoma (Disease Ontology:DOID:3910); lung small cell carcinoma (Disease Ontology:DOID:5409); colorectal cancer (Disease Ontology:DOID:9256)", "pathway": " (dre:792182); (R-DRE-156902); (R-DRE-5358493); (R-DRE-6798695); (R-DRE-8876725)", "pathway_count": 5, "publication_count": 4, "publication_id_list": "25260251;26226634;26469318;28252024", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: SRR32588735.1663291.1, SRR32588731.1254771.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505392, SAMEA4476733 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000022.1. On Jun 25, 2025 this sequence version replaced NP_001038626.2., [RefSeq]; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 12, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NA43", "ec_number_list": [ { "id": "3.6.5.2", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.5.2", "type": "external" }, { "id": "3.6.5.3", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.5.3", "type": "external" }, { "id": "3.6.5.5", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.5.5", "type": "external" }, { "id": "3.6.1.5", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.1.5", "type": "external" }, { "id": "3.6.5.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.5.-", "type": "external" }, { "id": "3.6.1.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.1.-", "type": "external" }, { "id": "3.6.5.4", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.5.4", "type": "external" } ], "go_molecular_function": "GO:0003924 GTPase activity;GO:0005525 GTP binding;GO:0003746 translation elongation factor activity;GO:0043022 ribosome binding;GO:0016787 hydrolase activity", "go_cellular_component": "GO:0005829 cytosol;GO:1990904 ribonucleoprotein complex", "go_biological_process": "GO:0006414 translational elongation", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "Q1LYG5-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1LYL8-1", "uniprot_id": [ { "id": "ASTE1_DANRE", "url": "https://www.uniprot.org/uniprot/Q1LYL8", "type": "external" } ], "mass": 79228.0, "length": 692, "protein_name": "Single-strand DNA endonuclease ASTE1", "gene_name": "aste1a", "organism": "Zebrafish", "refseq_name": "single-strand DNA endonuclease ASTE1", "refseq_ac": [ { "id": "NP_001092900", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001092900", "type": "external" } ], "gene_names_uniprotkb": "aste1a; si:dkey-11p23.5", "gene_names_refseq": "aste1a; aste1; si:dkey-11p23.5", "protein_names_uniprotkb": "Single-strand DNA endonuclease ASTE1; 3.1.-.-; Protein asteroid homolog 1", "protein_names_refseq": "asteroid homolog 1a; protein asteroid homolog 1; single-strand DNA endonuclease ASTE1", "tax_id": 7955, "disease": "mismatch repair cancer syndrome (Disease Ontology:DOID:0112182); Lynch syndrome (Disease Ontology:DOID:3883)", "pathway": " (dre:100006826)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "23594743", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC163487.1, GFIL01001748.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA708836, SAMN01765705 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from EB892237.1 and BC163487.1. On or before May 19, 2017 this sequence version replaced XP_005158251.1, XP_001345463.1., [RefSeq]; Structure-specific DNA endonuclease that specifically cleaves single-stranded DNA and 3' overhang DNA., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 2, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "B3DJH6", "ec_number_list": [], "go_molecular_function": "GO:0000014 single-stranded DNA endodeoxyribonuclease activity;GO:1990599 3' overhang single-stranded DNA endodeoxyribonuclease activity", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q1LYL8-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1MSX8-1", "uniprot_id": [ { "id": "Q1MSX8_DANRE", "url": "https://www.uniprot.org/uniprot/Q1MSX8", "type": "external" } ], "mass": 91353.0, "length": 823, "protein_name": "Integrin beta", "gene_name": "itgb5", "organism": "Zebrafish", "refseq_name": "integrin beta-5 precursor", "refseq_ac": [ { "id": "NP_001076305", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001076305", "type": "external" } ], "gene_names_uniprotkb": "itgb5; wu:fi30h12", "gene_names_refseq": "itgb5; wu:fi30h12", "protein_names_uniprotkb": "Integrin beta", "protein_names_refseq": "integrin beta-5 precursor", "tax_id": 7955, "disease": "cancer (Disease Ontology:DOID:162)", "pathway": " (dre:563556); (R-DRE-1236973); (R-DRE-2129379); (R-DRE-216083); (R-DRE-2173789); (R-DRE-3000178)", "pathway_count": 6, "publication_count": 9, "publication_id_list": "16109975;17626277;19158186;20005219;20364122;20843856;28252024;32033529;35165417", "class_list": "", "function": "##Evidence-Data-START## RNAseq introns :: single sample supports all introns SAMEA3505371, SAMEA3505389 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AL974314.21. On Mar 15, 2007 this sequence version replaced XP_692014.2. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NC23", "ec_number_list": [], "go_molecular_function": "GO:0005178 integrin binding;GO:0046872 metal ion binding", "go_cellular_component": "GO:0005925 focal adhesion;GO:0009986 cell surface;GO:0008305 integrin complex", "go_biological_process": "GO:0007229 integrin-mediated signaling pathway;GO:0016477 cell migration;GO:0007160 cell-matrix adhesion;GO:0007179 transforming growth factor beta receptor signaling pathway;GO:0033627 cell adhesion mediated by integrin", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "Q1MSX8-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1MT02-1", "uniprot_id": [ { "id": "Q1MT02_DANRE", "url": "https://www.uniprot.org/uniprot/Q1MT02", "type": "external" } ], "mass": 18453.0, "length": 164, "protein_name": "Endothelin-2 precursor", "gene_name": "edn2", "organism": "Zebrafish", "refseq_name": "endothelin-2 precursor", "refseq_ac": [ { "id": "NP_001038650", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001038650", "type": "external" } ], "gene_names_uniprotkb": "edn2; si:ch211-202b2.2", "gene_names_refseq": "edn2; si:ch211-202b2.2", "protein_names_uniprotkb": "Endothelin-2 precursor", "protein_names_refseq": "endothelin-2 precursor", "tax_id": 7955, "disease": "pre-eclampsia (Disease Ontology:DOID:10591); hypertension (Disease Ontology:DOID:10763); pulmonary hypertension (Disease Ontology:DOID:6432)", "pathway": " (dre:569550); (R-DRE-375276); (R-DRE-416476)", "pathway_count": 3, "publication_count": 8, "publication_id_list": "19174480;23499359;23656968;26469318;27189481;28245924;36823429;37179373", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GFIL01009164.1, GDQH01019678.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000019.1. On Sep 1, 2006 this sequence version replaced XP_698037.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 3, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NA55", "ec_number_list": [], "go_molecular_function": "GO:0005179 hormone activity;GO:0031708 endothelin B receptor binding", "go_cellular_component": "GO:0005615 extracellular space", "go_biological_process": "GO:0045987 positive regulation of smooth muscle contraction;GO:0006874 intracellular calcium ion homeostasis;GO:0019229 regulation of vasoconstriction;GO:0003100 regulation of systemic arterial blood pressure by endothelin;GO:0014826 vein smooth muscle contraction", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "Q1MT02-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1MTD4-1", "uniprot_id": [ { "id": "CR19A_DANRE", "url": "https://www.uniprot.org/uniprot/Q1MTD4", "type": "external" } ], "mass": 27852.0, "length": 242, "protein_name": "Uncharacterized protein C18orf19 homolog A", "gene_name": "si:ch211-105d11.2", "organism": "Zebrafish", "refseq_name": "uncharacterized protein C18orf19 homolog A", "refseq_ac": [ { "id": "NP_001038459", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001038459", "type": "external" } ], "gene_names_uniprotkb": "si:ch211-105d11.2", "gene_names_refseq": "fam210aa; fi06g08; mims1a; si:ch211-105d11.2; wu:fi06g08", "protein_names_uniprotkb": "Uncharacterized protein C18orf19 homolog A", "protein_names_refseq": "family with sequence similarity 210 member Aa; uncharacterized protein C18orf19 homolog A", "tax_id": 7955, "disease": "", "pathway": " (dre:562734)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "23594743", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC133959.1, EH453754.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505391, SAMEA4476759 [ECO:0006172] ##Evidence-Data-END## ##RefSeq-Attributes-START## gene product(s) localized to mito. :: inferred from homology ##RefSeq-Attributes-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC133959.1. On Sep 1, 2006 this sequence version replaced XP_691202.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A3KNQ7", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005739 mitochondrion;GO:0016020 membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q1MTD4-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1MTH6-1", "uniprot_id": [ { "id": "Q1MTH6_DANRE", "url": "https://www.uniprot.org/uniprot/Q1MTH6", "type": "external" } ], "mass": 40625.0, "length": 358, "protein_name": "Programmed cell death protein 2", "gene_name": "pdcd2", "organism": "Zebrafish", "refseq_name": "programmed cell death protein 2", "refseq_ac": [ { "id": "NP_001038603", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001038603", "type": "external" } ], "gene_names_uniprotkb": "pdcd2; zgc:63685", "gene_names_refseq": "pdcd2; zgc:63685", "protein_names_uniprotkb": "Programmed cell death protein 2", "protein_names_refseq": "programmed cell death protein 2", "tax_id": 7955, "disease": "", "pathway": " (dre:393370)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "15194198;22800338;26469318;27189481;31560986", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC054132.1, GDQQ01004465.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505372 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000013.1. On Jun 25, 2025 this sequence version replaced NP_001038603.1., [RefSeq]; Pdcd2 plays a critical role in regulating the transcriptional hierarchy controlling hematopoietic lineage determination., [RefSeq, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NA20", "ec_number_list": [], "go_molecular_function": "GO:0008270 zinc ion binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm", "go_biological_process": "GO:0060218 hematopoietic stem cell differentiation;GO:0030218 erythrocyte differentiation;GO:0007088 regulation of mitotic nuclear division", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q1MTH6-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1RLQ5-1", "uniprot_id": [ { "id": "DIK1A_DANRE", "url": "https://www.uniprot.org/uniprot/Q1RLQ5", "type": "external" } ], "mass": 48592.0, "length": 428, "protein_name": "Divergent protein kinase domain 1A", "gene_name": "dipk1a", "organism": "Zebrafish", "refseq_name": "divergent protein kinase domain 1A", "refseq_ac": [ { "id": "NP_001035444", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001035444", "type": "external" } ], "gene_names_uniprotkb": "dipk1a; fam69a; zgc:136922", "gene_names_refseq": "dipk1aa; dipk1a; fam69aa; fam69a; fc67f08; wu:fc67f08; zgc:136922", "protein_names_uniprotkb": "Divergent protein kinase domain 1A; Protein FAM69A", "protein_names_refseq": "divergent protein kinase domain 1A; family with sequence similarity 69, member Aa; family with sequence similarity 69, member A; protein FAM69A", "tax_id": 7955, "disease": "", "pathway": " (dre:678606)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC115333.1, EG584515.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505371, SAMEA3505376 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC115333.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005789 endoplasmic reticulum membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q1RLQ5-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1RM03-1", "uniprot_id": [ { "id": "TCHP_DANRE", "url": "https://www.uniprot.org/uniprot/Q1RM03", "type": "external" } ], "mass": 62351.0, "length": 499, "protein_name": "Trichoplein keratin filament-binding protein", "gene_name": "tchp", "organism": "Zebrafish", "refseq_name": "trichoplein keratin filament-binding protein", "refseq_ac": [ { "id": "NP_001035433", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001035433", "type": "external" } ], "gene_names_uniprotkb": "tchp; zgc:136634", "gene_names_refseq": "tchp; zgc:136634", "protein_names_uniprotkb": "Trichoplein keratin filament-binding protein; Protein TCHP", "protein_names_refseq": "trichoplein keratin filament-binding protein", "tax_id": 7955, "disease": "", "pathway": " (dre:678595)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "23594743", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC115204.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505373, SAMEA3505378 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC115204.1., [RefSeq]; May act as a 'capping' or 'branching' protein for keratin filaments in the cell periphery. May regulate K8/K18 filament and desmosome organization mainly at the apical or peripheral regions of simple epithelial cells (By similarity)., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q502P3", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005813 centrosome;GO:0045095 keratin filament", "go_biological_process": "GO:0006915 apoptotic process", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q1RM03-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1RM09-1", "uniprot_id": [ { "id": "BASP1_DANRE", "url": "https://www.uniprot.org/uniprot/Q1RM09", "type": "external" } ], "mass": 19997.0, "length": 197, "protein_name": "Brain acid soluble protein 1 homolog", "gene_name": "basp1", "organism": "Zebrafish", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "basp1; si:ch211-220f13.1", "gene_names_refseq": "", "protein_names_uniprotkb": "Brain acid soluble protein 1 homolog", "protein_names_refseq": "", "tax_id": 7955, "disease": "", "pathway": " (dre:569631); (R-DRE-9035034)", "pathway_count": 2, "publication_count": 1, "publication_id_list": "23594743", "class_list": "", "function": "", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "B0S538", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "GO:0045766 positive regulation of angiogenesis", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q1RM09-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q24JV9-1", "uniprot_id": [ { "id": "L3BPA_DANRE", "url": "https://www.uniprot.org/uniprot/Q24JV9", "type": "external" } ], "mass": 64131.0, "length": 567, "protein_name": "Galectin-3-binding protein A", "gene_name": "lgals3bpa", "organism": "Zebrafish", "refseq_name": "galectin-3-binding protein A precursor", "refseq_ac": [ { "id": "NP_001035130", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001035130", "type": "external" } ], "gene_names_uniprotkb": "lgals3bpa; lgals3bp; zgc:136780", "gene_names_refseq": "lgals3bp.3; lgals3bpa; lgals3bp; zgc:136780", "protein_names_uniprotkb": "Galectin-3-binding protein A; Lectin galactoside-binding soluble 3-binding protein A", "protein_names_refseq": "galectin-3-binding protein A precursor; galectin-3-binding protein A; lectin galactoside-binding soluble 3-binding protein A; lectin, galactoside-binding, soluble, 3 binding protein a", "tax_id": 7955, "disease": "", "pathway": " (dre:677742)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC114268.1, EH441733.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA708836, SAMN01765705 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC114268.1., [RefSeq]; Promotes integrin-mediated cell adhesion., [UniProtKB]", "predicted_glycosites": 7, "predicted_n_glycosites": 7, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 7, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005615 extracellular space;GO:0016020 membrane", "go_biological_process": "GO:0007155 cell adhesion", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q24JV9-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000010000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q2AB30-1", "uniprot_id": [ { "id": "Q2AB30_DANRE", "url": "https://www.uniprot.org/uniprot/Q2AB30", "type": "external" } ], "mass": 36279.0, "length": 313, "protein_name": "Taste receptor type 2", "gene_name": "tas2r201.1", "organism": "Zebrafish", "refseq_name": "taste receptor, type 2, member 201, tandem duplicate 1", "refseq_ac": [ { "id": "NP_001077333", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001077333", "type": "external" } ], "gene_names_uniprotkb": "tas2r201.1; T2R3a; tas2r2a", "gene_names_refseq": "T2R3a; tas2r201.1; tas2r2a", "protein_names_uniprotkb": "Taste receptor type 2", "protein_names_refseq": "bitter taste receptor; taste receptor, type 2, member 201, tandem duplicate 1; taste receptor, type 2, member 201.1; taste receptor, type 2, member 2a; zfT2R2a", "tax_id": 7955, "disease": "", "pathway": " (dre:795929)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "16274966;16484289;17522303;21452212;33355666;34499158", "class_list": "", "function": "PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AB249825.1. On Apr 5, 2007 this sequence version replaced XP_001336210.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0004930 G protein-coupled receptor activity;GO:0033038 bitter taste receptor activity", "go_cellular_component": "GO:0016020 membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q2AB30-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q2L6K8-1", "uniprot_id": [ { "id": "CNPY4_DANRE", "url": "https://www.uniprot.org/uniprot/Q2L6K8", "type": "external" } ], "mass": 25222.0, "length": 217, "protein_name": "Protein canopy 4", "gene_name": "cnpy4", "organism": "Zebrafish", "refseq_name": "protein canopy 4 precursor", "refseq_ac": [ { "id": "NP_001034602", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001034602", "type": "external" } ], "gene_names_uniprotkb": "cnpy4", "gene_names_refseq": "cnpy4", "protein_names_uniprotkb": "Protein canopy 4", "protein_names_refseq": "PRAT4; canopy4; protein canopy 4 precursor; protein canopy 4", "tax_id": 7955, "disease": "", "pathway": " (dre:568776)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "16488878", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: AB201386.1, BC152092.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505375, SAMEA3505376 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AB201386.1. On Feb 15, 2006 this sequence version replaced XP_697220.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0005102 signaling receptor binding", "go_cellular_component": "GO:0005576 extracellular region", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q2L6K8-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q2PR85-1", "uniprot_id": [ { "id": "Q2PR85_DANRE", "url": "https://www.uniprot.org/uniprot/Q2PR85", "type": "external" } ], "mass": 36828.0, "length": 322, "protein_name": "Odorant receptor 132-4", "gene_name": "or92a2", "organism": "Zebrafish", "refseq_name": "odorant receptor 132-4", "refseq_ac": [ { "id": "NP_001121865", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001121865", "type": "external" } ], "gene_names_uniprotkb": "or92a2; or132-4; or21.30", "gene_names_refseq": "or132-4; or21.30; or92a2", "protein_names_uniprotkb": "Odorant receptor 132-4", "protein_names_refseq": "Dr3OR8.6; odorant receptor 132-4; odorant receptor, family H, subfamily 132, member 4", "tax_id": 7955, "disease": "", "pathway": " (dre:100149349)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "15824306;16332259;20333175;26108469;31403159;32295537;32471067;36944644", "class_list": "", "function": "PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from DQ306143.1. On Jul 31, 2008 this sequence version replaced XP_001921615.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NK25", "ec_number_list": [], "go_molecular_function": "GO:0004930 G protein-coupled receptor activity;GO:0004984 olfactory receptor activity;GO:0005549 odorant binding", "go_cellular_component": "GO:0016020 membrane", "go_biological_process": "GO:0050911 detection of chemical stimulus involved in sensory perception of smell", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "Q2PR85-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q2PR87-1", "uniprot_id": [ { "id": "Q2PR87_DANRE", "url": "https://www.uniprot.org/uniprot/Q2PR87", "type": "external" } ], "mass": 36676.0, "length": 322, "protein_name": "Odorant receptor 132-2", "gene_name": "or92a4", "organism": "Zebrafish", "refseq_name": "odorant receptor 132-2", "refseq_ac": [ { "id": "NP_001122031", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001122031", "type": "external" } ], "gene_names_uniprotkb": "or92a4; or132-2; or21.31p; or21.33; or21.34", "gene_names_refseq": "or132-2; or21.31p; or21.33; or21.34; or92a4", "protein_names_uniprotkb": "Odorant receptor 132-2", "protein_names_refseq": "Dr3OR8.4; odorant receptor 132-2; odorant receptor, family H, subfamily 132, member 2", "tax_id": 7955, "disease": "", "pathway": " (dre:100147884)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "15824306;16332259;20333175;26108469;32295537;32471067", "class_list": "", "function": "PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from DQ306141.1. On Jul 31, 2008 this sequence version replaced XP_001921704.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8N7UZ28;F1QXH9", "ec_number_list": [], "go_molecular_function": "GO:0004930 G protein-coupled receptor activity;GO:0004984 olfactory receptor activity;GO:0005549 odorant binding", "go_cellular_component": "GO:0016020 membrane", "go_biological_process": "GO:0050911 detection of chemical stimulus involved in sensory perception of smell", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q2PR87-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q2PR99-1", "uniprot_id": [ { "id": "Q2PR99_DANRE", "url": "https://www.uniprot.org/uniprot/Q2PR99", "type": "external" } ], "mass": 38959.0, "length": 341, "protein_name": "Olfactory receptor", "gene_name": "or62a2", "organism": "Zebrafish", "refseq_name": "odorant receptor 125-8", "refseq_ac": [ { "id": "NP_001121878", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001121878", "type": "external" } ], "gene_names_uniprotkb": "or62a2; or125-8; or21.15; or21.55", "gene_names_refseq": "or125-8; or21.15; or21.55; or62a2", "protein_names_uniprotkb": "Olfactory receptor", "protein_names_refseq": "Dr3OR21.16; odorant receptor 125-8; odorant receptor, family E, subfamily 125, member 8", "tax_id": 7955, "disease": "", "pathway": " (dre:100150394)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "15824306;16332259;17301169;20333175;26108469;29020985;32295537", "class_list": "", "function": "PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from DQ306128.1. On Jul 31, 2008 this sequence version replaced XP_001923053.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NHF6", "ec_number_list": [], "go_molecular_function": "GO:0004930 G protein-coupled receptor activity;GO:0004984 olfactory receptor activity;GO:0005549 odorant binding", "go_cellular_component": "GO:0005886 plasma membrane;GO:0016020 membrane", "go_biological_process": "GO:0050911 detection of chemical stimulus involved in sensory perception of smell", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q2PR99-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q2PRA0-1", "uniprot_id": [ { "id": "Q2PRA0_DANRE", "url": "https://www.uniprot.org/uniprot/Q2PRA0", "type": "external" } ], "mass": 36170.0, "length": 311, "protein_name": "Olfactory receptor", "gene_name": "or62b2", "organism": "Zebrafish", "refseq_name": "odorant receptor 125-7", "refseq_ac": [ { "id": "NP_001121886", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001121886", "type": "external" } ], "gene_names_uniprotkb": "or62b2; or125-7; or21.14; or21.56", "gene_names_refseq": "or125-7; or21.14; or21.56; or62b2", "protein_names_uniprotkb": "Olfactory receptor", "protein_names_refseq": "Dr3OR21.15; odorant receptor 125-7; odorant receptor, family E, subfamily 125, member 7", "tax_id": 7955, "disease": "", "pathway": " (dre:100151063)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "15824306;16332259;20333175;26108469;32295537", "class_list": "", "function": "PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from DQ306127.1. On Jul 31, 2008 this sequence version replaced XP_001923049.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8N1TSN9", "ec_number_list": [], "go_molecular_function": "GO:0004930 G protein-coupled receptor activity;GO:0004984 olfactory receptor activity;GO:0005549 odorant binding", "go_cellular_component": "GO:0005886 plasma membrane;GO:0016020 membrane", "go_biological_process": "GO:0050911 detection of chemical stimulus involved in sensory perception of smell", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q2PRA0-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q2PRA2-1", "uniprot_id": [ { "id": "Q2PRA2_DANRE", "url": "https://www.uniprot.org/uniprot/Q2PRA2", "type": "external" } ], "mass": 35733.0, "length": 308, "protein_name": "Olfactory receptor", "gene_name": "or62b4", "organism": "Zebrafish", "refseq_name": "odorant receptor 125-5", "refseq_ac": [ { "id": "NP_001124282", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001124282", "type": "external" } ], "gene_names_uniprotkb": "or62b4; or125-5; or21.12", "gene_names_refseq": "or125-5; or21.12; or62b4", "protein_names_uniprotkb": "Olfactory receptor", "protein_names_refseq": "Dr3OR21.12; odorant receptor 125-5; odorant receptor, family E, subfamily 125, member 5", "tax_id": 7955, "disease": "", "pathway": " (dre:100150375)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "15824306;16332259;20333175;26108469;32295537", "class_list": "", "function": "PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from DQ306125.1. On Aug 6, 2008 this sequence version replaced XP_001921678.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NLG0", "ec_number_list": [], "go_molecular_function": "GO:0004930 G protein-coupled receptor activity;GO:0004984 olfactory receptor activity;GO:0005549 odorant binding", "go_cellular_component": "GO:0005886 plasma membrane;GO:0016020 membrane", "go_biological_process": "GO:0050911 detection of chemical stimulus involved in sensory perception of smell", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q2PRA2-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q2PRA3-1", "uniprot_id": [ { "id": "Q2PRA3_DANRE", "url": "https://www.uniprot.org/uniprot/Q2PRA3", "type": "external" } ], "mass": 35723.0, "length": 307, "protein_name": "Odorant receptor 125-4", "gene_name": "or62b3", "organism": "Zebrafish", "refseq_name": "odorant receptor 125-4", "refseq_ac": [ { "id": "NP_001122039", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001122039", "type": "external" } ], "gene_names_uniprotkb": "or62b3; or125-4; or21.11", "gene_names_refseq": "or125-4; or21.11; or62b3", "protein_names_uniprotkb": "Odorant receptor 125-4", "protein_names_refseq": "Dr3OR21.11; odorant receptor 125-4; odorant receptor, family E, subfamily 125, member 4", "tax_id": 7955, "disease": "", "pathway": " (dre:100148706)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "15824306;16332259;20333175;26108469;27784643;32295537;36944644", "class_list": "", "function": "PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from DQ306124.1. On Jul 31, 2008 this sequence version replaced XP_001923042.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NHL6", "ec_number_list": [], "go_molecular_function": "GO:0004930 G protein-coupled receptor activity;GO:0004984 olfactory receptor activity;GO:0005549 odorant binding", "go_cellular_component": "GO:0005886 plasma membrane;GO:0016020 membrane", "go_biological_process": "GO:0050911 detection of chemical stimulus involved in sensory perception of smell", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q2PRA3-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q2PRA4-1", "uniprot_id": [ { "id": "Q2PRA4_DANRE", "url": "https://www.uniprot.org/uniprot/Q2PRA4", "type": "external" } ], "mass": 35554.0, "length": 309, "protein_name": "Odorant receptor 125-3", "gene_name": "or62b5", "organism": "Zebrafish", "refseq_name": "odorant receptor 125-3", "refseq_ac": [ { "id": "NP_001122044", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001122044", "type": "external" } ], "gene_names_uniprotkb": "or62b5; or125-3; or21.10", "gene_names_refseq": "or125-3; or21.10; or62b5", "protein_names_uniprotkb": "Odorant receptor 125-3", "protein_names_refseq": "Dr3OR21.10; odorant receptor 125-3; odorant receptor, family E, subfamily 125, member 3", "tax_id": 7955, "disease": "", "pathway": " (dre:100149435)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "15824306;16332259;20333175;26108469;32295537", "class_list": "", "function": "PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from DQ306123.1. On Jul 31, 2008 this sequence version replaced XP_001923038.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NK89", "ec_number_list": [], "go_molecular_function": "GO:0004930 G protein-coupled receptor activity;GO:0004984 olfactory receptor activity;GO:0005549 odorant binding", "go_cellular_component": "GO:0005886 plasma membrane;GO:0016020 membrane", "go_biological_process": "GO:0050911 detection of chemical stimulus involved in sensory perception of smell", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q2PRA4-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q2PRA5-1", "uniprot_id": [ { "id": "Q2PRA5_DANRE", "url": "https://www.uniprot.org/uniprot/Q2PRA5", "type": "external" } ], "mass": 35103.0, "length": 306, "protein_name": "Olfactory receptor", "gene_name": "or62a1", "organism": "Zebrafish", "refseq_name": "odorant receptor 125-2", "refseq_ac": [ { "id": "NP_001121874", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001121874", "type": "external" } ], "gene_names_uniprotkb": "or62a1; or125-2; or21.8", "gene_names_refseq": "or125-2; or21.8; or62a1", "protein_names_uniprotkb": "Olfactory receptor", "protein_names_refseq": "Dr3OR21.8; odorant receptor 125-2; odorant receptor, family E, subfamily 125, member 2", "tax_id": 7955, "disease": "", "pathway": " (dre:100150140)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "15824306;16332259;20333175;26108469;32295537", "class_list": "", "function": "PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from DQ306122.1. On Jul 31, 2008 this sequence version replaced XP_001923035.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NI08", "ec_number_list": [], "go_molecular_function": "GO:0004930 G protein-coupled receptor activity;GO:0004984 olfactory receptor activity;GO:0005549 odorant binding", "go_cellular_component": "GO:0005886 plasma membrane;GO:0016020 membrane", "go_biological_process": "GO:0050911 detection of chemical stimulus involved in sensory perception of smell", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q2PRA5-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q2PRA6-1", "uniprot_id": [ { "id": "Q2PRA6_DANRE", "url": "https://www.uniprot.org/uniprot/Q2PRA6", "type": "external" } ], "mass": 36889.0, "length": 319, "protein_name": "Olfactory receptor", "gene_name": "or62a3", "organism": "Zebrafish", "refseq_name": "odorant receptor 125-1", "refseq_ac": [ { "id": "NP_001121884", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001121884", "type": "external" } ], "gene_names_uniprotkb": "or62a3; or125-1; or21.7", "gene_names_refseq": "or125-1; or21.7; or62a3", "protein_names_uniprotkb": "Olfactory receptor", "protein_names_refseq": "Dr3OR21.7; odorant receptor 125-1; odorant receptor, family E, subfamily 125, member 1", "tax_id": 7955, "disease": "", "pathway": " (dre:100150823)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "15824306;16332259;20333175;21834959;26108469;26892307;32295537", "class_list": "", "function": "PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from DQ306121.1. On Jul 31, 2008 this sequence version replaced XP_001923034.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NI18", "ec_number_list": [], "go_molecular_function": "GO:0004930 G protein-coupled receptor activity;GO:0004984 olfactory receptor activity;GO:0005549 odorant binding", "go_cellular_component": "GO:0005886 plasma membrane;GO:0016020 membrane", "go_biological_process": "GO:0050911 detection of chemical stimulus involved in sensory perception of smell", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q2PRA6-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q2PRA7-1", "uniprot_id": [ { "id": "Q2PRA7_DANRE", "url": "https://www.uniprot.org/uniprot/Q2PRA7", "type": "external" } ], "mass": 35738.0, "length": 311, "protein_name": "Odorant receptor 123-1", "gene_name": "or61a1", "organism": "Zebrafish", "refseq_name": "odorant receptor 123-1", "refseq_ac": [ { "id": "NP_001124277", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001124277", "type": "external" } ], "gene_names_uniprotkb": "or61a1; or123-1; or21.6", "gene_names_refseq": "Dr3OR21.6; or123-1; or21.6; or61a1", "protein_names_uniprotkb": "Odorant receptor 123-1", "protein_names_refseq": "odorant receptor 123-1; odorant receptor, family E, subfamily 123, member 1", "tax_id": 7955, "disease": "", "pathway": " (dre:100149422)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "15824306;16332259;20333175;21834959;26108469;32295537", "class_list": "", "function": "PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from DQ306120.1. On Aug 6, 2008 this sequence version replaced XP_001921637.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NIF6", "ec_number_list": [], "go_molecular_function": "GO:0004930 G protein-coupled receptor activity;GO:0004984 olfactory receptor activity;GO:0005549 odorant binding", "go_cellular_component": "GO:0005886 plasma membrane;GO:0016020 membrane", "go_biological_process": "GO:0050911 detection of chemical stimulus involved in sensory perception of smell", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q2PRA7-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q2PRA8-1", "uniprot_id": [ { "id": "Q2PRA8_DANRE", "url": "https://www.uniprot.org/uniprot/Q2PRA8", "type": "external" } ], "mass": 35264.0, "length": 308, "protein_name": "Olfactory receptor", "gene_name": "or61c2", "organism": "Zebrafish", "refseq_name": "odorant receptor 124-1", "refseq_ac": [ { "id": "NP_001121875", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001121875", "type": "external" } ], "gene_names_uniprotkb": "or61c2; or124-1; or21.5", "gene_names_refseq": "or124-1; or21.5; or61c2", "protein_names_uniprotkb": "Olfactory receptor", "protein_names_refseq": "Dr3OR21.5; odorant receptor 124-1; odorant receptor, family E, subfamily 124, member 1", "tax_id": 7955, "disease": "", "pathway": " (dre:100150158)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "15824306;16332259;17301169;20333175;26108469;32295537", "class_list": "", "function": "PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from DQ306119.1. On Jul 31, 2008 this sequence version replaced XP_001921628.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NHJ4", "ec_number_list": [], "go_molecular_function": "GO:0004930 G protein-coupled receptor activity;GO:0004984 olfactory receptor activity;GO:0005549 odorant binding", "go_cellular_component": "GO:0005886 plasma membrane;GO:0016020 membrane", "go_biological_process": "GO:0050911 detection of chemical stimulus involved in sensory perception of smell", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q2PRA8-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q2PRA9-1", "uniprot_id": [ { "id": "Q2PRA9_DANRE", "url": "https://www.uniprot.org/uniprot/Q2PRA9", "type": "external" } ], "mass": 35485.0, "length": 310, "protein_name": "Odorant receptor 124-2", "gene_name": "or61c1", "organism": "Zebrafish", "refseq_name": "odorant receptor 124-2", "refseq_ac": [ { "id": "NP_001121893", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001121893", "type": "external" } ], "gene_names_uniprotkb": "or61c1; or124-2; or21.3", "gene_names_refseq": "or124-2; or21.3; or61c1", "protein_names_uniprotkb": "Odorant receptor 124-2", "protein_names_refseq": "Dr3OR21.3; odorant receptor 124-2; odorant receptor, family E, subfamily 124, member 2", "tax_id": 7955, "disease": "", "pathway": " (dre:100151554)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "15824306;16332259;20333175;26108469;32295537", "class_list": "", "function": "PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from DQ306118.1. On Jul 31, 2008 this sequence version replaced XP_001921600.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NK44", "ec_number_list": [], "go_molecular_function": "GO:0004930 G protein-coupled receptor activity;GO:0004984 olfactory receptor activity;GO:0005549 odorant binding", "go_cellular_component": "GO:0005886 plasma membrane;GO:0016020 membrane", "go_biological_process": "GO:0050911 detection of chemical stimulus involved in sensory perception of smell", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q2PRA9-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q2PRB2-1", "uniprot_id": [ { "id": "Q2PRB2_DANRE", "url": "https://www.uniprot.org/uniprot/Q2PRB2", "type": "external" } ], "mass": 36540.0, "length": 321, "protein_name": "Odorant receptor 131-1", "gene_name": "or91a1", "organism": "Zebrafish", "refseq_name": "odorant receptor 131-1", "refseq_ac": [ { "id": "NP_001122051", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001122051", "type": "external" } ], "gene_names_uniprotkb": "or91a1; or131-1; or15.24", "gene_names_refseq": "or131-1; or15.24; or91a1", "protein_names_uniprotkb": "Odorant receptor 131-1", "protein_names_refseq": "Dr3OR15.18; odorant receptor 131-1; odorant receptor, family H, subfamily 131, member 1", "tax_id": 7955, "disease": "", "pathway": " (dre:100150515)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "15824306;16332259;20333175;21834959;26108469;32295537", "class_list": "", "function": "PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from DQ306115.1. On Jul 31, 2008 this sequence version replaced XP_001923090.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NI68", "ec_number_list": [], "go_molecular_function": "GO:0004930 G protein-coupled receptor activity;GO:0004984 olfactory receptor activity;GO:0005549 odorant binding", "go_cellular_component": "GO:0016020 membrane", "go_biological_process": "GO:0050911 detection of chemical stimulus involved in sensory perception of smell", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q2PRB2-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q2PRB3-1", "uniprot_id": [ { "id": "Q2PRB3_DANRE", "url": "https://www.uniprot.org/uniprot/Q2PRB3", "type": "external" } ], "mass": 36194.0, "length": 317, "protein_name": "Odorant receptor 102-5", "gene_name": "or30by1", "organism": "Zebrafish", "refseq_name": "odorant receptor 102-5", "refseq_ac": [ { "id": "NP_001034714", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001034714", "type": "external" } ], "gene_names_uniprotkb": "or30by1; Dr3OR15.53; olfr5.2; or102-5; or15.61; or5.2", "gene_names_refseq": "Dr3OR15.53; olfr5.2; or102-5; or15.61; or30by1; or5.2", "protein_names_uniprotkb": "Odorant receptor 102-5", "protein_names_refseq": "odorant receptor 102-5; odorant receptor, family 5, member 2; odorant receptor, family C, subfamily 102, member 5; olfactory receptor protein 5.2", "tax_id": 7955, "disease": "", "pathway": " (dre:554781)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "11161797;11750698;16332259;19159490;20333175;26108469;32295537", "class_list": "", "function": "PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from DQ306114.1. On or before Apr 6, 2008 this sequence version replaced NP_571812.1, XP_701987.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1N884", "ec_number_list": [], "go_molecular_function": "GO:0004930 G protein-coupled receptor activity;GO:0004984 olfactory receptor activity", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q2PRB3-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q2PRB9-1", "uniprot_id": [ { "id": "Q2PRB9_DANRE", "url": "https://www.uniprot.org/uniprot/Q2PRB9", "type": "external" } ], "mass": 36325.0, "length": 320, "protein_name": "Odorant receptor 103-3", "gene_name": "or30bt5", "organism": "Zebrafish", "refseq_name": "odorant receptor 103-3", "refseq_ac": [ { "id": "NP_001121851", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001121851", "type": "external" } ], "gene_names_uniprotkb": "or30bt5; olfr13.5p; or103-3; or13.5p; or15.55", "gene_names_refseq": "olfr13.5p; or103-3; or13.5p; or15.55; or30bt5", "protein_names_uniprotkb": "Odorant receptor 103-3", "protein_names_refseq": "Dr3OR15.46; odorant receptor 103-3; odorant receptor, family 13, member 5, pseudogene; odorant receptor, family C, subfamily 103, member 3; olfactory receptor protein 13.5p", "tax_id": 7955, "disease": "", "pathway": " (dre:100148313)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "11161797;11750698;15824306;16332259;20333175;26108469;32295537;36944644", "class_list": "", "function": "PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from DQ306107.1. On Jul 31, 2008 this sequence version replaced XP_001922531.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NHZ1", "ec_number_list": [], "go_molecular_function": "GO:0004930 G protein-coupled receptor activity;GO:0004984 olfactory receptor activity;GO:0005549 odorant binding", "go_cellular_component": "GO:0005886 plasma membrane;GO:0016020 membrane", "go_biological_process": "GO:0050911 detection of chemical stimulus involved in sensory perception of smell", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "Q2PRB9-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q2PRC1-1", "uniprot_id": [ { "id": "Q2PRC1_DANRE", "url": "https://www.uniprot.org/uniprot/Q2PRC1", "type": "external" } ], "mass": 36467.0, "length": 320, "protein_name": "Olfactory receptor", "gene_name": "or30bt3", "organism": "Zebrafish", "refseq_name": "odorant receptor 103-5", "refseq_ac": [ { "id": "NP_571828", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_571828", "type": "external" } ], "gene_names_uniprotkb": "or30bt3; olfr13.3; or103-5; or13.3; or15.53; or8c", "gene_names_refseq": "olfr13.3; or103-5; or13.3; or15.53; or30bt3; or8c", "protein_names_uniprotkb": "Olfactory receptor", "protein_names_refseq": "Dr3OR15.44; odorant receptor 103-5; odorant receptor 8c; odorant receptor, family 13, member 3; odorant receptor, family C, subfamily 103, member 5; olfactory receptor protein 13.3", "tax_id": 7955, "disease": "", "pathway": " (dre:80371)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "15824306;16332259;17301169;20333175;26108469;26469318;36944644", "class_list": "", "function": "", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0004930 G protein-coupled receptor activity;GO:0004984 olfactory receptor activity;GO:0005549 odorant binding", "go_cellular_component": "GO:0005886 plasma membrane;GO:0016020 membrane", "go_biological_process": "GO:0050911 detection of chemical stimulus involved in sensory perception of smell", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q2PRC1-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q2PRD7-1", "uniprot_id": [ { "id": "Q2PRD7_DANRE", "url": "https://www.uniprot.org/uniprot/Q2PRD7", "type": "external" } ], "mass": 35600.0, "length": 312, "protein_name": "Olfactory receptor", "gene_name": "or71as1", "organism": "Zebrafish", "refseq_name": "odorant receptor 118-2", "refseq_ac": [ { "id": "NP_001122052", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001122052", "type": "external" } ], "gene_names_uniprotkb": "or71as1; or118-2; or15.36", "gene_names_refseq": "or118-2; or15.36; or71as1", "protein_names_uniprotkb": "Olfactory receptor", "protein_names_refseq": "Dr3OR15.27; odorant receptor 118-2; odorant receptor, family F, subfamily 118, member 2", "tax_id": 7955, "disease": "", "pathway": " (dre:100150703)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "15824306;16332259;20333175;26108469;32295537", "class_list": "", "function": "PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from DQ306089.1. On Jul 31, 2008 this sequence version replaced XP_001922458.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NHQ4", "ec_number_list": [], "go_molecular_function": "GO:0004930 G protein-coupled receptor activity;GO:0004984 olfactory receptor activity;GO:0005549 odorant binding", "go_cellular_component": "GO:0005886 plasma membrane;GO:0016020 membrane", "go_biological_process": "GO:0050911 detection of chemical stimulus involved in sensory perception of smell", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q2PRD7-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q2PRD8-1", "uniprot_id": [ { "id": "Q2PRD8_DANRE", "url": "https://www.uniprot.org/uniprot/Q2PRD8", "type": "external" } ], "mass": 36121.0, "length": 313, "protein_name": "Odorant receptor 118-3", "gene_name": "or71ar1", "organism": "Zebrafish", "refseq_name": "odorant receptor 118-3", "refseq_ac": [ { "id": "NP_001121889", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001121889", "type": "external" } ], "gene_names_uniprotkb": "or71ar1; or118-3; or15.35", "gene_names_refseq": "or118-3; or15.35; or71ar1", "protein_names_uniprotkb": "Odorant receptor 118-3", "protein_names_refseq": "Dr3OR15.26; odorant receptor 118-3; odorant receptor, family F, subfamily 118, member 3", "tax_id": 7955, "disease": "", "pathway": " (dre:100151390)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "15824306;16332259;20333175;26108469;29020985;29551974;32295537", "class_list": "", "function": "PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from DQ306088.1. On Jul 31, 2008 this sequence version replaced XP_001922451.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NI23", "ec_number_list": [], "go_molecular_function": "GO:0004930 G protein-coupled receptor activity;GO:0004984 olfactory receptor activity;GO:0005549 odorant binding", "go_cellular_component": "GO:0005886 plasma membrane;GO:0016020 membrane", "go_biological_process": "GO:0050911 detection of chemical stimulus involved in sensory perception of smell", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q2PRD8-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q2PRD9-1", "uniprot_id": [ { "id": "Q2PRD9_DANRE", "url": "https://www.uniprot.org/uniprot/Q2PRD9", "type": "external" } ], "mass": 35457.0, "length": 312, "protein_name": "Olfactory receptor", "gene_name": "or71as2", "organism": "Zebrafish", "refseq_name": "odorant receptor 118-1", "refseq_ac": [ { "id": "NP_001121850", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001121850", "type": "external" } ], "gene_names_uniprotkb": "or71as2; or118-1; or15.33", "gene_names_refseq": "or118-1; or15.33; or71as2", "protein_names_uniprotkb": "Olfactory receptor", "protein_names_refseq": "Dr3OR15.24; odorant receptor 118-1; odorant receptor, family F, subfamily 118, member 1", "tax_id": 7955, "disease": "", "pathway": " (dre:100148300)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "15824306;16332259;20333175;26108469;32295537", "class_list": "", "function": "PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from DQ306087.1. On Jul 31, 2008 this sequence version replaced XP_001922449.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NHD4", "ec_number_list": [], "go_molecular_function": "GO:0004930 G protein-coupled receptor activity;GO:0004984 olfactory receptor activity;GO:0005549 odorant binding", "go_cellular_component": "GO:0005886 plasma membrane;GO:0016020 membrane", "go_biological_process": "GO:0050911 detection of chemical stimulus involved in sensory perception of smell", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q2PRD9-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q2PRE0-1", "uniprot_id": [ { "id": "Q2PRE0_DANRE", "url": "https://www.uniprot.org/uniprot/Q2PRE0", "type": "external" } ], "mass": 36391.0, "length": 326, "protein_name": "Olfactory receptor", "gene_name": "or71at1", "organism": "Zebrafish", "refseq_name": "odorant receptor 117-1", "refseq_ac": [ { "id": "NP_001121860", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001121860", "type": "external" } ], "gene_names_uniprotkb": "or71at1; or117-1", "gene_names_refseq": "or117-1; or71at1", "protein_names_uniprotkb": "Olfactory receptor", "protein_names_refseq": "Dr3OR15.23; odorant receptor 117-1; odorant receptor, family F, subfamily 117, member 1", "tax_id": 7955, "disease": "", "pathway": " (dre:100149043)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "15824306;16332259;17301169;20333175;21834959;26108469;32295537;36944644", "class_list": "", "function": "PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from DQ306086.1. On Jul 31, 2008 this sequence version replaced XP_001922448.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M3AHA3", "ec_number_list": [], "go_molecular_function": "GO:0004930 G protein-coupled receptor activity;GO:0004984 olfactory receptor activity;GO:0005549 odorant binding", "go_cellular_component": "GO:0005886 plasma membrane;GO:0016020 membrane", "go_biological_process": "GO:0050911 detection of chemical stimulus involved in sensory perception of smell", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "Q2PRE0-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q2PRE1-1", "uniprot_id": [ { "id": "Q2PRE1_DANRE", "url": "https://www.uniprot.org/uniprot/Q2PRE1", "type": "external" } ], "mass": 35101.0, "length": 312, "protein_name": "Odorant receptor 116-2", "gene_name": "or71aq2", "organism": "Zebrafish", "refseq_name": "odorant receptor 116-2", "refseq_ac": [ { "id": "NP_001122045", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001122045", "type": "external" } ], "gene_names_uniprotkb": "or71aq2; or116-2; or15.31", "gene_names_refseq": "or116-2; or15.31; or71aq2", "protein_names_uniprotkb": "Odorant receptor 116-2", "protein_names_refseq": "Dr3OR15.22; odorant receptor 116-2; odorant receptor, family F, subfamily 116, member 2", "tax_id": 7955, "disease": "", "pathway": " (dre:100149757)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "15824306;16332259;20333175;21834959;26108469;32295537", "class_list": "", "function": "PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from DQ306085.1. On Jul 31, 2008 this sequence version replaced XP_001922438.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NHM0", "ec_number_list": [], "go_molecular_function": "GO:0004930 G protein-coupled receptor activity;GO:0004984 olfactory receptor activity;GO:0005549 odorant binding", "go_cellular_component": "GO:0005886 plasma membrane;GO:0016020 membrane", "go_biological_process": "GO:0050911 detection of chemical stimulus involved in sensory perception of smell", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q2PRE1-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q2PRE2-1", "uniprot_id": [ { "id": "Q2PRE2_DANRE", "url": "https://www.uniprot.org/uniprot/Q2PRE2", "type": "external" } ], "mass": 35209.0, "length": 311, "protein_name": "Odorant receptor 116-1", "gene_name": "or71aq1", "organism": "Zebrafish", "refseq_name": "odorant receptor 116-1", "refseq_ac": [ { "id": "NP_001122049", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001122049", "type": "external" } ], "gene_names_uniprotkb": "or71aq1; or116-1; or15.30", "gene_names_refseq": "or116-1; or15.30; or71aq1", "protein_names_uniprotkb": "Odorant receptor 116-1", "protein_names_refseq": "Dr3OR15.21; odorant receptor 116-1; odorant receptor, family F, subfamily 116, member 1", "tax_id": 7955, "disease": "", "pathway": " (dre:100150478)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "15824306;16332259;20333175;26108469;29020985;32295537", "class_list": "", "function": "PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from DQ306084.1. On Jul 31, 2008 this sequence version replaced XP_001922434.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NK99", "ec_number_list": [], "go_molecular_function": "GO:0004930 G protein-coupled receptor activity;GO:0004984 olfactory receptor activity;GO:0005549 odorant binding", "go_cellular_component": "GO:0005886 plasma membrane;GO:0016020 membrane", "go_biological_process": "GO:0050911 detection of chemical stimulus involved in sensory perception of smell", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q2PRE2-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q2PRE3-1", "uniprot_id": [ { "id": "Q2PRE3_DANRE", "url": "https://www.uniprot.org/uniprot/Q2PRE3", "type": "external" } ], "mass": 35678.0, "length": 314, "protein_name": "Odorant receptor 114-1", "gene_name": "or55d1", "organism": "Zebrafish", "refseq_name": "odorant receptor 114-1", "refseq_ac": [ { "id": "NP_001122054", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001122054", "type": "external" } ], "gene_names_uniprotkb": "or55d1; or114-1; or15.66", "gene_names_refseq": "or114-1; or15.66; or55d1", "protein_names_uniprotkb": "Odorant receptor 114-1", "protein_names_refseq": "odorant receptor 114-1; odorant receptor, family A, subfamily 114, member 1", "tax_id": 7955, "disease": "", "pathway": " (dre:100150748)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "16332259;20333175;27239939;32295537;36584295", "class_list": "", "function": "PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from DQ306081.1. On Jul 31, 2008 this sequence version replaced XP_001922808.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0004930 G protein-coupled receptor activity;GO:0004984 olfactory receptor activity", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "GO:0043695 detection of pheromone;GO:1902435 regulation of male mating behavior", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q2PRE3-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q2PRE6-1", "uniprot_id": [ { "id": "Q2PRE6_DANRE", "url": "https://www.uniprot.org/uniprot/Q2PRE6", "type": "external" } ], "mass": 36162.0, "length": 315, "protein_name": "Odorant receptor 129-1", "gene_name": "or95a1", "organism": "Zebrafish", "refseq_name": "odorant receptor 129-1", "refseq_ac": [ { "id": "NP_001076406", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001076406", "type": "external" } ], "gene_names_uniprotkb": "or95a1; or129-1; or15.29", "gene_names_refseq": "or129-1; or15.29; or95a1", "protein_names_uniprotkb": "Odorant receptor 129-1", "protein_names_refseq": "odorant receptor 129-1; odorant receptor, family H, subfamily 129, member 1", "tax_id": 7955, "disease": "", "pathway": " (dre:100000097)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "16332259;20333175;26108469;32295537", "class_list": "", "function": "PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from DQ306078.1. On Mar 15, 2007 this sequence version replaced XP_001338167.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M2B3J7", "ec_number_list": [], "go_molecular_function": "GO:0004930 G protein-coupled receptor activity;GO:0004984 olfactory receptor activity;GO:0005549 odorant binding", "go_cellular_component": "GO:0016020 membrane", "go_biological_process": "GO:0050911 detection of chemical stimulus involved in sensory perception of smell", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "Q2PRE6-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q2PRE7-1", "uniprot_id": [ { "id": "Q2PRE7_DANRE", "url": "https://www.uniprot.org/uniprot/Q2PRE7", "type": "external" } ], "mass": 34681.0, "length": 306, "protein_name": "Odorant receptor 135-1", "gene_name": "or90j1", "organism": "Zebrafish", "refseq_name": "odorant receptor 135-1", "refseq_ac": [ { "id": "NP_001077338", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001077338", "type": "external" } ], "gene_names_uniprotkb": "or90j1; or135-1", "gene_names_refseq": "or135-1; or90j1", "protein_names_uniprotkb": "Odorant receptor 135-1", "protein_names_refseq": "Dr3OR8.2; odorant receptor 135-1; odorant receptor, family H, subfamily 135, member 1", "tax_id": 7955, "disease": "", "pathway": " (dre:797763)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "15824306;16332259;20333175;32295537;36944644", "class_list": "", "function": "PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from DQ306077.1. On Apr 5, 2007 this sequence version replaced XP_001338226.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NCS8", "ec_number_list": [], "go_molecular_function": "GO:0004930 G protein-coupled receptor activity;GO:0004984 olfactory receptor activity;GO:0005549 odorant binding", "go_cellular_component": "GO:0016020 membrane", "go_biological_process": "GO:0050911 detection of chemical stimulus involved in sensory perception of smell", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q2PRE7-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q2PRF0-1", "uniprot_id": [ { "id": "Q2PRF0_DANRE", "url": "https://www.uniprot.org/uniprot/Q2PRF0", "type": "external" } ], "mass": 34773.0, "length": 305, "protein_name": "Odorant receptor 128-10", "gene_name": "or64d1", "organism": "Zebrafish", "refseq_name": "odorant receptor 128-10", "refseq_ac": [ { "id": "NP_001121842", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001121842", "type": "external" } ], "gene_names_uniprotkb": "or64d1; or128-10; or15.23", "gene_names_refseq": "or128-10; or15.23; or64d1", "protein_names_uniprotkb": "Odorant receptor 128-10", "protein_names_refseq": "Dr3OR15.17; odorant receptor 128-10; odorant receptor, family E, subfamily 128, member 10", "tax_id": 7955, "disease": "", "pathway": " (dre:100147853)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "15824306;16332259;20333175;21834959;26108469;29020985;32295537", "class_list": "", "function": "PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from DQ306072.1. On Jul 31, 2008 this sequence version replaced XP_001920998.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NHG4", "ec_number_list": [], "go_molecular_function": "GO:0004930 G protein-coupled receptor activity;GO:0004984 olfactory receptor activity;GO:0005549 odorant binding", "go_cellular_component": "GO:0005886 plasma membrane;GO:0016020 membrane", "go_biological_process": "GO:0050911 detection of chemical stimulus involved in sensory perception of smell", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q2PRF0-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q2PRF2-1", "uniprot_id": [ { "id": "Q2PRF2_DANRE", "url": "https://www.uniprot.org/uniprot/Q2PRF2", "type": "external" } ], "mass": 36217.0, "length": 315, "protein_name": "Odorant receptor 126-5", "gene_name": "or62c1", "organism": "Zebrafish", "refseq_name": "odorant receptor 126-5", "refseq_ac": [ { "id": "NP_001121855", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001121855", "type": "external" } ], "gene_names_uniprotkb": "or62c1; or126-5; or15.21", "gene_names_refseq": "or126-5; or15.21; or62c1", "protein_names_uniprotkb": "Odorant receptor 126-5", "protein_names_refseq": "Dr3OR15.15; odorant receptor 126-5; odorant receptor, family E, subfamily 126, member 5", "tax_id": 7955, "disease": "", "pathway": " (dre:100148579)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "15824306;16332259;20333175;26108469;32295537", "class_list": "", "function": "PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from DQ306070.1. On Jul 31, 2008 this sequence version replaced XP_001920963.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NHD7", "ec_number_list": [], "go_molecular_function": "GO:0004930 G protein-coupled receptor activity;GO:0004984 olfactory receptor activity;GO:0005549 odorant binding", "go_cellular_component": "GO:0005886 plasma membrane;GO:0016020 membrane", "go_biological_process": "GO:0050911 detection of chemical stimulus involved in sensory perception of smell", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q2PRF2-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q2PRF3-1", "uniprot_id": [ { "id": "Q2PRF3_DANRE", "url": "https://www.uniprot.org/uniprot/Q2PRF3", "type": "external" } ], "mass": 36340.0, "length": 314, "protein_name": "Odorant receptor 126-4", "gene_name": "or62c4", "organism": "Zebrafish", "refseq_name": "odorant receptor 126-4", "refseq_ac": [ { "id": "NP_001121864", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001121864", "type": "external" } ], "gene_names_uniprotkb": "or62c4; or126-4; or15.20", "gene_names_refseq": "or126-4; or15.20; or62c4", "protein_names_uniprotkb": "Odorant receptor 126-4", "protein_names_refseq": "Dr3OR15.14; odorant receptor 126-4; odorant receptor, family E, subfamily 126, member 4", "tax_id": 7955, "disease": "", "pathway": " (dre:100149311)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "15824306;16332259;20333175;26108469;32295537;36944644", "class_list": "", "function": "PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from DQ306069.1. On Jul 31, 2008 this sequence version replaced XP_001920946.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8N7UZ21", "ec_number_list": [], "go_molecular_function": "GO:0004930 G protein-coupled receptor activity;GO:0004984 olfactory receptor activity;GO:0005549 odorant binding", "go_cellular_component": "GO:0005886 plasma membrane;GO:0016020 membrane", "go_biological_process": "GO:0050911 detection of chemical stimulus involved in sensory perception of smell", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q2PRF3-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q2PRF4-1", "uniprot_id": [ { "id": "Q2PRF4_DANRE", "url": "https://www.uniprot.org/uniprot/Q2PRF4", "type": "external" } ], "mass": 36413.0, "length": 315, "protein_name": "Odorant receptor 126-3", "gene_name": "or62c2", "organism": "Zebrafish", "refseq_name": "odorant receptor 126-3", "refseq_ac": [ { "id": "NP_001124271", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001124271", "type": "external" } ], "gene_names_uniprotkb": "or62c2; or126-3; or15.19", "gene_names_refseq": "or126-3; or15.19; or62c2", "protein_names_uniprotkb": "Odorant receptor 126-3", "protein_names_refseq": "Dr3OR15.13; odorant receptor 126-3; odorant receptor, family E, subfamily 126, member 3", "tax_id": 7955, "disease": "", "pathway": " (dre:100148070)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "15824306;16332259;20333175;21834959;26108469;29551974;32295537;36944644", "class_list": "", "function": "PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from DQ306068.1. On Aug 6, 2008 this sequence version replaced XP_001919427.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NJ12", "ec_number_list": [], "go_molecular_function": "GO:0004930 G protein-coupled receptor activity;GO:0004984 olfactory receptor activity;GO:0005549 odorant binding", "go_cellular_component": "GO:0005886 plasma membrane;GO:0016020 membrane", "go_biological_process": "GO:0050911 detection of chemical stimulus involved in sensory perception of smell", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "Q2PRF4-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q2PRF5-1", "uniprot_id": [ { "id": "Q2PRF5_DANRE", "url": "https://www.uniprot.org/uniprot/Q2PRF5", "type": "external" } ], "mass": 35737.0, "length": 311, "protein_name": "Olfactory receptor", "gene_name": "or62c6", "organism": "Zebrafish", "refseq_name": "odorant receptor 126-2", "refseq_ac": [ { "id": "NP_001121869", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001121869", "type": "external" } ], "gene_names_uniprotkb": "or62c6; or126-2; or15.18", "gene_names_refseq": "or126-2; or15.18; or62c6", "protein_names_uniprotkb": "Olfactory receptor", "protein_names_refseq": "Dr3OR15.12; odorant receptor 126-2; odorant receptor, family E, subfamily 126, member 2", "tax_id": 7955, "disease": "", "pathway": " (dre:100150027)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "15824306;16332259;20333175;26108469", "class_list": "", "function": "PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from DQ306067.1. On Jul 31, 2008 this sequence version replaced XP_001920898.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8N7UZ22", "ec_number_list": [], "go_molecular_function": "GO:0004930 G protein-coupled receptor activity;GO:0004984 olfactory receptor activity;GO:0005549 odorant binding", "go_cellular_component": "GO:0005886 plasma membrane;GO:0016020 membrane", "go_biological_process": "GO:0050911 detection of chemical stimulus involved in sensory perception of smell", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "Q2PRF5-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q2PRF6-1", "uniprot_id": [ { "id": "Q2PRF6_DANRE", "url": "https://www.uniprot.org/uniprot/Q2PRF6", "type": "external" } ], "mass": 34639.0, "length": 305, "protein_name": "Odorant receptor 128-9", "gene_name": "or64g2", "organism": "Zebrafish", "refseq_name": "odorant receptor 128-9", "refseq_ac": [ { "id": "NP_001122053", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001122053", "type": "external" } ], "gene_names_uniprotkb": "or64g2; or128-9; or15.17", "gene_names_refseq": "or128-9; or15.17; or64g2", "protein_names_uniprotkb": "Odorant receptor 128-9", "protein_names_refseq": "Dr3OR15.11; odorant receptor 128-9; odorant receptor, family E, subfamily 128, member 9", "tax_id": 7955, "disease": "", "pathway": " (dre:100150721)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "15824306;16332259;20333175;26108469;32295537", "class_list": "", "function": "PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from DQ306066.1. On Jul 31, 2008 this sequence version replaced XP_001920887.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8N7UZ31", "ec_number_list": [], "go_molecular_function": "GO:0004930 G protein-coupled receptor activity;GO:0004984 olfactory receptor activity;GO:0005549 odorant binding", "go_cellular_component": "GO:0005886 plasma membrane;GO:0016020 membrane", "go_biological_process": "GO:0050911 detection of chemical stimulus involved in sensory perception of smell", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q2PRF6-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q2PRF7-1", "uniprot_id": [ { "id": "Q2PRF7_DANRE", "url": "https://www.uniprot.org/uniprot/Q2PRF7", "type": "external" } ], "mass": 35107.0, "length": 310, "protein_name": "Odorant receptor 128-8", "gene_name": "or64e1", "organism": "Zebrafish", "refseq_name": "odorant receptor 128-8", "refseq_ac": [ { "id": "NP_001121891", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001121891", "type": "external" } ], "gene_names_uniprotkb": "or64e1; or128-8; or15.16", "gene_names_refseq": "or128-8; or15.16; or64e1", "protein_names_uniprotkb": "Odorant receptor 128-8", "protein_names_refseq": "Dr3OR15.10; odorant receptor 128-8; odorant receptor, family E, subfamily 128, member 8", "tax_id": 7955, "disease": "", "pathway": " (dre:100151410)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "15824306;16332259;20333175;26108469;32295537", "class_list": "", "function": "PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from DQ306065.1. On Jul 31, 2008 this sequence version replaced XP_001920865.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NHK9", "ec_number_list": [], "go_molecular_function": "GO:0004930 G protein-coupled receptor activity;GO:0004984 olfactory receptor activity;GO:0005549 odorant binding", "go_cellular_component": "GO:0005886 plasma membrane;GO:0016020 membrane", "go_biological_process": "GO:0050911 detection of chemical stimulus involved in sensory perception of smell", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q2PRF7-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q2PRF9-1", "uniprot_id": [ { "id": "Q2PRF9_DANRE", "url": "https://www.uniprot.org/uniprot/Q2PRF9", "type": "external" } ], "mass": 34746.0, "length": 305, "protein_name": "Odorant receptor 128-6", "gene_name": "or64f1", "organism": "Zebrafish", "refseq_name": "odorant receptor 128-6", "refseq_ac": [ { "id": "NP_001121861", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001121861", "type": "external" } ], "gene_names_uniprotkb": "or64f1; or128-6; or15.14", "gene_names_refseq": "or128-6; or15.14; or64f1", "protein_names_uniprotkb": "Odorant receptor 128-6", "protein_names_refseq": "Dr3OR15.8; odorant receptor 128-6; odorant receptor, family E, subfamily 128, member 6", "tax_id": 7955, "disease": "", "pathway": " (dre:100149065)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "15824306;16332259;20333175;26108469;32295537", "class_list": "", "function": "PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from DQ306063.1. On Jul 31, 2008 this sequence version replaced XP_001920806.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NHZ9", "ec_number_list": [], "go_molecular_function": "GO:0004930 G protein-coupled receptor activity;GO:0004984 olfactory receptor activity;GO:0005549 odorant binding", "go_cellular_component": "GO:0005886 plasma membrane;GO:0016020 membrane", "go_biological_process": "GO:0050911 detection of chemical stimulus involved in sensory perception of smell", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q2PRF9-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q2PRG1-1", "uniprot_id": [ { "id": "Q2PRG1_DANRE", "url": "https://www.uniprot.org/uniprot/Q2PRG1", "type": "external" } ], "mass": 34727.0, "length": 305, "protein_name": "Odorant receptor 128-4", "gene_name": "or64b1", "organism": "Zebrafish", "refseq_name": "odorant receptor 128-4", "refseq_ac": [ { "id": "NP_001122050", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001122050", "type": "external" } ], "gene_names_uniprotkb": "or64b1; or128-4; or15.12", "gene_names_refseq": "Dr3OR15.6; or128-4; or15.12; or64b1", "protein_names_uniprotkb": "Odorant receptor 128-4", "protein_names_refseq": "odorant receptor 128-4; odorant receptor, family E, subfamily 128, member 4", "tax_id": 7955, "disease": "", "pathway": " (dre:100150503)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "15824306;16332259;20333175;26108469;31403159;32295537;36944644", "class_list": "", "function": "VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000015.1 and DV600418.1. On Jun 17, 2025 this sequence version replaced NP_001122050.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M3ASF0;E9QB49", "ec_number_list": [], "go_molecular_function": "GO:0004930 G protein-coupled receptor activity;GO:0004984 olfactory receptor activity;GO:0005549 odorant binding", "go_cellular_component": "GO:0005886 plasma membrane;GO:0016020 membrane", "go_biological_process": "GO:0050911 detection of chemical stimulus involved in sensory perception of smell", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q2PRG1-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q2PRG2-1", "uniprot_id": [ { "id": "Q2PRG2_DANRE", "url": "https://www.uniprot.org/uniprot/Q2PRG2", "type": "external" } ], "mass": 34347.0, "length": 303, "protein_name": "Odorant receptor 128-3", "gene_name": "or64b4", "organism": "Zebrafish", "refseq_name": "odorant receptor 128-3", "refseq_ac": [ { "id": "NP_001121888", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001121888", "type": "external" } ], "gene_names_uniprotkb": "or64b4; or128-3; or15.11", "gene_names_refseq": "or128-3; or15.11; or64b4", "protein_names_uniprotkb": "Odorant receptor 128-3", "protein_names_refseq": "Dr3OR15.5; odorant receptor 128-3; odorant receptor, family E, subfamily 128, member 3", "tax_id": 7955, "disease": "", "pathway": " (dre:100151171)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "15824306;16332259;20333175;26108469;32295537", "class_list": "", "function": "PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from DQ306060.1. On Jul 31, 2008 this sequence version replaced XP_001920696.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NHG9", "ec_number_list": [], "go_molecular_function": "GO:0004930 G protein-coupled receptor activity;GO:0004984 olfactory receptor activity;GO:0005549 odorant binding", "go_cellular_component": "GO:0005886 plasma membrane;GO:0016020 membrane", "go_biological_process": "GO:0050911 detection of chemical stimulus involved in sensory perception of smell", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q2PRG2-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q2PRG3-1", "uniprot_id": [ { "id": "Q2PRG3_DANRE", "url": "https://www.uniprot.org/uniprot/Q2PRG3", "type": "external" } ], "mass": 34640.0, "length": 305, "protein_name": "Odorant receptor 128-2", "gene_name": "or64b3", "organism": "Zebrafish", "refseq_name": "odorant receptor 128-2", "refseq_ac": [ { "id": "NP_001121847", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001121847", "type": "external" } ], "gene_names_uniprotkb": "or64b3; or128-2; or15.10", "gene_names_refseq": "or128-2; or15.10; or64b3", "protein_names_uniprotkb": "Odorant receptor 128-2", "protein_names_refseq": "Dr3OR15.4; odorant receptor 128-2; odorant receptor, family E, subfamily 128, member 2", "tax_id": 7955, "disease": "", "pathway": " (dre:100148071)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "15824306;16332259;20333175;26108469;32295537", "class_list": "", "function": "PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from DQ306059.1. On Jul 31, 2008 this sequence version replaced XP_001920680.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NHH0", "ec_number_list": [], "go_molecular_function": "GO:0004930 G protein-coupled receptor activity;GO:0004984 olfactory receptor activity;GO:0005549 odorant binding", "go_cellular_component": "GO:0005886 plasma membrane;GO:0016020 membrane", "go_biological_process": "GO:0050911 detection of chemical stimulus involved in sensory perception of smell", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q2PRG3-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q2PRG6-1", "uniprot_id": [ { "id": "Q2PRG6_DANRE", "url": "https://www.uniprot.org/uniprot/Q2PRG6", "type": "external" } ], "mass": 35719.0, "length": 314, "protein_name": "Olfactory receptor", "gene_name": "or64a1", "organism": "Zebrafish", "refseq_name": "odorant receptor 127-1", "refseq_ac": [ { "id": "NP_001121876", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001121876", "type": "external" } ], "gene_names_uniprotkb": "or64a1; or127-1; or15.7", "gene_names_refseq": "or127-1; or15.7; or64a1", "protein_names_uniprotkb": "Olfactory receptor", "protein_names_refseq": "Dr3OR7.1; odorant receptor 127-1; odorant receptor, family E, subfamily 127, member 1", "tax_id": 7955, "disease": "", "pathway": " (dre:100150287)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "15824306;16332259;20333175;21834959;26108469;32295537", "class_list": "", "function": "PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from DQ306056.1. On Jul 31, 2008 this sequence version replaced XP_001920629.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8N7UZ23;A0AC58H9T9", "ec_number_list": [], "go_molecular_function": "GO:0004930 G protein-coupled receptor activity;GO:0004984 olfactory receptor activity;GO:0005549 odorant binding", "go_cellular_component": "GO:0005886 plasma membrane;GO:0016020 membrane", "go_biological_process": "GO:0050911 detection of chemical stimulus involved in sensory perception of smell", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q2PRG6-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q2PRG9-1", "uniprot_id": [ { "id": "Q2PRG9_DANRE", "url": "https://www.uniprot.org/uniprot/Q2PRG9", "type": "external" } ], "mass": 35024.0, "length": 310, "protein_name": "Odorant receptor 137-4", "gene_name": "or90e2", "organism": "Zebrafish", "refseq_name": "odorant receptor 137-4", "refseq_ac": [ { "id": "NP_001122033", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001122033", "type": "external" } ], "gene_names_uniprotkb": "or90e2; or11.12; or137-4", "gene_names_refseq": "or11.12; or137-4; or90e2", "protein_names_uniprotkb": "Odorant receptor 137-4", "protein_names_refseq": "odorant receptor 137-4; odorant receptor, family H, subfamily 137, member 4", "tax_id": 7955, "disease": "", "pathway": " (dre:100148395)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "16332259;20333175;26108469;32295537", "class_list": "", "function": "PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from DQ306053.1. On Jul 31, 2008 this sequence version replaced XP_001923219.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M3ATQ8;E7F3C0", "ec_number_list": [], "go_molecular_function": "GO:0004993 G protein-coupled serotonin receptor activity;GO:0030594 neurotransmitter receptor activity;GO:0051378 serotonin binding", "go_cellular_component": "GO:0005886 plasma membrane;GO:0030425 dendrite;GO:0045202 synapse", "go_biological_process": "GO:0007187 G protein-coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger;GO:0007268 chemical synaptic transmission;GO:0007198 adenylate cyclase-inhibiting serotonin receptor signaling pathway", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "Q2PRG9-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q2PRH1-1", "uniprot_id": [ { "id": "Q2PRH1_DANRE", "url": "https://www.uniprot.org/uniprot/Q2PRH1", "type": "external" } ], "mass": 36214.0, "length": 315, "protein_name": "Odorant receptor 134-1", "gene_name": "or90a1", "organism": "Zebrafish", "refseq_name": "odorant receptor 134-1", "refseq_ac": [ { "id": "NP_001082920", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001082920", "type": "external" } ], "gene_names_uniprotkb": "or90a1; or11.17; or11.18; or134-1", "gene_names_refseq": "or11.17; or11.18; or134-1; or90a1", "protein_names_uniprotkb": "Odorant receptor 134-1", "protein_names_refseq": "odorant receptor 134-1; odorant receptor, family H, subfamily 134, member 1", "tax_id": 7955, "disease": "", "pathway": " (dre:100001167)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "16332259;20333175;21834959;26108469;27773705;32295537", "class_list": "", "function": "PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from DQ306048.1. On May 23, 2007 this sequence version replaced XP_001341224.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M3B0S5", "ec_number_list": [], "go_molecular_function": "GO:0004930 G protein-coupled receptor activity;GO:0004984 olfactory receptor activity;GO:0005549 odorant binding", "go_cellular_component": "GO:0016020 membrane", "go_biological_process": "GO:0050911 detection of chemical stimulus involved in sensory perception of smell", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q2PRH1-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q2PRH3-1", "uniprot_id": [ { "id": "Q2PRH3_DANRE", "url": "https://www.uniprot.org/uniprot/Q2PRH3", "type": "external" } ], "mass": 35278.0, "length": 314, "protein_name": "Odorant receptor 137-2", "gene_name": "or90b1", "organism": "Zebrafish", "refseq_name": "odorant receptor 137-2", "refseq_ac": [ { "id": "NP_001121859", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001121859", "type": "external" } ], "gene_names_uniprotkb": "or90b1; or11.5; or137-2", "gene_names_refseq": "or11.5; or137-2; or90b1", "protein_names_uniprotkb": "Odorant receptor 137-2", "protein_names_refseq": "Dr3OR7.4; odorant receptor 137-2; odorant receptor, family H, subfamily 137, member 2", "tax_id": 7955, "disease": "", "pathway": " (dre:100148884)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "15824306;16332259;20333175;26108469;32295537", "class_list": "", "function": "PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from DQ306045.1. On Jul 31, 2008 this sequence version replaced XP_001923202.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NK20", "ec_number_list": [], "go_molecular_function": "GO:0004993 G protein-coupled serotonin receptor activity;GO:0030594 neurotransmitter receptor activity;GO:0051378 serotonin binding", "go_cellular_component": "GO:0005886 plasma membrane;GO:0030425 dendrite;GO:0045202 synapse", "go_biological_process": "GO:0007187 G protein-coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger;GO:0007268 chemical synaptic transmission;GO:0007198 adenylate cyclase-inhibiting serotonin receptor signaling pathway", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q2PRH3-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q2PRH4-1", "uniprot_id": [ { "id": "Q2PRH4_DANRE", "url": "https://www.uniprot.org/uniprot/Q2PRH4", "type": "external" } ], "mass": 35489.0, "length": 310, "protein_name": "Odorant receptor 137-1", "gene_name": "or90d3", "organism": "Zebrafish", "refseq_name": "odorant receptor 137-1", "refseq_ac": [ { "id": "NP_001121848", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001121848", "type": "external" } ], "gene_names_uniprotkb": "or90d3; or11.6; or137-1", "gene_names_refseq": "or11.6; or137-1; or90d3", "protein_names_uniprotkb": "Odorant receptor 137-1", "protein_names_refseq": "Dr3OR7.3; odorant receptor 137-1; odorant receptor, family H, subfamily 137, member 1", "tax_id": 7955, "disease": "", "pathway": " (dre:100148137)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "15824306;16332259;17301169;20333175;26108469;32295537", "class_list": "", "function": "PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from DQ306044.1. On Jul 31, 2008 this sequence version replaced XP_001923205.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8N7UZ19", "ec_number_list": [], "go_molecular_function": "GO:0004930 G protein-coupled receptor activity;GO:0004984 olfactory receptor activity;GO:0005549 odorant binding", "go_cellular_component": "GO:0016020 membrane", "go_biological_process": "GO:0050911 detection of chemical stimulus involved in sensory perception of smell", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q2PRH4-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q2PRH7-1", "uniprot_id": [ { "id": "Q2PRH7_DANRE", "url": "https://www.uniprot.org/uniprot/Q2PRH7", "type": "external" } ], "mass": 35330.0, "length": 313, "protein_name": "Odorant receptor 115-5", "gene_name": "or70a15", "organism": "Zebrafish", "refseq_name": "odorant receptor 115-5", "refseq_ac": [ { "id": "NP_001121877", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001121877", "type": "external" } ], "gene_names_uniprotkb": "or70a15; or115-5; or21.51", "gene_names_refseq": "or115-5; or21.51; or70a15", "protein_names_uniprotkb": "Odorant receptor 115-5", "protein_names_refseq": "odorant receptor 115-5; odorant receptor, family F, subfamily 115, member 5", "tax_id": 7955, "disease": "", "pathway": " (dre:100150369)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "16332259;20333175;26108469;26892307;32295537", "class_list": "", "function": "PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from DQ306037.1. On Jul 31, 2008 this sequence version replaced XP_001923153.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NK35", "ec_number_list": [], "go_molecular_function": "GO:0004930 G protein-coupled receptor activity;GO:0004984 olfactory receptor activity;GO:0005549 odorant binding", "go_cellular_component": "GO:0005886 plasma membrane;GO:0016020 membrane", "go_biological_process": "GO:0050911 detection of chemical stimulus involved in sensory perception of smell", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q2PRH7-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q2PRI0-1", "uniprot_id": [ { "id": "Q2PRI0_DANRE", "url": "https://www.uniprot.org/uniprot/Q2PRI0", "type": "external" } ], "mass": 35259.0, "length": 314, "protein_name": "Odorant receptor 115-8", "gene_name": "or70a16", "organism": "Zebrafish", "refseq_name": "odorant receptor 115-8", "refseq_ac": [ { "id": "NP_001122038", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001122038", "type": "external" } ], "gene_names_uniprotkb": "or70a16; or115-8; or21.45", "gene_names_refseq": "or115-8; or21.45; or70a16", "protein_names_uniprotkb": "Odorant receptor 115-8", "protein_names_refseq": "odorant receptor 115-8; odorant receptor, family F, subfamily 115, member 8", "tax_id": 7955, "disease": "", "pathway": " (dre:100148683)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "16332259;20333175;26108469;29020985;32295537", "class_list": "", "function": "PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from DQ306034.1. On Jul 31, 2008 this sequence version replaced XP_001923134.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M2B8C8", "ec_number_list": [], "go_molecular_function": "GO:0004930 G protein-coupled receptor activity;GO:0004984 olfactory receptor activity;GO:0005549 odorant binding", "go_cellular_component": "GO:0005886 plasma membrane;GO:0016020 membrane", "go_biological_process": "GO:0050911 detection of chemical stimulus involved in sensory perception of smell", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q2PRI0-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q2PRI1-1", "uniprot_id": [ { "id": "Q2PRI1_DANRE", "url": "https://www.uniprot.org/uniprot/Q2PRI1", "type": "external" } ], "mass": 35396.0, "length": 314, "protein_name": "Odorant receptor 115-9", "gene_name": "or70a13", "organism": "Zebrafish", "refseq_name": "odorant receptor 115-9", "refseq_ac": [ { "id": "NP_001122057", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001122057", "type": "external" } ], "gene_names_uniprotkb": "or70a13; or115-9; or21.42", "gene_names_refseq": "or115-9; or21.42; or70a13", "protein_names_uniprotkb": "Odorant receptor 115-9", "protein_names_refseq": "odorant receptor 115-9; odorant receptor, family F, subfamily 115, member 9", "tax_id": 7955, "disease": "", "pathway": " (dre:100151263)", "pathway_count": 1, "publication_count": 3, "publication_id_list": "16332259;20333175;26108469", "class_list": "", "function": "PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from DQ306033.1. On Jul 31, 2008 this sequence version replaced XP_001920306.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M3AMG9", "ec_number_list": [], "go_molecular_function": "GO:0004930 G protein-coupled receptor activity;GO:0004984 olfactory receptor activity;GO:0005549 odorant binding", "go_cellular_component": "GO:0005886 plasma membrane;GO:0016020 membrane", "go_biological_process": "GO:0050911 detection of chemical stimulus involved in sensory perception of smell", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "Q2PRI1-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q2PRI3-1", "uniprot_id": [ { "id": "Q2PRI3_DANRE", "url": "https://www.uniprot.org/uniprot/Q2PRI3", "type": "external" } ], "mass": 34598.0, "length": 305, "protein_name": "Odorant receptor 115-11", "gene_name": "or70a11", "organism": "Zebrafish", "refseq_name": "odorant receptor 115-11", "refseq_ac": [ { "id": "NP_001124278", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001124278", "type": "external" } ], "gene_names_uniprotkb": "or70a11; or115-11; or21.40", "gene_names_refseq": "or115-11; or21.40; or70a11", "protein_names_uniprotkb": "Odorant receptor 115-11", "protein_names_refseq": "odorant receptor 115-11; odorant receptor, family F, subfamily 115, member 11", "tax_id": 7955, "disease": "", "pathway": " (dre:100149635)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "16332259;20333175;26108469;27784643;32295537", "class_list": "", "function": "PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from DQ306031.1. On Aug 6, 2008 this sequence version replaced XP_001919189.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NJ18", "ec_number_list": [], "go_molecular_function": "GO:0004930 G protein-coupled receptor activity;GO:0004984 olfactory receptor activity;GO:0005549 odorant binding", "go_cellular_component": "GO:0005886 plasma membrane;GO:0016020 membrane", "go_biological_process": "GO:0050911 detection of chemical stimulus involved in sensory perception of smell", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q2PRI3-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q2PRI7-1", "uniprot_id": [ { "id": "Q2PRI7_DANRE", "url": "https://www.uniprot.org/uniprot/Q2PRI7", "type": "external" } ], "mass": 36847.0, "length": 322, "protein_name": "Odorant receptor, family H, subfamily 132, member 5", "gene_name": "or92a7", "organism": "Zebrafish", "refseq_name": "odorant receptor, family H, subfamily 132, member 5", "refseq_ac": [ { "id": "NP_001373206", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001373206", "type": "external" } ], "gene_names_uniprotkb": "or92a7; or132-5; or21.28", "gene_names_refseq": "or132-5; or21.28; or92a7", "protein_names_uniprotkb": "Odorant receptor, family H, subfamily 132, member 5", "protein_names_refseq": "odorant receptor, family H, subfamily 132, member 5", "tax_id": 7955, "disease": "", "pathway": " (dre:794363)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "16332259;20333175;26108469;26469318;32295537;32471067", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: EH434671.1, SRR32588729.34263792.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505376 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000021.1. On Jun 25, 2025 this sequence version replaced NP_001373206.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1QH93", "ec_number_list": [], "go_molecular_function": "GO:0004930 G protein-coupled receptor activity;GO:0004984 olfactory receptor activity;GO:0005549 odorant binding", "go_cellular_component": "GO:0016020 membrane", "go_biological_process": "GO:0050911 detection of chemical stimulus involved in sensory perception of smell", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q2PRI7-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q2PRJ4-1", "uniprot_id": [ { "id": "Q2PRJ4_DANRE", "url": "https://www.uniprot.org/uniprot/Q2PRJ4", "type": "external" } ], "mass": 36879.0, "length": 325, "protein_name": "Odorant receptor 109-6", "gene_name": "or109-6", "organism": "Zebrafish", "refseq_name": "odorant receptor 109-6", "refseq_ac": [ { "id": "NP_001121881", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001121881", "type": "external" } ], "gene_names_uniprotkb": "or109-6; OR109-9; or10.8", "gene_names_refseq": "OR109-9; or10.8; or109-6", "protein_names_uniprotkb": "Odorant receptor 109-6", "protein_names_refseq": "Dr3OR10.24; odorant receptor 109-6; odorant receptor, family D, subfamily 109, member 6", "tax_id": 7955, "disease": "", "pathway": " (dre:100150635)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "15824306;16332259;17301169;20333175;26108469;32295537;36944644", "class_list": "", "function": "VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000010.1. On Jul 31, 2008 this sequence version replaced XP_001922146.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q2PRJ8", "ec_number_list": [], "go_molecular_function": "GO:0004930 G protein-coupled receptor activity;GO:0004984 olfactory receptor activity;GO:0005549 odorant binding", "go_cellular_component": "GO:0005886 plasma membrane;GO:0016020 membrane", "go_biological_process": "GO:0050911 detection of chemical stimulus involved in sensory perception of smell", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q2PRJ4-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q2PRJ9-1", "uniprot_id": [ { "id": "Q2PRJ9_DANRE", "url": "https://www.uniprot.org/uniprot/Q2PRJ9", "type": "external" } ], "mass": 37381.0, "length": 329, "protein_name": "Odorant receptor 109-5", "gene_name": "or42a2", "organism": "Zebrafish", "refseq_name": "odorant receptor 109-5", "refseq_ac": [ { "id": "NP_001124279", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001124279", "type": "external" } ], "gene_names_uniprotkb": "or42a2; or10.9; or109-5", "gene_names_refseq": "or10.9; or109-5; or42a2", "protein_names_uniprotkb": "Odorant receptor 109-5", "protein_names_refseq": "odorant receptor 109-5; odorant receptor, family D, subfamily 109, member 5", "tax_id": 7955, "disease": "", "pathway": " (dre:100149914)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "16332259;20333175;26108469;32295537", "class_list": "", "function": "PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from DQ306013.1. On Aug 6, 2008 this sequence version replaced XP_001922163.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NID5;F1QC50", "ec_number_list": [], "go_molecular_function": "GO:0004930 G protein-coupled receptor activity;GO:0004984 olfactory receptor activity;GO:0005549 odorant binding", "go_cellular_component": "GO:0005886 plasma membrane;GO:0016020 membrane", "go_biological_process": "GO:0050911 detection of chemical stimulus involved in sensory perception of smell", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "Q2PRJ9-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q2PRK0-1", "uniprot_id": [ { "id": "Q2PRK0_DANRE", "url": "https://www.uniprot.org/uniprot/Q2PRK0", "type": "external" } ], "mass": 38482.0, "length": 338, "protein_name": "Odorant receptor 109-4", "gene_name": "or42a6", "organism": "Zebrafish", "refseq_name": "odorant receptor 109-4", "refseq_ac": [ { "id": "NP_001122043", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001122043", "type": "external" } ], "gene_names_uniprotkb": "or42a6; or10.10; or109-4", "gene_names_refseq": "or10.10; or109-4; or42a6", "protein_names_uniprotkb": "Odorant receptor 109-4", "protein_names_refseq": "odorant receptor 109-4; odorant receptor, family D, subfamily 109, member 4", "tax_id": 7955, "disease": "", "pathway": " (dre:100149214)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "16332259;20333175;26108469;32295537", "class_list": "", "function": "PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from DQ306012.1. On Jul 31, 2008 this sequence version replaced XP_001922100.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M3B3I0", "ec_number_list": [], "go_molecular_function": "GO:0004930 G protein-coupled receptor activity;GO:0004984 olfactory receptor activity;GO:0005549 odorant binding", "go_cellular_component": "GO:0005886 plasma membrane;GO:0016020 membrane", "go_biological_process": "GO:0050911 detection of chemical stimulus involved in sensory perception of smell", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "Q2PRK0-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q2PRK1-1", "uniprot_id": [ { "id": "Q2PRK1_DANRE", "url": "https://www.uniprot.org/uniprot/Q2PRK1", "type": "external" } ], "mass": 37749.0, "length": 334, "protein_name": "Odorant receptor 109-3", "gene_name": "or42a5", "organism": "Zebrafish", "refseq_name": "odorant receptor 109-3", "refseq_ac": [ { "id": "NP_001122035", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001122035", "type": "external" } ], "gene_names_uniprotkb": "or42a5; or10.11; or109-3", "gene_names_refseq": "or10.11; or109-3; or42a5", "protein_names_uniprotkb": "Odorant receptor 109-3", "protein_names_refseq": "Dr3OR10.20; odorant receptor 109-3; odorant receptor, family D, subfamily 109, member 3", "tax_id": 7955, "disease": "", "pathway": " (dre:100148447)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "15824306;16332259;20333175;32295537", "class_list": "", "function": "PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from DQ306011.1. On Jul 31, 2008 this sequence version replaced XP_001922137.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NI53", "ec_number_list": [], "go_molecular_function": "GO:0004930 G protein-coupled receptor activity;GO:0004984 olfactory receptor activity;GO:0005549 odorant binding", "go_cellular_component": "GO:0005886 plasma membrane;GO:0016020 membrane", "go_biological_process": "GO:0050911 detection of chemical stimulus involved in sensory perception of smell", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "Q2PRK1-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q2PRK3-1", "uniprot_id": [ { "id": "Q2PRK3_DANRE", "url": "https://www.uniprot.org/uniprot/Q2PRK3", "type": "external" } ], "mass": 37134.0, "length": 329, "protein_name": "Odorant receptor 109-1", "gene_name": "or42a1", "organism": "Zebrafish", "refseq_name": "odorant receptor 109-1", "refseq_ac": [ { "id": "NP_001122058", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001122058", "type": "external" } ], "gene_names_uniprotkb": "or42a1; or10.13; or109-1", "gene_names_refseq": "or10.13; or109-1; or42a1", "protein_names_uniprotkb": "Odorant receptor 109-1", "protein_names_refseq": "Dr3OR10.18; odorant receptor 109-1; odorant receptor, family D, subfamily 109, member 1", "tax_id": 7955, "disease": "", "pathway": " (dre:100151522)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "15824306;16332259;20333175;26108469;29020985;32295537", "class_list": "", "function": "PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from DQ306009.1. On Jul 31, 2008 this sequence version replaced XP_001922080.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8N7UZ32;A0AC58GIP6;F1QRF5", "ec_number_list": [], "go_molecular_function": "GO:0004930 G protein-coupled receptor activity;GO:0004984 olfactory receptor activity;GO:0005549 odorant binding", "go_cellular_component": "GO:0005886 plasma membrane;GO:0016020 membrane", "go_biological_process": "GO:0050911 detection of chemical stimulus involved in sensory perception of smell", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q2PRK3-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q2PRK4-1", "uniprot_id": [ { "id": "Q2PRK4_DANRE", "url": "https://www.uniprot.org/uniprot/Q2PRK4", "type": "external" } ], "mass": 36346.0, "length": 318, "protein_name": "Odorant receptor 110-2", "gene_name": "or42b1", "organism": "Zebrafish", "refseq_name": "odorant receptor 110-2", "refseq_ac": [ { "id": "NP_001121883", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001121883", "type": "external" } ], "gene_names_uniprotkb": "or42b1; or10.14; or10.5; or110-2", "gene_names_refseq": "or10.14; or10.5; or110-2; or42b1", "protein_names_uniprotkb": "Odorant receptor 110-2", "protein_names_refseq": "Dr3OR10.17; odorant receptor 110-2; odorant receptor, family D, subfamily 110, member 2", "tax_id": 7955, "disease": "", "pathway": " (dre:100150812)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "15824306;16332259;20333175;21834959;26108469;32295537", "class_list": "", "function": "PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from DQ306008.1. On Jul 31, 2008 this sequence version replaced XP_001922120.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M2BGF4;F1QC79;F1QHI7", "ec_number_list": [], "go_molecular_function": "GO:0004930 G protein-coupled receptor activity;GO:0004984 olfactory receptor activity;GO:0005549 odorant binding", "go_cellular_component": "GO:0005886 plasma membrane;GO:0016020 membrane", "go_biological_process": "GO:0050911 detection of chemical stimulus involved in sensory perception of smell", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q2PRK4-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q2PRK5-1", "uniprot_id": [ { "id": "Q2PRK5_DANRE", "url": "https://www.uniprot.org/uniprot/Q2PRK5", "type": "external" } ], "mass": 36456.0, "length": 319, "protein_name": "Odorant receptor 110-1", "gene_name": "or42b2", "organism": "Zebrafish", "refseq_name": "odorant receptor 110-1", "refseq_ac": [ { "id": "NP_571206", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_571206", "type": "external" } ], "gene_names_uniprotkb": "or42b2; or10.15; or10.5; or110-1; or14.1; or4", "gene_names_refseq": "or10.15; or10.5; or110-1; or14.1; or42b2; or4", "protein_names_uniprotkb": "Odorant receptor 110-1", "protein_names_refseq": "Dr3OR10.16; odorant receptor 110-1; odorant receptor 4; odorant receptor, family 14, member 1; odorant receptor, family D, subfamily 110, member 1", "tax_id": 7955, "disease": "", "pathway": " (dre:30358)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "15824306;16332259;20333175;26108469;29020985;32295537;33355666", "class_list": "", "function": "PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from DQ306007.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0004930 G protein-coupled receptor activity;GO:0004984 olfactory receptor activity;GO:0005549 odorant binding", "go_cellular_component": "GO:0005886 plasma membrane;GO:0016020 membrane", "go_biological_process": "GO:0050911 detection of chemical stimulus involved in sensory perception of smell", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q2PRK5-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q2PRK6-1", "uniprot_id": [ { "id": "Q2PRK6_DANRE", "url": "https://www.uniprot.org/uniprot/Q2PRK6", "type": "external" } ], "mass": 35556.0, "length": 315, "protein_name": "Odorant receptor 106-11", "gene_name": "or80a6", "organism": "Zebrafish", "refseq_name": "odorant receptor 106-11", "refseq_ac": [ { "id": "NP_001243270", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001243270", "type": "external" } ], "gene_names_uniprotkb": "or80a6; Dr3OR10.14; or10.17; or106-11", "gene_names_refseq": "Dr3OR10.14; or10.17; or106-11; or80a6", "protein_names_uniprotkb": "Odorant receptor 106-11", "protein_names_refseq": "odorant receptor 106-11; odorant receptor, family G, subfamily 106, member 11", "tax_id": 7955, "disease": "", "pathway": " (dre:100861446); (R-DRE-381753)", "pathway_count": 2, "publication_count": 6, "publication_id_list": "15824306;16332259;17301169;20333175;32295537;36944644", "class_list": "", "function": "PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from DQ306006.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1P4F2", "ec_number_list": [], "go_molecular_function": "GO:0004930 G protein-coupled receptor activity;GO:0004984 olfactory receptor activity;GO:0005549 odorant binding", "go_cellular_component": "GO:0005886 plasma membrane;GO:0016020 membrane", "go_biological_process": "GO:0050911 detection of chemical stimulus involved in sensory perception of smell", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q2PRK6-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q2PRK7-1", "uniprot_id": [ { "id": "Q2PRK7_DANRE", "url": "https://www.uniprot.org/uniprot/Q2PRK7", "type": "external" } ], "mass": 35592.0, "length": 313, "protein_name": "Odorant receptor 106-10", "gene_name": "or80a10", "organism": "Zebrafish", "refseq_name": "odorant receptor 106-10", "refseq_ac": [ { "id": "NP_001243271", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001243271", "type": "external" } ], "gene_names_uniprotkb": "or80a10; Dr3OR10.13; or10.18; or106-10", "gene_names_refseq": "Dr3OR10.13; or10.18; or106-10; or80a10", "protein_names_uniprotkb": "Odorant receptor 106-10", "protein_names_refseq": "odorant receptor 106-10; odorant receptor, family G, subfamily 106, member 10", "tax_id": 7955, "disease": "", "pathway": " (dre:100861447); (R-DRE-381753)", "pathway_count": 2, "publication_count": 5, "publication_id_list": "15824306;16332259;20333175;26108469;32295537", "class_list": "", "function": "PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. 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The reference sequence was derived from DQ306000.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1P3G9", "ec_number_list": [], "go_molecular_function": "GO:0004930 G protein-coupled receptor activity;GO:0004984 olfactory receptor activity;GO:0005549 odorant binding", "go_cellular_component": "GO:0005886 plasma membrane;GO:0016020 membrane", "go_biological_process": "GO:0050911 detection of chemical stimulus involved in sensory perception of smell", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "Q2PRL2-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q2PRL3-1", "uniprot_id": [ { "id": "Q2PRL3_DANRE", "url": "https://www.uniprot.org/uniprot/Q2PRL3", "type": "external" } ], "mass": 35782.0, "length": 316, "protein_name": "Odorant receptor 106-4", "gene_name": "or80a4", "organism": "Zebrafish", "refseq_name": "odorant receptor 106-4", "refseq_ac": [ { "id": "NP_001243280", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001243280", "type": "external" } ], "gene_names_uniprotkb": "or80a4; Dr3OR10.7; or10.25; or106-4", "gene_names_refseq": "Dr3OR10.7; or10.25; or106-4; or80a4", "protein_names_uniprotkb": "Odorant receptor 106-4", "protein_names_refseq": "odorant receptor 106-4; odorant receptor, family G, subfamily 106, member 4", "tax_id": 7955, "disease": "", "pathway": " (dre:100861456); (R-DRE-381753)", "pathway_count": 2, "publication_count": 4, "publication_id_list": "15824306;16332259;20333175;32295537", "class_list": "", "function": "PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from DQ305999.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NZH3", "ec_number_list": [], "go_molecular_function": "GO:0004930 G protein-coupled receptor activity;GO:0004984 olfactory receptor activity;GO:0005549 odorant binding", "go_cellular_component": "GO:0005886 plasma membrane;GO:0016020 membrane", "go_biological_process": "GO:0050911 detection of chemical stimulus involved in sensory perception of smell", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "Q2PRL3-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q2PRL4-1", "uniprot_id": [ { "id": "Q2PRL4_DANRE", "url": "https://www.uniprot.org/uniprot/Q2PRL4", "type": "external" } ], "mass": 36137.0, "length": 320, "protein_name": "Odorant receptor 106-3", "gene_name": "or80a8", "organism": "Zebrafish", "refseq_name": "odorant receptor 106-3", "refseq_ac": [ { "id": "NP_001243281", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001243281", "type": "external" } ], "gene_names_uniprotkb": "or80a8; Dr3OR10.5; or10.26; or106-3", "gene_names_refseq": "Dr3OR10.5; or10.26; or106-3; or80a8", "protein_names_uniprotkb": "Odorant receptor 106-3", "protein_names_refseq": "odorant receptor 106-3; odorant receptor, family G, subfamily 106, member 3", "tax_id": 7955, "disease": "", "pathway": " (dre:100861457); (R-DRE-381753)", "pathway_count": 2, "publication_count": 4, "publication_id_list": "15824306;16332259;20333175;32295537", "class_list": "", "function": "PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from DQ305998.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1P2J4", "ec_number_list": [], "go_molecular_function": "GO:0004930 G protein-coupled receptor activity;GO:0004984 olfactory receptor activity;GO:0005549 odorant binding", "go_cellular_component": "GO:0005886 plasma membrane;GO:0016020 membrane", "go_biological_process": "GO:0050911 detection of chemical stimulus involved in sensory perception of smell", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "Q2PRL4-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q2PRL5-1", "uniprot_id": [ { "id": "Q2PRL5_DANRE", "url": "https://www.uniprot.org/uniprot/Q2PRL5", "type": "external" } ], "mass": 36194.0, "length": 320, "protein_name": "Odorant receptor 106-2", "gene_name": "or80a1", "organism": "Zebrafish", "refseq_name": "odorant receptor 106-2", "refseq_ac": [ { "id": "NP_001243282", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001243282", "type": "external" } ], "gene_names_uniprotkb": "or80a1; Dr3OR10.4; or10.27; or106-2", "gene_names_refseq": "Dr3OR10.4; or10.27; or106-2; or80a1", "protein_names_uniprotkb": "Odorant receptor 106-2", "protein_names_refseq": "odorant receptor 106-2; odorant receptor, family G, subfamily 106, member 2", "tax_id": 7955, "disease": "", "pathway": " (dre:100861459); (R-DRE-381753)", "pathway_count": 2, "publication_count": 4, "publication_id_list": "15824306;16332259;20333175;32295537", "class_list": "", "function": "PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from DQ305997.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NZ06", "ec_number_list": [], "go_molecular_function": "GO:0004930 G protein-coupled receptor activity;GO:0004984 olfactory receptor activity;GO:0005549 odorant binding", "go_cellular_component": "GO:0005886 plasma membrane;GO:0016020 membrane", "go_biological_process": "GO:0050911 detection of chemical stimulus involved in sensory perception of smell", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "Q2PRL5-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q2PRL6-1", "uniprot_id": [ { "id": "Q2PRL6_DANRE", "url": "https://www.uniprot.org/uniprot/Q2PRL6", "type": "external" } ], "mass": 35983.0, "length": 319, "protein_name": "Odorant receptor 106-1", "gene_name": "or80a13", "organism": "Zebrafish", "refseq_name": "odorant receptor 106-1", "refseq_ac": [ { "id": "NP_001243283", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001243283", "type": "external" } ], "gene_names_uniprotkb": "or80a13; or10.28; or106-1", "gene_names_refseq": "or10.28; or106-1; or80a13", "protein_names_uniprotkb": "Odorant receptor 106-1", "protein_names_refseq": "odorant receptor 106-1; odorant receptor, family G, subfamily 106, member 1", "tax_id": 7955, "disease": "", "pathway": " (R-DRE-381753)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "16332259;20333175;26108469;29020985;32295537;36944644", "class_list": "", "function": "PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from DQ305996.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1P4G0;F1RBB4", "ec_number_list": [], "go_molecular_function": "GO:0004930 G protein-coupled receptor activity;GO:0004984 olfactory receptor activity;GO:0005549 odorant binding", "go_cellular_component": "GO:0005886 plasma membrane;GO:0016020 membrane", "go_biological_process": "GO:0050911 detection of chemical stimulus involved in sensory perception of smell", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q2PRL6-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q2PRL9-1", "uniprot_id": [ { "id": "Q2PRL9_DANRE", "url": "https://www.uniprot.org/uniprot/Q2PRL9", "type": "external" } ], "mass": 36895.0, "length": 327, "protein_name": "Olfactory receptor", "gene_name": "or30bu1", "organism": "Zebrafish", "refseq_name": "odorant receptor 104-1", "refseq_ac": [ { "id": "NP_001082909", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001082909", "type": "external" } ], "gene_names_uniprotkb": "or30bu1; or10.31; or104-1", "gene_names_refseq": "or10.31; or104-1; or30bu1", "protein_names_uniprotkb": "Olfactory receptor", "protein_names_refseq": "Dr3OR10.1; odorant receptor 104-1; odorant receptor, family C, subfamily 104, member 1", "tax_id": 7955, "disease": "", "pathway": " (dre:795582)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "15824306;16332259;20333175;21834959;32295537;36944644", "class_list": "", "function": "PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from DQ305993.1. On May 24, 2007 this sequence version replaced XP_001333448.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1ND48", "ec_number_list": [], "go_molecular_function": "GO:0004930 G protein-coupled receptor activity;GO:0004984 olfactory receptor activity;GO:0005549 odorant binding", "go_cellular_component": "GO:0005886 plasma membrane;GO:0016020 membrane", "go_biological_process": "GO:0050911 detection of chemical stimulus involved in sensory perception of smell", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q2PRL9-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q2PRM1-1", "uniprot_id": [ { "id": "Q2PRM1_DANRE", "url": "https://www.uniprot.org/uniprot/Q2PRM1", "type": "external" } ], "mass": 35484.0, "length": 310, "protein_name": "Olfactory receptor", "gene_name": "or61b1", "organism": "Zebrafish", "refseq_name": "odorant receptor 124-3", "refseq_ac": [ { "id": "NP_001124286", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001124286", "type": "external" } ], "gene_names_uniprotkb": "or61b1; Dr3OR21.4; or124-3; or21.2p; or21.4; si:ch211-51a20.14p; si:ch211-51a20.14", "gene_names_refseq": "Dr3OR21.4; or124-3; or21.2p; or21.4; or61b1; si:ch211-51a20.14p; si:ch211-51a20.14", "protein_names_uniprotkb": "Olfactory receptor", "protein_names_refseq": "odorant receptor 124-3; odorant receptor, family E, subfamily 124, member 3", "tax_id": 7955, "disease": "", "pathway": " (dre:100150837)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "15824306;16332259;20333175;26108469;32295537", "class_list": "", "function": "PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from DQ305990.1. On Aug 6, 2008 this sequence version replaced XP_001921614.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0004930 G protein-coupled receptor activity;GO:0004984 olfactory receptor activity;GO:0005549 odorant binding", "go_cellular_component": "GO:0005886 plasma membrane;GO:0016020 membrane", "go_biological_process": "GO:0050911 detection of chemical stimulus involved in sensory perception of smell", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q2PRM1-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q2PRM3-1", "uniprot_id": [ { "id": "Q2PRM3_DANRE", "url": "https://www.uniprot.org/uniprot/Q2PRM3", "type": "external" } ], "mass": 36749.0, "length": 326, "protein_name": "Olfactory receptor", "gene_name": "or41a1", "organism": "Zebrafish", "refseq_name": "odorant receptor 108-2", "refseq_ac": [ { "id": "NP_001121879", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001121879", "type": "external" } ], "gene_names_uniprotkb": "or41a1; or10.2; or108-2", "gene_names_refseq": "or10.2; or108-2; or41a1", "protein_names_uniprotkb": "Olfactory receptor", "protein_names_refseq": "Dr3OR6.2; odorant receptor 108-2; odorant receptor, family D, subfamily 108, member 2", "tax_id": 7955, "disease": "", "pathway": " (dre:100150395)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "15824306;16332259;20333175;32295537", "class_list": "", "function": "PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from DQ305988.1. On Jul 31, 2008 this sequence version replaced XP_001921912.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NI13", "ec_number_list": [], "go_molecular_function": "GO:0004930 G protein-coupled receptor activity;GO:0004984 olfactory receptor activity;GO:0005549 odorant binding", "go_cellular_component": "GO:0005886 plasma membrane;GO:0016020 membrane", "go_biological_process": "GO:0050911 detection of chemical stimulus involved in sensory perception of smell", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "Q2PRM3-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q2PRM4-1", "uniprot_id": [ { "id": "Q2PRM4_DANRE", "url": "https://www.uniprot.org/uniprot/Q2PRM4", "type": "external" } ], "mass": 36473.0, "length": 321, "protein_name": "Olfactory receptor", "gene_name": "or41a3", "organism": "Zebrafish", "refseq_name": "odorant receptor 108-1", "refseq_ac": [ { "id": "NP_001122041", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001122041", "type": "external" } ], "gene_names_uniprotkb": "or41a3; or10.3; or108-1", "gene_names_refseq": "or10.3; or108-1; or41a3", "protein_names_uniprotkb": "Olfactory receptor", "protein_names_refseq": "odorant receptor 108-1; odorant receptor, family D, subfamily 108, member 1", "tax_id": 7955, "disease": "", "pathway": " (dre:100148965)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "16332259;20333175;24559675;26108469;32295537;36944644", "class_list": "", "function": "PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from DQ305987.1. On Jul 31, 2008 this sequence version replaced XP_001921962.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NI54;F1QLR6", "ec_number_list": [], "go_molecular_function": "GO:0004930 G protein-coupled receptor activity;GO:0004984 olfactory receptor activity;GO:0005549 odorant binding", "go_cellular_component": "GO:0005886 plasma membrane;GO:0016020 membrane", "go_biological_process": "GO:0050911 detection of chemical stimulus involved in sensory perception of smell", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q2PRM4-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q2PRM5-1", "uniprot_id": [ { "id": "Q2PRM5_DANRE", "url": "https://www.uniprot.org/uniprot/Q2PRM5", "type": "external" } ], "mass": 36737.0, "length": 326, "protein_name": "Odorant receptor 106-12", "gene_name": "or80a2", "organism": "Zebrafish", "refseq_name": "odorant receptor 106-12", "refseq_ac": [ { "id": "NP_001243269", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001243269", "type": "external" } ], "gene_names_uniprotkb": "or80a2; Dr3OR10.15; or10.16; or106-12", "gene_names_refseq": "Dr3OR10.15; or10.16; or106-12; or80a2", "protein_names_uniprotkb": "Odorant receptor 106-12", "protein_names_refseq": "odorant receptor 106-12; odorant receptor, family G, subfamily 106, member 12", "tax_id": 7955, "disease": "", "pathway": " (dre:100861444); (R-DRE-381753)", "pathway_count": 2, "publication_count": 4, "publication_id_list": "15824306;16332259;20333175;32295537", "class_list": "", "function": "PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from DQ305986.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1NZ02", "ec_number_list": [], "go_molecular_function": "GO:0004930 G protein-coupled receptor activity;GO:0004984 olfactory receptor activity;GO:0005549 odorant binding", "go_cellular_component": "GO:0005886 plasma membrane;GO:0016020 membrane", "go_biological_process": "GO:0050911 detection of chemical stimulus involved in sensory perception of smell", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "Q2PRM5-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q2WG78-1", "uniprot_id": [ { "id": "DSCR6_DANRE", "url": "https://www.uniprot.org/uniprot/Q2WG78", "type": "external" } ], "mass": 12477.0, "length": 110, "protein_name": "Protein ripply3", "gene_name": "ripply3", "organism": "Zebrafish", "refseq_name": "protein ripply3", "refseq_ac": [ { "id": "NP_001034199", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001034199", "type": "external" } ], "gene_names_uniprotkb": "ripply3; dscr6", "gene_names_refseq": "dscr6; ripply3", "protein_names_uniprotkb": "Protein ripply3; Down syndrome critical region protein 6 homolog", "protein_names_refseq": "down syndrome critical region protein 6 homolog; protein ripply3", "tax_id": 7955, "disease": "", "pathway": " (dre:654448)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "16326386", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC124088.1, SRR26395014.467409.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA708828, SAMN01765705 [ECO:0000348] ##Evidence-Data-END## ##RefSeq-Attributes-START## CDS uses downstream in-frame AUG :: upstream AUG and CDS extension is not conserved ##RefSeq-Attributes-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000010.1. On Jun 8, 2024 this sequence version replaced NP_001034199.2., [RefSeq]; Probable transcriptional regulator involved in developmental processes., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q05AP9", "ec_number_list": [], "go_molecular_function": "GO:0003714 transcription corepressor activity", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0000122 negative regulation of transcription by RNA polymerase II;GO:0006351 DNA-templated transcription;GO:0003139 secondary heart field specification;GO:0009880 embryonic pattern specification", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q2WG78-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q2WG79-1", "uniprot_id": [ { "id": "RIPP2_DANRE", "url": "https://www.uniprot.org/uniprot/Q2WG79", "type": "external" } ], "mass": 13070.0, "length": 109, "protein_name": "Protein ripply2", "gene_name": "ripply2", "organism": "Zebrafish", "refseq_name": "protein ripply2", "refseq_ac": [ { "id": "NP_001034198", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001034198", "type": "external" } ], "gene_names_uniprotkb": "ripply2; si:ch211-152c2.8", "gene_names_refseq": "ripply2", "protein_names_uniprotkb": "Protein ripply2", "protein_names_refseq": "protein ripply2", "tax_id": 7955, "disease": "spondylocostal dysostosis (Disease Ontology:DOID:0050568); spondylocostal dysostosis 6 (Disease Ontology:DOID:0112360)", "pathway": " (dre:654447)", "pathway_count": 1, "publication_count": 3, "publication_id_list": "16326386;23594743;29879477", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: AB212220.1, CT593687.2 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505378, SAMEA3505381 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AB212220.1. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications., [RefSeq]; Plays a role in somitogenesis. Required for somite segregation and establishment of rostrocaudal polarity in somites (By similarity)., [UniProtKB, UniProtKB]; We further showed that somite boundaries that were recovered in tbx6(+/-); ripply1(-/-) embryos were dependent on the function of ripply2, indicating that relative gene dosage between ripply1/2 and tbx6 plays a critical role in the somite formation., [RefSeq, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 2, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A2BHT0", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0000122 negative regulation of transcription by RNA polymerase II;GO:0001756 somitogenesis;GO:0009880 embryonic pattern specification;GO:0032525 somite rostral/caudal axis specification", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "Q2WG79-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q32LR5-1", "uniprot_id": [ { "id": "ASHWN_DANRE", "url": "https://www.uniprot.org/uniprot/Q32LR5", "type": "external" } ], "mass": 24860.0, "length": 227, "protein_name": "tRNA-splicing ligase complex subunit ASW", "gene_name": "im:6907446; si:dkeyp-118h3.6", "organism": "Zebrafish", "refseq_name": "tRNA-splicing ligase complex subunit ASW", "refseq_ac": [ { "id": "NP_001137405", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001137405", "type": "external" } ], "gene_names_uniprotkb": "im:6907446; si:dkeyp-118h3.6", "gene_names_refseq": "fb78e05; im:6907446; si:dkeyp-118h3.6; wu:fb78e05", "protein_names_uniprotkb": "tRNA-splicing ligase complex subunit ASW", "protein_names_refseq": "ashwin; tRNA-splicing ligase complex subunit ASW", "tax_id": 7955, "disease": "", "pathway": " (dre:553393)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "23594743", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC093350.1, GDQQ01007780.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505378, SAMEA3505386 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000009.1. On May 8, 2009 this sequence version replaced XP_692645.2., [RefSeq]; Accessory subunit of the tRNA-splicing ligase complex that acts by directly joining spliced tRNA halves to mature-sized tRNAs by incorporating the precursor-derived splice junction phosphate into the mature tRNA as a canonical 3',5'-phosphodiester. May act as an RNA ligase with broad substrate specificity and may function toward other RNAs., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "B0S7I9;Q566T1", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005634 nucleus;GO:0072669 tRNA-splicing ligase complex", "go_biological_process": "GO:0008033 tRNA processing;GO:0048598 embryonic morphogenesis", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q32LR5-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q32LS6-1", "uniprot_id": [ { "id": "ABHDD_DANRE", "url": "https://www.uniprot.org/uniprot/Q32LS6", "type": "external" } ], "mass": 37901.0, "length": 337, "protein_name": "Protein ABHD13", "gene_name": "abhd13", "organism": "Zebrafish", "refseq_name": "protein ABHD13", "refseq_ac": [ { "id": "NP_001032774", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001032774", "type": "external" } ], "gene_names_uniprotkb": "abhd13; zgc:123286", "gene_names_refseq": "abhd13; zgc:123286", "protein_names_uniprotkb": "Protein ABHD13; 3.-.-.-; Abhydrolase domain-containing protein 13; Alpha/beta hydrolase domain-containing protein 13", "protein_names_refseq": "abhydrolase domain-containing protein 13; alpha/beta hydrolase domain-containing protein 13; protein ABHD13", "tax_id": 7955, "disease": "", "pathway": " (dre:561333)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC109445.1, GDQH01020766.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA4476809 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000009.1. On Dec 10, 2005 this sequence version replaced XP_689832.1., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 1, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0008474 palmitoyl-(protein) hydrolase activity", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q32LS6-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000010000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q32PK2-1", "uniprot_id": [ { "id": "T150B_DANRE", "url": "https://www.uniprot.org/uniprot/Q32PK2", "type": "external" } ], "mass": 26016.0, "length": 232, "protein_name": "Modulator of macroautophagy TMEM150B", "gene_name": "tmem150b", "organism": "Zebrafish", "refseq_name": "modulator of macroautophagy TMEM150B", "refseq_ac": [ { "id": "NP_001032458", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001032458", "type": "external" } ], "gene_names_uniprotkb": "tmem150b; zgc:123244", "gene_names_refseq": "tmem150b; zgc:123244", "protein_names_uniprotkb": "Modulator of macroautophagy TMEM150B; Transmembrane protein 150B", "protein_names_refseq": "modulator of macroautophagy TMEM150B; transmembrane protein 224", "tax_id": 7955, "disease": "", "pathway": " (dre:556933)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC108083.1, GFIL01044900.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505379 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000003.1. On Aug 8, 2023 this sequence version replaced NP_001032458.1., [RefSeq]; Modulator of macroautophagy that causes accumulation of autophagosomes under basal conditions and enhances autophagic flux. Represses cell death and promotes long-term clonogenic survival of cells grown in the absence of glucose in a macroautophagy-independent manner. May have some role in extracellular matrix engulfment or growth factor receptor recycling, both of which can modulate cell survival., [UniProtKB, UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 2, "predicted_n_glycosites": 2, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 2, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0000421 autophagosome membrane;GO:0005886 plasma membrane;GO:0010008 endosome membrane", "go_biological_process": "GO:0006914 autophagy", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q32PK2-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000010000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q32PP9-1", "uniprot_id": [ { "id": "SOX14_DANRE", "url": "https://www.uniprot.org/uniprot/Q32PP9", "type": "external" } ], "mass": 26547.0, "length": 238, "protein_name": "Transcription factor Sox-14", "gene_name": "sox14", "organism": "Zebrafish", "refseq_name": "transcription factor Sox-14", "refseq_ac": [ { "id": "NP_001032769", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001032769", "type": "external" } ], "gene_names_uniprotkb": "sox14; zgc:123197", "gene_names_refseq": "sox14; zgc:123197", "protein_names_uniprotkb": "Transcription factor Sox-14", "protein_names_refseq": "SRY (sex determining region Y)-box 14; SRY-box containing gene 14; transcription factor Sox-14", "tax_id": 7955, "disease": "intestinal cancer (Disease Ontology:DOID:10155)", "pathway": " (dre:557661)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript is intronless :: BC108033.1, GFIL01039318.1 [ECO:0000345] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000006.1. On Dec 10, 2005 this sequence version replaced XP_685850.1., [RefSeq]; Acts as a negative regulator of transcription. May function as a switch in neuronal development (By similarity)., [UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding;GO:0001228 DNA-binding transcription activator activity, RNA polymerase II-specific", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0000122 negative regulation of transcription by RNA polymerase II;GO:0006351 DNA-templated transcription;GO:0045944 positive regulation of transcription by RNA polymerase II;GO:0007420 brain development;GO:0030182 neuron differentiation", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q32PP9-1", "record_type": "protein", "filter_code": "0000000.0000011.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q3B736-1", "uniprot_id": [ { "id": "ATGA1_DANRE", "url": "https://www.uniprot.org/uniprot/Q3B736", "type": "external" } ], "mass": 24906.0, "length": 218, "protein_name": "Autophagy-related protein 101", "gene_name": "atg101", "organism": "Zebrafish", "refseq_name": "autophagy-related protein 101", "refseq_ac": [ { "id": "NP_001032316", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001032316", "type": "external" } ], "gene_names_uniprotkb": "atg101; im:6904812; zgc:123177", "gene_names_refseq": "atg101; im:6904812; zgc:123177", "protein_names_uniprotkb": "Autophagy-related protein 101", "protein_names_refseq": "autophagy-related protein 101", "tax_id": 7955, "disease": "colon cancer (Disease Ontology:DOID:219); cholangiocarcinoma (Disease Ontology:DOID:4947); hepatocellular carcinoma (Disease Ontology:DOID:684)", "pathway": " (dre:567680); (R-DRE-1632852)", "pathway_count": 2, "publication_count": 3, "publication_id_list": "26469318;33329019;36768797", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GFIL01044888.1, BC107836.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505383, SAMEA3505385 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000010.1. On Nov 23, 2005 this sequence version replaced XP_696069.1., [RefSeq]; Autophagy factor required for autophagosome formation., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 3, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0019901 protein kinase binding", "go_cellular_component": "GO:0000407 phagophore assembly site;GO:1990316 Atg1/ULK1 kinase complex", "go_biological_process": "GO:0000045 autophagosome assembly;GO:0006914 autophagy", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "Q3B736-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q3B748-1", "uniprot_id": [ { "id": "LLPH_DANRE", "url": "https://www.uniprot.org/uniprot/Q3B748", "type": "external" } ], "mass": 14491.0, "length": 126, "protein_name": "Protein LLP homolog", "gene_name": "llph", "organism": "Zebrafish", "refseq_name": "protein LLP homolog", "refseq_ac": [ { "id": "NP_001096610", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001096610", "type": "external" } ], "gene_names_uniprotkb": "llph; si:dkey-9a20.7; zgc:123180", "gene_names_refseq": "fa95g03; llph; si:dkey-9a20.7; wu:fa95g03; zgc:123180", "protein_names_uniprotkb": "Protein LLP homolog; Protein LAPS18-like", "protein_names_refseq": "LLP homolog, long-term synaptic facilitation (Aplysia); protein LAPS18-like; protein LLP homolog", "tax_id": 7955, "disease": "", "pathway": " (dre:100003313)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "23594743", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC151963.1, EH543522.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000004.1. On or before Aug 16, 2023 this sequence version replaced NP_001032184.1, XP_001337434.1., [RefSeq]; Regulates dendritic and spine growth and synaptic transmission., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0001099 basal RNA polymerase II transcription machinery binding", "go_cellular_component": "GO:0005730 nucleolus;GO:0005694 chromosome", "go_biological_process": "GO:0060999 positive regulation of dendritic spine development;GO:0097484 dendrite extension", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q3B748-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q3B7G7-1", "uniprot_id": [ { "id": "SR1IP_DANRE", "url": "https://www.uniprot.org/uniprot/Q3B7G7", "type": "external" } ], "mass": 18130.0, "length": 158, "protein_name": "Protein SREK1IP1", "gene_name": "srek1ip1", "organism": "Zebrafish", "refseq_name": "protein SREK1IP1", "refseq_ac": [ { "id": "NP_001032761", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001032761", "type": "external" } ], "gene_names_uniprotkb": "srek1ip1; sfrs12ip1; zgc:123019", "gene_names_refseq": "sfrs12ip1; srek1ip1; zgc:123019", "protein_names_uniprotkb": "Protein SREK1IP1", "protein_names_refseq": "SFRS12-interacting protein 1; protein SFRS12IP1; protein SREK1IP1", "tax_id": 7955, "disease": "", "pathway": " (dre:553315)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC107616.1, CT720598.2 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505371, SAMEA3505388 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000010.1., [RefSeq]; Possible splicing regulator involved in the control of cellular survival., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q5BJC5", "ec_number_list": [], "go_molecular_function": "GO:0008270 zinc ion binding;GO:0003676 nucleic acid binding", "go_cellular_component": "", "go_biological_process": "GO:0006397 mRNA processing;GO:0008380 RNA splicing", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q3B7G7-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q3KRG3-1", "uniprot_id": [ { "id": "TSR2_DANRE", "url": "https://www.uniprot.org/uniprot/Q3KRG3", "type": "external" } ], "mass": 19992.0, "length": 181, "protein_name": "Pre-rRNA-processing protein TSR2 homolog", "gene_name": "tsr2", "organism": "Zebrafish", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "tsr2; chunp6926; dt1p1a10l; zgc:109784", "gene_names_refseq": "", "protein_names_uniprotkb": "Pre-rRNA-processing protein TSR2 homolog", "protein_names_refseq": "", "tax_id": 7955, "disease": "Diamond-Blackfan anemia 14 with mandibulofacial dysostosis (Disease Ontology:DOID:0111897)", "pathway": "", "pathway_count": 0, "publication_count": 1, "publication_id_list": "15520368", "class_list": "", "function": "May be involved in 20S pre-rRNA processing., [UniProtKB, UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q6TH19", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q3KRG3-1", "record_type": "protein", "filter_code": "0000000.0000110.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q3ZB90-1", "uniprot_id": [ { "id": "KBTBC_DANRE", "url": "https://www.uniprot.org/uniprot/Q3ZB90", "type": "external" } ], "mass": 70255.0, "length": 623, "protein_name": "Kelch repeat and BTB domain-containing protein 12", "gene_name": "kbtbd12", "organism": "Zebrafish", "refseq_name": "kelch repeat and BTB domain-containing protein 12", "refseq_ac": [ { "id": "NP_001029089", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001029089", "type": "external" } ], "gene_names_uniprotkb": "kbtbd12; klhdc6; zgc:113365", "gene_names_refseq": "kbtbd12; klhdc6; zgc:113365", "protein_names_uniprotkb": "Kelch repeat and BTB domain-containing protein 12; Kelch domain-containing protein 6", "protein_names_refseq": "kelch domain containing 6; kelch domain-containing protein 6; kelch repeat and BTB domain-containing protein 12", "tax_id": 7955, "disease": "", "pathway": " (dre:559380)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC103489.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505379, SAMEA3505383 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC103489.1. On Oct 1, 2005 this sequence version replaced XP_687806.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:1990756 ubiquitin-like ligase-substrate adaptor activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0031463 Cul3-RING ubiquitin ligase complex", "go_biological_process": "GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q3ZB90-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q498P2-1", "uniprot_id": [ { "id": "RT35_DANRE", "url": "https://www.uniprot.org/uniprot/Q498P2", "type": "external" } ], "mass": 37332.0, "length": 330, "protein_name": "Small ribosomal subunit protein mS35", "gene_name": "mrps35", "organism": "Zebrafish", "refseq_name": "small ribosomal subunit protein mS35 precursor", "refseq_ac": [ { "id": "NP_001026839", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001026839", "type": "external" } ], "gene_names_uniprotkb": "mrps35; zgc:114150", "gene_names_refseq": "im:6894309; mrps35; zgc:114150", "protein_names_uniprotkb": "Small ribosomal subunit protein mS35; 28S ribosomal protein S35, mitochondrial; MRP-S35; S35mt", "protein_names_refseq": "28S ribosomal protein S35, mitochondrial; MRP-S35; S35mt; small ribosomal subunit protein mS35 precursor; small ribosomal subunit protein mS35", "tax_id": 7955, "disease": "", "pathway": " (dre:503880); (R-DRE-5389840); (R-DRE-5419276); (R-DRE-9937383)", "pathway_count": 4, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC100132.1, BC082794.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## ##RefSeq-Attributes-START## gene product(s) localized to mito. :: inferred from homology ##RefSeq-Attributes-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC100132.1. On Aug 15, 2005 this sequence version replaced XP_690570.1., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "Q63ZW1", "ec_number_list": [], "go_molecular_function": "GO:0003735 structural constituent of ribosome", "go_cellular_component": "GO:0005763 mitochondrial small ribosomal subunit", "go_biological_process": "GO:0032543 mitochondrial translation", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q498P2-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q498W5-1", "uniprot_id": [ { "id": "TM198_DANRE", "url": "https://www.uniprot.org/uniprot/Q498W5", "type": "external" } ], "mass": 40856.0, "length": 369, "protein_name": "Transmembrane protein 198", "gene_name": "tmem198ab", "organism": "Zebrafish", "refseq_name": "transmembrane protein 198", "refseq_ac": [ { "id": "NP_001029091", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001029091", "type": "external" } ], "gene_names_uniprotkb": "tmem198ab; tmem198b; tmem198; zgc:112212", "gene_names_refseq": "tmem198ab; tmem198b; tmem198; zgc:112212", "protein_names_uniprotkb": "Transmembrane protein 198", "protein_names_refseq": "transmembrane protein 198-B; transmembrane protein 198b; transmembrane protein 198", "tax_id": 7955, "disease": "", "pathway": " (dre:564608)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "23594743", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GDQQ01032903.1, GDQH01020946.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000006.1. On Oct 1, 2005 this sequence version replaced XP_693030.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M9QFG9", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005886 plasma membrane;GO:0031410 cytoplasmic vesicle;GO:0016020 membrane", "go_biological_process": "GO:0090263 positive regulation of canonical Wnt signaling pathway", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q498W5-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q498Z6-1", "uniprot_id": [ { "id": "RT07_DANRE", "url": "https://www.uniprot.org/uniprot/Q498Z6", "type": "external" } ], "mass": 26514.0, "length": 228, "protein_name": "Small ribosomal subunit protein uS7m", "gene_name": "mrps7", "organism": "Zebrafish", "refseq_name": "small ribosomal subunit protein uS7m precursor", "refseq_ac": [ { "id": "NP_001028768", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001028768", "type": "external" } ], "gene_names_uniprotkb": "mrps7; zgc:110673", "gene_names_refseq": "mrps7; zgc:110673", "protein_names_uniprotkb": "Small ribosomal subunit protein uS7m; 28S ribosomal protein S7, mitochondrial; MRP-S7; S7mt", "protein_names_refseq": "28S ribosomal protein S7, mitochondrial; MRP-S7; S7mt; small ribosomal subunit protein uS7m precursor; small ribosomal subunit protein uS7m", "tax_id": 7955, "disease": "combined oxidative phosphorylation deficiency 34 (Disease Ontology:DOID:0111497)", "pathway": " (R-DRE-5389840); (R-DRE-5419276); (R-DRE-9937383)", "pathway_count": 3, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: EH444800.1, BC100013.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## ##RefSeq-Attributes-START## gene product(s) localized to mito. :: inferred from homology ##RefSeq-Attributes-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000003.1. On Sep 22, 2025 this sequence version replaced XP_073800252.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0003729 mRNA binding;GO:0019843 rRNA binding;GO:0003735 structural constituent of ribosome", "go_cellular_component": "GO:0005763 mitochondrial small ribosomal subunit;GO:0005743 mitochondrial inner membrane;GO:0005840 ribosome", "go_biological_process": "GO:0006412 translation;GO:0032543 mitochondrial translation", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q498Z6-1", "record_type": "protein", "filter_code": "0000000.0000011.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q4KMD3-1", "uniprot_id": [ { "id": "U1SBP_DANRE", "url": "https://www.uniprot.org/uniprot/Q4KMD3", "type": "external" } ], "mass": 24588.0, "length": 208, "protein_name": "U11/U12 small nuclear ribonucleoprotein 35 kDa protein", "gene_name": "snrnp35", "organism": "Zebrafish", "refseq_name": "U11/U12 small nuclear ribonucleoprotein 35 kDa protein", "refseq_ac": [ { "id": "NP_001025412", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001025412", "type": "external" } ], "gene_names_uniprotkb": "snrnp35; u1snrnpbp; zgc:112337", "gene_names_refseq": "snrnp35; zgc:112337", "protein_names_uniprotkb": "U11/U12 small nuclear ribonucleoprotein 35 kDa protein; U1 snRNP-binding protein homolog; U11/U12 snRNP 35 kDa protein", "protein_names_refseq": "U1 snRNP-binding protein homolog; U11/U12 small nuclear ribonucleoprotein 35 kDa protein; U11/U12 snRNP 35 kDa protein", "tax_id": 7955, "disease": "", "pathway": " (R-DRE-72165)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GFIL01039140.1, CV112969.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505377, SAMEA3505383 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000010.1. On Aug 6, 2005 this sequence version replaced XP_698517.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0003729 mRNA binding;GO:0017069 snRNA binding", "go_cellular_component": "GO:0005689 U12-type spliceosomal complex;GO:1990904 ribonucleoprotein complex", "go_biological_process": "GO:0000398 mRNA splicing, via spliceosome", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q4KMD3-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q4KMF4-1", "uniprot_id": [ { "id": "RRP12_DANRE", "url": "https://www.uniprot.org/uniprot/Q4KMF4", "type": "external" } ], "mass": 142933.0, "length": 1283, "protein_name": "RRP12-like protein", "gene_name": "rrp12", "organism": "Zebrafish", "refseq_name": "RRP12-like protein", "refseq_ac": [ { "id": "NP_001025447", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001025447", "type": "external" } ], "gene_names_uniprotkb": "rrp12; zgc:111822", "gene_names_refseq": "im:7142677; im:7149218; rrp12; zgc:111822", "protein_names_uniprotkb": "RRP12-like protein", "protein_names_refseq": "RRP12-like protein", "tax_id": 7955, "disease": "", "pathway": " (dre:563195)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "23594743;41059649", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC098593.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC098593.1. On Aug 7, 2005 this sequence version replaced XP_691648.1., [RefSeq]; Participates in the nucleoplasmic stage of pre-40S ribosomal subunit assembly, functioning as a scaffold for assembly factors and preparing pre-40S particles for export from the nucleus to the cytoplasm., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "Q4KMF4-1", "record_type": "protein", "filter_code": "0000000.0000101.010000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q4KMJ1-1", "uniprot_id": [ { "id": "CHAC2_DANRE", "url": "https://www.uniprot.org/uniprot/Q4KMJ1", "type": "external" } ], "mass": 20762.0, "length": 182, "protein_name": "Putative glutathione-specific gamma-glutamylcyclotransferase 2", "gene_name": "chac2", "organism": "Zebrafish", "refseq_name": "putative glutathione-specific gamma-glutamylcyclotransferase 2", "refseq_ac": [ { "id": "NP_001025128", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001025128", "type": "external" } ], "gene_names_uniprotkb": "chac2; zgc:110055", "gene_names_refseq": "chac2; chac; fj84c08; im:7150709; wu:fj84c08; zgc:110055", "protein_names_uniprotkb": "Putative glutathione-specific gamma-glutamylcyclotransferase 2; 4.3.2.7; Cation transport regulator-like protein 2; Gamma-GCG 2", "protein_names_refseq": "cation transport regulator-like protein 2; gamma-GCG 2; putative glutathione-specific gamma-glutamylcyclotransferase 2", "tax_id": 7955, "disease": "", "pathway": " (dre:557614); (R-DRE-174403)", "pathway_count": 2, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC098541.1, EH453747.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA4476807, SAMEA4476818 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC098541.1. On Jul 30, 2005 this sequence version replaced XP_685799.1., [RefSeq]; Catalyzes the cleavage of glutathione into 5-oxo-L-proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [ { "id": "4.3.2.7", "url": "https://www.rhea-db.org/rhea/?query=ec:4.3.2.7", "type": "external" } ], "go_molecular_function": "GO:0061928 glutathione specific gamma-glutamylcyclotransferase activity", "go_cellular_component": "GO:0005737 cytoplasm", "go_biological_process": "GO:0006751 glutathione catabolic process", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q4KMJ1-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q4QRH7-1", "uniprot_id": [ { "id": "PEX16_DANRE", "url": "https://www.uniprot.org/uniprot/Q4QRH7", "type": "external" } ], "mass": 38555.0, "length": 335, "protein_name": "Peroxisomal membrane protein PEX16", "gene_name": "pex16", "organism": "Zebrafish", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "pex16; im:6894523; zgc:112248", "gene_names_refseq": "", "protein_names_uniprotkb": "Peroxisomal membrane protein PEX16; Peroxin-16; Peroxisomal biogenesis factor 16", "protein_names_refseq": "", "tax_id": 7955, "disease": "peroxisome biogenesis disorder 8A (Disease Ontology:DOID:0080483); Peroxisome biogenesis disorder 8B (Disease Ontology:DOID:0081437)", "pathway": " (dre:573990); (R-DRE-9603798)", "pathway_count": 2, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "Involved in peroxisome biogenesis., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 2, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005778 peroxisomal membrane", "go_biological_process": "GO:0007031 peroxisome organization", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q4QRH7-1", "record_type": "protein", "filter_code": "0000000.0000011.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q4QRJ7-1", "uniprot_id": [ { "id": "EIF2A_DANRE", "url": "https://www.uniprot.org/uniprot/Q4QRJ7", "type": "external" } ], "mass": 64225.0, "length": 580, "protein_name": "Eukaryotic translation initiation factor 2A", "gene_name": "eif2a", "organism": "Zebrafish", "refseq_name": "eukaryotic translation initiation factor 2A", "refseq_ac": [ { "id": "NP_001020341", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001020341", "type": "external" } ], "gene_names_uniprotkb": "eif2a; zgc:110460", "gene_names_refseq": "eif2a; im:7145971; zgc:110460", "protein_names_uniprotkb": "Eukaryotic translation initiation factor 2A; eIF-2A", "protein_names_refseq": "eIF-2A; eukaryotic translation initiation factor 2A", "tax_id": 7955, "disease": "borna disease (Disease Ontology:DOID:5154)", "pathway": " (dre:573991)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "23742890;40044042", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC096815.1, BC165462.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC096815.1., [RefSeq]; Both DrPKZ-A and DrPKZ-B isoforms functionally interact with eIF2alpha and inhibit protein synthesis in Danio rerio., [RefSeq, PubMed]; Functions in the early steps of protein synthesis of a small number of specific mRNAs. Acts by directing the binding of methionyl-tRNAi to 40S ribosomal subunits. In contrast to the eIF-2 complex, it binds methionyl-tRNAi to 40S subunits in a codon-dependent manner, whereas the eIF-2 complex binds methionyl-tRNAi to 40S subunits in a GTP-dependent manner., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 1, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 1, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 1, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 1, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 0, "biomarker_type": "", "glycan_count": 1, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0003729 mRNA binding;GO:0000049 tRNA binding;GO:0043022 ribosome binding;GO:0003743 translation initiation factor activity", "go_cellular_component": "GO:0005850 eukaryotic translation initiation factor 2 complex", "go_biological_process": "GO:0006417 regulation of translation;GO:0006413 translational initiation", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "Q4QRJ7-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0100000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q4V8S3-1", "uniprot_id": [ { "id": "TM242_DANRE", "url": "https://www.uniprot.org/uniprot/Q4V8S3", "type": "external" } ], "mass": 14930.0, "length": 142, "protein_name": "Transmembrane protein 242", "gene_name": "tmem242", "organism": "Zebrafish", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "tmem242; si:dkey-60a16.5", "gene_names_refseq": "", "protein_names_uniprotkb": "Transmembrane protein 242", "protein_names_refseq": "", "tax_id": 7955, "disease": "", "pathway": " (dre:569632)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "23594743", "class_list": "", "function": "Scaffold protein that participates in the c-ring assembly of mitochondrial ATP synthase (F(1)F(0) ATP synthase or complex V) by facilitating the membrane insertion and oligomer formation of the subunit c/ATP5MC3. Participates in the incorporation of the c-ring into vestigial complexes. Additionally influences the incorporation of subunits MT-ATP6, MT-ATP8, ATP5MJ, and ATP5MK in the ATP synthase., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q5SNY1", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005743 mitochondrial inner membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q4V8S3-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q4V8S9-1", "uniprot_id": [ { "id": "BORC7_DANRE", "url": "https://www.uniprot.org/uniprot/Q4V8S9", "type": "external" } ], "mass": 11590.0, "length": 103, "protein_name": "BLOC-1-related complex subunit 7", "gene_name": "borcs7", "organism": "Zebrafish", "refseq_name": "BLOC-1-related complex subunit 7", "refseq_ac": [ { "id": "NP_001035077", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001035077", "type": "external" } ], "gene_names_uniprotkb": "borcs7; si:ch211-67n3.3; zgc:114169", "gene_names_refseq": "borcs7; zgc:114169", "protein_names_uniprotkb": "BLOC-1-related complex subunit 7", "protein_names_refseq": "BLOC-1-related complex subunit 7; UPF0693 protein C10orf32 homolog", "tax_id": 7955, "disease": "neuroaxonal dystrophy (Disease Ontology:DOID:2367); hereditary spastic paraplegia (Disease Ontology:DOID:2476)", "pathway": " (dre:664759)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "23594743", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC097219.1, DT866411.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC097219.1., [RefSeq]; As part of a BORC-like complex may play a role in lysosomes movement and localization at the cell periphery. Associated with the cytosolic face of lysosomes, this complex may couple lysosomes to microtubule plus-end-directed kinesin motor., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 2, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005765 lysosomal membrane;GO:0099078 BORC complex", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q4V8S9-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q4V8T0-1", "uniprot_id": [ { "id": "MIOX_DANRE", "url": "https://www.uniprot.org/uniprot/Q4V8T0", "type": "external" } ], "mass": 32735.0, "length": 278, "protein_name": "Inositol oxygenase", "gene_name": "miox", "organism": "Zebrafish", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "miox; CH73-30N17.2; zgc:114168", "gene_names_refseq": "", "protein_names_uniprotkb": "Inositol oxygenase; 1.13.99.1; MI oxygenase; Myo-inositol oxygenase", "protein_names_refseq": "", "tax_id": 7955, "disease": "", "pathway": " (dre:571850); (R-DRE-1855183)", "pathway_count": 2, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [ { "id": "1.13.99.1", "url": "https://www.rhea-db.org/rhea/?query=ec:1.13.99.1", "type": "external" } ], "go_molecular_function": "GO:0008199 ferric iron binding;GO:0050113 inositol oxygenase activity;GO:0005506 iron ion binding", "go_cellular_component": "GO:0005737 cytoplasm", "go_biological_process": "GO:0019310 inositol catabolic process", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q4V8T0-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q4V8U5-1", "uniprot_id": [ { "id": "ANO10_DANRE", "url": "https://www.uniprot.org/uniprot/Q4V8U5", "type": "external" } ], "mass": 74524.0, "length": 646, "protein_name": "Anoctamin-10", "gene_name": "ano10", "organism": "Zebrafish", "refseq_name": "anoctamin-10", "refseq_ac": [ { "id": "NP_001025377", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001025377", "type": "external" } ], "gene_names_uniprotkb": "ano10; tmem16k; zgc:114140", "gene_names_refseq": "ano10a; ano10; fc37b04; wu:fc37b04; zgc:114140", "protein_names_uniprotkb": "Anoctamin-10; Transmembrane protein 16K", "protein_names_refseq": "anoctamin-10; transmembrane protein 16K", "tax_id": 7955, "disease": "autosomal recessive spinocerebellar ataxia 10 (Disease Ontology:DOID:0050999)", "pathway": " (dre:566425); (R-DRE-2672351)", "pathway_count": 2, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC097195.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505374 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC097195.1. On Aug 6, 2005 this sequence version replaced XP_694786.1., [RefSeq]; Does not exhibit calcium-activated chloride channel (CaCC) activity. Can inhibit the activity of ANO1 (By similarity)., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0005227 calcium-activated cation channel activity", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "GO:1902476 chloride transmembrane transport", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q4V8U5-1", "record_type": "protein", "filter_code": "0000000.0000011.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q4V8W7-1", "uniprot_id": [ { "id": "UBTD1_DANRE", "url": "https://www.uniprot.org/uniprot/Q4V8W7", "type": "external" } ], "mass": 25761.0, "length": 227, "protein_name": "Ubiquitin domain-containing protein 1", "gene_name": "ubtd1", "organism": "Zebrafish", "refseq_name": "ubiquitin domain-containing protein 1", "refseq_ac": [ { "id": "NP_001025436", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001025436", "type": "external" } ], "gene_names_uniprotkb": "ubtd1; zgc:114107", "gene_names_refseq": "ubtd1b; ubtd1; zgc:114107", "protein_names_uniprotkb": "Ubiquitin domain-containing protein 1", "protein_names_refseq": "ubiquitin domain-containing protein 1", "tax_id": 7955, "disease": "", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC097167.1, EH494764.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN01765705 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC097167.1. On Aug 6, 2005 this sequence version replaced XP_700555.1., [RefSeq]; May be involved in the regulation of cellular senescence through a positive feedback loop with TP53., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q4V8W7-1", "record_type": "protein", "filter_code": "0000000.0000000.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q4V8X0-1", "uniprot_id": [ { "id": "TPRA1_DANRE", "url": "https://www.uniprot.org/uniprot/Q4V8X0", "type": "external" } ], "mass": 41703.0, "length": 378, "protein_name": "Transmembrane protein adipocyte-associated 1 homolog", "gene_name": "tpra1", "organism": "Zebrafish", "refseq_name": "transmembrane protein adipocyte-associated 1 homolog", "refseq_ac": [ { "id": "NP_001025422", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001025422", "type": "external" } ], "gene_names_uniprotkb": "tpra1; gpr175; wu:fc75f12; zgc:114103", "gene_names_refseq": "gpr175; tpra1; wu:fc75f12; zgc:114103", "protein_names_uniprotkb": "Transmembrane protein adipocyte-associated 1 homolog; Integral membrane protein GPR175", "protein_names_refseq": "G protein-coupled receptor 175; integral membrane protein GPR175; transmembrane protein adipocyte-associated 1 homolog", "tax_id": 7955, "disease": "", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC097163.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505371, SAMEA3505376 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC097163.1. On Aug 6, 2005 this sequence version replaced XP_699163.1., [RefSeq]", "predicted_glycosites": 3, "predicted_n_glycosites": 3, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 3, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0004930 G protein-coupled receptor activity", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "GO:0007186 G protein-coupled receptor signaling pathway", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q4V8X0-1", "record_type": "protein", "filter_code": "0000000.0000000.100000.000000000000000001.0000000010000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q4V909-1", "uniprot_id": [ { "id": "CCD22_DANRE", "url": "https://www.uniprot.org/uniprot/Q4V909", "type": "external" } ], "mass": 71986.0, "length": 639, "protein_name": "Coiled-coil domain-containing protein 22", "gene_name": "ccdc22", "organism": "Zebrafish", "refseq_name": "coiled-coil domain-containing protein 22", "refseq_ac": [ { "id": "NP_001020656", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001020656", "type": "external" } ], "gene_names_uniprotkb": "ccdc22; zgc:114058", "gene_names_refseq": "ccdc22; zgc:114058", "protein_names_uniprotkb": "Coiled-coil domain-containing protein 22", "protein_names_refseq": "coiled-coil domain containing 22; coiled-coil domain-containing protein 22", "tax_id": 7955, "disease": "Ritscher-Schinzel syndrome 2 (Disease Ontology:DOID:0060572)", "pathway": " (dre:556259); (R-DRE-8951664)", "pathway_count": 2, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC097121.1, BC066534.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC097121.1. On Jul 16, 2005 this sequence version replaced XP_684104.1. Sequence Note: This sequence has been modified as follows: removed 35 bp suspected to be vector contamination from the 3' end., [RefSeq]; May be involved in regulation of NF-kappa-B signaling. May be involved in copper-dependent atp7a trafficking between the trans-Golgi network and vesicles in the cell periphery (By similarity)., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0097602 cullin family protein binding", "go_cellular_component": "GO:0005768 endosome;GO:0005813 centrosome", "go_biological_process": "GO:0015031 protein transport;GO:2000060 positive regulation of ubiquitin-dependent protein catabolic process", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q4V909-1", "record_type": "protein", "filter_code": "0000000.0000011.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q4V921-1", "uniprot_id": [ { "id": "SMI19_DANRE", "url": "https://www.uniprot.org/uniprot/Q4V921", "type": "external" } ], "mass": 12050.0, "length": 104, "protein_name": "Small integral membrane protein 19", "gene_name": "smim19", "organism": "Zebrafish", "refseq_name": "small integral membrane protein 19", "refseq_ac": [ { "id": "NP_001020706", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001020706", "type": "external" } ], "gene_names_uniprotkb": "smim19; zgc:114040", "gene_names_refseq": "smim19; zgc:114040", "protein_names_uniprotkb": "Small integral membrane protein 19", "protein_names_refseq": "UPF0697 protein C8orf40 homolog; small integral membrane protein 19", "tax_id": 7955, "disease": "", "pathway": " (dre:565058)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: EH482896.1, GDQH01016039.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000014.1. On Nov 11, 2010 this sequence version replaced NP_001020706.1. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0016020 membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q4V921-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q4V922-1", "uniprot_id": [ { "id": "GSG1L_DANRE", "url": "https://www.uniprot.org/uniprot/Q4V922", "type": "external" } ], "mass": 34481.0, "length": 304, "protein_name": "Germ cell-specific gene 1-like protein", "gene_name": "gsg1l", "organism": "Zebrafish", "refseq_name": "germ cell-specific gene 1-like protein precursor", "refseq_ac": [ { "id": "NP_001035065", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001035065", "type": "external" } ], "gene_names_uniprotkb": "gsg1l; zgc:114039", "gene_names_refseq": "gsg1l; zgc:114039", "protein_names_uniprotkb": "Germ cell-specific gene 1-like protein; GSG1-like protein", "protein_names_refseq": "GSG1-like protein; germ cell-specific gene 1-like protein precursor; germ cell-specific gene 1-like protein", "tax_id": 7955, "disease": "", "pathway": " (dre:664746)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC097105.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505379, SAMEA4476743 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC097105.1., [RefSeq]; As a component of the AMPAR complex, modifies AMPA receptor (AMPAR) gating., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0098978 glutamatergic synapse;GO:0005886 plasma membrane;GO:0032279 asymmetric synapse", "go_biological_process": "GO:0023051 regulation of signaling;GO:0051049 regulation of transport;GO:0010646 regulation of cell communication", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q4V922-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q4V9P9-1", "uniprot_id": [ { "id": "NOL11_DANRE", "url": "https://www.uniprot.org/uniprot/Q4V9P9", "type": "external" } ], "mass": 78589.0, "length": 708, "protein_name": "Nucleolar protein 11-like", "gene_name": "nol11", "organism": "Zebrafish", "refseq_name": "nucleolar protein 11-like", "refseq_ac": [ { "id": "NP_001025234", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001025234", "type": "external" } ], "gene_names_uniprotkb": "nol11; wu:fb30e03; zgc:109901", "gene_names_refseq": "fa11h01; nol11; wu:fa11h01; wu:fb30e03; zgc:109901", "protein_names_uniprotkb": "Nucleolar protein 11-like", "protein_names_refseq": "nucleolar protein 11-like", "tax_id": 7955, "disease": "", "pathway": " (dre:321700)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC096784.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC096784.1. On Aug 6, 2005 this sequence version replaced XP_693257.1., [RefSeq]; Ribosome biogenesis factor. May be required for both optimal rDNA transcription and pre-rRNA processing (By similarity)., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005730 nucleolus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:1901838 positive regulation of transcription of nucleolar large rRNA by RNA polymerase I;GO:0030490 maturation of SSU-rRNA", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q4V9P9-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q4VBI2-1", "uniprot_id": [ { "id": "IR3IP_DANRE", "url": "https://www.uniprot.org/uniprot/Q4VBI2", "type": "external" } ], "mass": 8886.0, "length": 82, "protein_name": "Immediate early response 3-interacting protein 1", "gene_name": "ier3ip1", "organism": "Zebrafish", "refseq_name": "immediate early response 3-interacting protein 1", "refseq_ac": [ { "id": "NP_001239302", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001239302", "type": "external" } ], "gene_names_uniprotkb": "ier3ip1; zgc:112367", "gene_names_refseq": "HSPC039; ier3ip1; im:6906551; zgc:112367", "protein_names_uniprotkb": "Immediate early response 3-interacting protein 1", "protein_names_refseq": "immediate early response 3-interacting protein 1", "tax_id": 7955, "disease": "", "pathway": " (dre:554110)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: EH552304.1, EH538136.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA4476760 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000010.1, EH490264.1, EH482766.1 and EH552304.1., [RefSeq]; Regulator of endoplasmic reticulum secretion that acts as a key determinant of brain size. Required for secretion of extracellular matrix proteins. Required for correct brain development by depositing sufficient extracellular matrix proteins for tissue integrity and the proliferation of neural progenitors (By similarity). Acts as a regulator of the unfolded protein response (UPR) (By similarity)., [UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0000139 Golgi membrane;GO:0030134 COPII-coated ER to Golgi transport vesicle;GO:0005789 endoplasmic reticulum membrane", "go_biological_process": "GO:0015031 protein transport;GO:0050714 positive regulation of protein secretion;GO:0007420 brain development;GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport;GO:0035265 organ growth", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q4VBI2-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q4VBT2-1", "uniprot_id": [ { "id": "NOC4L_DANRE", "url": "https://www.uniprot.org/uniprot/Q4VBT2", "type": "external" } ], "mass": 60726.0, "length": 525, "protein_name": "Nucleolar complex protein 4 homolog", "gene_name": "noc4l", "organism": "Zebrafish", "refseq_name": "nucleolar complex protein 4 homolog", "refseq_ac": [ { "id": "NP_001019568", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001019568", "type": "external" } ], "gene_names_uniprotkb": "noc4l; cb534; sb:cb534; wu:fb78g04; zgc:110429", "gene_names_refseq": "cb534; noc4l; sb:cb534; wu:fb78g04; zgc:110429", "protein_names_uniprotkb": "Nucleolar complex protein 4 homolog; NOC4 protein homolog; NOC4-like protein; Nucleolar complex-associated protein 4-like protein", "protein_names_refseq": "NOC4 protein homolog; NOC4-like protein; nucleolar complex protein 4 homolog; nucleolar complex-associated protein 4-like protein", "tax_id": 7955, "disease": "", "pathway": " (dre:554096)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC095257.1, BC165709.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC095257.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005730 nucleolus;GO:0031965 nuclear membrane;GO:0030692 Noc4p-Nop14p complex;GO:0032040 small-subunit processome", "go_biological_process": "GO:0042254 ribosome biogenesis", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q4VBT2-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q4VBW0-1", "uniprot_id": [ { "id": "MTX3_DANRE", "url": "https://www.uniprot.org/uniprot/Q4VBW0", "type": "external" } ], "mass": 35227.0, "length": 313, "protein_name": "Metaxin-3", "gene_name": "mtx3", "organism": "Zebrafish", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "mtx3; zgc:109718", "gene_names_refseq": "", "protein_names_uniprotkb": "Metaxin-3; zMTX3", "protein_names_refseq": "", "tax_id": 7955, "disease": "", "pathway": " (dre:402916)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "15087125;28252024", "class_list": "", "function": "Could function in transport of proteins into the mitochondrion., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q6Y0L8", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0001401 SAM complex", "go_biological_process": "GO:0045040 protein insertion into mitochondrial outer membrane;GO:0015031 protein transport;GO:0070096 mitochondrial outer membrane translocase complex assembly;GO:0007005 mitochondrion organization", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "Q4VBW0-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q501X6-1", "uniprot_id": [ { "id": "IKBP1_DANRE", "url": "https://www.uniprot.org/uniprot/Q501X6", "type": "external" } ], "mass": 28063.0, "length": 249, "protein_name": "Interleukin-1 receptor-associated kinase 1-binding protein 1 homolog", "gene_name": "irak1bp1", "organism": "Zebrafish", "refseq_name": "interleukin-1 receptor-associated kinase 1-binding protein 1 homolog", "refseq_ac": [ { "id": "NP_001018607", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001018607", "type": "external" } ], "gene_names_uniprotkb": "irak1bp1; zgc:112481", "gene_names_refseq": "irak1bp1; zgc:112481", "protein_names_uniprotkb": "Interleukin-1 receptor-associated kinase 1-binding protein 1 homolog", "protein_names_refseq": "interleukin-1 receptor-associated kinase 1-binding protein 1 homolog", "tax_id": 7955, "disease": "", "pathway": " (dre:553809)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC095828.1, EH582929.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505372 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC095828.1., [RefSeq]; May be part of a signaling pathway that leads to NF-kappa-B activation., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm", "go_biological_process": "GO:0006955 immune response;GO:0043123 positive regulation of canonical NF-kappaB signal transduction", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q501X6-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q502B0-1", "uniprot_id": [ { "id": "RM41_DANRE", "url": "https://www.uniprot.org/uniprot/Q502B0", "type": "external" } ], "mass": 15240.0, "length": 135, "protein_name": "Large ribosomal subunit protein mL41", "gene_name": "mrpl41", "organism": "Zebrafish", "refseq_name": "large ribosomal subunit protein mL41 precursor", "refseq_ac": [ { "id": "NP_001018603", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001018603", "type": "external" } ], "gene_names_uniprotkb": "mrpl41; zgc:112362", "gene_names_refseq": "mrpl41; zgc:112362", "protein_names_uniprotkb": "Large ribosomal subunit protein mL41; 39S ribosomal protein L41, mitochondrial; L41mt; MRP-L41", "protein_names_refseq": "39S ribosomal protein L41, mitochondrial; L41mt; MRP-L41; large ribosomal subunit protein mL41 precursor; large ribosomal subunit protein mL41", "tax_id": 7955, "disease": "", "pathway": " (dre:553805); (R-DRE-5389840); (R-DRE-5419276); (R-DRE-9937383)", "pathway_count": 4, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC095781.1, CN842032.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## ##RefSeq-Attributes-START## gene product(s) localized to mito. :: inferred from homology ##RefSeq-Attributes-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC095781.1., [RefSeq]; Component of the mitochondrial ribosome large subunit. Also involved in apoptosis and cell cycle (By similarity)., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0003735 structural constituent of ribosome", "go_cellular_component": "GO:0005762 mitochondrial large ribosomal subunit;GO:1990904 ribonucleoprotein complex", "go_biological_process": "GO:0006915 apoptotic process;GO:0006412 translation", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q502B0-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q502C1-1", "uniprot_id": [ { "id": "RT24_DANRE", "url": "https://www.uniprot.org/uniprot/Q502C1", "type": "external" } ], "mass": 18611.0, "length": 163, "protein_name": "Small ribosomal subunit protein uS3m", "gene_name": "mrps24", "organism": "Zebrafish", "refseq_name": "small ribosomal subunit protein uS3m precursor", "refseq_ac": [ { "id": "NP_001018518", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001018518", "type": "external" } ], "gene_names_uniprotkb": "mrps24; zgc:112331", "gene_names_refseq": "mrps24; zgc:112331", "protein_names_uniprotkb": "Small ribosomal subunit protein uS3m; 28S ribosomal protein S24, mitochondrial; MRP-S24; S24mt", "protein_names_refseq": "28S ribosomal protein S24, mitochondrial; MRP-S24; S24mt; small ribosomal subunit protein uS3m precursor; small ribosomal subunit protein uS3m", "tax_id": 7955, "disease": "", "pathway": " (dre:553711); (R-DRE-5389840); (R-DRE-5419276); (R-DRE-9937383)", "pathway_count": 4, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC095767.1, EH612577.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA4476810 [ECO:0000348] ##Evidence-Data-END## ##RefSeq-Attributes-START## gene product(s) localized to mito. :: inferred from homology ##RefSeq-Attributes-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000010.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0003735 structural constituent of ribosome", "go_cellular_component": "GO:0005763 mitochondrial small ribosomal subunit", "go_biological_process": "GO:0032543 mitochondrial translation", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q502C1-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q502E0-1", "uniprot_id": [ { "id": "TM17A_DANRE", "url": "https://www.uniprot.org/uniprot/Q502E0", "type": "external" } ], "mass": 25287.0, "length": 219, "protein_name": "Transmembrane protein 17A", "gene_name": "tmem17a; zgc:112294", "organism": "Zebrafish", "refseq_name": "transmembrane protein 17A", "refseq_ac": [ { "id": "NP_001018513", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001018513", "type": "external" } ], "gene_names_uniprotkb": "tmem17a; zgc:112294; tmem17a; tmem17; zgc:112294", "gene_names_refseq": "tmem17a; tmem17; zgc:112294", "protein_names_uniprotkb": "Transmembrane protein 17A", "protein_names_refseq": "transmembrane protein 17A; transmembrane protein 17", "tax_id": 7955, "disease": "", "pathway": " (dre:553704)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "23594743", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC095738.1, EH455591.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505371, SAMEA3505383 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC095738.1., [RefSeq]; Transmembrane component of the tectonic-like complex, a complex localized at the transition zone of primary cilia and acting as a barrier that prevents diffusion of transmembrane proteins between the cilia and plasma membranes. Required for ciliogenesis and sonic hedgehog/SHH signaling (By similarity)., [UniProtKB]", "predicted_glycosites": 2, "predicted_n_glycosites": 2, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 2, "binding_glycan_count": 0, "secondary_ac_list": "F1QCF1", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0036038 MKS complex;GO:0060170 ciliary membrane;GO:0035869 ciliary transition zone", "go_biological_process": "GO:0060271 cilium assembly;GO:0007224 smoothened signaling pathway;GO:1905515 non-motile cilium assembly", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q502E0-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000010000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q502E4-1", "uniprot_id": [ { "id": "Q502E4_DANRE", "url": "https://www.uniprot.org/uniprot/Q502E4", "type": "external" } ], "mass": 19005.0, "length": 168, "protein_name": "NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial", "gene_name": "ndufs4", "organism": "Zebrafish", "refseq_name": "NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial", "refseq_ac": [ { "id": "NP_001018512", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001018512", "type": "external" } ], "gene_names_uniprotkb": "ndufs4; zgc:112289", "gene_names_refseq": "ndufs4; zgc:112289", "protein_names_uniprotkb": "NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial", "protein_names_refseq": "NADH dehydrogenase (ubiquinone) Fe-S protein 4, (NADH-coenzyme Q reductase); NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial", "tax_id": 7955, "disease": "mitochondrial complex I deficiency (Disease Ontology:DOID:0060536); nuclear type mitochondrial complex I deficiency 1 (Disease Ontology:DOID:0112074); Leigh disease (Disease Ontology:DOID:3652); mitochondrial metabolism disease (Disease Ontology:DOID:700)", "pathway": " (dre:573689); (R-DRE-611105); (R-DRE-6799198)", "pathway_count": 3, "publication_count": 10, "publication_id_list": "22465854;26854857;27189481;27924917;28252024;32806454;33482547;33548715;34141984;35893052", "class_list": "", "function": "Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone., [UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 4, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A5PMJ9;F6PF52", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005739 mitochondrion;GO:0005743 mitochondrial inner membrane;GO:0045271 respiratory chain complex I", "go_biological_process": "GO:0032981 mitochondrial respiratory chain complex I assembly;GO:0022904 respiratory electron transport chain", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "Q502E4-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q502G2-1", "uniprot_id": [ { "id": "T41AA_DANRE", "url": "https://www.uniprot.org/uniprot/Q502G2", "type": "external" } ], "mass": 31507.0, "length": 281, "protein_name": "Transmembrane protein 41A-A", "gene_name": "tmem41aa", "organism": "Zebrafish", "refseq_name": "transmembrane protein 41A-A precursor", "refseq_ac": [ { "id": "NP_001018601", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001018601", "type": "external" } ], "gene_names_uniprotkb": "tmem41aa; si:dkeyp-30d5.3; tmem41a; zgc:112259", "gene_names_refseq": "tmem41aa; tmem41a; zgc:112259", "protein_names_uniprotkb": "Transmembrane protein 41A-A", "protein_names_refseq": "transmembrane protein 41A-A precursor; transmembrane protein 41A-A; transmembrane protein 41a", "tax_id": 7955, "disease": "", "pathway": " (dre:553803)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "23594743", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC095709.1, EE686653.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC095709.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A9C3W2", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0016020 membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q502G2-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true } ]